Psyllid ID: psy11622
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 346 | ||||||
| 156545463 | 305 | PREDICTED: RNA (guanine-9-)-methyltransf | 0.864 | 0.980 | 0.488 | 1e-73 | |
| 383847348 | 332 | PREDICTED: RNA (guanine-9-)-methyltransf | 0.791 | 0.825 | 0.494 | 1e-68 | |
| 340721209 | 322 | PREDICTED: RNA (guanine-9-)-methyltransf | 0.693 | 0.745 | 0.531 | 2e-67 | |
| 350399341 | 322 | PREDICTED: RNA (guanine-9-)-methyltransf | 0.693 | 0.745 | 0.531 | 3e-67 | |
| 307214736 | 312 | RNA (guanine-9-)-methyltransferase domai | 0.687 | 0.762 | 0.506 | 2e-65 | |
| 332020247 | 333 | RNA (guanine-9-)-methyltransferase domai | 0.699 | 0.726 | 0.493 | 6e-65 | |
| 307184386 | 338 | RNA (guanine-9-)-methyltransferase domai | 0.713 | 0.730 | 0.493 | 7e-64 | |
| 322785597 | 317 | hypothetical protein SINV_04857 [Solenop | 0.656 | 0.716 | 0.495 | 3e-61 | |
| 328784493 | 295 | PREDICTED: RNA (guanine-9-)-methyltransf | 0.624 | 0.732 | 0.520 | 2e-60 | |
| 357614250 | 300 | hypothetical protein KGM_11820 [Danaus p | 0.710 | 0.82 | 0.502 | 4e-60 |
| >gi|156545463|ref|XP_001606849.1| PREDICTED: RNA (guanine-9-)-methyltransferase domain-containing protein 2-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/309 (48%), Positives = 209/309 (67%), Gaps = 10/309 (3%)
Query: 8 SNNLEANSIEAIQDDPEPKIEKNVPENEPCDTNTAEPPLSKRAMKRKLKHEKWLKWKPIK 67
+NN++++SI + E IE + + +T E LSKR +K+ K EKWLK KP K
Sbjct: 3 NNNVKSDSITKV----EESIESCNLDTDQNRQSTTETTLSKRQLKKIRKKEKWLKLKPEK 58
Query: 68 RAKEREKLKQKKQYAREHNIPLGPSRKALKLVKMETSPNKLRVCIDFSFDHLMTQKDICK 127
R +ER K K+K+ +AR +N+ LGPSRK LK M SP KL V ID SFD LM KDI K
Sbjct: 59 RLRERAKAKEKRAFARANNLDLGPSRKYLKSCTMADSPCKLNVTIDLSFDELMISKDIAK 118
Query: 128 CVKQFNWCYSLNRRAQHPLQFYVSSFKDKCKQEIARYNGYEHWDVHIHEQAYLDLFKKED 187
+KQ CY+LNRRA PLQF ++SF+ K E+ ++NGYEHWDV + ++YLD+F K+
Sbjct: 119 LIKQILRCYTLNRRAVAPLQFSLTSFEGKSLDEMGKHNGYEHWDVKFYSKSYLDIFPKDK 178
Query: 188 LVYLTSDSDNIIEELDQSKVYIIGGLVDHNQHKLLTLNKAREENIAHGKLPIDTYLNMKT 247
+VYLTS+S+NIIEEL+ VY+IGGLVDHN K L A E+ I HG+LP+D +L MK
Sbjct: 179 IVYLTSESENIIEELNNDHVYVIGGLVDHNCQKGLCHRLAVEKGINHGRLPLDKFLQMKA 238
Query: 248 RQVLAVNHVFQILLAISSDKKSWKDALLETLPERKNA--AAKNTG--SEDAESCGEEEFE 303
R+VL V+HVF+I+L + ++ K+W++A L+ LPERKNA K+T S+D++S E + E
Sbjct: 239 RKVLTVDHVFEIILRV-TEGKTWQEAFLQVLPERKNAQPVLKDTASNSDDSQSKNETD-E 296
Query: 304 IKTGGEKSG 312
++ GE +
Sbjct: 297 VEAEGETTS 305
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383847348|ref|XP_003699316.1| PREDICTED: RNA (guanine-9-)-methyltransferase domain-containing protein 2-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|340721209|ref|XP_003399017.1| PREDICTED: RNA (guanine-9-)-methyltransferase domain-containing protein 2-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|350399341|ref|XP_003485494.1| PREDICTED: RNA (guanine-9-)-methyltransferase domain-containing protein 2-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|307214736|gb|EFN89656.1| RNA (guanine-9-)-methyltransferase domain-containing protein 2 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|332020247|gb|EGI60683.1| RNA (guanine-9-)-methyltransferase domain-containing protein 2 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
| >gi|307184386|gb|EFN70800.1| RNA (guanine-9-)-methyltransferase domain-containing protein 2 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
| >gi|322785597|gb|EFZ12252.1| hypothetical protein SINV_04857 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|328784493|ref|XP_625003.2| PREDICTED: RNA (guanine-9-)-methyltransferase domain-containing protein 2-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|357614250|gb|EHJ68987.1| hypothetical protein KGM_11820 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 346 | ||||||
| UNIPROTKB|Q8TBZ6 | 339 | TRMT10A "tRNA methyltransferas | 0.898 | 0.917 | 0.394 | 2.9e-55 | |
| UNIPROTKB|F1S0Z2 | 373 | RG9MTD2 "Uncharacterized prote | 0.898 | 0.833 | 0.379 | 3.4e-54 | |
| UNIPROTKB|Q3MHI8 | 338 | TRMT10A "tRNA methyltransferas | 0.921 | 0.943 | 0.375 | 3e-53 | |
| UNIPROTKB|E2RGS3 | 346 | TRMT10A "Uncharacterized prote | 0.907 | 0.907 | 0.373 | 4.9e-53 | |
| UNIPROTKB|F1N8S8 | 304 | RG9MTD2 "Uncharacterized prote | 0.777 | 0.884 | 0.409 | 8e-53 | |
| MGI|MGI:1920421 | 328 | Trmt10a "tRNA methyltransferas | 0.921 | 0.972 | 0.366 | 1.5e-51 | |
| RGD|1594565 | 335 | Trmt10a "tRNA methyltransferas | 0.930 | 0.961 | 0.365 | 1.5e-51 | |
| WB|WBGene00009131 | 297 | F25H8.1 [Caenorhabditis elegan | 0.791 | 0.922 | 0.415 | 4e-51 | |
| FB|FBgn0031189 | 319 | CG14618 [Drosophila melanogast | 0.768 | 0.833 | 0.355 | 2.6e-47 | |
| POMBASE|SPAC6B12.09 | 304 | trm10 "tRNA m(1)G methyltransf | 0.768 | 0.875 | 0.358 | 2.6e-40 |
| UNIPROTKB|Q8TBZ6 TRMT10A "tRNA methyltransferase 10 homolog A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 129/327 (39%), Positives = 193/327 (59%)
Query: 11 LEANSIEAIQDDPEPKIEKNVPE-NEPCDTNTAEPPLSKRAMKRKLKHEKWLKWKPIKRA 69
+E ++++ Q E + E P E C+ P+SKR MK+ +K ++W + + +++
Sbjct: 10 IETSNVDKKQGINEDQEESQKPRLGEGCE------PISKRQMKKLIKQKQWEEQRELRKQ 63
Query: 70 KEREKLKQKKQYAREHNIPLGPSRKALKLVKMETSPNKLRVCIDFSFDHLMTQKDICKCV 129
K +EK K+KK R+ + K V+ + + LR+ ID SFDHLM KDI K
Sbjct: 64 KRKEKRKRKK-LERQCQMEPNSDGHDRKRVRRDVVHSTLRLIIDCSFDHLMVLKDIKKLH 122
Query: 130 KQFNWCYSLNRRAQHPLQFYVSSFKDKCKQEIARYN-GYEHW-DVHIHEQAYLDLFKKED 187
KQ CY+ NRRA HP+QFY++S + K+ + + G+ +W D+HI + Y +L KKED
Sbjct: 123 KQIQRCYAENRRALHPVQFYLTSHGGQLKKNMDENDKGWVNWKDIHIKPEHYSELIKKED 182
Query: 188 LVYLTSDSDNIIEELDQSKVYIIGGLVDHNQHKLLTLNKAREENIAHGKLPIDTYLNMKT 247
L+YLTSDS NI++ELD+SK Y+IGGLVDHN HK LT +A + I H +LP+ ++ M +
Sbjct: 183 LIYLTSDSPNILKELDESKAYVIGGLVDHNHHKGLTYKQASDYGINHAQLPLGNFVKMNS 242
Query: 248 RQVLAVNHVFQILLAISSDKKSWKDALLETLPERKNAAAKNTGSEDAESCGEEEFEIKTG 307
R+VLAVNHVF+I+L + + W++A LP+RK A + E A S + ++ G
Sbjct: 243 RKVLAVNHVFEIILEYL-ETRDWQEAFFTILPQRKGAVPTDKACESA-SHDNQSVRMEEG 300
Query: 308 GEKSGN--ERCEAESCDRSEHEKKVQD 332
G S + E D S HE+K QD
Sbjct: 301 GSDSDSSEEEYSRNELD-SPHEEK-QD 325
|
|
| UNIPROTKB|F1S0Z2 RG9MTD2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q3MHI8 TRMT10A "tRNA methyltransferase 10 homolog A" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RGS3 TRMT10A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1N8S8 RG9MTD2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1920421 Trmt10a "tRNA methyltransferase 10A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1594565 Trmt10a "tRNA methyltransferase 10 homolog A (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00009131 F25H8.1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0031189 CG14618 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPAC6B12.09 trm10 "tRNA m(1)G methyltransferase Trm10 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 346 | |||
| pfam01746 | 185 | pfam01746, tRNA_m1G_MT, tRNA (Guanine-1)-methyltra | 1e-34 |
| >gnl|CDD|216676 pfam01746, tRNA_m1G_MT, tRNA (Guanine-1)-methyltransferase | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 1e-34
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 117 DHLMTQKDICKCVKQFNWCYSLNRRAQHPLQFYVSSFKDKCKQE-----IARYNGYEHW- 170
D LM +K++ Q Y+ NRRA Y F K E + +G+E
Sbjct: 1 DDLMIEKELVSLELQILRDYTANRRATVDDHLYGGGFGMVLKPEPDLEALKSVSGWEVIL 60
Query: 171 ----DVHIHEQAYLDLFKKEDLVYLTSDSDNIIEELDQSK-VYIIGGLVDHNQHK----L 221
+ ++ +LFKKE LVYLT D + ++E LD K YIIGG+VD K L
Sbjct: 61 LTPTGIPFSQELASELFKKEHLVYLTGDYEGVLERLDDDKAEYIIGGIVDKGGEKGALTL 120
Query: 222 LTLNKAREENIA-HGKLPIDTYLNMKT--RQVLAVNHVFQILLAISSDK-KSWKDALLET 277
+ A + LP+D++L + L +N V +ILL+ + K ++W++ALL T
Sbjct: 121 IDAVVALLPGVLNTASLPLDSFLLGVPNYTRPLTLNQVPEILLSGNHAKIRNWEEALLRT 180
Query: 278 LPERK 282
+P+RK
Sbjct: 181 IPKRK 185
|
This is a family of tRNA (Guanine-1)-methyltransferases EC:2.1.1.31. In E.coli K12 this enzyme catalyzes the conversion of a guanosine residue to N1-methylguanine in position 37, next to the anticodon, in tRNA. Length = 185 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 346 | |||
| KOG2967|consensus | 314 | 100.0 | ||
| PF01746 | 186 | tRNA_m1G_MT: tRNA (Guanine-1)-methyltransferase; I | 100.0 | |
| COG2419 | 336 | Uncharacterized conserved protein [Function unknow | 99.92 | |
| COG2428 | 196 | Uncharacterized conserved protein [Function unknow | 93.42 | |
| PF04252 | 196 | RNA_Me_trans: Predicted SAM-dependent RNA methyltr | 90.41 | |
| smart00250 | 38 | PLEC Plectin repeat. | 82.23 |
| >KOG2967|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-67 Score=509.07 Aligned_cols=266 Identities=41% Similarity=0.679 Sum_probs=219.5
Q ss_pred cccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH-HHHHcCCCCCc-chH---HH-HHHh
Q psy11622 27 IEKNVPENEPCDTNTAEPPLSKRAMKRKLKHEKWLKWKPIKRAKEREKLKQKKQ-YAREHNIPLGP-SRK---AL-KLVK 100 (346)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~lSK~q~KKl~k~~kwe~~K~~rr~~~kekkK~kr~-~~~~~~~~~~~-~rk---~~-k~~~ 100 (346)
.++.++.+.+..... +.++||+|+|++++++.|++.++.+++++|++...++. +.+...+.++. .|. +. .+..
T Consensus 13 ~e~~v~~~~~~~~p~-~e~~sk~q~k~~~k~~~wee~~~~~~~~rr~~er~~k~~~k~~~~i~~g~~~r~~~~~~~~r~~ 91 (314)
T KOG2967|consen 13 SEESVKHQEPGQQPV-AEPMSKKQLKRQKKQAEWEELKKKKKERRREKERLRKKQEKRNELIELGLEVRLRRIRMEKRIL 91 (314)
T ss_pred cHHHhcccCCCCCcc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcccCchhhHHHHHHHHHhH
Confidence 555566666554443 45899999999999999999998885433332222222 12223333332 222 22 2333
Q ss_pred hhcCCCCCeEEEEcCCCcccCHHHHhHHHHHHHHHHHHhhhcCCCCcEEEEcCChhHHHHHHH---hcCCCcc-ceEEec
Q psy11622 101 METSPNKLRVCIDFSFDHLMTQKDICKCVKQFNWCYSLNRRAQHPLQFYVSSFKDKCKQEIAR---YNGYEHW-DVHIHE 176 (346)
Q Consensus 101 ~~~~~~~~~IvIDcsFddlM~~KEi~SL~~QL~~~Ys~NRr~~~P~~L~lts~~g~l~~~l~k---~~g~~nW-~v~~~~ 176 (346)
..+.++||+|||||+|+++|+.||+.+|++||++||++||++..||+|+||||.+.+...++. +.||.+| .+.+.+
T Consensus 92 ~~~~~s~~rivlD~sfd~lM~~kei~~l~~Qi~~~y~~Nr~a~~Pf~l~~~n~~~~~~~~~~l~~~~~~~~n~~~~~~~~ 171 (314)
T KOG2967|consen 92 AKAMDSGPRIVLDCSFDELMNEKEIVNLVNQIQRCYSENRRAKHPFHLHFTNFQGDIFKRQDLVKKNPGYENWKRIILYP 171 (314)
T ss_pred HhhhccCCeEEEeccHHHHHhHHHHHHHHHHHHHHhhhcccCCCCeEEEEecCCcchHHHHHHHhcCCCcccceeeeccc
Confidence 356799999999999999999999999999999999999999999999999999877665443 4478899 566677
Q ss_pred chhhhc-cCCCCeEEeCCCCccccccccCCceEEEEeEecCCCChhhhHHHHHHcCCcccccccccccccCCCcccchHH
Q psy11622 177 QAYLDL-FKKEDLVYLTSDSDNIIEELDQSKVYIIGGLVDHNQHKLLTLNKAREENIAHGKLPIDTYLNMKTRQVLAVNH 255 (346)
Q Consensus 177 ~~~~el-f~k~~iVYLSpDS~~~L~eld~~kvYIIGGIVDrnr~Kglt~~kA~e~GI~taRLPI~eyi~l~~rkVLtiN~ 255 (346)
..+..+ |.+++||||||||+++|++++|++|||||||||+|++||+|+.+|.++||+||||||++||+|.+++|||+||
T Consensus 172 ~~~s~~~~kkenlVYLT~ds~~vL~dldp~~vYiIGglVD~n~~k~l~~~kA~~~gi~tarLPi~eyi~~~s~~vLt~nq 251 (314)
T KOG2967|consen 172 ECTSLLPFKKENLVYLTADSENVLEDLDPDKVYIIGGLVDKNRQKGLTLSKAQEYGIRTARLPLDEYIKMESRKVLTLNQ 251 (314)
T ss_pred cccccccCCccceEEECCCCccchhccCCCcEEEEEEEecCCCCcchhHHHHHHcCCCcccCchHHhhhcCCCceeeHHH
Confidence 777777 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhCCCCHHHHHHhhCCCCcccccccCCCCCc
Q psy11622 256 VFQILLAISSDKKSWKDALLETLPERKNAAAKNTGSEDA 294 (346)
Q Consensus 256 V~EILl~~~e~~~DW~eA~~~vIP~RK~~~~~~~~~~~~ 294 (346)
||+||+.|++ ++||.+||+++||+||+..+..+++.+.
T Consensus 252 v~~Il~~~~~-~~dW~~Al~~~ip~RKg~~~~~~~~~~~ 289 (314)
T KOG2967|consen 252 VFEILLKYLE-TGDWKEALLSNIPKRKGAGLKSQESSEK 289 (314)
T ss_pred HHHHHHHHHh-cCCHHHHHHHhCccccccCccchhhhhh
Confidence 9999999999 9999999999999999999988744433
|
|
| >PF01746 tRNA_m1G_MT: tRNA (Guanine-1)-methyltransferase; InterPro: IPR016009 In transfer RNA many different modified nucleosides are found, especially in the anticodon region | Back alignment and domain information |
|---|
| >COG2419 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG2428 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04252 RNA_Me_trans: Predicted SAM-dependent RNA methyltransferase; InterPro: IPR007364 This family of proteins are predicted to be alpha/beta-knot SAM-dependent RNA methyltransferases [] | Back alignment and domain information |
|---|
| >smart00250 PLEC Plectin repeat | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 346 | ||||
| 4fmw_A | 197 | Crystal Structure Of Methyltransferase Domain Of Hu | 1e-43 |
| >pdb|4FMW|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Rna (Guanine-9- ) Methyltransferase Domain Containing Protein 2 Length = 197 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 346 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 2e-04
Identities = 57/461 (12%), Positives = 125/461 (27%), Gaps = 141/461 (30%)
Query: 5 QDLSNN--LEANSIEAIQDDPEPK----IEKNVPENEPCDTNTAEPP------------- 45
L +A D+ + K + K++ E D
Sbjct: 14 HQYQYKDILSVF-EDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL 72
Query: 46 -----LSKRAMKRKLKHE-KWLKWKPIKR------------AKEREKLKQKKQYAREHNI 87
+ ++ ++ L+ K+L PIK ++R++L Q ++N+
Sbjct: 73 SKQEEMVQKFVEEVLRINYKFL-MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131
Query: 88 PLGPSRKALKLVKMETSPNK----------------LRVCIDFSF--------------- 116
L+ +E P K L VC+ +
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191
Query: 117 -----DHLMTQKDICKCVKQFNWCYSLNRRAQHPLQFYVSSFKDKCKQEIARYNGYEH-- 169
L + + + NW + + L+ S + + + + + YE+
Sbjct: 192 CNSPETVLEMLQKLLYQIDP-NWTSRSDHSSNIKLRI--HSIQAE-LRRLLKSKPYENCL 247
Query: 170 ------WDVHIHEQAYLDLFKKEDL---VYLTSDSDNIIEELDQSKVYIIGGLVDHNQHK 220
+ + F +L + LT+ + + L + I +DH+
Sbjct: 248 LVLLNVQNAKA-----WNAF---NLSCKILLTTRFKQVTDFLSAATTTHI--SLDHHS-M 296
Query: 221 LLTLNKARE-----ENIAHGKLP---------------------IDTYLNMKTRQVLAVN 254
LT ++ + + LP + T+ N K +
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356
Query: 255 HVFQILLAI---SSDKKSWKDALLETLPERKNAAAK-------NTGSEDAESCGEEEFEI 304
+ + L + + +K + L P + + D +
Sbjct: 357 TIIESSLNVLEPAEYRKMFDR--LSVFPPSAHIPTILLSLIWFDVIKSDVMVV-VNKLHK 413
Query: 305 KTGGEKSGNE-RCEAESCDRSEHEKKVQDSTCEKKLLECDN 344
+ EK E S K + + +++ N
Sbjct: 414 YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN 454
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 346 | |||
| 4fmw_A | 197 | RNA (guanine-9-)-methyltransferase domain-contain | 100.0 |
| >4fmw_A RNA (guanine-9-)-methyltransferase domain-contain protein 2; structural genomics, structural genomics consortium, SGC, RN modification; HET: SAH; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-69 Score=492.92 Aligned_cols=189 Identities=49% Similarity=0.857 Sum_probs=171.7
Q ss_pred cchHHHHHHhhhcCCCCCeEEEEcCCCcccCHHHHhHHHHHHHHHHHHhhhcCCCCcEEEEcCChhHHHHHHHhc-CCCc
Q psy11622 91 PSRKALKLVKMETSPNKLRVCIDFSFDHLMTQKDICKCVKQFNWCYSLNRRAQHPLQFYVSSFKDKCKQEIARYN-GYEH 169 (346)
Q Consensus 91 ~~rk~~k~~~~~~~~~~~~IvIDcsFddlM~~KEi~SL~~QL~~~Ys~NRr~~~P~~L~lts~~g~l~~~l~k~~-g~~n 169 (346)
++||+.++ ...+++++|||||||+++|+++|+.||++||++|||+||++.+|++|+|||+++.+++.|.++. ||.+
T Consensus 7 ~~~k~~~~---~~~~~~~riviD~sf~~~M~~kE~~sl~~Ql~~~y~~nRr~~~p~~l~~t~~~~~~~~~~~~~~~~~~~ 83 (197)
T 4fmw_A 7 HDRKRVRR---DVVHSTLRLIIDCSFDHLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTSHGGQLKKNMDENDKGWVN 83 (197)
T ss_dssp -------C---CCCCCSCEEEEECTTGGGSCHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESCCHHHHHHHHHHCGGGGT
T ss_pred hhhhHHHH---hhCCCCCEEEEECCchHhcCHHHHHHHHHHHHHHHHHHHcCCCCceEEEeCCChHHHHHHHHhhccCcc
Confidence 34554443 3458899999999999999999999999999999999999999999999999999999998865 8999
Q ss_pred c-ceEEecchhhhccCCCCeEEeCCCCccccccccCCceEEEEeEecCCCChhhhHHHHHHcCCcccccccccccccCCC
Q psy11622 170 W-DVHIHEQAYLDLFKKEDLVYLTSDSDNIIEELDQSKVYIIGGLVDHNQHKLLTLNKAREENIAHGKLPIDTYLNMKTR 248 (346)
Q Consensus 170 W-~v~~~~~~~~elf~k~~iVYLSpDS~~~L~eld~~kvYIIGGIVDrnr~Kglt~~kA~e~GI~taRLPI~eyi~l~~r 248 (346)
| .+++++++|+++|++++||||||||+++|+++++++|||||||||||++||+|+++|+++||+||||||++||+|.++
T Consensus 84 ~~~~~~~~~~~~~~f~~~~iVYLtpDs~~~L~~~~~~~vYIIGGiVD~n~~K~lt~~~A~~~gi~taRLPi~~~i~~~~~ 163 (197)
T 4fmw_A 84 WKDIHIKPEHYSELIKKEDLIYLTSDSPNILKELDESKAYVIGGLVDHNHHKGLTYKQASDYGINHAQLPLGNFVKMNSR 163 (197)
T ss_dssp CSSCEECSSCHHHHSCGGGEEEECTTCSCBCCSCCTTSEEEEECCCCTTSSTTHHHHHHHHHTCEEEBCCCTTTC----C
T ss_pred ccceeecCccHHHhCCcccEEEECCCchhhhhccCCCCEEEEEEEEeCCCCcchhHHHHHHcCCCEEeccccceeecCCC
Confidence 9 799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHhhhCCCCHHHHHHhhCCCCcc
Q psy11622 249 QVLAVNHVFQILLAISSDKKSWKDALLETLPERKN 283 (346)
Q Consensus 249 kVLtiN~V~EILl~~~e~~~DW~eA~~~vIP~RK~ 283 (346)
+|||||||||||++|++ ++||++||.++||+|||
T Consensus 164 kvLtiN~V~eILl~~~~-~~dW~~Al~~viP~RKg 197 (197)
T 4fmw_A 164 KVLAVNHVFEIILEYLE-TRDWQEAFFTILPQRKG 197 (197)
T ss_dssp CCCCHHHHHHHHHHHHH-HCCHHHHHHHHSCCCC-
T ss_pred ccccHHHHHHHHHHHHh-CCCHHHHHHHhCCCCCC
Confidence 99999999999999999 99999999999999997
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00