Psyllid ID: psy11593

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Protein Sequence
MRKSHDLTTPGFMLVKRINTINIKQANKNDNLKSNANSICGSYQFFPYPKEFYNCKLATNGEVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSKPKPPRAKAEV
Secondary Structure (PSIPRED)
cccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEEEcEEEHHHcccccccccccccccccccccccccccHHcEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mrkshdlttpgfMLVKRINTInikqankndnlksnansicgsyqffpypkefyncklatngevrevgpEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLvfadegfhVGRFINLVRAhtiqnpldtlkvgVPALLYVIQNNLLYISasnldaatSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSvvekarpadfvenRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLlslpcaactcfisdwdkifqhgffyNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLysrtpsskpkpprakaev
Flexible Loop (DISEMBL)
mrkshdlttpgfmLVKRINTINikqankndnlKSNANSICGSYQFFPYPKEFYNCKLATNGEVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYsrtpsskpkpprakaev
Low Complexity Region (SEG)
MRKSHDLTTPGFMLVKRINTINIKQANKNDNLKSNANSICGSYQFFPYPKEFYNCKLATNGEVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQlkilttaifaiillkkkiskiQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTpsskpkppRAKAEV
Disordered region (IsUnstruct)
**********GFMLVKRINTINIKQANK**NLKSNANSICGSYQFFPYPKEFYNCKLATNGEVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS****************
Disordered Region (DISOPRED)
******L**PGFMLVKRINT**********************************************************KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS**********VENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFL******************
Disordered Region (DISEMBL)
********TPGFMLVKRINTINIKQANKNDNLKSNANSICGSYQFFPYPKEFYNCKLATNGEVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSR***************
Disordered Region (DISPRO)
*****DLTTPGFMLVKRINTINIKQANKNDNLKSNANSICGSYQFFPYPKEFYNCKLAT***************AFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVV*******FVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP*************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRKSHDLTTPGFMLVKRINTINIKQANKNDNLKSNANSICGSYQFFPYPKEFYNCKLATNGEVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSKPKPPRAKAEV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	400	2.2.26 [Sep-21-2011]
Q93890	368	UDP-galactose/UDP-N-acety	yes	N/A	0.825	0.896	0.445	8e-72
Q58DA6	393	UDP-galactose translocato	yes	N/A	0.787	0.801	0.473	1e-66
P78381	396	UDP-galactose translocato	yes	N/A	0.785	0.792	0.468	4e-66
Q6AXR5	326	UDP-N-acetylglucosamine t	yes	N/A	0.797	0.978	0.425	7e-66
Q8WMS0	397	UDP-galactose translocato	yes	N/A	0.785	0.790	0.465	9e-66
Q9R0M8	390	UDP-galactose translocato	yes	N/A	0.787	0.807	0.470	9e-66
Q8R1T4	326	UDP-N-acetylglucosamine t	no	N/A	0.797	0.978	0.425	4e-65
P87041	353	UDP-galactose transporter	yes	N/A	0.8	0.906	0.428	9e-65
O77592	326	UDP-N-acetylglucosamine t	no	N/A	0.797	0.978	0.422	1e-64
Q6YC49	326	UDP-N-acetylglucosamine t	no	N/A	0.797	0.978	0.419	2e-64

>sp|Q93890|SRF3_CAEEL UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 OS=Caenorhabditis elegans GN=srf-3 PE=1 SV=5

 Score =  271 bits (692), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 150/337 (44%), Positives = 220/337 (65%), Gaps = 7/337 (2%)

Query: 65  EVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLV 124
            VG E +QS+  M KT  LI LTLQN+I +L +RY+R +  D +F+S+  V + EV+K  
Sbjct: 29  SVGRESSQSKGNM-KTAILIWLTLQNSIHTLLIRYSRAREVDAMFVSTVAVWLTEVIKCF 87

Query: 125 VCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAAT 184
           +CL LV  +E     RFI+ +R   ++ P DTLKV +PA++Y++QNNL Y++AS+LDAAT
Sbjct: 88  ICLFLVAQEETPR--RFIHALRTQILEQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAAT 145

Query: 185 SQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENR 244
             +T QLKI T AIF +I+L++ +++ QW +L +L VGV+LVQL     K       E+ 
Sbjct: 146 FMITSQLKIFTAAIFTVIILRRSLNRTQWFALAVLFVGVSLVQLQGTKAKESSG---ESP 202

Query: 245 MLGFAATILACLLSGLAGVYFEMILKGS-DVSIWMRNVQLSLLSLPCAACTCFISDWDKI 303
            +GF A ++AC LSG AG+YFE ILKGS  VS+WMRNVQ+++ S+P +    ++ D   +
Sbjct: 203 FVGFVAVVVACCLSGFAGIYFEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTV 262

Query: 304 FQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAF 363
            ++G  Y +   +   VL    GGL VAV +KYADNI K FATS+AI+L+ +  ++LF F
Sbjct: 263 NEYGLLYGFDSIVWLTVLWYGVGGLSVAVCIKYADNIAKNFATSVAIILSTIGSIFLFDF 322

Query: 364 VITFQFIVGAFFVMCSVFLYSRTPSSKPKPPRAKAEV 400
           + +F F++GA  V+ S+FLYS   S      R + E+
Sbjct: 323 IPSFTFLLGASLVIFSIFLYSSHQSMVAALGRLRGEI 359

Acts as a transporter of both UDP-galactose and UDP-N-acetylglucosamine into the Golgi lumen.
Caenorhabditis elegans (taxid: 6239)

>sp|Q58DA6|S35A2_BOVIN UDP-galactose translocator OS=Bos taurus GN=SLC35A2 PE=2 SV=1

 Score =  254 bits (648), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/321 (47%), Positives = 207/321 (64%), Gaps = 6/321 (1%)

Query: 65  EVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLV 124
           E G   A  R   LK  SL  L +QNA + LS+RYAR    D  F ++T V+MAEV+K +
Sbjct: 24  EPGTSSAAHR--RLKYISLAVLVVQNASLILSIRYARTLPGDRFF-ATTAVVMAEVLKGL 80

Query: 125 VCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAAT 184
            CL L+FA +  +V   +  +    +   +DTLK+ VP+L+Y +QNNL YI+ SNL AAT
Sbjct: 81  TCLLLLFAQKRGNVKHLVLFLHEAVLVQYMDTLKLAVPSLIYTLQNNLQYIAISNLPAAT 140

Query: 185 SQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA-RPADFVEN 243
            QVTYQLKILTTA+F++++L + +S++QW SL++L  GVA+VQ         RP D  +N
Sbjct: 141 FQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPLD--QN 198

Query: 244 RMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKI 303
             +G AA + +CL SG AGVYFE ILKGS  S+W+RN+QL L          + ++   +
Sbjct: 199 PGVGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAV 258

Query: 304 FQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAF 363
              GFF+ YT  +  +VL  A GGL+VAVVVKYADNILKGFATSL+IVL+ V  + LF F
Sbjct: 259 THRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGF 318

Query: 364 VITFQFIVGAFFVMCSVFLYS 384
            +   F +GA  V+ +V+LYS
Sbjct: 319 HVDPLFALGAGLVIGAVYLYS 339

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Bos taurus (taxid: 9913)

>sp|P78381|S35A2_HUMAN UDP-galactose translocator OS=Homo sapiens GN=SLC35A2 PE=2 SV=1

 Score =  252 bits (643), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 149/318 (46%), Positives = 205/318 (64%), Gaps = 4/318 (1%)

Query: 68  PEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCL 127
           P  A +    LK  SL  L +QNA + LS+RYAR    D  F ++T V+MAEV+K + CL
Sbjct: 25  PGTASAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFF-ATTAVVMAEVLKGLTCL 83

Query: 128 GLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQV 187
            L+FA +  +V   +  +    +   +DTLK+ VP+L+Y +QNNL Y++ SNL AAT QV
Sbjct: 84  LLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQV 143

Query: 188 TYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA-RPADFVENRML 246
           TYQLKILTTA+F++++L + +S++QW SL++L  GVA+VQ         RP D  +N   
Sbjct: 144 TYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPLD--QNPGA 201

Query: 247 GFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQH 306
           G AA + +CL SG AGVYFE ILKGS  S+W+RN+QL L          + ++   +   
Sbjct: 202 GLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATR 261

Query: 307 GFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVIT 366
           GFF+ YT  +  +VL  A GGL+VAVVVKYADNILKGFATSL+IVL+ V  + LF F + 
Sbjct: 262 GFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVD 321

Query: 367 FQFIVGAFFVMCSVFLYS 384
             F +GA  V+ +V+LYS
Sbjct: 322 PLFALGAGLVIGAVYLYS 339

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Homo sapiens (taxid: 9606)

>sp|Q6AXR5|S35A3_RAT UDP-N-acetylglucosamine transporter OS=Rattus norvegicus GN=Slc35a3 PE=2 SV=1

 Score =  251 bits (641), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 201/322 (62%), Gaps = 3/322 (0%)

Query: 78  LKTTSLITLTLQNAIVSLSMRYAR-MKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGF 136
           LK  SL  L  Q   + L+MRY+R +K +   ++SST V++AE +K++ C+ LV+ D   
Sbjct: 5   LKYLSLGILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAEFLKIMACIFLVYKDSKC 64

Query: 137 HVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTT 196
            V     ++    +  P++TLK+ +P+ +Y +QNNLLY++ SNLDAAT QVTYQLKILTT
Sbjct: 65  SVRTLNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTT 124

Query: 197 AIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADF-VENRMLGFAATILAC 255
           A+F++ +L KK+   QW+SLVIL+ GVA VQ  S  ++    D    ++ +G  A ++AC
Sbjct: 125 ALFSVSMLGKKLGMYQWLSLVILMAGVAFVQWPSDSQELNSKDLSTGSQFVGLMAVLIAC 184

Query: 256 LLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWF 315
             SG AGVYFE ILK +  S+W+RN+QL            ++ D + + ++GFF  Y   
Sbjct: 185 FSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNQL 244

Query: 316 IVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQ-VYLFAFVITFQFIVGAF 374
              +V+L A GGL++A V+KYADNILKGFATSL+I+L+ +    +L  FV T  F +GA 
Sbjct: 245 TWIVVVLQALGGLVIAAVIKYADNILKGFATSLSIILSTIISYFWLQDFVPTSVFFLGAI 304

Query: 375 FVMCSVFLYSRTPSSKPKPPRA 396
            V+ + FLY   P     P +A
Sbjct: 305 LVIAATFLYGYDPKPAGNPTKA 326

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Rattus norvegicus (taxid: 10116)

>sp|Q8WMS0|S35A2_CANFA UDP-galactose translocator OS=Canis familiaris GN=SLC35A2 PE=2 SV=2

 Score =  251 bits (640), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 148/318 (46%), Positives = 205/318 (64%), Gaps = 4/318 (1%)

Query: 68  PEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCL 127
           P  A +    LK  SL  L +QNA + LS+RYAR    D  F ++T V+MAEV+K + CL
Sbjct: 25  PGTASAAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFF-ATTAVVMAEVLKGLTCL 83

Query: 128 GLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQV 187
            L+FA +  +V      +    +   +DTLK+ VP+L+Y +QNNL Y++ SN+ AAT QV
Sbjct: 84  LLLFAQKRGNVKHLALFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNMPAATFQV 143

Query: 188 TYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA-RPADFVENRML 246
           TYQLKILTTA+F++++L + +S++QW SL++L  GVA+VQ         RP D  +N   
Sbjct: 144 TYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPLD--QNPGA 201

Query: 247 GFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQH 306
           G AA + +CL SG AGVYFE ILKGS  S+W+RN+QL L          + ++   + + 
Sbjct: 202 GLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVARR 261

Query: 307 GFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVIT 366
           GFF+ YT  +  +VL  A GGL+VAVVVKYADNILKGFATSL+IVL+ V  + LF F + 
Sbjct: 262 GFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVD 321

Query: 367 FQFIVGAFFVMCSVFLYS 384
             F +GA  V+ +V+LYS
Sbjct: 322 PLFALGAGLVIGAVYLYS 339

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Canis familiaris (taxid: 9615)

>sp|Q9R0M8|S35A2_MOUSE UDP-galactose translocator OS=Mus musculus GN=Slc35a2 PE=2 SV=1

 Score =  251 bits (640), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 151/321 (47%), Positives = 206/321 (64%), Gaps = 6/321 (1%)

Query: 65  EVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLV 124
           E G   A  R   LK  SL  L +QNA + LS+RYAR    D  F ++T V+MAEV+K +
Sbjct: 24  EPGSTTAAHR--RLKYISLAVLVVQNASLILSIRYARTLPGDRFF-ATTAVVMAEVLKGL 80

Query: 125 VCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAAT 184
            CL L+FA +  +V   +  +    +   +DTLK+ VP+L+Y +QNNL Y++ SNL AAT
Sbjct: 81  TCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAAT 140

Query: 185 SQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA-RPADFVEN 243
            QVTYQLKILTTA+F++++L + +S++QW SL++L  GVA+VQ         RP D  +N
Sbjct: 141 FQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGSGPRPLD--QN 198

Query: 244 RMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKI 303
              G AA + +CL SG AGVYFE ILKGS  S+W+RN+QL L          + ++   +
Sbjct: 199 PGAGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAV 258

Query: 304 FQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAF 363
              GFF+ YT  +  +VL  A GGL+VAVVVKYADNILKGFATSL+IVL+ V  + LF F
Sbjct: 259 ASQGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGF 318

Query: 364 VITFQFIVGAFFVMCSVFLYS 384
            +   F +GA  V+ +V+LYS
Sbjct: 319 HLDPLFALGAGLVIGAVYLYS 339

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Mus musculus (taxid: 10090)

>sp|Q8R1T4|S35A3_MOUSE UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35a3 PE=2 SV=1

 Score =  248 bits (634), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 199/322 (61%), Gaps = 3/322 (0%)

Query: 78  LKTTSLITLTLQNAIVSLSMRYAR-MKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGF 136
           LK  SL  L  Q   + L+MRY+R +K +   ++SST V++AE +K++ C+ LV+ D   
Sbjct: 5   LKYLSLGILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAEFLKIMACIFLVYKDSKC 64

Query: 137 HVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTT 196
            V     ++    +  P++TLK+ +P+ +Y +QNNLLY++ SNLDAAT QVTYQLKILTT
Sbjct: 65  SVRALNRVLHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTT 124

Query: 197 AIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADF-VENRMLGFAATILAC 255
           A+F++ +L KK+   QW+SLVIL+ GVA VQ  S  ++    D    ++ +G  A + AC
Sbjct: 125 ALFSVSMLGKKLGVYQWLSLVILMAGVAFVQWPSDSQELNSKDLSTGSQFVGLMAVLTAC 184

Query: 256 LLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWF 315
             SG AGVYFE ILK +  S+W+RN+QL            ++ D + + ++GFF  Y   
Sbjct: 185 FSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNQL 244

Query: 316 IVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQV-YLFAFVITFQFIVGAF 374
              +V L A GGL++A V+KYADNILKGFATSL+I+L+ +    +L  FV T  F +GA 
Sbjct: 245 TWIVVALQALGGLVIAAVIKYADNILKGFATSLSIILSTIISYFWLQDFVPTSVFFLGAI 304

Query: 375 FVMCSVFLYSRTPSSKPKPPRA 396
            V+ + FLY   P     P +A
Sbjct: 305 LVIAATFLYGYDPKPAGNPTKA 326

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Mus musculus (taxid: 10090)

>sp|P87041|GMS1_SCHPO UDP-galactose transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gms1 PE=2 SV=3

 Score =  247 bits (631), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 140/327 (42%), Positives = 216/327 (66%), Gaps = 7/327 (2%)

Query: 74  RAFMLKTTSLITLTLQNAIVSLSMRYARM--KNKDELFISSTGVLMAEVVKLVVCLGLVF 131
           +   +K  +L+ LT+QN+ + L++ Y+R+     D+ + +ST VL+ E++KLVVC  + +
Sbjct: 11  KGIPMKYIALVLLTVQNSALILTLNYSRIMPGYDDKRYFTSTAVLLNELIKLVVCFSVGY 70

Query: 132 ADEGFHVGRFINLVRAHTIQ-NPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQ 190
                +VG+   L RA   Q    D+ K+ +PA LY  QNNL Y++A NL AA+ QVTYQ
Sbjct: 71  HQFRKNVGKEAKL-RAFLPQIFGGDSWKLAIPAFLYTCQNNLQYVAAGNLTAASFQVTYQ 129

Query: 191 LKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAA 250
           LKILTTAIF+I+LL +++  ++W SL +L  G+A+VQL ++    + +    N + GF+A
Sbjct: 130 LKILTTAIFSILLLHRRLGPMKWFSLFLLTGGIAIVQLQNLNSDDQMSAGPMNPVTGFSA 189

Query: 251 TILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSL-PCAACTCFISDWDKIFQHGFF 309
            ++ACL+SGLAGVYFE +LK ++ S+W+RNVQLS  SL PC   T  + D+  I ++GFF
Sbjct: 190 VLVACLISGLAGVYFEKVLKDTNPSLWVRNVQLSFFSLFPC-LFTILMKDYHNIAENGFF 248

Query: 310 YNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQF 369
           + Y   +   +LL A GG+IVA+ V +ADNI+K F+TS++I+++ +  VYL  F I+  F
Sbjct: 249 FGYNSIVWLAILLQAGGGIIVALCVAFADNIMKNFSTSISIIISSLASVYLMDFKISLTF 308

Query: 370 IVGAFFVMCSVFLYSRTPSSKPKPPRA 396
           ++G   V+ + FLY++ P SKP P R 
Sbjct: 309 LIGVMLVIAATFLYTK-PESKPSPSRG 334

Essential for the transport of UDP-galactose into the lumen of Golgi apparatus.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|O77592|S35A3_CANFA UDP-N-acetylglucosamine transporter OS=Canis familiaris GN=SLC35A3 PE=2 SV=1

 Score =  247 bits (631), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 201/322 (62%), Gaps = 3/322 (0%)

Query: 78  LKTTSLITLTLQNAIVSLSMRYAR-MKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGF 136
           LK  SL  L  Q   + L+MRY+R +K +   ++SST V++AE++K++ C+ LV+ D   
Sbjct: 5   LKYLSLGILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKC 64

Query: 137 HVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTT 196
            +     ++    +  P++TLK+ +P+ +Y +QNNLLY++ SNLDAAT QVTYQLKILTT
Sbjct: 65  SLRALNRILHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTT 124

Query: 197 AIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADF-VENRMLGFAATILAC 255
           A+F++ +L KK+   QW+SLVIL+ GVA VQ  S  ++    +    ++ +G  A + AC
Sbjct: 125 ALFSVSMLSKKLGVYQWLSLVILMTGVAFVQWPSDSQELDSKELSAGSQFVGLMAVLTAC 184

Query: 256 LLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWF 315
             SG AGVYFE ILK +  S+W+RN+QL            +I D + + ++GFF  Y   
Sbjct: 185 FSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYIYDGELVSKNGFFQGYNRL 244

Query: 316 IVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQV-YLFAFVITFQFIVGAF 374
              +V+L A GGL++A V+KYADNILKGFATSL+I+L+ +    +L  FV T  F +GA 
Sbjct: 245 TWIVVILQALGGLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAI 304

Query: 375 FVMCSVFLYSRTPSSKPKPPRA 396
            V+ + FLY   P     P +A
Sbjct: 305 LVITATFLYGYDPKPTGNPTKA 326

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Canis familiaris (taxid: 9615)

>sp|Q6YC49|S35A3_BOVIN UDP-N-acetylglucosamine transporter OS=Bos taurus GN=SLC35A3 PE=2 SV=1

 Score =  246 bits (629), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/322 (41%), Positives = 201/322 (62%), Gaps = 3/322 (0%)

Query: 78  LKTTSLITLTLQNAIVSLSMRYAR-MKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGF 136
           LK  SL  L  Q   + L+MRY+R +K +   ++SST V++AE++K++ C+ LV+ D   
Sbjct: 5   LKYLSLGILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKC 64

Query: 137 HVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTT 196
            +     ++    +  P++TLK+ +P+ +Y +QNNLLY++ SNLDAAT QVTYQLKILTT
Sbjct: 65  SLRALNRILHDEILNKPMETLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTT 124

Query: 197 AIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADF-VENRMLGFAATILAC 255
           A+F++ +L KK+   QW+SLVIL+ GVA VQ  S  ++    +    ++ +G  A + AC
Sbjct: 125 ALFSVSMLSKKLGVYQWLSLVILMTGVAFVQWPSDSQELNSKELSAGSQFVGLMAVLTAC 184

Query: 256 LLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWF 315
             SG AGVYFE ILK +  S+W+RN+QL            ++ D + + ++GFF  Y   
Sbjct: 185 FSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNRL 244

Query: 316 IVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQV-YLFAFVITFQFIVGAF 374
              +V+L A GGL++A V+KYADNILKGFATSL+I+L+ +    +L  FV T  F +GA 
Sbjct: 245 TWIVVVLQALGGLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAI 304

Query: 375 FVMCSVFLYSRTPSSKPKPPRA 396
            V+ + FLY   P     P +A
Sbjct: 305 LVITATFLYGYDPKPAGNPTKA 326

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
193643491	348	PREDICTED: UDP-galactose translocator-li	0.82	0.942	0.568	1e-102
66533109	332	PREDICTED: UDP-galactose translocator [A	0.79	0.951	0.584	1e-102
340715442	333	PREDICTED: UDP-galactose translocator-li	0.822	0.987	0.574	1e-101
380013404	332	PREDICTED: UDP-galactose translocator-li	0.79	0.951	0.575	1e-100
157136674	352	sugar transporter [Aedes aegypti] gi|108	0.785	0.892	0.591	1e-98
347963722	359	AGAP000387-PA [Anopheles gambiae str. PE	0.8	0.891	0.566	5e-98
321463852	332	hypothetical protein DAPPUDRAFT_214678 [	0.817	0.984	0.554	2e-97
345492073	336	PREDICTED: UDP-galactose translocator-li	0.782	0.931	0.606	4e-97
170046002	354	UDP-N-acetylglucosamine transporter [Cul	0.777	0.878	0.581	5e-97
195165619	360	GL19812 [Drosophila persimilis] gi|19410	0.777	0.863	0.551	2e-96

>gi|193643491|ref|XP_001950746.1| PREDICTED: UDP-galactose translocator-like [Acyrthosiphon pisum]

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 187/329 (56%), Positives = 249/329 (75%), Gaps = 1/329 (0%)

Query: 62  EVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVV 121
           E++    +   SR   LK  +L+TLTLQNA+V+LSMRYAR +  D +FISST V+MAEVV
Sbjct: 11  EIQVETMQTNHSRNSSLKVITLVTLTLQNAMVALSMRYARTRPGD-MFISSTAVVMAEVV 69

Query: 122 KLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLD 181
           KL VCL LV+  E      FI+++    I+ P+DTLKV +P+L+Y+IQNNLLY+S SNLD
Sbjct: 70  KLSVCLVLVYRIESLSWKHFISILNNTIIKQPMDTLKVCIPSLVYLIQNNLLYVSTSNLD 129

Query: 182 AATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFV 241
           AAT QVTYQLKI TTA+F++++LK+K+ + QWI+LVIL++GV LVQL++  +K++     
Sbjct: 130 AATYQVTYQLKIFTTAVFSVLILKRKLLRHQWIALVILILGVILVQLNNSTDKSKETHPN 189

Query: 242 ENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWD 301
           +NR++G  A ++AC LSG AGVYFE ILKG+++SIWMRN+QLS +S+P     CF++DW+
Sbjct: 190 QNRIVGLVAALIACCLSGFAGVYFEKILKGAEISIWMRNIQLSFVSIPIGFIMCFVTDWN 249

Query: 302 KIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLF 361
            I   GFF+ Y  +I +L+ L A+GGLIVA+VVKYADNILKGFATSLAIV+ACVF +Y F
Sbjct: 250 IINDKGFFFGYDLYIAYLISLQAAGGLIVAMVVKYADNILKGFATSLAIVVACVFSMYFF 309

Query: 362 AFVITFQFIVGAFFVMCSVFLYSRTPSSK 390
            F I+ QF+VG   VMCS+FLYS T   K
Sbjct: 310 NFTISIQFVVGTMLVMCSIFLYSYTKQKK 338

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66533109|ref|XP_624386.1| PREDICTED: UDP-galactose translocator [Apis mellifera]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/318 (58%), Positives = 245/318 (77%), Gaps = 2/318 (0%)

Query: 72  QSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVF 131
           Q    +LK  SLITLTLQNA+V LSMRYAR ++ D +F+SST V+MAEVVK + CL LVF
Sbjct: 5   QRSGQILKYVSLITLTLQNALVGLSMRYARTRSGD-MFLSSTAVVMAEVVKFLTCLILVF 63

Query: 132 ADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQL 191
            +EG +  +F + ++   I+ P+DTLKV VP+LLY+IQNNLLYISASNLDAAT QVTYQL
Sbjct: 64  VEEG-NFLKFFDSLKLTIIKQPIDTLKVSVPSLLYIIQNNLLYISASNLDAATYQVTYQL 122

Query: 192 KILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAAT 251
           KILTTA FA+++L++ +   QW +L++LV+GV LVQL+   +   P+   +N +LGF+A 
Sbjct: 123 KILTTAFFAVVILRRSLRNTQWGALILLVIGVVLVQLAQSSDTTLPSGREQNHLLGFSAA 182

Query: 252 ILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYN 311
           + AC LSG AG+YFE ILK SD+S+WMRN+QLSLLSLP    TCF++D + + + GFF+ 
Sbjct: 183 LSACFLSGFAGIYFEKILKDSDISVWMRNIQLSLLSLPFGLITCFVNDGEMLQKQGFFFG 242

Query: 312 YTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIV 371
           Y  FI +L++L A GGLIVA+VVKYADNILKGFATSLAI+++CV  +YLF F ++FQF +
Sbjct: 243 YDLFICYLIVLQAGGGLIVAMVVKYADNILKGFATSLAIIISCVASIYLFNFNLSFQFSI 302

Query: 372 GAFFVMCSVFLYSRTPSS 389
           GA  V+CS+F+YS  P S
Sbjct: 303 GAILVICSIFMYSHQPKS 320

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715442|ref|XP_003396222.1| PREDICTED: UDP-galactose translocator-like [Bombus terrestris]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/331 (57%), Positives = 254/331 (76%), Gaps = 2/331 (0%)

Query: 69  EMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLG 128
           E  Q  A  LK  SLITLTLQNA+V LSMRYAR ++ D +F+SST V+MAEVVKL+ CL 
Sbjct: 3   ESQQRGAQTLKYISLITLTLQNALVGLSMRYARTRSGD-MFLSSTAVVMAEVVKLLTCLI 61

Query: 129 LVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVT 188
           LV  +EG +  +F++ +++  I+ P+DTLKV VP+LLY++QNNLLYISASNLDAAT QVT
Sbjct: 62  LVLVEEG-NFPKFVDALKSTIIKQPVDTLKVSVPSLLYIVQNNLLYISASNLDAATYQVT 120

Query: 189 YQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGF 248
           YQLKILTTA FA+++L+K +   QW +L++LV+GV LVQL+   + A P+   +N +LGF
Sbjct: 121 YQLKILTTAFFAVVILRKSLKNTQWGALILLVIGVVLVQLAQSSDTALPSGIEQNHLLGF 180

Query: 249 AATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGF 308
           +A + AC LSG AG+YFE ILK SD+S+WMRNVQLSLLSLP    TCF++D + + + GF
Sbjct: 181 SAALSACFLSGFAGIYFEKILKDSDISVWMRNVQLSLLSLPFGLITCFVNDGEMLRKQGF 240

Query: 309 FYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQ 368
           F+ Y  FI +L++L A GGLIVA+VVKYADNILKGFATSLAI+++C+  +YLF F ++FQ
Sbjct: 241 FFGYDLFICYLIVLQAGGGLIVAMVVKYADNILKGFATSLAIIISCIASIYLFDFNLSFQ 300

Query: 369 FIVGAFFVMCSVFLYSRTPSSKPKPPRAKAE 399
           F +GA  V+CS+F+YSR P S      ++++
Sbjct: 301 FSLGAILVICSIFMYSRQPKSTFVDKHSRSD 331

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013404|ref|XP_003690750.1| PREDICTED: UDP-galactose translocator-like [Apis florea]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/318 (57%), Positives = 245/318 (77%), Gaps = 2/318 (0%)

Query: 72  QSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVF 131
           Q    +LK  SLITLTLQNA+V LSMRYAR ++ D +F+SST V+MAEVVK + CL LVF
Sbjct: 5   QRTGQILKYVSLITLTLQNALVGLSMRYARTRSGD-MFLSSTAVVMAEVVKFLTCLILVF 63

Query: 132 ADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQL 191
            +EG +  +F + ++   I+ P+DTLKV VP+LLY+IQNNLLY+SASNLDAAT QVTYQL
Sbjct: 64  IEEG-NFLKFFDSLKLIIIKQPIDTLKVSVPSLLYIIQNNLLYVSASNLDAATYQVTYQL 122

Query: 192 KILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAAT 251
           KILTTA FA+++L++ +   QW +L++LV+GV LVQL+   + + P+   +N +LGF+A 
Sbjct: 123 KILTTAFFAVVILRRSLRNTQWGALILLVIGVVLVQLAQSSDTSLPSGIEQNHLLGFSAA 182

Query: 252 ILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYN 311
           + AC LSG AG+YFE ILK SD+S+W+RN+QLSLLSLP    TCF++D + + + GFF+ 
Sbjct: 183 LSACFLSGFAGIYFEKILKDSDISVWIRNIQLSLLSLPFGLITCFVNDGEMLQKQGFFFG 242

Query: 312 YTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIV 371
           Y  FI +L++L A GGLIVA+VVKYADNILKGFATSLAI+++CV  +YLF F ++FQF +
Sbjct: 243 YDLFICYLIILQAGGGLIVAMVVKYADNILKGFATSLAIIISCVASIYLFNFNLSFQFSI 302

Query: 372 GAFFVMCSVFLYSRTPSS 389
           GA  V+ S+F+YS  P S
Sbjct: 303 GAILVILSIFMYSHQPKS 320

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157136674|ref|XP_001663817.1| sugar transporter [Aedes aegypti] gi|108869894|gb|EAT34119.1| AAEL013608-PA [Aedes aegypti]

 Score =  365 bits (938), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 191/323 (59%), Positives = 241/323 (74%), Gaps = 9/323 (2%)

Query: 78  LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFH 137
           LK  SL+TLTLQNAI+ LSMRYAR +    +F+SST V+MAEVVKL+  L LVF +EG  
Sbjct: 12  LKYLSLVTLTLQNAILGLSMRYARTR-PGAMFLSSTAVVMAEVVKLLTSLVLVFMEEGKS 70

Query: 138 VGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTA 197
           V R  + + +  ++ PLDTLK+ VP+ LY++QNNLLY+SAS+LDAAT QVTYQLKILTTA
Sbjct: 71  VRRLQSALHSTIVKQPLDTLKICVPSFLYILQNNLLYVSASHLDAATYQVTYQLKILTTA 130

Query: 198 IFAIILLKKKISKIQWISLVILVVGVALVQL----SSVVEKAR----PADFVENRMLGFA 249
           +FA+I+L+KK+   QW +LV LVVGVA VQL    SS    +R    P +  +NR+LGF+
Sbjct: 131 VFAVIILRKKLFPTQWAALVALVVGVATVQLAQTDSSGTAASRQQHMPGEPDQNRLLGFS 190

Query: 250 ATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFF 309
           A + AC LSG AG+YFE +LKG+D+SIWMRN+QLSLLSLP    TCF++D  KI   GFF
Sbjct: 191 AALGACFLSGFAGIYFEKMLKGADISIWMRNIQLSLLSLPFGLITCFVNDGSKITSDGFF 250

Query: 310 YNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQF 369
           + Y  FI +L+LL A GGLIVAVVVKYADNILKGFATSLAI+++CV  +YLF F +T QF
Sbjct: 251 FGYDGFIWYLILLQAGGGLIVAVVVKYADNILKGFATSLAIIISCVASMYLFDFNLTMQF 310

Query: 370 IVGAFFVMCSVFLYSRTPSSKPK 392
             GA  V+ S+FLY   P++  K
Sbjct: 311 TFGAALVIASIFLYGYDPNAAAK 333

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347963722|ref|XP_310718.5| AGAP000387-PA [Anopheles gambiae str. PEST] gi|333467064|gb|EAA06715.5| AGAP000387-PA [Anopheles gambiae str. PEST]

 Score =  363 bits (933), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 191/337 (56%), Positives = 247/337 (73%), Gaps = 17/337 (5%)

Query: 78  LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFH 137
           LK  SL+TLTLQNAI+ LSMRY R +  D LF+SST V+MAE+VKL   L LV+ +EG H
Sbjct: 11  LKYLSLVTLTLQNAILGLSMRYGRTRPGD-LFLSSTAVVMAELVKLATSLVLVYLEEGKH 69

Query: 138 VGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTA 197
            GR    +    ++ PLDTLK+ VP++LY+IQNNLLY+SAS+LDAAT QVTYQLKILTTA
Sbjct: 70  FGRLRAALHQTIVKQPLDTLKICVPSMLYIIQNNLLYVSASHLDAATYQVTYQLKILTTA 129

Query: 198 IFAIILLKKKISKIQWISLVILVVGVALVQLSSVVE---------KARPA-DFVE-NRML 246
           +FA+++L++++   QW +LV+LVVGVA VQL+   E         ++ PA D  E NR+L
Sbjct: 130 VFAVLILRRRLLPTQWAALVLLVVGVASVQLAQTGEDSGTAATRQQSMPAGDGPEQNRLL 189

Query: 247 GFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQH 306
           GF+A + AC LSGLAG+YFE +LKG+D+SIWMRN+QLSLLSLP    TC ++D  ++   
Sbjct: 190 GFSAALGACFLSGLAGIYFEKMLKGADISIWMRNIQLSLLSLPFGLLTCAVNDGAQLAAR 249

Query: 307 GFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVIT 366
           GFF+ Y  F+V+LV+L A GGLIVAVVVKYADNILKGFATSLAI+++CV  +YLF F ++
Sbjct: 250 GFFFGYDAFVVYLVVLQAVGGLIVAVVVKYADNILKGFATSLAIIISCVASIYLFDFSLS 309

Query: 367 FQFIVGAFFVMCSVFLYSRTPSSKPKP-----PRAKA 398
            QF VGA  V+ S+FLY   P++         P AKA
Sbjct: 310 LQFTVGAGLVIGSIFLYGYDPAAAKGAKSAVRPSAKA 346

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321463852|gb|EFX74865.1| hypothetical protein DAPPUDRAFT_214678 [Daphnia pulex]

 Score =  362 bits (928), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 184/332 (55%), Positives = 240/332 (72%), Gaps = 5/332 (1%)

Query: 70  MAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGL 129
           M Q  +  +K  SL+TLT+QNA + LSMRYAR +  D +F+SST VLM+E+VKL+ CL L
Sbjct: 1   MEQKNSEKMKYISLVTLTVQNAALGLSMRYARTRVGD-MFLSSTAVLMSELVKLISCLWL 59

Query: 130 VFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTY 189
           V+ +EG  + +    V    I+ PLDTLKV VP+++YV+QNNLLY++AS+LDAAT QVTY
Sbjct: 60  VYHEEGNSITKLKEAVHTQIIKQPLDTLKVCVPSMVYVVQNNLLYVAASHLDAATYQVTY 119

Query: 190 QLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSV----VEKARPADFVENRM 245
           QLKILTTA+F + +LK+++   QW +LV+L+VGVA+VQL+       +K   +   ++R 
Sbjct: 120 QLKILTTALFTVAILKRQLIATQWTALVVLLVGVAMVQLAQTEPEKTDKTASSGPEQHRW 179

Query: 246 LGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQ 305
           +GF A + AC+LSG AG+YFE ILKGS+VS+WMRN+QLS LSLP    TC I DW  I  
Sbjct: 180 VGFGAALAACVLSGFAGIYFEKILKGSNVSVWMRNIQLSFLSLPFGLFTCLIYDWSTINS 239

Query: 306 HGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVI 365
            GFF+ Y  FI +LV+L A+GGL+VA+VVKYADNILKGFATSLAI+L+CV  +YLF F +
Sbjct: 240 QGFFFGYDSFIWYLVVLQATGGLLVAMVVKYADNILKGFATSLAIILSCVVSIYLFNFNL 299

Query: 366 TFQFIVGAFFVMCSVFLYSRTPSSKPKPPRAK 397
           T QF VG   VM SVFLYS TP    +    K
Sbjct: 300 TLQFSVGTLLVMGSVFLYSYTPPKNLQHQNVK 331

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345492073|ref|XP_001601496.2| PREDICTED: UDP-galactose translocator-like [Nasonia vitripennis]

 Score =  361 bits (926), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 191/315 (60%), Positives = 241/315 (76%), Gaps = 2/315 (0%)

Query: 77  MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGF 136
           +LK  SL+TLTLQNA+V LSMRYAR ++ D +F+ ST V MAEVVKL+ CL +VF +EG 
Sbjct: 9   LLKYVSLVTLTLQNALVGLSMRYARTRSGD-MFLYSTAVFMAEVVKLITCLFMVFLEEG- 66

Query: 137 HVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTT 196
              +FI+ +    I+ P DTLKV VP+L+YVIQNNLLY+SASNLDAAT QVTYQLKILTT
Sbjct: 67  SFSKFISALDNTVIKQPKDTLKVCVPSLVYVIQNNLLYVSASNLDAATYQVTYQLKILTT 126

Query: 197 AIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACL 256
           A FAI++LK+ + KIQW +LVIL++GV LVQL+    K  P+   +N +LGF A + AC 
Sbjct: 127 AFFAIVILKRTLKKIQWGALVILLLGVILVQLAQSGPKTVPSGIEQNHLLGFTAALTACF 186

Query: 257 LSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFI 316
           LSG AG+YFE ILKGS++S+WMRNVQLSLLSLP    TC ++D   I   GFF+ Y  F+
Sbjct: 187 LSGFAGIYFEKILKGSEISVWMRNVQLSLLSLPIGFLTCHLNDGKVIRNQGFFFGYDGFV 246

Query: 317 VFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFV 376
           ++LVLL A GGLIVA+VVK+ADNILKGFATSLAIV++CV  +YLF F +T QF +GA  V
Sbjct: 247 IYLVLLQACGGLIVAMVVKHADNILKGFATSLAIVISCVASIYLFNFQLTLQFTLGASLV 306

Query: 377 MCSVFLYSRTPSSKP 391
           +CS+F+YS  P + P
Sbjct: 307 ICSIFMYSHQPKTAP 321

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170046002|ref|XP_001850576.1| UDP-N-acetylglucosamine transporter [Culex quinquefasciatus] gi|167868934|gb|EDS32317.1| UDP-N-acetylglucosamine transporter [Culex quinquefasciatus]

 Score =  360 bits (925), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 186/320 (58%), Positives = 239/320 (74%), Gaps = 9/320 (2%)

Query: 78  LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFH 137
           LK  SL+TLTLQNAI+ LSMRYAR +  D +F+SST V+MAEVVKL   L LVF +EG  
Sbjct: 10  LKYLSLVTLTLQNAILGLSMRYARTRPGD-MFLSSTAVVMAEVVKLATSLVLVFLEEGKS 68

Query: 138 VGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTA 197
           + R    +    ++ P+DTLK+ VP+ LY++QNNLLY+SAS+LDAAT QVTYQLKILTTA
Sbjct: 69  MLRLKATLHNTIVKQPMDTLKICVPSFLYILQNNLLYVSASHLDAATYQVTYQLKILTTA 128

Query: 198 IFAIILLKKKISKIQWISLVILVVGVALVQL----SSVVEKAR----PADFVENRMLGFA 249
           +FA+I+L+K++   QW +LV LV+GVA VQL    SS    +R    P +  +NR+LGF+
Sbjct: 129 VFAVIILRKRLLPTQWAALVALVIGVASVQLAQTDSSGTAASRQQQMPGEPEQNRLLGFS 188

Query: 250 ATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFF 309
           A + AC LSG AG+YFE +LKG+D+SIWMRN+QLSLLSLP    TC ++D  K+  +GFF
Sbjct: 189 AALGACFLSGFAGIYFEKMLKGADISIWMRNIQLSLLSLPFGLLTCIVNDGSKLSANGFF 248

Query: 310 YNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQF 369
           + Y  FI +L++L A GGLIVAVVVKYADNILKGFATSLAI+++CV  +YLF F +T QF
Sbjct: 249 FGYDGFITYLIILQAGGGLIVAVVVKYADNILKGFATSLAIIISCVASMYLFDFTLTMQF 308

Query: 370 IVGAFFVMCSVFLYSRTPSS 389
            VGA  V+ S+FLY   PS+
Sbjct: 309 TVGAALVIGSIFLYGYDPSA 328

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195165619|ref|XP_002023636.1| GL19812 [Drosophila persimilis] gi|194105770|gb|EDW27813.1| GL19812 [Drosophila persimilis]

 Score =  358 bits (920), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 187/339 (55%), Positives = 243/339 (71%), Gaps = 28/339 (8%)

Query: 78  LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFH 137
           LK  SL+TLTLQNAI+ LSMRYAR +  D +F+SST VLMAE  KL+ CL LVF +EG  
Sbjct: 10  LKYISLLTLTLQNAILGLSMRYARTRPGD-IFLSSTAVLMAEFAKLITCLFLVFNEEGKD 68

Query: 138 VGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTA 197
             +F+  +    I NP+DTLKV VP+L+Y++QNNLLY+SAS+LDAAT QVTYQLKILTTA
Sbjct: 69  AQKFVRSLHRTIIANPVDTLKVCVPSLVYIVQNNLLYVSASHLDAATYQVTYQLKILTTA 128

Query: 198 IFAIILLKKKISKIQWISLVILVVGVALVQLSSVVE-----------------------K 234
           +FA+++L++K+   QW +L++LV+G+ LVQL+  V                         
Sbjct: 129 MFAVVILRRKLLTTQWGALLLLVMGIVLVQLAQTVTSPSGSSDSSPSSSSTGGGAASSLS 188

Query: 235 ARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACT 294
           A P    +NRMLG  + + AC LSG AG+YFE ILKG+++S+WMRNVQLSLLS+P    T
Sbjct: 189 AIPE---QNRMLGLWSALGACFLSGFAGIYFEKILKGAEISVWMRNVQLSLLSIPFGLLT 245

Query: 295 CFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLAC 354
           CF++D  +IF+HGFF+ Y +F+ +LVLL A GGLIVAVVVKYADNILKGFATSLAI+++C
Sbjct: 246 CFVNDASRIFEHGFFHGYDFFVWYLVLLQAGGGLIVAVVVKYADNILKGFATSLAIIISC 305

Query: 355 VFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS-SKPK 392
           V  +Y+F F +T QF  GA  V+ S+F+Y   PS S PK
Sbjct: 306 VASIYIFDFNLTLQFSFGAALVIASIFMYGYDPSRSAPK 344

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
FB|FBgn0024994	368	Csat "Csat" [Drosophila melano	0.762	0.828	0.535	3.7e-80
WB|WBGene00005153	368	srf-3 [Caenorhabditis elegans	0.822	0.894	0.419	1.2e-65
UNIPROTKB|Q93890	368	srf-3 "UDP-galactose/UDP-N-ace	0.822	0.894	0.419	1.2e-65
UNIPROTKB|G5EFD3	328	srf-3 "Protein SRF-3, isoform	0.795	0.969	0.416	4.7e-64
ZFIN|ZDB-GENE-070424-281	395	si:dkey-83k24.4 "si:dkey-83k24	0.765	0.774	0.423	1.2e-58
ZFIN|ZDB-GENE-030616-62	347	slc35a2 "solute carrier family	0.765	0.881	0.423	1.9e-58
UNIPROTKB|Q58DA6	393	SLC35A2 "UDP-galactose translo	0.805	0.819	0.435	2.5e-58
UNIPROTKB|F1MZI7	393	SLC35A2 "UDP-galactose translo	0.805	0.819	0.432	3.2e-58
UNIPROTKB|Q8SPM1	396	ugt "Putative UDP-galactose tr	0.805	0.813	0.432	3.2e-58
RGD|2293497	390	Slc35a2 "solute carrier family	0.805	0.825	0.432	4e-58

FB|FBgn0024994 Csat "Csat" [Drosophila melanogaster (taxid:7227)]

 Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
 Identities = 172/321 (53%), Positives = 216/321 (67%)

Query:    78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFH 137
             LK  SL+TLTLQNAI+ LSMRYAR +  D +F+SST VLMAE  KL+ CL LVF +EG  
Sbjct:    22 LKYISLLTLTLQNAILGLSMRYARTRPGD-IFLSSTAVLMAEFAKLITCLFLVFNEEGKD 80

Query:   138 VGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQXXXXXXX 197
               +F+  +    I NP+DTLKV VP+L+Y++QNNLLY+SAS+LDAAT QVTYQ       
Sbjct:    81 AQKFVRSLHKTIIANPMDTLKVCVPSLVYIVQNNLLYVSASHLDAATYQVTYQLKILTTA 140

Query:   198 XXXXXXXXXXXXXXQWISLVILVVGVALVQLS--------SVVEKARPADFV-------E 242
                           QW +L++LV+G+ LVQL+        S    A  A          +
Sbjct:   141 MFAVVILRRKLLNTQWGALLLLVMGIVLVQLAQTEGPTSGSAGGAAAAATAASSGGAPEQ 200

Query:   243 NRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDK 302
             NRMLG  A + AC LSG AG+YFE ILKG+++S+WMRNVQLSLLS+P    TCF++D  +
Sbjct:   201 NRMLGLWAALGACFLSGFAGIYFEKILKGAEISVWMRNVQLSLLSIPFGLLTCFVNDGSR 260

Query:   303 IFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFA 362
             IF  GFF  Y  F+ +LVLL A GGLIVAVVVKYADNILKGFATSLAI+++CV  +Y+F 
Sbjct:   261 IFDQGFFKGYDLFVWYLVLLQAGGGLIVAVVVKYADNILKGFATSLAIIISCVASIYIFD 320

Query:   363 FVITFQFIVGAFFVMCSVFLY 383
             F +T QF  GA  V+ S+FLY
Sbjct:   321 FNLTLQFSFGAGLVIASIFLY 341

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=ISS;IDA;NAS

GO:0005463 "UDP-N-acetylgalactosamine transmembrane transporter activity" evidence=ISS;IDA

GO:0015785 "UDP-galactose transport" evidence=IDA;NAS

GO:0015789 "UDP-N-acetylgalactosamine transport" evidence=IDA

GO:0005456 "CMP-N-acetylneuraminate transmembrane transporter activity" evidence=IDA

GO:0005464 "UDP-xylose transmembrane transporter activity" evidence=IDA

GO:0005461 "UDP-glucuronic acid transmembrane transporter activity" evidence=IDA

GO:0015782 "CMP-N-acetylneuraminate transport" evidence=IDA

GO:0015757 "galactose transport" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IDA

WB|WBGene00005153 srf-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
 Identities = 141/336 (41%), Positives = 206/336 (61%)

Query:    66 VGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVV 125
             VG E +QS+  M KT  LI LTLQN+I +L +RY+R +  D +F+S+  V + EV+K  +
Sbjct:    30 VGRESSQSKGNM-KTAILIWLTLQNSIHTLLIRYSRAREVDAMFVSTVAVWLTEVIKCFI 88

Query:   126 CLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATS 185
             CL LV  +E     RFI+ +R   ++ P DTLKV +PA++Y++QNNL Y++AS+LDAAT 
Sbjct:    89 CLFLVAQEETPR--RFIHALRTQILEQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAATF 146

Query:   186 QVTYQXXXXXXXXXXXXXXXXXXXXXQWISLVILVVGVALVQLSSVVEKARPADFVENRM 245
              +T Q                     QW +L +L VGV+LVQL     KA+ +   E+  
Sbjct:   147 MITSQLKIFTAAIFTVIILRRSLNRTQWFALAVLFVGVSLVQLQGT--KAKESSG-ESPF 203

Query:   246 LGFAATILACLLSGLAGVYFEMILKGS-DVSIWMRNVQLSLLSLPCAACTCFISDWDKIF 304
             +GF A ++AC LSG AG+YFE ILKGS  VS+WMRNVQ+++ S+P +    ++ D   + 
Sbjct:   204 VGFVAVVVACCLSGFAGIYFEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTVN 263

Query:   305 QHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFV 364
             ++G  Y +   +   VL    GGL VAV +KYADNI K FATS+AI+L+ +  ++LF F+
Sbjct:   264 EYGLLYGFDSIVWLTVLWYGVGGLSVAVCIKYADNIAKNFATSVAIILSTIGSIFLFDFI 323

Query:   365 ITFQFIVGAFFVMCSVFLYSRTXXXXXXXXRAKAEV 400
              +F F++GA  V+ S+FLYS          R + E+
Sbjct:   324 PSFTFLLGASLVIFSIFLYSSHQSMVAALGRLRGEI 359

GO:0016020 "membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005462 "UDP-N-acetylglucosamine transmembrane transporter activity" evidence=IDA

GO:0015785 "UDP-galactose transport" evidence=IDA

GO:0015788 "UDP-N-acetylglucosamine transport" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IC

UNIPROTKB|Q93890 srf-3 "UDP-galactose/UDP-N-acetylglucosamine transporter srf-3" [Caenorhabditis elegans (taxid:6239)]

 Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
 Identities = 141/336 (41%), Positives = 206/336 (61%)

Query:    66 VGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVV 125
             VG E +QS+  M KT  LI LTLQN+I +L +RY+R +  D +F+S+  V + EV+K  +
Sbjct:    30 VGRESSQSKGNM-KTAILIWLTLQNSIHTLLIRYSRAREVDAMFVSTVAVWLTEVIKCFI 88

Query:   126 CLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATS 185
             CL LV  +E     RFI+ +R   ++ P DTLKV +PA++Y++QNNL Y++AS+LDAAT 
Sbjct:    89 CLFLVAQEETPR--RFIHALRTQILEQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAATF 146

Query:   186 QVTYQXXXXXXXXXXXXXXXXXXXXXQWISLVILVVGVALVQLSSVVEKARPADFVENRM 245
              +T Q                     QW +L +L VGV+LVQL     KA+ +   E+  
Sbjct:   147 MITSQLKIFTAAIFTVIILRRSLNRTQWFALAVLFVGVSLVQLQGT--KAKESSG-ESPF 203

Query:   246 LGFAATILACLLSGLAGVYFEMILKGS-DVSIWMRNVQLSLLSLPCAACTCFISDWDKIF 304
             +GF A ++AC LSG AG+YFE ILKGS  VS+WMRNVQ+++ S+P +    ++ D   + 
Sbjct:   204 VGFVAVVVACCLSGFAGIYFEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTVN 263

Query:   305 QHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFV 364
             ++G  Y +   +   VL    GGL VAV +KYADNI K FATS+AI+L+ +  ++LF F+
Sbjct:   264 EYGLLYGFDSIVWLTVLWYGVGGLSVAVCIKYADNIAKNFATSVAIILSTIGSIFLFDFI 323

Query:   365 ITFQFIVGAFFVMCSVFLYSRTXXXXXXXXRAKAEV 400
              +F F++GA  V+ S+FLYS          R + E+
Sbjct:   324 PSFTFLLGASLVIFSIFLYSSHQSMVAALGRLRGEI 359

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0030173 "integral to Golgi membrane" evidence=IDA

GO:0015788 "UDP-N-acetylglucosamine transport" evidence=IDA

GO:0005462 "UDP-N-acetylglucosamine transmembrane transporter activity" evidence=IDA

GO:0015785 "UDP-galactose transport" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

UNIPROTKB|G5EFD3 srf-3 "Protein SRF-3, isoform b" [Caenorhabditis elegans (taxid:6239)]

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 135/324 (41%), Positives = 199/324 (61%)

Query:    78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFH 137
             +KT  LI LTLQN+I +L +RY+R +  D +F+S+  V + EV+K  +CL LV  +E   
Sbjct:     1 MKTAILIWLTLQNSIHTLLIRYSRAREVDAMFVSTVAVWLTEVIKCFICLFLVAQEETPR 60

Query:   138 VGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQXXXXXXX 197
               RFI+ +R   ++ P DTLKV +PA++Y++QNNL Y++AS+LDAAT  +T Q       
Sbjct:    61 --RFIHALRTQILEQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAATFMITSQLKIFTAA 118

Query:   198 XXXXXXXXXXXXXXQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLL 257
                           QW +L +L VGV+LVQL     KA+ +   E+  +GF A ++AC L
Sbjct:   119 IFTVIILRRSLNRTQWFALAVLFVGVSLVQLQGT--KAKESSG-ESPFVGFVAVVVACCL 175

Query:   258 SGLAGVYFEMILKGS-DVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFI 316
             SG AG+YFE ILKGS  VS+WMRNVQ+++ S+P +    ++ D   + ++G  Y +   +
Sbjct:   176 SGFAGIYFEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTVNEYGLLYGFDSIV 235

Query:   317 VFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFV 376
                VL    GGL VAV +KYADNI K FATS+AI+L+ +  ++LF F+ +F F++GA  V
Sbjct:   236 WLTVLWYGVGGLSVAVCIKYADNIAKNFATSVAIILSTIGSIFLFDFIPSFTFLLGASLV 295

Query:   377 MCSVFLYSRTXXXXXXXXRAKAEV 400
             + S+FLYS          R + E+
Sbjct:   296 IFSIFLYSSHQSMVAALGRLRGEI 319

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

ZFIN|ZDB-GENE-070424-281 si:dkey-83k24.4 "si:dkey-83k24.4" [Danio rerio (taxid:7955)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 131/309 (42%), Positives = 185/309 (59%)

Query:    78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFH 137
             LK TSL  L +QNA + LS+RY R    D  F +++ V+MAEV+K++ CL ++   +  +
Sbjct:    32 LKYTSLAILVIQNASLILSIRYVRTLPGDH-FYTTSAVVMAEVLKVITCLFIILIQKRGN 90

Query:   138 VGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQXXXXXXX 197
             V  F++L+    +    DTLK+ VP+L+Y +QNNL Y++ SNL AAT QVTYQ       
Sbjct:    91 VKSFVSLLYDSIVIQYWDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTA 150

Query:   198 XXXXXXXXXXXXXXQWISLVILVVGVALVQLSSVVEKARPADFVENR--MLGFAATILAC 255
                           QWISLV+L  GVA+VQ+     K + A    N+    G  + I++C
Sbjct:   151 LFSVLMLRKSLSRIQWISLVLLFAGVAIVQVEQESGKQKEAVTAANQNYFKGLLSVIISC 210

Query:   256 LLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWF 315
             L SG AGVYFE ILKGS  S+WMRN+QL +          + +D   I + GF + YT  
Sbjct:   211 LSSGFAGVYFEKILKGSSASVWMRNIQLGIFGTVLGLLGMWWNDGAAIAEKGFLFGYTPM 270

Query:   316 IVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFF 375
             +  ++   A GGL+VAVVVKYADNILKGFATS +I+++ +  VYLF F +   F +GA  
Sbjct:   271 VWGVIFNQAFGGLLVAVVVKYADNILKGFATSFSIIVSTITSVYLFGFHVDLVFTLGAGL 330

Query:   376 VMCSVFLYS 384
             V+ +V++YS
Sbjct:   331 VIGAVYMYS 339

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-030616-62 slc35a2 "solute carrier family 35 (UDP-galactose transporter), member 2" [Danio rerio (taxid:7955)]

 Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
 Identities = 131/309 (42%), Positives = 184/309 (59%)

Query:    78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFH 137
             LK TSL  L +QNA + LS+RY R    D  F +++ V+MAEV+K++ CL ++   +   
Sbjct:     5 LKYTSLAILVIQNASLILSIRYVRTLPGDH-FYTTSAVVMAEVLKVITCLFIILIQKRGS 63

Query:   138 VGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQXXXXXXX 197
             V  F++L+    +    DTLK+ VP+L+Y +QNNL Y++ SNL AAT QVTYQ       
Sbjct:    64 VKSFVSLLYDSIVIQYWDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTA 123

Query:   198 XXXXXXXXXXXXXXQWISLVILVVGVALVQLSSVVEKARPADFVENR--MLGFAATILAC 255
                           QWISLV+L  GVA+VQ+     K + A    N+    G  + I++C
Sbjct:   124 LFSVLMLRKSLSRIQWISLVLLFAGVAIVQVEQESGKQKEAVTAANQNYFKGLLSVIISC 183

Query:   256 LLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWF 315
             L SG AGVYFE ILKGS  S+WMRN+QL +          + +D   I + GF + YT  
Sbjct:   184 LSSGFAGVYFEKILKGSSASVWMRNIQLGIFGTVLGLLGMWWNDGAAIAEKGFLFGYTPM 243

Query:   316 IVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFF 375
             +  ++   A GGL+VAVVVKYADNILKGFATS +I+++ +  VYLF F +   F +GA  
Sbjct:   244 VWGVIFNQAFGGLLVAVVVKYADNILKGFATSFSIIVSTITSVYLFGFHVDLVFTLGAGL 303

Query:   376 VMCSVFLYS 384
             V+ +V++YS
Sbjct:   304 VIGAVYMYS 312

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|Q58DA6 SLC35A2 "UDP-galactose translocator" [Bos taurus (taxid:9913)]

 Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
 Identities = 143/328 (43%), Positives = 190/328 (57%)

Query:    58 ATNGEVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLM 117
             A +    E G   A  R   LK  SL  L +QNA + LS+RYAR    D  F ++T V+M
Sbjct:    17 AVSAGALEPGTSSAAHRR--LKYISLAVLVVQNASLILSIRYARTLPGDRFF-ATTAVVM 73

Query:   118 AEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISA 177
             AEV+K + CL L+FA +  +V   +  +    +   +DTLK+ VP+L+Y +QNNL YI+ 
Sbjct:    74 AEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYMDTLKLAVPSLIYTLQNNLQYIAI 133

Query:   178 SNLDAATSQVTYQXXXXXXXXXXXXXXXXXXXXXQWISLVILVVGVALVQLSSVVEKA-R 236
             SNL AAT QVTYQ                     QW SL++L  GVA+VQ         R
Sbjct:   134 SNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPR 193

Query:   237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCF 296
             P D  +N  +G AA + +CL SG AGVYFE ILKGS  S+W+RN+QL L          +
Sbjct:   194 PLD--QNPGVGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLW 251

Query:   297 ISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVF 356
              ++   +   GFF+ YT  +  +VL  A GGL+VAVVVKYADNILKGFATSL+IVL+ V 
Sbjct:   252 WAEGTAVTHRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVA 311

Query:   357 QVYLFAFVITFQFIVGAFFVMCSVFLYS 384
              + LF F +   F +GA  V+ +V+LYS
Sbjct:   312 SIRLFGFHVDPLFALGAGLVIGAVYLYS 339

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

UNIPROTKB|F1MZI7 SLC35A2 "UDP-galactose translocator" [Bos taurus (taxid:9913)]

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 142/328 (43%), Positives = 190/328 (57%)

Query:    58 ATNGEVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLM 117
             A +    E G   A  R   LK  SL  L +QNA + LS+RYAR    D  F ++T V+M
Sbjct:    17 AVSAGALEPGTSSAAHRR--LKYISLAVLVVQNASLILSIRYARTLPGDRFF-ATTAVVM 73

Query:   118 AEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISA 177
             AEV+K + CL L+FA +  +V   +  +    +   +DTLK+ VP+L+Y +QNNL Y++ 
Sbjct:    74 AEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYMDTLKLAVPSLIYTLQNNLQYVAI 133

Query:   178 SNLDAATSQVTYQXXXXXXXXXXXXXXXXXXXXXQWISLVILVVGVALVQLSSVVEKA-R 236
             SNL AAT QVTYQ                     QW SL++L  GVA+VQ         R
Sbjct:   134 SNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPR 193

Query:   237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCF 296
             P D  +N  +G AA + +CL SG AGVYFE ILKGS  S+W+RN+QL L          +
Sbjct:   194 PLD--QNPGVGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLW 251

Query:   297 ISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVF 356
              ++   +   GFF+ YT  +  +VL  A GGL+VAVVVKYADNILKGFATSL+IVL+ V 
Sbjct:   252 WAEGTAVAHRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVA 311

Query:   357 QVYLFAFVITFQFIVGAFFVMCSVFLYS 384
              + LF F +   F +GA  V+ +V+LYS
Sbjct:   312 SIRLFGFHVDPLFALGAGLVIGAVYLYS 339

GO:0016021 "integral to membrane" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

UNIPROTKB|Q8SPM1 ugt "Putative UDP-galactose translocator" [Bos taurus (taxid:9913)]

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 142/328 (43%), Positives = 190/328 (57%)

Query:    58 ATNGEVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLM 117
             A +    E G   A  R   LK  SL  L +QNA + LS+RYAR    D  F ++T V+M
Sbjct:    17 AVSAGALEPGTSSAAHRR--LKYISLAVLVVQNASLILSIRYARTLPGDRFF-ATTAVVM 73

Query:   118 AEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISA 177
             AEV+K + CL L+FA +  +V   +  +    +   +DTLK+ VP+L+Y +QNNL Y++ 
Sbjct:    74 AEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYMDTLKLAVPSLIYTLQNNLQYVAI 133

Query:   178 SNLDAATSQVTYQXXXXXXXXXXXXXXXXXXXXXQWISLVILVVGVALVQLSSVVEKA-R 236
             SNL AAT QVTYQ                     QW SL++L  GVA+VQ         R
Sbjct:   134 SNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPR 193

Query:   237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCF 296
             P D  +N  +G AA + +CL SG AGVYFE ILKGS  S+W+RN+QL L          +
Sbjct:   194 PLD--QNPGVGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLW 251

Query:   297 ISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVF 356
              ++   +   GFF+ YT  +  +VL  A GGL+VAVVVKYADNILKGFATSL+IVL+ V 
Sbjct:   252 WAEGTAVAHRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVA 311

Query:   357 QVYLFAFVITFQFIVGAFFVMCSVFLYS 384
              + LF F +   F +GA  V+ +V+LYS
Sbjct:   312 SIRLFGFHVDPLFALGAGLVIGAVYLYS 339

GO:0005634 "nucleus" evidence=IEA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

RGD|2293497 Slc35a2 "solute carrier family 35 (UDP-galactose transporter), member A2" [Rattus norvegicus (taxid:10116)]

 Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
 Identities = 142/328 (43%), Positives = 190/328 (57%)

Query:    58 ATNGEVREVGPEMAQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLM 117
             A +    E G   A  R   LK  SL  L +QNA + LS+RYAR    D  F ++T V+M
Sbjct:    17 AVSAGALEPGSATAAHRR--LKYISLAVLVVQNASLILSIRYARTLPGDRFF-ATTAVVM 73

Query:   118 AEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISA 177
             AEV+K + CL L+FA +  +V   +  +    +   +DTLK+ VP+L+Y +QNNL Y++ 
Sbjct:    74 AEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAI 133

Query:   178 SNLDAATSQVTYQXXXXXXXXXXXXXXXXXXXXXQWISLVILVVGVALVQLSSVVEKA-R 236
             SNL AAT QVTYQ                     QW SL++L  GVA+VQ         R
Sbjct:   134 SNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGSGPR 193

Query:   237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCF 296
             P D  +N  +G AA + +CL SG AGVYFE ILKGS  S+W+RN+QL L          +
Sbjct:   194 PLD--QNPGVGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLW 251

Query:   297 ISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVF 356
              ++   +   GFF+ YT  +  +VL  A GGL+VAVVVKYADNILKGFATSL+IVL+ V 
Sbjct:   252 WAEGTAVASQGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVA 311

Query:   357 QVYLFAFVITFQFIVGAFFVMCSVFLYS 384
              + LF F +   F +GA  V+ +V+LYS
Sbjct:   312 SIRLFGFHLDPLFALGAGLVIGAVYLYS 339

GO:0000139 "Golgi membrane" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006810 "transport" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0008643 "carbohydrate transport" evidence=ISO

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P78381	S35A2_HUMAN	No assigned EC number	0.4685	0.785	0.7929	yes	N/A
Q8WMS0	S35A2_CANFA	No assigned EC number	0.4654	0.785	0.7909	yes	N/A
Q93890	SRF3_CAEEL	No assigned EC number	0.4451	0.825	0.8967	yes	N/A
Q58DA6	S35A2_BOVIN	No assigned EC number	0.4735	0.7875	0.8015	yes	N/A
Q6AXR5	S35A3_RAT	No assigned EC number	0.4254	0.7975	0.9785	yes	N/A
Q9R0M8	S35A2_MOUSE	No assigned EC number	0.4704	0.7875	0.8076	yes	N/A
P87041	GMS1_SCHPO	No assigned EC number	0.4281	0.8	0.9065	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	400
pfam04142	238	pfam04142, Nuc_sug_transp, Nucleotide-sugar transp	1e-102
TIGR00803	222	TIGR00803, nst, UDP-galactose transporter	1e-46
pfam08449	303	pfam08449, UAA, UAA transporter family	2e-06
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	8e-06
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	6e-04
pfam00892	126	pfam00892, EamA, EamA-like transporter family	0.004

>gnl|CDD|217924 pfam04142, Nuc_sug_transp, Nucleotide-sugar transporter

 Score =  302 bits (775), Expect = e-102
 Identities = 129/238 (54%), Positives = 164/238 (68%), Gaps = 1/238 (0%)

Query: 140 RFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIF 199
           +F   +      NP DTLKV VPA +Y +QNNLLY++ SNLDAAT QVTYQLKILTTA+F
Sbjct: 1   KFSRELHKAIFNNPSDTLKVAVPAFIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALF 60

Query: 200 AIILLKKKISKIQWISLVILVVGVALVQLSSV-VEKARPADFVENRMLGFAATILACLLS 258
           ++++L +K+S  QW SL++L +GVA+VQL     E        +N  LG +A + AC  S
Sbjct: 61  SVLMLGRKLSWYQWASLLLLFLGVAIVQLDQKSSETNSKRGAEQNPGLGLSAVLAACFTS 120

Query: 259 GLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVF 318
           G AGVYFE ILKGS+ SIW+RN+QL    +  A  TC++ D   I + GFF+ YT F+  
Sbjct: 121 GFAGVYFEKILKGSNTSIWIRNIQLYFFGIFFALLTCWLYDGSAISEKGFFFGYTAFVWA 180

Query: 319 LVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFV 376
           +VLL A GGL+VAVVVKYADNILKGFATSLAI+L+ V  V LF F  T  F++GA  V
Sbjct: 181 VVLLQAVGGLVVAVVVKYADNILKGFATSLAIILSTVASVLLFDFRPTLTFLLGAILV 238

This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid, SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc. Length = 238

>gnl|CDD|129885 TIGR00803, nst, UDP-galactose transporter

 Score =  159 bits (403), Expect = 1e-46
 Identities = 94/227 (41%), Positives = 123/227 (54%), Gaps = 6/227 (2%)

Query: 158 KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLV 217
           K+ VP  +   QNNL+ I+  NL AA  QVT QLKIL+TA+  +  L   +   QW SL 
Sbjct: 1   KLSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLK 59

Query: 218 ILVVGVALVQLSSVVEKA-RPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSI 276
           +L +GVA+VQ+     K     + V    +G +A + A L SG AGVYFE ILK  D   
Sbjct: 60  LLKLGVAIVQMVQSSAKTLMFGNPV----VGLSAVLSALLSSGFAGVYFEKILKDGDTMF 115

Query: 277 WMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKY 336
           W RN+QL L  L         SD   I   GFF  Y   +  + LLN  GGL +  VV+Y
Sbjct: 116 WSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLNVGGGLCIGGVVRY 175

Query: 337 ADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLY 383
           ADN  K F T+L+I+L+ +  V LF   I+  F +GA  V  + FLY
Sbjct: 176 ADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222

The 10-12 TMS Nucleotide Sugar Transporters (TC 2.A.7.10)Nucleotide-sugar transporters (NSTs) are found in the Golgi apparatus and the endoplasmic reticulum of eukaryotic cells. Members of the family have been sequenced from yeast, protozoans and animals. Animals such as C. elegans possess many of these transporters. Humans have at least two closely related isoforms of the UDP-galactose:UMP exchange transporter.NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids. Length = 222

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 43/209 (20%), Positives = 73/209 (34%), Gaps = 28/209 (13%)

Query: 192 KILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAAT 251
           K++   I  I++  K+ S +Q++S +++ +GV +  L+S  +         +  +G A  
Sbjct: 100 KLIPVMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALL 159

Query: 252 ILACLLSGLAGVYFEMILKGSDVSIW--MRNVQL-----SLLSLPCAACTCFISDWDKIF 304
             A L+  L G   E + K         M    L      LL L         S      
Sbjct: 160 FGALLMDALTGNTQEKLYKKYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCL 219

Query: 305 QHGFFYNYTWFIVF---------LVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACV 355
           +H     Y                 L++  G L V +V      + K  +         +
Sbjct: 220 RHPSVLFYLLLNSLTQYVGQFFVFYLISEFGALTVTLVT----TLRKFVSL--------L 267

Query: 356 FQVYLFAFVITFQFIVGAFFVMCSVFLYS 384
             V LF   +T Q  +G   V   +FLY+
Sbjct: 268 LSVLLFGNPLTLQQWLGTLLVFLGIFLYA 296

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 46.8 bits (111), Expect = 8e-06
 Identities = 42/229 (18%), Positives = 84/229 (36%), Gaps = 14/229 (6%)

Query: 163 ALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFA-IILLKKKISKIQWISLVILVV 221
            L   +   LL+++     A+ + +   L  L TA+ A ++LL +++S +Q + +++ + 
Sbjct: 77  LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALA 136

Query: 222 GVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNV 281
           GV L+ L                +LG    + A LL  L     + + +   V++    +
Sbjct: 137 GVLLILLGGGGG-------GILSLLGLLLALAAALLWALYTALVKRLSRLGPVTL-ALLL 188

Query: 282 QLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNIL 341
           QL L  L              + +          +   V       L+    ++     L
Sbjct: 189 QLLLALLLLLLFFLSGFGAPILSRAWL-----LLLYLGVFSTGLAYLLWYYALRLLGASL 243

Query: 342 KGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSK 390
               + L  V A +  V L    ++   ++GA  V+  V L S     +
Sbjct: 244 VALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRARRR 292

Length = 292

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 26/143 (18%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 88  LQNAIVSLSMRYARMKNKDEL-FISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVR 146
           L+  +    ++  +    + L  +     +       +V L  +   EGF +G+FI    
Sbjct: 14  LRLILSQKLLKKKKGTKLNVLELLYYLSPVAF-----IVLLPGLLFSEGFKLGKFIL-KF 67

Query: 147 AHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQ----LKILTTAIFAII 202
              ++     L + +  +L  + N    +SA  L   TS +T      +K +   + ++I
Sbjct: 68  FGDLKTSRYVLLLLLSGVLAFLYN----LSAFGLLGRTSPLTSSVAGTVKRVVVIVLSVI 123

Query: 203 LLKKKISKIQWISLVILVVGVAL 225
           +    ++ +  + L I ++GV L
Sbjct: 124 IFGDPVTFLNILGLAIAILGVVL 146

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 14/60 (23%), Positives = 34/60 (56%)

Query: 167 VIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV 226
            +   L + +   + A+ + V   L  + T I +++LL +K++  Q + +V++++GV L+
Sbjct: 65  ALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLGVLLI 124

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	400
KOG2234|consensus	345		100.0
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	100.0
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.94
PLN00411	358	nodulin MtN21 family protein; Provisional	99.93
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.92
PRK11272	292	putative DMT superfamily transporter inner membran	99.92
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.92
PRK15430	296	putative chloramphenical resistance permease RarD;	99.92
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.91
KOG3912|consensus	372		99.9
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.9
PRK11689	295	aromatic amino acid exporter; Provisional	99.9
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.89
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.89
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.89
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.83
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.82
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.81
KOG4510|consensus	346		99.78
KOG1581|consensus	327		99.77
KOG1580|consensus	337		99.77
COG2962	293	RarD Predicted permeases [General function predict	99.66
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.6
KOG1441|consensus	316		99.58
KOG1443|consensus	349		99.5
KOG2765|consensus	416		99.46
KOG1582|consensus	367		99.46
KOG1583|consensus	330		99.45
KOG1444|consensus	314		99.44
KOG2766|consensus	336		99.31
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.3
COG2510	140	Predicted membrane protein [Function unknown]	99.04
KOG1442|consensus	347		99.02
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.02
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.01
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.01
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.95
KOG4314|consensus	290		98.86
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.7
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.55
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.54
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.51
COG2510	140	Predicted membrane protein [Function unknown]	98.45
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.37
PRK13499	345	rhamnose-proton symporter; Provisional	98.34
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.3
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.22
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.21
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.17
PRK11689	295	aromatic amino acid exporter; Provisional	98.17
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.13
PLN00411	358	nodulin MtN21 family protein; Provisional	98.1
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.09
PRK11272	292	putative DMT superfamily transporter inner membran	98.08
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.95
PRK15430	296	putative chloramphenical resistance permease RarD;	97.94
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.8
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.8
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.79
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.74
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.63
PRK11431	105	multidrug efflux system protein; Provisional	97.63
COG2076	106	EmrE Membrane transporters of cations and cationic	97.59
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.58
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.55
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.54
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.5
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.37
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.36
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.3
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.27
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.27
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.24
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.95
KOG2922|consensus	335		96.87
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.82
PRK11431	105	multidrug efflux system protein; Provisional	96.72
COG2076	106	EmrE Membrane transporters of cations and cationic	96.7
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.65
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.63
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.51
PRK13499	345	rhamnose-proton symporter; Provisional	96.05
KOG1441|consensus	316		96.04
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.94
COG2962	293	RarD Predicted permeases [General function predict	95.8
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.75
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.47
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.33
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	95.08
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.06
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.64
KOG1581|consensus	327		94.28
KOG1580|consensus	337		94.24
KOG2922|consensus	335		92.7
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	92.54
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	92.06
KOG1444|consensus	314		91.99
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	91.55
KOG4510|consensus	346		91.49
KOG2765|consensus	416		91.01
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	90.33
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	88.5
KOG1583|consensus	330		87.19
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	87.07
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	86.51
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	86.31
COG3169	116	Uncharacterized protein conserved in bacteria [Fun	81.52

>KOG2234|consensus

Probab=100.00  E-value=3.8e-51  Score=390.64  Aligned_cols=311  Identities=49%  Similarity=0.823  Sum_probs=284.3

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccch
Q psy11593         78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTL  157 (400)
Q Consensus        78 ~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~  157 (400)
                      +++++++++++++++..+.+||++.++ +++|.++++|++.|++|+++|+.+.+++.++..++..+.+.+++..+|++..
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~-~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~l   93 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTRE-KPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETL   93 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCC-CCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHH
Confidence            999999999999999999999999875 8899999999999999999999999988642113334456677777888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccC-C
Q psy11593        158 KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA-R  236 (400)
Q Consensus       158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~-~  236 (400)
                      +..+||++|++||++.|+++.++|++++++.+|+++++||++++++|+||++++||.+++++++|+.++|.+...+.+ +
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~  173 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK  173 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999954332221 1


Q ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHH
Q psy11593        237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFI  316 (400)
Q Consensus       237 ~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~  316 (400)
                      +..+..+...|..+++.+|++||++++|+||++|+.+.+.|+||+|++++|++++++.++..|++++...++|+||+..+
T Consensus       174 ~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~v  253 (345)
T KOG2234|consen  174 SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIV  253 (345)
T ss_pred             CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHH
Confidence            23456788999999999999999999999999999999999999999999999999999888998887788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593        317 VFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS  389 (400)
Q Consensus       317 ~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~  389 (400)
                      |++++.+++||+++++++||+|++.|.++++++++++.+.|+.+||.+||..+++|+.+|+.++++|+..|.+
T Consensus       254 w~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  254 WLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             HHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999977665

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=100.00  E-value=2.4e-39  Score=304.83  Aligned_cols=233  Identities=47%  Similarity=0.781  Sum_probs=212.9

Q ss_pred             HhhhhcccCcccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhh
Q psy11593        144 LVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGV  223 (400)
Q Consensus       144 ~l~~~~~~~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GV  223 (400)
                      +++++...++|+.+++++||++|+++|++.|++++++|++++|+++|+++++||++++++||||++++||+|+++.++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv   84 (244)
T PF04142_consen    5 SLKDEVWKSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGV   84 (244)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHH
Confidence            45566667789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             heeecccccccCC--CC-----cccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHH
Q psy11593        224 ALVQLSSVVEKAR--PA-----DFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCF  296 (400)
Q Consensus       224 viv~~~~~~~~~~--~~-----~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~  296 (400)
                      ++++.++....+.  +.     ....+...|+++++++++++|+++||.||++|+.+.++|.+|+|++++|++++++...
T Consensus        85 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~  164 (244)
T PF04142_consen   85 VLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALL  164 (244)
T ss_pred             heeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHh
Confidence            9998876543111  11     1234568999999999999999999999999999899999999999999999998877


Q ss_pred             hhcCchhhhccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHH
Q psy11593        297 ISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFV  376 (400)
Q Consensus       297 ~~~~~~i~~~~~~~~~~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lV  376 (400)
                      +.+++++.+.++|+||+.++|..++.++++|+++++++||+|++.|++++.++++++.++++++||.++|..+++|.++|
T Consensus       165 ~~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  165 LSDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cccccccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            78888888889999999999999999999999999999999999999999999999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.94  E-value=4.6e-24  Score=208.20  Aligned_cols=230  Identities=18%  Similarity=0.211  Sum_probs=185.2

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccc
Q psy11593        154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVE  233 (400)
Q Consensus       154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~  233 (400)
                      +++++|.+.|++++.+|.+...|++|++.+.++++.++.+++++++++++||+|+++.||+|+++.++|++++...|...
T Consensus        77 ~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~  156 (334)
T PF06027_consen   77 RPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLS  156 (334)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccc
Confidence            56788999999999999999999999999999999999999999999999999999999999999999999988776543


Q ss_pred             cCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccch
Q psy11593        234 KARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYT  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~  313 (400)
                      ++ ++....+...|++++++||+++|+++|+.|++.|+.+.  .....+++++|.+++.+...+.+.+.++..    .|+
T Consensus       157 ~~-~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~--~~~lg~~Glfg~ii~~iq~~ile~~~i~~~----~w~  229 (334)
T PF06027_consen  157 GS-DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPR--VEFLGMLGLFGFIISGIQLAILERSGIESI----HWT  229 (334)
T ss_pred             cc-cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCH--HHHHHHHHHHHHHHHHHHHHheehhhhhcc----CCC
Confidence            21 11234577899999999999999999999999987653  333456778888887776655555544321    123


Q ss_pred             HHHHHHHH----HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593        314 WFIVFLVL----LNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS  389 (400)
Q Consensus       314 ~~~~l~i~----~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~  389 (400)
                      +..+...+    ...+...++..+++..++..-+....++.+++.++++++||+++++..++|.++|++|..+|+..+++
T Consensus       230 ~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  230 SQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            33222222    12223345567789999988888888899999999999999999999999999999999999876655


Q ss_pred             C
Q psy11593        390 K  390 (400)
Q Consensus       390 ~  390 (400)
                      .
T Consensus       310 ~  310 (334)
T PF06027_consen  310 E  310 (334)
T ss_pred             c
Confidence            4

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.93  E-value=1.7e-23  Score=207.68  Aligned_cols=294  Identities=11%  Similarity=0.091  Sum_probs=201.6

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcC-CchhhhHHHhhhhcccCcccc
Q psy11593         78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEG-FHVGRFINLVRAHTIQNPLDT  156 (400)
Q Consensus        78 ~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~  156 (400)
                      ..++.+++.=+.++.+.++.|.+-+.+    .++...++.|..+..++.+++.+..++ +..++          .+++++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G----~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~----------~~~~~~   78 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSKG----LNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPP----------LSVSIL   78 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHCC----CCccHHHHHHHHHHHHHHHHHHHHHHHhcccCc----------chHHHH
Confidence            346677777777888889999987542    355557788877776665555443322 11110          012445


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHH------hcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593        157 LKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIIL------LKKKISKIQWISLVILVVGVALVQLSS  230 (400)
Q Consensus       157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~------L~erls~~qwlal~l~~~GVviv~~~~  230 (400)
                      ..+++.+++.++.+.+.++|+++++++.++++.++.|++++++++++      +|||++++||+|++++++|++++...+
T Consensus        79 ~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~  158 (358)
T PLN00411         79 SKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYH  158 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence            55677777666677899999999999999999999999999999999      699999999999999999998875432


Q ss_pred             cccc---C----------C--CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHH
Q psy11593        231 VVEK---A----------R--PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTC  295 (400)
Q Consensus       231 ~~~~---~----------~--~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~  295 (400)
                      ....   +          .  ......+...|++++++++++||++.++.++..++++........+..+.+..+.++..
T Consensus       159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l  238 (358)
T PLN00411        159 GPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGL  238 (358)
T ss_pred             CcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHH
Confidence            2100   0          0  00111223569999999999999999999998877654322222233333333333333


Q ss_pred             HhhcCchhhhccccccchHHHHHHHHHH----HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHH
Q psy11593        296 FISDWDKIFQHGFFYNYTWFIVFLVLLN----ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIV  371 (400)
Q Consensus       296 ~~~~~~~i~~~~~~~~~~~~~~l~i~~~----al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~li  371 (400)
                      ..++.+ ...  ....++...+. +++.    +++..+..+.+++.++...+...++.|++++++|++++||++++.+++
T Consensus       239 ~~~~~~-~~~--~~~~~~~~~~~-i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~i  314 (358)
T PLN00411        239 VVEKNN-PSV--WIIHFDITLIT-IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLI  314 (358)
T ss_pred             HHccCC-ccc--ceeccchHHHH-HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHH
Confidence            222111 110  01112222111 2222    234444556789999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCCC
Q psy11593        372 GAFFVMCSVFLYSRTPSS  389 (400)
Q Consensus       372 G~~lVi~gv~ly~~~~~~  389 (400)
                      |+++|+.|+++..+.+++
T Consensus       315 G~~LIl~Gv~l~~~~~~~  332 (358)
T PLN00411        315 GGILITLGFYAVMWGKAN  332 (358)
T ss_pred             HHHHHHHHHHHHHhhhhh
Confidence            999999999998765443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.92  E-value=5.5e-23  Score=200.08  Aligned_cols=280  Identities=17%  Similarity=0.207  Sum_probs=188.0

Q ss_pred             HhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHHHH
Q psy11593         89 QNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVI  168 (400)
Q Consensus        89 ~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~~~  168 (400)
                      ...+..+.-|+.-+.   .+ .|....+.+.+...+.+... ++...++.++          .+++++......|++.++
T Consensus        13 ~~~~~~~~NK~~l~~---~~-~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~g~~~~~   77 (302)
T TIGR00817        13 LNVYFNIYNKKLLNV---FP-YPYFKTLISLAVGSLYCLLS-WSSGLPKRLK----------ISSALLKLLLPVAIVHTI   77 (302)
T ss_pred             HHHHHHHHHHHHHhh---CC-hhHHHHHHHHHHHHHHHHHH-HHhCCCCCCC----------CCHHHHHHHHHHHHHHHH
Confidence            334445667776642   11 35556677666654443333 2211111111          123455567778888889


Q ss_pred             HHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHH
Q psy11593        169 QNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGF  248 (400)
Q Consensus       169 ~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~  248 (400)
                      +..+.++++++++++.++++.++.|+++++++++++|||+++++|.+++++++|+++...++.          .....|+
T Consensus        78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~----------~~~~~G~  147 (302)
T TIGR00817        78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTEL----------SFNWAGF  147 (302)
T ss_pred             HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcc----------cccHHHH
Confidence            999999999999999999999999999999999999999999999999999999987632211          2345799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccc---cch-HHHHHHHHHHH
Q psy11593        249 AATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFY---NYT-WFIVFLVLLNA  324 (400)
Q Consensus       249 l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~---~~~-~~~~l~i~~~a  324 (400)
                      +++++++++++++.++.||..++++.+...........+.++.++.....++......+..+   ..+ ...+...+..+
T Consensus       148 ~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (302)
T TIGR00817       148 LSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAA  227 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHH
Confidence            99999999999999999998873222222233333444555544444333322111100000   001 11222122222


Q ss_pred             HH-----HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCCCCC
Q psy11593        325 SG-----GLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSKPKP  393 (400)
Q Consensus       325 l~-----g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~~~~  393 (400)
                      ++     .......+++.++.+.+...++.+++++++|++++||++|..+++|+++++.|+++|++.+.++++|
T Consensus       228 ~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~~  301 (302)
T TIGR00817       228 MGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPKP  301 (302)
T ss_pred             HHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcCC
Confidence            11     1122346789999999999999999999999999999999999999999999999999766544443

specificities overlap.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.92  E-value=4.2e-22  Score=193.08  Aligned_cols=278  Identities=11%  Similarity=0.072  Sum_probs=196.0

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchh
Q psy11593         79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLK  158 (400)
Q Consensus        79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~  158 (400)
                      -.+.+++.++.|+++.+.+|+..+     +.+|.+.++.|.+...++.+++...+++ +..            .++++..
T Consensus         9 ~~~~~~~~~~iWg~~~~~~K~~~~-----~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~~~------------~~~~~~~   70 (292)
T PRK11272          9 LFGALFALYIIWGSTYLVIRIGVE-----SWPPLMMAGVRFLIAGILLLAFLLLRGH-PLP------------TLRQWLN   70 (292)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHHHHhCC-CCC------------cHHHHHH
Confidence            456677889999999999998764     3588999999998877665555444332 111            1123333


Q ss_pred             hHHHHHH-HHHHHHHHHHHh-hcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCC
Q psy11593        159 VGVPALL-YVIQNNLLYISA-SNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKAR  236 (400)
Q Consensus       159 ~~i~a~l-~~~~~~l~~~al-~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~  236 (400)
                      ....+.+ ...++.+.+++. ++++++..+++.++.|+++++++++ +|||++++||+|++++++|+.++..++..    
T Consensus        71 ~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~----  145 (292)
T PRK11272         71 AALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL----  145 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc----
Confidence            4555554 457788899999 9999999999999999999999986 69999999999999999999887543221    


Q ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHH
Q psy11593        237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFI  316 (400)
Q Consensus       237 ~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~  316 (400)
                           +....|+++.+++++++|+++++.||..+++  +......++...+.+.. +.....+.. .........+-...
T Consensus       146 -----~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~i~  216 (292)
T PRK11272        146 -----SGNPWGAILILIASASWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLL-IASLLSGER-LTALPTLSGFLALG  216 (292)
T ss_pred             -----ccchHHHHHHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHH-HHHHHcCCc-ccccCCHHHHHHHH
Confidence                 1335799999999999999999999865432  23333333333333322 222221111 00000001111222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593        317 VFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS  388 (400)
Q Consensus       317 ~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~  388 (400)
                      ++.++..+++..+..+.+|+.++...+...+++|+++.+++++++||++|..+++|+++|+.|+++.++.++
T Consensus       217 ~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        217 YLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            233334445555666778999999999999999999999999999999999999999999999988766544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.92  E-value=8.1e-22  Score=191.71  Aligned_cols=282  Identities=12%  Similarity=0.053  Sum_probs=189.1

Q ss_pred             HHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhH
Q psy11593         81 TSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVG  160 (400)
Q Consensus        81 l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  160 (400)
                      +..++.++.|+++.+.+|..-+     +.+|...+++|.++..++.+++..+ ++  .+             ++   ...
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~-----~~~p~~~~~~R~~~a~~~l~~~~~~-~~--~~-------------~~---~~~   62 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH-----NMPPLMLAGLRFMLVAFPAIFFVAR-PK--VP-------------LN---LLL   62 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHHhcC-CC--Cc-------------hH---HHH
Confidence            4566778999999999998764     3688999999887754333322211 11  00             01   122


Q ss_pred             HHHHH-HHHHHHHHHHHhhc-CChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCC
Q psy11593        161 VPALL-YVIQNNLLYISASN-LDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPA  238 (400)
Q Consensus       161 i~a~l-~~~~~~l~~~al~~-l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~  238 (400)
                      ..+++ ...+..+.|.++++ .|++.+.++.++.|+++++++++++|||++++||++++++++|+.++..++.+.     
T Consensus        63 ~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~-----  137 (299)
T PRK11453         63 GYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG-----  137 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC-----
Confidence            22332 34566677889987 799999999999999999999999999999999999999999999886543221     


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCch-HHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHH
Q psy11593        239 DFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVS-IWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIV  317 (400)
Q Consensus       239 ~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~-~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~  317 (400)
                        ......|++++++++++++++.++.||..++.+.. ...........+.+.........+++.... ..+..++...|
T Consensus       138 --~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  214 (299)
T PRK11453        138 --QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI-HSLVTIDMTTI  214 (299)
T ss_pred             --cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh-hhhccCCHHHH
Confidence              12235799999999999999999999976543221 111112212222221111111222221100 00112233333


Q ss_pred             HHHH-----HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCCCC
Q psy11593        318 FLVL-----LNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSKPK  392 (400)
Q Consensus       318 l~i~-----~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~~~  392 (400)
                      ..++     ..+++..+....+++.++...+...+++|+++.++|++++||+++..+++|+++|+.|+++..+..+.+.+
T Consensus       215 ~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~~~~~  294 (299)
T PRK11453        215 LSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLRWRKA  294 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchhhhcc
Confidence            3333     33444445555668888989999999999999999999999999999999999999999887665543433


Q ss_pred             CC
Q psy11593        393 PP  394 (400)
Q Consensus       393 ~~  394 (400)
                      ++
T Consensus       295 ~~  296 (299)
T PRK11453        295 VK  296 (299)
T ss_pred             cc
Confidence            33

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.92  E-value=6.5e-22  Score=192.15  Aligned_cols=277  Identities=10%  Similarity=0.089  Sum_probs=190.8

Q ss_pred             hHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCccc
Q psy11593         76 FMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLD  155 (400)
Q Consensus        76 ~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~  155 (400)
                      +..+++..++.++.|+.+.+.+|...      ++++.++++.|.++..++.+++....++  .++..    +.. .++++
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~k~~~------~~~~~~~~~~R~~~a~~~l~~~~~~~~~--~~~~~----~~~-~~~~~   72 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYFKLIY------YVPADEILTHRVIWSFFFMVVLMSICRQ--WSYLK----TLI-QTPQK   72 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHHHHcc--HHHHH----HHH-cCHHH
Confidence            34567788888899999999999853      2588999999999877655544433221  11110    100 12344


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccC
Q psy11593        156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA  235 (400)
Q Consensus       156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~  235 (400)
                      +......+++..+++.++|+|++++|++.++++.++.|+++++++++++|||++++||.+++++++|++++..++.+   
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~---  149 (296)
T PRK15430         73 IFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGS---  149 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCC---
Confidence            33345666778899999999999999999999999999999999999999999999999999999999988643211   


Q ss_pred             CCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHH
Q psy11593        236 RPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWF  315 (400)
Q Consensus       236 ~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~  315 (400)
                             ..    .+.+++++++|++.++.||..++........+.+...++.+....   ..+... ... .......+
T Consensus       150 -------~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~-~~~~~~~~  213 (296)
T PRK15430        150 -------LP----IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA---IADSST-SHM-GQNPMSLN  213 (296)
T ss_pred             -------cc----HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH---HccCCc-ccc-cCCcHHHH
Confidence                   11    346788999999999888864322222222222222222221111   111110 000 01111111


Q ss_pred             HHHH--HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593        316 IVFL--VLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS  384 (400)
Q Consensus       316 ~~l~--i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~  384 (400)
                      .+..  .+..+++..+....+++.++...+...+++|+++.++|++++||+++..+++|+++|+.|+.+..
T Consensus       214 ~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        214 LLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            1111  12344566777888999999999999999999999999999999999999999999988765443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.91  E-value=1e-21  Score=191.45  Aligned_cols=267  Identities=19%  Similarity=0.259  Sum_probs=201.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhh
Q psy11593        111 SSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQ  190 (400)
Q Consensus       111 ~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~  190 (400)
                      +..+.+++.+...+++.......++...             +...+..+.+.++++.+.+.+.+.|++++|.++.+++++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks   98 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFILLSLFKFPKS-------------RKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKS   98 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhccccCC-------------CcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhh
Confidence            5566777777777766665554431111             113345689999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy11593        191 LKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILK  270 (400)
Q Consensus       191 ~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk  270 (400)
                      ++|+++++++++++|||++++||+++++.++|+++....+..++++++........|+++++++.++.|+.++++||+++
T Consensus        99 ~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~  178 (303)
T PF08449_consen   99 SKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFK  178 (303)
T ss_pred             hHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999987765433222222222334999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHhHHHHHHHHHHhh-cCchhhhccccccchHHHH---HHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q psy11593        271 GSDVSIWMRNVQLSLLSLPCAACTCFIS-DWDKIFQHGFFYNYTWFIV---FLVLLNASGGLIVAVVVKYADNILKGFAT  346 (400)
Q Consensus       271 ~~~~~~~~~~~~l~~~g~~~~l~~~~~~-~~~~i~~~~~~~~~~~~~~---l~i~~~al~g~~~~~~~k~~~ai~~~~~~  346 (400)
                      +++.+.+........++.+..++..... .++......+...++...+   +..+.++++...+....+..++...+..+
T Consensus       179 ~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~  258 (303)
T PF08449_consen  179 KYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVT  258 (303)
T ss_pred             HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHH
Confidence            8876666555556677777665554431 1221111112222222111   22234556666677788999999999999


Q ss_pred             HHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCC
Q psy11593        347 SLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSK  390 (400)
Q Consensus       347 ~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~  390 (400)
                      +++.++++++|+++||+++++.+|+|.++++.|+.+|.+.++++
T Consensus       259 t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  259 TLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999998877664

; GO: 0055085 transmembrane transport

>KOG3912|consensus

Probab=99.90  E-value=4e-22  Score=184.15  Aligned_cols=305  Identities=17%  Similarity=0.206  Sum_probs=216.3

Q ss_pred             HHHHHHHHHHhhHHHHHHHHcccc--C--C--CCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCc
Q psy11593         80 TTSLITLTLQNAIVSLSMRYARMK--N--K--DELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNP  153 (400)
Q Consensus        80 ~l~l~ll~~~~~~~~l~~k~s~~~--~--~--~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~  153 (400)
                      .++-+++++..+.++++.||+.+.  +  +  ++++..+..+|+.|+.++.+-..+-.+..++........+-.+. .+|
T Consensus         5 v~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~-~~p   83 (372)
T KOG3912|consen    5 VFLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQD-SSP   83 (372)
T ss_pred             hhhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccc-cCC
Confidence            445566778889999999999764  1  2  46788999999999998876555544443322221111111111 124


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccc
Q psy11593        154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVE  233 (400)
Q Consensus       154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~  233 (400)
                      -+...+..|++|+..+..+.|.|+.+++++.+|+++...++||++|+..|||++++.+||+|+....+|++++...+...
T Consensus        84 f~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~  163 (372)
T KOG3912|consen   84 FNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHL  163 (372)
T ss_pred             CCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccc
Confidence            44455778999999999999999999999999999999999999999999999999999999999999999998765432


Q ss_pred             cCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHH-HHHHH---HhhcCchhh--hcc
Q psy11593        234 KARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPC-AACTC---FISDWDKIF--QHG  307 (400)
Q Consensus       234 ~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~-~l~~~---~~~~~~~i~--~~~  307 (400)
                      .+++.....+...|+++++.+.+.-|.+.|+.||.+|++++.+....-+-+.+|.++ .++.+   +...+...+  +.+
T Consensus       164 ~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g  243 (372)
T KOG3912|consen  164 VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRG  243 (372)
T ss_pred             ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCc
Confidence            222222335678999999999999999999999999988765544434446666433 33222   222221110  111


Q ss_pred             ccccchHHHHH-----HHHHHHHHH---------HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHH
Q psy11593        308 FFYNYTWFIVF-----LVLLNASGG---------LIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGA  373 (400)
Q Consensus       308 ~~~~~~~~~~l-----~i~~~al~g---------~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~  373 (400)
                      -+..|.. .|.     ..+..++++         ..--.+.|+.++..+...+.++..+.++++..+.+|.+...|+.|.
T Consensus       244 ~~eD~~~-~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGF  322 (372)
T KOG3912|consen  244 VLEDWGD-AFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGF  322 (372)
T ss_pred             chhhHHH-HHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHH
Confidence            1111100 000     001112222         2222467999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy11593        374 FFVMCSVFLYSRT  386 (400)
Q Consensus       374 ~lVi~gv~ly~~~  386 (400)
                      ++.+.|+++|+..
T Consensus       323 liLi~Gi~lY~~i  335 (372)
T KOG3912|consen  323 LILIMGIILYNQI  335 (372)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999843

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.90  E-value=6.1e-21  Score=189.47  Aligned_cols=269  Identities=18%  Similarity=0.165  Sum_probs=187.6

Q ss_pred             HHHHHHccccCCCCcch-HHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHHHHHHHH
Q psy11593         94 SLSMRYARMKNKDELFI-SSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNL  172 (400)
Q Consensus        94 ~l~~k~s~~~~~~~~~~-~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~~~~~~l  172 (400)
                      .+..|+.-+.     ++ |.++..+|-++..+++..+. ..+.++.++.    .    ..++++......|+++...+..
T Consensus        65 ~~~nK~vl~~-----~~~P~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~----~----~~~~~~~~llp~gl~~~~~~~~  130 (350)
T PTZ00343         65 VVDNKLALNM-----LPLPWTISSLQLFVGWLFALLYW-ATGFRKIPRI----K----SLKLFLKNFLPQGLCHLFVHFG  130 (350)
T ss_pred             HHHHHHHHHh-----CChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCC----C----CHHHHHHHHHHHHHHHHHHHHH
Confidence            4556766542     45 88888998888776655442 2211111110    0    0012344567788888777777


Q ss_pred             HHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHHHHHH
Q psy11593        173 LYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATI  252 (400)
Q Consensus       173 ~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~l~~l  252 (400)
                      .+.|+++.+++.++++.++.|+++++++++++|||+++++|+++++.++||.+...++.          .....|+++++
T Consensus       131 ~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~----------~~~~~G~~~~l  200 (350)
T PTZ00343        131 AVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL----------HFTWLAFWCAM  200 (350)
T ss_pred             HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc----------hhHHHHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999864322          13467999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCc---hHHHHHHHH--HHhHHHHHHHHHHhhcCchhhh-c----cccccchH-HHHHHHH
Q psy11593        253 LACLLSGLAGVYFEMILKGSDV---SIWMRNVQL--SLLSLPCAACTCFISDWDKIFQ-H----GFFYNYTW-FIVFLVL  321 (400)
Q Consensus       253 ~aa~~~al~~V~~ekllk~~~~---~~~~~~~~l--~~~g~~~~l~~~~~~~~~~i~~-~----~~~~~~~~-~~~l~i~  321 (400)
                      +|++++|+.+++.||.+++.+.   +....+.+.  ...|.++.++.....++..... .    ..+..+.. ..+..++
T Consensus       201 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~  280 (350)
T PTZ00343        201 LSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIF  280 (350)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHH
Confidence            9999999999999999876431   111122222  3455555555444333221100 0    00111111 1112233


Q ss_pred             HHHHHHHHHH----HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593        322 LNASGGLIVA----VVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT  386 (400)
Q Consensus       322 ~~al~g~~~~----~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~  386 (400)
                      ..++.+.+..    +.++..+++..+.+.++.+++++++|+++|||++|..+++|.+++++|+++|++-
T Consensus       281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            3344444433    4778899999999999999999999999999999999999999999999999865

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.90  E-value=2.5e-21  Score=187.97  Aligned_cols=277  Identities=16%  Similarity=0.081  Sum_probs=188.7

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchh
Q psy11593         79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLK  158 (400)
Q Consensus        79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~  158 (400)
                      .++++++.++.|+++.+.+|.+.+     .++|....++|..+..++.+++.   .+++.++             .+...
T Consensus         5 ~~l~~l~a~~~Wg~~~~~~k~~~~-----~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~-------------~~~~~   63 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGLIRGVSE-----SLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQ-------------FPKRY   63 (295)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc-----cCChHHHHHHHHHHHHHHHHHHc---ccccccc-------------ccHHH
Confidence            456677788999999999999764     36888899998766554433321   1101110             11112


Q ss_pred             hHHHHHHHHHHHHHHHHHhh----cCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccccccc
Q psy11593        159 VGVPALLYVIQNNLLYISAS----NLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEK  234 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~----~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~  234 (400)
                      ....++.+++++.+.+.+++    +++++...++.++.|+++++++++++|||++++||.+++++++|++++..++.+.+
T Consensus        64 ~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~  143 (295)
T PRK11689         64 LLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLS  143 (295)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccch
Confidence            34445556777788887775    46888899999999999999999999999999999999999999998876543110


Q ss_pred             CCC-CcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccch
Q psy11593        235 ARP-ADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYT  313 (400)
Q Consensus       235 ~~~-~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~  313 (400)
                      ..+ +....+...|+++++++++++|++.++.||..++.+. ..   ......+..+ .+.... +++..      ...+
T Consensus       144 ~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~-~~---~~~~~~~~~l-~~~~~~-~~~~~------~~~~  211 (295)
T PRK11689        144 LAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKNG-IT---LFFILTALAL-WIKYFL-SPQPA------MVFS  211 (295)
T ss_pred             hhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCCc-hh---HHHHHHHHHH-HHHHHH-hcCcc------ccCC
Confidence            000 0011133569999999999999999999998655432 11   1111122222 221122 21111      0112


Q ss_pred             HHHHHHHH----HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593        314 WFIVFLVL----LNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS  388 (400)
Q Consensus       314 ~~~~l~i~----~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~  388 (400)
                      ...|..+.    ..+++..+..+.+|+.++...+...++.|+++.+++++++||+++..+++|+++|+.|+++.....+
T Consensus       212 ~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        212 LPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            22222222    2334455567788999999999999999999999999999999999999999999999876654443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.89  E-value=1.9e-20  Score=181.65  Aligned_cols=277  Identities=10%  Similarity=-0.047  Sum_probs=196.4

Q ss_pred             hhhhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccC
Q psy11593         73 SRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQN  152 (400)
Q Consensus        73 ~~~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~  152 (400)
                      |.++.++++.+++.++.|+++...+|+..+     ++++...+++|.++..++.+++..+.+. +.             +
T Consensus         7 ~~~~~~~~~~~~la~~~~~~~~~~~K~~~~-----~~~~~~~~~~R~~~a~l~l~~~~~~~~~-~~-------------~   67 (293)
T PRK10532          7 KLPVWLPILLLLIAMASIQSGASLAKSLFP-----LVGAPGVTALRLALGTLILIAIFKPWRL-RF-------------A   67 (293)
T ss_pred             ccccchHHHHHHHHHHHHHhhHHHHHHHHH-----HcCHHHHHHHHHHHHHHHHHHHHhHHhc-cC-------------C
Confidence            345677789999999999999999999875     2588889999988876665544322211 11             1


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccccc
Q psy11593        153 PLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVV  232 (400)
Q Consensus       153 ~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~  232 (400)
                      ++++......|+++...+.+.++|++++|++.+.++.++.|+++++++.    ||.++.+  ++.++++|+.++..++.+
T Consensus        68 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~~--~~~i~~~Gv~li~~~~~~  141 (293)
T PRK10532         68 KEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDFV--WVVLAVLGLWFLLPLGQD  141 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHHH--HHHHHHHHHheeeecCCC
Confidence            2333345566777888889999999999999999999999999998863    5555544  466789999887644322


Q ss_pred             ccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhcccccc-
Q psy11593        233 EKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYN-  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~-  311 (400)
                      .       ......|+++.+++++++|++.++.||..++.+.  .....+. ..+.+...+.....++.     ..++. 
T Consensus       142 ~-------~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~--~~~~~~~-~~~~~~l~~~~~~~~~~-----~~~~~~  206 (293)
T PRK10532        142 V-------SHVDLTGAALALGAGACWAIYILSGQRAGAEHGP--ATVAIGS-LIAALIFVPIGALQAGE-----ALWHWS  206 (293)
T ss_pred             c-------ccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCc--hHHHHHH-HHHHHHHHHHHHHccCc-----ccCCHH
Confidence            1       1234579999999999999999999998765532  2222322 33333333322222111     00111 


Q ss_pred             -chHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593        312 -YTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS  389 (400)
Q Consensus       312 -~~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~  389 (400)
                       +....++.++.+.++..+..+.+++.++...+...+++|+++.++|++++||+++..+++|+++|++|+..+.+..++
T Consensus       207 ~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        207 ILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence             111234444555566667778889999999999999999999999999999999999999999999999887655433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.89  E-value=7.9e-21  Score=180.31  Aligned_cols=256  Identities=11%  Similarity=0.097  Sum_probs=183.2

Q ss_pred             hhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhh-HHHHHHHHH
Q psy11593         90 NAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKV-GVPALLYVI  168 (400)
Q Consensus        90 ~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~i~a~l~~~  168 (400)
                      |+.+.+.+|++-+.    ..++..+.+.|-+...++..+...++ . + +              +++..+ ...+++..+
T Consensus         1 Wg~~~~~~k~~~~~----~~~~~~~~~~r~~~~~l~l~~~~~~~-~-~-~--------------~~~~~~~~~~~~~~~l   59 (260)
T TIGR00950         1 WGTTGVVIGQYLEG----QVPLYFAVFRRLIFALLLLLPLLRRR-P-P-L--------------KRLLRLLLLGALQIGV   59 (260)
T ss_pred             CcchHHHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHHhc-c-C-H--------------hHHHHHHHHHHHHHHH
Confidence            67888889997642    23666677777666555444433222 1 1 1              222233 444456789


Q ss_pred             HHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHH
Q psy11593        169 QNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGF  248 (400)
Q Consensus       169 ~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~  248 (400)
                      ++.+.++|++++|+++.+++.++.|+++++++++++|||++++||.++.++++|++++..++..         .....|+
T Consensus        60 ~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~---------~~~~~G~  130 (260)
T TIGR00950        60 FYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL---------SINPAGL  130 (260)
T ss_pred             HHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc---------cccHHHH
Confidence            9999999999999999999999999999999999999999999999999999999988654321         2346799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchH--HHHHHHHHHHHH
Q psy11593        249 AATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTW--FIVFLVLLNASG  326 (400)
Q Consensus       249 l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~--~~~l~i~~~al~  326 (400)
                      .++++++++++.+.++.|+..++.+.+....+......+.++..+.....+.+.     ..+..++  ..+..++...++
T Consensus       131 ~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  205 (260)
T TIGR00950       131 LLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-----QALSLQWGALLYLGLIGTALA  205 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CcchHHHHHHHHHHHHHHHHH
Confidence            999999999999999999987765433222222223344444433332222111     0111111  122223334556


Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHH
Q psy11593        327 GLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSV  380 (400)
Q Consensus       327 g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv  380 (400)
                      ..+..+.+|+.++...+...+++|+++.+++++++||+++..+++|.++++.|+
T Consensus       206 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       206 YFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            666777889999999999999999999999999999999999999999999885

>TIGR00803 nst UDP-galactose transporter

Probab=99.89  E-value=2.3e-22  Score=187.28  Aligned_cols=221  Identities=42%  Similarity=0.603  Sum_probs=195.3

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCC
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPA  238 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~  238 (400)
                      +.+|+..|+.+|.+.++++.+.++...+.. +.+.+.++++.+..++++++..||.++.....|+..++.++..+   ..
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~---~~   77 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSA---KT   77 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCc---cc
Confidence            478999999999999999999999999999 99999999999999999999999999999999999887654321   01


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHH
Q psy11593        239 DFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVF  318 (400)
Q Consensus       239 ~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l  318 (400)
                      ...++...|..+++.++++++++++|.|+..|+++...+.+++++.+++.+.........+++.....+++++++...|.
T Consensus        78 ~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (222)
T TIGR00803        78 LMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWI  157 (222)
T ss_pred             cccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHH
Confidence            12246678999999999999999999999988877788999999999998876555555555555566777888999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHh
Q psy11593        319 LVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLY  383 (400)
Q Consensus       319 ~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly  383 (400)
                      .++.+++++.++++++|+.|++.++++..++++++.++|+++|||+++..+++|+.+|+.|+++|
T Consensus       158 ~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       158 VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            99999999999999999999999999999999999999999999999999999999999998876

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.83  E-value=1.9e-18  Score=166.63  Aligned_cols=271  Identities=13%  Similarity=0.074  Sum_probs=173.5

Q ss_pred             HHHHHHHHHHhhHHHHHHH-HccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHh-cCCchhhhHHHhhhhcccCcccch
Q psy11593         80 TTSLITLTLQNAIVSLSMR-YARMKNKDELFISSTGVLMAEVVKLVVCLGLVFAD-EGFHVGRFINLVRAHTIQNPLDTL  157 (400)
Q Consensus        80 ~l~l~ll~~~~~~~~l~~k-~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~-~~~~~~~~~~~l~~~~~~~~~~~~  157 (400)
                      .++-++.++.++...++.| .++++      ++.+  +.......++.+++.... .+...+.           .+++++
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~------~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~   63 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE------PDFL--WWALLAHSVLLTPYGLWYLAQVGWSR-----------LPATFW   63 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch------hHHH--HHHHHHHHHHHHHHHHHhcccCCCCC-----------cchhhH
Confidence            3455667788888888888 44432      2222  222233322233322221 1111110           112223


Q ss_pred             -hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCC
Q psy11593        158 -KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKAR  236 (400)
Q Consensus       158 -~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~  236 (400)
                       .....++....+..+.+.|+++.|++..+.+.++.|+++++++++++|||+++++|+|+++++.|++++..++..    
T Consensus        64 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~----  139 (281)
T TIGR03340        64 LLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA----  139 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc----
Confidence             345566678899999999999999999999999999999999999999999999999999999999987654321    


Q ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHH-HHHHH---hhcCchhhhccccccc
Q psy11593        237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCA-ACTCF---ISDWDKIFQHGFFYNY  312 (400)
Q Consensus       237 ~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~-l~~~~---~~~~~~i~~~~~~~~~  312 (400)
                           .....|+.+.++++++++++.++.|+..++.+..  ........++.... .+...   ..++......  ...+
T Consensus       140 -----~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  210 (281)
T TIGR03340       140 -----QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAF--YSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPY--ARQI  210 (281)
T ss_pred             -----ccchhHHHHHHHHHHHHHHhhhhccccccchhcc--cccHHHHHHHHHHHHHHHHHHHHHHhccchhhh--HHHH
Confidence                 1223577788999999999999877654332211  01111111221111 11111   1111110000  0000


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHH
Q psy11593        313 TWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFL  382 (400)
Q Consensus       313 ~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~l  382 (400)
                      -...+...+..+++..+..+.+++.++...+...+++|+++.++|++++||+++..+++|+++|+.|+++
T Consensus       211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            0112233334445556666778888888888888999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.82  E-value=5.8e-17  Score=154.95  Aligned_cols=283  Identities=18%  Similarity=0.179  Sum_probs=191.0

Q ss_pred             hhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcc
Q psy11593         75 AFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPL  154 (400)
Q Consensus        75 ~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~  154 (400)
                      .........++..+.|+......|...+.    ..+.....+.+.+....+..+...+... ...           +..+
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~   67 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVES----LDPFLFAAALRFLIAALLLLPLLLLEPR-GLR-----------PALR   67 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCChHHHHHHHHHHHHHHHHHHHHhhcc-ccc-----------cccc
Confidence            34556666777778899998888876642    2244555555666555542222222110 000           0111


Q ss_pred             c-chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHH-HHhcCCccHHHHHHHHHHHHhhheeeccccc
Q psy11593        155 D-TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAI-ILLKKKISKIQWISLVILVVGVALVQLSSVV  232 (400)
Q Consensus       155 ~-~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~-~~L~erls~~qwlal~l~~~GVviv~~~~~~  232 (400)
                      + ++.....++.....+.+.+.++++++++..+++.++.|++++++++ +++|||+++++|.+++++++|++++..++..
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          68 PWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            2 2335666677889999999999999999999999999999999997 7779999999999999999999999887664


Q ss_pred             ccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccc
Q psy11593        233 EKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNY  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~  312 (400)
                      ..      .. ...|+++.+++++++|++.++.|+.. +.+........++  .+...........+..   .......+
T Consensus       148 ~~------~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~  214 (292)
T COG0697         148 GG------IL-SLLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQL--LLALLLLLLFFLSGFG---APILSRAW  214 (292)
T ss_pred             ch------hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHH--HHHHHHHHHHHhcccc---ccCCHHHH
Confidence            21      01 57899999999999999999999887 3221111110111  1111111111111111   00001111


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593        313 TWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT  386 (400)
Q Consensus       313 ~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~  386 (400)
                      ....+..++..+++..+..+.++..++...+...+..++++.+++++++||+++..+++|+++++.|+.+...+
T Consensus       215 ~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         215 LLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            12223333333455666677888999988888889999999999999999999999999999999999888766

>TIGR00688 rarD rarD protein

Probab=99.81  E-value=2.7e-17  Score=156.31  Aligned_cols=250  Identities=12%  Similarity=0.106  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCccc-ch
Q psy11593         79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLD-TL  157 (400)
Q Consensus        79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~-~~  157 (400)
                      ++++.++.++.|+.+.+.+|+..+      +++.++++.|.++..++-+++....++  .++..++.++   .++++ +.
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~~~~------~~~~~i~~~R~~~a~~~l~~~~~~~~~--~~~~~~~~~~---~~~~~~~~   71 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKLLKP------LPATDILGHRMIWSFPFMLLSVTLFRQ--WAALIERLKR---IQKRPLIL   71 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcc------CCHHHHHHHHHHHHHHHHHHHHHHHcc--hHHHHHHHhC---cccchHHH
Confidence            567788888999999999998432      588999999999876554443333222  1110111111   01122 33


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCC
Q psy11593        158 KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARP  237 (400)
Q Consensus       158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~  237 (400)
                      .....+++..+++.+.++|++++++++++++.++.|+++++++++++|||++++||++++++++|++++..++.+     
T Consensus        72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~-----  146 (256)
T TIGR00688        72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGS-----  146 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCC-----
Confidence            467778888999999999999999999999999999999999999999999999999999999999987543211     


Q ss_pred             CcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHH
Q psy11593        238 ADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIV  317 (400)
Q Consensus       238 ~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~  317 (400)
                           ..    .+++++++++|++.++.||..++ +..   +.........++........++.....   ......+.+
T Consensus       147 -----~~----~~~l~aa~~~a~~~i~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  210 (256)
T TIGR00688       147 -----LP----WEALVLAFSFTAYGLIRKALKNT-DLA---GFCLETLSLMPVAIYYLLQTDFATVQQ---TNPFPIWLL  210 (256)
T ss_pred             -----ch----HHHHHHHHHHHHHHHHHhhcCCC-Ccc---hHHHHHHHHHHHHHHHHHHhccCcccc---cCchhHHHH
Confidence                 11    24678999999999998886432 211   111101111122221111112211000   011112222


Q ss_pred             HH--HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy11593        318 FL--VLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYL  360 (400)
Q Consensus       318 l~--i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~ll  360 (400)
                      +.  .+..+++..+....+|+.++...+...+++|+++.++++++
T Consensus       211 l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       211 LVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            22  12345566777788999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG4510|consensus

Probab=99.78  E-value=1e-19  Score=167.39  Aligned_cols=281  Identities=16%  Similarity=0.142  Sum_probs=188.2

Q ss_pred             hHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCccc
Q psy11593         76 FMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLD  155 (400)
Q Consensus        76 ~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~  155 (400)
                      .-.+.+++.+.-++.+++++..|.....       |-.....|-++.+++..++....+..-..+          ...|.
T Consensus        36 p~~gl~l~~vs~ff~~~~vv~t~~~e~~-------p~e~a~~r~l~~mlit~pcliy~~~~v~gp----------~g~R~   98 (346)
T KOG4510|consen   36 PNLGLLLLTVSYFFNSCMVVSTKVLEND-------PMELASFRLLVRMLITYPCLIYYMQPVIGP----------EGKRK   98 (346)
T ss_pred             CccCceehhhHHHHhhHHHhhhhhhccC-------hhHhhhhhhhhehhhhheEEEEEeeeeecC----------CCcEE
Confidence            3445556666667788888888776653       333444455566666666543322100000          00122


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccC
Q psy11593        156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA  235 (400)
Q Consensus       156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~  235 (400)
                      +  +..+++..+.+..+.|+|++|++.+++.++..+.|.+|++++|.+|||+.|+..-++..+.+.||+++..|+..-++
T Consensus        99 ~--LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~  176 (346)
T KOG4510|consen   99 W--LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGD  176 (346)
T ss_pred             E--EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCC
Confidence            2  46778888888899999999999999999999999999999999999999999999999999999999888642211


Q ss_pred             ---CCCccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHh-hcCchhhhccccc
Q psy11593        236 ---RPADFV-ENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFI-SDWDKIFQHGFFY  310 (400)
Q Consensus       236 ---~~~~~~-~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~-~~~~~i~~~~~~~  310 (400)
                         +.+.+. ....+|.+..+.++++.|-..++.|++.|+-+...-+.+  +...+.+.+++.... .+++ +...    
T Consensus       177 ~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsy--f~~i~lV~s~I~~~~ig~~~-lP~c----  249 (346)
T KOG4510|consen  177 TTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSY--FSLITLVVSLIGCASIGAVQ-LPHC----  249 (346)
T ss_pred             CccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehH--HHHHHHHHHHHHHhhcccee-cCcc----
Confidence               111111 345678888899999988888889988787653221111  223344444443321 1111 1001    


Q ss_pred             cchHHHHHHHH-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHH
Q psy11593        311 NYTWFIVFLVL-LNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFL  382 (400)
Q Consensus       311 ~~~~~~~l~i~-~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~l  382 (400)
                      +-+++.+..+. ...++++++...+..-.+-..++..+..++++.++.+++|+|.|++|.|+|+++|+.++..
T Consensus       250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~  322 (346)
T KOG4510|consen  250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW  322 (346)
T ss_pred             ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence            11222111222 2345667776666555555667889999999999999999999999999999999998643

>KOG1581|consensus

Probab=99.77  E-value=2.8e-16  Score=147.53  Aligned_cols=270  Identities=13%  Similarity=0.136  Sum_probs=208.2

Q ss_pred             CCCcch-HHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHHHHHHHHHHHHhhcCChH
Q psy11593        105 KDELFI-SSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAA  183 (400)
Q Consensus       105 ~~~~~~-~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s  183 (400)
                      ++++|- +.-.+|.+.+..++.+..++...+. ..            ..+..++.|...++...+...+.|.|++|++-+
T Consensus        44 ~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~-~~------------~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyP  110 (327)
T KOG1581|consen   44 DGERFEHSLFLVFCQRLVALLVSYAMLKWWKK-EL------------SGVAPLYKYSLISFTNTLSSWCGYEALKYVSYP  110 (327)
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcccc-cC------------CCCCchhHHhHHHHHhhcchHHHHHHHHhccch
Confidence            456775 4445788888888888555543322 11            123456678889999999999999999999999


Q ss_pred             HHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy11593        184 TSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGV  263 (400)
Q Consensus       184 ~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V  263 (400)
                      +..+..++|.+.++++..++.|+|+++.++++.++..+||.+....+.+++ ..+..+.+..+|+.++...-++.|+.+.
T Consensus       111 tq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s-~~~~g~~ns~~G~~Ll~~~L~fDgfTn~  189 (327)
T KOG1581|consen  111 TQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDS-SSKSGRENSPIGILLLFGYLLFDGFTNA  189 (327)
T ss_pred             HHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCC-ccccCCCCchHhHHHHHHHHHHHhhHHh
Confidence            999999999999999999999999999999999999999998876544331 2223345788999999999999999999


Q ss_pred             HHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHH---HHHHHHHHHHHHHHHHHHhhhhH
Q psy11593        264 YFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIV---FLVLLNASGGLIVAVVVKYADNI  340 (400)
Q Consensus       264 ~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~---l~i~~~al~g~~~~~~~k~~~ai  340 (400)
                      .++++.|....+.+.....+..++.+.+.... +..+.....-.|...++...+   +.-.+.++|+..+.+.++..+++
T Consensus       190 tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~l-i~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGsl  268 (327)
T KOG1581|consen  190 TQDSLFKKYKVSSLHMMFGVNLFSAILNGTYL-ILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSL  268 (327)
T ss_pred             HHHHHhccCCccHhHHHHHHHHHHHHHHHHhh-hcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccH
Confidence            99999998877776666666677777666553 233321111122222233333   23345677888888899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593        341 LKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS  389 (400)
Q Consensus       341 ~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~  389 (400)
                      +-....+.+-++++++|.+.||+++++.|++|..+|..|+++-...+++
T Consensus       269 t~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  269 TFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999876655554

>KOG1580|consensus

Probab=99.77  E-value=8.7e-18  Score=152.04  Aligned_cols=262  Identities=14%  Similarity=0.077  Sum_probs=191.9

Q ss_pred             CCcch-HHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHHHHHHHHHHHHhhcCChHH
Q psy11593        106 DELFI-SSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAAT  184 (400)
Q Consensus       106 ~~~~~-~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~  184 (400)
                      +++|. .-+.||++....-+.+-.++...++.+.             +..+.+.|+..++.|.+++.....|++++|.++
T Consensus        47 ~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~-------------D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPT  113 (337)
T KOG1580|consen   47 IEKFTFALALVFFQCTANTVFAKVLFLIRKKTEI-------------DNTPTKMYAACSASYLLAMVSSNQALQYVPYPT  113 (337)
T ss_pred             hheehHHHHHHHHHHHHHHHHHHhheeecccccc-------------cCCcchHHHHHHHHHHHHHHhccchhcccCCcH
Confidence            35565 3455677666655555433322221111             123445689999999999999999999999999


Q ss_pred             HHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHHHHHHHHHHHHHHHHHH
Q psy11593        185 SQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVY  264 (400)
Q Consensus       185 ~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~  264 (400)
                      ..+-.+++|+.+.++.+++.+++++|+++.++++.++||++....+...+   +..+.....|.++.+++-.+.|+.++.
T Consensus       114 qVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~---g~e~~t~g~GElLL~lSL~mDGlTg~~  190 (337)
T KOG1580|consen  114 QVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG---GAEDKTFGFGELLLILSLAMDGLTGSI  190 (337)
T ss_pred             HHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccC---CCcccccchHHHHHHHHHHhcccchhH
Confidence            99999999999999999999999999999999999999999987754211   112345678999999999999999999


Q ss_pred             HHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHH---HHHHHHHHHHHHHHHHHHhhhhHH
Q psy11593        265 FEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIV---FLVLLNASGGLIVAVVVKYADNIL  341 (400)
Q Consensus       265 ~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~---l~i~~~al~g~~~~~~~k~~~ai~  341 (400)
                      ++|+-+.+.....-....+.+|+.+....+++ ..|+..+-..|-+.++...|   +..+..++|+.++...+.+.++..
T Consensus       191 Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~l-fTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLt  269 (337)
T KOG1580|consen  191 QDRIRASYQRTGTSMMFYTNLWSTLYLGAGLL-FTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLT  269 (337)
T ss_pred             HHHHHHhhccCchhhHHHHHHHHHHHhhhhhe-ehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCee
Confidence            99987765433333334456677766555443 23332211112222333223   223456778888888888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593        342 KGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS  384 (400)
Q Consensus       342 ~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~  384 (400)
                      .++.++.+..|+++.|+++|+++++..||+|..+|..|...=.
T Consensus       270 CSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  270 CSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             EEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            9999999999999999999999999999999999999876433

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.66  E-value=1.6e-13  Score=129.05  Aligned_cols=274  Identities=18%  Similarity=0.215  Sum_probs=187.7

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593         77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT  156 (400)
Q Consensus        77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~  156 (400)
                      .-+++..+..-+.|+..+...|+....      ++.++.--|-+-.+.+.+.++...++  .+.    +++ ..++||.+
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~------~~~eIlahRviwS~~~~l~ll~~~r~--~~~----~~~-~~~~p~~~   72 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLEPL------PATEILAHRVIWSFPFMLALLFLLRQ--WRE----LKQ-LLKQPKTL   72 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHccC------CHHHHHHHHHHHHHHHHHHHHHHHhh--hHH----HHH-HHhCcHHH
Confidence            345677777788899999999997753      55566655555555444444443332  121    122 33577888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCC
Q psy11593        157 LKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKAR  236 (400)
Q Consensus       157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~  236 (400)
                      ..+.+.+++...++.++.+|..+-..-++++-+...|++..+++.+|+|||+++.||++++++.+||..-.....+    
T Consensus        73 ~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~----  148 (293)
T COG2962          73 LMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS----  148 (293)
T ss_pred             HHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC----
Confidence            8788888999999999999999999999999999999999999999999999999999999999999877554332    


Q ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCC-chHHHHHHHHHHhHHHHHHHHHH-hhcCchhhhccccc-cch
Q psy11593        237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSD-VSIWMRNVQLSLLSLPCAACTCF-ISDWDKIFQHGFFY-NYT  313 (400)
Q Consensus       237 ~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~-~~~~~~~~~l~~~g~~~~l~~~~-~~~~~~i~~~~~~~-~~~  313 (400)
                            -....    +.=|+.+++++. .||.+|-.+ .+.....+.+   . +.+++..+ ..+...     +.. ..+
T Consensus       149 ------lpwva----l~la~sf~~Ygl-~RK~~~v~a~~g~~lE~l~l---~-p~al~yl~~l~~~~~-----~~~~~~~  208 (293)
T COG2962         149 ------LPWVA----LALALSFGLYGL-LRKKLKVDALTGLTLETLLL---L-PVALIYLLFLADSGQ-----FLQQNAN  208 (293)
T ss_pred             ------CcHHH----HHHHHHHHHHHH-HHHhcCCchHHhHHHHHHHH---h-HHHHHHHHHHhcCch-----hhhcCCc
Confidence                  22333    344577888776 555555432 2222222222   2 22222222 222221     111 112


Q ss_pred             HHHHHHHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCC
Q psy11593        314 WFIVFLVLL---NASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP  387 (400)
Q Consensus       314 ~~~~l~i~~---~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~  387 (400)
                      ...++.+..   .++.-.+.+..-|..+-.+.++..|.+|..-.+++++++||+++..++++.+.|-.|+.+|..+.
T Consensus       209 ~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         209 SLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             hHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            222222222   23333344455577888888999999999999999999999999999999999999999887654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.60  E-value=1.1e-12  Score=127.08  Aligned_cols=270  Identities=9%  Similarity=0.018  Sum_probs=174.6

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchh
Q psy11593         79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLK  158 (400)
Q Consensus        79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~  158 (400)
                      .++..++.++.|++..+..|....      .++.+.+  +..+..++...+....+..+ ..           .++-+..
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~g------~~~~~~~--~~~~g~l~~~~~~~~~~~~~-~~-----------~~~~~~~   61 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIGG------GPYSQTL--GTTFGALILSIAIAIFVLPE-FW-----------ALSIFLV   61 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccCC------CHHHHHH--HHHHHHHHHHHHHHHHhCCc-cc-----------ccHHHHH
Confidence            456677788999999999998652      1333333  22223222222222211100 00           1111112


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhh-hhHHHHHHHHHHHhcCCccHHH----HHHHHHHHHhhheeecccccc
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQ-LKILTTAIFAIILLKKKISKIQ----WISLVILVVGVALVQLSSVVE  233 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~-~~pl~tal~s~~~L~erls~~q----wlal~l~~~GVviv~~~~~~~  233 (400)
                      -.+.+++....|.+++.+.++++.+.+..+.+ +.+++.++++.+++|||.++++    ++|+++.++|++++...+.++
T Consensus        62 g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~  141 (290)
T TIGR00776        62 GLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKS  141 (290)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccc
Confidence            34556678999999999999999999999999 9999999999999999999999    999999999999986654321


Q ss_pred             cCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHH---HHHHHHHhHHHHHHHHHHhhcCchhhhccccc
Q psy11593        234 KARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWM---RNVQLSLLSLPCAACTCFISDWDKIFQHGFFY  310 (400)
Q Consensus       234 ~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~---~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~  310 (400)
                      .  +++...+...|+++.++++++++++.+..|+. + .+ +...   +..-+...+.++..+.   .+.+     . +.
T Consensus       142 ~--~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-~-~~-~~~~~~~~~~g~~~~~~~~~~~~---~~~~-----~-~~  207 (290)
T TIGR00776       142 A--GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-G-VD-GLSVLLPQAIGMVIGGIIFNLGH---ILAK-----P-LK  207 (290)
T ss_pred             c--ccccccchhhHHHHHHHHHHHHHHHHHHHHHc-C-CC-cceehhHHHHHHHHHHHHHHHHH---hccc-----c-hH
Confidence            1  00000233569999999999999999988865 2 22 1111   2111222222222211   0000     0 11


Q ss_pred             cchHHHHHHHH---HHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHH----HHHHHHHHHHHH
Q psy11593        311 NYTWFIVFLVL---LNASGGLIVAVVVK-YADNILKGFATSLAIVLACVFQVYLFAFVITFQFI----VGAFFVMCSVFL  382 (400)
Q Consensus       311 ~~~~~~~l~i~---~~al~g~~~~~~~k-~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~l----iG~~lVi~gv~l  382 (400)
                        +...|..++   ..+++..++....+ +.++......++.+++.++++++++++|..+..++    +|.++|+.|+.+
T Consensus       208 --~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l  285 (290)
T TIGR00776       208 --KYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI  285 (290)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence              112221111   12334444444456 78888888999999999999999999999999999    999999999876


Q ss_pred             hc
Q psy11593        383 YS  384 (400)
Q Consensus       383 y~  384 (400)
                      -.
T Consensus       286 ~~  287 (290)
T TIGR00776       286 LG  287 (290)
T ss_pred             Hh
Confidence            43

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1441|consensus

Probab=99.58  E-value=9.1e-15  Score=141.49  Aligned_cols=225  Identities=20%  Similarity=0.214  Sum_probs=167.3

Q ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccC
Q psy11593        156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA  235 (400)
Q Consensus       156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~  235 (400)
                      +......|+.+++...+...++++.|.+.+|++..+.|+++.++++++.+|+.++.-|+++.....||.+....+.    
T Consensus        83 ~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~----  158 (316)
T KOG1441|consen   83 LRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL----  158 (316)
T ss_pred             hHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc----
Confidence            3446778999999999999999999999999999999999999999999999999999999999999999876443    


Q ss_pred             CCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHH--HHHHhHHHHHH-HHHHhhcCchhhhccccccc
Q psy11593        236 RPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNV--QLSLLSLPCAA-CTCFISDWDKIFQHGFFYNY  312 (400)
Q Consensus       236 ~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~--~l~~~g~~~~l-~~~~~~~~~~i~~~~~~~~~  312 (400)
                            .....|++.++.+.+..++..++.++++++++.+..-.+.  .+...+..+.+ +.....+++.. .......+
T Consensus       159 ------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~  231 (316)
T KOG1441|consen  159 ------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPW  231 (316)
T ss_pred             ------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeecccc
Confidence                  2567999999999999999999999999654333222222  12223333333 32223333322 00011122


Q ss_pred             hHHHHHHHHHH---HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593        313 TWFIVFLVLLN---ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS  389 (400)
Q Consensus       313 ~~~~~l~i~~~---al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~  389 (400)
                      +...+..++.+   -..+.....++...++++-+.+..+..++.++.||++|+++.|+.+.+|.++.++|+++|++.+.+
T Consensus       232 ~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~  311 (316)
T KOG1441|consen  232 FVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK  311 (316)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence            22222222222   123344456778888888888888888899999999999999999999999999999999987765


Q ss_pred             CC
Q psy11593        390 KP  391 (400)
Q Consensus       390 ~~  391 (400)
                      ..
T Consensus       312 ~~  313 (316)
T KOG1441|consen  312 EK  313 (316)
T ss_pred             hh
Confidence            44

>KOG1443|consensus

Probab=99.50  E-value=3.4e-12  Score=120.22  Aligned_cols=294  Identities=16%  Similarity=0.116  Sum_probs=190.5

Q ss_pred             hHhhhhHHHHHHHHHHHHHhhHHHHHHHHccccC-CCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhc
Q psy11593         71 AQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKN-KDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHT  149 (400)
Q Consensus        71 ~~~~~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~-~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~  149 (400)
                      ++.+......+.++   +.|=.-++..++..+.. .+.+|| --++-+..+++++.+.......+.+..+..       .
T Consensus         8 ~~~~~~rV~~L~lV---l~yY~~Si~Ltf~~~~~~~~f~fP-Lf~ts~h~~v~flfa~~~~~l~~~~~~r~r-------~   76 (349)
T KOG1443|consen    8 NQFLMNRVLTLALV---LLYYFLSIGLTFYFKWLTKNFHFP-LFVTSLHLAVKFLFAALSRRLYQCSVPRAR-------V   76 (349)
T ss_pred             hHHHHHHHHHHHHH---HHHHHHHHHHHHHhhhhhcCcCCc-hHHHHHHHHHHHHHHHHHHHHHhccCCccc-------c
Confidence            44444443333333   44444444447766542 133444 335566777888887765543332122210       1


Q ss_pred             ccCcccchh-hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeec
Q psy11593        150 IQNPLDTLK-VGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQL  228 (400)
Q Consensus       150 ~~~~~~~~~-~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~  228 (400)
                      ..+|++.++ +++-|+.-+..-.+..++++|++.+.|++..++.|+|+.+|+.+|-=||.+|.-...+++..+|+.+...
T Consensus        77 ~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~  156 (349)
T KOG1443|consen   77 VLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTY  156 (349)
T ss_pred             CCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEe
Confidence            124445444 4566777888899999999999999999999999999999999997799999999999999999999987


Q ss_pred             ccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCC---chHHHHHHHHHHhHHHHHHHHHHhhcCchhh-
Q psy11593        229 SSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSD---VSIWMRNVQLSLLSLPCAACTCFISDWDKIF-  304 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~---~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~-  304 (400)
                      ++.+          ....|+.+++++++++|+...+.++++++.+   ..+.....++..+..+..++..+..+|.... 
T Consensus       157 KsTq----------f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~  226 (349)
T KOG1443|consen  157 KSTQ----------FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLIT  226 (349)
T ss_pred             cccc----------eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccch
Confidence            7543          5678999999999999999999999998754   1111111222222222223322333443221 


Q ss_pred             hccccccchH-HHHHHHHHHHHHHHHHHHHH--------HhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHH
Q psy11593        305 QHGFFYNYTW-FIVFLVLLNASGGLIVAVVV--------KYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFF  375 (400)
Q Consensus       305 ~~~~~~~~~~-~~~l~i~~~al~g~~~~~~~--------k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~l  375 (400)
                      ....|+..+. ..+.++...+++|.+ ++++        ...+.+..+++.-+.-+.+.+++..+.+++++..-++|..+
T Consensus       227 ~s~~f~~~d~~~~~rv~g~i~l~g~l-aF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i  305 (349)
T KOG1443|consen  227 SSSIFRFQDTGLILRVIGLISLGGLL-AFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAI  305 (349)
T ss_pred             hhhHHHhcCccHHHHHHHHHHHHHHH-HHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHH
Confidence            2222222221 234444444445533 2222        23455555666667778899999999999999999999999


Q ss_pred             HHHHHHHhccC
Q psy11593        376 VMCSVFLYSRT  386 (400)
Q Consensus       376 Vi~gv~ly~~~  386 (400)
                      ...|+.+|..+
T Consensus       306 ~~agi~~~~~~  316 (349)
T KOG1443|consen  306 CLAGILLHRNE  316 (349)
T ss_pred             HHHHHHHhccC
Confidence            99999999554

>KOG2765|consensus

Probab=99.46  E-value=4e-12  Score=122.77  Aligned_cols=221  Identities=15%  Similarity=0.152  Sum_probs=155.7

Q ss_pred             HHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcc
Q psy11593        161 VPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADF  240 (400)
Q Consensus       161 i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~  240 (400)
                      .-+.+-+++|+....|+.+.+++..+++.++.-+||..++.+|.+||+++.+.+++++.+.||+++...+..++  ++..
T Consensus       164 ~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~--~~~~  241 (416)
T KOG2765|consen  164 FFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN--SDLP  241 (416)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc--ccCC
Confidence            33556789999999999999999999999999999999999999999999999999999999999987765321  1123


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHH---HHHhhcCchhhhccccccchHHHH
Q psy11593        241 VENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAAC---TCFISDWDKIFQHGFFYNYTWFIV  317 (400)
Q Consensus       241 ~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~---~~~~~~~~~i~~~~~~~~~~~~~~  317 (400)
                      ......|.++.+++|+++|++.+..+|-..+++....++ +.+++.|..-.++   ..++.+.-..+.   |.-.+....
T Consensus       242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~-lffGfvGLfnllllwP~l~iL~~~~~e~---F~lP~~~q~  317 (416)
T KOG2765|consen  242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQ-LFFGFVGLFNLLLLWPPLIILDFFGEER---FELPSSTQF  317 (416)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHH-HHHHHHHHHHHHHHhHHHHHHHHhccCc---ccCCCCcee
Confidence            345689999999999999999999998766654222222 3334444332222   222111100011   111111111


Q ss_pred             HHHHHHHHHH-----HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCC
Q psy11593        318 FLVLLNASGG-----LIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP  387 (400)
Q Consensus       318 l~i~~~al~g-----~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~  387 (400)
                      ..++...+-+     .+.+..+-..++.+....-+++++++.+...++-|.++|+.+++|.+.|++|.++.+...
T Consensus       318 ~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  318 SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            1222222222     333344455677777777778899999999999999999999999999999988877653

>KOG1582|consensus

Probab=99.46  E-value=3.5e-12  Score=118.11  Aligned_cols=225  Identities=15%  Similarity=0.094  Sum_probs=169.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccC
Q psy11593        156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA  235 (400)
Q Consensus       156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~  235 (400)
                      |.-|.+.+++....+.+..-++.|++.++..+...++.+.+.+.+.++=|+|+.+.++.+..+..+|++.....|...  
T Consensus       106 ~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~--  183 (367)
T KOG1582|consen  106 WRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT--  183 (367)
T ss_pred             hhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc--
Confidence            334899999999999999999999999999999999999999999999999999999999999999999998876643  


Q ss_pred             CCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHH
Q psy11593        236 RPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWF  315 (400)
Q Consensus       236 ~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~  315 (400)
                          +......|..++-+|-++.|+-+-.+||.+|..+.+.....+.-+..|.++.+..+.. .++-.+...+...++..
T Consensus       184 ----sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvl-Tge~f~a~~fcaehp~~  258 (367)
T KOG1582|consen  184 ----SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVL-TGELFSAWTFCAEHPVR  258 (367)
T ss_pred             ----CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHh-cccchhhhHHHHhCcHh
Confidence                2345678999999999999999999999999765432111111223344444444432 33322223333333443


Q ss_pred             HHHHHHHHHH----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCC
Q psy11593        316 IVFLVLLNAS----GGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP  387 (400)
Q Consensus       316 ~~l~i~~~al----~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~  387 (400)
                      ++...+..++    |...+-..+|..++......++.+..+++++|+++|..++|..+.-|..+|+.|+++-.+++
T Consensus       259 tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  259 TYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            4444433332    33333345688889899999999999999999999999999999999999999999755544

>KOG1583|consensus

Probab=99.45  E-value=1.8e-13  Score=126.94  Aligned_cols=220  Identities=18%  Similarity=0.243  Sum_probs=152.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhc-CChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccccccc-C
Q psy11593        158 KVGVPALLYVIQNNLLYISASN-LDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEK-A  235 (400)
Q Consensus       158 ~~~i~a~l~~~~~~l~~~al~~-l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~-~  235 (400)
                      .|++...+++..|.+..+|+.+ +|.+...++++..++.+.+++|+++|+|++.+|+.++++..+|+++.......+. +
T Consensus        66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~  145 (330)
T KOG1583|consen   66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS  145 (330)
T ss_pred             hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence            3777778888899999999988 9999999999999999999999999999999999999999999999865433211 0


Q ss_pred             -----CCC---cccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhc------C-
Q psy11593        236 -----RPA---DFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISD------W-  300 (400)
Q Consensus       236 -----~~~---~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~------~-  300 (400)
                           +.+   .+.....+|+.+...+.+.+|..++|+|..+|+++. .|..++   ++.=.+.++..+...      + 
T Consensus       146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGK-h~~Eal---FytH~LsLP~Flf~~~div~~~~  221 (330)
T KOG1583|consen  146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGK-HWKEAL---FYTHFLSLPLFLFMGDDIVSHWR  221 (330)
T ss_pred             hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHH---HHHHHhccchHHHhcchHHHHHH
Confidence                 011   112234689999999999999999999999998753 222332   222222222222111      1 


Q ss_pred             -----ch--hhhccccccchHHHHHHHHHHHHHH-HHHHHHH---HhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhH
Q psy11593        301 -----DK--IFQHGFFYNYTWFIVFLVLLNASGG-LIVAVVV---KYADNILKGFATSLAIVLACVFQVYLFAFVITFQF  369 (400)
Q Consensus       301 -----~~--i~~~~~~~~~~~~~~l~i~~~al~g-~~~~~~~---k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~  369 (400)
                           +.  +...++.   -+..|..++...+.+ .|+-.++   ...++...+...+++..++.++|+..|++++++++
T Consensus       222 ~~~~se~~~~p~~g~~---vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h  298 (330)
T KOG1583|consen  222 LAFKSESYLIPLLGFK---VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWH  298 (330)
T ss_pred             HHhcCcceeccccCcc---ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHH
Confidence                 10  0011111   123444444444433 2222222   12344555556677889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhc
Q psy11593        370 IVGAFFVMCSVFLYS  384 (400)
Q Consensus       370 liG~~lVi~gv~ly~  384 (400)
                      |+|+++|.+|..+|.
T Consensus       299 ~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  299 WLGAALVFFGTLLFA  313 (330)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998886

>KOG1444|consensus

Probab=99.44  E-value=2.5e-11  Score=115.71  Aligned_cols=283  Identities=17%  Similarity=0.172  Sum_probs=182.6

Q ss_pred             HHhhHHHHHHHHccccCCCCcchHHHHH-HHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHH
Q psy11593         88 LQNAIVSLSMRYARMKNKDELFISSTGV-LMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLY  166 (400)
Q Consensus        88 ~~~~~~~l~~k~s~~~~~~~~~~~~~~v-f~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~  166 (400)
                      +.-..+.+.-|+.-+   .++|+..-.+ +.+.+...++ +.+..+.+-.+.+++          +++..+++.+++++|
T Consensus        22 ~sS~lm~vvNK~vls---~y~f~~~l~l~~~Q~l~s~~~-v~~lk~~~lv~~~~l----------~~~~~kk~~P~~~lf   87 (314)
T KOG1444|consen   22 LSSILMTVVNKIVLS---SYNFPMGLLLMLLQSLASVLV-VLVLKRLGLVNFRPL----------DLRTAKKWFPVSLLF   87 (314)
T ss_pred             HHHHHHHHHHHHHHh---cCCCcHHHHHHHHHHHHHHHH-HHHHHHhceeecCCc----------ChHHHHHHccHHHHH
Confidence            444556677788776   3566654443 4554443222 222222221112211          234455678889999


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchh
Q psy11593        167 VIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRML  246 (400)
Q Consensus       167 ~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~  246 (400)
                      .+.......++++++.+++.+++...|+.+++....|+|.|.++.-|.+++...+|......++..          ....
T Consensus        88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s----------f~~~  157 (314)
T KOG1444|consen   88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS----------FNLR  157 (314)
T ss_pred             HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce----------ecch
Confidence            999999999999999999999999999999999999999999999999999999999887665543          2334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHH-hhcCchhhhccccccchHHHHHHHHHHHH
Q psy11593        247 GFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCF-ISDWDKIFQHGFFYNYTWFIVFLVLLNAS  325 (400)
Q Consensus       247 G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~-~~~~~~i~~~~~~~~~~~~~~l~i~~~al  325 (400)
                      |..+++..+++.+...++.|+..+..+..-+-....-.+.+.+...+..+ ..|++++.. .+-...+...+..+..+.+
T Consensus       158 gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~-~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  158 GYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSL-NFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHh-hcccccchhHHHHHHHHHH
Confidence            89999999999999999999988764321111111112234444444332 334332211 1111112334444445455


Q ss_pred             HHHHHH----HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q psy11593        326 GGLIVA----VVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSKPKPPR  395 (400)
Q Consensus       326 ~g~~~~----~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~~~~~~  395 (400)
                      .|..+.    ++.++.++..-..........+.+...+++|++.++.-++|..+-++|..+|+....++.+.+|
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence            454443    3445556655555554444556666677779999999999999999999899887755544443

>KOG2766|consensus

Probab=99.31  E-value=8.6e-13  Score=121.20  Aligned_cols=215  Identities=14%  Similarity=0.136  Sum_probs=159.3

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCC
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPA  238 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~  238 (400)
                      |.+.|+.+.-+|++..-|.||++....+++-.-.+..+.+++|+|||.|+.+-|..|++++.+||+++..+|...++  .
T Consensus        81 Yilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd--~  158 (336)
T KOG2766|consen   81 YILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGD--R  158 (336)
T ss_pred             hhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecccc--c
Confidence            78889999999999999999999999999999999999999999999999999999999999999999887654321  1


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHH
Q psy11593        239 DFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVF  318 (400)
Q Consensus       239 ~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l  318 (400)
                      ....+...|+.+++++|-++|++++..|.+.|+-+.  ....-+++++|.+++.+-.+. +..++..    -+|++....
T Consensus       159 aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~--~elm~~lgLfGaIIsaIQ~i~-~~~~~~t----l~w~~~i~~  231 (336)
T KOG2766|consen  159 AGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADR--VELMGFLGLFGAIISAIQFIF-ERHHVST----LHWDSAIFL  231 (336)
T ss_pred             cCCCCCccCcEEEEecceeeeeccccHHHHHhcCcH--HHHHHHHHHHHHHHHHHHHhh-hccceee----EeehHHHHH
Confidence            123467889999999999999999999999887653  222335678888888776433 3222211    123333322


Q ss_pred             HHHHHHH----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhcc
Q psy11593        319 LVLLNAS----GGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSR  385 (400)
Q Consensus       319 ~i~~~al----~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~  385 (400)
                      .+. .++    ...+...++|..++..-+.....+-.++.++  ..||-+.+|...+..+.+..|.++|.-
T Consensus       232 yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  232 YLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             HHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence            222 122    1222233445555555555555566677766  678888999999999999999999853

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.30  E-value=3.9e-09  Score=97.38  Aligned_cols=213  Identities=15%  Similarity=0.041  Sum_probs=138.1

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccc
Q psy11593        154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVE  233 (400)
Q Consensus       154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~  233 (400)
                      +++....+-|+.....|.++|.+++.+|.+++..+-++.|+.++++    ..||..-.-|+++.  +.|+.++...+.+ 
T Consensus        69 ~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~----~sRr~~d~vwvaLA--vlGi~lL~p~~~~-  141 (292)
T COG5006          69 PQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALL----SSRRLRDFVWVALA--VLGIWLLLPLGQS-  141 (292)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHH----hccchhhHHHHHHH--HHHHHhheeccCC-
Confidence            4455567778888899999999999999999999999999999875    57777777776665  4555554332221 


Q ss_pred             cCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccch
Q psy11593        234 KARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYT  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~  313 (400)
                            .......|..+.+.++.||+.+-+.-+|.-+..+ .......-| ..+.++.++.-....+.     .++   +
T Consensus       142 ------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm-~vAaviv~Pig~~~ag~-----~l~---~  205 (292)
T COG5006         142 ------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGM-LVAALIVLPIGAAQAGP-----ALF---S  205 (292)
T ss_pred             ------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHH-HHHHHHHhhhhhhhcch-----hhc---C
Confidence                  1234568999999999999999888888764322 111111111 11222222211111111     122   1


Q ss_pred             HHHHHHHHHHHH-----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593        314 WFIVFLVLLNAS-----GGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS  388 (400)
Q Consensus       314 ~~~~l~i~~~al-----~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~  388 (400)
                      +......+..++     ...+=...++..+...-+...+++|.++.+.|++++||.+|..||+|.+.|+.+..-.+...+
T Consensus       206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence            222222222222     222223355667766666777889999999999999999999999999999998765444444


Q ss_pred             C
Q psy11593        389 S  389 (400)
Q Consensus       389 ~  389 (400)
                      |
T Consensus       286 ~  286 (292)
T COG5006         286 K  286 (292)
T ss_pred             C
Confidence            3

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.04  E-value=3.7e-09  Score=87.81  Aligned_cols=134  Identities=16%  Similarity=0.235  Sum_probs=107.8

Q ss_pred             HHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhH
Q psy11593         81 TSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVG  160 (400)
Q Consensus        81 l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  160 (400)
                      ++-++.+++++..+++.|.--+.     .+|...-++|.++.+.++..+.+..++....       .+  -++|.+.-..
T Consensus         6 ~~ALLsA~fa~L~~iF~KIGl~~-----vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-------~~--~~~k~~lfli   71 (140)
T COG2510           6 IYALLSALFAGLTPIFAKIGLEG-----VDPDFATTIRTIVILIFLLIVLLVTGNWQAG-------GE--IGPKSWLFLI   71 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccc-----cCccHHHHHHHHHHHHHHHHHHHhcCceecc-------cc--cCcceehhhh
Confidence            44556678888899999986542     3666677888888888877777766541111       01  1456666567


Q ss_pred             HHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeec
Q psy11593        161 VPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQL  228 (400)
Q Consensus       161 i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~  228 (400)
                      +.|+...+.+.++|.|++.-+++...-+..+.|+++++++++|||||++..+|+|+++..+|++++..
T Consensus        72 lSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          72 LSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            77788899999999999999999999999999999999999999999999999999999999998753

>KOG1442|consensus

Probab=99.02  E-value=2.1e-10  Score=106.70  Aligned_cols=218  Identities=15%  Similarity=0.146  Sum_probs=165.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcc
Q psy11593        161 VPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADF  240 (400)
Q Consensus       161 i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~  240 (400)
                      ..++.+.+......+.++|.+.+.+++-+++.-+|+.++++++||+|-+..-..+.++.++|--+=   .+.++    ..
T Consensus       107 plsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lG---vdqE~----~~  179 (347)
T KOG1442|consen  107 PLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLG---VDQEG----ST  179 (347)
T ss_pred             chhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheec---ccccc----cc
Confidence            335556666677788999999999999999999999999999999999988776665555554321   11110    11


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHH
Q psy11593        241 VENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLV  320 (400)
Q Consensus       241 ~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i  320 (400)
                      +.-...|.++.+.|++.-|+-.+|.+|.+...+...|...+....++.++.++.+.+ .|+--.-.+|.+.++.+.|...
T Consensus       180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~l-nge~~~v~~~~~l~a~~Fw~~m  258 (347)
T KOG1442|consen  180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLIL-NGEFQAVVGFPHLPAIKFWILM  258 (347)
T ss_pred             CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHH-cchHHHHcCcccchHHHHHHHH
Confidence            234568999999999999999999998776666678888888888887777665543 2321111334444567788888


Q ss_pred             HHHHHHHHHHHHHH----HhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593        321 LLNASGGLIVAVVV----KYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT  386 (400)
Q Consensus       321 ~~~al~g~~~~~~~----k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~  386 (400)
                      ...++.|..+.++.    |..++++.++..+..-..-.++++.+++|.-+..-|-|-.+|+.|...|++.
T Consensus       259 tLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~v  328 (347)
T KOG1442|consen  259 TLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLV  328 (347)
T ss_pred             HHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHH
Confidence            88888887777654    7778888888888888888999999999999999999999999999888754

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.02  E-value=5.5e-09  Score=86.90  Aligned_cols=76  Identities=21%  Similarity=0.403  Sum_probs=66.0

Q ss_pred             chhhHHHHHHH-HHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccccc
Q psy11593        156 TLKVGVPALLY-VIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVV  232 (400)
Q Consensus       156 ~~~~~i~a~l~-~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~  232 (400)
                      +......+++. ..++.++++|+++.| +...++.++.|+++++++++++|||+++++|.++++.++|++++..++.+
T Consensus        34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   34 WLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            33344445555 489999999999999 58889999999999999999999999999999999999999999877654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.01  E-value=1.4e-08  Score=88.50  Aligned_cols=139  Identities=20%  Similarity=0.250  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCC-----CchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhc--cccc-cc--hHHH
Q psy11593        247 GFAATILACLLSGLAGVYFEMILKGS-----DVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQH--GFFY-NY--TWFI  316 (400)
Q Consensus       247 G~l~~l~aa~~~al~~V~~ekllk~~-----~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~--~~~~-~~--~~~~  316 (400)
                      |.++++.+.++.|+..++.|+++++.     ..+.......+...+.++.++.++..|+....+.  .... ..  +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67889999999999999999999873     3334434444556666666665554443321111  0111 00  1222


Q ss_pred             HHHHHHHHH----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhcc
Q psy11593        317 VFLVLLNAS----GGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSR  385 (400)
Q Consensus       317 ~l~i~~~al----~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~  385 (400)
                      +..++..++    .......++++.+++..+....+..++..++|+++|||++|..+++|.++.+.|+++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            333333232    333345678999999999999999999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.01  E-value=1.2e-08  Score=92.36  Aligned_cols=235  Identities=15%  Similarity=0.154  Sum_probs=158.2

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccccccc
Q psy11593        155 DTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEK  234 (400)
Q Consensus       155 ~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~  234 (400)
                      +...+.+++++.++..+...-+++|++.+.+++...+.++.+|.....++|.|++.....+.++.++.-++..++|....
T Consensus        67 ~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~  146 (309)
T COG5070          67 KAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQAS  146 (309)
T ss_pred             hhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHH
Confidence            34456788888888888888899999999999999999999999999999999999999999999988887777665321


Q ss_pred             CCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHH-HhhcCchhhhccccccc-
Q psy11593        235 ARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTC-FISDWDKIFQHGFFYNY-  312 (400)
Q Consensus       235 ~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~-~~~~~~~i~~~~~~~~~-  312 (400)
                         .........|.+++..-|+.++..-...||..|-.+..-.-..+.-...+.+..+... +.+||.+.   +.-++. 
T Consensus       147 ---~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~---n~annl~  220 (309)
T COG5070         147 ---AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG---NLANNLS  220 (309)
T ss_pred             ---HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc---hhhcCCC
Confidence               0011244578888899999888877777776653211000011111233444444333 34666532   112222 


Q ss_pred             -hHHHHHHHHHHHHHH--HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593        313 -TWFIVFLVLLNASGG--LIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS  389 (400)
Q Consensus       313 -~~~~~l~i~~~al~g--~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~  389 (400)
                       +...|+.+....-.|  .+-+++.+..++..-+...++...-..+.|.++|||+.+...+....+=..+..+|...+.+
T Consensus       221 ~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         221 VDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             hHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence             234455443322222  22345667777777777777777788899999999999999998888877776777766555


Q ss_pred             CCCCCC
Q psy11593        390 KPKPPR  395 (400)
Q Consensus       390 ~~~~~~  395 (400)
                      +...||
T Consensus       301 k~q~q~  306 (309)
T COG5070         301 KQQNQK  306 (309)
T ss_pred             HHhcCC
Confidence            444444

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.95  E-value=4.9e-09  Score=87.33  Aligned_cols=122  Identities=18%  Similarity=0.157  Sum_probs=93.9

Q ss_pred             HhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHH-HH
Q psy11593         89 QNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALL-YV  167 (400)
Q Consensus        89 ~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l-~~  167 (400)
                      .|+...+..|...++     +++....+.+.+...+ .+.+....++.+...          .+++++......+++ ..
T Consensus         2 ~~a~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~   65 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKK-----ISPLSITFWRFLIAGI-LLILLLILGRKPFKN----------LSPRQWLWLLFLGLLGTA   65 (126)
T ss_pred             eeeeHHHHHHHHhcc-----CCHHHHHHHHHHHHHH-HHHHHHhhccccccC----------CChhhhhhhhHhhcccee
Confidence            467777788876642     5788888998888775 444333322211110          123444555666666 58


Q ss_pred             HHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593        168 IQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV  226 (400)
Q Consensus       168 ~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv  226 (400)
                      +.+.+.++|+++++++..+++.++.|+++++++++++||++++++|.|+++.+.|++++
T Consensus        66 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   66 LAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4314|consensus

Probab=98.86  E-value=5.5e-08  Score=86.71  Aligned_cols=207  Identities=13%  Similarity=0.228  Sum_probs=141.2

Q ss_pred             HHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccc
Q psy11593        163 ALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVE  242 (400)
Q Consensus       163 a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~  242 (400)
                      +++.++.|+++..|+..++++.++.+..+.-.|+-+++++.||+|+...+.++.++...|++++.+.+..        +.
T Consensus        60 ~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~--------~a  131 (290)
T KOG4314|consen   60 SIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE--------HA  131 (290)
T ss_pred             EEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch--------hh
Confidence            4567889999999999999999999999999999999999999999999999999999999999877654        35


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhCC---CchHHHHHHHHHHhHHHHH----HHHHHhhcCchhhhccccccchHH
Q psy11593        243 NRMLGFAATILACLLSGLAGVYFEMILKGS---DVSIWMRNVQLSLLSLPCA----ACTCFISDWDKIFQHGFFYNYTWF  315 (400)
Q Consensus       243 ~~~~G~l~~l~aa~~~al~~V~~ekllk~~---~~~~~~~~~~l~~~g~~~~----l~~~~~~~~~~i~~~~~~~~~~~~  315 (400)
                      ...+|+..++.+++.+|++.|..++.....   +.+.++..  +.++-..+.    ++..+ ..-|+..      .+...
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~--LGF~NL~~~~~~~lIL~~-T~VE~~q------sFA~~  202 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSC--LGFFNLCFISFPALILAF-TGVEHLQ------SFAAA  202 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHH--HHHHHHHHHhhhHHHHHH-hchHHHH------HHhhC
Confidence            678999999999999999999998877543   22222221  222222211    11111 1111111      01111


Q ss_pred             HHHHHHHHHH----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593        316 IVFLVLLNAS----GGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT  386 (400)
Q Consensus       316 ~~l~i~~~al----~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~  386 (400)
                      .|.-.+..+.    ....+.+-+-...++..+.-..++++..+.+..++-+-..+..++.|.++|..|..+.-.+
T Consensus       203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP  277 (290)
T KOG4314|consen  203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIP  277 (290)
T ss_pred             CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecc
Confidence            2222221111    2222223334445555555666667777888888777788889999999999997654433

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.70  E-value=1.1e-06  Score=83.46  Aligned_cols=217  Identities=14%  Similarity=0.173  Sum_probs=140.2

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCccHHHHH----HHHHHHHhhheeec
Q psy11593        154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKISKIQWI----SLVILVVGVALVQL  228 (400)
Q Consensus       154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erls~~qwl----al~l~~~GVviv~~  228 (400)
                      +.++.-.+.+++..+.+..+|.+.+++..+...=+. ..+.+.++++++++++|--+..+|+    |+++..+|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            334456777889999999999999998877666555 6888999999999999998888876    88888999988877


Q ss_pred             ccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccc
Q psy11593        229 SSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGF  308 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~  308 (400)
                      .+..++  +.+...+.--|+...+++.+.+.++.+..+- .+-.+.+..  -.|  ..|.+++.........+     .+
T Consensus       123 ~~~~~~--~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~-~~~~~~~~~--lPq--aiGm~i~a~i~~~~~~~-----~~  190 (269)
T PF06800_consen  123 QDKKSD--KSSSKSNMKKGILALLISTIGYWIYSVIPKA-FHVSGWSAF--LPQ--AIGMLIGAFIFNLFSKK-----PF  190 (269)
T ss_pred             cccccc--ccccccchhhHHHHHHHHHHHHHHHHHHHHh-cCCChhHhH--HHH--HHHHHHHHHHHhhcccc-----cc
Confidence            665432  1112234556888899999999887776553 332221111  111  12333222211111111     12


Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccH----hHHHHHHHHHHHHHH
Q psy11593        309 FYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITF----QFIVGAFFVMCSVFL  382 (400)
Q Consensus       309 ~~~~~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~----~~liG~~lVi~gv~l  382 (400)
                      ++...+...+.-+.-+++.+.+.......+....-..+.+.++++.+.|.++|+|.=+.    ..++|.++|+.|..+
T Consensus       191 ~~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  191 FEKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             cccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            22222222222233355555555555555555555567788999999999999999775    467888888887643

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.55  E-value=2.9e-06  Score=80.28  Aligned_cols=133  Identities=10%  Similarity=-0.022  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593         77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT  156 (400)
Q Consensus        77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~  156 (400)
                      ..+.++.++.++.|+...+..|...++.   +.++.+....+.++..++.++.....++ +..           .+++++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~-----------~~~~~~  191 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKE---GPELLQFTGWVLLLGALLLLPFAWFLGP-NPQ-----------ALSLQW  191 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcC---CchHHHHHHHHHHHHHHHHHHHHHhcCC-CCC-----------cchHHH
Confidence            4577888888999999999988876431   1112222223344444444444433222 111           012333


Q ss_pred             hhhHHHHHH-HHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhh
Q psy11593        157 LKVGVPALL-YVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVA  224 (400)
Q Consensus       157 ~~~~i~a~l-~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVv  224 (400)
                      ......+++ ..+...++++++++.+++..+++..+.|+++++++++++||++++.+|.|..+.+.|++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       192 GALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            333444444 57888999999999999999999999999999999999999999999999999999974

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.54  E-value=3.7e-06  Score=73.05  Aligned_cols=147  Identities=17%  Similarity=0.214  Sum_probs=105.6

Q ss_pred             HHHHHHHHHHhhHHHHHHHHcccc--CCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhh-hcccCcccc
Q psy11593         80 TTSLITLTLQNAIVSLSMRYARMK--NKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRA-HTIQNPLDT  156 (400)
Q Consensus        80 ~l~l~ll~~~~~~~~l~~k~s~~~--~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~-~~~~~~~~~  156 (400)
                      +++.+...+..+...+..|...++  .+++..++.+..+.......++.++.....++.+.........+ +....++.+
T Consensus         2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T PF03151_consen    2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI   81 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence            344555666667777777765543  12456788888888888888777776554443221111111111 000022334


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593        157 LKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV  226 (400)
Q Consensus       157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv  226 (400)
                      ......+++....|...|..++++++.+.+++...|.+.+.++++++++|+++..++.|+++.++|+++-
T Consensus        82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            4467778888999999999999999999999999999999999999999999999999999999999764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.51  E-value=1.3e-06  Score=72.61  Aligned_cols=125  Identities=15%  Similarity=0.170  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHHHHHHHHHHHHHH
Q psy11593        256 LLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVK  335 (400)
Q Consensus       256 ~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~~al~g~~~~~~~k  335 (400)
                      ++||...++.|+..++.+ +.. ........+.+ .++.....+.++..... ...+-......++..+++..+....++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLS-ITFWRFLIAGI-LLILLLILGRKPFKNLS-PRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHH-HHHHHHHHHHH-HHHHHHhhccccccCCC-hhhhhhhhHhhccceehHHHHHHHHHH
Confidence            357788889999888743 222 33333333433 22222222211100000 000111122222234556666778889


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593        336 YADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS  384 (400)
Q Consensus       336 ~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~  384 (400)
                      +.++...+...+++|+++.++++++++|+++..+++|.++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999987643

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.45  E-value=2.1e-06  Score=71.57  Aligned_cols=127  Identities=15%  Similarity=0.225  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCchH--HHHHHHHHHhHHHHHHHHHHhh-cCchhhhccccccchHHHHHHHHHH-
Q psy11593        248 FAATILACLLSGLAGVYFEMILKGSDVSI--WMRNVQLSLLSLPCAACTCFIS-DWDKIFQHGFFYNYTWFIVFLVLLN-  323 (400)
Q Consensus       248 ~l~~l~aa~~~al~~V~~ekllk~~~~~~--~~~~~~l~~~g~~~~l~~~~~~-~~~~i~~~~~~~~~~~~~~l~i~~~-  323 (400)
                      ..+++++|+++++..++.|--+++.|...  .++++.    ...+.....+.. .++...      ..+...|+.+..+ 
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiV----i~~~l~~v~~~~g~~~~~~------~~~~k~~lflilSG   74 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIV----ILIFLLIVLLVTGNWQAGG------EIGPKSWLFLILSG   74 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHH----HHHHHHHHHHhcCceeccc------ccCcceehhhhHHH
Confidence            45679999999999998776666554322  233322    222222222221 111110      1233344443333 


Q ss_pred             ---HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593        324 ---ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS  384 (400)
Q Consensus       324 ---al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~  384 (400)
                         +++.+++.+.+|.-++....+.+..++++++++|++++||++|..+++|+.+|++|+.+..
T Consensus        75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence               2333455556677777777888999999999999999999999999999999999986644

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.37  E-value=1.8e-06  Score=71.67  Aligned_cols=68  Identities=13%  Similarity=0.271  Sum_probs=62.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheee
Q psy11593        160 GVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQ  227 (400)
Q Consensus       160 ~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~  227 (400)
                      +..-++|.+...++..+++.+|.+.+..+.++.++++++++++++|||++++||+|+.+.++|++++.
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            33336688999999999999999999999999999999999999999999999999999999998774

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.34  E-value=0.00054  Score=67.69  Aligned_cols=176  Identities=11%  Similarity=0.032  Sum_probs=113.3

Q ss_pred             hhhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCc
Q psy11593         74 RAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNP  153 (400)
Q Consensus        74 ~~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~  153 (400)
                      ++...+++..++..+.|++..+-.|..++. +-|.|+.     ...++.++++....-...-+.+....++      .++
T Consensus         3 ~~~~~G~~~~~i~~~~~GS~~~p~K~~k~w-~wE~~W~-----v~gi~~wl~~~~~~g~~~~~~f~~~~~~------~~~   70 (345)
T PRK13499          3 NAIILGIIWHLIGGASSGSFYAPFKKVKKW-SWETMWS-----VGGIFSWLILPWLIAALLLPDFWAYYSS------FSG   70 (345)
T ss_pred             chhHHHHHHHHHHHHHhhcccccccccCCC-chhHHHH-----HHHHHHHHHHHHHHHHHHhhhHHHHHHh------cCH
Confidence            346788999999999999999999987653 2334432     1222333333321111110122221111      123


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCc-------cHHHHHHHHHHHHhhhe
Q psy11593        154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKI-------SKIQWISLVILVVGVAL  225 (400)
Q Consensus       154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erl-------s~~qwlal~l~~~GVvi  225 (400)
                      +.+..-.+.+++..+.+..++.+++++..+...-+. .++.+..+++..++++|=-       ...-.+|+++.++|+++
T Consensus        71 ~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l  150 (345)
T PRK13499         71 STLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAI  150 (345)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHH
Confidence            344445667888999999999999999988776555 5888999999999987532       34456788888899988


Q ss_pred             eec----ccccccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy11593        226 VQL----SSVVEKARPADFVENRMLGFAATILACLLSGLAG  262 (400)
Q Consensus       226 v~~----~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~  262 (400)
                      ...    .+.+.+++ +..+.+.--|++.++++.+.+++.+
T Consensus       151 ~s~Ag~~k~~~~~~~-~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        151 VGRAGQLKERKMGIK-KAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             HHHhhhhcccccccc-cccccchHhHHHHHHHHHHHHHHHH
Confidence            877    33221100 0123456789999999999999877

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.30  E-value=9.7e-06  Score=78.95  Aligned_cols=66  Identities=18%  Similarity=0.313  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593        164 LLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS  229 (400)
Q Consensus       164 ~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~  229 (400)
                      +++.++..+.+.|+.+.|++..+=+.....++.++++.+++|||+++++|.|.++.++|.+++..-
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            457788899999999999999999999999999999999999999999999999999999877543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.22  E-value=5e-05  Score=75.69  Aligned_cols=151  Identities=15%  Similarity=0.206  Sum_probs=100.4

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHccccCC--CCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhccc-Cc
Q psy11593         77 MLKTTSLITLTLQNAIVSLSMRYARMKNK--DELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQ-NP  153 (400)
Q Consensus        77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~--~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~-~~  153 (400)
                      ..+.++.++..+.|+...+..|...++.+  ++++++...-...-.+..++++++....+................. ..
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            45788888888999999888887654321  2245555454444455555555554422211111100000000000 00


Q ss_pred             cc-chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheee
Q psy11593        154 LD-TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQ  227 (400)
Q Consensus       154 ~~-~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~  227 (400)
                      .. .......++.|.+.|.+.|++++++++.++++....+|+++.++++++++|+++..|++|.++.+.|+.+.+
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            00 112344567788999999999999999999999999999999999999999999999999999999997653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.21  E-value=1.9e-05  Score=76.83  Aligned_cols=148  Identities=14%  Similarity=0.074  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhc-ccCccc
Q psy11593         77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHT-IQNPLD  155 (400)
Q Consensus        77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~-~~~~~~  155 (400)
                      ..+.+..++..+.|+...+..|...++   +++++.+..+.......+..+++....+......  ....... ...+..
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~--~~~~~~~~~~~~~~  218 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTI---KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLP--HGFMQAISGVNVTK  218 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHH--HHHHHhhcccCchH
Confidence            457777778888898888888765431   2456666666666555555555544332211110  0000000 001111


Q ss_pred             chh-hHHHHH-HHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593        156 TLK-VGVPAL-LYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS  229 (400)
Q Consensus       156 ~~~-~~i~a~-l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~  229 (400)
                      .+. ....+. ++...|.+.|.++++++++++++....+|+++++++++++||+++..|++|.++.++|+.+.+..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~  294 (302)
T TIGR00817       219 IYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV  294 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            111 223333 45666678889999999999999999999999999999999999999999999999999887654

specificities overlap.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.17  E-value=5.2e-05  Score=73.57  Aligned_cols=135  Identities=16%  Similarity=0.101  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593         77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT  156 (400)
Q Consensus        77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~  156 (400)
                      ..+.++.++.++.|+...+..|...++     +++... ....++..++..+....... ...           .++..+
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-----~~~~~~-~~~~~~~~~~l~~~~~~~~~-~~~-----------~~~~~~  208 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAE-----HGPATV-AIGSLIAALIFVPIGALQAG-EAL-----------WHWSIL  208 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCchHH-HHHHHHHHHHHHHHHHHccC-ccc-----------CCHHHH
Confidence            357778888889999999888876543     122222 22223322232332222211 000           011111


Q ss_pred             hhhHHHHHH-HHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593        157 LKVGVPALL-YVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS  229 (400)
Q Consensus       157 ~~~~i~a~l-~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~  229 (400)
                      ......+++ -.++..++++++++.+++.++++..+.|++.++++++++||++++.||+|.++.++|++.....
T Consensus       209 ~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        209 PLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            112233433 4677889999999999999999999999999999999999999999999999999999887544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.17  E-value=4.5e-05  Score=74.07  Aligned_cols=134  Identities=13%  Similarity=-0.001  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593         77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT  156 (400)
Q Consensus        77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~  156 (400)
                      ..+.++.++.++.|+...+..|...++.     ++.+..+..  ... +..+....... ....          .++..+
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~-----~~~~~~~~~--~~~-~l~~~~~~~~~-~~~~----------~~~~~~  215 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARGK-----NGITLFFIL--TAL-ALWIKYFLSPQ-PAMV----------FSLPAI  215 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCC-----CchhHHHHH--HHH-HHHHHHHHhcC-cccc----------CCHHHH
Confidence            4577888888999999999888875431     222222211  111 11111111211 1100          112223


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593        157 LKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS  229 (400)
Q Consensus       157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~  229 (400)
                      ......++...+...+++++++++|++..+++..+.|++.++++++++||+++..||+|.++.+.|+++....
T Consensus       216 ~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        216 IKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            3334444556678899999999999999999999999999999999999999999999999999999877543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.13  E-value=7.5e-05  Score=71.92  Aligned_cols=130  Identities=8%  Similarity=-0.042  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhc-CchhhhccccccchHHHHHH--HHHHH
Q psy11593        248 FAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISD-WDKIFQHGFFYNYTWFIVFL--VLLNA  324 (400)
Q Consensus       248 ~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~-~~~i~~~~~~~~~~~~~~l~--i~~~a  324 (400)
                      +++.+++++++|...+..|+..++++.  . + ......+.+..++...... +.....    ....++.+..  ....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~--~-~-~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~   74 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPD--F-L-WWALLAHSVLLTPYGLWYLAQVGWSR----LPATFWLLLAISAVANM   74 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhH--H-H-HHHHHHHHHHHHHHHHHhcccCCCCC----cchhhHHHHHHHHHHHH
Confidence            467789999999999999977665422  1 1 2222223333333222210 111000    0111221221  12233


Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhcc
Q psy11593        325 SGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSR  385 (400)
Q Consensus       325 l~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~  385 (400)
                      .+..+....+++.+........+..|+++.++++++++|+++..+++|.++++.|+.+...
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            4445556677888888888889999999999999999999999999999999999876543

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.10  E-value=8.1e-05  Score=74.35  Aligned_cols=65  Identities=12%  Similarity=0.112  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593        166 YVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS  230 (400)
Q Consensus       166 ~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~  230 (400)
                      -.+...++++++++++++..++...+.|+++++++++++||++++.+++|.++.++|+.++..+.
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            34567789999999999999999999999999999999999999999999999999999987543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.09  E-value=0.00024  Score=60.48  Aligned_cols=121  Identities=15%  Similarity=0.078  Sum_probs=82.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHHH
Q psy11593        246 LGFAATILACLLSGLAGVYFEMILKGSDV-SIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNA  324 (400)
Q Consensus       246 ~G~l~~l~aa~~~al~~V~~ekllk~~~~-~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~~a  324 (400)
                      .|.++++.+.++.+.+-+..|+-.++.+. +...       .. . ..... ..           . ...+.++.++..+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~-------~~-~-~~~~~-~~-----------~-p~~~i~lgl~~~~   59 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAW-------DF-I-AALLA-FG-----------L-ALRAVLLGLAGYA   59 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchh-------HH-H-HHHHH-Hh-----------c-cHHHHHHHHHHHH
Confidence            36788889999999888888877665431 1100       00 0 00000 00           0 0124556666666


Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--HhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593        325 SGGLIVAVVVKYADNILKGFATSLAIVLACVFQVY--LFAFVITFQFIVGAFFVMCSVFLYSRTPS  388 (400)
Q Consensus       325 l~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~l--lfge~~t~~~liG~~lVi~gv~ly~~~~~  388 (400)
                      ++..+..++++..|........+...++..+.++.  +|||++|+.+++|.++|++|+++.++.++
T Consensus        60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            66677788889988877777766666677777775  89999999999999999999999876544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.08  E-value=8.3e-05  Score=72.07  Aligned_cols=136  Identities=15%  Similarity=0.132  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593         77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT  156 (400)
Q Consensus        77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~  156 (400)
                      ..+.+..++..+.|+...+..|.....      .+.......-.+...+..++...... ....         ..++..+
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~  212 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPLP------VGMMAGAAEMLAAGVVLLIASLLSGE-RLTA---------LPTLSGF  212 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCC------cchHHHHHHHHHHHHHHHHHHHHcCC-cccc---------cCCHHHH
Confidence            356777777788888888777664421      11112222222222222222222211 1100         0011233


Q ss_pred             hhhHHHHHH-HHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeec
Q psy11593        157 LKVGVPALL-YVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQL  228 (400)
Q Consensus       157 ~~~~i~a~l-~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~  228 (400)
                      ......+++ ..+...++++++++++++..+++..+.|++.++++++++||++++.+|+|.++.+.|+.+...
T Consensus       213 ~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        213 LALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            333444443 457788999999999999999999999999999999999999999999999999999988754

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.95  E-value=0.00035  Score=67.90  Aligned_cols=147  Identities=10%  Similarity=0.046  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593         77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT  156 (400)
Q Consensus        77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~  156 (400)
                      ..+.++.++..+.|+...+..|...++.  .+.......+....+..+..........+.....  . .+..  .++..+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~--~~~~~~  214 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHS--TRPAVMSLVVWSALIPIIPFFVASLILDGSATMI--H-SLVT--IDMTTI  214 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccc--CccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh--h-hhcc--CCHHHH
Confidence            3577788888889999998888754321  1112222222222222221111111112100000  0 0000  122233


Q ss_pred             hhhHHHHH-HHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593        157 LKVGVPAL-LYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS  230 (400)
Q Consensus       157 ~~~~i~a~-l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~  230 (400)
                      ......++ .-.++..+++.++++++++..+.+..+.|++.++++++++||+++..||+|.++.++|+.+...+.
T Consensus       215 ~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        215 LSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            33333333 345677889999999999999999999999999999999999999999999999999998775543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.94  E-value=0.00051  Score=66.73  Aligned_cols=137  Identities=11%  Similarity=0.084  Sum_probs=87.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcC-chhhhccccccchHHHH--HH
Q psy11593        243 NRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDW-DKIFQHGFFYNYTWFIV--FL  319 (400)
Q Consensus       243 ~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~-~~i~~~~~~~~~~~~~~--l~  319 (400)
                      +...|.+++++++++||...++.|.. .+.+ +....... ..++.++.++....... +.... . +.......+  ..
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R-~~~a~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~   79 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHR-VIWSFFFMVVLMSICRQWSYLKT-L-IQTPQKIFMLAVS   79 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHH-HHHHHHHHHHHHHHHccHHHHHH-H-HcCHHHHHHHHHH
Confidence            44579999999999999999999653 3322 22222223 23343333332222211 11000 0 111111112  22


Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593        320 VLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS  384 (400)
Q Consensus       320 i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~  384 (400)
                      .+..+....+..+.+++.+....+...++.|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            23334455566677899999999999999999999999999999999999999999999987643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.80  E-value=0.00032  Score=58.84  Aligned_cols=69  Identities=14%  Similarity=0.210  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCC
Q psy11593        322 LNASGGLIVAVVVKYADNILK-GFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSK  390 (400)
Q Consensus       322 ~~al~g~~~~~~~k~~~ai~~-~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~  390 (400)
                      ..++.-.+.+.++|+.+-... +..+....+.+.++|+++|+|++|+.+++|.++|+.|+...+...++.
T Consensus        39 ~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~  108 (120)
T PRK10452         39 MISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKA  108 (120)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence            334444556677777663222 233457788999999999999999999999999999998776655433

>TIGR00688 rarD rarD protein

Probab=97.80  E-value=0.0013  Score=62.35  Aligned_cols=134  Identities=13%  Similarity=0.098  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhh-cCchh-hhccccccchHHHHHH--HHH
Q psy11593        247 GFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFIS-DWDKI-FQHGFFYNYTWFIVFL--VLL  322 (400)
Q Consensus       247 G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~-~~~~i-~~~~~~~~~~~~~~l~--i~~  322 (400)
                      |..++++++++||...+..|. ..+.  +.......=.+++.++.++..... +++.. +.....+.........  .+.
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~-~~~~--~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKL-LKPL--PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHH-hccC--CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            788899999999999999886 3332  222222211223333322222111 11110 0000000011111111  112


Q ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHh
Q psy11593        323 NASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLY  383 (400)
Q Consensus       323 ~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly  383 (400)
                      .+....+..+.+++.+....+...++.|+++.++++++++|+++..+++|.++.++|+.+.
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            3344455666788888888888899999999999999999999999999999999998654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.79  E-value=0.00014  Score=61.96  Aligned_cols=71  Identities=13%  Similarity=0.123  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHH--HhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593        160 GVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAII--LLKKKISKIQWISLVILVVGVALVQLSS  230 (400)
Q Consensus       160 ~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~--~L~erls~~qwlal~l~~~GVviv~~~~  230 (400)
                      ...-++|.++..++.++++.+|++.+.-+.+..+..+++.++.  ++||++++.||+|+++.++|++++..++
T Consensus        52 ~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         52 LLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            3444678999999999999999999999999888888888885  8999999999999999999999986543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.74  E-value=0.0002  Score=60.10  Aligned_cols=72  Identities=15%  Similarity=0.333  Sum_probs=64.2

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS  230 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~  230 (400)
                      ..+..++|.++..+...+++++|.+.+-.+. ....+.+++.+++++||++++.|++++.+.++|++.+...+
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            4556678999999999999999999887775 69999999999999999999999999999999999886544

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.63  E-value=0.00036  Score=57.68  Aligned_cols=71  Identities=11%  Similarity=0.170  Sum_probs=62.6

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHH-hhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQVT-YQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS  229 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll-~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~  229 (400)
                      ....-++|.++..+...+++.+|.+.+-.+ .....+.+++.+++++||++++.|++++.+.++|++.+...
T Consensus        33 ~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            345567788999999999999999888777 45899999999999999999999999999999999988543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.63  E-value=0.00046  Score=56.55  Aligned_cols=70  Identities=21%  Similarity=0.318  Sum_probs=61.2

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeec
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQL  228 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~  228 (400)
                      ..+..++|..+..+...+++.+|.+++-.+- ....+.+++.+++++||++++.|++++.+.++|++.+..
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            4555678899999999999999988766555 499999999999999999999999999999999998743

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.59  E-value=0.00045  Score=56.29  Aligned_cols=70  Identities=19%  Similarity=0.308  Sum_probs=60.9

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHH-HHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeec
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQ-VTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQL  228 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~-ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~  228 (400)
                      ...-.++|.++..+.-.|++++|.+++- +-...-.+.+++.+++++||+++..|++++.+.++|++.+..
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            4555677888999999999999987755 455689999999999999999999999999999999987744

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.58  E-value=0.0007  Score=65.70  Aligned_cols=131  Identities=15%  Similarity=0.170  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccch
Q psy11593         78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTL  157 (400)
Q Consensus        78 ~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~  157 (400)
                      .+.+..++..+.++...+..|....       ++.+.++....--++.+..+....++ . ++.          .++..+
T Consensus       152 ~Gi~~~l~sg~~y~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~~~-~-~~~----------~~~~~~  212 (290)
T TIGR00776       152 KGILLLLMSTIGYLVYVVVAKAFGV-------DGLSVLLPQAIGMVIGGIIFNLGHIL-A-KPL----------KKYAIL  212 (290)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcCC-------CcceehhHHHHHHHHHHHHHHHHHhc-c-cch----------HHHHHH
Confidence            3777777788889999898887642       22222222222111122222221111 0 110          012223


Q ss_pred             hhHHHHHHHHHHHHHHHHHhh-cCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHH----HHHHHHHHhhheee
Q psy11593        158 KVGVPALLYVIQNNLLYISAS-NLDAATSQVTYQLKILTTAIFAIILLKKKISKIQW----ISLVILVVGVALVQ  227 (400)
Q Consensus       158 ~~~i~a~l~~~~~~l~~~al~-~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qw----lal~l~~~GVviv~  227 (400)
                      ...+.+++..+++.+++.+.+ +++++++.++.+..|+..++++++++||+.+++|+    +|.++.+.|+.++.
T Consensus       213 ~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       213 LNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            344477778889999999999 99999999999999999999999999999999999    99999999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.55  E-value=0.00087  Score=55.55  Aligned_cols=61  Identities=13%  Similarity=0.121  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593        324 ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS  384 (400)
Q Consensus       324 al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~  384 (400)
                      ++...+...+++..+........++.++++.++|+++|||++|..+++|.+++++|+.+..
T Consensus        48 ~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         48 GLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4455556778888887777666778999999999999999999999999999999987643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.54  E-value=0.00064  Score=56.06  Aligned_cols=69  Identities=17%  Similarity=0.301  Sum_probs=60.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593        158 KVGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV  226 (400)
Q Consensus       158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv  226 (400)
                      ...+..++|.++..+...+++++|.+++-.+- ....+.+++.+++++||++++.|++++.+.+.|++.+
T Consensus        37 ~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         37 YGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            34555677889999999999999988765554 5889999999999999999999999999999999876

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.50  E-value=0.0022  Score=62.49  Aligned_cols=142  Identities=16%  Similarity=0.219  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHH--hcCCchhhhHHHhhhhcccCcccc
Q psy11593         79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFA--DEGFHVGRFINLVRAHTIQNPLDT  156 (400)
Q Consensus        79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~--~~~~~~~~~~~~l~~~~~~~~~~~  156 (400)
                      +++++++..+..+......+...++   ++.++.+.++..+++.+.+.++....  .+  +..+..+..    ...|.-+
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~---~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~--~~~~~~~f~----~~~p~~~  225 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKK---YGKSPWELMFYTNLFSLPFLLILLFLLPTG--EFRSAIRFI----SAHPSVL  225 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---hCCcHHHHHHHHHHHHHHHHHHHHHHHHhh--HhhHHHHHH----HHhHHHH
Confidence            7888888888888887777665543   23366888999999988887766655  22  122211111    1233333


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593        157 LKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS  229 (400)
Q Consensus       157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~  229 (400)
                      .....-++..+....+.+.-.+..++.+.+++..++-+++.+++.+++++++++.||.|+++.+.|..+-..+
T Consensus       226 ~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~  298 (303)
T PF08449_consen  226 LYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA  298 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence            3345556666666677778889999999999999999999999999999999999999999999999875443

; GO: 0055085 transmembrane transport

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.37  E-value=0.0014  Score=63.99  Aligned_cols=117  Identities=13%  Similarity=0.127  Sum_probs=84.2

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHH
Q psy11593        243 NRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLL  322 (400)
Q Consensus       243 ~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~  322 (400)
                      +..+|..+++.++++.+.+..++||-.++.+....                    .+++.  ..+++  -+..+|..++.
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~--------------------~~~~~--~~~~l--~~~~W~~G~~~   59 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSL--------------------RAGSG--GRSYL--RRPLWWIGLLL   59 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--------------------cccch--hhHHH--hhHHHHHHHHH
Confidence            56789999999999999999999987665321000                    00000  00011  12334444444


Q ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHh
Q psy11593        323 NASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLY  383 (400)
Q Consensus       323 ~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly  383 (400)
                      .++|...-...+.+++....++...++.+++.+++.++++|+++...++|.++++.|..+.
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li  120 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI  120 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence            4556555556778899999999999999999999999999999999999999999997543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.36  E-value=0.0048  Score=50.99  Aligned_cols=61  Identities=15%  Similarity=0.215  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593        325 SGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT  386 (400)
Q Consensus       325 l~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~  386 (400)
                      .+..+..+..++.++ .......+.|+++.++|+++|+|+++...++|.+++++|+.+-..+
T Consensus        47 ~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   47 VAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS  107 (113)
T ss_pred             HHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            445556677888885 5567778899999999999999999999999999999998776544

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.30  E-value=0.0053  Score=57.40  Aligned_cols=58  Identities=22%  Similarity=0.360  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhh
Q psy11593        167 VIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVA  224 (400)
Q Consensus       167 ~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVv  224 (400)
                      ++-..+-.++++.+|..++.++.++.|.+.++..+++|+|++|..||++++....+.+
T Consensus       221 alPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         221 ALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             ccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            4556778899999999999999999999999999999999999999999998888775

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.27  E-value=0.004  Score=51.47  Aligned_cols=64  Identities=14%  Similarity=0.257  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCC
Q psy11593        324 ASGGLIVAVVVKYADNILK-GFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP  387 (400)
Q Consensus       324 al~g~~~~~~~k~~~ai~~-~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~  387 (400)
                      ++.-.+.+.++|..+-... +.-+....+.++++|+++|||++|+.+++|.++|++|+...+...
T Consensus        41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3333445566666652221 222446778899999999999999999999999999998876543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.27  E-value=0.0098  Score=56.41  Aligned_cols=74  Identities=22%  Similarity=0.274  Sum_probs=64.5

Q ss_pred             chhhHHHHHHHH-HHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593        156 TLKVGVPALLYV-IQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS  229 (400)
Q Consensus       156 ~~~~~i~a~l~~-~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~  229 (400)
                      +......+++.. +...+++.+++..+++..+.+..+.|++..++++++++|+++.++++|..+.+.|+.+....
T Consensus       214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            344455555555 58899999999999999999999999999999999999999999999999999999887544

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.24  E-value=0.0046  Score=58.98  Aligned_cols=121  Identities=17%  Similarity=0.117  Sum_probs=86.2

Q ss_pred             hHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCccc
Q psy11593         76 FMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLD  155 (400)
Q Consensus        76 ~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~  155 (400)
                      ..-.++.+++.++.+...+...|+...       ++. .+++-+.+.++++..++....++..+             .+.
T Consensus       136 ~~kgi~~Ll~stigy~~Y~~~~~~~~~-------~~~-~~~lPqaiGm~i~a~i~~~~~~~~~~-------------~k~  194 (269)
T PF06800_consen  136 MKKGILALLISTIGYWIYSVIPKAFHV-------SGW-SAFLPQAIGMLIGAFIFNLFSKKPFF-------------EKK  194 (269)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhcCC-------Chh-HhHHHHHHHHHHHHHHHhhccccccc-------------ccc
Confidence            344556677778888888888888543       222 33444555555555444332211111             122


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHH
Q psy11593        156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLV  217 (400)
Q Consensus       156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~  217 (400)
                      .++=.+.++++.+.|.+++++.+....++.-.+.|+.++..++.+.++|||+=+++++....
T Consensus       195 ~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~  256 (269)
T PF06800_consen  195 SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL  256 (269)
T ss_pred             hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence            33457889999999999999999999999999999999999999999999999999886443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.95  E-value=0.0031  Score=50.50  Aligned_cols=59  Identities=12%  Similarity=0.272  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCChHHHHHH-hhhhHHHHHHHHHHHhcCCccHHHHHHHHH
Q psy11593        160 GVPALLYVIQNNLLYISASNLDAATSQVT-YQLKILTTAIFAIILLKKKISKIQWISLVI  218 (400)
Q Consensus       160 ~i~a~l~~~~~~l~~~al~~l~~s~~~ll-~~~~pl~tal~s~~~L~erls~~qwlal~l  218 (400)
                      .....+|.++..+...+++++|.+++-.+ .....+.+++.+++++||++++.||.++.+
T Consensus        33 ~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   33 ILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             -HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            44445789999999999999998887554 569999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2922|consensus

Probab=96.87  E-value=0.0088  Score=57.79  Aligned_cols=70  Identities=19%  Similarity=0.250  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593        161 VPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS  230 (400)
Q Consensus       161 i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~  230 (400)
                      ..-+.+.++....|.|..+-|++..+-+.++..++.++++..+|+||+++...+|.++.++|-.++....
T Consensus        69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence            3345578899999999999999999999999999999999999999999999999999999998876544

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.82  E-value=0.0035  Score=51.92  Aligned_cols=69  Identities=25%  Similarity=0.384  Sum_probs=62.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCChHHHHHH-hhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593        158 KVGVPALLYVIQNNLLYISASNLDAATSQVT-YQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV  226 (400)
Q Consensus       158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll-~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv  226 (400)
                      +|.+|=+++..+...+|+.+...|.+.+.-+ +++.-++|++.++++.+|..+++.|+|+++.++|+.++
T Consensus        43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            4888999999999999999999999988877 58999999999988877888999999999999999765

Many members are annotated as potential transmembrane proteins.

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.72  E-value=0.021  Score=46.81  Aligned_cols=61  Identities=10%  Similarity=0.036  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593        324 ASGGLIVAVVVKYAD-NILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS  384 (400)
Q Consensus       324 al~g~~~~~~~k~~~-ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~  384 (400)
                      ++.-.+.+..+|..+ .+.=+.-+....+.+.+.|+++|+|++|+.+++|.++++.|+..-+
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            444445566677665 2222344556778999999999999999999999999999987654

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.70  E-value=0.019  Score=46.90  Aligned_cols=62  Identities=15%  Similarity=0.186  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhcc
Q psy11593        324 ASGGLIVAVVVKYADN-ILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSR  385 (400)
Q Consensus       324 al~g~~~~~~~k~~~a-i~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~  385 (400)
                      .+.-.+.+..+|..+- +.=+.-+-...+.+.+.|+++|+|+++...++|.+++++|+..-+.
T Consensus        41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            3444556677787662 2223445567889999999999999999999999999999876554

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.65  E-value=0.024  Score=46.80  Aligned_cols=61  Identities=11%  Similarity=0.083  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593        324 ASGGLIVAVVVKYADN-ILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS  384 (400)
Q Consensus       324 al~g~~~~~~~k~~~a-i~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~  384 (400)
                      ++...+.+..+|..+- +.=+.-+....+.+.+.|+++|+|++|+.+++|.++|+.|+..-+
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4444555667777652 222333456778899999999999999999999999999987643

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.63  E-value=0.00025  Score=65.81  Aligned_cols=270  Identities=13%  Similarity=0.173  Sum_probs=148.5

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchh
Q psy11593         79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLK  158 (400)
Q Consensus        79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~  158 (400)
                      .++..++-++.|++.++...--    ++.++.+.--.-+.   .+++++.+++.... ...             ++.+..
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~----GG~p~qQ~lGtT~G---ALifaiiv~~~~~p-~~T-------------~~~~iv   61 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF----GGKPYQQTLGTTLG---ALIFAIIVFLFVSP-ELT-------------LTIFIV   61 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec----CCChhHhhhhccHH---HHHHHHHHheeecC-ccc-------------hhhHHH
Confidence            3455566788899998654221    23344443333232   22334433332211 111             122222


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCccHHHH----HHHHHHHHhhheeecccccc
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKISKIQW----ISLVILVVGVALVQLSSVVE  233 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erls~~qw----lal~l~~~GVviv~~~~~~~  233 (400)
                      -.+.+++.......+|-|++++..+.+.=+. .++.+-+.+++++.++|--+..|.    .|+++.++|+.+-...+..+
T Consensus        62 ~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~n  141 (288)
T COG4975          62 GFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNN  141 (288)
T ss_pred             HHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccc
Confidence            3566777888888999999998887776554 478889999999999998887775    57888888988877665432


Q ss_pred             cCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCch-HHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccc
Q psy11593        234 KARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVS-IWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNY  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~-~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~  312 (400)
                        +.++...+.-.|+...+.+.+.+-.+.|..+.. +-++-+ ..-|     ..|.+.+.+.+-....+.     .++.+
T Consensus       142 --k~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f-~v~g~saiLPq-----AiGMv~~ali~~~~~~~~-----~~~K~  208 (288)
T COG4975         142 --KEEENPSNLKKGIVILLISTLGYVGYVVLFQLF-DVDGLSAILPQ-----AIGMVIGALILGFFKMEK-----RFNKY  208 (288)
T ss_pred             --ccccChHhhhhheeeeeeeccceeeeEeeeccc-cccchhhhhHH-----HHHHHHHHHHHhhccccc-----chHHH
Confidence              122223345567777777777776655555432 211111 1111     123333322221111111     11112


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHh----HHHHHHHHHHHHHH
Q psy11593        313 TWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQ----FIVGAFFVMCSVFL  382 (400)
Q Consensus       313 ~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~----~liG~~lVi~gv~l  382 (400)
                      .+.-.+.-+.-++|.+.+.+.-...+..+.-..+.+..+++++-+.++++|+=|..    .++|.++++.|..+
T Consensus       209 t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~  282 (288)
T COG4975         209 TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL  282 (288)
T ss_pred             HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence            22222222233555554433333222211112244566899999999999998875    56788888877544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.51  E-value=0.11  Score=51.41  Aligned_cols=63  Identities=11%  Similarity=0.233  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593        324 ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT  386 (400)
Q Consensus       324 al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~  386 (400)
                      ..+..++...++|.+-......+..+++++.++|+++++++.++.+++|++++++|+.+....
T Consensus        90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            346666667788888888888899999999999999999999999999999999998765443

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.05  E-value=0.15  Score=50.56  Aligned_cols=141  Identities=15%  Similarity=0.206  Sum_probs=82.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhCCC-chHHHHHHHHHHhHHHHHH-HHHHhhcCchhhhccccccchHHHHHHH
Q psy11593        243 NRMLGFAATILACLLSGLAGVYFEMILKGSD-VSIWMRNVQLSLLSLPCAA-CTCFISDWDKIFQHGFFYNYTWFIVFLV  320 (400)
Q Consensus       243 ~~~~G~l~~l~aa~~~al~~V~~ekllk~~~-~~~~~~~~~l~~~g~~~~l-~~~~~~~~~~i~~~~~~~~~~~~~~l~i  320 (400)
                      +...|+++++++++|+|.-.+-+|| .|+-+ ...|.  .. .+++.++.. ....+..+.-.   ...+..+...+...
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE~~W~--v~-gi~~wl~~~~~~g~~~~~~f~---~~~~~~~~~~~~~~   76 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWSWETMWS--VG-GIFSWLILPWLIAALLLPDFW---AYYSSFSGSTLLPV   76 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCchhHHHH--HH-HHHHHHHHHHHHHHHHhhhHH---HHHHhcCHHHHHHH
Confidence            4678999999999999998887776 56543 22222  11 112222111 10111111100   11111222222221


Q ss_pred             ----HHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHhcccc---c----HhHHHHHHHHHHHHHHhccCCC
Q psy11593        321 ----LLNASGGLIVAVVVKYADN-ILKGFATSLAIVLACVFQVYLFAFVI---T----FQFIVGAFFVMCSVFLYSRTPS  388 (400)
Q Consensus       321 ----~~~al~g~~~~~~~k~~~a-i~~~~~~~~~~v~a~lls~llfge~~---t----~~~liG~~lVi~gv~ly~~~~~  388 (400)
                          ..-++|++.....+|+.+- ..-.+..-+..++.++++.+++||-.   +    ...++|.+++++|+.+..+...
T Consensus        77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence                2335677777888899873 34445566788999999999998654   2    3478899999999988877443


Q ss_pred             CC
Q psy11593        389 SK  390 (400)
Q Consensus       389 ~~  390 (400)
                      ++
T Consensus       157 ~k  158 (345)
T PRK13499        157 LK  158 (345)
T ss_pred             hc
Confidence            33

>KOG1441|consensus

Probab=96.04  E-value=0.014  Score=57.01  Aligned_cols=145  Identities=14%  Similarity=0.100  Sum_probs=99.4

Q ss_pred             hHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHH-HHHHHhcCCchhhhHHHhhhhcccCcc
Q psy11593         76 FMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCL-GLVFADEGFHVGRFINLVRAHTIQNPL  154 (400)
Q Consensus        76 ~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l-~~l~~~~~~~~~~~~~~l~~~~~~~~~  154 (400)
                      ...+++......+..+..-++.|...++. ++++++.+..--..-+.+.+.+ |+.....+... ..    ...-..+ .
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~-~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~----~~~~~~~-~  233 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSK-GESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VG----FLTAPWF-V  233 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhcc-ccccCchHHHHHhhhHHHHHHhcchHhhhcccce-ee----eeccccc-h
Confidence            45667777777788888888887766421 3455555554443333333333 54444333111 00    0000001 1


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheee
Q psy11593        155 DTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQ  227 (400)
Q Consensus       155 ~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~  227 (400)
                      +...+..-++++...|...|..+.+++|-++++....|=..+.+.+++++++++++.+.+|.++.++|+.+-.
T Consensus       234 ~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  234 TFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            1333455568899999999999999999999999999999999999999999999999999999999998753

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.94  E-value=0.53  Score=40.49  Aligned_cols=131  Identities=15%  Similarity=0.145  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHHHHHH
Q psy11593        248 FAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGG  327 (400)
Q Consensus       248 ~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~~al~g  327 (400)
                      .++.+.+..+.+++...+-++.+..+ +++...+.....|.+...+.....+....   ......++|.|+.-+..++.-
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~---~~~~~~p~w~~lGG~lG~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSL---ASLSSVPWWAYLGGLLGVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccccc---chhccCChHHhccHHHHHHHH
Confidence            45567777777888888887766544 23434444444555555554444333221   112234555555433333333


Q ss_pred             HHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHH-Hh---cccccHhHHHHHHHHHHHHHH
Q psy11593        328 LIVAVVVKYADNILKGFA-TSLAIVLACVFQVY-LF---AFVITFQFIVGAFFVMCSVFL  382 (400)
Q Consensus       328 ~~~~~~~k~~~ai~~~~~-~~~~~v~a~lls~l-lf---ge~~t~~~liG~~lVi~gv~l  382 (400)
                      ....+.+...++...... ..-+.+.+.+++.+ +|   .++++...++|.++++.|+++
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            334455555554333322 23345566677765 33   578999999999999999864

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=95.80  E-value=0.3  Score=46.85  Aligned_cols=79  Identities=13%  Similarity=0.143  Sum_probs=70.2

Q ss_pred             CcccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593        152 NPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS  230 (400)
Q Consensus       152 ~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~  230 (400)
                      +++.+..+...|..-++--.++-.|.+++|.++.-++.+..|...-+++++++||.++.-|+.+-++.-+|+++...++
T Consensus       207 ~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         207 ANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             CchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3455666777788888999999999999999999999999999999999999999999999999999999998876543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.75  E-value=0.15  Score=50.11  Aligned_cols=143  Identities=18%  Similarity=0.254  Sum_probs=79.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhCCC-chHHHHHHHHHHhHHHHHHH--HH-HhhcCchhhhccccccch--HHH
Q psy11593        243 NRMLGFAATILACLLSGLAGVYFEMILKGSD-VSIWMRNVQLSLLSLPCAAC--TC-FISDWDKIFQHGFFYNYT--WFI  316 (400)
Q Consensus       243 ~~~~G~l~~l~aa~~~al~~V~~ekllk~~~-~~~~~~~~~l~~~g~~~~l~--~~-~~~~~~~i~~~~~~~~~~--~~~  316 (400)
                      +...|+++..++++++|...+=.||. |+-+ .+.|...   .+++.++...  .. .+++..++     ....+  .+.
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~---gi~swli~P~~~a~l~ip~~~~i-----~~~~~~~~l~   74 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQ---GIFSWLIVPWLWALLAIPDFFSI-----YSATPASTLF   74 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHH---HHHHHHHHHHHHHHHhCCcHHHH-----HHhCChhHHH
Confidence            56789999999999999887766654 4322 2223221   2233222211  11 12222221     11111  121


Q ss_pred             --HHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhc-------ccccHhHHHHHHHHHHHHHHhccC
Q psy11593        317 --VFLVLLNASGGLIVAVVVKYAD-NILKGFATSLAIVLACVFQVYLFA-------FVITFQFIVGAFFVMCSVFLYSRT  386 (400)
Q Consensus       317 --~l~i~~~al~g~~~~~~~k~~~-ai~~~~~~~~~~v~a~lls~llfg-------e~~t~~~liG~~lVi~gv~ly~~~  386 (400)
                        ++.-+.-++|++.....+||++ +...+++.-+..++.+++--++.|       ++-....++|.+++++|+.+..+.
T Consensus        75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence              2222234678888899999987 344444444455566666444433       233457899999999999887776


Q ss_pred             CCCCCCCC
Q psy11593        387 PSSKPKPP  394 (400)
Q Consensus       387 ~~~~~~~~  394 (400)
                      ...|+++.
T Consensus       155 G~~Ke~~~  162 (344)
T PF06379_consen  155 GSMKEKEL  162 (344)
T ss_pred             HHhhhhhh
Confidence            55554443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.47  E-value=1.1  Score=38.41  Aligned_cols=67  Identities=19%  Similarity=0.209  Sum_probs=51.8

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhh-hHHHHHHHHHH----HhcCCccHHHHHHHHHHHHhhhe
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQL-KILTTAIFAII----LLKKKISKIQWISLVILVVGVAL  225 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~-~pl~tal~s~~----~L~erls~~qwlal~l~~~GVvi  225 (400)
                      +...+++....-.+..+....+.++...++.-+ +.+...++-.+    .-++++++.|.+|+++..+|+.+
T Consensus        67 ~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   67 AYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            444788888888888899999998888877664 44444455554    35799999999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.33  E-value=0.092  Score=41.92  Aligned_cols=53  Identities=15%  Similarity=0.171  Sum_probs=27.5

Q ss_pred             HHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHH
Q psy11593        324 ASGGLIVAVVVKYADNILK-GFATSLAIVLACVFQVYLFAFVITFQFIVGAFFV  376 (400)
Q Consensus       324 al~g~~~~~~~k~~~ai~~-~~~~~~~~v~a~lls~llfge~~t~~~liG~~lV  376 (400)
                      ++.-.+.+..+|+.+-... ...+....+.+.+.|+++|+|++|..+++|..+|
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3344455667777664333 3335577889999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=95.08  E-value=0.19  Score=47.51  Aligned_cols=67  Identities=18%  Similarity=0.229  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCC
Q psy11593        324 ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSK  390 (400)
Q Consensus       324 al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~  390 (400)
                      ++.+.+....+++.|+..-.......+++++++++++++.+++..+|++..+..+|+.+....+...
T Consensus        28 ~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   28 AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            4556666778899999998899999999999999999999999999999999999998877665443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.06  E-value=0.068  Score=44.31  Aligned_cols=63  Identities=30%  Similarity=0.328  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHH
Q psy11593        320 VLLNASGGLIVAVVVKYADNILKG-FATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFL  382 (400)
Q Consensus       320 i~~~al~g~~~~~~~k~~~ai~~~-~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~l  382 (400)
                      .+....|.+.+.+.+...|-.... .+++++-+++.+.++++.+|..+...++|+++|+.|+.+
T Consensus        48 f~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   48 FLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            344455666666777777744444 446889999999999999999999999999999999864

Many members are annotated as potential transmembrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=94.64  E-value=0.041  Score=50.97  Aligned_cols=67  Identities=19%  Similarity=0.212  Sum_probs=59.8

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhe
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVAL  225 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVvi  225 (400)
                      .....++.+++..+..+.+++.++.+..+...+.++++++++.++++++++..+|+|..+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3444566777888899999999999999999999999999999999999999999999999988753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1581|consensus

Probab=94.28  E-value=0.4  Score=46.23  Aligned_cols=138  Identities=9%  Similarity=0.145  Sum_probs=94.0

Q ss_pred             hhHHHHHHHHHHHHHh----hHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcc
Q psy11593         75 AFMLKTTSLITLTLQN----AIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTI  150 (400)
Q Consensus        75 ~~~~~~l~l~ll~~~~----~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~  150 (400)
                      +.+.++++++...+.-    +.+.-+-|       ++...+...++-.++...+.+...+..++.  .........    
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~-------~~k~s~~~mM~~vNLf~~i~~~~~li~qg~--~~~av~F~~----  235 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFK-------KYKVSSLHMMFGVNLFSAILNGTYLILQGH--LLPAVSFIK----  235 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhc-------cCCccHhHHHHHHHHHHHHHHHHhhhcCCC--CchHHHHHH----
Confidence            4566666666554432    22222222       223466677888888877777765444332  221111111    


Q ss_pred             cCcccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhe
Q psy11593        151 QNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVAL  225 (400)
Q Consensus       151 ~~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVvi  225 (400)
                      ++|.-++-+.+.+.+.+++..+.|+-++.-.+-+...+.-++=++..+++.+..+.++++.||+++.+.|.|+..
T Consensus       236 ~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  236 EHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             cChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            123333346777888888888999999999999999999999999999999999999999999998888877643

>KOG1580|consensus

Probab=94.24  E-value=0.064  Score=49.78  Aligned_cols=74  Identities=12%  Similarity=0.290  Sum_probs=63.8

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593        153 PLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV  226 (400)
Q Consensus       153 ~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv  226 (400)
                      |.-++-....|+..+++..+.|.-..+..|-+-+++..+.-+||.+.++++++..++.+||+|..+.|.|...=
T Consensus       238 P~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  238 PYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            43344466677888888888899999999999999999999999999999999999999999999999987543

>KOG2922|consensus

Probab=92.70  E-value=0.072  Score=51.64  Aligned_cols=125  Identities=11%  Similarity=0.181  Sum_probs=89.7

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHH
Q psy11593        242 ENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVL  321 (400)
Q Consensus       242 ~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~  321 (400)
                      .+...|.++.+.++++-+.+.+..+|-+++...                  ..  ...++.  ..+++  ..+++|..++
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~------------------~~--~ra~~g--g~~yl--~~~~Ww~G~l   72 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA------------------SG--LRAGEG--GYGYL--KEPLWWAGML   72 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHHHhh------------------hc--ccccCC--Ccchh--hhHHHHHHHH
Confidence            455678888888888877777777766654311                  00  011111  01222  2466777777


Q ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHH-HhccCCCCC
Q psy11593        322 LNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVF-LYSRTPSSK  390 (400)
Q Consensus       322 ~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~-ly~~~~~~~  390 (400)
                      ..++|-..-...+-+++++..++..+++.+.+++++..++.|.+++.-.+|+++.++|.. +....|+..
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence            778888777778888999999999999999999999999999999999999999998854 444444443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.54  E-value=6.7  Score=34.21  Aligned_cols=136  Identities=12%  Similarity=0.106  Sum_probs=69.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHHHH
Q psy11593        246 LGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNAS  325 (400)
Q Consensus       246 ~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~~al  325 (400)
                      +..+..+.+..+..+++...-++.+..+.+.. -...-...|+...++..+..++..  ....-...++|.|..-   .+
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~-As~isf~vGt~~L~~l~l~~~~~~--~~a~~~~~pwW~~~GG---~l   78 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLL-ASLISFLVGTVLLLILLLIKQGHP--GLAAVASAPWWAWIGG---LL   78 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHhcCCC--chhhccCCchHHHHcc---ch
Confidence            45566777888888888888887665543322 222222334443333322222221  1111123345555432   22


Q ss_pred             HHHHHHH---HHHhhh-hHHHHHHHHHHHHHHHHHHHHHh-c---ccccHhHHHHHHHHHHHHHHhccCC
Q psy11593        326 GGLIVAV---VVKYAD-NILKGFATSLAIVLACVFQVYLF-A---FVITFQFIVGAFFVMCSVFLYSRTP  387 (400)
Q Consensus       326 ~g~~~~~---~~k~~~-ai~~~~~~~~~~v~a~lls~llf-g---e~~t~~~liG~~lVi~gv~ly~~~~  387 (400)
                      |...+..   .....+ +........-+++.+.+++-+=+ |   .+++..-++|++++++|+++..+..
T Consensus        79 Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          79 GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence            3222222   222222 22233333445566666665433 2   6799999999999999977765543

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=92.06  E-value=0.68  Score=43.99  Aligned_cols=128  Identities=16%  Similarity=0.153  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHHHHH
Q psy11593        247 GFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASG  326 (400)
Q Consensus       247 G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~~al~  326 (400)
                      |.+++++|+++.|-..|=.||.- .. +....|- .+.....+.+.+..++.+..         .+.++..+.-..-+.|
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-~g-Dg~~fQw-~~~~~i~~~g~~v~~~~~~p---------~f~p~amlgG~lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-TG-DGFFFQW-VMCSGIFLVGLVVNLILGFP---------PFYPWAMLGGALWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-CC-CcHHHHH-HHHHHHHHHHHHHHHhcCCC---------cceeHHHhhhhhhhcC
Confidence            45666777777776655555432 22 2333332 22222222333332222111         1122222222223445


Q ss_pred             HHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHH-Hhccccc-----HhHHHHHHHHHHHHHHhccC
Q psy11593        327 GLIVAVVVKYAD-NILKGFATSLAIVLACVFQVY-LFAFVIT-----FQFIVGAFFVMCSVFLYSRT  386 (400)
Q Consensus       327 g~~~~~~~k~~~-ai~~~~~~~~~~v~a~lls~l-lfge~~t-----~~~liG~~lVi~gv~ly~~~  386 (400)
                      +++...++|.++ ++-..+-.+...+..+..|-+ +||++++     +.-.+|++++++|..+|...
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi  135 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI  135 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence            555555666655 333334455566666666643 6665443     34789999999998877653

The region concerned is approximately 280 residues long.

>KOG1444|consensus

Probab=91.99  E-value=1  Score=43.79  Aligned_cols=145  Identities=11%  Similarity=0.027  Sum_probs=100.3

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccch
Q psy11593         78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTL  157 (400)
Q Consensus        78 ~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~  157 (400)
                      .+|..+..-.+..++..+.+|..-..   ........++-..++.+.+.....+..+.  ......+.  .-...+.-+.
T Consensus       157 ~gY~w~~~n~~~~a~~~v~~kk~vd~---~~l~~~~lv~yNnl~~L~~l~~~~~~~ge--~~~l~~~~--~~~~~~~~~~  229 (314)
T KOG1444|consen  157 RGYSWALANCLTTAAFVVYVKKSVDS---ANLNKFGLVFYNNLLSLPPLLILSFITGE--LDALSLNF--DNWSDSSVLV  229 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcc---ccccceeEEeehhHHHHHHHHHHHHHhcc--hHHHHhhc--ccccchhHHH
Confidence            35666666666667777777776532   22344557777777777766666555442  22111110  0001112233


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593        158 KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS  229 (400)
Q Consensus       158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~  229 (400)
                      .+.+.+++..+-+++.++..+..++.+.+++.....+.+.+...++.+++.++....|+.++++|-++-+..
T Consensus       230 ~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~  301 (314)
T KOG1444|consen  230 VMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYA  301 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhh
Confidence            467777888899999999999999999999998888888888888888999999999999999998876544

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=91.55  E-value=0.62  Score=43.11  Aligned_cols=69  Identities=12%  Similarity=0.082  Sum_probs=61.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593        158 KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV  226 (400)
Q Consensus       158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv  226 (400)
                      .+++.|++-++-.++.-|-++-++.++++++.++.-+..++-+.+++++..+.....+++++++..++-
T Consensus       226 am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iY  294 (309)
T COG5070         226 AMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY  294 (309)
T ss_pred             HHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence            467888888888888888999999999999999999999999999999999999999999888776554

>KOG4510|consensus

Probab=91.49  E-value=0.11  Score=49.09  Aligned_cols=59  Identities=17%  Similarity=0.119  Sum_probs=45.7

Q ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593        330 VAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS  388 (400)
Q Consensus       330 ~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~  388 (400)
                      +.|.+.|.+-.-....+..+|+++++++|.+++|+.|.+-.+|..+.+.|+.+..|++-
T Consensus       114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen  114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence            34455554322223355679999999999999999999999999999999988887753

>KOG2765|consensus

Probab=91.01  E-value=4.6  Score=40.30  Aligned_cols=148  Identities=14%  Similarity=0.057  Sum_probs=97.6

Q ss_pred             hhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCc-
Q psy11593         75 AFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNP-  153 (400)
Q Consensus        75 ~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~-  153 (400)
                      +..++-++..+.++.|+....+.|.=..++ |.+.+....--+..++-+++-.+.++.-.....++         +.-| 
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~e-g~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~---------F~lP~  313 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDE-GERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER---------FELPS  313 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccc-cccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc---------ccCCC
Confidence            367888888888999999988877744332 34555433332333334433332222111000010         0111 


Q ss_pred             -ccchhh-HHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccc
Q psy11593        154 -LDTLKV-GVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSV  231 (400)
Q Consensus       154 -~~~~~~-~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~  231 (400)
                       .+.... ....+.-++..+++-.|.-..++-+.++-...++...++.-.++-++++|+.+++|-...++|-+++..++.
T Consensus       314 ~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  314 STQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             CceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence             111122 333344678999999999999999999999988888888888888999999999999999999999987654


Q ss_pred             c
Q psy11593        232 V  232 (400)
Q Consensus       232 ~  232 (400)
                      .
T Consensus       394 ~  394 (416)
T KOG2765|consen  394 N  394 (416)
T ss_pred             c
Confidence            3

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=90.33  E-value=20  Score=35.48  Aligned_cols=179  Identities=10%  Similarity=0.027  Sum_probs=102.5

Q ss_pred             hhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcc
Q psy11593         75 AFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPL  154 (400)
Q Consensus        75 ~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~  154 (400)
                      +..++.+.-.+-.+..++-.+-.|..+..      +-.+.=++..++.+++.-.+.....-.+..+.       +...|.
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~W------sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i-------~~~~~~   70 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKGW------SWESYWLVQGIFSWLIVPWLWALLAIPDFFSI-------YSATPA   70 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCCc------cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH-------HHhCCh
Confidence            45566666666666666666666666642      21222244556666554443322221122221       112232


Q ss_pred             c-chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhc-------CCccHHHHHHHHHHHHhhhe
Q psy11593        155 D-TLKVGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLK-------KKISKIQWISLVILVVGVAL  225 (400)
Q Consensus       155 ~-~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~-------erls~~qwlal~l~~~GVvi  225 (400)
                      + .+....-+++.-+....+=.+++|+..+.-+-+. .+...+-+++-.++.+       ++-...-++++++.++|+.+
T Consensus        71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai  150 (344)
T PF06379_consen   71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI  150 (344)
T ss_pred             hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence            3 3334556777888888888899998766544333 3444444444444433       34456788999999999999


Q ss_pred             eeccccccc-C-CCCcccccchhHHHHHHHHHHHHHHHHHHHH
Q psy11593        226 VQLSSVVEK-A-RPADFVENRMLGFAATILACLLSGLAGVYFE  266 (400)
Q Consensus       226 v~~~~~~~~-~-~~~~~~~~~~~G~l~~l~aa~~~al~~V~~e  266 (400)
                      +...+...+ + +.+..+.+.-.|++.++++.++||+-+.-.+
T Consensus       151 ~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~  193 (344)
T PF06379_consen  151 CGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD  193 (344)
T ss_pred             HhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            976553211 0 0111233556899999999999988766443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=88.50  E-value=0.21  Score=46.79  Aligned_cols=63  Identities=27%  Similarity=0.388  Sum_probs=56.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHH
Q psy11593        156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVI  218 (400)
Q Consensus       156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l  218 (400)
                      .++-.+|++.....|...++|.+....++.--+.|+..+...+-..++||||=++++|..+..
T Consensus       209 t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~i  271 (288)
T COG4975         209 TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVII  271 (288)
T ss_pred             HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhh
Confidence            344588999999999999999999999999999999999999999999999999999875543

>KOG1583|consensus

Probab=87.19  E-value=2.7  Score=40.22  Aligned_cols=163  Identities=15%  Similarity=0.243  Sum_probs=88.6

Q ss_pred             ccccccCCCcccccCchhh------HhhhhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHH
Q psy11593         53 YNCKLATNGEVREVGPEMA------QSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVC  126 (400)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~  126 (400)
                      .=|-|.+.+|.+..+...+      .-.....++..+++..+..+-+++.-....++- |+  .+.+.+|..-++.+   
T Consensus       133 iIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~ky-GK--h~~EalFytH~LsL---  206 (330)
T KOG1583|consen  133 IICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKY-GK--HWKEALFYTHFLSL---  206 (330)
T ss_pred             eeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC--ChHHHHHHHHHhcc---
Confidence            4466777776665222222      112345555555555555555555443332221 22  56678888877754   


Q ss_pred             HHHHHHhcCCchhhhHHHhhhhcccCcc---cchhhHHHH-HHHHHHHHHH-HHHhhc-------CChHHHHHHhhhhHH
Q psy11593        127 LGLVFADEGFHVGRFINLVRAHTIQNPL---DTLKVGVPA-LLYVIQNNLL-YISASN-------LDAATSQVTYQLKIL  194 (400)
Q Consensus       127 l~~l~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~i~a-~l~~~~~~l~-~~al~~-------l~~s~~~ll~~~~pl  194 (400)
                       +....-++ +....    ++..+.+++   ...-..+|. ..|.+.|.+. |.-.+.       .++-+.++...++=+
T Consensus       207 -P~Flf~~~-div~~----~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKF  280 (330)
T KOG1583|consen  207 -PLFLFMGD-DIVSH----WRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKF  280 (330)
T ss_pred             -chHHHhcc-hHHHH----HHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHH
Confidence             33322222 22221    111111110   001122343 3465555443 333332       334455566677788


Q ss_pred             HHHHHHHHHhcCCccHHHHHHHHHHHHhhheee
Q psy11593        195 TTAIFAIILLKKKISKIQWISLVILVVGVALVQ  227 (400)
Q Consensus       195 ~tal~s~~~L~erls~~qwlal~l~~~GVviv~  227 (400)
                      +..+++.+.++..+++++|+|..+.|.|.++..
T Consensus       281 vSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  281 VSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             HHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            889999999999999999999999999998764

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=87.07  E-value=13  Score=35.43  Aligned_cols=168  Identities=13%  Similarity=0.012  Sum_probs=100.7

Q ss_pred             HHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhh
Q psy11593         80 TTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKV  159 (400)
Q Consensus        80 ~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  159 (400)
                      ++..++.++.++++.+=+|...+. |+   ...+.+.  ..-.++.++.+......  ++               =....
T Consensus         2 ~~a~~va~~~fGs~~vPvK~~~~g-Dg---~~fQw~~--~~~i~~~g~~v~~~~~~--p~---------------f~p~a   58 (254)
T PF07857_consen    2 YIACIVAVLFFGSNFVPVKKFDTG-DG---FFFQWVM--CSGIFLVGLVVNLILGF--PP---------------FYPWA   58 (254)
T ss_pred             chhHHHHHHHhcccceeeEeccCC-Cc---HHHHHHH--HHHHHHHHHHHHHhcCC--Cc---------------ceeHH
Confidence            456777788889998777765542 22   1111111  12223334433333221  11               01124


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHH-H-HhcC-----CccHHHHHHHHHHHHhhheeeccccc
Q psy11593        160 GVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAI-I-LLKK-----KISKIQWISLVILVVGVALVQLSSVV  232 (400)
Q Consensus       160 ~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~-~-~L~e-----rls~~qwlal~l~~~GVviv~~~~~~  232 (400)
                      .+.|++.+.+|.+..-.++.+..+...++..+.-+.+.-..- + +++.     +-.+..++|+++.++|..+...-...
T Consensus        59 mlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   59 MLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             HhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            566789999999999999999999999999986666654432 2 3332     24567888999999998877531110


Q ss_pred             c-------c------C------CC----Cc--------ccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy11593        233 E-------K------A------RP----AD--------FVENRMLGFAATILACLLSGLAGVYFEMILK  270 (400)
Q Consensus       233 ~-------~------~------~~----~~--------~~~~~~~G~l~~l~aa~~~al~~V~~ekllk  270 (400)
                      .       +      +      ++    ++        ...+...|.++++++.+++|...+=.+.+..
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~  207 (254)
T PF07857_consen  139 EKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQD  207 (254)
T ss_pred             CCCccccccccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHh
Confidence            0       0      0      00    00        1114678888888888888887765654433

The region concerned is approximately 280 residues long.

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=86.51  E-value=1.3  Score=36.08  Aligned_cols=41  Identities=12%  Similarity=0.376  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHH
Q psy11593        342 KGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFL  382 (400)
Q Consensus       342 ~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~l  382 (400)
                      |.+-...+..+-+.+++++++|++++.++.|.+++++|++.
T Consensus        65 Ki~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f  105 (108)
T PF04342_consen   65 KIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF  105 (108)
T ss_pred             HHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence            33344556666677888999999999999999999999875

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=86.31  E-value=22  Score=31.04  Aligned_cols=127  Identities=17%  Similarity=0.139  Sum_probs=71.8

Q ss_pred             HHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHH
Q psy11593         84 ITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPA  163 (400)
Q Consensus        84 ~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a  163 (400)
                      .++..|.+.|.-+.|+.++     ++..+.+-|....+.+++...+  .++..... .          .++..|...++|
T Consensus        15 ~~l~~Q~~iN~qL~~~~~s-----pl~As~isf~vGt~~L~~l~l~--~~~~~~~a-~----------~~~~pwW~~~GG   76 (150)
T COG3238          15 ALLPLQAAINGRLARYLGS-----PLLASLISFLVGTVLLLILLLI--KQGHPGLA-A----------VASAPWWAWIGG   76 (150)
T ss_pred             hhhhhHHHHHHHHHHHcCC-----hHHHHHHHHHHHHHHHHHHHHH--hcCCCchh-h----------ccCCchHHHHcc
Confidence            3466777777666666553     3455555566655544433332  33321111 0          012223345556


Q ss_pred             HHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHh----cCCccHHHHHHHHHHHHhhheeec
Q psy11593        164 LLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILL----KKKISKIQWISLVILVVGVALVQL  228 (400)
Q Consensus       164 ~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L----~erls~~qwlal~l~~~GVviv~~  228 (400)
                      ++.+..-.........+.+++...+. ..+.+.-.++-.+=+    ++++++.+++++++.++|+.+++.
T Consensus        77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            66555555555666777666655544 445555444444322    488999999999999999776654

>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=81.52  E-value=26  Score=28.20  Aligned_cols=41  Identities=7%  Similarity=0.367  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHh
Q psy11593        343 GFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLY  383 (400)
Q Consensus       343 ~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly  383 (400)
                      ..-...+..+-..+|++.++|++.+.++.|..+++.|+++.
T Consensus        73 ~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi  113 (116)
T COG3169          73 TMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI  113 (116)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence            33344455566788999999999999999999999998764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	400
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.4
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.27
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.26
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.0

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.40  E-value=1.1e-06  Score=71.62  Aligned_cols=72  Identities=13%  Similarity=0.182  Sum_probs=65.1

Q ss_pred             hHHHHHHHHHHHHHHHHHhhcCChHHHHHH-hhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593        159 VGVPALLYVIQNNLLYISASNLDAATSQVT-YQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS  230 (400)
Q Consensus       159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll-~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~  230 (400)
                      .....++|.+...+...+++++|.+.+..+ ..+.|+++++++++++||++++.||+|+.+.++|++.+...+
T Consensus        33 ~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            445556788999999999999999999888 799999999999999999999999999999999999886543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.27  E-value=6.9e-07  Score=75.63  Aligned_cols=71  Identities=13%  Similarity=0.190  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCChHHHHHH-hhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593        160 GVPALLYVIQNNLLYISASNLDAATSQVT-YQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS  230 (400)
Q Consensus       160 ~i~a~l~~~~~~l~~~al~~l~~s~~~ll-~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~  230 (400)
                      .+..+++.++..++..+++++|++.+..+ ..+.|+++++++++++||++++.||+|+++.++||+++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45566788999999999999999988888 899999999999999999999999999999999999986543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.26  E-value=1.2e-06  Score=74.15  Aligned_cols=70  Identities=13%  Similarity=0.200  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCC
Q psy11593        318 FLVLLNASGGLIVAVVVKYADNILKGFA-TSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP  387 (400)
Q Consensus       318 l~i~~~al~g~~~~~~~k~~~ai~~~~~-~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~  387 (400)
                      +.++..+++..+..+.+|+.+....... +.+.+++++++|+++|||++|+.+++|+++|++|+++.++..
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344445566667788899888777666 899999999999999999999999999999999998877543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.00  E-value=4.2e-05  Score=62.16  Aligned_cols=67  Identities=13%  Similarity=0.226  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCC
Q psy11593        321 LLNASGGLIVAVVVKYADNILKGFA-TSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP  387 (400)
Q Consensus       321 ~~~al~g~~~~~~~k~~~ai~~~~~-~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~  387 (400)
                      +..+++..+....+|+.|....... ..+.++++.++|+++|+|++|..+++|.++|+.|+++.+...
T Consensus        38 ~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344455566778899887777665 789999999999999999999999999999999998876543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00