Psyllid ID: psy11364

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
Protein Sequence
MNFNYKRSTLHFLISVSDHCLTSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKHDK
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccEEcccHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEEEccccccccccEEEEHHccccccEcccccHHHHHcHHHHHHccc
Coil and Loop (DISEMBL)
MNFNYKRSTLHFLISVsdhcltsplsssipgssktkasgsgttggssnhsKLFATCFVCgkqlsnqynLRVHMETHqnafyacsscshvsrsrdalrkhdk
Flexible Loop (DISEMBL)
MNFNYKRSTLHFLISVSDHCLTSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAfyacsscshvsrsrdalrkhdk
Low Complexity Region (SEG)
MNFNYKRSTLHFLISVSDHCltsplsssipgssktkasgsgttggssnhskLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKHDK
Disordered region (IsUnstruct)
*******STLHFLISVSDHCL*****************************KLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSC***************
Disordered Region (DISOPRED)
********************************************************FVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSR********
Disordered Region (DISEMBL)
MNFNYKRSTLHFLISVSDHCLTS***********************SNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSS****************
Disordered Region (DISPRO)
*NFNYKRSTLHFLISVSDHCLT***************************SKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSR********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNFNYKRSTLHFLISVSDHCLTSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKHDK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	101	2.2.26 [Sep-21-2011]
Q91ZD1	312	Protein odd-skipped-relat	yes	N/A	0.782	0.253	0.325	0.0007
Q8N2R0	312	Protein odd-skipped-relat	yes	N/A	0.782	0.253	0.325	0.0008

>sp|Q91ZD1|OSR2_MOUSE Protein odd-skipped-related 2 OS=Mus musculus GN=Osr2 PE=1 SV=1

 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 21  LTSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNA- 79
           L+  L S I G SK       + G   + +K    C  CG+  +  YNL +H  TH +  
Sbjct: 139 LSPGLGSPISGLSKLNPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDER 198

Query: 80  FYACSSCSHVSRSRDALRKH 99
            Y C  C    R +D LR H
Sbjct: 199 PYTCDICHKAFRRQDHLRDH 218

Mus musculus (taxid: 10090)

>sp|Q8N2R0|OSR2_HUMAN Protein odd-skipped-related 2 OS=Homo sapiens GN=OSR2 PE=2 SV=2

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 21  LTSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNA- 79
           L+  L S I G SK       + G   + +K    C  CG+  +  YNL +H  TH +  
Sbjct: 139 LSPGLGSPISGLSKLTPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDER 198

Query: 80  FYACSSCSHVSRSRDALRKH 99
            Y C  C    R +D LR H
Sbjct: 199 PYTCDICHKAFRRQDHLRDH 218

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
193591953	324	PREDICTED: zinc finger protein 131-like	0.762	0.237	0.597	7e-19
195377894	628	GJ13592 [Drosophila virilis] gi|19415488	0.623	0.100	0.682	1e-18
195020144	638	GH14679 [Drosophila grimshawi] gi|193898	0.574	0.090	0.724	2e-18
195129063	650	GI13789 [Drosophila mojavensis] gi|19392	0.574	0.089	0.724	2e-18
194752385	653	GF10955 [Drosophila ananassae] gi|190625	0.495	0.076	0.82	2e-18
170054867	666	conserved hypothetical protein [Culex qu	0.495	0.075	0.8	2e-18
195590068	624	GD12665 [Drosophila simulans] gi|1941967	0.504	0.081	0.803	2e-18
307186839	341	Protein bric-a-brac 2 [Camponotus florid	0.603	0.178	0.730	2e-18
157130500	672	hypothetical protein AaeL_AAEL011779 [Ae	0.495	0.074	0.8	3e-18
195494110	650	GE20067 [Drosophila yakuba] gi|194180799	0.663	0.103	0.647	3e-18

>gi|193591953|ref|XP_001946753.1| PREDICTED: zinc finger protein 131-like isoform 1 [Acyrthosiphon pisum] gi|328715555|ref|XP_003245660.1| PREDICTED: zinc finger protein 131-like isoform 2 [Acyrthosiphon pisum] gi|328715558|ref|XP_003245661.1| PREDICTED: zinc finger protein 131-like isoform 3 [Acyrthosiphon pisum]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 53/77 (68%)

Query: 23  SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYA 82
           +P  + +      + S S      +  SKL+  CF+CGKQLSN YNLRVHMETHQNA YA
Sbjct: 215 APTPTDLVQGPVVQGSQSDNIKSRTPVSKLYTMCFICGKQLSNHYNLRVHMETHQNAQYA 274

Query: 83  CSSCSHVSRSRDALRKH 99
           CS CSHVSRSRDALRKH
Sbjct: 275 CSVCSHVSRSRDALRKH 291

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195377894|ref|XP_002047722.1| GJ13592 [Drosophila virilis] gi|194154880|gb|EDW70064.1| GJ13592 [Drosophila virilis]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 50/63 (79%)

Query: 37  ASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDAL 96
           A    T     ++SKL+ATCF+C KQLSNQYNLRVH+ETHQN  YAC+ CSHVSRS+DAL
Sbjct: 447 AEKMPTANKPPSNSKLYATCFICHKQLSNQYNLRVHLETHQNVRYACNVCSHVSRSKDAL 506

Query: 97  RKH 99
           RKH
Sbjct: 507 RKH 509

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195020144|ref|XP_001985131.1| GH14679 [Drosophila grimshawi] gi|193898613|gb|EDV97479.1| GH14679 [Drosophila grimshawi]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 49/58 (84%)

Query: 42  TTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKH 99
           T     ++SKL+ATCF+C KQLSNQYNLRVH+ETHQN  YAC+ CSHVSRS+DALRKH
Sbjct: 451 TPSKPPSNSKLYATCFICHKQLSNQYNLRVHLETHQNVRYACNVCSHVSRSKDALRKH 508

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195129063|ref|XP_002008978.1| GI13789 [Drosophila mojavensis] gi|193920587|gb|EDW19454.1| GI13789 [Drosophila mojavensis]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 49/58 (84%)

Query: 42  TTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKH 99
           T     ++SKL+ATCF+C KQLSNQYNLRVH+ETHQN  YAC+ CSHVSRS+DALRKH
Sbjct: 466 TPSKPPSNSKLYATCFICHKQLSNQYNLRVHLETHQNVRYACNVCSHVSRSKDALRKH 523

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194752385|ref|XP_001958503.1| GF10955 [Drosophila ananassae] gi|190625785|gb|EDV41309.1| GF10955 [Drosophila ananassae]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/50 (82%), Positives = 46/50 (92%)

Query: 50  SKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKH 99
           SKL+ATCF+C KQLSNQYNLRVH+ETHQN  YAC+ CSHVSRS+DALRKH
Sbjct: 477 SKLYATCFICHKQLSNQYNLRVHLETHQNVRYACNVCSHVSRSKDALRKH 526

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170054867|ref|XP_001863324.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167875011|gb|EDS38394.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/50 (80%), Positives = 46/50 (92%)

Query: 50  SKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKH 99
           +KL+ATCF+C KQLSNQYNLRVH+ETHQN  YAC+ CSHVSRS+DALRKH
Sbjct: 436 TKLYATCFICNKQLSNQYNLRVHLETHQNVRYACTVCSHVSRSKDALRKH 485

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195590068|ref|XP_002084769.1| GD12665 [Drosophila simulans] gi|194196778|gb|EDX10354.1| GD12665 [Drosophila simulans]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/51 (80%), Positives = 47/51 (92%)

Query: 49  HSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKH 99
           +SKL+ATCF+C KQLSNQYNLRVH+ETHQN  YAC+ CSHVSRS+DALRKH
Sbjct: 443 NSKLYATCFICHKQLSNQYNLRVHLETHQNVRYACNVCSHVSRSKDALRKH 493

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307186839|gb|EFN72256.1| Protein bric-a-brac 2 [Camponotus floridanus]

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 2/63 (3%)

Query: 37  ASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDAL 96
           AS SG T  + N S +  TCF+CGKQLSNQYNLRVHMETH N+ Y+C+SCSHVSRSRDAL
Sbjct: 258 ASASGKTSQTYNKSSV--TCFICGKQLSNQYNLRVHMETHSNSSYSCTSCSHVSRSRDAL 315

Query: 97  RKH 99
           RKH
Sbjct: 316 RKH 318

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157130500|ref|XP_001661900.1| hypothetical protein AaeL_AAEL011779 [Aedes aegypti] gi|108871884|gb|EAT36109.1| AAEL011779-PA [Aedes aegypti]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/50 (80%), Positives = 46/50 (92%)

Query: 50  SKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKH 99
           +KL+ATCF+C KQLSNQYNLRVH+ETHQN  YAC+ CSHVSRS+DALRKH
Sbjct: 437 TKLYATCFICNKQLSNQYNLRVHLETHQNVRYACTVCSHVSRSKDALRKH 486

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195494110|ref|XP_002094698.1| GE20067 [Drosophila yakuba] gi|194180799|gb|EDW94410.1| GE20067 [Drosophila yakuba]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 1/68 (1%)

Query: 32  SSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSR 91
           + + K+  +      SN SKL+ATCF+C KQLSNQYNLRVH+ETHQN  YAC+ CSHVSR
Sbjct: 452 ADRDKSLATAPIKPPSN-SKLYATCFICHKQLSNQYNLRVHLETHQNVRYACNVCSHVSR 510

Query: 92  SRDALRKH 99
           S+DALRKH
Sbjct: 511 SKDALRKH 518

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
FB|FBgn0052121	648	CG32121 [Drosophila melanogast	0.475	0.074	0.812	1.8e-17
UNIPROTKB|F1MYX1	598	ZNF782 "Uncharacterized protei	0.455	0.076	0.382	0.00011
UNIPROTKB|K7EQ32	222	ZNF223 "Zinc finger protein 22	0.455	0.207	0.361	0.00014
UNIPROTKB|G3MYG2	666	ZNF782 "Uncharacterized protei	0.455	0.069	0.382	0.00014
ZFIN|ZDB-GENE-080212-4	363	zgc:174311 "zgc:174311" [Danio	0.455	0.126	0.347	0.00016
ZFIN|ZDB-GENE-050208-384	286	si:dkey-1b17.6 "si:dkey-1b17.6	0.465	0.164	0.375	0.00018
UNIPROTKB|Q3KNW1	292	SNAI3 "Zinc finger protein SNA	0.445	0.154	0.434	0.00019
FB|FBgn0030240	889	CG2202 [Drosophila melanogaste	0.465	0.052	0.404	0.0002
ZFIN|ZDB-GENE-060503-255	361	si:dkey-262g12.3 "si:dkey-262g	0.445	0.124	0.413	0.00021
FB|FBgn0024244	81	drm "drumstick" [Drosophila me	0.435	0.543	0.347	0.00021

FB|FBgn0052121 CG32121 [Drosophila melanogaster (taxid:7227)]

 Score = 223 (83.6 bits), Expect = 1.8e-17, P = 1.8e-17
 Identities = 39/48 (81%), Positives = 44/48 (91%)

Query:    52 LFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKH 99
             L+ATCF+C KQLSNQYNLRVH+ETHQN  YAC+ CSHVSRS+DALRKH
Sbjct:   470 LYATCFICHKQLSNQYNLRVHLETHQNVRYACNVCSHVSRSKDALRKH 517

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MYX1 ZNF782 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 18/47 (38%), Positives = 24/47 (51%)

Query:    56 CFVCGKQLSNQYNLRVHMETHQNAF-YACSSCSHVSRSRDALRKHDK 101
             C  CG+  S + NLRVH  TH     Y C +C      + +LR+H K
Sbjct:   544 CNHCGEAFSQKSNLRVHQRTHTGEKPYKCDTCGKTFSQKSSLREHQK 590

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|K7EQ32 ZNF223 "Zinc finger protein 223" [Homo sapiens (taxid:9606)]

 Score = 82 (33.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 17/47 (36%), Positives = 21/47 (44%)

Query:    56 CFVCGKQLSNQYNLRVHMETHQNAF-YACSSCSHVSRSRDALRKHDK 101
             C VCGK+ S   +L+ H   H     + C  C    R R AL  H K
Sbjct:   170 CDVCGKEFSQSLHLQTHQRVHTGEKPFKCEQCGRGFRCRSALTVHCK 216

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|G3MYG2 ZNF782 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 94 (38.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 18/47 (38%), Positives = 24/47 (51%)

Query:    56 CFVCGKQLSNQYNLRVHMETHQNAF-YACSSCSHVSRSRDALRKHDK 101
             C  CG+  S + NLRVH  TH     Y C +C      + +LR+H K
Sbjct:   615 CNHCGEAFSQKSNLRVHQRTHTGEKPYKCDTCGKTFSQKSSLREHQK 661

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-080212-4 zgc:174311 "zgc:174311" [Danio rerio (taxid:7955)]

 Score = 88 (36.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
 Identities = 16/46 (34%), Positives = 26/46 (56%)

Query:    56 CFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKHDK 101
             C  CGK L+++ +++ HMETH    + CS C    + + +L  H K
Sbjct:   308 CDQCGKSLTHKDSIKNHMETHSVECFRCSKCGKDFKHKRSLNTHMK 353

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-050208-384 si:dkey-1b17.6 "si:dkey-1b17.6" [Danio rerio (taxid:7955)]

 Score = 97 (39.2 bits), Expect = 0.00018, P = 0.00018
 Identities = 18/48 (37%), Positives = 26/48 (54%)

Query:    55 TCFVCGKQLSNQYNLRVHMETHQNAF-YACSSCSHVSRSRDALRKHDK 101
             TC  CGK  S ++NL++HM TH     Y CS C +       L+ H++
Sbjct:   214 TCTQCGKSFSRRHNLKLHMRTHTGERPYKCSHCDNRFSKSGNLKTHER 261

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q3KNW1 SNAI3 "Zinc finger protein SNAI3" [Homo sapiens (taxid:9606)]

 Score = 97 (39.2 bits), Expect = 0.00019, P = 0.00019
 Identities = 20/46 (43%), Positives = 24/46 (52%)

Query:    55 TCFVCGKQLSNQYNLRVHMETHQNAF-YACSSCSHVSRSRDALRKH 99
             TC +CGK  S  + L+ H+ TH     YACS CS     R  LR H
Sbjct:   210 TCKICGKAFSRPWLLQGHVRTHTGEKPYACSHCSRAFADRSNLRAH 255

GO:0005507 "copper ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005667 "transcription factor complex" evidence=IEA

FB|FBgn0030240 CG2202 [Drosophila melanogaster (taxid:7227)]

 Score = 103 (41.3 bits), Expect = 0.00020, P = 0.00020
 Identities = 19/47 (40%), Positives = 26/47 (55%)

Query:    55 TCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKHDK 101
             TC  C K+ S++  LR H   H +  YAC +C    R R  LR+H+K
Sbjct:   572 TCEYCSKRFSSKTYLRKHTLLHTDFLYACKTCDETFRERAQLREHEK 618

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-060503-255 si:dkey-262g12.3 "si:dkey-262g12.3" [Danio rerio (taxid:7955)]

 Score = 98 (39.6 bits), Expect = 0.00021, P = 0.00021
 Identities = 19/46 (41%), Positives = 25/46 (54%)

Query:    55 TCFVCGKQLSNQYNLRVHMETH-QNAFYACSSCSHVSRSRDALRKH 99
             TC  CG+ L++Q +L  HM TH +   YACS C      R  L+ H
Sbjct:   252 TCTKCGRNLTSQSSLDAHMRTHTEKKPYACSECGQSFAKRSVLKVH 297

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

FB|FBgn0024244 drm "drumstick" [Drosophila melanogaster (taxid:7227)]

 Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query:    56 CFVCGKQLSNQYNLRVHMETHQNA--FYACSSCSHVSRSRDALRKH 99
             C  C ++ +  YNL +H  TH++    Y+C  C    + RD LR+H
Sbjct:    28 CKYCQRRFTKPYNLMIHERTHKSPEITYSCEVCGKYFKQRDNLRQH 73

GO:0007442 "hindgut morphogenesis" evidence=IMP

GO:0007440 "foregut morphogenesis" evidence=IMP

GO:0016348 "imaginal disc-derived leg joint morphogenesis" evidence=IMP

GO:0048619 "embryonic hindgut morphogenesis" evidence=IMP

GO:0048617 "embryonic foregut morphogenesis" evidence=IMP

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0048565 "digestive tract development" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	101
KOG2462|consensus	279		99.82
KOG2462|consensus	279		99.68
KOG3623|consensus	1007		99.55
KOG3576|consensus	267		99.46
KOG3623|consensus	1007		99.36
PHA02768	55	hypothetical protein; Provisional	99.24
PHA00733	128	hypothetical protein	99.09
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.95
KOG1074|consensus	958		98.95
KOG3576|consensus	267		98.91
KOG1074|consensus	958		98.85
KOG3608|consensus	467		98.59
PHA00732	79	hypothetical protein	98.51
PHA00616	44	hypothetical protein	98.46
KOG3608|consensus	467		98.41
KOG3993|consensus	500		98.32
PHA02768	55	hypothetical protein; Provisional	98.22
PLN03086	567	PRLI-interacting factor K; Provisional	98.15
PHA00733	128	hypothetical protein	98.05
PLN03086	567	PRLI-interacting factor K; Provisional	98.0
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.0
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.92
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.86
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.84
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.72
PHA00616	44	hypothetical protein	97.68
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.48
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.44
PRK04860	160	hypothetical protein; Provisional	97.41
PHA00732	79	hypothetical protein	97.29
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.27
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.25
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.18
smart00355	26	ZnF_C2H2 zinc finger.	97.08
smart00355	26	ZnF_C2H2 zinc finger.	96.91
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.85
KOG3993|consensus	500		96.77
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.69
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.59
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.02
KOG1146|consensus	1406		95.83
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.34
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.05
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.98
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.52
KOG2186|consensus	276		93.06
KOG2893|consensus	341		93.03
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	90.94
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	90.8
COG5189	423	SFP1 Putative transcriptional repressor regulating	90.52
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	89.78
COG5048	467	FOG: Zn-finger [General function prediction only]	89.58
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	89.45
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	88.69
COG4049	65	Uncharacterized protein containing archaeal-type C	86.2
PRK04860	160	hypothetical protein; Provisional	85.41
PHA00626	59	hypothetical protein	85.38
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	85.17
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	83.35
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	80.95
PRK06266	178	transcription initiation factor E subunit alpha; V	80.89
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	80.15

>KOG2462|consensus

Probab=99.82  E-value=4.6e-21  Score=121.90  Aligned_cols=76  Identities=25%  Similarity=0.394  Sum_probs=73.6

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +++|.+||+.|..+.-|+.|.+.+. +|+||.|..|+++|..+++|+.||++|.+ |+|.|..|+|.|...+.|.+|.
T Consensus       187 ~c~C~iCGKaFSRPWLLQGHiRTHT-GEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  187 PCECGICGKAFSRPWLLQGHIRTHT-GEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             CcccccccccccchHHhhccccccc-CCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhh
Confidence            8999999999999999999999988 69999999999999999999999999999 9999999999999999999985

>KOG2462|consensus

Probab=99.68  E-value=8.5e-18  Score=107.15  Aligned_cols=76  Identities=24%  Similarity=0.416  Sum_probs=67.1

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ..+.|+.||+.+.....+..|++.+.   -+++|..|||+|..+.-|+.|+|.|+| |||.|..|+|+|.-+++|..||+
T Consensus       160 ka~~C~~C~K~YvSmpALkMHirTH~---l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ  236 (279)
T KOG2462|consen  160 KAFSCKYCGKVYVSMPALKMHIRTHT---LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ  236 (279)
T ss_pred             ccccCCCCCceeeehHHHhhHhhccC---CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHH
Confidence            36778888888777777777877654   478999999999999999999999999 99999999999999999999974

>KOG3623|consensus

Probab=99.55  E-value=2.3e-16  Score=111.27  Aligned_cols=76  Identities=14%  Similarity=0.235  Sum_probs=70.7

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .|.|+.|.+.|.-.++|..|.=-+. +.|||.|..|.|+|..+-.|..|+|+|.| |||.|+.|+|+|+...+..+||
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHs-GqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHS-GQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhc-CCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            8999999999999999877755444 69999999999999999999999999999 9999999999999999999997

>KOG3576|consensus

Probab=99.46  E-value=8.8e-16  Score=94.62  Aligned_cols=78  Identities=21%  Similarity=0.343  Sum_probs=69.4

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .+.+.|..||+.|.-+.-+..|..-+.. -+.|.|..|||.|.....|++|++.|+| +||+|..|+|+|.+.-+|..|+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~-vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSD-VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccH-HHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            3589999999999888777777776654 6679999999999999999999999999 9999999999999998887775

>KOG3623|consensus

Probab=99.36  E-value=4.4e-14  Score=100.00  Aligned_cols=78  Identities=14%  Similarity=0.206  Sum_probs=62.9

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCC------------CCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccc
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSS------------NHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHV   89 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~------------~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~   89 (101)
                      ..+.|..|...|.....+..|..++            ....|.|+|.+|+|+|..+-.|+.|+|+|.| |||+|+.|+|+
T Consensus       239 ~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKR  318 (1007)
T KOG3623|consen  239 PNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKR  318 (1007)
T ss_pred             CCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccc
Confidence            4788999999886555443221111            1123679999999999999999999999999 99999999999


Q ss_pred             cCChHHHhccc
Q psy11364         90 SRSRDALRKHD  100 (101)
Q Consensus        90 f~~~~~l~~H~  100 (101)
                      |+...+...||
T Consensus       319 FSHSGSySSHm  329 (1007)
T KOG3623|consen  319 FSHSGSYSSHM  329 (1007)
T ss_pred             cccCCcccccc
Confidence            99999988886

>PHA02768 hypothetical protein; Provisional

Probab=99.24  E-value=3.6e-12  Score=63.50  Aligned_cols=43  Identities=19%  Similarity=0.411  Sum_probs=40.5

Q ss_pred             eecccchhhcCCHHHHHHHHHhhCCCCcccccCccccCChHHHh
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALR   97 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~k~f~~~~~l~   97 (101)
                      |.|+.||+.|....+|..|++.|+ +|+.|..|++.|.+.+.|+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceecccceeE
Confidence            789999999999999999999999 8999999999999888775

>PHA00733 hypothetical protein

Probab=99.09  E-value=2.2e-11  Score=71.29  Aligned_cols=78  Identities=14%  Similarity=0.169  Sum_probs=62.8

Q ss_pred             CCCCCCCCCCCCCccCCCCCCC----CCCCCCCCcceecccchhhcCCHHHHHHHHHhhCCCCcccccCccccCChHHHh
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTT----GGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALR   97 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~----~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~k~f~~~~~l~   97 (101)
                      +.++.|.+|.+.+.....+..+    ........++|.|..|++.|.....|..|++.+. .+|.|..|++.|.....|.
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~-~~~~C~~CgK~F~~~~sL~  116 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE-HSKVCPVCGKEFRNTDSTL  116 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCC-cCccCCCCCCccCCHHHHH
Confidence            3588899998887766555443    1123334789999999999999999999998764 6899999999999999999


Q ss_pred             ccc
Q psy11364         98 KHD  100 (101)
Q Consensus        98 ~H~  100 (101)
                      .|+
T Consensus       117 ~H~  119 (128)
T PHA00733        117 DHV  119 (128)
T ss_pred             HHH
Confidence            886

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.95  E-value=6.2e-10  Score=47.74  Aligned_cols=25  Identities=40%  Similarity=0.703  Sum_probs=22.8

Q ss_pred             HHHHHHHhhCC-CCcccccCccccCC
Q psy11364         68 NLRVHMETHQN-AFYACSSCSHVSRS   92 (101)
Q Consensus        68 ~l~~h~~~h~~-kp~~C~~C~k~f~~   92 (101)
                      +|..|+++|++ +||.|+.|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999 99999999999963

...

>KOG1074|consensus

Probab=98.95  E-value=1.2e-10  Score=83.79  Aligned_cols=80  Identities=20%  Similarity=0.316  Sum_probs=65.5

Q ss_pred             CCCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-----CCcccc---cCccccCC
Q psy11364         21 LTSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-----AFYACS---SCSHVSRS   92 (101)
Q Consensus        21 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-----kp~~C~---~C~k~f~~   92 (101)
                      .++|.+|.+|-+....++.|..|-+.+. ++|||+|..||++|.++.+|+.|+.+|-.     .++.|+   +|.+.|..
T Consensus       602 ~TdPNqCiiC~rVlSC~saLqmHyrtHt-GERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn  680 (958)
T KOG1074|consen  602 RTDPNQCIICLRVLSCPSALQMHYRTHT-GERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTN  680 (958)
T ss_pred             cCCccceeeeeecccchhhhhhhhhccc-CcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccc
Confidence            3568889999988888888888888877 58899999999999999999999888864     367788   88888888


Q ss_pred             hHHHhcccC
Q psy11364         93 RDALRKHDK  101 (101)
Q Consensus        93 ~~~l~~H~~  101 (101)
                      .-.|.+|++
T Consensus       681 ~V~lpQhIr  689 (958)
T KOG1074|consen  681 AVTLPQHIR  689 (958)
T ss_pred             cccccceEE
Confidence            777777753

>KOG3576|consensus

Probab=98.91  E-value=2.9e-10  Score=70.53  Aligned_cols=76  Identities=16%  Similarity=0.294  Sum_probs=63.8

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHH-hhC----------C-CCcccccCccccC
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHME-THQ----------N-AFYACSSCSHVSR   91 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~-~h~----------~-kp~~C~~C~k~f~   91 (101)
                      .+.|..||++|.+.-.+..|.+.+. +-+||+|..|+|+|.++..|..|.+ +|.          . |-|.|+.||..-.
T Consensus       145 r~lct~cgkgfndtfdlkrh~rtht-gvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~  223 (267)
T KOG3576|consen  145 RHLCTFCGKGFNDTFDLKRHTRTHT-GVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSE  223 (267)
T ss_pred             HHHHhhccCcccchhhhhhhhcccc-CccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCC
Confidence            6789999999999999999999887 5899999999999999999999976 454          3 7899999998766


Q ss_pred             ChHHHhccc
Q psy11364         92 SRDALRKHD  100 (101)
Q Consensus        92 ~~~~l~~H~  100 (101)
                      ....+..|+
T Consensus       224 ~~e~~~~h~  232 (267)
T KOG3576|consen  224 RPEVYYLHL  232 (267)
T ss_pred             ChhHHHHHH
Confidence            665554443

>KOG1074|consensus

Probab=98.85  E-value=9.1e-10  Score=79.45  Aligned_cols=49  Identities=24%  Similarity=0.497  Sum_probs=46.7

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .|-.|..|.++...++.|+-|.|.|+| +||+|++||++|.++.+|..|+
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~  653 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM  653 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcc
Confidence            467899999999999999999999999 9999999999999999999986

>KOG3608|consensus

Probab=98.59  E-value=1.5e-09  Score=72.15  Aligned_cols=75  Identities=15%  Similarity=0.177  Sum_probs=48.8

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHh-hCC-CCcccccCccccCChHHHhccc
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMET-HQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~-h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .+|+|..|-+.|.++..+..|...+   -+-|+|+.|......++.|.+|++. |.. |||+|+.|++.|.+.+.|.+|.
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv~rH---vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~  312 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHVVRH---VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHV  312 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHh---hhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHH
Confidence            3566666666665555555444332   2346667777667777777777664 555 7888888888888888887774

>PHA00732 hypothetical protein

Probab=98.51  E-value=8.5e-08  Score=51.65  Aligned_cols=38  Identities=24%  Similarity=0.600  Sum_probs=27.9

Q ss_pred             ceecccchhhcCCHHHHHHHHHh-hCCCCcccccCccccCC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMET-HQNAFYACSSCSHVSRS   92 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~-h~~kp~~C~~C~k~f~~   92 (101)
                      ||.|..|++.|.....|..|++. |.  ++.|+.||+.|.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--~~~C~~CgKsF~~   39 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--LTKCPVCNKSYRR   39 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--CCccCCCCCEeCC
Confidence            46788888888888888888763 54  4568888888774

>PHA00616 hypothetical protein

Probab=98.46  E-value=1.2e-07  Score=45.17  Aligned_cols=33  Identities=12%  Similarity=0.281  Sum_probs=30.8

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      ||.|..||+.|.....+..|++.|++ +|+.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            58999999999999999999999999 9998875

>KOG3608|consensus

Probab=98.41  E-value=5e-08  Score=65.07  Aligned_cols=54  Identities=15%  Similarity=0.134  Sum_probs=40.3

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhC
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      .|.|+.|.-+-...+++..|.+..+...+||+|..|.+.+...+.|+.|..+|.
T Consensus       263 ~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  263 CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            677777777777777777777666666777888888887777777777777766

>KOG3993|consensus

Probab=98.32  E-value=3e-08  Score=67.25  Aligned_cols=76  Identities=21%  Similarity=0.298  Sum_probs=58.4

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhC--------C-C---------------
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQ--------N-A---------------   79 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~--------~-k---------------   79 (101)
                      -|.|..|-..+-+.-.|.+|.=... -..-|.|.+|+|+|....+|..|.|+|-        + .               
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RI-V~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRI-VHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCee-EEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            5677777777777767766642211 1234899999999999999999999984        1 2               


Q ss_pred             ----------CcccccCccccCChHHHhccc
Q psy11364         80 ----------FYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        80 ----------p~~C~~C~k~f~~~~~l~~H~  100 (101)
                                -|.|..|+|.|.+...|..|+
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHq  376 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQ  376 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhH
Confidence                      378999999999999999984

>PHA02768 hypothetical protein; Provisional

Probab=98.22  E-value=4.3e-08  Score=48.89  Aligned_cols=44  Identities=14%  Similarity=-0.074  Sum_probs=38.2

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHH
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLR   70 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~   70 (101)
                      .|.|+.||+.|...+.+..|.+++.   ++++|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~---k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN---TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC---CcccCCcccceecccceeE
Confidence            5899999999999999999998865   5889999999998776653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.15  E-value=6.5e-07  Score=63.42  Aligned_cols=61  Identities=13%  Similarity=0.188  Sum_probs=28.1

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCcccc
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVS   90 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f   90 (101)
                      .+.|+.|++.|. .+.+..|..+.+   .++.|+ |++.+ .+..|..|+..|.. +|+.|..|++.+
T Consensus       453 H~~C~~Cgk~f~-~s~LekH~~~~H---kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v  514 (567)
T PLN03086        453 HVHCEKCGQAFQ-QGEMEKHMKVFH---EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMV  514 (567)
T ss_pred             CccCCCCCCccc-hHHHHHHHHhcC---CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCcc
Confidence            445555555553 233333333321   344554 55432 33445555555554 555555555544

>PHA00733 hypothetical protein

Probab=98.05  E-value=2.2e-06  Score=50.24  Aligned_cols=52  Identities=17%  Similarity=0.175  Sum_probs=44.4

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      .|+.|+.||+.|...+.+..|...+   ..++.|..|++.|.....|..|+....
T Consensus        72 kPy~C~~Cgk~Fss~s~L~~H~r~h---~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         72 SPYVCPLCLMPFSSSVSLKQHIRYT---EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCccCCCCCCcCCCHHHHHHHHhcC---CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            4899999999999999888777653   346899999999999999999987543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.00  E-value=4.3e-06  Score=59.39  Aligned_cols=69  Identities=17%  Similarity=0.271  Sum_probs=53.8

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCC----------HHHHHHHHHhhCCCCcccccCccccCC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSN----------QYNLRVHMETHQNAFYACSSCSHVSRS   92 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~----------~~~l~~h~~~h~~kp~~C~~C~k~f~~   92 (101)
                      .++.|+ ||..+ ....+..|...+.. .+++.|..|++.+..          ...|..|......+++.|..||+.+..
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp-~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCP-LRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVML  553 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCC-CCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeee
Confidence            478999 99755 45667778776654 789999999998852          357999998873399999999998876


Q ss_pred             hH
Q psy11364         93 RD   94 (101)
Q Consensus        93 ~~   94 (101)
                      +.
T Consensus       554 rd  555 (567)
T PLN03086        554 KE  555 (567)
T ss_pred             hh
Confidence            53

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.00  E-value=6.3e-06  Score=33.86  Aligned_cols=23  Identities=43%  Similarity=0.868  Sum_probs=15.2

Q ss_pred             eecccchhhcCCHHHHHHHHHhh
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMETH   76 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~h   76 (101)
                      |.|+.|++.|..+..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45667777777777777776653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.92  E-value=4e-06  Score=55.49  Aligned_cols=51  Identities=29%  Similarity=0.503  Sum_probs=43.2

Q ss_pred             Ccceecc--cchhhcCCHHHHHHHHHh-h------------------CC-CCcccccCccccCChHHHhcccC
Q psy11364         51 KLFATCF--VCGKQLSNQYNLRVHMET-H------------------QN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        51 ~~~~~C~--~c~~~~~~~~~l~~h~~~-h------------------~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++||+|+  .|.|.|.....|+-|+.. |                  .. |||+|++|+|++.....|..|++
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            5999996  599999999999999753 2                  04 89999999999999999988863

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.86  E-value=3.2e-06  Score=34.77  Aligned_cols=21  Identities=29%  Similarity=0.733  Sum_probs=19.3

Q ss_pred             cccccCccccCChHHHhcccC
Q psy11364         81 YACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |.|+.|++.|.....|.+|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            689999999999999999974

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.84  E-value=1.8e-05  Score=39.52  Aligned_cols=45  Identities=33%  Similarity=0.470  Sum_probs=33.8

Q ss_pred             ceecccchhhcCCHHHHHHHHH-hhCC--CCcccccCccccCChHHHhccc
Q psy11364         53 FATCFVCGKQLSNQYNLRVHME-THQN--AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~-~h~~--kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .|.|+.|++ ......|..|.. .|..  +.+.|++|...+.  .+|..|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl   49 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHL   49 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHH
Confidence            478999999 556677889965 4665  6899999987644  3777775

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.72  E-value=1.4e-05  Score=34.15  Aligned_cols=22  Identities=32%  Similarity=0.682  Sum_probs=14.0

Q ss_pred             CcccccCccccCChHHHhcccC
Q psy11364         80 FYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ||.|..|++.|.....|..|++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~   22 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKR   22 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHC
T ss_pred             CCCCCccCCccCChhHHHHHhH
Confidence            4566666666666666666653

>PHA00616 hypothetical protein

Probab=97.68  E-value=7.4e-06  Score=39.05  Aligned_cols=22  Identities=23%  Similarity=0.572  Sum_probs=20.4

Q ss_pred             CcccccCccccCChHHHhcccC
Q psy11364         80 FYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ||.|+.||+.|...++|.+|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r   22 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLL   22 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHH
Confidence            7999999999999999999974

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.48  E-value=6.2e-05  Score=32.03  Aligned_cols=25  Identities=36%  Similarity=0.513  Sum_probs=22.5

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      +|.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5899999999999999999997664

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.44  E-value=0.00016  Score=29.45  Aligned_cols=23  Identities=43%  Similarity=0.863  Sum_probs=14.8

Q ss_pred             eecccchhhcCCHHHHHHHHHhh
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMETH   76 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~h   76 (101)
                      |.|+.|++.|.....+..|+..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            46777777777777777777654

...

>PRK04860 hypothetical protein; Provisional

Probab=97.41  E-value=7.7e-05  Score=45.32  Aligned_cols=39  Identities=23%  Similarity=0.494  Sum_probs=33.0

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChH
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRD   94 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~   94 (101)
                      -+|.|. |++   ....+.+|.++|++ ++|.|..|++.|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            468997 987   56678899999999 9999999999887543

>PHA00732 hypothetical protein

Probab=97.29  E-value=5.4e-05  Score=40.78  Aligned_cols=48  Identities=17%  Similarity=0.270  Sum_probs=37.0

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhC
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      |+.|..||+.|...+.+..|......   ++.|..|++.|..   +..|.....
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~~---l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYRR---LNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeCC---hhhhhcccC
Confidence            57899999999999998888763221   3579999999984   778875544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.27  E-value=0.00082  Score=32.93  Aligned_cols=33  Identities=33%  Similarity=0.511  Sum_probs=22.8

Q ss_pred             CCCCcceecccchhhcCCHHHHHHHHHhhCC-CC
Q psy11364         48 NHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AF   80 (101)
Q Consensus        48 ~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp   80 (101)
                      ...+.|..|+.|+..+.+..+|.+|+.++.+ ||
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3346789999999999999999999987766 65

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.25  E-value=0.00012  Score=29.90  Aligned_cols=20  Identities=35%  Similarity=0.783  Sum_probs=16.7

Q ss_pred             cccccCccccCChHHHhccc
Q psy11364         81 YACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |.|+.|++.|.....|..|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~   20 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHM   20 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHH
Confidence            67999999999999999996

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.18  E-value=0.00012  Score=40.37  Aligned_cols=23  Identities=26%  Similarity=0.485  Sum_probs=12.9

Q ss_pred             ceecccchhhcCCHHHHHHHHHh
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMET   75 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~   75 (101)
                      .+.|..|++.|.....|..|++.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHcC
Confidence            35566666666666666666554

>smart00355 ZnF_C2H2 zinc finger

Probab=97.08  E-value=0.00062  Score=27.98  Aligned_cols=24  Identities=38%  Similarity=0.688  Sum_probs=17.8

Q ss_pred             eecccchhhcCCHHHHHHHHHhhC
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      |.|..|++.|.....+..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            457778888888888888877554

>smart00355 ZnF_C2H2 zinc finger

Probab=96.91  E-value=0.00034  Score=28.81  Aligned_cols=21  Identities=38%  Similarity=0.896  Sum_probs=18.7

Q ss_pred             cccccCccccCChHHHhcccC
Q psy11364         81 YACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |.|..|++.|.....|..|++
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH
Confidence            579999999999999998863

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.85  E-value=0.0011  Score=28.19  Aligned_cols=21  Identities=29%  Similarity=0.691  Sum_probs=16.7

Q ss_pred             cccccCccccCChHHHhcccC
Q psy11364         81 YACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |-|..|++.|.....+..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            568888888888888888864

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG3993|consensus

Probab=96.77  E-value=0.00024  Score=48.82  Aligned_cols=48  Identities=21%  Similarity=0.465  Sum_probs=41.9

Q ss_pred             eecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |.|..|...|.....|.+|.-.--. .-|+|++|+|.|.-..+|..|.|
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRR  316 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRR  316 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhc
Confidence            7899999999999999999754444 57999999999999999988875

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.69  E-value=0.00071  Score=28.07  Aligned_cols=20  Identities=30%  Similarity=0.670  Sum_probs=11.6

Q ss_pred             cccccCccccCChHHHhccc
Q psy11364         81 YACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |.|.+|++.|.....+..|+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~   20 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHL   20 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCCCcCCHHHHHHHH
Confidence            34556666666666665554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.59  E-value=0.00059  Score=33.99  Aligned_cols=50  Identities=14%  Similarity=0.251  Sum_probs=33.6

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCC-CCCcceecccchhhcCCHHHHHHHHHhh
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSN-HSKLFATCFVCGKQLSNQYNLRVHMETH   76 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~-~~~~~~~C~~c~~~~~~~~~l~~h~~~h   76 (101)
                      .|.|+.||+.+. ...|..|....+ ...+.+.|+.|...+.  .++..|+..+
T Consensus         2 ~f~CP~C~~~~~-~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPYCGKGFS-ESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CcCCCCCCCccC-HHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            578999999544 455655543332 2345689999997644  4888888754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.02  E-value=0.0049  Score=25.41  Aligned_cols=22  Identities=32%  Similarity=0.688  Sum_probs=19.8

Q ss_pred             eecccchhhcCCHHHHHHHHHh
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMET   75 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~   75 (101)
                      |.|..|++.|..+..+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            6799999999999999999864

>KOG1146|consensus

Probab=95.83  E-value=0.0041  Score=48.25  Aligned_cols=52  Identities=23%  Similarity=0.366  Sum_probs=45.2

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHh-hC------------------------C-CCcccccCccccCChHHHhcccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMET-HQ------------------------N-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~-h~------------------------~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ..+.+.|+.|+..|.....|..|+|. |.                        + +||.|..|...+....+|..|++
T Consensus       462 ~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  462 FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            35779999999999999999999997 11                        3 79999999999999999998863

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.34  E-value=0.0068  Score=29.73  Aligned_cols=22  Identities=32%  Similarity=0.526  Sum_probs=16.3

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .|..|++|+..+.+..+|.+|+
T Consensus        23 ~PatCP~C~a~~~~srnLrRHl   44 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHL   44 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHH
T ss_pred             CCCCCCcchhhccchhhHHHHH
Confidence            7999999999999999999996

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.05  E-value=0.014  Score=26.01  Aligned_cols=19  Identities=16%  Similarity=0.454  Sum_probs=9.1

Q ss_pred             cccccCccccCChHHHhcc
Q psy11364         81 YACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H   99 (101)
                      |-|+.|++.|.....+..|
T Consensus         4 ~~C~~C~~~~~~~~~~~~H   22 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAH   22 (35)
T ss_pred             eEccccCCccCCHHHHHHH
Confidence            4455555555544444444

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.98  E-value=0.033  Score=22.65  Aligned_cols=22  Identities=32%  Similarity=0.582  Sum_probs=15.0

Q ss_pred             eecccchhhcCCHHHHHHHHHhh
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMETH   76 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~h   76 (101)
                      |.|..|..... +..|..|++.+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            56888887776 77888887764

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.52  E-value=0.017  Score=24.10  Aligned_cols=17  Identities=35%  Similarity=0.882  Sum_probs=7.9

Q ss_pred             ecccchhhcCCHHHHHHH
Q psy11364         55 TCFVCGKQLSNQYNLRVH   72 (101)
Q Consensus        55 ~C~~c~~~~~~~~~l~~h   72 (101)
                      .|+.|++.| ....|..|
T Consensus         4 ~C~~CgR~F-~~~~l~~H   20 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKH   20 (25)
T ss_pred             cCCCCCCEE-CHHHHHHH
Confidence            355555555 33334444

>KOG2186|consensus

Probab=93.06  E-value=0.064  Score=34.92  Aligned_cols=38  Identities=29%  Similarity=0.710  Sum_probs=18.0

Q ss_pred             eecccchhhcCCHHHHHHHHHhhCCCCcccccCccccCC
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRS   92 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~k~f~~   92 (101)
                      |.|..||....-+. +..|+....+.-|.|.-|++.|..
T Consensus         4 FtCnvCgEsvKKp~-vekH~srCrn~~fSCIDC~k~F~~   41 (276)
T KOG2186|consen    4 FTCNVCGESVKKPQ-VEKHMSRCRNAYFSCIDCGKTFER   41 (276)
T ss_pred             Eehhhhhhhccccc-hHHHHHhccCCeeEEeeccccccc
Confidence            44555554443332 334554444444555555555554

>KOG2893|consensus

Probab=93.03  E-value=0.039  Score=35.78  Aligned_cols=38  Identities=21%  Similarity=0.547  Sum_probs=28.3

Q ss_pred             cccchhhcCCHHHHHHHHHhhCCCCcccccCccccCChHHH
Q psy11364         56 CFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDAL   96 (101)
Q Consensus        56 C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~k~f~~~~~l   96 (101)
                      |..|++.|....-|..|++.   |.|+|-+|.|..-.-..|
T Consensus        13 cwycnrefddekiliqhqka---khfkchichkkl~sgpgl   50 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA---KHFKCHICHKKLFSGPGL   50 (341)
T ss_pred             eeecccccchhhhhhhhhhh---ccceeeeehhhhccCCCc
Confidence            67889999998888877654   778999998765444333

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=90.94  E-value=0.14  Score=22.74  Aligned_cols=8  Identities=25%  Similarity=0.966  Sum_probs=4.3

Q ss_pred             CcccccCc
Q psy11364         80 FYACSSCS   87 (101)
Q Consensus        80 p~~C~~C~   87 (101)
                      |+.|++||
T Consensus        17 ~~~CP~Cg   24 (33)
T cd00350          17 PWVCPVCG   24 (33)
T ss_pred             CCcCcCCC
Confidence            45555554

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=90.80  E-value=0.28  Score=26.66  Aligned_cols=68  Identities=18%  Similarity=0.203  Sum_probs=18.3

Q ss_pred             CCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHH---hhCCCCcccccCccccCChHHHhcccC
Q psy11364         26 SSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHME---THQNAFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        26 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~---~h~~kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|..|+..|.....+..|....+.-..+ ..    ..+.....+..+.+   ...   +.|..|++.|.....|..|++
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-~~----~~l~~~~~~~~~~~~~~~~~---~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-DQ----KYLVDPNRLLNYLRKKVKES---FRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             -----------------------------------------------------SS---EEBSSSS-EESSHHHHHHHHH
T ss_pred             Cccccccccccccccccccccccccccc-cc----cccccccccccccccccCCC---CCCCccCCCCcCHHHHHHHHc
Confidence            4888999998888887776544321111 00    00111111111111   113   479999999999999999873

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=90.52  E-value=0.071  Score=35.97  Aligned_cols=52  Identities=17%  Similarity=0.236  Sum_probs=34.0

Q ss_pred             CCCCCCC--CCCCCccCCCCCC-----CCC-------------CCCCCCcceecccchhhcCCHHHHHHHHH
Q psy11364         23 SPLSSSI--PGSSKTKASGSGT-----TGG-------------SSNHSKLFATCFVCGKQLSNQYNLRVHME   74 (101)
Q Consensus        23 ~~~~c~~--c~~~~~~~~~~~~-----~~~-------------~~~~~~~~~~C~~c~~~~~~~~~l~~h~~   74 (101)
                      .||.|++  |.+.+...-.|.-     |..             +-....+||.|++|+|.|..--.|+-|+.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            4899987  6666655544431     100             01112489999999999999888877753

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=89.78  E-value=0.27  Score=28.08  Aligned_cols=30  Identities=17%  Similarity=0.229  Sum_probs=17.1

Q ss_pred             CCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCH
Q psy11364         25 LSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQ   66 (101)
Q Consensus        25 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~   66 (101)
                      ..|+.||+.|..   |         ++.|..|+.||..|...
T Consensus        10 R~Cp~CG~kFYD---L---------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYD---L---------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhcc---C---------CCCCccCCCCCCccCcc
Confidence            456666766632   1         23555667777666554

The function of members of this family is unknown.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.58  E-value=0.22  Score=33.79  Aligned_cols=59  Identities=20%  Similarity=0.214  Sum_probs=36.9

Q ss_pred             CCCCCCCCCCCccCCCCCCCCC--CCCCCC--cceecc--cchhhcCCHHHHHHHHHhhCC-CCccc
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGG--SSNHSK--LFATCF--VCGKQLSNQYNLRVHMETHQN-AFYAC   83 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~--~~~~~~--~~~~C~--~c~~~~~~~~~l~~h~~~h~~-kp~~C   83 (101)
                      +..|..|...+.....+..+..  .+. .+  +++.|.  .|++.+.....+..|...|++ .++.+
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHS-GESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             CCCCccccCCccccccccccccccccc-cccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            4556666666666666666665  333 34  666666  577777777777777666666 54544

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=89.45  E-value=0.27  Score=29.87  Aligned_cols=43  Identities=16%  Similarity=0.334  Sum_probs=22.3

Q ss_pred             CCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHH
Q psy11364         26 SSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNL   69 (101)
Q Consensus        26 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l   69 (101)
                      .||.||.....--........... .+.+.|+.||..|.....+
T Consensus         2 ~cp~c~~~~~~~~~s~~~~~~~~~-~~~~~c~~c~~~f~~~e~~   44 (154)
T PRK00464          2 RCPFCGHPDTRVIDSRPAEDGNAI-RRRRECLACGKRFTTFERV   44 (154)
T ss_pred             cCCCCCCCCCEeEeccccCCCCce-eeeeeccccCCcceEeEec
Confidence            588888755332221111111111 2337888888887765543

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=88.69  E-value=0.28  Score=24.86  Aligned_cols=32  Identities=19%  Similarity=0.378  Sum_probs=20.0

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCCCCcccccCc
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCS   87 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~   87 (101)
                      -.|.|+.||++.-.+..-=    --.+.+|.|+.||
T Consensus        26 v~F~CPnCGe~~I~Rc~~C----Rk~g~~Y~Cp~CG   57 (61)
T COG2888          26 VKFPCPNCGEVEIYRCAKC----RKLGNPYRCPKCG   57 (61)
T ss_pred             eEeeCCCCCceeeehhhhH----HHcCCceECCCcC
Confidence            4488999996544433211    1123799999998

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=86.20  E-value=0.56  Score=23.49  Aligned_cols=26  Identities=19%  Similarity=0.427  Sum_probs=22.8

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHh
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMET   75 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~   75 (101)
                      ++..+.|+.|+..|.....+.+|...
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhH
Confidence            57778999999999999999999764

>PRK04860 hypothetical protein; Provisional

Probab=85.41  E-value=0.087  Score=32.13  Aligned_cols=38  Identities=13%  Similarity=0.150  Sum_probs=28.3

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSN   65 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~   65 (101)
                      .+|.|. |+.   ....+..|.+++. ++++|.|..|+..+..
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~-g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVR-GEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhc-CCccEECCCCCceeEE
Confidence            478997 887   4455556777766 4788999999987754

>PHA00626 hypothetical protein

Probab=85.38  E-value=0.8  Score=22.94  Aligned_cols=17  Identities=24%  Similarity=0.229  Sum_probs=11.8

Q ss_pred             CcceecccchhhcCCHH
Q psy11364         51 KLFATCFVCGKQLSNQY   67 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~   67 (101)
                      ...|.|..||..|+...
T Consensus        21 snrYkCkdCGY~ft~~~   37 (59)
T PHA00626         21 SDDYVCCDCGYNDSKDA   37 (59)
T ss_pred             CcceEcCCCCCeechhh
Confidence            35588888887776544

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=85.17  E-value=0.54  Score=21.00  Aligned_cols=8  Identities=25%  Similarity=0.630  Sum_probs=4.5

Q ss_pred             CcccccCc
Q psy11364         80 FYACSSCS   87 (101)
Q Consensus        80 p~~C~~C~   87 (101)
                      |..|++||
T Consensus        18 p~~CP~Cg   25 (34)
T cd00729          18 PEKCPICG   25 (34)
T ss_pred             CCcCcCCC
Confidence            45555555

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=83.35  E-value=0.96  Score=26.54  Aligned_cols=30  Identities=17%  Similarity=0.050  Sum_probs=17.5

Q ss_pred             CCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCH
Q psy11364         25 LSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQ   66 (101)
Q Consensus        25 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~   66 (101)
                      ..|+.||+.|..   |         ++.|..|+.||..|...
T Consensus        10 r~Cp~cg~kFYD---L---------nk~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        10 RICPNTGSKFYD---L---------NRRPAVSPYTGEQFPPE   39 (129)
T ss_pred             ccCCCcCccccc---c---------CCCCccCCCcCCccCcc
Confidence            456777766633   1         23556677777666544

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=80.95  E-value=1.1  Score=27.28  Aligned_cols=31  Identities=13%  Similarity=0.370  Sum_probs=20.6

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCCCCcccccCcccc
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVS   90 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~k~f   90 (101)
                      .-|.|+.|+..|+....+.        --|.|+.||...
T Consensus       108 ~~Y~Cp~c~~r~tf~eA~~--------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       108 MFFICPNMCVRFTFNEAME--------LNFTCPRCGAML  138 (158)
T ss_pred             CeEECCCCCcEeeHHHHHH--------cCCcCCCCCCEe
Confidence            4467777777777666654        257788887653

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=80.89  E-value=1  Score=27.99  Aligned_cols=32  Identities=16%  Similarity=0.451  Sum_probs=19.6

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCCCCcccccCccccC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSR   91 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~k~f~   91 (101)
                      .-|.|+.|+..|+....+.        --|.|+.||....
T Consensus       116 ~~Y~Cp~C~~rytf~eA~~--------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        116 MFFFCPNCHIRFTFDEAME--------YGFRCPQCGEMLE  147 (178)
T ss_pred             CEEECCCCCcEEeHHHHhh--------cCCcCCCCCCCCe
Confidence            3466777777766665542        2577777775443

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=80.15  E-value=1.2  Score=20.18  Aligned_cols=9  Identities=33%  Similarity=0.855  Sum_probs=4.0

Q ss_pred             eecccchhh
Q psy11364         54 ATCFVCGKQ   62 (101)
Q Consensus        54 ~~C~~c~~~   62 (101)
                      ..|..|+..
T Consensus        26 vrC~~C~~~   34 (37)
T PF13719_consen   26 VRCPKCGHV   34 (37)
T ss_pred             EECCCCCcE
Confidence            344444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	101
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-05

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 36.6 bits (85), Expect = 9e-05
 Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 4/49 (8%)

Query: 55 TCFVCGKQLSNQYNLRVHMETHQNAF----YACSSCSHVSRSRDALRKH 99
           C +CG     + +L  H   H        + C  C       D++  H
Sbjct: 9  QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAH 57

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	101
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.77
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.73
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.71
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.68
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.66
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.66
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.64
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.64
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.63
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.62
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.62
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.6
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.58
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.58
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.57
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.56
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.55
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.55
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.55
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.54
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.54
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.53
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.53
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.53
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.53
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.53
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.52
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.52
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.51
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.51
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.5
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.5
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.48
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.48
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.48
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.47
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.47
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.47
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.45
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.45
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.44
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.44
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.4
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.39
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.38
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.38
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.37
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.35
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.34
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.33
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.32
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.32
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.3
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.29
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.29
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.27
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.26
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.26
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.26
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.25
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.24
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.24
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.23
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.22
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.22
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.21
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.21
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.21
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.21
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.21
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.19
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.15
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.13
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.04
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.03
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.03
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.03
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.03
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.02
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.02
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.01
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.0
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.99
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.99
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.99
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.97
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.95
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.94
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.93
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.91
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.9
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.89
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.87
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.85
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.83
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.82
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.82
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.73
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.73
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.73
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.65
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.64
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.64
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.63
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.63
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.62
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.61
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.61
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.61
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.6
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.6
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.6
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.6
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.6
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.6
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.59
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.59
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.59
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.59
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.59
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.59
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.59
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.59
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.59
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.59
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.59
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.58
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.58
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.58
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.58
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.58
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.58
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.57
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.56
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.56
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.56
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.56
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.56
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.56
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.56
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.56
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.56
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.56
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.56
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.55
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.55
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.55
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.55
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.55
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.55
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.55
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.55
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.55
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.55
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.55
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.54
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.54
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.54
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.54
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.54
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.54
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.54
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.54
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.53
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.53
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.53
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.53
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.53
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.53
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.53
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.53
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.53
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.53
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.53
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.52
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.52
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.52
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.52
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.51
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.51
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.51
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.51
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.5
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.49
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.49
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.49
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.48
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.48
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.48
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.47
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.46
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.46
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.45
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.44
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.43
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.43
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.4
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.4
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.4
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.39
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.38
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.37
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.35
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.34
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.33
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.33
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.33
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.31
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.65
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.31
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.29
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.28
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.28
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.27
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.26
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.26
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.56
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.24
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.24
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.22
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.22
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.22
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.52
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.2
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.51
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.2
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.19
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.17
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.14
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.13
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.42
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.12
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.11
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.1
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.1
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.09
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.08
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.08
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.07
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.07
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.06
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.3
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.03
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.02
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.97
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.95
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	97.92
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.89
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.88
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.79
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.76
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.45
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.42
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	96.5
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.46
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.45
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.5
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.5
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	93.18
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.85
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	86.9
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	81.1
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	80.39

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.77  E-value=1.8e-19  Score=92.01  Aligned_cols=51  Identities=24%  Similarity=0.436  Sum_probs=49.5

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+||.|..|++.|.....|..|+++|++ +||.|.+||++|...++|..|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~   53 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK   53 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGG
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhC
Confidence            7899999999999999999999999999 99999999999999999999975

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.73  E-value=1.3e-20  Score=110.17  Aligned_cols=78  Identities=14%  Similarity=0.064  Sum_probs=72.6

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .+|.|++||+.|...+.|..|..++. ++++|.|..|++.|.....|..|+++|++ +||.|++||++|...+.|..|++
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   99 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHS-WEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIK   99 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHH-CCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHH
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcC-CCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhH
Confidence            48999999999999999988887765 58899999999999999999999999999 99999999999999999999963

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.1e-18  Score=95.89  Aligned_cols=79  Identities=18%  Similarity=0.311  Sum_probs=72.5

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ..++.|..|++.|.....+..|...+. .+++|.|..|++.|.....|..|+++|.+ +||.|..|++.|.....|..|+
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   84 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHT-GVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL   84 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCC-CCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcC-CCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            358999999999999988888877765 47899999999999999999999999999 9999999999999999999997


Q ss_pred             C
Q psy11364        101 K  101 (101)
Q Consensus       101 ~  101 (101)
                      +
T Consensus        85 ~   85 (96)
T 2dmd_A           85 R   85 (96)
T ss_dssp             T
T ss_pred             H
Confidence            5

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.68  E-value=2.2e-19  Score=96.01  Aligned_cols=77  Identities=19%  Similarity=0.297  Sum_probs=69.8

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+.|+.|++.|.....+..|...+. ++++|.|..|++.|.....|..|++.|.+ +||.|+.|++.|...+.|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS-DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH-TCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcC-CCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            5789999999998888877776654 47889999999999999999999999999 99999999999999999999974

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.66  E-value=2.4e-18  Score=96.21  Aligned_cols=78  Identities=21%  Similarity=0.258  Sum_probs=71.1

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .++.|..|++.|.....+..|...+. ++++|.|..|++.|.....|..|+++|.+ +||.|.+|++.|.....|..|++
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHT-DERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHC-CSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcC-CCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH
Confidence            58999999999998888877776655 47889999999999999999999999999 99999999999999999999863

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.66  E-value=1.9e-16  Score=85.90  Aligned_cols=51  Identities=22%  Similarity=0.417  Sum_probs=48.9

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ..++|.|+.|++.|.....|..|+++|++ +||.|++|+++|...+.|.+|+
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence            46789999999999999999999999999 9999999999999999999996

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.2e-17  Score=95.39  Aligned_cols=78  Identities=27%  Similarity=0.449  Sum_probs=68.4

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCC--CCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcc
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSS--NHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~--~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H   99 (101)
                      .++.|+.|++.|.....+..|...+  ...+++|.|..|++.|.....|..|+++|.+ +||.|+.|++.|.....|..|
T Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  113 (124)
T 2dlq_A           34 KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH  113 (124)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHH
T ss_pred             CCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHH
Confidence            5899999999998888877665421  2357889999999999999999999999999 999999999999999999998


Q ss_pred             c
Q psy11364        100 D  100 (101)
Q Consensus       100 ~  100 (101)
                      +
T Consensus       114 ~  114 (124)
T 2dlq_A          114 M  114 (124)
T ss_dssp             H
T ss_pred             H
Confidence            6

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=9.1e-18  Score=92.07  Aligned_cols=78  Identities=22%  Similarity=0.320  Sum_probs=70.6

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC---CCcccccCccccCChHHHhc
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN---AFYACSSCSHVSRSRDALRK   98 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~---kp~~C~~C~k~f~~~~~l~~   98 (101)
                      ..++.|..|++.|.....+..|...+. .+++|.|..|++.|.....|..|++.|.+   +||.|..|++.|.....|..
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHS-GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSC-SSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcC-CCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            358999999999999888887777655 47899999999999999999999999986   79999999999999999999


Q ss_pred             cc
Q psy11364         99 HD  100 (101)
Q Consensus        99 H~  100 (101)
                      |+
T Consensus        84 H~   85 (95)
T 2yt9_A           84 HI   85 (95)
T ss_dssp             HH
T ss_pred             HH
Confidence            96

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.63  E-value=3.2e-18  Score=93.01  Aligned_cols=78  Identities=18%  Similarity=0.316  Sum_probs=69.8

Q ss_pred             CCCCCC--CCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcc
Q psy11364         23 SPLSSS--IPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        23 ~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H   99 (101)
                      .+|.|+  .|++.|.....+..|...+. ++++|.|..|++.|.....|..|+++|.+ +||.|+.|++.|...+.|..|
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHT-GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHH-CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhC-CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            368887  69999999888877776654 47889999999999999999999999999 999999999999999999999


Q ss_pred             cC
Q psy11364        100 DK  101 (101)
Q Consensus       100 ~~  101 (101)
                      ++
T Consensus        82 ~~   83 (90)
T 1a1h_A           82 TK   83 (90)
T ss_dssp             HG
T ss_pred             HH
Confidence            74

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.62  E-value=2.3e-17  Score=89.38  Aligned_cols=78  Identities=21%  Similarity=0.288  Sum_probs=70.4

Q ss_pred             CCCCCCC--CCCCCccCCCCCCCCCCCCCCCcceecc--cchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHh
Q psy11364         23 SPLSSSI--PGSSKTKASGSGTTGGSSNHSKLFATCF--VCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALR   97 (101)
Q Consensus        23 ~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~~C~--~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~   97 (101)
                      .++.|+.  |++.|.....+..|...+. ++++|.|.  .|++.|.....|..|+++|.+ +||.|+.|++.|...+.|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHT-GEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSC-SSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcC-CCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            4678888  9999999888888877765 47899997  699999999999999999999 9999999999999999999


Q ss_pred             cccC
Q psy11364         98 KHDK  101 (101)
Q Consensus        98 ~H~~  101 (101)
                      .|++
T Consensus        83 ~H~~   86 (89)
T 2wbs_A           83 LHMK   86 (89)
T ss_dssp             HHGG
T ss_pred             HHHH
Confidence            9974

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=6.1e-18  Score=95.18  Aligned_cols=79  Identities=24%  Similarity=0.274  Sum_probs=71.1

Q ss_pred             CCCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcc
Q psy11364         21 LTSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        21 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H   99 (101)
                      ...+|.| .|++.|.....+..|...+. .+++|.|..|++.|.....|..|+++|.+ ++|.|+.|++.|.....|..|
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHL-GLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH   84 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHS-CCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcC-CCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHH
Confidence            3468999 89999999888887777655 47889999999999999999999999999 999999999999999999999


Q ss_pred             cC
Q psy11364        100 DK  101 (101)
Q Consensus       100 ~~  101 (101)
                      ++
T Consensus        85 ~~   86 (110)
T 2csh_A           85 VT   86 (110)
T ss_dssp             HH
T ss_pred             HH
Confidence            73

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.7e-17  Score=93.05  Aligned_cols=76  Identities=12%  Similarity=0.159  Sum_probs=68.3

Q ss_pred             CCCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcc
Q psy11364         21 LTSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        21 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H   99 (101)
                      ...++.|+.|++.|.....+..|...+   .++|.|..|++.|.....|..|+. |++ +||.|++|++.|.....|..|
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H---~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H   88 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLC---RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRH   88 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHH---HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHC---CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHH
Confidence            345899999999999988887776654   478999999999999999999996 999 999999999999999999999


Q ss_pred             c
Q psy11364        100 D  100 (101)
Q Consensus       100 ~  100 (101)
                      +
T Consensus        89 ~   89 (107)
T 1wjp_A           89 Q   89 (107)
T ss_dssp             H
T ss_pred             H
Confidence            7

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.58  E-value=7.7e-16  Score=77.00  Aligned_cols=51  Identities=29%  Similarity=0.602  Sum_probs=46.3

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +++|.|..|++.|.....|..|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   53 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLE   53 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHH
Confidence            5789999999999999999999999999 99999999999999999999873

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.58  E-value=3e-17  Score=100.17  Aligned_cols=78  Identities=27%  Similarity=0.438  Sum_probs=58.8

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .++.|+.|++.|.....+..|...+. ++++|.|..|++.|.....|..|+++|.+ +||.|+.|++.|.....|..|++
T Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  182 (190)
T 2i13_A          104 KPYACPECGKSFSQLAHLRAHQRTHT-GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR  182 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHH-CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHT
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhC-CCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            36777777777777666666655544 36778888888888888888888888887 88888888888888888887764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.5e-15  Score=78.08  Aligned_cols=52  Identities=25%  Similarity=0.459  Sum_probs=49.5

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++++|.|..|++.|.....|..|+++|.+ +||.|++|++.|.....|.+|++
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   63 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR   63 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            57899999999999999999999999999 99999999999999999999974

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.56  E-value=3.2e-17  Score=93.06  Aligned_cols=78  Identities=18%  Similarity=0.316  Sum_probs=62.8

Q ss_pred             CCCCCC--CCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccc--ccCccccCChHHHh
Q psy11364         23 SPLSSS--IPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYAC--SSCSHVSRSRDALR   97 (101)
Q Consensus        23 ~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C--~~C~k~f~~~~~l~   97 (101)
                      .++.|+  .|++.|.....+..|...+. ++++|.|..|++.|.....|..|+++|.+ +||.|  +.|++.|...+.|.
T Consensus        35 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~  113 (119)
T 2jp9_A           35 KPYQCDFKDCERRFSRSDQLKRHQRRHT-GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELV  113 (119)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH-CCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHH
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHcC-CCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHH
Confidence            478887  68888887777776666544 46788888888888888888888888888 88888  78888888888888


Q ss_pred             cccC
Q psy11364         98 KHDK  101 (101)
Q Consensus        98 ~H~~  101 (101)
                      .|++
T Consensus       114 ~H~~  117 (119)
T 2jp9_A          114 RHHN  117 (119)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8863

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=7.5e-15  Score=77.68  Aligned_cols=53  Identities=28%  Similarity=0.511  Sum_probs=48.8

Q ss_pred             CCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         49 HSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        49 ~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .++++|.|..|++.|.....|..|+++|++ +||.|++|++.|.....|..|++
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   67 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR   67 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH
Confidence            357889999999999999999999999999 99999999999999999999874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=1.5e-16  Score=87.85  Aligned_cols=78  Identities=18%  Similarity=0.191  Sum_probs=69.7

Q ss_pred             CCCCCCC--CCCCCccCCCCCCCCCCCCCCCcceecc--cchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHh
Q psy11364         23 SPLSSSI--PGSSKTKASGSGTTGGSSNHSKLFATCF--VCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALR   97 (101)
Q Consensus        23 ~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~~C~--~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~   97 (101)
                      .++.|..  |++.|.....+..|...+. ++++|.|.  .|++.|.....|..|+++|.+ +||.|++|++.|.....|.
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHT-GEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHS-CCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhC-CCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            4788886  9999999888887777655 47889996  699999999999999999999 9999999999999999999


Q ss_pred             cccC
Q psy11364         98 KHDK  101 (101)
Q Consensus        98 ~H~~  101 (101)
                      .|++
T Consensus        93 ~H~~   96 (100)
T 2ebt_A           93 LHMK   96 (100)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9974

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=4e-15  Score=77.39  Aligned_cols=52  Identities=29%  Similarity=0.456  Sum_probs=49.2

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++++|.|..|++.|.....|..|+++|.+ +||.|.+|++.|.....|..|++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~   58 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK   58 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHH
Confidence            57899999999999999999999999999 99999999999999999999863

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=8.4e-15  Score=76.65  Aligned_cols=62  Identities=18%  Similarity=0.265  Sum_probs=53.1

Q ss_pred             CCCCCCCCCCCCcceecc--cchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         40 SGTTGGSSNHSKLFATCF--VCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        40 ~~~~~~~~~~~~~~~~C~--~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +..+......++++|.|.  .|++.|.....|..|+++|.+ +||.|+.||+.|...+.|.+|++
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHT
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            334444445568899997  699999999999999999999 99999999999999999999975

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.54  E-value=1.6e-16  Score=90.19  Aligned_cols=79  Identities=18%  Similarity=0.305  Sum_probs=70.7

Q ss_pred             CCCCCCCC--CCCCCccCCCCCCCCCCCCCCCcceecc--cchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHH
Q psy11364         22 TSPLSSSI--PGSSKTKASGSGTTGGSSNHSKLFATCF--VCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDAL   96 (101)
Q Consensus        22 ~~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~~C~--~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l   96 (101)
                      ..++.|..  |++.|.....+..|...+. ++++|.|.  .|++.|.....|..|++.|.+ +||.|+.|++.|.....|
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHT-GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHH-TTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhC-CCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            35799987  9999999888887777654 47889999  799999999999999999999 999999999999999999


Q ss_pred             hcccC
Q psy11364         97 RKHDK  101 (101)
Q Consensus        97 ~~H~~  101 (101)
                      ..|++
T Consensus        83 ~~H~~   87 (119)
T 2jp9_A           83 KTHTR   87 (119)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99863

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.53  E-value=4.2e-18  Score=92.57  Aligned_cols=77  Identities=10%  Similarity=0.118  Sum_probs=65.0

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCCCCcccccCccccCChHHHhcccC
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ||.|+.|++.|...+.+..|..++. ++++|.|..|++.|.....|..|++.|.+.+|.|+.|++.|.....|..|++
T Consensus         3 ~~~C~~C~k~f~~~~~L~~H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHLTTHIRTHT-GEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHH-CCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHHHcC-CCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHH
Confidence            6788999999988888877776654 4778999999999999999999998887788899999999999998888863

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=6.4e-15  Score=74.35  Aligned_cols=49  Identities=31%  Similarity=0.580  Sum_probs=46.8

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ++|.|..|++.|.....|..|+++|++ +||.|+.|++.|...+.|..|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            479999999999999999999999999 9999999999999999999995

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.53  E-value=2.5e-16  Score=90.09  Aligned_cols=79  Identities=22%  Similarity=0.331  Sum_probs=69.6

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceeccc--chhhcCCHHHHHHHHHhhCC-CCcccc--cCccccCChHHH
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFV--CGKQLSNQYNLRVHMETHQN-AFYACS--SCSHVSRSRDAL   96 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~--c~~~~~~~~~l~~h~~~h~~-kp~~C~--~C~k~f~~~~~l   96 (101)
                      ..++.|+.|++.|.....+..|...+. ++++|.|..  |++.|.....|..|+++|.+ +||.|+  .|++.|...+.|
T Consensus        32 ~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L  110 (124)
T 1ubd_C           32 PRVHVCAECGKAFVESSKLKRHQLVHT-GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL  110 (124)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHGGGTS-CCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTT
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcC-CCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHH
Confidence            358999999999999888888877665 478899975  99999999999999999999 999995  599999999999


Q ss_pred             hcccC
Q psy11364         97 RKHDK  101 (101)
Q Consensus        97 ~~H~~  101 (101)
                      ..|++
T Consensus       111 ~~H~~  115 (124)
T 1ubd_C          111 KSHIL  115 (124)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98863

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=6.9e-15  Score=77.29  Aligned_cols=52  Identities=23%  Similarity=0.383  Sum_probs=49.1

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++++|.|..|++.|.....|..|+++|.+ +||.|.+|++.|.....|.+|++
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   66 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR   66 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHH
Confidence            47889999999999999999999999999 99999999999999999999863

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.53  E-value=6e-16  Score=91.58  Aligned_cols=76  Identities=20%  Similarity=0.262  Sum_probs=60.8

Q ss_pred             CCCCCCCCCCccCCCCCCCCCCCCCCCcceeccc--chhhcCCHHHHHHHHHhhCC-CCccccc--CccccCChHHHhcc
Q psy11364         25 LSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFV--CGKQLSNQYNLRVHMETHQN-AFYACSS--CSHVSRSRDALRKH   99 (101)
Q Consensus        25 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~--c~~~~~~~~~l~~h~~~h~~-kp~~C~~--C~k~f~~~~~l~~H   99 (101)
                      +.|+.|++.|.....+..|...+. ++++|.|..  |++.|.....|..|+++|++ +||.|..  |++.|.....|.+|
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHT-GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHH-CCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcC-CCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHH
Confidence            678888888877777766666554 467888877  88888888888888888888 8888886  88888888888888


Q ss_pred             cC
Q psy11364        100 DK  101 (101)
Q Consensus       100 ~~  101 (101)
                      ++
T Consensus       142 ~~  143 (155)
T 2rpc_A          142 MH  143 (155)
T ss_dssp             ST
T ss_pred             HH
Confidence            64

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=1.1e-17  Score=94.71  Aligned_cols=79  Identities=13%  Similarity=-0.000  Sum_probs=66.4

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCC--CCCCCcc-eecccchhhc--CCHHHHHHHHHhhCC-CCcccccCccccCChHH
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGS--SNHSKLF-ATCFVCGKQL--SNQYNLRVHMETHQN-AFYACSSCSHVSRSRDA   95 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~--~~~~~~~-~~C~~c~~~~--~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~   95 (101)
                      ..+|.|+.|++.|.....+..|...  +.. .++ +.|..|++.|  .....|..|+++|++ +||.|++|++.|...+.
T Consensus        17 ~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~-~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~   95 (115)
T 2dmi_A           17 ASKFRCKDCSAAYDTLVELTVHMNETGHYR-DDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQD   95 (115)
T ss_dssp             CCSEEBSSSSCEESSHHHHHHHHHHTCCCB-CSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHH
T ss_pred             CCCEECCccCchhcCHHHHHHHHHHhCccc-cCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHH
Confidence            3589999999999988888766654  332 344 4599999988  889999999999999 99999999999999999


Q ss_pred             HhcccC
Q psy11364         96 LRKHDK  101 (101)
Q Consensus        96 l~~H~~  101 (101)
                      |..|++
T Consensus        96 L~~H~~  101 (115)
T 2dmi_A           96 LSVHMI  101 (115)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999863

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.52  E-value=4.4e-16  Score=88.79  Aligned_cols=79  Identities=20%  Similarity=0.223  Sum_probs=70.0

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHh---hCC-CCcccccCccccCChHHHh
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMET---HQN-AFYACSSCSHVSRSRDALR   97 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~---h~~-kp~~C~~C~k~f~~~~~l~   97 (101)
                      ..++.|+.|++.|.....+..|...+. ++++|.|..|++.|.....|..|+..   +.+ ++|.|++|++.|.....|.
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHT-GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHS-SCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCC-CCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            358999999999999888887776655 47899999999999999999999985   466 8999999999999999999


Q ss_pred             cccC
Q psy11364         98 KHDK  101 (101)
Q Consensus        98 ~H~~  101 (101)
                      .|++
T Consensus        84 ~H~~   87 (124)
T 2dlq_A           84 LHMV   87 (124)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9863

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.51  E-value=1.2e-15  Score=93.11  Aligned_cols=77  Identities=25%  Similarity=0.432  Sum_probs=52.6

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .+|.|+.|++.|.....+..|...+. ++++|.|..|++.|.....|..|++.|.+ ++|.|+.|++.|.....|..|+
T Consensus        20 ~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   97 (190)
T 2i13_A           20 KPYACPECGKSFSRSDHLAEHQRTHT-GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQ   97 (190)
T ss_dssp             -----------CCSSHHHHHGGGCC----CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred             CCCcCCCCccccCCHHHHHHHHHHcC-CCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHH
Confidence            47889999988888877777776655 46788888888888888888888888888 8888888888888888888775

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.51  E-value=8.1e-15  Score=73.19  Aligned_cols=49  Identities=29%  Similarity=0.545  Sum_probs=46.3

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ||.|..|++.|.....|..|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   50 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK   50 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHH
Confidence            58899999999999999999999999 99999999999999999999863

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=2.3e-14  Score=75.80  Aligned_cols=61  Identities=21%  Similarity=0.553  Sum_probs=53.3

Q ss_pred             CCCCCCCCCCCCcceecccchhhcCCHHHHHHHHH-hhCC--CCcccccCccccCChHHHhcccC
Q psy11364         40 SGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHME-THQN--AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        40 ~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~-~h~~--kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +..|.+++. ++++|.|..|++.|.....|..|++ .|.+  +||.|+.|++.|.....|..|++
T Consensus         3 ~~~H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~   66 (77)
T 2ct1_A            3 SGSSGRTHS-GEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR   66 (77)
T ss_dssp             CCCCCCCCS-CCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCccccccC-CCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHH
Confidence            445666665 5889999999999999999999997 6876  79999999999999999999863

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=3.1e-16  Score=83.28  Aligned_cols=68  Identities=19%  Similarity=0.253  Sum_probs=58.5

Q ss_pred             CCCCCCC--CCCCCccCCCCCCCCC-CCCCCCcceeccc--chhhcCCHHHHHHHHHhhCC-CCcccccCccccC
Q psy11364         23 SPLSSSI--PGSSKTKASGSGTTGG-SSNHSKLFATCFV--CGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSR   91 (101)
Q Consensus        23 ~~~~c~~--c~~~~~~~~~~~~~~~-~~~~~~~~~~C~~--c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~   91 (101)
                      .++.|..  |++.|.....+..|.. .+. ++++|.|..  |++.|.....|..|+++|++ +||.|++||++|.
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHI-HQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGG-SCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhC-CCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            3566665  9999999888888876 444 578999998  99999999999999999999 9999999999984

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.50  E-value=1.9e-15  Score=92.16  Aligned_cols=78  Identities=21%  Similarity=0.290  Sum_probs=57.9

Q ss_pred             CCCCC--CCCCCCccCCCCCCCC-CCCCCCCcceec--ccchhhcCCHHHHHHHHHhhCC-CCccccc--CccccCChHH
Q psy11364         24 PLSSS--IPGSSKTKASGSGTTG-GSSNHSKLFATC--FVCGKQLSNQYNLRVHMETHQN-AFYACSS--CSHVSRSRDA   95 (101)
Q Consensus        24 ~~~c~--~c~~~~~~~~~~~~~~-~~~~~~~~~~~C--~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~--C~k~f~~~~~   95 (101)
                      ++.|+  .|++.|.....+..|. ..+..++++|.|  ..|++.|.....|..|+++|++ +||.|+.  |++.|...+.
T Consensus        72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~  151 (190)
T 1tf6_A           72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSR  151 (190)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHH
T ss_pred             ceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHH
Confidence            66676  6777776666666555 444334667888  7788888888888888888888 8888876  8888888888


Q ss_pred             HhcccC
Q psy11364         96 LRKHDK  101 (101)
Q Consensus        96 l~~H~~  101 (101)
                      |..|++
T Consensus       152 L~~H~~  157 (190)
T 1tf6_A          152 LKRHEK  157 (190)
T ss_dssp             HHHHHT
T ss_pred             HHHHHH
Confidence            888764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.50  E-value=5e-16  Score=88.81  Aligned_cols=76  Identities=17%  Similarity=0.218  Sum_probs=68.3

Q ss_pred             CCCCCC--CCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc--CccccCChHHHh
Q psy11364         23 SPLSSS--IPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS--CSHVSRSRDALR   97 (101)
Q Consensus        23 ~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~--C~k~f~~~~~l~   97 (101)
                      .++.|+  .|++.|.....+..|...+  ++++|.|..|++.|.....|..|+++|.+ +||.|..  |++.|.....|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH--GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG--SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc--CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            367888  8999999988888887765  57889999999999999999999999999 9999975  999999999999


Q ss_pred             ccc
Q psy11364         98 KHD  100 (101)
Q Consensus        98 ~H~  100 (101)
                      .|+
T Consensus        82 ~H~   84 (124)
T 1ubd_C           82 THV   84 (124)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.2e-14  Score=74.59  Aligned_cols=52  Identities=27%  Similarity=0.480  Sum_probs=48.2

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHh-h-CC-CCcccccCccccCChHHHhcccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMET-H-QN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~-h-~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++++|.|..|++.|.....|..|++. | .+ +||.|+.|++.|...+.|..|++
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHH
Confidence            47899999999999999999999998 7 57 99999999999999999999863

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.48  E-value=2.6e-15  Score=88.82  Aligned_cols=79  Identities=15%  Similarity=0.218  Sum_probs=67.9

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcc--------eecccchhhcCCHHHHHHHHHhhCC-CCccccc--CccccC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLF--------ATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS--CSHVSR   91 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~--------~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~--C~k~f~   91 (101)
                      -++.|..|++.|.....+..|.........+        |.|..|++.|.....|..|+++|.+ +||.|..  |++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            4889999999999988887766552222322        7899999999999999999999999 9999998  999999


Q ss_pred             ChHHHhcccC
Q psy11364         92 SRDALRKHDK  101 (101)
Q Consensus        92 ~~~~l~~H~~  101 (101)
                      ....|..|++
T Consensus       104 ~~~~L~~H~~  113 (155)
T 2rpc_A          104 RSENLKIHKR  113 (155)
T ss_dssp             CHHHHHHHHT
T ss_pred             CHHHHHHHHH
Confidence            9999999974

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.48  E-value=1.9e-16  Score=80.66  Aligned_cols=57  Identities=25%  Similarity=0.345  Sum_probs=52.0

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCCCC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAF   80 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~kp   80 (101)
                      .||.|..||+.|...+.|..|.+++. +++||.|..|++.|.....|..|+++|+++|
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht-~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHL-GYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHH-TCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhC-CCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            48999999999999999999988876 5899999999999999999999999999854

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=4.7e-15  Score=82.07  Aligned_cols=65  Identities=20%  Similarity=0.285  Sum_probs=53.6

Q ss_pred             ccCCCCCCCCCCCCCCCcceecccchhhcC-CHHHHHHHHHhhCC--CCcccccCccccCChHHHhccc
Q psy11364         35 TKASGSGTTGGSSNHSKLFATCFVCGKQLS-NQYNLRVHMETHQN--AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~-~~~~l~~h~~~h~~--kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ...+.+..|.+.+. ++++|.|..|++.|. ....|..|+++|.+  +||.|.+|++.|.....|.+|+
T Consensus         7 ~~~~~~~~h~~~h~-~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~   74 (98)
T 2gqj_A            7 GPGGPEEQWQRAIH-ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT   74 (98)
T ss_dssp             CCCCSCSHHHHTTT-TTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHH
T ss_pred             CCCCcHHHHHHHhc-cCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHH
Confidence            33344444555544 478899999999999 99999999999886  7999999999999999999986

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.47  E-value=1.4e-14  Score=84.47  Aligned_cols=53  Identities=25%  Similarity=0.501  Sum_probs=50.2

Q ss_pred             CCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         49 HSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        49 ~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .++++|.|..|++.|.....|..|+++|++ +||.|+.|+++|...+.|..|++
T Consensus        18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   71 (133)
T 2lt7_A           18 DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEI   71 (133)
T ss_dssp             TTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhcc
Confidence            468999999999999999999999999999 99999999999999999999863

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.2e-15  Score=90.07  Aligned_cols=78  Identities=27%  Similarity=0.349  Sum_probs=62.4

Q ss_pred             CCCCCCC--CCCCCccCCCCCCCCCCCCCCCcceeccc--chhhcCCHHHHHHHH-HhhCC-CCccccc--CccccCChH
Q psy11364         23 SPLSSSI--PGSSKTKASGSGTTGGSSNHSKLFATCFV--CGKQLSNQYNLRVHM-ETHQN-AFYACSS--CSHVSRSRD   94 (101)
Q Consensus        23 ~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~~C~~--c~~~~~~~~~l~~h~-~~h~~-kp~~C~~--C~k~f~~~~   94 (101)
                      .++.|+.  |++.|.....+..|...+. ++++|.|..  |++.|.....|..|+ ++|++ +||.|+.  |++.|...+
T Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~  144 (155)
T 2gli_A           66 KPHKCTFEGCRKSYSRLENLKTHLRSHT-GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS  144 (155)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT-TCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHH
T ss_pred             CCccCCCCCCCCcccCHHHHHHHHHHcC-CCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHH
Confidence            4788874  8888888777777766654 467888887  888888888888887 78888 8888887  888888888


Q ss_pred             HHhcccC
Q psy11364         95 ALRKHDK  101 (101)
Q Consensus        95 ~l~~H~~  101 (101)
                      .|..|++
T Consensus       145 ~L~~H~~  151 (155)
T 2gli_A          145 SLRKHVK  151 (155)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8888863

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.4e-14  Score=78.52  Aligned_cols=49  Identities=24%  Similarity=0.456  Sum_probs=46.8

Q ss_pred             CCcceecccchhhc-CCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcc
Q psy11364         50 SKLFATCFVCGKQL-SNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        50 ~~~~~~C~~c~~~~-~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H   99 (101)
                      ++++|.|..|++.| .....|..|+++| + +||.|.+||+.|...+.|..|
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H   81 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYH   81 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHH
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHH
Confidence            36789999999999 9999999999999 8 999999999999999999999

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=5.9e-14  Score=78.46  Aligned_cols=50  Identities=24%  Similarity=0.442  Sum_probs=28.4

Q ss_pred             CCcceecccchhhcCCHHHHHHHHH-hh---CC-CCcccccCccccCChHHHhcc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHME-TH---QN-AFYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~-~h---~~-kp~~C~~C~k~f~~~~~l~~H   99 (101)
                      +++||.|..|++.|.....|..|++ +|   ++ +||.|.+||++|...+.|..|
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H   69 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH   69 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTH
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHH
Confidence            3455555556555555555555554 35   34 555565566665555555555

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=4e-14  Score=74.94  Aligned_cols=51  Identities=20%  Similarity=0.386  Sum_probs=48.0

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhC---C-CCcccccCccccCChHHHhccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQ---N-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~---~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ++++|.|..|++.|.....|..|+++|.   + +||.|.+|++.|.....|.+|+
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHH
Confidence            5789999999999999999999999997   4 8999999999999999999986

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.45  E-value=6.3e-16  Score=82.82  Aligned_cols=75  Identities=24%  Similarity=0.313  Sum_probs=66.8

Q ss_pred             CCCC--CCCCCCCccCCCCCCCCCCCCCCCcceeccc--chhhcCCHHHHHHHHHhhCCCCccccc---CccccCChHHH
Q psy11364         24 PLSS--SIPGSSKTKASGSGTTGGSSNHSKLFATCFV--CGKQLSNQYNLRVHMETHQNAFYACSS---CSHVSRSRDAL   96 (101)
Q Consensus        24 ~~~c--~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~--c~~~~~~~~~l~~h~~~h~~kp~~C~~---C~k~f~~~~~l   96 (101)
                      ||.|  +.||+.|...+.+..|...+. ++++|.|..  |++.|.....|..|+++|++  |.|..   |++.|...+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT-QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH-TTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC-CCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHH
Confidence            5778  899999999888888776655 478999988  99999999999999999997  99999   99999999999


Q ss_pred             hcccC
Q psy11364         97 RKHDK  101 (101)
Q Consensus        97 ~~H~~  101 (101)
                      ..|++
T Consensus        78 ~~H~~   82 (85)
T 2j7j_A           78 LKHVA   82 (85)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99873

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.44  E-value=4.9e-14  Score=76.28  Aligned_cols=50  Identities=24%  Similarity=0.481  Sum_probs=47.9

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ++||.|..|++.|.....|..|+++|.+ +||.|+.|++.|...+.|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~   51 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR   51 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHH
Confidence            4789999999999999999999999999 9999999999999999999986

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.44  E-value=3.5e-13  Score=70.22  Aligned_cols=53  Identities=26%  Similarity=0.483  Sum_probs=48.7

Q ss_pred             CCCcceeccc--chhhcCCHHHHHHHHHhhCC-CCccccc--CccccCChHHHhcccC
Q psy11364         49 HSKLFATCFV--CGKQLSNQYNLRVHMETHQN-AFYACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        49 ~~~~~~~C~~--c~~~~~~~~~l~~h~~~h~~-kp~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      ...++|.|..  |++.|.....|..|+++|++ +||.|.+  |++.|.....|.+|++
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            3468899988  99999999999999999999 9999965  9999999999999975

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.40  E-value=5.5e-13  Score=66.05  Aligned_cols=43  Identities=23%  Similarity=0.298  Sum_probs=40.6

Q ss_pred             CCcceecccchhhcCCHHHHHHHHH-hhCC-CCcccccCccccCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHME-THQN-AFYACSSCSHVSRS   92 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~-~h~~-kp~~C~~C~k~f~~   92 (101)
                      .+++|.|..|++.|.....|..|++ +|++ +||.|++|++.|.+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            5789999999999999999999997 8999 99999999999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.39  E-value=1.1e-12  Score=72.87  Aligned_cols=53  Identities=34%  Similarity=0.685  Sum_probs=49.7

Q ss_pred             CCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         49 HSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        49 ~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ..+++|.|..|++.|.....|..|++.|.+ +||.|++|++.|.....|..|++
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   66 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY   66 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGG
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHH
Confidence            457889999999999999999999999999 99999999999999999999874

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=9e-14  Score=71.55  Aligned_cols=50  Identities=24%  Similarity=0.341  Sum_probs=46.6

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc-cCccccCChHHHhcccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS-SCSHVSRSRDALRKHDK  101 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~-~C~k~f~~~~~l~~H~~  101 (101)
                      .+++|.|..|++.|. ...|..|+++ ++ +||.|+ .||+.|...+.|..|++
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~   58 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLK   58 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHH
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHH
Confidence            478999999999999 9999999999 88 999999 99999999999999863

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=2.9e-14  Score=75.41  Aligned_cols=61  Identities=16%  Similarity=0.154  Sum_probs=55.4

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccc
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYAC   83 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C   83 (101)
                      ..++.|+.|++.|.....+..|...+. ++++|.|..|++.|.....|..|+++|++ +||.|
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHT-GEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTC-CSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcC-CCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            358999999999999988888887765 47899999999999999999999999999 99987

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=7.7e-13  Score=70.83  Aligned_cols=66  Identities=11%  Similarity=0.085  Sum_probs=29.8

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCC---CcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccc
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHS---KLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHV   89 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~---~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~   89 (101)
                      +|.|..|++.|.....+..|...+...   +++|.|..|++.|.....|..|+++|.+ +++.|..|+.+
T Consensus        15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A           15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCC
T ss_pred             CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCC
Confidence            444555555544444443333222211   1345555555555555555555555544 45555544443

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.35  E-value=1.1e-13  Score=84.33  Aligned_cols=78  Identities=17%  Similarity=0.316  Sum_probs=64.7

Q ss_pred             CCCCC--CCCCCCCccCCCCCCCCCCCCCCCcceecc--cchhhcCCHHHHHHHH-HhhC-C-CCccc--ccCccccCCh
Q psy11364         23 SPLSS--SIPGSSKTKASGSGTTGGSSNHSKLFATCF--VCGKQLSNQYNLRVHM-ETHQ-N-AFYAC--SSCSHVSRSR   93 (101)
Q Consensus        23 ~~~~c--~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~--~c~~~~~~~~~l~~h~-~~h~-~-kp~~C--~~C~k~f~~~   93 (101)
                      .++.|  +.|++.|.....+..|...+. ++++|.|.  .|++.|.....|..|+ +.|. + ++|.|  +.|++.|...
T Consensus        41 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~  119 (190)
T 1tf6_A           41 KPFPCKEEGCEKGFTSLHHLTRHSLTHT-GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKH  119 (190)
T ss_dssp             CSSCCSSTTCCCCCSSHHHHHHHHTTTT-TCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSH
T ss_pred             CCccCCCCCCChhhCCHHHHHHHHHHcc-CCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCH
Confidence            47888  889999988888877777665 47789998  8999999999999998 5673 5 78999  8899999999


Q ss_pred             HHHhcccC
Q psy11364         94 DALRKHDK  101 (101)
Q Consensus        94 ~~l~~H~~  101 (101)
                      ..|..|++
T Consensus       120 ~~L~~H~~  127 (190)
T 1tf6_A          120 NQLKVHQF  127 (190)
T ss_dssp             HHHHHHHG
T ss_pred             HHHHHHHH
Confidence            99988863

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.1e-14  Score=81.51  Aligned_cols=66  Identities=9%  Similarity=-0.009  Sum_probs=56.9

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCC-CC--CCCcceecccchhhcCCHHHHHHH-HHhhCC-CCcccccCcc
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGS-SN--HSKLFATCFVCGKQLSNQYNLRVH-METHQN-AFYACSSCSH   88 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~-~~--~~~~~~~C~~c~~~~~~~~~l~~h-~~~h~~-kp~~C~~C~k   88 (101)
                      .||.|+.||+.|...+.+..|.+. +.  .++++|.|..|++.|.....|..| +++|++ +||.|.++.+
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            489999999999999888877653 42  347899999999999999999999 899999 9999987543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=5.2e-14  Score=75.52  Aligned_cols=61  Identities=23%  Similarity=0.526  Sum_probs=52.4

Q ss_pred             CCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-----CCcccccCccccCChHHHhcccC
Q psy11364         40 SGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-----AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        40 ~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-----kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +..|.+++. ++++|.|..|++.|.....|..|++.|..     ++|.|..|++.|.....|..|++
T Consensus         3 ~~~H~~~H~-~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~   68 (86)
T 1x6h_A            3 SGSSGRTHT-GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD   68 (86)
T ss_dssp             TTCCSTTCC-CCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             cccccceec-CCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHH
Confidence            445666665 48899999999999999999999987654     58999999999999999999863

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.32  E-value=5.7e-14  Score=82.88  Aligned_cols=77  Identities=18%  Similarity=0.226  Sum_probs=64.5

Q ss_pred             CCCCCC-----CCCCCCccCCCCCCCCCCCCCCCcceeccc--chhhcCCHHHHHHHHHhhCC-CCccccc--CccccCC
Q psy11364         23 SPLSSS-----IPGSSKTKASGSGTTGGSSNHSKLFATCFV--CGKQLSNQYNLRVHMETHQN-AFYACSS--CSHVSRS   92 (101)
Q Consensus        23 ~~~~c~-----~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~--c~~~~~~~~~l~~h~~~h~~-kp~~C~~--C~k~f~~   92 (101)
                      .++.|+     .|++.|.....+..|...+. ++++|.|..  |++.|.....|..|+++|.+ +||.|+.  |++.|..
T Consensus        33 ~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~-~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  111 (155)
T 2gli_A           33 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHT-GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSN  111 (155)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH-CCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESS
T ss_pred             cceeCCCCCccchhhhhhhHHHHHHHHHhcC-CCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCC
Confidence            466665     44588888877777776655 478899974  99999999999999999999 9999998  9999999


Q ss_pred             hHHHhccc
Q psy11364         93 RDALRKHD  100 (101)
Q Consensus        93 ~~~l~~H~  100 (101)
                      .+.|..|+
T Consensus       112 ~~~L~~H~  119 (155)
T 2gli_A          112 ASDRAKHQ  119 (155)
T ss_dssp             SSTTHHHH
T ss_pred             HHHHHHHH
Confidence            99998886

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.32  E-value=9.7e-13  Score=71.73  Aligned_cols=51  Identities=25%  Similarity=0.533  Sum_probs=48.7

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ++++|.|..|++.|.....|..|+++|.+ +||.|..|++.|.....|..|+
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   55 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV   55 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH
Confidence            47889999999999999999999999999 9999999999999999999986

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.30  E-value=1.1e-12  Score=75.38  Aligned_cols=51  Identities=20%  Similarity=0.285  Sum_probs=48.0

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCCCCcccccCccccCChHHHhcccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++++|.|..|++.|.....|..|+++| .+||.|+.||+.|...+.|..|++
T Consensus        71 ~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~  121 (129)
T 2wbt_A           71 AISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVC  121 (129)
T ss_dssp             HHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHH
Confidence            478999999999999999999999999 789999999999999999999863

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.5e-12  Score=71.10  Aligned_cols=51  Identities=33%  Similarity=0.580  Sum_probs=48.6

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ++++|.|..|++.|.....|..|++.|.+ ++|.|..|++.|.....|..|+
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   56 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL   56 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHH
Confidence            47889999999999999999999999999 9999999999999999999986

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=4.1e-12  Score=71.05  Aligned_cols=51  Identities=25%  Similarity=0.516  Sum_probs=48.4

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++++|.| .|++.|.....|..|++.|.+ +||.|..|++.|.....|..|++
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   58 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   58 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHH
Confidence            5789999 999999999999999999999 99999999999999999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=3.1e-12  Score=61.69  Aligned_cols=39  Identities=26%  Similarity=0.518  Sum_probs=37.1

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCcc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSH   88 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k   88 (101)
                      .+++|.|..|++.|.....|..|+++|++ +||.|++|+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            57899999999999999999999999999 9999999986

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.27  E-value=1.8e-13  Score=71.77  Aligned_cols=59  Identities=19%  Similarity=0.276  Sum_probs=53.1

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCc
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFY   81 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~   81 (101)
                      ..+|.|..|++.|...+.+..|...+. ++++|.|..|++.|.....|..|+++|++ +||
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHT-GEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHC-CCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcC-CCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            458999999999999988888877665 47899999999999999999999999999 886

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=3.7e-12  Score=67.22  Aligned_cols=52  Identities=25%  Similarity=0.489  Sum_probs=47.7

Q ss_pred             CCcceeccc--chhhcCCHHHHHHHHH-hhCC-CCccccc--CccccCChHHHhcccC
Q psy11364         50 SKLFATCFV--CGKQLSNQYNLRVHME-THQN-AFYACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        50 ~~~~~~C~~--c~~~~~~~~~l~~h~~-~h~~-kp~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      ++++|.|..  |++.|.....|..|++ .|++ +||.|+.  |++.|.....|..|++
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~   61 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK   61 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHH
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHH
Confidence            467899986  9999999999999999 7999 9999999  9999999999999963

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-11  Score=59.06  Aligned_cols=43  Identities=28%  Similarity=0.328  Sum_probs=38.1

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGT-GEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSS-CCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCC-CCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            445554 58899999999999999999999999999 99999987

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.26  E-value=2.5e-12  Score=68.15  Aligned_cols=48  Identities=25%  Similarity=0.598  Sum_probs=46.0

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ||.|..|++.|.....|..|+++|.+ +||.|+.|++.|.....|..|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   49 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT   49 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHH
Confidence            58999999999999999999999999 9999999999999999999886

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.1e-11  Score=59.01  Aligned_cols=43  Identities=26%  Similarity=0.308  Sum_probs=38.1

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGT-GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSS-CCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcC-CCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444544 58899999999999999999999999999 99999987

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.25  E-value=2.7e-12  Score=69.19  Aligned_cols=50  Identities=22%  Similarity=0.400  Sum_probs=46.8

Q ss_pred             Ccceecc--cchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         51 KLFATCF--VCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        51 ~~~~~C~--~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +++|.|.  .|++.|.....|..|+++|.+ +||.|..|++.|.....|..|+
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   54 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI   54 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHH
Confidence            5789998  699999999999999999999 9999999999999999999986

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.25  E-value=1.2e-11  Score=58.96  Aligned_cols=43  Identities=28%  Similarity=0.329  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGT-GEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCS-SSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccC-CCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.3e-11  Score=58.84  Aligned_cols=43  Identities=26%  Similarity=0.332  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGS-GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSS-SSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCC-CCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=7.6e-12  Score=59.70  Aligned_cols=43  Identities=26%  Similarity=0.387  Sum_probs=38.2

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGT-GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSS-SSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccC-CCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445554 58899999999999999999999999999 99999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.25  E-value=9.4e-12  Score=59.36  Aligned_cols=43  Identities=30%  Similarity=0.399  Sum_probs=38.1

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGT-GEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCC-CCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCC-CCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444544 58899999999999999999999999999 99999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.3e-11  Score=58.78  Aligned_cols=43  Identities=33%  Similarity=0.447  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGT-GENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCC-SSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCC-CCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.3e-11  Score=58.80  Aligned_cols=43  Identities=26%  Similarity=0.331  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGS-GEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSC-CCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccC-CCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            444444 57899999999999999999999999999 99999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=9.3e-12  Score=59.34  Aligned_cols=43  Identities=26%  Similarity=0.301  Sum_probs=38.2

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGT-GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCC-CSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCC-CCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            445544 58899999999999999999999999999 99999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=9.9e-12  Score=59.28  Aligned_cols=43  Identities=33%  Similarity=0.409  Sum_probs=38.1

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGA-GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSS-CCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcC-CCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1e-11  Score=59.17  Aligned_cols=43  Identities=30%  Similarity=0.411  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGT-GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCS-CCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCC-CCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.2e-11  Score=58.94  Aligned_cols=43  Identities=28%  Similarity=0.272  Sum_probs=38.1

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGT-GVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSS-CCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccC-CCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=9.9e-12  Score=59.24  Aligned_cols=43  Identities=28%  Similarity=0.389  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGT-GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCC-CCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcC-CCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444444 57899999999999999999999999999 99999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.24  E-value=1.1e-11  Score=58.83  Aligned_cols=38  Identities=18%  Similarity=0.337  Sum_probs=36.3

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCS   87 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~   87 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|+.||
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            57899999999999999999999999999 999999996

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.3e-11  Score=58.28  Aligned_cols=37  Identities=30%  Similarity=0.297  Sum_probs=35.2

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            7 GEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999999999999 99999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1e-11  Score=59.27  Aligned_cols=43  Identities=23%  Similarity=0.332  Sum_probs=37.8

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 h~~~h~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGT-GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCS-SCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCC-CCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344444 57899999999999999999999999999 99999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.6e-11  Score=58.54  Aligned_cols=43  Identities=28%  Similarity=0.335  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGT-GEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTS-SCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCC-CCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.8e-11  Score=58.25  Aligned_cols=43  Identities=28%  Similarity=0.415  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGT-GEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCS-SCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCC-CCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444444 57899999999999999999999999999 99999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=9.2e-12  Score=59.40  Aligned_cols=43  Identities=28%  Similarity=0.366  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 h~~~h~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGS-VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCC-CCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCC-CCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.4e-11  Score=58.75  Aligned_cols=43  Identities=33%  Similarity=0.440  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGT-GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCS-SCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcC-CCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-11  Score=59.11  Aligned_cols=43  Identities=28%  Similarity=0.328  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGT-GKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCS-CCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCC-CCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1e-11  Score=59.21  Aligned_cols=43  Identities=26%  Similarity=0.284  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGT-GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSS-CCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCC-CCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444444 47899999999999999999999999999 99999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.2e-11  Score=58.93  Aligned_cols=43  Identities=26%  Similarity=0.342  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGS-GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCS-CCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCC-CCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.5e-11  Score=58.62  Aligned_cols=43  Identities=30%  Similarity=0.356  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 h~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGS-GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCC-SSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccC-CCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            344444 58899999999999999999999999999 99999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.23  E-value=1.2e-11  Score=58.95  Aligned_cols=43  Identities=26%  Similarity=0.278  Sum_probs=38.1

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGM-GEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSC-CCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccC-CCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            445544 58899999999999999999999999999 99999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.23  E-value=1.1e-11  Score=59.04  Aligned_cols=43  Identities=28%  Similarity=0.288  Sum_probs=38.1

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGT-GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSC-CCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCC-CCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444544 58899999999999999999999999999 99999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.6e-11  Score=58.46  Aligned_cols=43  Identities=23%  Similarity=0.269  Sum_probs=37.8

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      +.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 h~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGS-GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCC-CCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCC-CCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            334444 58899999999999999999999999999 99999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.5e-11  Score=58.62  Aligned_cols=43  Identities=28%  Similarity=0.444  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGT-GEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSS-CCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCC-CCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344444 58899999999999999999999999999 99999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.9e-11  Score=58.19  Aligned_cols=43  Identities=26%  Similarity=0.338  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGT-GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSS-SSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCC-CCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.4e-11  Score=58.69  Aligned_cols=43  Identities=26%  Similarity=0.325  Sum_probs=37.8

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGT-GEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCC-CCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCC-CCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344444 48899999999999999999999999999 99999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.8e-11  Score=58.35  Aligned_cols=43  Identities=23%  Similarity=0.237  Sum_probs=37.8

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|..|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGS-REKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSS-CCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccC-CCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344444 47899999999999999999999999999 99999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.22  E-value=4.6e-12  Score=67.49  Aligned_cols=49  Identities=29%  Similarity=0.606  Sum_probs=46.1

Q ss_pred             ceec--ccchhhcCCHHHHHHHHHhhCC-CCccccc--CccccCChHHHhcccC
Q psy11364         53 FATC--FVCGKQLSNQYNLRVHMETHQN-AFYACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        53 ~~~C--~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      ||.|  ..|++.|.....|..|+++|.+ +||.|+.  |++.|.....|..|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   54 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK   54 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHH
Confidence            5889  8999999999999999999999 9999988  9999999999999863

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.22  E-value=1.4e-11  Score=58.75  Aligned_cols=43  Identities=28%  Similarity=0.343  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGT-GEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCT-TSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCC-CCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.5e-11  Score=58.66  Aligned_cols=43  Identities=26%  Similarity=0.365  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGS-STKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCC-CSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCC-CCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444444 48899999999999999999999999999 99999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.4e-11  Score=58.66  Aligned_cols=43  Identities=30%  Similarity=0.349  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGT-GEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCC-CCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccC-CCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.5e-11  Score=58.64  Aligned_cols=42  Identities=26%  Similarity=0.424  Sum_probs=37.3

Q ss_pred             CCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         44 GGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        44 ~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      .+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         4 ~~~h~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGS-GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCC-SCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCC-CCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34444 58899999999999999999999999999 99999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.7e-11  Score=58.39  Aligned_cols=43  Identities=28%  Similarity=0.392  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGT-GEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCC-CCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCC-CCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444444 57899999999999999999999999999 99999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.1e-11  Score=59.05  Aligned_cols=43  Identities=28%  Similarity=0.427  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~h~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGT-GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCS-SCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCC-CCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.22  E-value=1.9e-11  Score=58.28  Aligned_cols=42  Identities=29%  Similarity=0.294  Sum_probs=37.3

Q ss_pred             CCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         44 GGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        44 ~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      .+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         4 ~~~h~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGA-GVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSC-CCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCC-CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444 58899999999999999999999999999 99999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.5e-11  Score=58.55  Aligned_cols=43  Identities=26%  Similarity=0.309  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGT-GEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTT-CCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCC-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344444 58899999999999999999999999999 99999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.1e-11  Score=58.05  Aligned_cols=43  Identities=26%  Similarity=0.278  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGS-GEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTC-CCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCC-CCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444444 47899999999999999999999999999 99999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.21  E-value=1.4e-11  Score=58.62  Aligned_cols=43  Identities=26%  Similarity=0.261  Sum_probs=38.0

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGT-GEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCC-CCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCC-CCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.21  E-value=3e-12  Score=65.13  Aligned_cols=55  Identities=13%  Similarity=0.235  Sum_probs=45.6

Q ss_pred             CCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcc
Q psy11364         41 GTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        41 ~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H   99 (101)
                      ..|..++. ++++|.|..|++.|.....|.   ++|++ +||.|+.||+.|....++..+
T Consensus         3 ~~h~~~H~-~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            3 ETDERDST-NRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCSSSCC-SSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhHHHHcC-CCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            34555554 589999999999999988876   78999 999999999999988776544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.21  E-value=2e-11  Score=68.00  Aligned_cols=50  Identities=22%  Similarity=0.332  Sum_probs=47.1

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCCCCcccccCccccCChHHHhccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ++++|.|..|++.|.....|..|+++|. +||.|.+|++.|.....|..|+
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~~C~~~f~~~~~l~~H~   62 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHE   62 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHH-HSBCCTTTCCCBSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCC-CCccCCCCCCccCCHHHHHHHH
Confidence            5789999999999999999999999986 7999999999999999999886

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=8.4e-13  Score=72.04  Aligned_cols=47  Identities=17%  Similarity=0.220  Sum_probs=29.4

Q ss_pred             eecccchhhcCCHHHHHHHHHh-hCC-CC--------cccccCccccCChHHHhccc
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMET-HQN-AF--------YACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~-h~~-kp--------~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +.|..|++.|.....|..|++. |.+ ++        |.|..|++.|.....|..|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~   82 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI   82 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHH
Confidence            4566666666666666666665 655 55        66666666666666666654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.1e-13  Score=70.94  Aligned_cols=57  Identities=16%  Similarity=0.059  Sum_probs=50.7

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      ..++.|+.||+.|...+.+..        +++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus        16 ~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           16 DRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            358999999999988877755        6789999999999999999999999999 99999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.4e-11  Score=58.62  Aligned_cols=43  Identities=28%  Similarity=0.334  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGT-GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCS-SCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCC-CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            344444 58899999999999999999999999999 99999987

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2e-11  Score=68.72  Aligned_cols=63  Identities=16%  Similarity=0.137  Sum_probs=53.3

Q ss_pred             CCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHh--hCC-CCc-ccccCcccc--CChHHHhcccC
Q psy11364         38 SGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMET--HQN-AFY-ACSSCSHVS--RSRDALRKHDK  101 (101)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~--h~~-kp~-~C~~C~k~f--~~~~~l~~H~~  101 (101)
                      +.+..|.+++. ++++|.|..|++.|.....|..|+++  |.+ +++ .|+.|++.|  .....|..|++
T Consensus         5 ~~l~~H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~   73 (115)
T 2dmi_A            5 SSGKLYGSIFT-GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG   73 (115)
T ss_dssp             CCCCCCCCCCC-CCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCC
T ss_pred             hhhhhheeeeC-CCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhh
Confidence            45667777665 58899999999999999999999998  777 655 599999999  88889988864

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.8e-11  Score=58.28  Aligned_cols=43  Identities=30%  Similarity=0.415  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGS-GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCC-CCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCC-CCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.4e-11  Score=58.72  Aligned_cols=43  Identities=26%  Similarity=0.326  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGT-GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCC-CCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCC-CCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.9e-11  Score=57.13  Aligned_cols=43  Identities=26%  Similarity=0.371  Sum_probs=37.5

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGS-GEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCC-CCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCC-CCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999865

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.7e-11  Score=57.84  Aligned_cols=43  Identities=28%  Similarity=0.331  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHH-hhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHME-THQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~-~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|++ +|++ +||.|+.|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGT-GKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCC-CCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccC-CCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            444444 5889999999999999999999999 9999 99999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.3e-11  Score=57.94  Aligned_cols=43  Identities=26%  Similarity=0.364  Sum_probs=37.8

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGS-GEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCC-CCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCC-CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344444 58899999999999999999999999999 99999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.5e-11  Score=57.77  Aligned_cols=43  Identities=28%  Similarity=0.380  Sum_probs=37.5

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGT-GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSS-CCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCC-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999875

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.3e-11  Score=58.85  Aligned_cols=43  Identities=26%  Similarity=0.327  Sum_probs=37.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGT-GEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCS-SCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCC-CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 99999987

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.1e-11  Score=57.44  Aligned_cols=37  Identities=27%  Similarity=0.254  Sum_probs=35.2

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            57899999999999999999999999999 99999987

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=9.5e-13  Score=72.66  Aligned_cols=57  Identities=21%  Similarity=0.296  Sum_probs=51.5

Q ss_pred             CCCCCCCCCCCC-ccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHH-HHhhCCCCc
Q psy11364         23 SPLSSSIPGSSK-TKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVH-METHQNAFY   81 (101)
Q Consensus        23 ~~~~c~~c~~~~-~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h-~~~h~~kp~   81 (101)
                      .++.|+.||+.| ...+.+..|..++  ++++|.|..|++.|.....|..| +++|+++||
T Consensus        33 ~~~~C~~C~k~F~~~~~~L~~H~~~h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           33 GSVSCPTCQAVGRKTIEGLKKHMENC--KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             SCEECTTTCSCEESSHHHHHHHHHHH--CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCcCCCCCCCCcccCHHHHHHHHHHH--CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            489999999999 8999988888776  58999999999999999999999 999988655

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.14  E-value=8.4e-11  Score=55.94  Aligned_cols=42  Identities=29%  Similarity=0.354  Sum_probs=36.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGT-GEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCC-CCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCC-CCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            445554 48899999999999999999999999999 9999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=8.4e-11  Score=55.95  Aligned_cols=42  Identities=26%  Similarity=0.397  Sum_probs=36.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGT-GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCC-CSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccC-CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            445554 58899999999999999999999999999 9999974

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.13  E-value=1.9e-12  Score=64.40  Aligned_cols=54  Identities=17%  Similarity=0.120  Sum_probs=48.7

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ||.|+.||+.|...+.+..|..++. ++++|.|..|++.|.....|..|+++|.+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT-DVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS-SCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC-CCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            6899999999999988888877665 47899999999999999999999999886

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.12  E-value=3.8e-11  Score=65.36  Aligned_cols=61  Identities=15%  Similarity=0.059  Sum_probs=52.0

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcc--------eecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLF--------ATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~--------~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      .+.|..|++.|.....+..|..+.+.++++        |.|..|++.|.....|..|+++|++ +||.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            467999999999988888776652223555        8999999999999999999999999 999996

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-10  Score=55.38  Aligned_cols=42  Identities=29%  Similarity=0.389  Sum_probs=36.7

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+.+. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGT-GEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCS-SCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCC-CCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999975

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.4e-11  Score=56.95  Aligned_cols=37  Identities=32%  Similarity=0.378  Sum_probs=35.1

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57899999999999999999999999999 99999987

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.5e-10  Score=54.95  Aligned_cols=42  Identities=29%  Similarity=0.407  Sum_probs=36.7

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGT-GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSC-CCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCC-CCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1e-10  Score=55.57  Aligned_cols=42  Identities=29%  Similarity=0.401  Sum_probs=36.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGT-GENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCC-SCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCC-CCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444444 57899999999999999999999999999 9999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.4e-10  Score=55.10  Aligned_cols=42  Identities=31%  Similarity=0.374  Sum_probs=36.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGT-GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSC-CCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCC-CCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.6e-10  Score=54.90  Aligned_cols=42  Identities=29%  Similarity=0.396  Sum_probs=36.4

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      +.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 h~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGA-GKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCC-SSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCC-CCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            334444 58899999999999999999999999999 9999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.3e-10  Score=55.27  Aligned_cols=42  Identities=26%  Similarity=0.324  Sum_probs=36.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGT-GEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCC-CCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCC-CCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.3e-10  Score=55.17  Aligned_cols=42  Identities=26%  Similarity=0.408  Sum_probs=36.7

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.
T Consensus         3 H~~~H~-~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGT-GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCS-SCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccC-CCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            445544 58899999999999999999999999999 9999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.2e-10  Score=55.40  Aligned_cols=42  Identities=26%  Similarity=0.399  Sum_probs=36.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGT-GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSC-CCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcC-CCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.1e-10  Score=55.44  Aligned_cols=42  Identities=26%  Similarity=0.351  Sum_probs=36.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGT-GEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSS-CCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcC-CCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            444444 48899999999999999999999999999 9999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-10  Score=54.81  Aligned_cols=42  Identities=26%  Similarity=0.274  Sum_probs=36.4

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGS-GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCC-CSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcC-CCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999964

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.5e-10  Score=54.93  Aligned_cols=42  Identities=29%  Similarity=0.387  Sum_probs=36.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGT-GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCS-SCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCC-CCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.5e-10  Score=55.07  Aligned_cols=42  Identities=31%  Similarity=0.448  Sum_probs=36.5

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGM-GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCC-CCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccC-CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.9e-10  Score=54.66  Aligned_cols=42  Identities=29%  Similarity=0.460  Sum_probs=36.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+.
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGT-GEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCCCS-SCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             ccccCC-CCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.1e-10  Score=54.54  Aligned_cols=42  Identities=26%  Similarity=0.456  Sum_probs=36.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            3 SGSSGT-GEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCC-SCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             cccccC-CCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2e-10  Score=53.43  Aligned_cols=35  Identities=17%  Similarity=0.232  Sum_probs=32.9

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            7 GEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            57899999999999999999999999999 999984

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.6e-10  Score=54.85  Aligned_cols=42  Identities=29%  Similarity=0.365  Sum_probs=36.7

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGT-GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCC-CSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccC-CCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444544 58899999999999999999999999999 9999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.4e-10  Score=55.08  Aligned_cols=42  Identities=26%  Similarity=0.336  Sum_probs=36.5

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGT-GEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCS-CCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCC-CCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            344444 48899999999999999999999999999 9999974

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=4.9e-12  Score=65.50  Aligned_cols=59  Identities=15%  Similarity=0.063  Sum_probs=52.4

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCc
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFY   81 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~   81 (101)
                      ..+|.|+.|++.|.....+..|..++. ++++|.|..|++.|.....|..|++.|.+ +|.
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHC-TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGC-CSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcC-CCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            458999999999999998888887765 58899999999999999999999999988 764

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-10  Score=54.99  Aligned_cols=42  Identities=26%  Similarity=0.340  Sum_probs=36.5

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGT-GEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCC-SCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCC-CCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            344444 48899999999999999999999999999 9999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.8e-10  Score=54.70  Aligned_cols=42  Identities=29%  Similarity=0.370  Sum_probs=36.5

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGT-GEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCC-CCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCC-CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            444444 48899999999999999999999999999 9999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-10  Score=55.00  Aligned_cols=42  Identities=29%  Similarity=0.343  Sum_probs=36.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGT-GGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSS-SSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccC-CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.06  E-value=1.9e-10  Score=53.59  Aligned_cols=35  Identities=23%  Similarity=0.307  Sum_probs=32.9

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            7 GENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            57899999999999999999999999999 999984

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2e-10  Score=54.63  Aligned_cols=42  Identities=26%  Similarity=0.392  Sum_probs=36.5

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGS-GEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCC-CSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cccCCC-CCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            444444 58899999999999999999999999999 9999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.1e-10  Score=54.88  Aligned_cols=41  Identities=24%  Similarity=0.251  Sum_probs=36.5

Q ss_pred             CCCCCCCcceecc--cchhhcCCHHHHHHHHHhhCC-CCcccccC
Q psy11364         45 GSSNHSKLFATCF--VCGKQLSNQYNLRVHMETHQN-AFYACSSC   86 (101)
Q Consensus        45 ~~~~~~~~~~~C~--~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C   86 (101)
                      +++. ++++|.|.  .|++.|.....|..|+++|++ +||.|..|
T Consensus         5 ~~H~-~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGT-GEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSC-CCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcC-CCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3443 57899998  899999999999999999999 99999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.05  E-value=3.1e-10  Score=62.10  Aligned_cols=51  Identities=25%  Similarity=0.524  Sum_probs=47.1

Q ss_pred             CCcceeccc--chhhcCCHHHHHHHHHhhCC-CCcccc--cCccccCChHHHhccc
Q psy11364         50 SKLFATCFV--CGKQLSNQYNLRVHMETHQN-AFYACS--SCSHVSRSRDALRKHD  100 (101)
Q Consensus        50 ~~~~~~C~~--c~~~~~~~~~l~~h~~~h~~-kp~~C~--~C~k~f~~~~~l~~H~  100 (101)
                      ..++|.|..  |++.|.....|..|++.|.+ ++|.|.  .|++.|.....|..|+
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   67 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY   67 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHH
Confidence            467899986  99999999999999999999 999996  6999999999999886

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.2e-10  Score=55.40  Aligned_cols=41  Identities=29%  Similarity=0.357  Sum_probs=35.9

Q ss_pred             CCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         44 GGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        44 ~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      .+++. ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         4 ~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            4 GSSGT-GEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSSCS-SCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCC-CCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            34444 57899999999999999999999999999 9999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.1e-10  Score=53.29  Aligned_cols=41  Identities=27%  Similarity=0.377  Sum_probs=35.5

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGT-GEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCS-CCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCC-CCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            344444 58899999999999999999999999999 999984

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=2.9e-10  Score=53.52  Aligned_cols=40  Identities=25%  Similarity=0.333  Sum_probs=35.0

Q ss_pred             CCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         44 GGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        44 ~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      ..++. ++++|.|..|++.|.....|..|+++|++ +||.|+
T Consensus         4 ~~~h~-~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            4 GSSGA-AKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SCSCS-SSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCC-CCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            34443 47899999999999999999999999999 999984

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=2.3e-10  Score=53.75  Aligned_cols=41  Identities=24%  Similarity=0.365  Sum_probs=35.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGT-GMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSS-SSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCC-CCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            444444 57899999999999999999999999999 999984

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=2.3e-12  Score=71.08  Aligned_cols=62  Identities=11%  Similarity=0.067  Sum_probs=53.4

Q ss_pred             CCCCCCCCCCCCc-cCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         23 SPLSSSIPGSSKT-KASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        23 ~~~~c~~c~~~~~-~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      .+|.|..|++.|. ....|..|..++...+++|.|..|++.|.....|..|+++|.+ +|....
T Consensus        23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             SCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             CCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            5899999999999 8888888876654227899999999999999999999999998 886543

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=3.1e-10  Score=53.23  Aligned_cols=36  Identities=17%  Similarity=0.161  Sum_probs=33.7

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            57899999999999999999999999999 9999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.7e-10  Score=54.82  Aligned_cols=41  Identities=29%  Similarity=0.348  Sum_probs=35.8

Q ss_pred             CCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         44 GGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        44 ~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      .+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.
T Consensus         4 ~~~h~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            4 GSSGT-GEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCC-CSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCcC-CCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34444 57899999999999999999999999999 9999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=4e-10  Score=53.57  Aligned_cols=36  Identities=25%  Similarity=0.227  Sum_probs=33.8

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            9 GERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999999999999 9999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.03  E-value=3.6e-10  Score=52.51  Aligned_cols=34  Identities=21%  Similarity=0.287  Sum_probs=32.3

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYAC   83 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C   83 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|
T Consensus         8 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            57899999999999999999999999999 99987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.5e-10  Score=53.99  Aligned_cols=36  Identities=25%  Similarity=0.318  Sum_probs=33.7

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|++
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999999999999 9999963

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=2.9e-10  Score=53.49  Aligned_cols=41  Identities=20%  Similarity=0.288  Sum_probs=35.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGH-TRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCC-CCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccC-CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            344444 47899999999999999999999999999 999984

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.2e-10  Score=54.44  Aligned_cols=42  Identities=26%  Similarity=0.373  Sum_probs=36.4

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      +.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+.
T Consensus         3 h~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGS-GERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCSS-CCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCcCCC-CCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344444 58899999999999999999999999999 9999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=3.3e-10  Score=53.29  Aligned_cols=41  Identities=20%  Similarity=0.278  Sum_probs=35.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|.
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGA-GENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCS-CCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccC-CCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            444444 58899999999999999999999999999 999984

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.03  E-value=1.1e-10  Score=62.60  Aligned_cols=50  Identities=30%  Similarity=0.584  Sum_probs=46.5

Q ss_pred             Ccceeccc--chhhcCCHHHHHHHHHhhCC-CCcccc--cCccccCChHHHhccc
Q psy11364         51 KLFATCFV--CGKQLSNQYNLRVHMETHQN-AFYACS--SCSHVSRSRDALRKHD  100 (101)
Q Consensus        51 ~~~~~C~~--c~~~~~~~~~l~~h~~~h~~-kp~~C~--~C~k~f~~~~~l~~H~  100 (101)
                      ..+|.|..  |++.|.....|..|++.|.+ +||.|+  .|++.|.....|..|+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   57 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY   57 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHH
Confidence            46799998  99999999999999999999 999997  6999999999999886

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.4e-10  Score=53.75  Aligned_cols=41  Identities=27%  Similarity=0.386  Sum_probs=35.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++ +||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGT-GENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSS-SCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccC-CCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344444 57899999999999999999999999999 999984

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.02  E-value=1.8e-10  Score=56.75  Aligned_cols=51  Identities=24%  Similarity=0.290  Sum_probs=43.3

Q ss_pred             CCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcc
Q psy11364         31 GSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYA   82 (101)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~   82 (101)
                      ++.|.+.+.+..+..++. ++++|.|..|++.|.....|..|+++|++ +||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQ-SEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHT-SSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcC-CCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            456777788877777765 48899999999999999999999999999 8874

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.6e-10  Score=53.10  Aligned_cols=39  Identities=26%  Similarity=0.383  Sum_probs=34.3

Q ss_pred             CCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccc
Q psy11364         44 GGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYAC   83 (101)
Q Consensus        44 ~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C   83 (101)
                      ..++. ++++|.|..|++.|.....|..|+++|++ +||.|
T Consensus         3 ~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 SGSSG-GEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCC-SSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CcccC-CCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            34444 58899999999999999999999999999 99987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.3e-10  Score=53.74  Aligned_cols=42  Identities=29%  Similarity=0.365  Sum_probs=36.5

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~   85 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+.
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGT-GEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSC-CCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             cccCCC-CCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444444 48899999999999999999999999999 9999964

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.01  E-value=7.3e-12  Score=67.74  Aligned_cols=55  Identities=13%  Similarity=0.126  Sum_probs=49.4

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHH-hhCC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHME-THQN   78 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~-~h~~   78 (101)
                      .++.|++||+.|...+.|..|.+++. +++||.|..|++.|.....|..|++ +|++
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLH-AAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTS-CSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhcc-CCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            47899999999999999999988876 5899999999999999999999974 6765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=6.8e-12  Score=65.33  Aligned_cols=57  Identities=19%  Similarity=0.250  Sum_probs=50.8

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCCC
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNA   79 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~k   79 (101)
                      ..+|.|+.|++.|.....+..|...+. ++++|.|..|++.|.....|..|+++|++.
T Consensus        12 ~k~~~C~~C~k~f~~~~~L~~H~~~h~-~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A           12 EKPYGCVECGKAFSRSSILVQHQRVHT-GEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHGGG-CSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CCCccCCCCCCccCCHHHHHHHHHhcC-CCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            458999999999999988888877665 488999999999999999999999999873

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.99  E-value=7.9e-12  Score=62.07  Aligned_cols=54  Identities=19%  Similarity=0.156  Sum_probs=46.8

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      .+|.|+.|++.|...+.+..|..++. ++++|.|..|++.|.....|..|++.|.
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHT-GEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHH-CCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcC-CCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            47899999999999988888877655 4789999999999999999999999875

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.8e-10  Score=52.55  Aligned_cols=34  Identities=18%  Similarity=0.382  Sum_probs=32.1

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYAC   83 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C   83 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            8 GEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            57899999999999999999999999999 99987

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.99  E-value=2.4e-11  Score=60.94  Aligned_cols=54  Identities=11%  Similarity=0.138  Sum_probs=47.9

Q ss_pred             CCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHH-HhhCC
Q psy11364         24 PLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHM-ETHQN   78 (101)
Q Consensus        24 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~-~~h~~   78 (101)
                      ||.|+.|++.|...+.+..|...+. ++++|.|..|++.|.....|..|+ ++|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHT-NEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTT-SSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhC-CCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            6899999999999998888877765 578999999999999999999997 67875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.1e-10  Score=53.43  Aligned_cols=41  Identities=24%  Similarity=0.337  Sum_probs=35.9

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|+
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGT-GEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSC-CCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccC-CCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444 58899999999999999999999999999 999996

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.1e-10  Score=52.94  Aligned_cols=41  Identities=22%  Similarity=0.404  Sum_probs=35.4

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|.
T Consensus         3 H~~~H~-~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGT-DSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCC-CCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCC-CCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            334444 57899999999999999999999999999 999884

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.3e-10  Score=52.64  Aligned_cols=39  Identities=31%  Similarity=0.422  Sum_probs=34.0

Q ss_pred             CCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCccc
Q psy11364         44 GGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYAC   83 (101)
Q Consensus        44 ~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C   83 (101)
                      .+++. ++++|.|..|++.|.....|..|+++|++ +||.|
T Consensus         3 ~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSG-GEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCC-SCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccC-CCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34444 57899999999999999999999999999 99987

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=4.8e-10  Score=51.90  Aligned_cols=34  Identities=21%  Similarity=0.360  Sum_probs=32.2

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYAC   83 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C   83 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            57899999999999999999999999999 99987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.7e-11  Score=62.22  Aligned_cols=58  Identities=21%  Similarity=0.287  Sum_probs=48.9

Q ss_pred             CCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCCCCcccccCccccCChHHHhcccC
Q psy11364         37 ASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .+.+..|.+++. ++++|.|..|++.|.....|..      .+||.|+.||+.|...+.|..|++
T Consensus         3 ~~~l~~H~~~h~-~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~   60 (73)
T 2ctu_A            3 SGSSGKRQKIHL-GDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEG   60 (73)
T ss_dssp             CCSCCCCCCCCC-CCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSS
T ss_pred             chhHHHHHHHhC-CCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHH
Confidence            345667777665 5889999999999998887765      589999999999999999999874

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.2e-09  Score=51.37  Aligned_cols=41  Identities=27%  Similarity=0.316  Sum_probs=35.1

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      |..++. ++++|.|..|++.|.....|..|+++|++ +||.|.
T Consensus         3 H~~~H~-~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGSSGS-GEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCC-CCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcccC-CCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            344444 58899999999999999999999999999 999863

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.93  E-value=1.6e-11  Score=62.74  Aligned_cols=57  Identities=12%  Similarity=0.137  Sum_probs=48.7

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCC-CCCCCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGS-SNHSKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~-~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ..+|.|+.||+.|...+.+..|... +..++++|.|..|++.|.....|..|++.|.+
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3579999999999998888877766 42468899999999999999999999998753

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=5e-09  Score=54.29  Aligned_cols=38  Identities=18%  Similarity=0.165  Sum_probs=33.7

Q ss_pred             CCCCcceeccc--chhhcCCHHHHHHHH-HhhCC-CCccccc
Q psy11364         48 NHSKLFATCFV--CGKQLSNQYNLRVHM-ETHQN-AFYACSS   85 (101)
Q Consensus        48 ~~~~~~~~C~~--c~~~~~~~~~l~~h~-~~h~~-kp~~C~~   85 (101)
                      ..+++||.|..  |+++|.....|..|+ ++|++ |||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            34689999965  999999999999997 68999 9999965

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=8e-10  Score=58.19  Aligned_cols=59  Identities=22%  Similarity=0.334  Sum_probs=49.4

Q ss_pred             CCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         38 SGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +.+..|..... .++++.|..|++.| ....|..|+ .|.+ +|+.|+.|++.|. ...|..|+
T Consensus         3 ~~L~~H~~~~c-~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~   62 (75)
T 2d9k_A            3 SGSSGHEETEC-PLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHP   62 (75)
T ss_dssp             CCCSCCCCCCC-CCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHH
T ss_pred             hHHHhhCcccC-CCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHH
Confidence            45666766655 48999999999999 488999999 8888 9999999999987 48888875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.89  E-value=4.9e-11  Score=58.79  Aligned_cols=41  Identities=22%  Similarity=0.274  Sum_probs=36.5

Q ss_pred             hhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         61 KQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        61 ~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +.|.....|..|+++|++ +||.|.+||+.|...+.|..|++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   45 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH
Confidence            556777778899999999 99999999999999999999863

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.4e-11  Score=63.17  Aligned_cols=59  Identities=14%  Similarity=0.097  Sum_probs=50.4

Q ss_pred             ccCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecc-cchhhcCCHHHHHHHHHhhCC-CC
Q psy11364         19 HCLTSPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCF-VCGKQLSNQYNLRVHMETHQN-AF   80 (101)
Q Consensus        19 ~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~-~c~~~~~~~~~l~~h~~~h~~-kp   80 (101)
                      .+...|+.|..||+.|. .+.+..|..+  .+++||.|. .|++.|.....|..|+++|.. +|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~--~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ--CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH--CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH--cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            44456899999999999 8888877766  468999999 999999999999999999876 44

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=4.5e-11  Score=62.97  Aligned_cols=63  Identities=17%  Similarity=0.246  Sum_probs=52.2

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCCCCCC--CCcceecccchhhcCCHHHHHHHH-HhhCC-CCcccc
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGGSSNH--SKLFATCFVCGKQLSNQYNLRVHM-ETHQN-AFYACS   84 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~--~~~~~~C~~c~~~~~~~~~l~~h~-~~h~~-kp~~C~   84 (101)
                      ..+|.|..|++.|...+.+..|..++..  .+++|.|..|++.|.....|..|+ ..|.+ ++....
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            4589999999999999888877766543  368999999999999999999999 56777 666543

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.8e-09  Score=50.46  Aligned_cols=42  Identities=24%  Similarity=0.287  Sum_probs=35.5

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC--CCccccc
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN--AFYACSS   85 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~--kp~~C~~   85 (101)
                      |.+++. ++++|.|..|++.|.....|..|+++|++  +||.|++
T Consensus         3 H~~~H~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQ-KEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCC-CSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccC-CCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444444 57899999999999999999999999986  7999863

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.83  E-value=1e-10  Score=61.49  Aligned_cols=57  Identities=14%  Similarity=0.171  Sum_probs=47.8

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCC-CCCCCCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         22 TSPLSSSIPGSSKTKASGSGTTGG-SSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        22 ~~~~~c~~c~~~~~~~~~~~~~~~-~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ..+|.|+.|++.|.....+..|.. .+...+++|.|..|++.|.....|..|++.+.+
T Consensus        13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           13 EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            358999999999999988888865 344334799999999999999999999997554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.82  E-value=3.7e-09  Score=48.31  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=31.7

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYAC   83 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C   83 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            47899999999999999999999999999 99875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.82  E-value=3.5e-09  Score=46.78  Aligned_cols=31  Identities=19%  Similarity=0.239  Sum_probs=28.8

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC-CCcc
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN-AFYA   82 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~   82 (101)
                      +||.|..|++.|.....|..|+++|++ +||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            478999999999999999999999999 8885

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.73  E-value=2.5e-10  Score=65.43  Aligned_cols=53  Identities=13%  Similarity=0.108  Sum_probs=48.1

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      .||.|+.||+.|...+.+..|..++   +++|.|..|++.|.....|..|++.|++
T Consensus        73 ~~~~C~~C~k~f~~~~~l~~H~~~H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           73 SQFVCPLCLMPFSSSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHT---CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             CCeECCCCCcccCCHhHHHHHHHHC---CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            5899999999999998888777664   6789999999999999999999999986

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.73  E-value=1.2e-09  Score=49.30  Aligned_cols=29  Identities=21%  Similarity=0.289  Sum_probs=20.0

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++++|.|..|++.|.....|..|+++|++
T Consensus         8 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            8 GIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            36667777777777777777777766653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.73  E-value=6.7e-09  Score=56.27  Aligned_cols=39  Identities=15%  Similarity=0.244  Sum_probs=36.0

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCcc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSH   88 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k   88 (101)
                      ++++|.|..|++.|.....|..|+++|++ +||.|..|.+
T Consensus        22 ~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           22 QNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER   61 (88)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             CCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence            58899999999999999999999999999 9999987653

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=2.8e-09  Score=49.39  Aligned_cols=30  Identities=17%  Similarity=0.357  Sum_probs=27.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++||+.|...+.|..|++
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   32 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR   32 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGG
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHH
Confidence            5678899 99999999999999999999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=3.2e-09  Score=49.26  Aligned_cols=30  Identities=20%  Similarity=0.381  Sum_probs=27.0

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|..|++
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   32 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR   32 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHH
Confidence            4567888 99999999999999999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=2.4e-09  Score=50.19  Aligned_cols=30  Identities=27%  Similarity=0.496  Sum_probs=27.4

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQK   33 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHT
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHH
Confidence            5678999 99999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=2.2e-09  Score=49.77  Aligned_cols=29  Identities=17%  Similarity=0.415  Sum_probs=26.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |+++|++ +||.|++|++.|...+.|..|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   30 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQ   30 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHH
Confidence            4567888 9999999999999999999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.63  E-value=1.8e-10  Score=59.82  Aligned_cols=55  Identities=15%  Similarity=0.214  Sum_probs=47.5

Q ss_pred             CCCCCCC--CCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhhC
Q psy11364         22 TSPLSSS--IPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        22 ~~~~~c~--~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      ..+|.|+  .|++.|...+.+..|...+. ++++|.|..|++.|.....|..|+++|+
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHT-GQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHH-CCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhC-CCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3589997  69999999888887776655 4789999999999999999999998874

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.63  E-value=2.2e-09  Score=49.79  Aligned_cols=30  Identities=23%  Similarity=0.475  Sum_probs=26.7

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|.+.+.|..|++
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   31 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQR   31 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHG
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHH
Confidence            4567888 99999999999999999999864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=4.3e-09  Score=49.85  Aligned_cols=30  Identities=20%  Similarity=0.378  Sum_probs=27.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|.....|.+|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS   33 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTT
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHH
Confidence            4678899 99999999999999999999974

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.62  E-value=4.2e-08  Score=43.32  Aligned_cols=31  Identities=23%  Similarity=0.339  Sum_probs=27.5

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AF   80 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp   80 (101)
                      ++++|.|..|++.|.....|..|+++|++ +|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47889999999999999999999999987 54

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=4.2e-09  Score=49.82  Aligned_cols=30  Identities=20%  Similarity=0.392  Sum_probs=27.3

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRG   33 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHT
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHH
Confidence            5678899 99999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=4.3e-09  Score=49.23  Aligned_cols=31  Identities=23%  Similarity=0.412  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|+.||+.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR   33 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHT
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhh
Confidence            36678999 99999999999999999999874

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=3.9e-09  Score=49.92  Aligned_cols=31  Identities=16%  Similarity=0.403  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQR   33 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGG
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            36678999 99999999999999999999974

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=4.2e-08  Score=43.99  Aligned_cols=31  Identities=26%  Similarity=0.402  Sum_probs=27.8

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AF   80 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp   80 (101)
                      ++++|.|..|++.|.....|..|+++|++ +|
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            6 SGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            47889999999999999999999999987 64

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=2.8e-09  Score=50.06  Aligned_cols=30  Identities=17%  Similarity=0.343  Sum_probs=27.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|.+|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHER   33 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHG
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHh
Confidence            5678999 99999999999999999999864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=3.6e-09  Score=50.11  Aligned_cols=30  Identities=20%  Similarity=0.452  Sum_probs=27.4

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|..|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQR   33 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHT
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHH
Confidence            5678999 99999999999999999999974

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=3.9e-09  Score=49.92  Aligned_cols=31  Identities=23%  Similarity=0.408  Sum_probs=27.9

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|+.|++.|...+.|.+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK   33 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            36678999 99999999999999999999974

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=3.6e-09  Score=50.09  Aligned_cols=30  Identities=17%  Similarity=0.451  Sum_probs=27.3

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQK   33 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGG
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            5678999 99999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=4.6e-09  Score=49.68  Aligned_cols=30  Identities=20%  Similarity=0.408  Sum_probs=27.3

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRG   33 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhH
Confidence            5678899 99999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=4.7e-09  Score=49.65  Aligned_cols=30  Identities=23%  Similarity=0.399  Sum_probs=27.3

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|.....|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQK   33 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHT
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHH
Confidence            5678888 99999999999999999999974

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=5.9e-09  Score=49.31  Aligned_cols=30  Identities=23%  Similarity=0.366  Sum_probs=27.3

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|.+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMR   33 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHT
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHH
Confidence            5678899 99999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=4.6e-09  Score=49.66  Aligned_cols=31  Identities=19%  Similarity=0.402  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV   33 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHT
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHH
Confidence            36678999 99999999999999999999974

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.59  E-value=4.3e-08  Score=43.41  Aligned_cols=31  Identities=19%  Similarity=0.334  Sum_probs=27.1

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC-CC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN-AF   80 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp   80 (101)
                      ++++|.|..|++.|.....|..|+++|++ +|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47889999999999999999999999887 54

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=5.4e-09  Score=49.42  Aligned_cols=30  Identities=13%  Similarity=0.328  Sum_probs=27.3

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|.....|.+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR   33 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHT
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHH
Confidence            5678999 99999999999999999999974

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=5.1e-09  Score=49.46  Aligned_cols=31  Identities=16%  Similarity=0.401  Sum_probs=27.8

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|++|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR   33 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHT
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHH
Confidence            36678999 99999999999999999999974

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=5.3e-09  Score=49.48  Aligned_cols=30  Identities=20%  Similarity=0.331  Sum_probs=27.1

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR   33 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGG
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHH
Confidence            5678899 99999999999999999999974

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=5.4e-09  Score=49.38  Aligned_cols=31  Identities=13%  Similarity=0.184  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQR   33 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHT
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHH
Confidence            36678999 99999999999999999999974

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.59  E-value=1.3e-08  Score=46.17  Aligned_cols=30  Identities=30%  Similarity=0.550  Sum_probs=24.4

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCCCCccccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSS   85 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~   85 (101)
                      +++||.|..|++.|...+.|..|+      ||.|..
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~------py~C~~   34 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ------AYYCSH   34 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH------HHTSTT
T ss_pred             CccCeECCCCCCccCCHhHccCcC------CeECcC
Confidence            578888888888888888888886      777753

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=5.3e-09  Score=49.58  Aligned_cols=30  Identities=17%  Similarity=0.305  Sum_probs=27.3

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWR   33 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHT
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhH
Confidence            5678999 99999999999999999999974

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=5.2e-09  Score=49.49  Aligned_cols=30  Identities=20%  Similarity=0.408  Sum_probs=27.3

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRG   33 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGG
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhh
Confidence            5678999 99999999999999999999974

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.59  E-value=4.8e-09  Score=49.60  Aligned_cols=31  Identities=16%  Similarity=0.333  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQN   33 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGG
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHH
Confidence            36678999 99999999999999999999874

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.7e-09  Score=49.51  Aligned_cols=30  Identities=20%  Similarity=0.284  Sum_probs=26.7

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|.+.+.|..|++
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   32 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL   32 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTH
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHH
Confidence            4567888 99999999999999999999863

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=5.9e-09  Score=49.31  Aligned_cols=31  Identities=16%  Similarity=0.374  Sum_probs=27.6

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|..|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR   33 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            35678999 99999999999999999999864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=5.5e-09  Score=49.43  Aligned_cols=31  Identities=13%  Similarity=0.333  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR   33 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGG
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHH
Confidence            36678999 99999999999999999999874

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=6.9e-08  Score=44.26  Aligned_cols=30  Identities=23%  Similarity=0.608  Sum_probs=26.8

Q ss_pred             CCCcceeccc--chhhcCCHHHHHHHHHhhCC
Q psy11364         49 HSKLFATCFV--CGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        49 ~~~~~~~C~~--c~~~~~~~~~l~~h~~~h~~   78 (101)
                      .+++||.|..  |++.|.....|..|+++|++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            3588999986  99999999999999999986

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=3.5e-09  Score=50.08  Aligned_cols=30  Identities=20%  Similarity=0.461  Sum_probs=27.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQR   33 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHG
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHh
Confidence            5678999 99999999999999999999864

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.58  E-value=4.8e-09  Score=49.61  Aligned_cols=31  Identities=23%  Similarity=0.443  Sum_probs=27.8

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK   33 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHT
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHH
Confidence            36678999 99999999999999999999874

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=4.3e-09  Score=49.82  Aligned_cols=30  Identities=17%  Similarity=0.449  Sum_probs=27.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|..|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHER   33 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHT
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHH
Confidence            5678899 99999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=3.7e-09  Score=50.06  Aligned_cols=30  Identities=17%  Similarity=0.350  Sum_probs=26.9

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|.+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKR   33 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHH
Confidence            5678899 99999999999999999999863

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=5e-09  Score=49.54  Aligned_cols=31  Identities=23%  Similarity=0.475  Sum_probs=27.8

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|++|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR   33 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHT
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHh
Confidence            36678999 99999999999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=6e-09  Score=49.29  Aligned_cols=30  Identities=17%  Similarity=0.409  Sum_probs=26.8

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|.....|..|++
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQR   33 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGG
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHH
Confidence            4567888 99999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=5e-09  Score=49.48  Aligned_cols=31  Identities=19%  Similarity=0.385  Sum_probs=27.6

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQR   33 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHG
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHH
Confidence            36678999 99999999999999999999864

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.57  E-value=4.5e-09  Score=49.76  Aligned_cols=31  Identities=16%  Similarity=0.355  Sum_probs=27.6

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|++|++.|...+.|.+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR   33 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHH
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHH
Confidence            36678999 99999999999999999999863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=4.9e-09  Score=49.51  Aligned_cols=31  Identities=16%  Similarity=0.385  Sum_probs=27.6

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRR   33 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGG
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHH
Confidence            35678899 99999999999999999999974

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.2e-09  Score=49.75  Aligned_cols=30  Identities=20%  Similarity=0.368  Sum_probs=26.6

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.||+.|...+.|..|++
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   31 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQ   31 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHH
Confidence            4567888 99999999999999999999863

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=5.3e-09  Score=49.41  Aligned_cols=31  Identities=16%  Similarity=0.404  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR   33 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHT
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            36678999 99999999999999999999974

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=5.1e-09  Score=49.45  Aligned_cols=31  Identities=19%  Similarity=0.404  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA   33 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHT
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHH
Confidence            36678999 99999999999999999999874

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=4.3e-09  Score=49.77  Aligned_cols=31  Identities=23%  Similarity=0.432  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|++||+.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR   33 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHG
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHH
Confidence            36678999 99999999999999999999864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.6e-09  Score=50.08  Aligned_cols=30  Identities=17%  Similarity=0.399  Sum_probs=27.1

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|..|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRR   33 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHH
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHH
Confidence            5678999 99999999999999999999863

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=5.5e-09  Score=49.38  Aligned_cols=30  Identities=23%  Similarity=0.448  Sum_probs=27.3

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQL   33 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHT
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            5678899 99999999999999999999974

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=5.6e-09  Score=49.37  Aligned_cols=30  Identities=20%  Similarity=0.308  Sum_probs=27.1

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|.+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHM   33 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGG
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHH
Confidence            5678899 99999999999999999999974

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.56  E-value=5.2e-09  Score=49.43  Aligned_cols=31  Identities=19%  Similarity=0.373  Sum_probs=27.8

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|+.||+.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR   33 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGG
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHH
Confidence            36678999 99999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.56  E-value=3.6e-09  Score=50.11  Aligned_cols=30  Identities=13%  Similarity=0.341  Sum_probs=27.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQR   33 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHH
Confidence            6678999 99999999999999999999863

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=4.6e-09  Score=49.67  Aligned_cols=30  Identities=23%  Similarity=0.401  Sum_probs=27.4

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +|+++|++ +||.|+.|++.|...+.|..|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQ   32 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHH
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHH
Confidence            46778999 9999999999999999999986

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=3.7e-09  Score=50.05  Aligned_cols=30  Identities=17%  Similarity=0.269  Sum_probs=27.3

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .|+++|++ +||.|++||+.|...+.|..|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   32 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHL   32 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHH
Confidence            36678999 9999999999999999999986

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.55  E-value=5.8e-09  Score=49.27  Aligned_cols=30  Identities=23%  Similarity=0.414  Sum_probs=27.3

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQR   33 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGG
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHH
Confidence            6678999 99999999999999999999874

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=6e-08  Score=43.75  Aligned_cols=32  Identities=25%  Similarity=0.459  Sum_probs=29.3

Q ss_pred             CCcceecc--cchhhcCCHHHHHHHHHhhCC-CCc
Q psy11364         50 SKLFATCF--VCGKQLSNQYNLRVHMETHQN-AFY   81 (101)
Q Consensus        50 ~~~~~~C~--~c~~~~~~~~~l~~h~~~h~~-kp~   81 (101)
                      ++++|.|.  .|++.|.....|..|+++|++ +||
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            47889999  599999999999999999998 887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.55  E-value=4.4e-09  Score=49.80  Aligned_cols=30  Identities=23%  Similarity=0.379  Sum_probs=27.1

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|.+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHK   33 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHH
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHH
Confidence            5678999 99999999999999999999863

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=4.9e-09  Score=49.53  Aligned_cols=30  Identities=20%  Similarity=0.424  Sum_probs=27.3

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +|+++|++ +||.|+.|++.|...+.|..|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHE   32 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHH
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHH
Confidence            36678999 9999999999999999999986

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=3.9e-09  Score=49.45  Aligned_cols=30  Identities=23%  Similarity=0.449  Sum_probs=27.1

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +|+++|++ +||.|+.|++.|...+.|..|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHE   32 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHH
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHh
Confidence            36678999 9999999999999999999986

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=6.2e-09  Score=49.19  Aligned_cols=31  Identities=16%  Similarity=0.373  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|++|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQR   33 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGG
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            36678899 99999999999999999999974

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=6.7e-09  Score=49.08  Aligned_cols=31  Identities=13%  Similarity=0.337  Sum_probs=27.9

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|++||+.|...+.|..|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR   33 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGG
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHH
Confidence            46778999 99999999999999999999874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=6.1e-09  Score=48.76  Aligned_cols=31  Identities=26%  Similarity=0.423  Sum_probs=27.6

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQK   33 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGG
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            36678999 99999999999999999999874

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=5.2e-09  Score=49.43  Aligned_cols=31  Identities=26%  Similarity=0.409  Sum_probs=27.6

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|++||+.|...+.|..|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK   33 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHH
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHH
Confidence            36678999 99999999999999999999863

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=5.3e-09  Score=49.41  Aligned_cols=31  Identities=19%  Similarity=0.417  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|++|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQR   33 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHG
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHH
Confidence            36678999 99999999999999999999864

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=4.4e-09  Score=49.72  Aligned_cols=31  Identities=19%  Similarity=0.425  Sum_probs=27.5

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRR   33 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTH
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHH
Confidence            35678999 99999999999999999999863

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=4e-09  Score=49.90  Aligned_cols=31  Identities=16%  Similarity=0.341  Sum_probs=27.5

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|+.||+.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQR   33 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHH
Confidence            36678999 99999999999999999999863

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=6.5e-09  Score=49.16  Aligned_cols=31  Identities=13%  Similarity=0.265  Sum_probs=27.8

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|++||+.|...+.|..|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR   33 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHT
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHH
Confidence            36678999 99999999999999999999974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=5.6e-09  Score=49.40  Aligned_cols=30  Identities=17%  Similarity=0.298  Sum_probs=27.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|..|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLR   33 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            5678999 99999999999999999999863

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.54  E-value=4.2e-09  Score=48.78  Aligned_cols=29  Identities=21%  Similarity=0.426  Sum_probs=26.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |+++|++ +||.|++||+.|...+.|..|+
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~   31 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQ   31 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHh
Confidence            4567888 9999999999999999999986

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=4.7e-09  Score=49.08  Aligned_cols=30  Identities=17%  Similarity=0.379  Sum_probs=27.1

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .|+++|++ +||.|+.|++.|...+.|..|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQ   32 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHH
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHH
Confidence            36678999 9999999999999999999986

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=6.6e-09  Score=49.06  Aligned_cols=31  Identities=16%  Similarity=0.329  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|++||+.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR   33 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHG
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHH
Confidence            36678999 99999999999999999999864

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=4.8e-09  Score=49.59  Aligned_cols=31  Identities=16%  Similarity=0.313  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|++||+.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV   33 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHH
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHH
Confidence            36678999 99999999999999999999863

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=4.4e-09  Score=49.74  Aligned_cols=30  Identities=23%  Similarity=0.416  Sum_probs=27.3

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +|+++|++ +||.|+.|++.|...+.|..|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   32 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQ   32 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHH
Confidence            36678999 9999999999999999999986

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=4.4e-09  Score=49.68  Aligned_cols=31  Identities=23%  Similarity=0.447  Sum_probs=27.5

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQA   33 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHH
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHH
Confidence            36678999 99999999999999999999863

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=3.8e-09  Score=50.03  Aligned_cols=31  Identities=16%  Similarity=0.292  Sum_probs=27.6

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|++|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR   33 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHH
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHH
Confidence            36678999 99999999999999999999863

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=7.1e-09  Score=48.95  Aligned_cols=31  Identities=19%  Similarity=0.256  Sum_probs=27.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQR   33 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHT
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHH
Confidence            36678999 99999999999999999999874

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=5.9e-09  Score=49.28  Aligned_cols=30  Identities=23%  Similarity=0.358  Sum_probs=27.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|..|++
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK   33 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHT
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            5678889 99999999999999999999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=4.6e-09  Score=49.68  Aligned_cols=30  Identities=17%  Similarity=0.161  Sum_probs=27.1

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .|+++|++ +||.|.+|++.|...+.|..|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   32 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHL   32 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHH
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHH
Confidence            36678999 9999999999999999999986

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=4.4e-09  Score=49.78  Aligned_cols=31  Identities=19%  Similarity=0.403  Sum_probs=27.5

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|++|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ   33 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHH
Confidence            36678999 99999999999999999999863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=4.6e-09  Score=49.67  Aligned_cols=31  Identities=23%  Similarity=0.414  Sum_probs=27.6

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|++|++.|...+.|.+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK   33 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHH
Confidence            36678999 99999999999999999999863

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=5.1e-09  Score=49.47  Aligned_cols=31  Identities=13%  Similarity=0.211  Sum_probs=27.6

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ +||.|+.|++.|...+.|.+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQR   33 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHH
Confidence            36678999 99999999999999999999863

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=6.1e-09  Score=49.32  Aligned_cols=30  Identities=13%  Similarity=0.347  Sum_probs=26.9

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|.+|++
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR   33 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHH
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHH
Confidence            5667888 99999999999999999999863

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=5.6e-09  Score=49.32  Aligned_cols=30  Identities=17%  Similarity=0.398  Sum_probs=27.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|..|++.|...+.|..|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQR   33 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHH
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHH
Confidence            6678999 99999999999999999999863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=6.4e-09  Score=49.20  Aligned_cols=30  Identities=13%  Similarity=0.425  Sum_probs=27.0

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR   33 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHH
Confidence            5678999 99999999999999999999863

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.52  E-value=2.7e-07  Score=47.35  Aligned_cols=39  Identities=21%  Similarity=0.311  Sum_probs=32.4

Q ss_pred             CCCcceecccchhhcCCHHHHHHHHHhhCCCCcccccCc
Q psy11364         49 HSKLFATCFVCGKQLSNQYNLRVHMETHQNAFYACSSCS   87 (101)
Q Consensus        49 ~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~kp~~C~~C~   87 (101)
                      ..++||.|..|++.|.....|..|+++|++....+.+++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~   47 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYID   47 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCC
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCCcccccccc
Confidence            358999999999999999999999999998434455544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=5.1e-09  Score=49.47  Aligned_cols=30  Identities=13%  Similarity=0.207  Sum_probs=27.1

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .|+++|++ +||.|+.||+.|.+.+.|..|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   32 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQ   32 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHH
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHH
Confidence            36678999 9999999999999999999986

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=6.5e-09  Score=49.12  Aligned_cols=30  Identities=17%  Similarity=0.354  Sum_probs=27.0

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .|+++|++ +||.|++|++.|...+.|..|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHS   32 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHH
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHH
Confidence            35678899 9999999999999999999986

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=5e-09  Score=49.07  Aligned_cols=30  Identities=20%  Similarity=0.379  Sum_probs=27.2

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|..|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~   33 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQK   33 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHH
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHH
Confidence            5678999 99999999999999999999963

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=7.2e-09  Score=46.61  Aligned_cols=28  Identities=18%  Similarity=0.424  Sum_probs=25.1

Q ss_pred             HhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         74 ETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        74 ~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++|++ +||.|..|++.|...+.|..|++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIK   30 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHH
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHH
Confidence            46888 99999999999999999999863

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=5.7e-09  Score=49.29  Aligned_cols=29  Identities=17%  Similarity=0.379  Sum_probs=26.7

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |+++|++ +||.|+.|++.|...+.|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQ   32 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHH
Confidence            5678899 9999999999999999999986

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=6.7e-09  Score=49.09  Aligned_cols=30  Identities=20%  Similarity=0.367  Sum_probs=27.2

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .|+++|++ +||.|+.|++.|...+.|..|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQ   32 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHH
Confidence            36678999 9999999999999999999986

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=5.7e-09  Score=47.18  Aligned_cols=29  Identities=24%  Similarity=0.374  Sum_probs=24.0

Q ss_pred             CCcceecccchhhcCCHHHHHHH-HHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVH-METHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h-~~~h~~   78 (101)
                      +++||.|..|++.|.....|..| +++|++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            6 SGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            47888888888888888888888 777764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=6.1e-09  Score=49.28  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=27.0

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLR   33 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHH
Confidence            5678899 99999999999999999999863

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=5.9e-09  Score=49.28  Aligned_cols=31  Identities=19%  Similarity=0.358  Sum_probs=27.5

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|+.|++.|.+.+.|..|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR   33 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHH
Confidence            36678999 99999999999999999999863

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6.8e-09  Score=49.07  Aligned_cols=30  Identities=10%  Similarity=0.254  Sum_probs=26.9

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|..|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQR   33 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHH
Confidence            5678899 99999999999999999999863

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.49  E-value=2.3e-08  Score=47.87  Aligned_cols=29  Identities=28%  Similarity=0.469  Sum_probs=21.7

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHh-hCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMET-HQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~-h~~   78 (101)
                      ++++|.|..|++.|.....|..|++. |++
T Consensus         4 ~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            4 RDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             TTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            46778888888888888888888766 444

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.49  E-value=5.5e-08  Score=44.10  Aligned_cols=25  Identities=24%  Similarity=0.412  Sum_probs=22.9

Q ss_pred             hCC-CCcccccCccccCChHHHhccc
Q psy11364         76 HQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        76 h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +++ +||.|.+|||+|.+.++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            456 9999999999999999999996

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=1.9e-07  Score=41.42  Aligned_cols=29  Identities=28%  Similarity=0.365  Sum_probs=26.0

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++++|.|..|++.|.....|..|+++|++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            47889999999999999999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=7.4e-09  Score=48.93  Aligned_cols=29  Identities=14%  Similarity=0.217  Sum_probs=26.6

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |+++|++ +||.|++||+.|...+.|..|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQ   32 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHH
Confidence            5678899 9999999999999999999986

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.48  E-value=3.2e-08  Score=43.84  Aligned_cols=27  Identities=15%  Similarity=0.314  Sum_probs=24.3

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|++ +||.|..|++.|...+.|.+|++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~   28 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLK   28 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHG
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHH
Confidence            3678 99999999999999999999864

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=7.7e-09  Score=48.86  Aligned_cols=31  Identities=19%  Similarity=0.401  Sum_probs=27.4

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|+++|++ +||.|++|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR   33 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHH
Confidence            35678999 99999999999999999999863

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.48  E-value=1.1e-08  Score=48.39  Aligned_cols=30  Identities=20%  Similarity=0.340  Sum_probs=27.0

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|.....|..|++
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR   33 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHG
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            5678899 99999999999999999999864

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.48  E-value=2.6e-08  Score=44.07  Aligned_cols=27  Identities=26%  Similarity=0.352  Sum_probs=24.1

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|++ +||.|..|++.|...+.|..|++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~   28 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIR   28 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHH
Confidence            3677 99999999999999999999863

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=2.3e-07  Score=41.23  Aligned_cols=29  Identities=28%  Similarity=0.451  Sum_probs=26.0

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++++|.|..|++.|.....|..|+++|++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            47889999999999999999999998876

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.47  E-value=2e-07  Score=41.67  Aligned_cols=30  Identities=20%  Similarity=0.380  Sum_probs=27.0

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|+.|++.|...+.|..|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~   32 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHH
Confidence            5678899 99999999999999999999864

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=2.3e-07  Score=41.25  Aligned_cols=29  Identities=31%  Similarity=0.501  Sum_probs=26.3

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      .+++|.|..|++.|.....|..|+++|++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            47889999999999999999999999886

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1.2e-08  Score=47.81  Aligned_cols=30  Identities=17%  Similarity=0.337  Sum_probs=26.5

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|..|++
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQA   33 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHH
Confidence            4567888 99999999999999999999863

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=9.1e-09  Score=48.65  Aligned_cols=30  Identities=20%  Similarity=0.349  Sum_probs=26.8

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|..|++
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQR   33 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHH
Confidence            4567888 99999999999999999999863

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=8e-09  Score=48.80  Aligned_cols=30  Identities=17%  Similarity=0.434  Sum_probs=27.1

Q ss_pred             HHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+++|++ +||.|++|++.|...+.|..|++
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQR   33 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHH
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHH
Confidence            5678999 99999999999999999999863

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=3e-07  Score=40.73  Aligned_cols=29  Identities=28%  Similarity=0.449  Sum_probs=25.8

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      .+++|.|..|++.|.....|..|+++|++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            47889999999999999999999998876

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.44  E-value=1.5e-07  Score=39.09  Aligned_cols=26  Identities=19%  Similarity=0.378  Sum_probs=20.4

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      ++|.|..|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            56788888888888888888887764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.43  E-value=3.6e-09  Score=46.38  Aligned_cols=29  Identities=21%  Similarity=0.258  Sum_probs=20.5

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC-CCc
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN-AFY   81 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~   81 (101)
                      ||.|..|++.|.....|..|+++|++ +||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            56677777777777777777777776 665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.43  E-value=1.8e-07  Score=39.48  Aligned_cols=28  Identities=29%  Similarity=0.466  Sum_probs=24.6

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +++|.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            3678999999999999999999998876

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=2e-07  Score=41.45  Aligned_cols=29  Identities=28%  Similarity=0.624  Sum_probs=25.0

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++++|.|..|++.|.....|..|+++|++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            46789999999999999999999888875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.40  E-value=2e-09  Score=55.66  Aligned_cols=53  Identities=19%  Similarity=0.202  Sum_probs=45.6

Q ss_pred             CCCCCCC--CCCCCccCCCCCCCCCCCCCCCcceeccc--chhhcCCHHHHHHHHHhh
Q psy11364         23 SPLSSSI--PGSSKTKASGSGTTGGSSNHSKLFATCFV--CGKQLSNQYNLRVHMETH   76 (101)
Q Consensus        23 ~~~~c~~--c~~~~~~~~~~~~~~~~~~~~~~~~~C~~--c~~~~~~~~~l~~h~~~h   76 (101)
                      .++.|..  |++.|...+.+..|..++. ++++|.|..  |++.|.....|..|+++|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~-~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHT-GEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHS-SSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcC-CCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            5889988  9999999888888877665 588999964  999999999999998765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.40  E-value=1.5e-07  Score=39.34  Aligned_cols=27  Identities=30%  Similarity=0.559  Sum_probs=20.7

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++|.|..|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            567888888888888888888777653

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.40  E-value=1.3e-07  Score=39.49  Aligned_cols=25  Identities=20%  Similarity=0.376  Sum_probs=17.4

Q ss_pred             cceecccchhhcCCHHHHHHHHHhh
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETH   76 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h   76 (101)
                      +||.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4667777777777777777776655

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1e-07  Score=42.42  Aligned_cols=27  Identities=15%  Similarity=0.342  Sum_probs=24.4

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|++ +||.|.+|++.|...+.|..|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHML   30 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            4677 99999999999999999999974

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.39  E-value=2.8e-07  Score=38.66  Aligned_cols=27  Identities=30%  Similarity=0.536  Sum_probs=23.0

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++|.|..|++.|.....|..|+++|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            468899999999999999999888875

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=6e-08  Score=45.70  Aligned_cols=29  Identities=21%  Similarity=0.295  Sum_probs=26.0

Q ss_pred             HHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         73 METHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        73 ~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +++|++ +||.|++|++.|.....|..|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWI   33 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHT
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHH
Confidence            356888 99999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=6.8e-08  Score=44.34  Aligned_cols=28  Identities=21%  Similarity=0.587  Sum_probs=25.1

Q ss_pred             HhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         74 ETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        74 ~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++|++ +||.|+.|++.|...+.|..|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   31 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHER   31 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGG
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHH
Confidence            35788 99999999999999999999974

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=4.6e-08  Score=43.88  Aligned_cols=29  Identities=21%  Similarity=0.323  Sum_probs=24.7

Q ss_pred             CCcceecccchhhcCCH-HHHHHHHHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQ-YNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~-~~l~~h~~~h~~   78 (101)
                      ++++|.|..|++.|... ..|..|+++|++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            6 SGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            47788999999999988 889999888875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=8.6e-08  Score=43.95  Aligned_cols=26  Identities=19%  Similarity=0.432  Sum_probs=23.2

Q ss_pred             hCC-CCccccc--CccccCChHHHhcccC
Q psy11364         76 HQN-AFYACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        76 h~~-kp~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      +++ +||.|++  |+++|...+.|.+|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r   32 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLK   32 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHH
Confidence            567 9999986  9999999999999974

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=7.8e-08  Score=42.74  Aligned_cols=27  Identities=26%  Similarity=0.461  Sum_probs=24.2

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|++ +||.|..|++.|...+.|..|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLR   30 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHH
Confidence            4777 99999999999999999999863

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3.8e-07  Score=40.73  Aligned_cols=27  Identities=15%  Similarity=0.267  Sum_probs=24.3

Q ss_pred             hhCC-CCcccccCccccCCh-HHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSR-DALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~-~~l~~H~~  101 (101)
                      +|++ +||.|+.|++.|... +.|..|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~   31 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIW   31 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHH
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHH
Confidence            5788 999999999999999 99998863

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.35  E-value=2.1e-07  Score=39.13  Aligned_cols=27  Identities=26%  Similarity=0.450  Sum_probs=21.6

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +||.|..|++.|.....|..|+++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            467888888888888888888887765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=5.1e-08  Score=46.00  Aligned_cols=29  Identities=14%  Similarity=0.242  Sum_probs=25.7

Q ss_pred             HHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         73 METHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        73 ~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +++|++ +||.|+.|++.|...+.|..|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRR   33 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHH
Confidence            356888 99999999999999999999863

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=1.2e-07  Score=42.08  Aligned_cols=27  Identities=19%  Similarity=0.412  Sum_probs=24.1

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|++ +||.|.+|++.|.....|..|++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKL   30 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHH
Confidence            4677 99999999999999999999863

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.33  E-value=3.7e-07  Score=38.48  Aligned_cols=27  Identities=22%  Similarity=0.434  Sum_probs=23.1

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++|.|..|++.|.....|..|+++|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc
Confidence            368899999999999999999888876

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.33  E-value=1.3e-07  Score=39.47  Aligned_cols=23  Identities=26%  Similarity=0.470  Sum_probs=21.4

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|+.||+.|...+.|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMR   24 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHH
Confidence            68999999999999999999974

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=3.4e-07  Score=38.33  Aligned_cols=27  Identities=33%  Similarity=0.556  Sum_probs=23.1

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++|.|..|++.|.....|..|+++|++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            468899999999999999999888875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=1.3e-07  Score=42.07  Aligned_cols=27  Identities=26%  Similarity=0.547  Sum_probs=24.2

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|++ +||.|.+|++.|...+.|..|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMN   30 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHH
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHH
Confidence            4778 99999999999999999999863

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.31  E-value=1.3e-07  Score=42.98  Aligned_cols=25  Identities=36%  Similarity=0.448  Sum_probs=22.4

Q ss_pred             hCC-CCcccccCccccCChHHHhccc
Q psy11364         76 HQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        76 h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |++ +||.|.+||+.|...+.|..|+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~   26 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHM   26 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHH
Confidence            567 8999999999999999999886

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.65  E-value=7.3e-08  Score=39.78  Aligned_cols=23  Identities=22%  Similarity=0.440  Sum_probs=18.3

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|+.||+.|...+.|..|++
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~   23 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIR   23 (26)
Confidence            57888888888888888888764

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=8e-08  Score=45.22  Aligned_cols=29  Identities=21%  Similarity=0.399  Sum_probs=25.9

Q ss_pred             HHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         73 METHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        73 ~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +++|++ +||.|++|++.|.....|..|++
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQR   33 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHT
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHH
Confidence            356888 99999999999999999999974

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=6e-07  Score=40.22  Aligned_cols=26  Identities=27%  Similarity=0.671  Sum_probs=24.1

Q ss_pred             HhhCC-CCcccccCccccCChHHHhcc
Q psy11364         74 ETHQN-AFYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        74 ~~h~~-kp~~C~~C~k~f~~~~~l~~H   99 (101)
                      ++|++ +||.|+.|++.|...+.|..|
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H   28 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRH   28 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHH
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHH
Confidence            46888 999999999999999999998

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=4.3e-07  Score=39.18  Aligned_cols=28  Identities=25%  Similarity=0.366  Sum_probs=23.6

Q ss_pred             Ccceecc--cchhhcCCHHHHHHHHHhhCC
Q psy11364         51 KLFATCF--VCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        51 ~~~~~C~--~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++||.|.  .|++.|.....|..|+++|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            3578888  899999999999999888876

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.28  E-value=4.5e-07  Score=38.86  Aligned_cols=27  Identities=30%  Similarity=0.514  Sum_probs=21.8

Q ss_pred             cceecc--cchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCF--VCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~--~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +||.|.  .|++.|.....|..|+++|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            467886  788888888888888888875

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.28  E-value=1.3e-07  Score=43.94  Aligned_cols=27  Identities=15%  Similarity=0.412  Sum_probs=24.5

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|++ +||.|+.|++.|...+.|..|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~   31 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTL   31 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHH
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHH
Confidence            5788 99999999999999999999863

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=1.8e-07  Score=43.75  Aligned_cols=28  Identities=18%  Similarity=0.514  Sum_probs=25.4

Q ss_pred             HhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         74 ETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        74 ~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++|++ +||.|..|++.|.....|..|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQR   33 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHH
Confidence            46888 99999999999999999999974

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.26  E-value=9.1e-07  Score=39.60  Aligned_cols=29  Identities=31%  Similarity=0.535  Sum_probs=25.4

Q ss_pred             CCcceecc--cchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCF--VCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~--~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++++|.|.  .|++.|.....|..|+++|++
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            47889998  499999999999999998876

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=4e-07  Score=38.05  Aligned_cols=27  Identities=26%  Similarity=0.460  Sum_probs=21.1

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++|.|..|++.|.....|..|+++|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            367788888888888888888887764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=2.1e-07  Score=41.33  Aligned_cols=27  Identities=19%  Similarity=0.554  Sum_probs=23.8

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      .|.+ +||.|+.|++.|.....|..|++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLR   30 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHH
Confidence            3567 89999999999999999999863

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.56  E-value=1.3e-07  Score=39.87  Aligned_cols=26  Identities=27%  Similarity=0.643  Sum_probs=18.9

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ||.|..|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            56777777777777777777777664

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=2e-07  Score=38.70  Aligned_cols=23  Identities=35%  Similarity=0.613  Sum_probs=21.2

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|..||+.|...+.|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLR   24 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHH
Confidence            68999999999999999999863

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.24  E-value=8.2e-07  Score=42.28  Aligned_cols=27  Identities=26%  Similarity=0.469  Sum_probs=24.0

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|++ +||.|.+||+.|.....|..|++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            4788 99999999999999999999863

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=2.3e-08  Score=48.94  Aligned_cols=44  Identities=14%  Similarity=0.037  Sum_probs=37.3

Q ss_pred             CCCCCCCCCCCCCCccCCCCCCCCC-CCCCCCcceecccchhhcCC
Q psy11364         21 LTSPLSSSIPGSSKTKASGSGTTGG-SSNHSKLFATCFVCGKQLSN   65 (101)
Q Consensus        21 ~~~~~~c~~c~~~~~~~~~~~~~~~-~~~~~~~~~~C~~c~~~~~~   65 (101)
                      ...+|.|+.|++.|...+.|..|.. ++. ++++|.|..|++.|.+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~-~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLNGHIKQVHT-SERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC-CCCCCCSSSSCCSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhcC-CCCCccCCCCCCCCCC
Confidence            3468999999999999999888875 555 5899999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.22  E-value=4e-07  Score=38.00  Aligned_cols=23  Identities=22%  Similarity=0.504  Sum_probs=21.3

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|..|++.|...+.|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~   24 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYR   24 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHT
T ss_pred             cCccCCCCCcccCCHHHHHHHHH
Confidence            68999999999999999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=2.3e-07  Score=43.43  Aligned_cols=27  Identities=19%  Similarity=0.442  Sum_probs=24.5

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|++ +||.|++|++.|...+.|..|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~   31 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVR   31 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHH
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHH
Confidence            5788 99999999999999999999863

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=1.7e-07  Score=39.73  Aligned_cols=27  Identities=22%  Similarity=0.450  Sum_probs=20.4

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++|.|..|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            467787888888877778777777764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.20  E-value=3.3e-07  Score=40.12  Aligned_cols=23  Identities=30%  Similarity=0.478  Sum_probs=21.1

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|++||+.|...+.|..|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~   23 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHIT   23 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CcccCCCCCchhCCHHHHHHHHH
Confidence            68999999999999999999863

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.51  E-value=1.8e-07  Score=38.54  Aligned_cols=26  Identities=27%  Similarity=0.484  Sum_probs=22.4

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      +||.|..|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47889999999999999999988774

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.20  E-value=4.5e-07  Score=38.06  Aligned_cols=23  Identities=26%  Similarity=0.369  Sum_probs=21.2

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|+.||+.|...+.|..|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHIL   23 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHT
T ss_pred             CCccCCCCCchhCCHHHHHHHHH
Confidence            58999999999999999999874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.19  E-value=7.1e-07  Score=36.80  Aligned_cols=26  Identities=23%  Similarity=0.508  Sum_probs=17.9

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46677777777777777777776653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.17  E-value=1.8e-07  Score=40.67  Aligned_cols=23  Identities=39%  Similarity=0.596  Sum_probs=21.2

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|++||+.|...+.|..|++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~   23 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIK   23 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTT
T ss_pred             CCCCCCCCCcccCCHHHHHHHHH
Confidence            58999999999999999999974

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.14  E-value=5.9e-07  Score=46.05  Aligned_cols=26  Identities=23%  Similarity=0.578  Sum_probs=23.6

Q ss_pred             hCC-CCcccccCccccCChHHHhcccC
Q psy11364         76 HQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        76 h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +.+ +||.|.+|+++|.+.+.|.+|++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r   34 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEA   34 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHH
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhh
Confidence            556 99999999999999999999974

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.13  E-value=6.2e-07  Score=37.53  Aligned_cols=22  Identities=18%  Similarity=0.585  Sum_probs=20.5

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +||.|+.|++.|...+.|..|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~   22 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHY   22 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHH
Confidence            5899999999999999999986

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.42  E-value=3.1e-07  Score=38.66  Aligned_cols=23  Identities=17%  Similarity=0.320  Sum_probs=21.1

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|..||+.|...+.|..|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVR   23 (29)
Confidence            58999999999999999999974

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.12  E-value=9e-07  Score=36.47  Aligned_cols=22  Identities=27%  Similarity=0.696  Sum_probs=19.6

Q ss_pred             CcccccCccccCChHHHhcccC
Q psy11364         80 FYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ||.|..||+.|...+.|..|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~   22 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQR   22 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGG
T ss_pred             CccCCCCCCcCCCHHHHHHHHH
Confidence            6899999999999999999874

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.11  E-value=1.6e-06  Score=36.21  Aligned_cols=27  Identities=22%  Similarity=0.623  Sum_probs=20.9

Q ss_pred             cceecc--cchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCF--VCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~--~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            357788  888888888888888877763

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=6.5e-07  Score=37.37  Aligned_cols=22  Identities=18%  Similarity=0.297  Sum_probs=20.5

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +||.|..|++.|...+.|..|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~   22 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHL   22 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHH
Confidence            5899999999999999999886

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.10  E-value=1.3e-06  Score=36.79  Aligned_cols=21  Identities=38%  Similarity=0.725  Sum_probs=16.7

Q ss_pred             CCcccccCccccCChHHHhcc
Q psy11364         79 AFYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H   99 (101)
                      +||.|..||+.|...+.|..|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHH
T ss_pred             CCcCCcccCcccCChHHHHHH
Confidence            477888888888888888777

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.09  E-value=6.6e-07  Score=40.14  Aligned_cols=26  Identities=19%  Similarity=0.466  Sum_probs=22.9

Q ss_pred             hCC-CCcccc--cCccccCChHHHhcccC
Q psy11364         76 HQN-AFYACS--SCSHVSRSRDALRKHDK  101 (101)
Q Consensus        76 h~~-kp~~C~--~C~k~f~~~~~l~~H~~  101 (101)
                      |++ +||.|.  .|++.|...+.|..|++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~   29 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKH   29 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHH
Confidence            567 999999  59999999999999863

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.08  E-value=1e-06  Score=37.15  Aligned_cols=27  Identities=19%  Similarity=0.344  Sum_probs=23.9

Q ss_pred             cceecccchhhcCCHHHHHHH-HHhhCC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVH-METHQN   78 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h-~~~h~~   78 (101)
                      ++|.|..|++.|.....|..| +++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            468999999999999999999 678875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.08  E-value=1.5e-06  Score=37.10  Aligned_cols=23  Identities=22%  Similarity=0.585  Sum_probs=21.0

Q ss_pred             CCcccc--cCccccCChHHHhcccC
Q psy11364         79 AFYACS--SCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~--~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|+  .||++|...+.|..|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~   25 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKR   25 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHH
Confidence            589998  99999999999999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=3.4e-07  Score=43.25  Aligned_cols=29  Identities=21%  Similarity=0.452  Sum_probs=25.7

Q ss_pred             HHhhCC-CCcccc--cCccccCChHHHhcccC
Q psy11364         73 METHQN-AFYACS--SCSHVSRSRDALRKHDK  101 (101)
Q Consensus        73 ~~~h~~-kp~~C~--~C~k~f~~~~~l~~H~~  101 (101)
                      .++|++ +||.|.  .|++.|...+.|..|++
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~   35 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRR   35 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHT
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHH
Confidence            356888 999998  89999999999999974

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.07  E-value=8.2e-07  Score=39.76  Aligned_cols=26  Identities=23%  Similarity=0.386  Sum_probs=23.0

Q ss_pred             hCC-CCcccc--cCccccCChHHHhcccC
Q psy11364         76 HQN-AFYACS--SCSHVSRSRDALRKHDK  101 (101)
Q Consensus        76 h~~-kp~~C~--~C~k~f~~~~~l~~H~~  101 (101)
                      |++ +||.|.  .||+.|...+.|..|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~   31 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLR   31 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHH
Confidence            567 999998  49999999999999863

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.07  E-value=1.5e-06  Score=45.00  Aligned_cols=25  Identities=20%  Similarity=0.244  Sum_probs=22.5

Q ss_pred             hCC-CCccccc--CccccCChHHHhccc
Q psy11364         76 HQN-AFYACSS--CSHVSRSRDALRKHD  100 (101)
Q Consensus        76 h~~-kp~~C~~--C~k~f~~~~~l~~H~  100 (101)
                      +++ |||.|..  |+++|.+.++|.+|+
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~   49 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHY   49 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHH
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHh
Confidence            567 9999975  999999999999996

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.06  E-value=9.9e-07  Score=37.08  Aligned_cols=22  Identities=27%  Similarity=0.538  Sum_probs=20.4

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +||.|..||+.|...+.|..|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~   22 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHI   22 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHH
Confidence            5899999999999999999886

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.30  E-value=6.1e-07  Score=37.87  Aligned_cols=23  Identities=26%  Similarity=0.533  Sum_probs=21.1

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|..||+.|...+.|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~   24 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVR   24 (30)
Confidence            58999999999999999999874

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.03  E-value=9.3e-07  Score=36.90  Aligned_cols=22  Identities=18%  Similarity=0.430  Sum_probs=20.5

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +||.|..|++.|.....|..|+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~   22 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHL   22 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHH
Confidence            5899999999999999999886

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=1e-06  Score=37.04  Aligned_cols=22  Identities=18%  Similarity=0.359  Sum_probs=20.6

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +||.|..||+.|.....|..|+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~   23 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHL   23 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH
T ss_pred             cCccCCCCCcccCCHHHHHHHH
Confidence            6899999999999999999886

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.97  E-value=2.4e-06  Score=40.32  Aligned_cols=29  Identities=31%  Similarity=0.667  Sum_probs=24.6

Q ss_pred             CCcceecc--cchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCF--VCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~--~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++++|.|.  .|++.|.....|..|+++|++
T Consensus        15 ~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           15 PDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             TTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             CCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            57889995  699999999999999988876

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=2.9e-06  Score=36.40  Aligned_cols=23  Identities=26%  Similarity=0.566  Sum_probs=21.0

Q ss_pred             CCcccc--cCccccCChHHHhcccC
Q psy11364         79 AFYACS--SCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~--~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|.  .||+.|...+.|..|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~   26 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHH
Confidence            689999  89999999999999874

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.92  E-value=2.8e-06  Score=40.19  Aligned_cols=26  Identities=23%  Similarity=0.419  Sum_probs=23.4

Q ss_pred             hCC-CCcccccCccccCChHHHhcccC
Q psy11364         76 HQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        76 h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |.+ +||.|.+|++.|.....|..|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKL   33 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGG
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHH
Confidence            556 89999999999999999999974

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.89  E-value=3.5e-07  Score=43.34  Aligned_cols=30  Identities=17%  Similarity=0.397  Sum_probs=25.3

Q ss_pred             HHHhhCC-CCcccc--cCccccCChHHHhcccC
Q psy11364         72 HMETHQN-AFYACS--SCSHVSRSRDALRKHDK  101 (101)
Q Consensus        72 h~~~h~~-kp~~C~--~C~k~f~~~~~l~~H~~  101 (101)
                      |...|++ +||.|+  .||+.|...+.|..|++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~   41 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHH
Confidence            3446888 999996  79999999999999863

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.88  E-value=2.7e-06  Score=35.44  Aligned_cols=23  Identities=30%  Similarity=0.720  Sum_probs=20.9

Q ss_pred             CCcccc--cCccccCChHHHhcccC
Q psy11364         79 AFYACS--SCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~--~C~k~f~~~~~l~~H~~  101 (101)
                      +||.|.  .|++.|...+.|..|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~   25 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKK   25 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHH
Confidence            589999  99999999999999874

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.79  E-value=4.2e-07  Score=45.69  Aligned_cols=28  Identities=21%  Similarity=0.363  Sum_probs=24.0

Q ss_pred             HHHHHhhCC-CCcccccCccccCChHHHh
Q psy11364         70 RVHMETHQN-AFYACSSCSHVSRSRDALR   97 (101)
Q Consensus        70 ~~h~~~h~~-kp~~C~~C~k~f~~~~~l~   97 (101)
                      ..|+++|++ +||.|+.||+.|...+.|.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~   31 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ   31 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH
Confidence            356778999 9999999999999888774

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.76  E-value=1.9e-06  Score=46.51  Aligned_cols=28  Identities=21%  Similarity=0.415  Sum_probs=25.1

Q ss_pred             HhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         74 ETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        74 ~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++|++ +||.|+.|++.|...+.|..|++
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~   46 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLN   46 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHH
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHH
Confidence            46888 99999999999999999999863

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.45  E-value=0.00011  Score=37.15  Aligned_cols=45  Identities=20%  Similarity=0.470  Sum_probs=38.5

Q ss_pred             ccchhhcCCHHHHHHHH-HhhCC-C------Ccccc--cCccccCChHHHhcccC
Q psy11364         57 FVCGKQLSNQYNLRVHM-ETHQN-A------FYACS--SCSHVSRSRDALRKHDK  101 (101)
Q Consensus        57 ~~c~~~~~~~~~l~~h~-~~h~~-k------p~~C~--~C~k~f~~~~~l~~H~~  101 (101)
                      ..|++.|.....|..|+ ..|.+ +      +|.|.  .|+..+.....|..|++
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            46999999999999998 47876 6      79996  79999888899999874

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.42  E-value=3.5e-05  Score=44.04  Aligned_cols=26  Identities=15%  Similarity=0.340  Sum_probs=16.8

Q ss_pred             hCC-CCcccccCccccCChHHHhcccC
Q psy11364         76 HQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        76 h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+| +||.|..|++.|.+.+.|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            455 66666666666666666666653

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.50  E-value=0.0001  Score=38.32  Aligned_cols=31  Identities=23%  Similarity=0.304  Sum_probs=26.0

Q ss_pred             HHHHHHhhCC-CCcccccCccccCChHHHhccc
Q psy11364         69 LRVHMETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        69 l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |..|++.+.+ +|+.|..|++.|. ...|..|+
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~   36 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE   36 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH
Confidence            4567777888 9999999999995 88888874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.46  E-value=0.0034  Score=35.88  Aligned_cols=49  Identities=20%  Similarity=0.289  Sum_probs=38.8

Q ss_pred             cceecccchhhcCCHHHHHHHH--Hhh-------------------------------CC-CCcccccCccccCChHHHh
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHM--ETH-------------------------------QN-AFYACSSCSHVSRSRDALR   97 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~--~~h-------------------------------~~-kp~~C~~C~k~f~~~~~l~   97 (101)
                      +++.|..|...|.....+..|.  +.|                               .+ ..|-|.+|++.|.....+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            5578888888888888887777  223                               23 4678999999999999998


Q ss_pred             ccc
Q psy11364         98 KHD  100 (101)
Q Consensus        98 ~H~  100 (101)
                      .|.
T Consensus       111 ~H~  113 (127)
T 1zu1_A          111 SHY  113 (127)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            886

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.45  E-value=0.00078  Score=31.77  Aligned_cols=23  Identities=30%  Similarity=0.300  Sum_probs=20.4

Q ss_pred             cceecccchhhcCCHHHHHHHHH
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHME   74 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~   74 (101)
                      -++.|+.|+..|.....|+.||.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45889999999999999999985

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.50  E-value=0.0031  Score=35.95  Aligned_cols=26  Identities=19%  Similarity=0.554  Sum_probs=23.9

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHh
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMET   75 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~   75 (101)
                      ++++|.|..|++.|.....|..|++.
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCcceEcccCcchhCCHHHHHHHHhh
Confidence            57899999999999999999999864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.50  E-value=0.0097  Score=28.04  Aligned_cols=21  Identities=33%  Similarity=0.517  Sum_probs=15.1

Q ss_pred             cccccCccccCChHHHhcccC
Q psy11364         81 YACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |.|+.|+..|.....|..||+
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            567777777777777777763

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=93.18  E-value=0.043  Score=28.68  Aligned_cols=45  Identities=24%  Similarity=0.584  Sum_probs=32.9

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcc
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H   99 (101)
                      .|.|..|+..+..+ .+..|...-.+ ..|.|..|++.|.. .....|
T Consensus        10 ~F~C~~Cgd~lKK~-kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           10 FFTCNACGESVKKI-QVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEEESSSCCEEETT-HHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEEcCCCCCeeecc-cchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            47899999776554 47888766666 67999999999974 344444

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.85  E-value=0.059  Score=23.59  Aligned_cols=19  Identities=37%  Similarity=0.690  Sum_probs=10.8

Q ss_pred             cccccCccccCChHHHhcc
Q psy11364         81 YACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H   99 (101)
                      |.|+.|.+.|.....|..|
T Consensus         6 FiCP~C~~~l~s~~~L~~H   24 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKH   24 (34)
T ss_dssp             EECTTTCCEESSHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHH
Confidence            5556665555555555544

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=86.90  E-value=0.28  Score=27.00  Aligned_cols=11  Identities=36%  Similarity=0.621  Sum_probs=5.7

Q ss_pred             ceecccchhhc
Q psy11364         53 FATCFVCGKQL   63 (101)
Q Consensus        53 ~~~C~~c~~~~   63 (101)
                      ++.|..||..|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            44555555554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=81.10  E-value=0.81  Score=26.86  Aligned_cols=38  Identities=13%  Similarity=0.515  Sum_probs=21.5

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSR   91 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~   91 (101)
                      +..|+.|+..+ ....+..|....-. ++..|..|+..+.
T Consensus       110 ~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~  148 (170)
T 3hcs_A          110 LMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA  148 (170)
T ss_dssp             EEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE
T ss_pred             eeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC
Confidence            44566666555 34446666654444 5666777766554

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=80.39  E-value=0.66  Score=20.82  Aligned_cols=26  Identities=23%  Similarity=0.403  Sum_probs=19.3

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      ...+.|..|++.+... ....|...|.
T Consensus         7 ~~~~~C~~C~~~i~~~-~~~EH~D~H~   32 (39)
T 2i5o_A            7 EDQVPCEKCGSLVPVW-DMPEHMDYHF   32 (39)
T ss_dssp             CCEEECTTTCCEEEGG-GHHHHHHHHH
T ss_pred             CCCcccccccCcCCcc-cccchhhHHH
Confidence            4457899999888764 4578887775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	101
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.74
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.39
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.24
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.22
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.2
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.16
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.15
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.12
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.1
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.09
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.07
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.06
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.06
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.04
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.04
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.03
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.02
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.99
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.97
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.93
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.83
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.8
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.78
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.74
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.71
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.65
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.63
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.58
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.55
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.55
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.54
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.49
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.47
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.46
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.45
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.42
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.42
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.42
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.35
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.32
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.28
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.22
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.2
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.17
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.11
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.88
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.67
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.66
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.6
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.53
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.43
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.39
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.37
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.34
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.34
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.3
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.3
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.27
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.26
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.19
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.16
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.1
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.05
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.0
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.91
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.89
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.6
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.57
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.57
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.53
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.49
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.49
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.47
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.46
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.38
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.32
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.29
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.26
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.16
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.0
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.96
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.88
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.58
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.38
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.14
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.11
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.97
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.55
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.28
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.23
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.72
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.45
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.16
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.03
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.02
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.09
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	87.97
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.34
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	86.13
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.47
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	83.36
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	81.42
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	81.39
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	81.04

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=6.5e-19  Score=86.64  Aligned_cols=50  Identities=26%  Similarity=0.524  Sum_probs=47.9

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++||.| .||+.|.....|..|+++|++ +||.|.+||++|...+.|..|++
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            579999 599999999999999999999 99999999999999999999985

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.2e-13  Score=62.83  Aligned_cols=36  Identities=25%  Similarity=0.385  Sum_probs=33.0

Q ss_pred             CCcceecccchhhcCCHHHHHHHHH-hhCC-CCccccc
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHME-THQN-AFYACSS   85 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~-~h~~-kp~~C~~   85 (101)
                      .++||.|..||+.|....+|.+|++ +|++ |||.|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3789999999999999999999976 7999 9999974

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=3.1e-13  Score=60.98  Aligned_cols=27  Identities=19%  Similarity=0.393  Sum_probs=13.7

Q ss_pred             HhhCC-CCcccccCccccCChHHHhccc
Q psy11364         74 ETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        74 ~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ++|++ |||.|.+|+++|.+.++|.+|+
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~   31 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHR   31 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHH
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHH
Confidence            44555 5555555555555555555443

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.3e-14  Score=69.95  Aligned_cols=52  Identities=25%  Similarity=0.207  Sum_probs=47.5

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCCCCCCCCcceecccchhhcCCHHHHHHHHHhh
Q psy11364         23 SPLSSSIPGSSKTKASGSGTTGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETH   76 (101)
Q Consensus        23 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h   76 (101)
                      .||.| .||+.|...+.+..|.+++. +++||.|..|++.|.....|..|+++|
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht-~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHL-GLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHS-CCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccc-cccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            37899 59999999999999988876 589999999999999999999999876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.7e-13  Score=60.76  Aligned_cols=35  Identities=26%  Similarity=0.392  Sum_probs=23.6

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      |..++. +++||.|..||+.|...++|..|+++|+|
T Consensus         3 H~~~Ht-~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQR-ERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCC-CSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccC-CCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            344444 46777777777777777777777777764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=7.4e-12  Score=52.73  Aligned_cols=28  Identities=25%  Similarity=0.486  Sum_probs=25.1

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      |+||.|..|++.|...++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5789999999999999999999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=2.2e-12  Score=57.73  Aligned_cols=29  Identities=17%  Similarity=0.346  Sum_probs=23.1

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +++||.|..|++.|...+.|..|+++|.+
T Consensus         5 gekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           5 GEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            57788888888888888888888887765

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=4.5e-12  Score=55.45  Aligned_cols=29  Identities=28%  Similarity=0.409  Sum_probs=23.3

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +++||.|..|++.|...+.|..|+++|+|
T Consensus         4 gekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           4 GEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            57788888888888888888888888875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=3.7e-12  Score=56.94  Aligned_cols=25  Identities=12%  Similarity=0.507  Sum_probs=14.7

Q ss_pred             CCcceecccchhhcCCHHHHHHHHH
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHME   74 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~   74 (101)
                      +++||.|..|++.|....+|..|++
T Consensus         5 gekP~~C~~C~k~F~~~~~L~~H~~   29 (36)
T d2ct1a2           5 GEKPYECYICHARFTQSGTMKMHIL   29 (36)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             CCCCEeCCCCcccccchHHHHHHcc
Confidence            3556666666666666666666643

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.09  E-value=3.2e-11  Score=51.26  Aligned_cols=27  Identities=30%  Similarity=0.536  Sum_probs=25.1

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +||.|..|++.|...+.|.+|+++|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC
Confidence            589999999999999999999999997

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=1.4e-11  Score=54.51  Aligned_cols=26  Identities=15%  Similarity=0.340  Sum_probs=18.6

Q ss_pred             hCC-CCcccccCccccCChHHHhcccC
Q psy11364         76 HQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        76 h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+| |||.|++|+++|.+.++|.+|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r   28 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLK   28 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcc
Confidence            456 77777777777777777777764

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=8e-11  Score=53.14  Aligned_cols=31  Identities=19%  Similarity=0.373  Sum_probs=28.7

Q ss_pred             HHHHhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         71 VHMETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        71 ~h~~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|+++|++ |||.|++|||+|.+.++|.+|++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r   33 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRR   33 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHT
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCc
Confidence            46788999 99999999999999999999975

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.7e-11  Score=49.45  Aligned_cols=26  Identities=31%  Similarity=0.501  Sum_probs=18.4

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      +||+|.+|||.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46777777777777777777777664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=1.5e-11  Score=50.66  Aligned_cols=23  Identities=22%  Similarity=0.521  Sum_probs=21.8

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |||+|.+|||+|.+.++|.+|+|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqr   23 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQR   23 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCcc
Confidence            79999999999999999999975

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.7e-11  Score=52.89  Aligned_cols=31  Identities=32%  Similarity=0.687  Sum_probs=28.6

Q ss_pred             eeccc--chhhcCCHHHHHHHHHhhCC-CCcccc
Q psy11364         54 ATCFV--CGKQLSNQYNLRVHMETHQN-AFYACS   84 (101)
Q Consensus        54 ~~C~~--c~~~~~~~~~l~~h~~~h~~-kp~~C~   84 (101)
                      |.|..  |+++|.....|.+|+++|++ +||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67764  99999999999999999999 999996

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=6.4e-11  Score=50.22  Aligned_cols=27  Identities=33%  Similarity=0.490  Sum_probs=24.2

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +||.|..|++.|...+.|.+|+++|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            578999999999999999999999987

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=1.2e-10  Score=50.78  Aligned_cols=27  Identities=22%  Similarity=0.529  Sum_probs=25.3

Q ss_pred             hhCC-CCcccccCccccCChHHHhcccC
Q psy11364         75 THQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        75 ~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +|++ |||.|.+||++|.+.++|..|++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r   28 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQR   28 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcc
Confidence            5899 99999999999999999999974

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=1.5e-10  Score=51.12  Aligned_cols=29  Identities=21%  Similarity=0.402  Sum_probs=27.8

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +++||.|..|++.|....+|..|+++|++
T Consensus         4 GekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           4 GKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCccccCCCCCCcccChHHHHHHccccCC
Confidence            69999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=3.9e-10  Score=50.21  Aligned_cols=28  Identities=39%  Similarity=0.630  Sum_probs=26.1

Q ss_pred             HhhCC-CCcccccCccccCChHHHhcccC
Q psy11364         74 ETHQN-AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        74 ~~h~~-kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      ++|+| |||.|.+||++|.+.++|..|++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r   29 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFK   29 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCc
Confidence            47999 99999999999999999999974

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=4.9e-10  Score=50.19  Aligned_cols=35  Identities=20%  Similarity=0.263  Sum_probs=30.4

Q ss_pred             CCCCCCCCCcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         43 TGGSSNHSKLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        43 ~~~~~~~~~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      |.+++. +++||.|..|++.|.....|..|+++|.+
T Consensus         2 h~R~HT-geKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGST-GIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTC-CSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccC-CccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            445555 69999999999999999999999999863

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=1.1e-10  Score=49.05  Aligned_cols=23  Identities=22%  Similarity=0.407  Sum_probs=21.8

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |||.|.+|+++|.++++|.+|++
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r   24 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIR   24 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHH
T ss_pred             cCccCCCCcCEecccccccccCC
Confidence            79999999999999999999975

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=3.5e-10  Score=47.88  Aligned_cols=23  Identities=35%  Similarity=0.549  Sum_probs=21.6

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |||.|.+||++|.++++|.+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r   23 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIK   23 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHH
T ss_pred             CCEECCcCCCeecchHHhhhhcC
Confidence            69999999999999999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.80  E-value=5.2e-10  Score=47.37  Aligned_cols=23  Identities=17%  Similarity=0.599  Sum_probs=21.6

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |||.|++||++|.+.+.|.+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r   23 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH
T ss_pred             CcCCCCCCCCCCCCchHcccccC
Confidence            69999999999999999999974

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=2.1e-09  Score=45.69  Aligned_cols=27  Identities=30%  Similarity=0.525  Sum_probs=23.4

Q ss_pred             cceeccc--chhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFV--CGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~--c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +||.|..  |++.|...+.|++|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            5788876  99999999999999999885

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2.5e-09  Score=45.50  Aligned_cols=27  Identities=37%  Similarity=0.710  Sum_probs=23.4

Q ss_pred             cceeccc--chhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFV--CGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~--c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +||.|..  |++.|...+.|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            5788965  99999999999999999875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.5e-09  Score=45.37  Aligned_cols=27  Identities=30%  Similarity=0.514  Sum_probs=23.4

Q ss_pred             cceecc--cchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCF--VCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~--~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +||.|+  .|++.|...++|.+|+++|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            578884  699999999999999999987

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.65  E-value=5e-09  Score=44.13  Aligned_cols=27  Identities=26%  Similarity=0.501  Sum_probs=21.8

Q ss_pred             cceeccc--chhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCFV--CGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~~--c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +||.|..  |++.|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788865  88888888888888888875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1.9e-08  Score=44.52  Aligned_cols=27  Identities=22%  Similarity=0.413  Sum_probs=25.3

Q ss_pred             HhhCC-CCcccccCccccCChHHHhccc
Q psy11364         74 ETHQN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        74 ~~h~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ++|+| |||.|+.|+++|.+.++|.+|+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~   28 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHI   28 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHH
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHc
Confidence            47999 9999999999999999999996

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.58  E-value=7.5e-09  Score=48.52  Aligned_cols=30  Identities=30%  Similarity=0.668  Sum_probs=26.7

Q ss_pred             CCCcceeccc--chhhcCCHHHHHHHHHhhCC
Q psy11364         49 HSKLFATCFV--CGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        49 ~~~~~~~C~~--c~~~~~~~~~l~~h~~~h~~   78 (101)
                      .+++||.|..  |++.|...++|..|+++|++
T Consensus        14 ~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             ETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             cCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            4689999976  99999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=5.7e-09  Score=46.99  Aligned_cols=22  Identities=32%  Similarity=0.472  Sum_probs=21.3

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |||.|++||++|.+.++|.+|+
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~   25 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHI   25 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH
T ss_pred             CCccCCCCCCCcCChHHhhccC
Confidence            8999999999999999999996

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.55  E-value=1.8e-08  Score=43.32  Aligned_cols=28  Identities=25%  Similarity=0.381  Sum_probs=23.2

Q ss_pred             Ccceeccc--chhhcCCHHHHHHHHHhhCC
Q psy11364         51 KLFATCFV--CGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        51 ~~~~~C~~--c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++||.|..  |++.|...++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            47888866  88889888889888888874

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=7.9e-09  Score=43.85  Aligned_cols=23  Identities=17%  Similarity=0.345  Sum_probs=21.3

Q ss_pred             CCccccc--CccccCChHHHhcccC
Q psy11364         79 AFYACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      |||.|+.  ||++|.+.++|.+|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLR   25 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             CCeeCCCCCCCceECChhHhhhhcC
Confidence            6999988  9999999999999974

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=1.4e-08  Score=42.27  Aligned_cols=26  Identities=31%  Similarity=0.537  Sum_probs=16.2

Q ss_pred             cceeccc--chhhcCCHHHHHHHHHhhC
Q psy11364         52 LFATCFV--CGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        52 ~~~~C~~--c~~~~~~~~~l~~h~~~h~   77 (101)
                      +||.|..  |++.|...++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3566644  6666666666666666664

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=9e-09  Score=42.91  Aligned_cols=23  Identities=22%  Similarity=0.394  Sum_probs=21.1

Q ss_pred             CCccccc--CccccCChHHHhcccC
Q psy11364         79 AFYACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      |||.|+.  |||+|.+.++|.+|++
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r   25 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHIL   25 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHh
Confidence            6999987  9999999999999974

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=1.4e-08  Score=43.13  Aligned_cols=23  Identities=22%  Similarity=0.375  Sum_probs=21.2

Q ss_pred             CCccccc--CccccCChHHHhcccC
Q psy11364         79 AFYACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      |||.|+.  ||++|.+.++|.+|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVR   25 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCcccc
Confidence            6999977  9999999999999975

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.45  E-value=1.1e-09  Score=51.43  Aligned_cols=32  Identities=16%  Similarity=0.356  Sum_probs=27.3

Q ss_pred             HHHHHHhhCC-CCccccc--CccccCChHHHhcccC
Q psy11364         69 LRVHMETHQN-AFYACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        69 l~~h~~~h~~-kp~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      +..|+ .|++ +||.|+.  |+++|.+.++|..|++
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r   41 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcc
Confidence            45566 4889 9999987  9999999999999974

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=5.3e-08  Score=38.25  Aligned_cols=26  Identities=38%  Similarity=0.676  Sum_probs=19.6

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      |++|..|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46677788888888888888777764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.42  E-value=3.5e-08  Score=42.41  Aligned_cols=23  Identities=26%  Similarity=0.557  Sum_probs=21.3

Q ss_pred             CCccccc--CccccCChHHHhcccC
Q psy11364         79 AFYACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      +||.|..  ||++|.+.++|.+|++
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r   26 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhh
Confidence            7999987  9999999999999975

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.42  E-value=2.2e-08  Score=42.06  Aligned_cols=23  Identities=26%  Similarity=0.504  Sum_probs=21.1

Q ss_pred             CCccccc--CccccCChHHHhcccC
Q psy11364         79 AFYACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      |||.|.+  |+++|.+.++|.+|++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r   25 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIR   25 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcC
Confidence            6999977  9999999999999974

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=8.4e-08  Score=40.91  Aligned_cols=23  Identities=22%  Similarity=0.585  Sum_probs=20.9

Q ss_pred             CCcccc--cCccccCChHHHhcccC
Q psy11364         79 AFYACS--SCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~--~C~k~f~~~~~l~~H~~  101 (101)
                      |||.|+  .||++|.+.++|.+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r   25 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKR   25 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcC
Confidence            699995  69999999999999985

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=1.9e-07  Score=37.75  Aligned_cols=27  Identities=19%  Similarity=0.453  Sum_probs=18.6

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      ++||.|..||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            456777777777777777777776664

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.28  E-value=8.8e-08  Score=38.75  Aligned_cols=23  Identities=26%  Similarity=0.546  Sum_probs=20.8

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |||.|++||+.|.++....+|.+
T Consensus         2 kPf~C~~CgrkFArsderkRH~k   24 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTK   24 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHG
T ss_pred             CCcccchhhhhhhcchhhhhhhh
Confidence            79999999999999999988853

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=2.2e-07  Score=36.45  Aligned_cols=22  Identities=23%  Similarity=0.502  Sum_probs=20.4

Q ss_pred             CcccccCccccCChHHHhcccC
Q psy11364         80 FYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |.+|+.|+|.|++++.|..|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr   22 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMR   22 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGG
T ss_pred             CCccchhhhHhcchhHHHHHhh
Confidence            6789999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=4.3e-07  Score=38.07  Aligned_cols=32  Identities=28%  Similarity=0.596  Sum_probs=28.7

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC-CCcc
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN-AFYA   82 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~   82 (101)
                      ++...|..||++|..-..|.+|.-.|++ |||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            4557899999999999999999999999 9983

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=3e-07  Score=40.66  Aligned_cols=24  Identities=25%  Similarity=0.513  Sum_probs=18.4

Q ss_pred             CC-CCcccccCccccCChHHHhccc
Q psy11364         77 QN-AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        77 ~~-kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +| |||.|..|+|.|-+.+++.+|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhh
Confidence            36 7888888888888888777663

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=7e-07  Score=35.63  Aligned_cols=26  Identities=27%  Similarity=0.539  Sum_probs=22.5

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      .+.|.+||++|...+.|++|+-+|++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccC
Confidence            36789999999999999999888875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=6.2e-06  Score=33.70  Aligned_cols=28  Identities=21%  Similarity=0.511  Sum_probs=23.6

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++||.|+.|+..|..+....-|.+.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4688888888888888888888888876

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=4.6e-06  Score=33.37  Aligned_cols=28  Identities=25%  Similarity=0.446  Sum_probs=23.2

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      ++||+|..|.......+.|..|.+.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4688888888888888888888888875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=4.3e-06  Score=34.16  Aligned_cols=22  Identities=23%  Similarity=0.511  Sum_probs=19.9

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |||.|++|+..|.+++.+..|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhv   23 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHV   23 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHH
T ss_pred             CCcccchHHHHhhccccceEee
Confidence            7999999999999999887774

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.66  E-value=7.1e-06  Score=33.76  Aligned_cols=21  Identities=33%  Similarity=0.670  Sum_probs=16.9

Q ss_pred             CcccccCccccCChHHHhccc
Q psy11364         80 FYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ||.|.+|++.|.+.+-|.+|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHH
T ss_pred             CcccccccchhhHHHHHHHHH
Confidence            678888888888888887775

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=3.2e-05  Score=30.98  Aligned_cols=25  Identities=28%  Similarity=0.539  Sum_probs=23.5

Q ss_pred             eecccchhhcCCHHHHHHHHHhhCC
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      |.|..|+.....++.|+.|.+.|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            7899999999999999999999986

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=4.4e-05  Score=30.17  Aligned_cols=26  Identities=19%  Similarity=0.363  Sum_probs=22.7

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      +||+|..|..+-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57899999998889999999998885

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=1.4e-05  Score=32.53  Aligned_cols=22  Identities=32%  Similarity=0.590  Sum_probs=12.1

Q ss_pred             CCccccc--CccccCChHHHhccc
Q psy11364         79 AFYACSS--CSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~--C~k~f~~~~~l~~H~  100 (101)
                      |||.|..  |+|++...++|.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~   24 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHV   24 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHH
Confidence            3555544  555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=3e-05  Score=30.76  Aligned_cols=21  Identities=19%  Similarity=0.556  Sum_probs=18.6

Q ss_pred             CcccccCccccCChHHHhccc
Q psy11364         80 FYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H~  100 (101)
                      -..|.+|||+|..++.|.+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~   22 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQ   22 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHG
T ss_pred             cchHHHHhHHHHHHHHHHHHh
Confidence            357999999999999999985

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=1.7e-05  Score=31.80  Aligned_cols=21  Identities=29%  Similarity=0.627  Sum_probs=13.0

Q ss_pred             CcccccCccccCChHHHhccc
Q psy11364         80 FYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ||.|..|.-+|..+.+|..||
T Consensus         1 py~C~~CnF~FKTKGNLTKHm   21 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHM   21 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhh
Confidence            556666666666666666654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.34  E-value=4.2e-05  Score=29.46  Aligned_cols=21  Identities=29%  Similarity=0.724  Sum_probs=16.6

Q ss_pred             cccccCccccCChHHHhcccC
Q psy11364         81 YACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |+|..|.++|..++.|.+|++
T Consensus         1 ykcglcersfveksalsrhqr   21 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQR   21 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG
T ss_pred             CcccchHHHHHHHHHHHHHHH
Confidence            578888888888888888764

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.34  E-value=0.0001  Score=32.01  Aligned_cols=28  Identities=25%  Similarity=0.447  Sum_probs=25.3

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      .+.|.|..|++.|.....|-.|++.|..
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcc
Confidence            4569999999999999999999999875

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.30  E-value=0.00012  Score=28.55  Aligned_cols=24  Identities=33%  Similarity=0.721  Sum_probs=22.1

Q ss_pred             ecccchhhcCCHHHHHHHHHhhCC
Q psy11364         55 TCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        55 ~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      .|+.|.+.|..+..|+.|-+.|+|
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             cCcchHHHHHHhHhhhhccccccC
Confidence            589999999999999999999987

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.30  E-value=5.7e-05  Score=29.07  Aligned_cols=24  Identities=21%  Similarity=0.494  Sum_probs=21.8

Q ss_pred             eecccchhhcCCHHHHHHHHHhhC
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      |+|..|.+.|..++.|.+|+++|-
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            579999999999999999999884

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=2.3e-05  Score=34.15  Aligned_cols=21  Identities=24%  Similarity=0.651  Sum_probs=18.6

Q ss_pred             ccccc--CccccCChHHHhcccC
Q psy11364         81 YACSS--CSHVSRSRDALRKHDK  101 (101)
Q Consensus        81 ~~C~~--C~k~f~~~~~l~~H~~  101 (101)
                      |.|+.  ||++|.+.+.|.+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r   24 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK   24 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH
T ss_pred             eECCCCCCCCeeCChhHhccccC
Confidence            67876  9999999999999974

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.00014  Score=29.48  Aligned_cols=26  Identities=27%  Similarity=0.410  Sum_probs=22.0

Q ss_pred             cceecc--cchhhcCCHHHHHHHHHhhC
Q psy11364         52 LFATCF--VCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        52 ~~~~C~--~c~~~~~~~~~l~~h~~~h~   77 (101)
                      +||.|.  .|++.+..++.|..|++.+.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            578886  49999999999999998643

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.19  E-value=0.00015  Score=28.88  Aligned_cols=26  Identities=31%  Similarity=0.433  Sum_probs=21.3

Q ss_pred             cceecc--cchhhcCCHHHHHHHHHhhC
Q psy11364         52 LFATCF--VCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        52 ~~~~C~--~c~~~~~~~~~l~~h~~~h~   77 (101)
                      .||.|+  .|++.|..++.|++|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            367784  68899999999999988873

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=7.7e-05  Score=29.69  Aligned_cols=23  Identities=26%  Similarity=0.504  Sum_probs=21.0

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||+|..|..+-..++.|..|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr   24 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLR   24 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHT
T ss_pred             CcceeeecccccCCchheEEeee
Confidence            69999999999999999998875

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=0.00012  Score=28.85  Aligned_cols=20  Identities=20%  Similarity=0.577  Sum_probs=15.2

Q ss_pred             CcccccCccccCChHHHhcc
Q psy11364         80 FYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H   99 (101)
                      ||.|..|||.+-++.+|..|
T Consensus         1 pf~c~kcgkcyfrkenlleh   20 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEH   20 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHH
Confidence            67788888877777777766

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.05  E-value=0.00041  Score=27.64  Aligned_cols=28  Identities=32%  Similarity=0.653  Sum_probs=25.0

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +..|.|..|...|..+-.|..||-.|+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            4568999999999999999999999885

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=8e-05  Score=29.40  Aligned_cols=23  Identities=26%  Similarity=0.592  Sum_probs=20.9

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |||+|..|+.+-.-.++|..|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~r   24 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLR   24 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccccccchhcchhhHhhhhh
Confidence            79999999999999999999874

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.91  E-value=0.00015  Score=27.81  Aligned_cols=21  Identities=38%  Similarity=0.637  Sum_probs=13.1

Q ss_pred             CcccccCccccCChHHHhccc
Q psy11364         80 FYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H~  100 (101)
                      ||+|..|...|-++..|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666666554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00039  Score=30.42  Aligned_cols=26  Identities=15%  Similarity=0.316  Sum_probs=22.9

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHh
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMET   75 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~   75 (101)
                      +-+||.|..|+|.|-.+..+.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            35899999999999999999999753

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.60  E-value=0.00022  Score=28.41  Aligned_cols=22  Identities=23%  Similarity=0.572  Sum_probs=19.0

Q ss_pred             CCcccc--cCccccCChHHHhccc
Q psy11364         79 AFYACS--SCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~--~C~k~f~~~~~l~~H~  100 (101)
                      .||+|+  -|++.|...+-|.+|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhe   25 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHE   25 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhh
Confidence            389995  4999999999999985

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.001  Score=26.49  Aligned_cols=25  Identities=24%  Similarity=0.402  Sum_probs=22.3

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      ||.|..|.-.|..+.+|..||...+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            6899999999999999999998543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.57  E-value=0.00065  Score=27.71  Aligned_cols=26  Identities=19%  Similarity=0.369  Sum_probs=22.2

Q ss_pred             ceecccchhhcCCHHHHHHHHH-hhCC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHME-THQN   78 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~-~h~~   78 (101)
                      ||.|..|++.|..+.-|.+|+. +|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            6899999999999999999975 4543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0011  Score=28.49  Aligned_cols=27  Identities=30%  Similarity=0.538  Sum_probs=23.6

Q ss_pred             Ccceec--ccchhhcCCHHHHHHHHHhhC
Q psy11364         51 KLFATC--FVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        51 ~~~~~C--~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      ++||.|  +.|+..|.....|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            789999  689999999999999987764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00022  Score=29.19  Aligned_cols=22  Identities=27%  Similarity=0.510  Sum_probs=16.3

Q ss_pred             CCccccc--CccccCChHHHhccc
Q psy11364         79 AFYACSS--CSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~--C~k~f~~~~~l~~H~  100 (101)
                      |||.|..  |.|+|+..+....|+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhc
Confidence            5788865  888888877766664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00042  Score=27.77  Aligned_cols=21  Identities=24%  Similarity=0.490  Sum_probs=10.7

Q ss_pred             ceecccchhhcCCHHHHHHHH
Q psy11364         53 FATCFVCGKQLSNQYNLRVHM   73 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~   73 (101)
                      ||.|..|.......++|+.|.
T Consensus         2 py~cqyc~yrsadssnlkthi   22 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHI   22 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHH
T ss_pred             Cccccccccccccchhhhhhh
Confidence            455555555555555555443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.47  E-value=0.001  Score=25.40  Aligned_cols=22  Identities=27%  Similarity=0.499  Sum_probs=20.3

Q ss_pred             ceecccchhhcCCHHHHHHHHH
Q psy11364         53 FATCFVCGKQLSNQYNLRVHME   74 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~   74 (101)
                      ||+|..|...|-++..|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999975

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0013  Score=26.31  Aligned_cols=22  Identities=27%  Similarity=0.538  Sum_probs=18.9

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |||.|..|.....-+++|..|+
T Consensus         1 kpy~cqyc~yrsadssnlkthi   22 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHI   22 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHH
T ss_pred             CCccccccccccccchhhhhhh
Confidence            6899999998888888988775

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00055  Score=28.35  Aligned_cols=22  Identities=27%  Similarity=0.517  Sum_probs=19.3

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +...|+.|||+|.---.|.+|.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhk   25 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHK   25 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHG
T ss_pred             hhhhHHHHHHHHHHHHHHHhhh
Confidence            5678999999999999998884

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.32  E-value=0.0016  Score=25.43  Aligned_cols=22  Identities=32%  Similarity=0.345  Sum_probs=19.8

Q ss_pred             ceecccchhhcCCHHHHHHHHH
Q psy11364         53 FATCFVCGKQLSNQYNLRVHME   74 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~   74 (101)
                      ||.|..||+-+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999999865

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.29  E-value=0.0011  Score=26.40  Aligned_cols=27  Identities=26%  Similarity=0.298  Sum_probs=21.1

Q ss_pred             cceecc--cchhhcCCHHHHHHHHHhhCC
Q psy11364         52 LFATCF--VCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        52 ~~~~C~--~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      +||.|.  .|.|.|..-..|.+|...|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            467774  688889888888888877764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0019  Score=25.72  Aligned_cols=24  Identities=25%  Similarity=0.328  Sum_probs=19.2

Q ss_pred             cceecccchhhcCCHHHHHHHHHh
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMET   75 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~   75 (101)
                      +||+|..|.-.-.++++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            578888888888888888888763

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.00063  Score=27.17  Aligned_cols=23  Identities=30%  Similarity=0.557  Sum_probs=20.2

Q ss_pred             CCcccccCccccCChHHHhcccC
Q psy11364         79 AFYACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      +||+|..|.-.-.+.++|..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHH
Confidence            59999999988889999998863

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.00  E-value=0.00079  Score=29.07  Aligned_cols=22  Identities=41%  Similarity=0.575  Sum_probs=19.4

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      +.|.|..|++.|.....|--|+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~   25 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHM   25 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHH
T ss_pred             CccCCCCCCCccCCcccccchH
Confidence            6799999999999999887665

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0012  Score=27.52  Aligned_cols=20  Identities=25%  Similarity=0.740  Sum_probs=13.4

Q ss_pred             CcccccCccccCChHHHhcc
Q psy11364         80 FYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H   99 (101)
                      .|.|..|||.|.+...+.+|
T Consensus         4 afvcskcgktftrrntm~rh   23 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARH   23 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHH
T ss_pred             eeeecccccchhcchHHHHH
Confidence            36677777777777666655

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.88  E-value=0.003  Score=28.48  Aligned_cols=26  Identities=31%  Similarity=0.565  Sum_probs=23.3

Q ss_pred             cceecccchhhcCCHHHHHHHHHhhC
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      -.+.|..|+|.|.....|+.|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35889999999999999999998886

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.0014  Score=28.11  Aligned_cols=22  Identities=23%  Similarity=0.508  Sum_probs=19.7

Q ss_pred             CCccc--ccCccccCChHHHhccc
Q psy11364         79 AFYAC--SSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C--~~C~k~f~~~~~l~~H~  100 (101)
                      |||.|  +-|+.+|.....|..|+
T Consensus         5 kPF~C~~pGC~q~F~neDhL~vHk   28 (38)
T d1bhia_           5 KPFLCTAPGCGQRFTNEDHLAVHK   28 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHH
T ss_pred             CceecCCCCccccccchHHHHHhh
Confidence            89999  56999999999998875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.0023  Score=25.40  Aligned_cols=21  Identities=29%  Similarity=0.702  Sum_probs=19.0

Q ss_pred             cccccCccccCChHHHhcccC
Q psy11364         81 YACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H~~  101 (101)
                      |.|+.||......+-|+.|+|
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIR   22 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIR   22 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH
T ss_pred             ccccccCcccCCHHHHHHHHH
Confidence            789999999999999999874

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.14  E-value=0.0079  Score=23.53  Aligned_cols=25  Identities=28%  Similarity=0.440  Sum_probs=20.2

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      |-+|..|....+.+..|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3468888888888999999988774

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.0053  Score=25.66  Aligned_cols=23  Identities=35%  Similarity=0.496  Sum_probs=18.8

Q ss_pred             cccchhhcCCHHHHHHHHHhhCC
Q psy11364         56 CFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        56 C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      |..-++.|.....|..|+++|+|
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCC
Confidence            44445689999999999999986

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.97  E-value=0.005  Score=27.75  Aligned_cols=22  Identities=27%  Similarity=0.681  Sum_probs=19.2

Q ss_pred             CCcccccCccccCChHHHhccc
Q psy11364         79 AFYACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        79 kp~~C~~C~k~f~~~~~l~~H~  100 (101)
                      .-|.|..|||.|.-...|.+|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HE   26 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHE   26 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhH
Confidence            4678999999999999998873

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.55  E-value=0.019  Score=23.77  Aligned_cols=26  Identities=19%  Similarity=0.459  Sum_probs=22.6

Q ss_pred             ceecccchhhcCCHHHHHHHHHhhCC
Q psy11364         53 FATCFVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      .|.|..|+|.|..+....+|....+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48899999999999999999876654

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.0048  Score=24.11  Aligned_cols=20  Identities=25%  Similarity=0.579  Sum_probs=9.3

Q ss_pred             cccccCccccCChHHHhccc
Q psy11364         81 YACSSCSHVSRSRDALRKHD  100 (101)
Q Consensus        81 ~~C~~C~k~f~~~~~l~~H~  100 (101)
                      |.|+.|+-...+++.|..|+
T Consensus         3 ~qcphc~tiiarksdlrvhl   22 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHL   22 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHh
Confidence            34444444444444444443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.23  E-value=0.023  Score=21.56  Aligned_cols=22  Identities=23%  Similarity=0.517  Sum_probs=17.1

Q ss_pred             eecccchhhcCCHHHHHHHHHh
Q psy11364         54 ATCFVCGKQLSNQYNLRVHMET   75 (101)
Q Consensus        54 ~~C~~c~~~~~~~~~l~~h~~~   75 (101)
                      |.|+.|-+.|..+.+...|..+
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888777654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.72  E-value=0.032  Score=22.84  Aligned_cols=22  Identities=27%  Similarity=0.504  Sum_probs=16.4

Q ss_pred             cceecccchhhcCCHHHHHHHH
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHM   73 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~   73 (101)
                      ..|.|..||-.|+..+.|..|+
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            3477888888888888877774

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.45  E-value=0.032  Score=27.10  Aligned_cols=22  Identities=23%  Similarity=0.637  Sum_probs=14.5

Q ss_pred             cceecccchhhcCCHHHHHHHH
Q psy11364         52 LFATCFVCGKQLSNQYNLRVHM   73 (101)
Q Consensus        52 ~~~~C~~c~~~~~~~~~l~~h~   73 (101)
                      ..|.|..|++.|.+...|..|+
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHT
T ss_pred             CEEecccccCccCCHHHHHHHH
Confidence            3466777777777777766664

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.16  E-value=0.17  Score=19.78  Aligned_cols=22  Identities=36%  Similarity=0.705  Sum_probs=17.2

Q ss_pred             ceecccchhhcCCHHHHHHHHH
Q psy11364         53 FATCFVCGKQLSNQYNLRVHME   74 (101)
Q Consensus        53 ~~~C~~c~~~~~~~~~l~~h~~   74 (101)
                      .|.|..|+++.......+-|.-
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEe
Confidence            4778888888888888877754

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.03  E-value=0.054  Score=22.40  Aligned_cols=20  Identities=30%  Similarity=0.622  Sum_probs=10.4

Q ss_pred             CcccccCccccCChHHHhcc
Q psy11364         80 FYACSSCSHVSRSRDALRKH   99 (101)
Q Consensus        80 p~~C~~C~k~f~~~~~l~~H   99 (101)
                      -|.|.+|.+.+..-+++.+|
T Consensus         8 ~yRC~~C~r~YTHISNFCRH   27 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRH   27 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHH
Confidence            35555555555555554443

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.02  E-value=0.12  Score=19.80  Aligned_cols=21  Identities=33%  Similarity=0.589  Sum_probs=14.2

Q ss_pred             ccchhhcCCHHHHHHHHHhhC
Q psy11364         57 FVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        57 ~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      ..|+++|..-..|+.|+-.|+
T Consensus         7 e~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           7 ENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TTCCCEESSHHHHHHHHHHHH
T ss_pred             cCchHHHhhccceEEEeeccc
Confidence            357777777777777766554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.09  E-value=0.56  Score=20.69  Aligned_cols=31  Identities=35%  Similarity=0.447  Sum_probs=24.6

Q ss_pred             CCcceecccchhhcCCHHHHHHHHHh-hCCCC
Q psy11364         50 SKLFATCFVCGKQLSNQYNLRVHMET-HQNAF   80 (101)
Q Consensus        50 ~~~~~~C~~c~~~~~~~~~l~~h~~~-h~~kp   80 (101)
                      .+.|-.|+.|+-...+..+|.+|... |..||
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            36778999999999999999999875 43344

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.97  E-value=0.055  Score=21.21  Aligned_cols=15  Identities=40%  Similarity=0.674  Sum_probs=7.1

Q ss_pred             cchhhcCCHHHHHHH
Q psy11364         58 VCGKQLSNQYNLRVH   72 (101)
Q Consensus        58 ~c~~~~~~~~~l~~h   72 (101)
                      .|++.|+.+..|.-|
T Consensus         7 gc~kifsnrqylnhh   21 (30)
T d2dlka1           7 GCGRIFSNRQYLNHH   21 (30)
T ss_dssp             TTCCEESSHHHHHHH
T ss_pred             CchhhhccHHHHHhH
Confidence            455555554444433

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.34  E-value=0.11  Score=25.07  Aligned_cols=20  Identities=20%  Similarity=0.464  Sum_probs=15.7

Q ss_pred             ccccCccccCChHHHhcccC
Q psy11364         82 ACSSCSHVSRSRDALRKHDK  101 (101)
Q Consensus        82 ~C~~C~k~f~~~~~l~~H~~  101 (101)
                      -|..|+|.|.....|..|++
T Consensus        17 YCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          17 RCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             EETTTTEECSSHHHHHHHTT
T ss_pred             ecccccCccCCHHHHHHHHc
Confidence            47788888888888887764

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.13  E-value=0.13  Score=24.50  Aligned_cols=36  Identities=14%  Similarity=0.319  Sum_probs=25.2

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCccc
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSHV   89 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k~   89 (101)
                      ..-|.|+.|++.|..-..+.   -+-.. .-|.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCCE
Confidence            45599999999998766543   23333 67899988743

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.47  E-value=1.2  Score=21.03  Aligned_cols=27  Identities=22%  Similarity=0.447  Sum_probs=24.2

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhC
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQ   77 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~   77 (101)
                      ...|.|..|...|.....|..|...|.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhcc
Confidence            456999999999999999999998886

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=83.36  E-value=0.53  Score=18.62  Aligned_cols=25  Identities=24%  Similarity=0.659  Sum_probs=18.3

Q ss_pred             eec--ccchhhcCCHHHHHHHHHhhCC
Q psy11364         54 ATC--FVCGKQLSNQYNLRVHMETHQN   78 (101)
Q Consensus        54 ~~C--~~c~~~~~~~~~l~~h~~~h~~   78 (101)
                      |.|  +.|+-.|.....|..|+-.|+|
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcC
Confidence            555  4677788888888888777764

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.42  E-value=0.83  Score=18.65  Aligned_cols=25  Identities=24%  Similarity=0.378  Sum_probs=21.3

Q ss_pred             CcceecccchhhcCCHHHHHHHHHh
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMET   75 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~   75 (101)
                      ++.|.|+.|-+-...+..+.+|+..
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHHh
Confidence            5678999999999999999999753

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.39  E-value=0.2  Score=21.21  Aligned_cols=25  Identities=28%  Similarity=0.546  Sum_probs=17.4

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCcc
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSH   88 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k   88 (101)
                      ++.|.|..||..+.             + .|-.|++||.
T Consensus         3 ~~~~~C~vCG~i~~-------------g~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYTAV-------------DEAPEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCEEE-------------SCCCSBCTTTCC
T ss_pred             CcEEECCCCCCEec-------------CCCCCcCCCCCC
Confidence            35688888886542             3 5788888874

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=81.04  E-value=0.23  Score=20.90  Aligned_cols=25  Identities=28%  Similarity=0.683  Sum_probs=17.3

Q ss_pred             CcceecccchhhcCCHHHHHHHHHhhCC-CCcccccCcc
Q psy11364         51 KLFATCFVCGKQLSNQYNLRVHMETHQN-AFYACSSCSH   88 (101)
Q Consensus        51 ~~~~~C~~c~~~~~~~~~l~~h~~~h~~-kp~~C~~C~k   88 (101)
                      ++.|.|..||...             .+ -|-.|++||.
T Consensus         3 ~~~~vC~vCGyi~-------------~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYIH-------------KGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCEE-------------ESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCEe-------------eCCCCCcCCCCCC
Confidence            4568888888543             23 5778888874