Psyllid ID: psy11634

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MGYWAYSVTGPRPYVKYFKQLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLESPSEKSNTPVPDIKDV
Secondary Structure (PSIPRED)
cccEEEEEcccccccEEEEEEEcccccEEEEccEEEEEEccEEEEEEEccccccHHHHHHHHHHHHcccccccccccccccccccccccEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccEEEEEEcccEEEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEcccccHHHHEEEEEEEEEEcEEEEccEEEEEcccEEEEEEEEcccccHHHHHHHHHHHHHccEEEccccccccccHHHcccEEEEEEEEEEEEccccccccHHHcccHHHHHHHHHHHHHHHHHHccccEccccEEccEEEEEEEccccEEEEEEcccccccccccccccc
Coil and Loop (DISEMBL)
mgywaysvtgprpyvKYFKQLVKHTPFVCLVDSNVISSIGMGLCILIGisrhdtekDMDYIVNKILKLKIfeneegkrwassvsdkkyEILCISQFTlyhglkgngltfhhamggadsEVFYNKFLEKLKTAydlskvkdgkfgahMSVNIvndgpvtiplespseksntpvpdikdv
Flexible Loop (DISEMBL)
mgywaysvtgprPYVKYFKQLVKHTPFVCLVDSNVISSIGMGLCILIGIsrhdtekdMDYIVNKILKlkifeneegkrwassvsdkkYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGpvtiplespseksntpvpdikdv
Low Complexity Region (SEG)
MGYWAYSVTGPRPYVKYFKQLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLESPSEKSNTPVPDIKDV
Disordered region (IsUnstruct)
**YWAYSVTGPRPYVKYFKQLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPV*********************
Disordered Region (DISOPRED)
********TGPRPYVKYFKQLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIP******************
Disordered Region (DISEMBL)
MGYWAYSVTGPRPYVKYFKQLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEE********SDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLE****************
Disordered Region (DISPRO)
*GYWAYSVTGPRPYVKYFKQLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLESP**************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGYWAYSVTGPRPYVKYFKQLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLESPSEKSNTPVPDIKDV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	178	2.2.26 [Sep-21-2011]
Q8TEA8	209	D-tyrosyl-tRNA(Tyr) deacy	yes	N/A	0.803	0.684	0.552	8e-41
Q2T9V8	209	D-tyrosyl-tRNA(Tyr) deacy	yes	N/A	0.758	0.645	0.570	1e-40
Q9DD18	209	D-tyrosyl-tRNA(Tyr) deacy	yes	N/A	0.758	0.645	0.548	5e-40
Q54EY1	151	D-tyrosyl-tRNA(Tyr) deacy	yes	N/A	0.747	0.880	0.522	3e-32
Q6FT39	149	D-tyrosyl-tRNA(Tyr) deacy	yes	N/A	0.741	0.885	0.455	3e-25
B2TN01	149	D-tyrosyl-tRNA(Tyr) deacy	yes	N/A	0.735	0.879	0.488	6e-25
Q6C7S6	154	D-tyrosyl-tRNA(Tyr) deacy	yes	N/A	0.769	0.889	0.421	9e-25
C3KTC0	149	D-tyrosyl-tRNA(Tyr) deacy	yes	N/A	0.730	0.872	0.470	1e-24
O14274	149	D-tyrosyl-tRNA(Tyr) deacy	yes	N/A	0.719	0.859	0.438	2e-24
B1L0A0	149	D-tyrosyl-tRNA(Tyr) deacy	yes	N/A	0.730	0.872	0.470	2e-24

>sp|Q8TEA8|DTD1_HUMAN D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Homo sapiens GN=DTD1 PE=1 SV=2

 Score =  166 bits (420), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 103/143 (72%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V    IS+IG G+C+L+GIS  DT+K+++++V KIL L++FE+E GK W+ SV DK+YEI
Sbjct: 15  VGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEI 74

Query: 91  LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
           LC+SQFTL   LKGN   FH AM    +E FYN FLE+L+  Y    +KDGKFGA+M V+
Sbjct: 75  LCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVH 134

Query: 151 IVNDGPVTIPLESPSEKSNTPVP 173
           I NDGPVTI LESP+  + T  P
Sbjct: 135 IQNDGPVTIELESPAPGTATSDP 157

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: -EC: .EC: -

>sp|Q2T9V8|DTD1_BOVIN D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Bos taurus GN=DTD1 PE=2 SV=1

 Score =  166 bits (419), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 100/135 (74%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V    IS+IG G+C+L+GIS  DT+K+++++V KIL L++FE+E GK W+ SV DK+YE+
Sbjct: 15  VGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEV 74

Query: 91  LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
           LC+SQFTL   LKGN   FH AM    +E FY  FLE+L+ AY    VKDGKFGA+M V+
Sbjct: 75  LCVSQFTLQCVLKGNKPDFHLAMPAEQAESFYKGFLEQLRKAYRPELVKDGKFGAYMQVH 134

Query: 151 IVNDGPVTIPLESPS 165
           I NDGPVTI LESP+
Sbjct: 135 IQNDGPVTIELESPA 149

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q9DD18|DTD1_MOUSE D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Mus musculus GN=Dtd1 PE=1 SV=2

 Score =  163 bits (413), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 101/135 (74%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V    IS+IG G+C+L+GIS  D++K+++++V KIL L++FE+E GK W+ SV DK+YE+
Sbjct: 15  VGGEQISAIGRGICVLLGISMEDSQKELEHMVRKILNLRVFEDESGKHWSKSVMDKEYEV 74

Query: 91  LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
           LC+SQFTL   LKGN   FH AM    +E FYN FLE+L+ +Y    ++DGKFGA+M V+
Sbjct: 75  LCVSQFTLQCVLKGNKPDFHLAMPTEQAESFYNSFLEQLRKSYRPELIRDGKFGAYMQVH 134

Query: 151 IVNDGPVTIPLESPS 165
           I NDGPVTI LESP+
Sbjct: 135 IQNDGPVTIELESPA 149

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q54EY1|DTD_DICDI D-tyrosyl-tRNA(Tyr) deacylase OS=Dictyostelium discoideum GN=dtd PE=3 SV=1

 Score =  137 bits (346), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/134 (52%), Positives = 90/134 (67%), Gaps = 1/134 (0%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEG-KRWASSVSDKKYE 89
           V+  VIS I  GL  LIGI R DT++D +YI  KIL L++++NE+G K W  SV    YE
Sbjct: 15  VEGEVISEIKQGLMCLIGIGRDDTKEDAEYITRKILNLRLWKNEDGTKNWDRSVQQMDYE 74

Query: 90  ILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           IL +SQFTL+  LKGN  ++H AM    S+ FY  FLE  K +Y   K+KDG+FGA M V
Sbjct: 75  ILFVSQFTLFAQLKGNKQSYHLAMAPELSKQFYLDFLENAKKSYKPEKIKDGRFGAMMDV 134

Query: 150 NIVNDGPVTIPLES 163
            ++NDGPVTI L+S
Sbjct: 135 QLINDGPVTIQLDS 148

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q6FT39|DTD_CANGA D-tyrosyl-tRNA(Tyr) deacylase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DTD1 PE=3 SV=1

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 2/134 (1%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD+ ++S I  G  +L+GIS  DT  D   + NK+L L++FE  + + W  S+ D + EI
Sbjct: 15  VDNEIVSQIAKGYMLLVGISTEDTIADAQKLSNKVLNLRLFETGD-QFWKHSIQDVQGEI 73

Query: 91  LCISQFTLY-HGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTL     KGN   FH A  G  ++  YN+FL+ LKT     KVKDG+FGA MS 
Sbjct: 74  LSVSQFTLMARTKKGNKPDFHKAQKGEHAQELYNQFLDLLKTTLGADKVKDGQFGAMMSC 133

Query: 150 NIVNDGPVTIPLES 163
           ++ N+GPVTI L+S
Sbjct: 134 SLTNEGPVTIILDS 147

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|B2TN01|DTD_CLOBB D-tyrosyl-tRNA(Tyr) deacylase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=dtd PE=3 SV=1

 Score =  113 bits (282), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/135 (48%), Positives = 88/135 (65%), Gaps = 4/135 (2%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD N++ SIG GL +LIGIS+ DT +D+ YI +K++ L+IFE+E+ K    S+ D K E+
Sbjct: 15  VDGNIVGSIGRGLNVLIGISKSDTLQDLKYIRDKVINLRIFEDEKDK-MNLSILDVKGEL 73

Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L ISQFTLY    KG    F  A GG ++E  Y +FL  LK +    K++ G+FGA M V
Sbjct: 74  LVISQFTLYGDCRKGRRPNFMEAKGGEEAEGLYKEFLSLLKESN--IKIETGEFGADMKV 131

Query: 150 NIVNDGPVTIPLESP 164
            I NDGPVTI L+S 
Sbjct: 132 EINNDGPVTIILDSS 146

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Clostridium botulinum (strain Eklund 17B / Type B) (taxid: 508765)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q6C7S6|DTD_YARLI D-tyrosyl-tRNA(Tyr) deacylase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DTD1 PE=3 SV=1

 Score =  112 bits (281), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 91/140 (65%), Gaps = 3/140 (2%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEG-KRWASSVSDKKYE 89
           VDS ++S I  GL +LIG+   DT +D++ + NKI+K K++ + +G ++W  SV D   E
Sbjct: 15  VDSKIVSQISHGLVVLIGVGHEDTAEDVEKVANKIIKTKLWPSVDGAQQWKQSVLDVGGE 74

Query: 90  ILCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSK-VKDGKFGAHM 147
           +LC+SQFTL+  + KG    FH+A  G  ++  Y++ L K++ A    + VKDG FGA M
Sbjct: 75  VLCVSQFTLFAKVKKGQKPDFHNAAKGPQAKELYDQVLAKIQAALPEGRTVKDGVFGAMM 134

Query: 148 SVNIVNDGPVTIPLESPSEK 167
            V +VNDGPVTI  ++ ++K
Sbjct: 135 DVALVNDGPVTIQYDTKNDK 154

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|C3KTC0|DTD_CLOB6 D-tyrosyl-tRNA(Tyr) deacylase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=dtd PE=3 SV=1

 Score =  112 bits (280), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/134 (47%), Positives = 90/134 (67%), Gaps = 4/134 (2%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD  VI SIG GL +L+GIS+ DTE+D+ Y+  KI+ L+IFE+ E ++   S+ D   +I
Sbjct: 15  VDGKVIGSIGKGLNVLLGISKEDTEEDIKYLKEKIINLRIFED-ENEKLNKSLLDIGGDI 73

Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           + +SQFTLY    KG   +F  A+GG ++ + YNKF+E +K   +++ V  G+FGA M V
Sbjct: 74  IIVSQFTLYGDCRKGRRPSFIEALGGEEASILYNKFVESIKK--EVNNVATGEFGADMKV 131

Query: 150 NIVNDGPVTIPLES 163
            I NDGPVTI L+S
Sbjct: 132 YIENDGPVTILLDS 145

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Clostridium botulinum (strain 657 / Type Ba4) (taxid: 515621)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|O14274|DTD_SCHPO D-tyrosyl-tRNA(Tyr) deacylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dtd1 PE=3 SV=1

 Score =  112 bits (279), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 86/130 (66%), Gaps = 2/130 (1%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD  ++S+I  G CIL+G+   DT +D+  + NKILKLK+F+N E + W S+++D + EI
Sbjct: 15  VDDKIVSAIQQGYCILLGVGSDDTPEDVTKLSNKILKLKLFDNAE-QPWKSTIADIQGEI 73

Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           LC+SQFTL+  + KG    FH +M G ++   Y + ++ L  +    K+K G FGA M+V
Sbjct: 74  LCVSQFTLHARVNKGAKPDFHRSMKGPEAIELYEQVVKTLGESLGSDKIKKGVFGAMMNV 133

Query: 150 NIVNDGPVTI 159
            +VN+GPVTI
Sbjct: 134 QLVNNGPVTI 143

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|B1L0A0|DTD_CLOBM D-tyrosyl-tRNA(Tyr) deacylase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=dtd PE=3 SV=1

 Score =  112 bits (279), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/134 (47%), Positives = 90/134 (67%), Gaps = 4/134 (2%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD  VI SIG GL +L+GIS+ DTE+D+ Y+  KI+ L+IFE+ E ++   S+ D   +I
Sbjct: 15  VDGKVIGSIGKGLNVLLGISKEDTEEDIKYLKEKIINLRIFED-ENEKLNKSLLDIGGDI 73

Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           + +SQFTLY    KG   +F  A+GG ++ + YNKF+E +K   +++ V  G+FGA M V
Sbjct: 74  IIVSQFTLYGDCRKGRRPSFIEALGGEEAYILYNKFIESIKK--EVNNVATGEFGADMKV 131

Query: 150 NIVNDGPVTIPLES 163
            I NDGPVTI L+S
Sbjct: 132 YIENDGPVTILLDS 145

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Clostridium botulinum (strain Loch Maree / Type A3) (taxid: 498214)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
260822463	148	hypothetical protein BRAFLDRAFT_262426 [	0.752	0.905	0.582	1e-42
72081196	329	PREDICTED: uncharacterized protein LOC59	0.764	0.413	0.595	6e-42
156406660	178	predicted protein [Nematostella vectensi	0.820	0.820	0.564	2e-41
307204045	166	D-tyrosyl-tRNA(Tyr) deacylase 1 [Harpegn	0.820	0.879	0.601	5e-41
195571753	158	GD18754 [Drosophila simulans] gi|1941997	0.814	0.917	0.574	2e-40
66772027	158	IP04468p [Drosophila melanogaster]	0.814	0.917	0.567	2e-40
307189815	152	D-tyrosyl-tRNA(Tyr) deacylase 1 [Campono	0.758	0.888	0.622	2e-40
195329850	158	GM23944 [Drosophila sechellia] gi|194120	0.814	0.917	0.567	5e-40
281361569	158	CG18643 [Drosophila melanogaster] gi|667	0.814	0.917	0.560	5e-40
195500052	158	GE26095 [Drosophila yakuba] gi|194183310	0.814	0.917	0.560	7e-40

>gi|260822463|ref|XP_002606621.1| hypothetical protein BRAFLDRAFT_262426 [Branchiostoma floridae] gi|229291965|gb|EEN62631.1| hypothetical protein BRAFLDRAFT_262426 [Branchiostoma floridae]

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 78/134 (58%), Positives = 103/134 (76%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V   ++SSIG GLC+LIG+SR D+ KDM+YIV KIL L++F++++ KRWA SV DK YEI
Sbjct: 15  VGDELVSSIGRGLCVLIGVSRDDSPKDMEYIVRKILNLRVFDDDQEKRWAHSVKDKNYEI 74

Query: 91  LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
           LC+SQFTLY  LKGN   FH +M    S+ FY +FL++++ AY   K+KDG+FGA+M V+
Sbjct: 75  LCVSQFTLYCVLKGNKPDFHQSMAAEQSQAFYEEFLQQMRKAYQPDKIKDGRFGAYMQVS 134

Query: 151 IVNDGPVTIPLESP 164
           I NDGPVT+ LESP
Sbjct: 135 IQNDGPVTVQLESP 148

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|72081196|ref|XP_796744.1| PREDICTED: uncharacterized protein LOC592111 [Strongylocentrotus purpuratus]

 Score =  175 bits (444), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 81/136 (59%), Positives = 103/136 (75%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V   +ISSIG GLCIL+GIS+ DT K+ +YIV KIL L++F++E  KRWA SV DK+ EI
Sbjct: 15  VGDELISSIGRGLCILVGISKDDTPKEREYIVRKILNLRVFDDENDKRWAKSVKDKQLEI 74

Query: 91  LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
           LC+SQFTLY  LKGN   FH AM G  S+ +YN+FL+ L+  Y+  K+KDG+FGAHM V+
Sbjct: 75  LCVSQFTLYSILKGNKPDFHQAMPGDQSQTYYNEFLDMLRKDYNPDKIKDGQFGAHMQVH 134

Query: 151 IVNDGPVTIPLESPSE 166
           I NDGPVTI L+SP +
Sbjct: 135 IQNDGPVTIQLDSPPD 150

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|156406660|ref|XP_001641163.1| predicted protein [Nematostella vectensis] gi|156228300|gb|EDO49100.1| predicted protein [Nematostella vectensis]

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/147 (56%), Positives = 111/147 (75%), Gaps = 1/147 (0%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V+  VISSIG GLC+L+GISR DT  +M+Y+V KIL L++F+ + GKRW  +V DK+YE+
Sbjct: 15  VEGEVISSIGKGLCVLLGISRDDTTGEMEYMVRKILNLRVFD-DNGKRWKKNVMDKEYEV 73

Query: 91  LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
           LCISQFTLY+ LKGN L FH AMGG DS+ FY +FL++++ +Y    +KDG FGA+M V+
Sbjct: 74  LCISQFTLYNILKGNKLDFHLAMGGDDSKQFYEEFLQQMRKSYKPEAIKDGIFGAYMQVD 133

Query: 151 IVNDGPVTIPLESPSEKSNTPVPDIKD 177
           I NDGPVTI LE+P +K++    D  D
Sbjct: 134 IQNDGPVTINLEAPIQKNHKNQQDSAD 160

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|307204045|gb|EFN82949.1| D-tyrosyl-tRNA(Tyr) deacylase 1 [Harpegnathos saltator]

 Score =  172 bits (436), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 89/148 (60%), Positives = 108/148 (72%), Gaps = 2/148 (1%)

Query: 30  LVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYE 89
           LVD  VISSIG GLCILIGI R D   D++YIV KIL  KIF+ + GKRW++SV DKKYE
Sbjct: 14  LVDGEVISSIGNGLCILIGIKRDDGRADVEYIVRKILNTKIFD-DNGKRWSASVMDKKYE 72

Query: 90  ILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           ILCISQFTLYH LKGN L FH AM   +SE FY  FL +L+  Y    +KDGKFGA M +
Sbjct: 73  ILCISQFTLYHILKGNKLDFHRAMSAQESEPFYMNFLAELRKKYSPELIKDGKFGAMMEI 132

Query: 150 NIVNDGPVTIPLESPSEK-SNTPVPDIK 176
           +I N+GPVT+ +ESP++  SN  V +I+
Sbjct: 133 SIHNNGPVTLEIESPTKSISNDDVVNIE 160

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195571753|ref|XP_002103867.1| GD18754 [Drosophila simulans] gi|194199794|gb|EDX13370.1| GD18754 [Drosophila simulans]

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/148 (57%), Positives = 105/148 (70%), Gaps = 3/148 (2%)

Query: 20  QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRW 79
           Q VK      L    ++SSIG GLC+L+GI   DT KD++Y+V KIL L++FE EEGKRW
Sbjct: 6   QRVKAAKVTVL--DELVSSIGPGLCVLVGIKASDTAKDVEYLVRKILALRLFE-EEGKRW 62

Query: 80  ASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVK 139
             SV D   E+LC+SQFTLYH LKGN   F  AM G D++  YN FL++L  +YD SK+K
Sbjct: 63  QKSVKDLNLELLCVSQFTLYHRLKGNKPDFSAAMKGEDAQELYNHFLDRLGQSYDSSKIK 122

Query: 140 DGKFGAHMSVNIVNDGPVTIPLESPSEK 167
           DGKFGA+M V+I NDGPVTI LESP +K
Sbjct: 123 DGKFGAYMQVHIENDGPVTINLESPEQK 150

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66772027|gb|AAY55325.1| IP04468p [Drosophila melanogaster]

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 106/148 (71%), Gaps = 3/148 (2%)

Query: 20  QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRW 79
           Q VK      L    ++SSIG GLC+L+GI   DT KD++Y+V KIL L++FE EEGKRW
Sbjct: 6   QRVKAAKVTVL--DELVSSIGPGLCVLVGIKASDTAKDVEYLVRKILALRLFE-EEGKRW 62

Query: 80  ASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVK 139
             SV D   E+LC+SQFTLYH LKGN   F  AM G +++  YN+FL++L  +YD SK+K
Sbjct: 63  QKSVKDLNLELLCVSQFTLYHRLKGNKPDFSAAMKGEEAQELYNQFLDRLGQSYDSSKIK 122

Query: 140 DGKFGAHMSVNIVNDGPVTIPLESPSEK 167
           DGKFGA+M V+I NDGPVTI LESP +K
Sbjct: 123 DGKFGAYMQVHIENDGPVTINLESPEQK 150

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189815|gb|EFN74087.1| D-tyrosyl-tRNA(Tyr) deacylase 1 [Camponotus floridanus]

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/135 (62%), Positives = 99/135 (73%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD  VISSIG GLC+LIGI + D   DM+YIV KIL  K+F+ ++GK+W +SV DKKYEI
Sbjct: 15  VDGEVISSIGNGLCVLIGIKKGDEAVDMEYIVRKILNTKLFDGDKGKKWGASVVDKKYEI 74

Query: 91  LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
           LCISQFTLYH LKGN L FH AM   +SE FY  FL +L+T Y    VKDGKFGA M V 
Sbjct: 75  LCISQFTLYHVLKGNKLDFHRAMPAQESEPFYMNFLAELRTKYIPELVKDGKFGAMMEVC 134

Query: 151 IVNDGPVTIPLESPS 165
           I N GPVT+ +ESP+
Sbjct: 135 IQNSGPVTLEIESPT 149

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195329850|ref|XP_002031623.1| GM23944 [Drosophila sechellia] gi|194120566|gb|EDW42609.1| GM23944 [Drosophila sechellia]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 105/148 (70%), Gaps = 3/148 (2%)

Query: 20  QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRW 79
           Q VK      L    ++SSIG GLC+L+GI   DT KD++Y+V KIL L++FE EEGKRW
Sbjct: 6   QRVKAAKVTVL--DELVSSIGPGLCVLVGIKASDTAKDVEYLVRKILALRLFE-EEGKRW 62

Query: 80  ASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVK 139
             SV D   E+LC+SQFTLYH LKGN   F  AM G +++  YN FL++L  +YD SK+K
Sbjct: 63  QKSVKDLNLELLCVSQFTLYHRLKGNKPDFSAAMKGEEAQELYNHFLDRLGQSYDSSKIK 122

Query: 140 DGKFGAHMSVNIVNDGPVTIPLESPSEK 167
           DGKFGA+M V+I NDGPVTI LESP +K
Sbjct: 123 DGKFGAYMQVHIENDGPVTINLESPEQK 150

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|281361569|ref|NP_650072.2| CG18643 [Drosophila melanogaster] gi|66770797|gb|AAY54710.1| IP04668p [Drosophila melanogaster] gi|272476926|gb|AAF54636.2| CG18643 [Drosophila melanogaster]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 106/148 (71%), Gaps = 3/148 (2%)

Query: 20  QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRW 79
           Q VK      L    ++SSIG GLC+L+GI   DT KD++Y+V KIL L++FE EEGKRW
Sbjct: 6   QRVKAAKVTVL--DELVSSIGPGLCVLVGIKASDTAKDVEYLVRKILALRLFE-EEGKRW 62

Query: 80  ASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVK 139
             SV D   E+LC+SQFTLYH LKGN   F  AM G +++  YN+FL++L  +YD +K+K
Sbjct: 63  QKSVKDLNLELLCVSQFTLYHRLKGNKPDFLAAMKGEEAQELYNQFLDRLGQSYDSTKIK 122

Query: 140 DGKFGAHMSVNIVNDGPVTIPLESPSEK 167
           DGKFGA+M V+I NDGPVTI LESP +K
Sbjct: 123 DGKFGAYMQVHIENDGPVTINLESPEQK 150

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195500052|ref|XP_002097209.1| GE26095 [Drosophila yakuba] gi|194183310|gb|EDW96921.1| GE26095 [Drosophila yakuba]

 Score =  168 bits (426), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 105/148 (70%), Gaps = 3/148 (2%)

Query: 20  QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRW 79
           Q VK      L    ++SS+G GLC+L+GI   DT KD++Y+V KIL L++FE EEGKRW
Sbjct: 6   QRVKAAKVTVL--DELVSSVGPGLCVLVGIKASDTAKDVEYLVRKILALRLFE-EEGKRW 62

Query: 80  ASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVK 139
             SV D   E+LC+SQFTLYH LKGN   F  AM G +++  YN FL++L  +YD SK+K
Sbjct: 63  QKSVKDLNLELLCVSQFTLYHRLKGNKPDFSAAMKGEEAQELYNHFLDRLGQSYDSSKIK 122

Query: 140 DGKFGAHMSVNIVNDGPVTIPLESPSEK 167
           DGKFGA+M V+I NDGPVTI LESP +K
Sbjct: 123 DGKFGAYMQVHIENDGPVTINLESPEQK 150

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
FB|FBgn0037898	158	CG18643 [Drosophila melanogast	0.775	0.873	0.578	1.8e-39
UNIPROTKB|F1SBH1	209	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.803	0.684	0.552	2.1e-38
UNIPROTKB|E1BRV8	207	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.758	0.652	0.570	4.3e-38
UNIPROTKB|Q8TEA8	209	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.803	0.684	0.552	4.3e-38
UNIPROTKB|J9P7T2	314	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.803	0.455	0.545	8.9e-38
UNIPROTKB|Q2T9V8	209	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.758	0.645	0.570	1.5e-37
MGI|MGI:1913294	209	Dtd1 "D-tyrosyl-tRNA deacylase	0.758	0.645	0.548	3.9e-37
RGD|1311821	174	Dtd1 "D-tyrosyl-tRNA deacylase	0.758	0.775	0.548	6.3e-37
ZFIN|ZDB-GENE-040801-175	207	hars2 "histidyl-tRNA synthetas	0.752	0.647	0.552	8.3e-35
WB|WBGene00004151	150	pqn-68 [Caenorhabditis elegans	0.764	0.906	0.532	2.8e-34

FB|FBgn0037898 CG18643 [Drosophila melanogaster (taxid:7227)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 81/140 (57%), Positives = 106/140 (75%)

Query:    28 VCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKK 87
             V ++D  ++SSIG GLC+L+GI   DT KD++Y+V KIL L++FE EEGKRW  SV D  
Sbjct:    13 VTVLDE-LVSSIGPGLCVLVGIKASDTAKDVEYLVRKILALRLFE-EEGKRWQKSVKDLN 70

Query:    88 YEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHM 147
              E+LC+SQFTLYH LKGN   F  AM G +++  YN+FL++L  +YD +K+KDGKFGA+M
Sbjct:    71 LELLCVSQFTLYHRLKGNKPDFLAAMKGEEAQELYNQFLDRLGQSYDSTKIKDGKFGAYM 130

Query:   148 SVNIVNDGPVTIPLESPSEK 167
              V+I NDGPVTI LESP +K
Sbjct:   131 QVHIENDGPVTINLESPEQK 150

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|F1SBH1 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase" [Sus scrofa (taxid:9823)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 79/143 (55%), Positives = 104/143 (72%)

Query:    31 VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
             V    IS+IG G+C+L+GIS  DT+K+++++V KIL L++FE+E G+ WA SV DK+YE+
Sbjct:    15 VGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDEGGRHWAKSVMDKQYEV 74

Query:    91 LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
             LC+SQFTL   LKGN   FH AM    +E FYN FLE+L+ AY    +KDGKFGA+M V+
Sbjct:    75 LCVSQFTLQCVLKGNKPDFHLAMPSEQAEGFYNSFLEQLRKAYRPELIKDGKFGAYMQVH 134

Query:   151 IVNDGPVTIPLESPSEKSNTPVP 173
             I NDGPVTI LESP+  + T  P
Sbjct:   135 IQNDGPVTIELESPAPGAATSDP 157

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

UNIPROTKB|E1BRV8 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase" [Gallus gallus (taxid:9031)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 77/135 (57%), Positives = 101/135 (74%)

Query:    31 VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
             V    ISSIG GLC+L+GIS  DT+++++++V KIL L++FE+E GK W+ SV DK+YE+
Sbjct:    15 VGGEQISSIGRGLCVLLGISLEDTQRELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEV 74

Query:    91 LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
             LC+SQFTL   LKGN   +H AM    +E FYN FLE+L+ AY    +KDGKFGA+M V+
Sbjct:    75 LCVSQFTLQCILKGNKPDYHMAMPTEQAESFYNNFLEQLRKAYKPELIKDGKFGAYMQVH 134

Query:   151 IVNDGPVTIPLESPS 165
             I NDGPVTI LESP+
Sbjct:   135 IQNDGPVTIELESPA 149

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|Q8TEA8 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase 1" [Homo sapiens (taxid:9606)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 79/143 (55%), Positives = 103/143 (72%)

Query:    31 VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
             V    IS+IG G+C+L+GIS  DT+K+++++V KIL L++FE+E GK W+ SV DK+YEI
Sbjct:    15 VGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEI 74

Query:    91 LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
             LC+SQFTL   LKGN   FH AM    +E FYN FLE+L+  Y    +KDGKFGA+M V+
Sbjct:    75 LCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVH 134

Query:   151 IVNDGPVTIPLESPSEKSNTPVP 173
             I NDGPVTI LESP+  + T  P
Sbjct:   135 IQNDGPVTIELESPAPGTATSDP 157

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|J9P7T2 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase" [Canis lupus familiaris (taxid:9615)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 78/143 (54%), Positives = 102/143 (71%)

Query:    31 VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
             V    IS+IG G+C+L+GIS  DT+K+++++V KIL L++FE+E GK W+ SV DK+YE+
Sbjct:   120 VGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEV 179

Query:    91 LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
             LCISQFTL   LKGN   FH AM    +E FYN FLE+L+  Y    +KDGKFG +M V+
Sbjct:   180 LCISQFTLQCVLKGNKPDFHLAMPTEQAESFYNSFLEQLRKTYRPELIKDGKFGTYMQVH 239

Query:   151 IVNDGPVTIPLESPSEKSNTPVP 173
             I NDGPVTI LESP+  + T  P
Sbjct:   240 IQNDGPVTIELESPAPGAATSDP 262

GO:0005737 "cytoplasm" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

UNIPROTKB|Q2T9V8 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase 1" [Bos taurus (taxid:9913)]

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 77/135 (57%), Positives = 100/135 (74%)

Query:    31 VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
             V    IS+IG G+C+L+GIS  DT+K+++++V KIL L++FE+E GK W+ SV DK+YE+
Sbjct:    15 VGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEV 74

Query:    91 LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
             LC+SQFTL   LKGN   FH AM    +E FY  FLE+L+ AY    VKDGKFGA+M V+
Sbjct:    75 LCVSQFTLQCVLKGNKPDFHLAMPAEQAESFYKGFLEQLRKAYRPELVKDGKFGAYMQVH 134

Query:   151 IVNDGPVTIPLESPS 165
             I NDGPVTI LESP+
Sbjct:   135 IQNDGPVTIELESPA 149

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

MGI|MGI:1913294 Dtd1 "D-tyrosyl-tRNA deacylase 1" [Mus musculus (taxid:10090)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 74/135 (54%), Positives = 101/135 (74%)

Query:    31 VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
             V    IS+IG G+C+L+GIS  D++K+++++V KIL L++FE+E GK W+ SV DK+YE+
Sbjct:    15 VGGEQISAIGRGICVLLGISMEDSQKELEHMVRKILNLRVFEDESGKHWSKSVMDKEYEV 74

Query:    91 LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
             LC+SQFTL   LKGN   FH AM    +E FYN FLE+L+ +Y    ++DGKFGA+M V+
Sbjct:    75 LCVSQFTLQCVLKGNKPDFHLAMPTEQAESFYNSFLEQLRKSYRPELIRDGKFGAYMQVH 134

Query:   151 IVNDGPVTIPLESPS 165
             I NDGPVTI LESP+
Sbjct:   135 IQNDGPVTIELESPA 149

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

RGD|1311821 Dtd1 "D-tyrosyl-tRNA deacylase 1" [Rattus norvegicus (taxid:10116)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 74/135 (54%), Positives = 100/135 (74%)

Query:    31 VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
             V    IS+IG G+C+L+GIS  DT+K+++++V KIL L++FE+E GK W+ SV DK+YE+
Sbjct:    15 VGGEQISAIGRGICVLLGISMEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKEYEV 74

Query:    91 LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
             LC+SQFTL   LKGN    H AM    +E FYN FLE+L+ +Y    ++DGKFGA+M V+
Sbjct:    75 LCVSQFTLQCVLKGNKPDLHLAMPTEQAESFYNSFLEQLRKSYRPELIRDGKFGAYMQVH 134

Query:   151 IVNDGPVTIPLESPS 165
             I NDGPVTI LESP+
Sbjct:   135 IQNDGPVTIELESPA 149

GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

ZFIN|ZDB-GENE-040801-175 hars2 "histidyl-tRNA synthetase 2, mitochondrial (putative)" [Danio rerio (taxid:7955)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 74/134 (55%), Positives = 94/134 (70%)

Query:    31 VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
             V    ISSIG GLC+L+GIS  DT+KD+DY+V KIL L++FE+E G+ W+ SV D + E+
Sbjct:    15 VGEEQISSIGRGLCVLLGISAEDTQKDVDYMVRKILNLRVFEDENGRAWSRSVMDGELEV 74

Query:    91 LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
             LC+SQFTL   LKGN   +H AM    ++ FYN  LE+L+  Y    +KDG+FGA M V 
Sbjct:    75 LCVSQFTLQCLLKGNKPDYHAAMPAELAQPFYNNMLEQLRETYKPELIKDGQFGAKMQVL 134

Query:   151 IVNDGPVTIPLESP 164
             I NDGPVTI LESP
Sbjct:   135 IQNDGPVTIQLESP 148

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

WB|WBGene00004151 pqn-68 [Caenorhabditis elegans (taxid:6239)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 73/137 (53%), Positives = 91/137 (66%)

Query:    31 VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
             V   V+ SIG GLC+L+G+ R DTE+DM YI+ KIL L++F   E K W  SV D   E+
Sbjct:    15 VGDEVVGSIGRGLCVLVGVHRDDTEEDMKYIIRKILNLRVFPASEQKPWDKSVMDLDLEV 74

Query:    91 LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
             L +SQFTLY   KGN L FH AM   ++  FY  FLE +K AY   K++DGKF A MSV+
Sbjct:    75 LSVSQFTLYGQFKGNKLDFHTAMAPTEASKFYASFLEAMKKAYKADKIQDGKFAAMMSVD 134

Query:   151 IVNDGPVTIPLESPSEK 167
             IVNDGPVT+  +S  EK
Sbjct:   135 IVNDGPVTVTFDS-KEK 150

GO:0005737 "cytoplasm" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q54EY1	DTD_DICDI	3, ., 1, ., -, ., -	0.5223	0.7471	0.8807	yes	N/A
B1L7X6	DTD_THESQ	3, ., 1, ., -, ., -	0.4148	0.7359	0.8791	yes	N/A
Q0TP24	DTD_CLOP1	3, ., 1, ., -, ., -	0.4179	0.7303	0.8724	yes	N/A
A0PZW6	DTD_CLONN	3, ., 1, ., -, ., -	0.4233	0.7471	0.8926	yes	N/A
B9ML29	DTD_CALBD	3, ., 1, ., -, ., -	0.4296	0.7359	0.8791	yes	N/A
B1L0A0	DTD_CLOBM	3, ., 1, ., -, ., -	0.4701	0.7303	0.8724	yes	N/A
Q97GU2	DTD_CLOAB	3, ., 1, ., -, ., -	0.4626	0.7303	0.8724	yes	N/A
Q2T9V8	DTD1_BOVIN	3, ., 1, ., -, ., -	0.5703	0.7584	0.6459	yes	N/A
B9KAP7	DTD_THENN	3, ., 1, ., -, ., -	0.4148	0.7359	0.8791	yes	N/A
A7GT88	DTD_BACCN	3, ., 1, ., -, ., -	0.4402	0.7303	0.8904	yes	N/A
A5I6D9	DTD_CLOBH	3, ., 1, ., -, ., -	0.4701	0.7303	0.8724	yes	N/A
C3KTC0	DTD_CLOB6	3, ., 1, ., -, ., -	0.4701	0.7303	0.8724	yes	N/A
B2TN01	DTD_CLOBB	3, ., 1, ., -, ., -	0.4888	0.7359	0.8791	yes	N/A
O66742	DTD_AQUAE	3, ., 1, ., -, ., -	0.4626	0.7303	0.8783	yes	N/A
Q6FT39	DTD_CANGA	3, ., 1, ., -, ., -	0.4552	0.7415	0.8859	yes	N/A
B7HQG5	DTD_BACC7	3, ., 1, ., -, ., -	0.4402	0.7303	0.8904	yes	N/A
B2V347	DTD_CLOBA	3, ., 1, ., -, ., -	0.4666	0.7359	0.8791	yes	N/A
B8HUW5	DTD_CYAP4	3, ., 1, ., -, ., -	0.4295	0.7640	0.8662	yes	N/A
C1FKE9	DTD_CLOBJ	3, ., 1, ., -, ., -	0.4701	0.7303	0.8724	yes	N/A
A7FY07	DTD_CLOB1	3, ., 1, ., -, ., -	0.4701	0.7303	0.8724	yes	N/A
A4XI81	DTD_CALS8	3, ., 1, ., -, ., -	0.4344	0.7808	0.9328	yes	N/A
Q892A9	DTD_CLOTE	3, ., 1, ., -, ., -	0.4776	0.7303	0.8724	yes	N/A
Q9DD18	DTD1_MOUSE	3, ., 1, ., -, ., -	0.5481	0.7584	0.6459	yes	N/A
A7GHS6	DTD_CLOBL	3, ., 1, ., -, ., -	0.4701	0.7303	0.8724	yes	N/A
A5N1Z2	DTD_CLOK5	3, ., 1, ., -, ., -	0.4592	0.7359	0.8791	yes	N/A
B0S1I7	DTD_FINM2	3, ., 1, ., -, ., -	0.4326	0.7359	0.8851	yes	N/A
Q0SRP4	DTD_CLOPS	3, ., 1, ., -, ., -	0.4179	0.7303	0.8724	yes	N/A
Q8XJ24	DTD_CLOPE	3, ., 1, ., -, ., -	0.4179	0.7303	0.8724	yes	N/A
C0ZAQ1	DTD_BREBN	3, ., 1, ., -, ., -	0.4328	0.7303	0.8965	yes	N/A
A6LML3	DTD_THEM4	3, ., 1, ., -, ., -	0.4262	0.6685	0.7933	yes	N/A
Q634D8	DTD_BACCZ	3, ., 1, ., -, ., -	0.4402	0.7303	0.8904	yes	N/A
Q6C7S6	DTD_YARLI	3, ., 1, ., -, ., -	0.4214	0.7696	0.8896	yes	N/A
Q67LN1	DTD_SYMTH	3, ., 1, ., -, ., -	0.4029	0.7303	0.8609	yes	N/A
Q8TEA8	DTD1_HUMAN	3, ., 1, ., -, ., -	0.5524	0.8033	0.6842	yes	N/A
Q07648	DTD_YEAST	3, ., 1, ., -, ., -	0.4236	0.8033	0.9533	yes	N/A
Q2NG79	DTD_METST	3, ., 1, ., -, ., -	0.4060	0.7191	0.8648	yes	N/A
Q47K67	DTD_DECAR	3, ., 1, ., -, ., -	0.3805	0.7359	0.8733	yes	N/A
A9KK74	DTD_CLOPH	3, ., 1, ., -, ., -	0.4420	0.7528	0.8993	yes	N/A
Q8KBF6	DTD_CHLTE	3, ., 1, ., -, ., -	0.4418	0.7078	0.84	yes	N/A
A6LTN7	DTD_CLOB8	3, ., 1, ., -, ., -	0.4812	0.7247	0.8657	yes	N/A
B1IME1	DTD_CLOBK	3, ., 1, ., -, ., -	0.4701	0.7303	0.8724	yes	N/A
O14274	DTD_SCHPO	3, ., 1, ., -, ., -	0.4384	0.7191	0.8590	yes	N/A
Q4L6X8	DTD_STAHJ	3, ., 1, ., -, ., -	0.3907	0.8258	0.98	yes	N/A
B9IYY0	DTD_BACCQ	3, ., 1, ., -, ., -	0.4402	0.7303	0.8904	yes	N/A
Q6CRI9	DTD_KLULA	3, ., 1, ., -, ., -	0.3970	0.7584	0.9	yes	N/A
B3QL07	DTD_CHLP8	3, ., 1, ., -, ., -	0.4496	0.7078	0.8456	yes	N/A
B1XM75	DTD_SYNP2	3, ., 1, ., -, ., -	0.3909	0.7303	0.8609	yes	N/A
B3QTV8	DTD_CHLT3	3, ., 1, ., -, ., -	0.3961	0.8370	0.9802	yes	N/A
A3DF46	DTD_CLOTH	3, ., 1, ., -, ., -	0.4379	0.7471	0.8926	yes	N/A
B7K3F6	DTD_CYAP8	3, ., 1, ., -, ., -	0.4104	0.7303	0.8843	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	178
PTZ00120	154	PTZ00120, PTZ00120, D-tyrosyl-tRNA(Tyr) deacylase;	5e-61
cd00563	145	cd00563, Dtyr_deacylase, D-Tyrosyl-tRNAtyr deacyla	3e-59
pfam02580	144	pfam02580, Tyr_Deacylase, D-Tyr-tRNA(Tyr) deacylas	8e-54
PRK05273	147	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase;	2e-49
COG1490	145	COG1490, Dtd, D-Tyr-tRNAtyr deacylase [Translation	3e-49
TIGR00256	145	TIGR00256, TIGR00256, D-tyrosyl-tRNA(Tyr) deacylas	1e-33

>gnl|CDD|185458 PTZ00120, PTZ00120, D-tyrosyl-tRNA(Tyr) deacylase; Provisional

 Score =  185 bits (473), Expect = 5e-61
 Identities = 70/139 (50%), Positives = 93/139 (66%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V+  V+ SIG GL +L+GI   DT +D DYI+ K LKL+++ +E GK W  SV DK YE+
Sbjct: 15  VEGEVVGSIGKGLVLLVGIHEEDTWEDADYIIRKCLKLRLWPDEGGKMWDRSVKDKDYEV 74

Query: 91  LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
           L +SQFTL++  KGN   FH AM   D+   YNKF+EK K  Y   K+K GKFG +M+V+
Sbjct: 75  LVVSQFTLFNVKKGNKPDFHLAMSPEDALPLYNKFVEKFKKEYAPEKIKTGKFGQYMNVS 134

Query: 151 IVNDGPVTIPLESPSEKSN 169
           +VNDGPVTI L+S  +   
Sbjct: 135 LVNDGPVTIILDSKEKNLA 153

Length = 154

>gnl|CDD|238316 cd00563, Dtyr_deacylase, D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but not in archea; beta barrel-like fold structure; forms homodimers in which two surface cavities serve as the active site for tRNA binding

 Score =  181 bits (461), Expect = 3e-59
 Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 4/134 (2%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD  V+ +IG GL +L+G++  DTE+D +Y+  KIL L+IFE+EEGK    SV D   EI
Sbjct: 15  VDGEVVGAIGQGLLVLVGVTHDDTEEDAEYLARKILNLRIFEDEEGKMN-LSVKDVNGEI 73

Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTLY    KG   +F  A     +E  Y  F+E L+      KV+ G FGA M V
Sbjct: 74  LVVSQFTLYADTKKGRRPSFSAAAPPDKAEPLYESFVELLREKGI--KVETGVFGAMMQV 131

Query: 150 NIVNDGPVTIPLES 163
           ++VNDGPVTI L+S
Sbjct: 132 SLVNDGPVTIILDS 145

Length = 145

>gnl|CDD|202294 pfam02580, Tyr_Deacylase, D-Tyr-tRNA(Tyr) deacylase

 Score =  167 bits (425), Expect = 8e-54
 Identities = 67/136 (49%), Positives = 90/136 (66%), Gaps = 4/136 (2%)

Query: 29  CLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKY 88
             VD  V+ SIG GL +L+G+++ DTE+D+ Y+V KIL L+IFE+EEGK    S+ D   
Sbjct: 12  VSVDGEVVGSIGRGLLVLVGVTKDDTEEDLRYLVEKILNLRIFEDEEGK-MNLSLKDVGG 70

Query: 89  EILCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHM 147
           EIL +SQFTLY    KG   +FH A    ++E  Y KF++ L+ A    KV+ G FGA M
Sbjct: 71  EILIVSQFTLYGDTKKGRRPSFHAAAKPDEAEELYEKFVQLLREAG--IKVETGTFGADM 128

Query: 148 SVNIVNDGPVTIPLES 163
            V++VNDGPVTI L+S
Sbjct: 129 QVSLVNDGPVTILLDS 144

This family comprises of several D-Tyr-tRNA(Tyr) deacylase proteins. Cell growth inhibition by several d-amino acids can be explained by an in vivo production of d-aminoacyl-tRNA molecules. Escherichia coli and yeast cells express an enzyme, d-Tyr-tRNA(Tyr) deacylase, capable of recycling such d-aminoacyl-tRNA molecules into free tRNA and d-amino acid. Accordingly, upon inactivation of the genes of the above deacylases, the toxicity of d-amino acids increases. Orthologues of the deacylase are found in many cells. Length = 144

>gnl|CDD|235383 PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional

 Score =  156 bits (396), Expect = 2e-49
 Identities = 63/136 (46%), Positives = 84/136 (61%), Gaps = 6/136 (4%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD  V+  IG GL +L+G+ + DTE+D DY+  KIL L+IFE+EEGK    SV D   EI
Sbjct: 15  VDGEVVGEIGKGLLVLVGVEKGDTEEDADYLAEKILNLRIFEDEEGK-MNLSVQDVGGEI 73

Query: 91  LCISQFTLYHG--LKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMS 148
           L +SQFTLY     KG   +F  A    ++E  Y+ F+E L+       V+ G+FGA M 
Sbjct: 74  LVVSQFTLY-ADTRKGRRPSFSAAAPPEEAEPLYDYFVEALRAQG--VPVETGRFGADMQ 130

Query: 149 VNIVNDGPVTIPLESP 164
           V++VNDGPVT  L+S 
Sbjct: 131 VSLVNDGPVTFLLDSK 146

Length = 147

>gnl|CDD|224407 COG1490, Dtd, D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis]

 Score =  155 bits (394), Expect = 3e-49
 Identities = 65/134 (48%), Positives = 85/134 (63%), Gaps = 4/134 (2%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD  V+ +IG GL +L+G++  DTE+D DY+  KIL L+IFE+EEGK    SV D   EI
Sbjct: 15  VDGEVVGAIGQGLLVLVGVTHDDTEEDADYLAEKILNLRIFEDEEGK-MNLSVQDVGGEI 73

Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTLY    KG   +F  A     +E  Y  F+E L+      KV+ G+FGA M V
Sbjct: 74  LVVSQFTLYADTKKGRRPSFSKAAKPDQAEELYEYFVELLRELGI--KVETGRFGADMQV 131

Query: 150 NIVNDGPVTIPLES 163
           ++VNDGPVTI L+S
Sbjct: 132 SLVNDGPVTILLDS 145

Length = 145

>gnl|CDD|129358 TIGR00256, TIGR00256, D-tyrosyl-tRNA(Tyr) deacylase

 Score =  116 bits (291), Expect = 1e-33
 Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 4/134 (2%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V+  VI  IG GL +L+G+ + D E+  D +  K+L  +IF + EGK    +V     EI
Sbjct: 15  VEGEVIGEIGAGLLVLLGVEKDDDEQKADKLAEKVLNYRIFSDSEGK-MNLNVQQAGGEI 73

Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTL     KG   +F        +E  Y  F+E  +      KV+ G+F A M V
Sbjct: 74  LSVSQFTLAADTKKGMRPSFSKGASPDRAEELYEYFVELCREKGM--KVQTGRFAADMQV 131

Query: 150 NIVNDGPVTIPLES 163
           ++ NDGPVT  L+ 
Sbjct: 132 SLTNDGPVTFWLDV 145

This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA. The name reflects characterization with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader [Protein synthesis, tRNA aminoacylation]. Length = 145

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
PTZ00120	154	D-tyrosyl-tRNA(Tyr) deacylase; Provisional	100.0
PRK05273	147	D-tyrosyl-tRNA(Tyr) deacylase; Provisional	100.0
TIGR00256	145	D-tyrosyl-tRNA(Tyr) deacylase. This homodimeric en	100.0
COG1490	145	Dtd D-Tyr-tRNAtyr deacylase [Translation, ribosoma	100.0
cd00563	145	Dtyr_deacylase D-Tyrosyl-tRNAtyr deacylases; a cla	100.0
PF02580	145	Tyr_Deacylase: D-Tyr-tRNA(Tyr) deacylase; InterPro	100.0
KOG3323|consensus	149		100.0

>PTZ00120 D-tyrosyl-tRNA(Tyr) deacylase; Provisional

Probab=100.00  E-value=1.4e-69  Score=436.93  Aligned_cols=150  Identities=47%  Similarity=0.769  Sum_probs=142.6

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      || +||||++|+|+|||+.+++|++|||+||||+++||+++++|||+||++||||+|++||+||+||+|++|||||||||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~GllvlvGi~~~Dt~~~~~~l~~Kil~lRiF~de~gk~~n~Sv~d~~geiL~VSQF   80 (154)
T PTZ00120          1 MRVVIQRVLSASVTVEGEVVGSIGKGLVLLVGIHEEDTWEDADYIIRKCLKLRLWPDEGGKMWDRSVKDKDYEVLVVSQF   80 (154)
T ss_pred             CEEEEEEeCeEEEEECCEEEEEECCceEEEEEEcCCCCHHHHHHHHHHHhheecccCCCCCcccCCHhhcCCCEEEEEcc
Confidence            45 88999999999999999999999999999999999999999999999999999999998999999999999999999


Q ss_pred             cccccCcCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeCCCCC
Q psy11634         97 TLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLESPSEK  167 (178)
Q Consensus        97 TL~g~~KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds~~~~  167 (178)
                      |||...||||||||.||+|++|++||++|+++|++++...+|++|+|||||+|+|+|||||||+|||++..
T Consensus        81 TL~~~~KG~RPsF~~aa~~~~A~~Ly~~f~~~l~~~~~~~~V~~G~FGa~M~V~l~NdGPvTi~lds~~~~  151 (154)
T PTZ00120         81 TLFNVKKGNKPDFHLAMSPEDALPLYNKFVEKFKKEYAPEKIKTGKFGQYMNVSLVNDGPVTIILDSKEKN  151 (154)
T ss_pred             ccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCccEECcCCCCcEEEEEECCCEEEEEEcCccc
Confidence            99933499999999999999999999999999998875468999999999999999999999999998644

>PRK05273 D-tyrosyl-tRNA(Tyr) deacylase; Provisional

Probab=100.00  E-value=1.5e-69  Score=433.99  Aligned_cols=145  Identities=43%  Similarity=0.699  Sum_probs=140.2

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      || +||||++|+|+|||+++++||+|||+||||+++||+++++|||+||++||||+|++|| ||+||+|++||||+||||
T Consensus         1 Mr~viQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~~~~~~~~Kil~lRif~d~~gk-~~~Sv~d~~geiL~VsQF   79 (147)
T PRK05273          1 MRAVIQRVSEASVTVDGEVVGEIGKGLLVLVGVEKGDTEEDADYLAEKILNLRIFEDEEGK-MNLSVQDVGGEILVVSQF   79 (147)
T ss_pred             CEEEEEEeceEEEEECCEEEEEECCceEEEEEEcCCCCHHHHHHHHHHHhheEcccCCCCC-cccCHHHCCCCEEEEEcc
Confidence            45 8899999999999999999999999999999999999999999999999999999997 999999999999999999


Q ss_pred             cccccC-cCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeCCC
Q psy11634         97 TLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLESPS  165 (178)
Q Consensus        97 TL~g~~-KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds~~  165 (178)
                      ||||++ ||||||||.||+|+.|++||++|+++||+.+  .+|++|+|||||+|+|+|||||||+|||++
T Consensus        80 TL~a~~~KG~rP~F~~a~~~~~A~~ly~~f~~~l~~~~--~~V~~G~FGa~M~V~l~NDGPvTi~ld~~~  147 (147)
T PRK05273         80 TLYADTRKGRRPSFSAAAPPEEAEPLYDYFVEALRAQG--VPVETGRFGADMQVSLVNDGPVTFLLDSKK  147 (147)
T ss_pred             cccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHHcC--CceeecccCCCcEEEEEECCCEEEEEecCC
Confidence            999997 9999999999999999999999999999875  589999999999999999999999999964

>TIGR00256 D-tyrosyl-tRNA(Tyr) deacylase

Probab=100.00  E-value=2.7e-69  Score=431.75  Aligned_cols=143  Identities=34%  Similarity=0.546  Sum_probs=138.4

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      || +||||++|+|+|||+++++|++|||+||||+++||+++++|||+||++||||+|++|| ||+||+|++||||+||||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~GllvlvGi~~~Dt~~~~~~~~~Kil~lRif~de~gk-~~~Sv~d~~geiL~VSQF   79 (145)
T TIGR00256         1 MIALIQRVSQASVTVEGEVIGEIGAGLLVLLGVEKDDDEQKADKLAEKVLNYRIFSDSEGK-MNLNVQQAGGEILSVSQF   79 (145)
T ss_pred             CEEEEEEeCeEEEEECCEEEEEECCcEEEEEEecCCCCHHHHHHHHHHHhheEeccCCCCC-ccCCHHHCCCCEEEEECC
Confidence            45 8899999999999999999999999999999999999999999999999999999886 999999999999999999


Q ss_pred             cccccC-cCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeC
Q psy11634         97 TLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLES  163 (178)
Q Consensus        97 TL~g~~-KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds  163 (178)
                      ||||++ ||||||||.||+|++|++||++|+++|++.+  .+|++|+|||||+|+|+|||||||+|||
T Consensus        80 TL~a~~~KG~rPsF~~a~~~~~A~~ly~~fv~~l~~~~--~~V~~G~FGa~M~V~l~NdGPvTi~ld~  145 (145)
T TIGR00256        80 TLAADTKKGMRPSFSKGASPDRAEELYEYFVELCREKG--MKVQTGRFAADMQVSLTNDGPVTFWLDV  145 (145)
T ss_pred             cccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC--CCceECccCCCcEEEEEECCCEEEEEeC
Confidence            999998 9999999999999999999999999999864  6899999999999999999999999996

This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA. The name reflects characterization with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader.

>COG1490 Dtd D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=7.3e-69  Score=425.95  Aligned_cols=143  Identities=46%  Similarity=0.719  Sum_probs=138.5

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      |+ +||||++|+|+|||+++++|++|||+||||+++||+++++||++||++||||+|++|| ||+||+|++|+||+||||
T Consensus         1 MkaviQRV~~AsV~Vdgeivg~I~~GllvLvGV~~~Dt~~~a~~l~~Ki~~lRiF~D~~gK-mN~sv~di~G~iL~VSQF   79 (145)
T COG1490           1 MKAVIQRVSSASVSVDGEVVGAIGQGLLVLVGVTHDDTEEDADYLAEKILNLRIFEDEEGK-MNLSVQDVGGEILVVSQF   79 (145)
T ss_pred             CeeeeeeeeeeEEEECCEEeeecCCcEEEEEeecCCCCHHHHHHHHHHHhceEeecCcccc-cccCHHHcCCcEEEEEEE
Confidence            45 7899999999999999999999999999999999999999999999999999999887 899999999999999999


Q ss_pred             cccccC-cCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeC
Q psy11634         97 TLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLES  163 (178)
Q Consensus        97 TL~g~~-KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds  163 (178)
                      ||||++ |||||||+.|++|++|++||++|++.||+.+  .+|++|+|||||+|+|+|||||||+|||
T Consensus        80 TL~adt~kG~RPsFs~aa~p~~A~~lYe~f~~~lr~~~--~~V~tG~FgA~M~V~LvNdGPVTi~lds  145 (145)
T COG1490          80 TLYADTKKGRRPSFSKAAKPDQAEELYEYFVELLRELG--IKVETGRFGADMQVSLVNDGPVTILLDS  145 (145)
T ss_pred             EEeecccCCCCCCccccCChHHHHHHHHHHHHHHHhcC--CcceeeeeeceeEEEEecCCCeEEEEeC
Confidence            999986 9999999999999999999999999999875  6899999999999999999999999996

>cd00563 Dtyr_deacylase D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but not in archea; beta barrel-like fold structure; forms homodimers in which two surface cavities serve as the active site for tRNA binding

Probab=100.00  E-value=1.7e-68  Score=427.14  Aligned_cols=143  Identities=45%  Similarity=0.703  Sum_probs=138.6

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      || +||||++|+|+|+|+++++||+|||+||||+++||+++++|||+|||+||||+|++|| ||+||+|++||||+||||
T Consensus         1 Mr~viQRV~~A~V~V~~~~v~~Ig~GllvlvGi~~~Dt~~~~~~~~~Kll~lRif~d~~gk-~~~Sv~d~~gevL~VsQF   79 (145)
T cd00563           1 MRAVIQRVSEASVTVDGEVVGAIGQGLLVLVGVTHDDTEEDAEYLARKILNLRIFEDEEGK-MNLSVKDVNGEILVVSQF   79 (145)
T ss_pred             CEEEEEEeceEEEEECCEEEEEECCcEEEEEEecCCCCHHHHHHHHHHHhheEcccCCCCC-cccChhhcCCCEEEEEcc
Confidence            45 8899999999999999999999999999999999999999999999999999999887 889999999999999999


Q ss_pred             cccccC-cCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeC
Q psy11634         97 TLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLES  163 (178)
Q Consensus        97 TL~g~~-KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds  163 (178)
                      ||||++ ||||||||.||+|++|++||++|+++|++.+  .+|++|+|||||+|+|+|||||||+|||
T Consensus        80 TL~~~~~KG~rP~F~~a~~~e~A~~ly~~fv~~l~~~~--~~V~~G~FGa~M~V~l~NDGPvTi~ld~  145 (145)
T cd00563          80 TLYADTKKGRRPSFSAAAPPDKAEPLYESFVELLREKG--IKVETGVFGAMMQVSLVNDGPVTIILDS  145 (145)
T ss_pred             ccccccCCCCCCCccccCCHHHHHHHHHHHHHHHHHcC--CcceeCccCCCcEEEEEECCCEEEEEeC
Confidence            999998 9999999999999999999999999999876  5899999999999999999999999996

>PF02580 Tyr_Deacylase: D-Tyr-tRNA(Tyr) deacylase; InterPro: IPR003732 This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA

Probab=100.00  E-value=1.9e-67  Score=420.82  Aligned_cols=143  Identities=50%  Similarity=0.804  Sum_probs=130.5

Q ss_pred             eeEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecccc
Q psy11634         19 KQLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQFTL   98 (178)
Q Consensus        19 ~~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQFTL   98 (178)
                      .+||||++|+|+|||+++++||+|||+||||+++||+++++|||+||++||||+|++|| ||+||+|++||||+||||||
T Consensus         2 ~ViQRV~~A~V~V~~~~~~~Ig~Glvvlvgi~~~Dt~~~~~~~~~Kil~lRif~d~~gk-~~~Sv~d~~geiL~VsQFTL   80 (145)
T PF02580_consen    2 AVIQRVSSASVTVDGEVVSSIGRGLVVLVGIGKGDTEEDVDKMARKILNLRIFEDENGK-WNLSVKDVGGEILLVSQFTL   80 (145)
T ss_dssp             EEEEEEEEEEEEETTEEEEEESSEEEEEEEEBTT--HHHHHHHHHHHHHSEEEEETTSS-EEEETTTTT-EEEEEE-GGG
T ss_pred             EEEEEeCeEEEEECCEEEEEECCCcEEEEEEECCCCHHHHHHHHHhhceEEECcCcCCc-cceeHhhcccceEEEEeeee
Confidence            58999999999999999999999999999999999999999999999999999999887 99999999999999999999


Q ss_pred             cccC-cCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeC
Q psy11634         99 YHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLES  163 (178)
Q Consensus        99 ~g~~-KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds  163 (178)
                      ||++ ||||||||+||+|++|++||++|+++||+.|. .+|++|+|||+|+|+|+|||||||+|||
T Consensus        81 ~g~~~kG~rp~f~~a~~~~~a~~ly~~f~~~l~~~~~-~~V~~G~FGa~M~V~l~NdGPvTi~lds  145 (145)
T PF02580_consen   81 YGDTKKGNRPSFHNAAPPEEAEELYERFVEKLREEYK-PKVKTGVFGADMQVSLVNDGPVTIILDS  145 (145)
T ss_dssp             GSBCSSSSSEBGTTB--HHHHHHHHHHHHHHHHHHST-SCEEE--TTS-EEEEEEEEEEEEEEEEC
T ss_pred             eeeccCCCCccccccCCHHHHHHHHHHHHHHHHHhCC-CceeECccCCeeEEEEEeCCCEEEEEeC
Confidence            9998 99999999999999999999999999999985 5999999999999999999999999997

The name reflects characterisation with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader. ; GO: 0016788 hydrolase activity, acting on ester bonds, 0019478 D-amino acid catabolic process, 0005737 cytoplasm; PDB: 3LMU_F 3LMT_B 3KNF_B 3KOC_C 3KNP_D 3KO9_F 3KO3_B 3KO5_C 3KOB_D 3LMV_E ....

>KOG3323|consensus

Probab=100.00  E-value=7.7e-67  Score=414.38  Aligned_cols=148  Identities=55%  Similarity=0.895  Sum_probs=144.9

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      || +||||++|+|+|+++.|++||+|||+||||+++||+++++||++||||||+||||+|+.|.+||.|.+|||||||||
T Consensus         1 mkavlQrv~~AsvtV~~~~vs~I~~Gl~vlvgi~~~dt~ed~~kmvrkiLnlrlfe~es~k~w~ksv~dl~~eiL~VsQf   80 (149)
T KOG3323|consen    1 MKAVLQRVLRASVTVDDEQVSEIGRGLCVLVGISKDDTEEDLEKMVRKILNLRLFEDESGKGWKKSVMDLNGEILCVSQF   80 (149)
T ss_pred             ChHHHHHhhhheEEEcceeeeeecCceEEEEEEccCCCHHHHHHHHHHHhheeeccccccCcccchhhhCCCCEEEEEee
Confidence            44 78999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeCCC
Q psy11634         97 TLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLESPS  165 (178)
Q Consensus        97 TL~g~~KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds~~  165 (178)
                      ||||++|||+||||.||++++|.+||++|++.|++.|++++|++|+|||||+|+++|||||||++||++
T Consensus        81 TL~~rlKG~kpdfH~am~~~ea~elY~qfl~~l~k~~~~~~ikdG~fGamm~v~l~n~GPvTi~~es~~  149 (149)
T KOG3323|consen   81 TLYGRLKGNKPDFHLAMKGEEAKELYNQFLELLRKAYGADKIKDGKFGAMMQVHLVNDGPVTILLESPE  149 (149)
T ss_pred             eeeeeecCCCcchhhhcCchhhHHHHHHHHHHHHHHhCchhhhccccceEEEEEEecCCCeEEEecCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	178
2okv_A	209	C-Myc Dna Unwinding Element Binding Protein Length		7e-42
3knf_A	164	Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From		1e-23
2dbo_A	148	Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From		2e-22
1jke_A	145	D-Tyr Trnatyr Deacylase From Escherichia Coli Lengt		7e-14
1j7g_A	144	Structure Of Yihz From Haemophilus Influenzae (Hi06		2e-12

>pdb|2OKV|A Chain A, C-Myc Dna Unwinding Element Binding Protein Length = 209

Iteration: 1
 Score =  166 bits (420), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 103/143 (72%)
Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V    IS+IG G+C+L+GIS  DT+K+++++V KIL L++FE+E GK W+ SV DK+YEI
Sbjct: 15  VGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEI 74
Query: 91  LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
           LC+SQFTL   LKGN   FH AM    +E FYN FLE+L+  Y    +KDGKFGA+M V+
Sbjct: 75  LCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVH 134
Query: 151 IVNDGPVTIPLESPSEKSNTPVP 173
           I NDGPVTI LESP+  + T  P
Sbjct: 135 IQNDGPVTIELESPAPGTATSDP 157

>pdb|3KNF|A Chain A, Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From Plasmodium Falciparum Length = 164

Iteration: 1
 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 35  VISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCIS 94
           +IS I  GL   +GI ++DT +D  YI+ K L L+++ N+  K W  +V D  YE+L +S
Sbjct: 29  IISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNND-NKTWDKNVKDLNYELLIVS 87
Query: 95  QFTLY-HGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVN 153
           QFTL+ +  KGN   FH A    ++ +FYNK +++ K  Y+  K+K GKFG +M++++ N
Sbjct: 88  QFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTN 147
Query: 154 DGPVTIPLES 163
           DGPVTI +++
Sbjct: 148 DGPVTIYIDT 157

>pdb|2DBO|A Chain A, Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From Aquifex Aeolicus Length = 148

Iteration: 1
 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 4/134 (2%)
Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD  V+ SI  GL + +G+ + DTE+D++ +VNKIL L+IFE+E GK +  SV D K EI
Sbjct: 15  VDGKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDERGK-FQYSVLDIKGEI 73
Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTLY  + KG   +F  A     ++  Y KF++K+K +    KV+ G FGA M V
Sbjct: 74  LVVSQFTLYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKESG--LKVETGIFGAMMDV 131
Query: 150 NIVNDGPVTIPLES 163
            I N GPVTI ++S
Sbjct: 132 FIENWGPVTIIIDS 145

>pdb|1JKE|A Chain A, D-Tyr Trnatyr Deacylase From Escherichia Coli Length = 145

Iteration: 1
 Score = 73.2 bits (178), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V+  V   IG GL +L+G+ + D E+  + +  ++L  +IF + EGK    +V      +
Sbjct: 15  VEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGK-MNLNVQQAGGSV 73
Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTL     +G   +F        +E  Y+ F+E+ +        + G+F A M V
Sbjct: 74  LVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQE--MNTQTGRFAADMQV 131
Query: 150 NIVNDGPVTIPLE 162
           ++VNDGPVT  L+
Sbjct: 132 SLVNDGPVTFWLQ 144

>pdb|1J7G|A Chain A, Structure Of Yihz From Haemophilus Influenzae (Hi0670), A D-Tyr- Trna(Tyr) Deacylase Length = 144

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V    I  IG GL +L+G+ + D  +  D +  K+L  +IF +E  K    +V   + E+
Sbjct: 15  VKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDENDK-MNLNVQQAQGEL 73
Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTL     KG   +F      A +   Y  F++K      +S    G+F A M V
Sbjct: 74  LIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKLPVST---GQFAADMQV 130
Query: 150 NIVNDGPVT 158
           ++ NDGPVT
Sbjct: 131 SLTNDGPVT 139

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	178
2okv_A	209	Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA repl	1e-70
3ko5_A	164	D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase	3e-64
2dbo_A	148	D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyr	9e-64
1j7g_A	144	D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) dea	1e-59
1jke_A	145	O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alph	6e-59
1tc5_A	194	Probable eukaryotic D-amino acid tRNA deacylase, L	4e-45

>2okv_A Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA replication, DUE, ATPase, tRNA deacylase, hydrolase; 2.00A {Homo sapiens} Length = 209

 Score =  211 bits (540), Expect = 1e-70
 Identities = 79/143 (55%), Positives = 103/143 (72%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V    IS+IG G+C+L+GIS  DT+K+++++V KIL L++FE+E GK W+ SV DK+YEI
Sbjct: 15  VGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEI 74

Query: 91  LCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVN 150
           LC+SQFTL   LKGN   FH AM    +E FYN FLE+L+  Y    +KDGKFGA+M V+
Sbjct: 75  LCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVH 134

Query: 151 IVNDGPVTIPLESPSEKSNTPVP 173
           I NDGPVTI LESP+  + T  P
Sbjct: 135 IQNDGPVTIELESPAPGTATSDP 157

>3ko5_A D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase; HET: ADP; 2.09A {Plasmodium falciparum} PDB: 3knp_A 3knf_A* 3ko3_A* 3ko4_A* 3ko7_A* 3ko9_A* 3kob_A* 3koc_A* 3kod_A 3lmt_A 3lmu_A 3lmv_A* Length = 164

 Score =  193 bits (494), Expect = 3e-64
 Identities = 54/142 (38%), Positives = 86/142 (60%), Gaps = 2/142 (1%)

Query: 23  KHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASS 82
           K        +  +IS I  GL   +GI ++DT +D  YI+ K L L+++ N+    W  +
Sbjct: 17  KENIGENEKELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKT-WDKN 75

Query: 83  VSDKKYEILCISQFTLY-HGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDG 141
           V D  YE+L +SQFTL+ +  KGN   FH A    ++ +FYNK +++ K  Y+  K+K G
Sbjct: 76  VKDLNYELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIG 135

Query: 142 KFGAHMSVNIVNDGPVTIPLES 163
           KFG +M++++ NDGPVTI +++
Sbjct: 136 KFGNYMNIDVTNDGPVTIYIDT 157

>2dbo_A D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyrosine, structural genomi NPPSFA, national project on protein structural and function analyses; 2.76A {Aquifex aeolicus} Length = 148

 Score =  192 bits (490), Expect = 9e-64
 Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 4/134 (2%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           VD  V+ SI  GL + +G+ + DTE+D++ +VNKIL L+IFE+E GK +  SV D K EI
Sbjct: 15  VDGKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDERGK-FQYSVLDIKGEI 73

Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTLY  + KG   +F  A     ++  Y KF++K+K +    KV+ G FGA M V
Sbjct: 74  LVVSQFTLYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKESGL--KVETGIFGAMMDV 131

Query: 150 NIVNDGPVTIPLES 163
            I N GPVTI ++S
Sbjct: 132 FIENWGPVTIIIDS 145

>1j7g_A D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) deacylase, structural genomics, hypothetical structure 2 function project, S2F; 1.64A {Haemophilus influenzae rd KW20} SCOP: c.110.1.1 Length = 144

 Score =  181 bits (462), Expect = 1e-59
 Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V    I  IG GL +L+G+ + D  +  D +  K+L  +IF +E  K    +V   + E+
Sbjct: 15  VKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDENDK-MNLNVQQAQGEL 73

Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTL     KG   +F      A +   Y  F++K         V  G+F A M V
Sbjct: 74  LIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKL---PVSTGQFAADMQV 130

Query: 150 NIVNDGPVTIPLE 162
           ++ NDGPVT  L 
Sbjct: 131 SLTNDGPVTFWLN 143

>1jke_A O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alpha-barrel, hydrolase; 1.55A {Escherichia coli} SCOP: c.110.1.1 Length = 145

 Score =  179 bits (458), Expect = 6e-59
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V+  V   IG GL +L+G+ + D E+  + +  ++L  +IF + EGK    +V      +
Sbjct: 15  VEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGK-MNLNVQQAGGSV 73

Query: 91  LCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTL     +G   +F        +E  Y+ F+E+ +        + G+F A M V
Sbjct: 74  LVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQE--MNTQTGRFAADMQV 131

Query: 150 NIVNDGPVTIPLE 162
           ++VNDGPVT  L+
Sbjct: 132 SLVNDGPVTFWLQ 144

>1tc5_A Probable eukaryotic D-amino acid tRNA deacylase, LMAJ005534AAA; SGPP, structural genomics, PSI; 1.93A {Leishmania major} SCOP: c.110.1.1 Length = 194

 Score =  146 bits (369), Expect = 4e-45
 Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 36/171 (21%)

Query: 28  VCLVDSNVISSIGMGLCILIGI-----SRHDTEKDMDYIVNKILKLKIFENEEGKRW--- 79
           + + + +     G G+ + I       S   T++ + + V  +L  KIF +   ++    
Sbjct: 23  LLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTKIFTHFSPEKMINQ 82

Query: 80  -ASSVSDKKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKV 138
             S     + +IL + Q +L   +KG  + FH  +        Y++F   ++ A  + + 
Sbjct: 83  PQSLEECPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRFCHFVRVARGVDES 142

Query: 139 K---------------------------DGKFGAHMSVNIVNDGPVTIPLE 162
           +                            G FG    +   ++GP T   +
Sbjct: 143 RVDANGAPRSEGDAPKAEGWIKYNSRVISGTFGNRQGLRFESEGPFTHMFD 193

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	178
2dbo_A	148	D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyr	100.0
1jke_A	145	O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alph	100.0
1j7g_A	144	D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) dea	100.0
2okv_A	209	Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA repl	100.0
3ko5_A	164	D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase	100.0
1tc5_A	194	Probable eukaryotic D-amino acid tRNA deacylase, L	100.0

>2dbo_A D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyrosine, structural genomi NPPSFA, national project on protein structural and function analyses; 2.76A {Aquifex aeolicus}

Probab=100.00  E-value=1.2e-70  Score=439.50  Aligned_cols=145  Identities=43%  Similarity=0.638  Sum_probs=139.7

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      || +||||++|+|+|||+++++|++|||+||||+++||+++++|||+||++||||+|++|| ||+||+|++||||+||||
T Consensus         1 MraviQRV~~AsV~Vdg~~vg~I~~GllvlvGv~~~Dt~~~~~~l~~Kil~lRif~De~gk-mn~Sv~d~~g~iL~VSQF   79 (148)
T 2dbo_A            1 MRAVIQRVKKSWVEVDGKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDERGK-FQYSVLDIKGEILVVSQF   79 (148)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCBCCSSCS-SCBCTTTTTCEEEEEECG
T ss_pred             CEEEEEEECeEEEEECCEEEEEeCCeEEEEEEEeCCCCHHHHHHHHHHHhcEEeccCCCCC-cccCHHHcCCCEEEEEee
Confidence            45 8899999999999999999999999999999999999999999999999999999998 999999999999999999


Q ss_pred             cccccC-cCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeCCC
Q psy11634         97 TLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLESPS  165 (178)
Q Consensus        97 TL~g~~-KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds~~  165 (178)
                      ||||++ ||||||||.||+|++|++||++|+++|++.+  .+|++|+|||||+|+|+|||||||+|||++
T Consensus        80 TL~ad~~KG~RPsF~~Aa~p~~A~~LY~~f~~~l~~~g--~~V~tG~FGA~M~V~l~NDGPVTi~lds~~  147 (148)
T 2dbo_A           80 TLYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKESG--LKVETGIFGAMMDVFIENWGPVTIIIDSRE  147 (148)
T ss_dssp             GGGCBCSSSSSCBCTTBCCHHHHHHHHHHHHHHHHTTC--SCEEECCSSSCCEEEEEEEEEEEEEEEGGG
T ss_pred             ecccccCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC--CcceECccCCCcEEEEEECCCEEEEEECCC
Confidence            999987 9999999999999999999999999999863  589999999999999999999999999864

>1jke_A O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alpha-barrel, hydrolase; 1.55A {Escherichia coli} SCOP: c.110.1.1

Probab=100.00  E-value=1.4e-70  Score=437.84  Aligned_cols=143  Identities=30%  Similarity=0.528  Sum_probs=138.6

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      || +||||++|+|+|||+++++|++|||+||||+++||+++++|||+||++||||+|++|| ||+||+|++||||+||||
T Consensus         1 MraviQRV~~AsV~Vdg~~vg~I~~GllvlvGv~~~Dt~~~~~~l~~Ki~~lRif~de~gk-mn~Sv~d~~g~iL~VSQF   79 (145)
T 1jke_A            1 MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGK-MNLNVQQAGGSVLVVSQF   79 (145)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTTSC-EEECTTTTTCEEEEEECG
T ss_pred             CEEEEEEECeEEEEECCEEEEEeCCeEEEEEEEeCCCCHHHHHHHHHHHhhEEeccCCCCC-ccCCHHHcCCCEEEEEcc
Confidence            45 8899999999999999999999999999999999999999999999999999999998 999999999999999999


Q ss_pred             cccccC-cCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeC
Q psy11634         97 TLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLES  163 (178)
Q Consensus        97 TL~g~~-KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds  163 (178)
                      ||||++ ||||||||.||+|++|++||++|+++|++.+  .+|++|+|||||+|+|+|||||||+|||
T Consensus        80 TL~ad~~KG~RPsF~~Aa~p~~A~~LY~~f~~~l~~~~--~~V~tG~FGA~M~V~l~NDGPVTi~lds  145 (145)
T 1jke_A           80 TLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQE--MNTQTGRFAADMQVSLVNDGPVTFWLQV  145 (145)
T ss_dssp             GGGSBCSSSSSCBCSSBCCHHHHHHHHHHHHHHHHHTT--CCEEECCTTSCEEEEEEEEEEEEEEEEC
T ss_pred             ccccccCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC--CcceeCccCCCcEEEEEeCCCEEEEEeC
Confidence            999997 9999999999999999999999999999875  5799999999999999999999999996

>1j7g_A D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) deacylase, structural genomics, hypothetical structure 2 function project, S2F; 1.64A {Haemophilus influenzae rd KW20} SCOP: c.110.1.1

Probab=100.00  E-value=2.1e-70  Score=436.40  Aligned_cols=142  Identities=31%  Similarity=0.488  Sum_probs=137.9

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      || +||||++|+|+|||+++++|++|||+||||+++||+++++|||+||++||||+|++|| ||+||+|++||||+||||
T Consensus         1 MraviQRV~~AsV~Vdg~~vg~I~~GllvlvGv~~~Dt~~~~~~l~~Kil~lRif~de~gk-mn~Sv~d~~g~iL~VSQF   79 (144)
T 1j7g_A            1 MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDENDK-MNLNVQQAQGELLIVSQF   79 (144)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTTSC-EEECTTTTTCEEEEEECG
T ss_pred             CEEEEEEECeEEEEECCEEEEEECCeEEEEEEEeCCCCHHHHHHHHHHHhhEEeccCcCCC-ccCCHHHcCCCEEEEEcc
Confidence            45 8899999999999999999999999999999999999999999999999999999998 999999999999999999


Q ss_pred             cccccC-cCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeC
Q psy11634         97 TLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLES  163 (178)
Q Consensus        97 TL~g~~-KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds  163 (178)
                      ||||++ ||||||||.||+|++|++||++|+++|++.   .+|++|+|||||+|+|+|||||||+|||
T Consensus        80 TL~ad~~KG~RPsF~~Aa~p~~A~~LY~~f~~~l~~~---~~V~tG~FGA~M~V~l~NDGPVTi~lds  144 (144)
T 1j7g_A           80 TLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEK---LPVSTGQFAADMQVSLTNDGPVTFWLNV  144 (144)
T ss_dssp             GGGCBCSSTTSCBCTTBCCHHHHHHHHHHHHHHHHTT---SCEEECCTTSCCEEEEEEEEEEEEEEEC
T ss_pred             ccccccCCCCCCCccccCCHHHHHHHHHHHHHHHhcC---CCeeeCccCCCeEEEEEECCCEEEEEeC
Confidence            999997 999999999999999999999999999975   6899999999999999999999999996

>2okv_A Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA replication, DUE, ATPase, tRNA deacylase, hydrolase; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.2e-70  Score=455.42  Aligned_cols=151  Identities=52%  Similarity=0.849  Sum_probs=143.7

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      || +||||++|+|+|||+++++|++|||+||||+++||+++++|||+||++||||+|++||+||+||+|++|+|||||||
T Consensus         1 MRaViQRV~~AsV~Vdg~vvg~Ig~GllvLvGv~~~Dt~~d~~~la~Kil~LRIF~De~GK~mn~Sv~Dv~GeiLvVSQF   80 (209)
T 2okv_A            1 MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEILCVSQF   80 (209)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCBCCTTCCTTCBCHHHHTCEEEEEECG
T ss_pred             CEEEEEEeCeEEEEECCEEEEEeCCeEEEEEEEeCCCCHHHHHHHHHHHhhEEeccCCCCCcccCCHHHcCCCEEEEEee
Confidence            45 88999999999999999999999999999999999999999999999999999999988999999999999999999


Q ss_pred             cccccCcCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeCCCCCC
Q psy11634         97 TLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLESPSEKS  168 (178)
Q Consensus        97 TL~g~~KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds~~~~~  168 (178)
                      ||||++||||||||.||+|++|++||++|+++||+.+.+.+|++|+|||||+|+|+|||||||+|||++...
T Consensus        81 TL~ad~KG~RPsF~~Aa~pe~A~~LYe~Fv~~lr~~~~~~~V~tG~FGA~M~V~LvNDGPVTi~lds~~~~~  152 (209)
T 2okv_A           81 TLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGPVTIELESPAPGT  152 (209)
T ss_dssp             GGSCCCSSSSCCCTTBCCHHHHHHHHHHHHHHHHHHSCGGGEEECCTTSCEEEEEEEEEEEEEEEECCC---
T ss_pred             eccccCCCCCCCccccCCHHHHHHHHHHHHHHHHHhCCCCccEeCcccCCcEEEEEeCCCEEEEEECCCccc
Confidence            999999999999999999999999999999999988765689999999999999999999999999987444

>3ko5_A D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase; HET: ADP; 2.09A {Plasmodium falciparum} PDB: 3knp_A 3knf_A* 3ko3_A* 3ko4_A* 3ko7_A* 3ko9_A* 3kob_A* 3koc_A* 3kod_A 3lmt_A 3lmu_A 3lmv_A*

Probab=100.00  E-value=9.7e-70  Score=440.50  Aligned_cols=150  Identities=36%  Similarity=0.636  Sum_probs=140.2

Q ss_pred             ee-eEEEeceeEEEE----CC------EEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCcccccccccc
Q psy11634         18 FK-QLVKHTPFVCLV----DS------NVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDK   86 (178)
Q Consensus        18 m~-~lQRV~~AsV~V----d~------~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~   86 (178)
                      || +||||++|+|+|    ||      +++++||+|||+||||+++||+++++|||+||++||||+|++|| ||+||+|+
T Consensus         1 MraviQRV~~AsV~V~~~~dg~s~~~~~~vg~Ig~GllvlvGv~~~Dt~~~~~~l~~Kil~lRiF~de~gk-mn~Sv~d~   79 (164)
T 3ko5_A            1 MRVVIQRVKGAILSVRKENIGENEKELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKT-WDKNVKDL   79 (164)
T ss_dssp             CEEEEEEEEEEEEEEECC--------EEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEEETTEE-EEECTTTT
T ss_pred             CEEEEEEeCeEEEEEeecCCCCccccceEEEEeCCceEEEEEEcCCCCHHHHHHHHHHHhcEEeecCCCcc-cccCHHHc
Confidence            55 889999999999    99      89999999999999999999999999999999999999999665 99999999


Q ss_pred             CCeeeeeecccccccC-cCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEeCCC
Q psy11634         87 KYEILCISQFTLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLESPS  165 (178)
Q Consensus        87 ~geIL~VSQFTL~g~~-KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~lds~~  165 (178)
                      +|+|||||||||||++ ||||||||.||+|++|++||++|+++||+.|.+.+|++|+|||||+|+|+|||||||+|||++
T Consensus        80 ~G~iL~VSQFTL~ad~~KG~RPsF~~Aa~p~~A~~LY~~fv~~lr~~~~~~~V~tG~FGA~M~V~l~NDGPVTi~lds~~  159 (164)
T 3ko5_A           80 NYELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTNDGPVTIYIDTHD  159 (164)
T ss_dssp             TCEEEEEECGGGGCBCSSSSSCBCTTBCCHHHHHHHHHHHHHHHHHHSCTTSEEECCTTSCEEEEEEEEEEEEEEEEGGG
T ss_pred             CCCEEEEEccccccccCCCCCCcccccCCHHHHHHHHHHHHHHHHhhCCCCceEecccCCceEEEEEECCCEEEEEecCC
Confidence            9999999999999997 999999999999999999999999999988866899999999999999999999999999976


Q ss_pred             CCC
Q psy11634        166 EKS  168 (178)
Q Consensus       166 ~~~  168 (178)
                      ...
T Consensus       160 ~~~  162 (164)
T 3ko5_A          160 INL  162 (164)
T ss_dssp             C--
T ss_pred             ccc
Confidence            543

>1tc5_A Probable eukaryotic D-amino acid tRNA deacylase, LMAJ005534AAA; SGPP, structural genomics, PSI; 1.93A {Leishmania major} SCOP: c.110.1.1

Probab=100.00  E-value=2.3e-63  Score=411.13  Aligned_cols=149  Identities=22%  Similarity=0.304  Sum_probs=142.7

Q ss_pred             eeeeeeeEEEeceeEEEECCEE-EEEECCeEEEEEecccC-----CCHHHHHHHHHHHhceeecc--cCCCcccc--ccc
Q psy11634         14 YVKYFKQLVKHTPFVCLVDSNV-ISSIGMGLCILIGISRH-----DTEKDMDYIVNKILKLKIFE--NEEGKRWA--SSV   83 (178)
Q Consensus        14 ~~~~m~~lQRV~~AsV~Vd~~~-v~~Ig~GllvlvGi~~~-----Dt~~d~~~~a~Kil~LRiF~--d~~gk~~~--~Sv   83 (178)
                      .|.++.+||||++|+|+|||++ +++||+|||+||||.++     ||+++++|||+||++||||+  |++|| ||  +||
T Consensus         8 ~~~~r~viQRV~~AsV~Vdg~~~vg~Ig~Gllvlvgi~~~~~~~~Dt~~~~~~l~~Kil~lRIF~~~de~gk-mn~~~Sv   86 (194)
T 1tc5_A            8 HMTIRVMLQAMDQGHLLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTKIFTHFSPEKM-INQPQSL   86 (194)
T ss_dssp             CCEEEEEEEEESEEEEECSSSSCEEEECSEEEEEEEEECCTTCCCCCHHHHHHHHHHHHHSCCBSCSCTTCS-SCCCBCS
T ss_pred             ceeEEEEEEEECeeEEEECCeEEEEEECCeEEEEEEEecCCCCCCCCHHHHHHHHHHhhcEEeccccCcccC-cccCCCh
Confidence            4677889999999999999999 99999999999999999     99999999999999999999  88885 99  999


Q ss_pred             cccCC-eeeeeecccccccCcCCCCCCCCCCCChhHHHHHHHHHHHHHhcCC---------------------------C
Q psy11634         84 SDKKY-EILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYD---------------------------L  135 (178)
Q Consensus        84 ~D~~g-eIL~VSQFTL~g~~KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~---------------------------~  135 (178)
                      +|++| +|||||||||||++||||||||.||+|++|++||++|+++||+.|+                           +
T Consensus        87 ~D~~g~eiLvVSQFTL~g~~KGrrPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (194)
T 1tc5_A           87 EECPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRFCHFVRVARGVDESRVDANGAPRSEGDAPKAEGWIKYN  166 (194)
T ss_dssp             TTCTTCEEEEEECGGGGCEEETTEEECTTBCCHHHHHHHHHHHHHHHHHHTTCCTTSBCTTSSBSSGGGSCCSSSCCCCC
T ss_pred             hhcCCCeEEEEEccccccccCCCCCCcccCCCHHHHHHHHHHHHHHHHHhhCcccccccccccccccccccccccccccC
Confidence            99999 9999999999999999999999999999999999999999998753                           5


Q ss_pred             CceeeCccCceeEEEEEeCCceEEEEeC
Q psy11634        136 SKVKDGKFGAHMSVNIVNDGPVTIPLES  163 (178)
Q Consensus       136 ~~Vk~G~FGa~M~V~l~NDGPVTi~lds  163 (178)
                      .+|++|+|||+|+|+|+|||||||+||.
T Consensus       167 ~~V~tG~FGa~M~V~l~NDGPvTi~lD~  194 (194)
T 1tc5_A          167 SRVISGTFGNRQGLRFESEGPFTHMFDI  194 (194)
T ss_dssp             SCEEECCTTSCCCEEEEESCCCCEEEEC
T ss_pred             CceeECcccCCeEEEEEeCCCEEEEEeC
Confidence            7899999999999999999999999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	178
d1jkea_	145	c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Esche	6e-48
d1j7ga_	144	c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemo	8e-47
d1tc5a_	187	c.110.1.1 (A:) probable eukaryotic D-amino acid tR	4e-44

>d1jkea_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Escherichia coli [TaxId: 562]

 Score =  150 bits (381), Expect = 6e-48
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V+  V   IG GL +L+G+ + D E+  + +  ++L  +IF + EGK    +V      +
Sbjct: 15  VEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGKMNL-NVQQAGGSV 73

Query: 91  LCISQFTLY-HGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTL     +G   +F        +E  Y+ F+E+ +        + G+F A M V
Sbjct: 74  LVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEM--NTQTGRFAADMQV 131

Query: 150 NIVNDGPVTIPLE 162
           ++VNDGPVT  L+
Sbjct: 132 SLVNDGPVTFWLQ 144

>d1j7ga_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemophilus influenzae [TaxId: 727]} Length = 144

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Haemophilus influenzae [TaxId: 727]

 Score =  148 bits (374), Expect = 8e-47
 Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 31  VDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEI 90
           V    I  IG GL +L+G+ + D  +  D +  K+L  +IF +E  K    +V   + E+
Sbjct: 15  VKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDENDKMN-LNVQQAQGEL 73

Query: 91  LCISQFTLY-HGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSV 149
           L +SQFTL     KG   +F      A +   Y  F++K         V  G+F A M V
Sbjct: 74  LIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKL---PVSTGQFAADMQV 130

Query: 150 NIVNDGPVTIPLE 162
           ++ NDGPVT  L 
Sbjct: 131 SLTNDGPVTFWLN 143

>d1tc5a_ c.110.1.1 (A:) probable eukaryotic D-amino acid tRNA deacylase {Leishmania major [TaxId: 5664]} Length = 187

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: probable eukaryotic D-amino acid tRNA deacylase
species: Leishmania major [TaxId: 5664]

 Score =  142 bits (359), Expect = 4e-44
 Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 36/171 (21%)

Query: 28  VCLVDSNVISSIGMGLCILIGISRHD-----TEKDMDYIVNKILKLKIFENEEGK---RW 79
           + + + +     G G+ + I           T++ + + V  +L  KIF +   +     
Sbjct: 16  LLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTKIFTHFSPEKMINQ 75

Query: 80  ASSVSD-KKYEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDL--- 135
             S+ +  + +IL + Q +L   +KG  + FH  +        Y++F   ++ A  +   
Sbjct: 76  PQSLEECPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRFCHFVRVARGVDES 135

Query: 136 ------------------------SKVKDGKFGAHMSVNIVNDGPVTIPLE 162
                                   S+V  G FG    +   ++GP T   +
Sbjct: 136 RVDANGAPRSEGDAPKAEGWIKYNSRVISGTFGNRQGLRFESEGPFTHMFD 186

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	178
d1jkea_	145	D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [Ta	100.0
d1j7ga_	144	D-Tyr tRNAtyr deacylase, DTD {Haemophilus influenz	100.0
d1tc5a_	187	probable eukaryotic D-amino acid tRNA deacylase {L	100.0

>d1jkea_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.6e-69  Score=425.77  Aligned_cols=142  Identities=30%  Similarity=0.531  Sum_probs=137.2

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      |+ +||||++|+|+|||+++++|++|||+||||+++||+++++|||+||++||||+|++|| ||+||+|++|||||||||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~Gll~lvgi~~~D~~~~~~~~~~Kil~lRiF~d~~gk-~~~Sv~d~~geiLiVSQF   79 (145)
T d1jkea_           1 MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGK-MNLNVQQAGGSVLVVSQF   79 (145)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTTSC-EEECTTTTTCEEEEEECG
T ss_pred             CEEEEEEeCeEEEEECCEEEEEeCCceEEEEEEecCCChHHHHHHHHHHhheeecccccCC-ccCCHhHcCCcEEEeeee
Confidence            55 8899999999999999999999999999999999999999999999999999999886 999999999999999999


Q ss_pred             ccccc-CcCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEe
Q psy11634         97 TLYHG-LKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLE  162 (178)
Q Consensus        97 TL~g~-~KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~ld  162 (178)
                      ||||+ .||||||||+||+|++|++||++|+++|++.+  .+|++|+|||||+|+++|||||||+||
T Consensus        80 TL~a~~~KG~rPsF~~Aa~p~~A~~ly~~f~~~l~~~~--~~v~~G~FGA~M~V~l~NDGPvT~~ld  144 (145)
T d1jkea_          80 TLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQE--MNTQTGRFAADMQVSLVNDGPVTFWLQ  144 (145)
T ss_dssp             GGGSBCSSSSSCBCSSBCCHHHHHHHHHHHHHHHHHTT--CCEEECCTTSCEEEEEEEEEEEEEEEE
T ss_pred             eeeeeecCCCCceecccCCHHHHHHHHHHHHHHHHhcC--CCceeCCCCCCcEEEEEEcCCEEEEEE
Confidence            99998 59999999999999999999999999999875  579999999999999999999999998

>d1j7ga_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=5.7e-68  Score=420.63  Aligned_cols=141  Identities=31%  Similarity=0.499  Sum_probs=136.0

Q ss_pred             ee-eEEEeceeEEEECCEEEEEECCeEEEEEecccCCCHHHHHHHHHHHhceeecccCCCccccccccccCCeeeeeecc
Q psy11634         18 FK-QLVKHTPFVCLVDSNVISSIGMGLCILIGISRHDTEKDMDYIVNKILKLKIFENEEGKRWASSVSDKKYEILCISQF   96 (178)
Q Consensus        18 m~-~lQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~d~~~~a~Kil~LRiF~d~~gk~~~~Sv~D~~geIL~VSQF   96 (178)
                      |+ +||||++|+|+|||+.+++|++|||+||||+++||+++++|||+||++||||+|++|| ||+||+|++||||+||||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~Gl~vlvgi~~~D~~~~~~~~~~Kil~lRiF~d~~gk-~~~sv~d~~geiLvVSQF   79 (144)
T d1j7ga_           1 MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDENDK-MNLNVQQAQGELLIVSQF   79 (144)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTTSC-EEECTTTTTCEEEEEECG
T ss_pred             CEEEEEEeCeEEEEECCEEEEEECCCcEEEEEEcCCCChHHHHHHHHHHhheEeeCCCCcc-cccchhhCCCcEEEeeee
Confidence            55 8899999999999999999999999999999999999999999999999999999886 899999999999999999


Q ss_pred             cccccC-cCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCceeeCccCceeEEEEEeCCceEEEEe
Q psy11634         97 TLYHGL-KGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDLSKVKDGKFGAHMSVNIVNDGPVTIPLE  162 (178)
Q Consensus        97 TL~g~~-KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~~~Vk~G~FGa~M~V~l~NDGPVTi~ld  162 (178)
                      ||||++ ||||||||.||+|++|++||++|+++|++.+   +|++|+|||||+|+++|||||||+||
T Consensus        80 TL~a~~~KG~RPsF~~Aa~p~~A~~ly~~fv~~l~~~~---~v~~G~FGa~M~V~l~NdGPvT~~ld  143 (144)
T d1j7ga_          80 TLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKL---PVSTGQFAADMQVSLTNDGPVTFWLN  143 (144)
T ss_dssp             GGGCBCSSTTSCBCTTBCCHHHHHHHHHHHHHHHHTTS---CEEECCTTSCCEEEEEEEEEEEEEEE
T ss_pred             eeeeeecCCcceeeecccCHHHHHHHHHHHHHHHhcCC---CceeCEeCCCcEEEEEECCCeEEEEe
Confidence            999985 9999999999999999999999999999754   69999999999999999999999998

>d1tc5a_ c.110.1.1 (A:) probable eukaryotic D-amino acid tRNA deacylase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: probable eukaryotic D-amino acid tRNA deacylase
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=2.3e-65  Score=420.21  Aligned_cols=146  Identities=22%  Similarity=0.355  Sum_probs=135.9

Q ss_pred             eee-eEEEeceeEEEEC-CEEEEEECCeEEEEEecccCC-----CHHHHHHHHHHHhceeecccCCCc---ccccccccc
Q psy11634         17 YFK-QLVKHTPFVCLVD-SNVISSIGMGLCILIGISRHD-----TEKDMDYIVNKILKLKIFENEEGK---RWASSVSDK   86 (178)
Q Consensus        17 ~m~-~lQRV~~AsV~Vd-~~~v~~Ig~GllvlvGi~~~D-----t~~d~~~~a~Kil~LRiF~d~~gk---~~~~Sv~D~   86 (178)
                      +|| +||||++|+|+|| ++++++|++|||+||||+++|     |+++++||++||++||||+|++||   .|++||+|+
T Consensus         3 ~MR~vIQRV~~AsV~Vd~g~~v~~Ig~GLlvlvGi~k~D~~~~dte~~~~~l~~Kil~lRIF~de~gk~nl~~~~Sv~Di   82 (187)
T d1tc5a_           3 TIRVMLQAMDQGHLLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTKIFTHFSPEKMINQPQSLEEC   82 (187)
T ss_dssp             EEEEEEEEESEEEEECSSSSCEEEECSEEEEEEEEECCTTCCCCCHHHHHHHHHHHHHSCCBSCSCTTCSSCCCBCSTTC
T ss_pred             eEEEEEEEeCeEEEEECCCeEEEEECCceEEEEEEeeCCCcccChHHHHHHHHHHHhheEeecCCCcccccccccccccc
Confidence            455 8899999999997 789999999999999997655     799999999999999999999998   478899999


Q ss_pred             C-CeeeeeecccccccCcCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCC---------------------------Cce
Q psy11634         87 K-YEILCISQFTLYHGLKGNGLTFHHAMGGADSEVFYNKFLEKLKTAYDL---------------------------SKV  138 (178)
Q Consensus        87 ~-geIL~VSQFTL~g~~KG~rPsF~~A~~p~~A~~LY~~Fv~~lr~~~~~---------------------------~~V  138 (178)
                      . ||||+||||||||++||||||||.||+|+.|++||++|+++||+.|++                           .+|
T Consensus        83 ~G~eiLvVSQFTL~a~~KG~RPsF~~Aa~pe~A~~Ly~~fv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V  162 (187)
T d1tc5a_          83 PEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRFCHFVRVARGVDESRVDANGAPRSEGDAPKAEGWIKYNSRV  162 (187)
T ss_dssp             TTCEEEEEECGGGGCEEETTEEECTTBCCHHHHHHHHHHHHHHHHHHTTCCTTSBCTTSSBSSGGGSCCSSSCCCCCSCE
T ss_pred             CCCeEEEEEeEEEEeecCCCCCChhhcCCHHHHHHHHHHHHHHHHHhccccccccccccccccccccccchhhhccCcee
Confidence            5 599999999999999999999999999999999999999999987653                           379


Q ss_pred             eeCccCceeEEEEEeCCceEEEEe
Q psy11634        139 KDGKFGAHMSVNIVNDGPVTIPLE  162 (178)
Q Consensus       139 k~G~FGa~M~V~l~NDGPVTi~ld  162 (178)
                      ++|+|||||+|+|+|||||||+||
T Consensus       163 ~~G~FGa~M~V~l~NdGPvT~~ld  186 (187)
T d1tc5a_         163 ISGTFGNRQGLRFESEGPFTHMFD  186 (187)
T ss_dssp             EECCTTSCCCEEEEESCCCCEEEE
T ss_pred             eECCCCCCeEEEEEeCCCEEEEEe
Confidence            999999999999999999999998