Psyllid ID: psy11681
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 181 | 2.2.26 [Sep-21-2011] | |||||||
| P11883 | 453 | Aldehyde dehydrogenase, d | yes | N/A | 0.988 | 0.395 | 0.5 | 4e-50 | |
| P30838 | 453 | Aldehyde dehydrogenase, d | yes | N/A | 0.988 | 0.395 | 0.5 | 8e-50 | |
| P47740 | 484 | Fatty aldehyde dehydrogen | yes | N/A | 0.994 | 0.371 | 0.486 | 2e-48 | |
| P30839 | 484 | Fatty aldehyde dehydrogen | no | N/A | 0.994 | 0.371 | 0.491 | 6e-48 | |
| P47739 | 453 | Aldehyde dehydrogenase, d | no | N/A | 0.988 | 0.395 | 0.483 | 1e-47 | |
| Q1JPA0 | 468 | Aldehyde dehydrogenase fa | yes | N/A | 0.988 | 0.382 | 0.488 | 2e-47 | |
| P30907 | 239 | Aldehyde dehydrogenase, d | no | N/A | 0.988 | 0.748 | 0.477 | 2e-47 | |
| P43353 | 468 | Aldehyde dehydrogenase fa | no | N/A | 0.988 | 0.382 | 0.477 | 8e-47 | |
| A3RF36 | 453 | Aldehyde dehydrogenase, d | no | N/A | 0.988 | 0.395 | 0.466 | 4e-46 | |
| P51648 | 485 | Fatty aldehyde dehydrogen | no | N/A | 0.994 | 0.371 | 0.469 | 9e-46 |
| >sp|P11883|AL3A1_RAT Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 197 bits (500), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 125/180 (69%), Gaps = 1/180 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D ++++A RR WGK +N+GQTC+APDYILC +Q QI+ + K L +Y E
Sbjct: 216 PCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGED 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S+ Y RI++D+HFQR+K L+ + +A GG D S R+I+PTILVDV P P+M EE
Sbjct: 276 AKQSRDYGRIINDRHFQRVKGLIDNQ-KVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP++PI+ V S EAIQFIN R KPL LY+FS+N +V + I +T SG + ND ++H
Sbjct: 335 IFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVH 394
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes. Rattus norvegicus (taxid: 10116) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 5 |
| >sp|P30838|AL3A1_HUMAN Aldehyde dehydrogenase, dimeric NADP-preferring OS=Homo sapiens GN=ALDH3A1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 196 bits (497), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 123/180 (68%), Gaps = 1/180 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D + ++++A RR WGK +N+GQTC+APDYILC +Q QI+ + K L +Y E
Sbjct: 216 PCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGED 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S+ Y RI+S +HFQR+ L+ +A GG DA+ R+I+PTIL DV P P+M EE
Sbjct: 276 AKKSRDYGRIISARHFQRVMGLIEGQ-KVAYGGTGDAATRYIAPTILTDVDPQSPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP+LPI+ V S EAIQFIN R KPL LY+FSSN +V + I +T SG + ND ++H
Sbjct: 335 IFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVH 394
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|P47740|AL3A2_MOUSE Fatty aldehyde dehydrogenase OS=Mus musculus GN=Aldh3a2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID ++++A RR WGK +N GQTCIAPDYILC +Q QI+ + K + +Y E
Sbjct: 213 PCYIDRDCDLDVACRRIAWGKYMNCGQTCIAPDYILCEASLQNQIVQKIKETVKDFYGEN 272
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
++ S Y RI++ +HF+RL+SL+ IA GG+MD + R+++PTIL DV P +M EE
Sbjct: 273 IKASPDYERIINLRHFKRLQSLLKGQ-KIAFGGEMDEATRYLAPTILTDVDPNSKVMQEE 331
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI++V++ EAI FIN R KPL LY+FS N ++ + I +T SG + ND +MH
Sbjct: 332 IFGPILPIVSVKNVDEAINFINDREKPLALYVFSRNNKLIKRVIDETSSGGVTGNDVIMH 391
Query: 181 Y 181
+
Sbjct: 392 F 392
|
Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P30839|AL3A2_RAT Fatty aldehyde dehydrogenase OS=Rattus norvegicus GN=Aldh3a2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 189 bits (481), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID ++++A RR WGK +N GQTCIAPDYILC Q QI+ + K + +Y E
Sbjct: 213 PCYIDRDCDLDVACRRITWGKYMNCGQTCIAPDYILCEASSQDQIVQKIKDTVKDFYGEN 272
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
V+ S Y RI++ +HF+R+KSL+ IA GG+ D + R+I+PTIL DV P +M EE
Sbjct: 273 VKASPDYERIINLRHFKRIKSLLEGQ-KIAFGGETDEATRYIAPTILTDVDPNSKVMQEE 331
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI++V++ EAI FIN R KPL LY+FS N ++ + I +T SG + ND +MH
Sbjct: 332 IFGPILPIVSVKNVEEAINFINDREKPLALYIFSHNNKLIKRVIDETSSGGVTGNDVIMH 391
Query: 181 Y 181
+
Sbjct: 392 F 392
|
Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P47739|AL3A1_MOUSE Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus GN=Aldh3a1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 123/180 (68%), Gaps = 1/180 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D ++++A RR WGK +N+GQTC+APDYILC +Q +I+ + K L +Y E
Sbjct: 216 PCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNEIVEKLKKSLKDFYGED 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S Y RI++D+HFQR+ +L+ S +A GG D R+I+PTILVDV P P+M EE
Sbjct: 276 AKQSHDYGRIINDRHFQRVINLIDSK-KVAHGGTWDQPSRYIAPTILVDVDPQSPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP++PI+ V S EAI+FIN R KPL LY+FS+N +V + I +T SG + ND ++H
Sbjct: 335 IFGPVMPIVCVRSLDEAIKFINQREKPLALYVFSNNDKVIKKMIAETSSGGVTANDVIVH 394
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes and in preventing corneal damage caused by ultraviolet light. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q1JPA0|AL3B1_BOVIN Aldehyde dehydrogenase family 3 member B1 OS=Bos taurus GN=ALDH3B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 123/180 (68%), Gaps = 1/180 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D + + + R + +C NAGQTC+APDY+LCS ++QAQ++ ++ + +Y +
Sbjct: 216 PCYVDDNCDPQTVANRVAFFRCFNAGQTCVAPDYVLCSPEMQAQLVPALQSAITRFYGDD 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
Q S + RI+S KHFQRL+ L+ S G + +GG D D +I+PT+LVDV+ TDP+M EE
Sbjct: 276 PQSSPNLGRIISQKHFQRLRGLL-SCGRVVIGGQSDECDLYIAPTVLVDVQETDPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+NV S +AI FIN R KPL LY FS+++QV + + QT SG C ND MH
Sbjct: 335 IFGPILPIVNVRSLGQAIDFINRREKPLALYAFSNSSQVVKRVLAQTSSGGFCGNDGFMH 394
|
Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|P30907|AL3A1_BOVIN Aldehyde dehydrogenase, dimeric NADP-preferring (Fragment) OS=Bos taurus GN=ALDH3A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 121/180 (67%), Gaps = 1/180 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D ++++A RR WGK +N+GQTC+APDYILC +Q+Q++ + K L +Y E
Sbjct: 2 PHYVDKDRDLDIACRRIAWGKFMNSGQTCVAPDYILCDPSIQSQVVEKLKKSLKEFYGED 61
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S+ Y RI++ +HFQR+ L+ +A GG DA+ R+I+PTIL DV P P+M EE
Sbjct: 62 AKKSRDYGRIINSRHFQRVMGLLEGQ-KVAYGGTGDATTRYIAPTILTDVDPESPVMQEE 120
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
+FGP+LPI+ V S EAIQFI R KPL LY+FS N +V + I +T SG + ND V+H
Sbjct: 121 VFGPVLPIMCVRSLEEAIQFITQREKPLALYVFSPNDKVIKKMIAETSSGGVTANDVVVH 180
|
This protein preferentially oxidizes aromatic aldehyde substrates. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|P43353|AL3B1_HUMAN Aldehyde dehydrogenase family 3 member B1 OS=Homo sapiens GN=ALDH3B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 186 bits (472), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 124/180 (68%), Gaps = 1/180 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D + + + R W + NAGQTC+APDY+LCS ++Q ++L ++ + +Y +
Sbjct: 216 PCYVDDNCDPQTVANRVAWFRYFNAGQTCVAPDYVLCSPEMQERLLPALQSTITRFYGDD 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
Q S + RI++ K FQRL++L+ G +A+GG D SDR+I+PT+LVDV+ +P+M EE
Sbjct: 276 PQSSPNLGRIINQKQFQRLRALL-GCGRVAIGGQSDESDRYIAPTVLVDVQEMEPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+NV+S EAI+FIN R KPL LY FS+++QV + + QT SG C ND MH
Sbjct: 335 IFGPILPIVNVQSLDEAIEFINRREKPLALYAFSNSSQVVKRVLTQTSSGGFCGNDGFMH 394
|
Oxidizes medium and long chain saturated and unsaturated aldehydes. Metabolizes also benzaldehyde. Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde. May not metabolize short chain aldehydes. May use both NADP(+) and NAD(+) as cofactors. May have a protective role against the cytotoxicity induced by lipid peroxidation. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|A3RF36|AL3A1_CANFA Aldehyde dehydrogenase, dimeric NADP-preferring OS=Canis familiaris GN=ALDH3A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 120/180 (66%), Gaps = 1/180 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D ++++A RR WGK +N+GQTC+APDYILC +Q QI+ + K L +Y E
Sbjct: 216 PCYVDKDCDLDIACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKALKEFYGED 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S+ Y RI++ +HFQR+ L+ +A GG DA+ R+I+PTIL+DV +M EE
Sbjct: 276 AKKSRDYGRIINSRHFQRVMGLMEGQ-KVAYGGTGDAATRYIAPTILIDVDTQSQVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP++PI+ V S EAIQFIN R KPL LY+FS N ++ + I +T SG + ND ++H
Sbjct: 335 IFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSLNDKMIKKMIAETSSGGVTANDVIVH 394
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes. Canis familiaris (taxid: 9615) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|P51648|AL3A2_HUMAN Fatty aldehyde dehydrogenase OS=Homo sapiens GN=ALDH3A2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (463), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 120/181 (66%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID ++++ RR WGK +N GQTCIAPDYILC +Q QI+ + K + +Y E
Sbjct: 213 PCYIDKDCDLDIVCRRITWGKYMNCGQTCIAPDYILCEASLQNQIVWKIKETVKEFYGEN 272
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
++ S Y RI++ +HF+R+ SL+ IA GG+ D + R+I+PT+L DV P +M EE
Sbjct: 273 IKESPDYERIINLRHFKRILSLLEGQ-KIAFGGETDEATRYIAPTVLTDVDPKTKVMQEE 331
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+ V++ EAI FIN R KPL LY+FS N ++ + I +T SG + ND +MH
Sbjct: 332 IFGPILPIVPVKNVDEAINFINEREKPLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMH 391
Query: 181 Y 181
+
Sbjct: 392 F 392
|
Catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Active on a variety of saturated and unsaturated aliphatic aldehydes between 6 and 24 carbons in length. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 181 | ||||||
| 328722598 | 587 | PREDICTED: aldehyde dehydrogenase, dimer | 1.0 | 0.308 | 0.618 | 5e-66 | |
| 193683363 | 502 | PREDICTED: aldehyde dehydrogenase, dimer | 1.0 | 0.360 | 0.618 | 6e-66 | |
| 158292610 | 495 | AGAP005124-PC [Anopheles gambiae str. PE | 0.994 | 0.363 | 0.585 | 2e-62 | |
| 442622744 | 563 | aldehyde dehydrogenase type III, isoform | 0.994 | 0.319 | 0.618 | 3e-62 | |
| 442622746 | 497 | aldehyde dehydrogenase type III, isoform | 0.994 | 0.362 | 0.618 | 3e-62 | |
| 24586250 | 498 | aldehyde dehydrogenase type III, isoform | 0.994 | 0.361 | 0.618 | 3e-62 | |
| 310772302 | 496 | MIP27310p [Drosophila melanogaster] | 0.994 | 0.362 | 0.618 | 3e-62 | |
| 281360301 | 563 | aldehyde dehydrogenase type III, isoform | 0.994 | 0.319 | 0.618 | 3e-62 | |
| 195581224 | 536 | GD10252 [Drosophila simulans] gi|1941924 | 0.994 | 0.335 | 0.613 | 4e-62 | |
| 195332127 | 563 | GM20791 [Drosophila sechellia] gi|194124 | 0.994 | 0.319 | 0.613 | 4e-62 |
| >gi|328722598|ref|XP_003247611.1| PREDICTED: aldehyde dehydrogenase, dimeric NADP-preferring-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 147/181 (81%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
PLYID +VN+++AV+R +WGKCINAGQTCIAPDY+LC+RQVQ + +AK +L +WYT+
Sbjct: 303 PLYIDGTVNMDIAVKRIIWGKCINAGQTCIAPDYVLCTRQVQNSFVEKAKQLLKAWYTDD 362
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S +CRIVS+KHF RL L+ +SG+IA+GG D D +I PTIL DV+PTDPIM EE
Sbjct: 363 PKNSPDFCRIVSEKHFVRLLDLMTNSGSIAVGGRHDKKDLYIEPTILTDVEPTDPIMKEE 422
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+ V++A++AI +IN+R KPLTLY+FSS+ ++Q LF+ QT SGS C+NDTV H
Sbjct: 423 IFGPILPILIVDNAYDAINYINSRSKPLTLYVFSSDQEMQNLFMRQTSSGSFCVNDTVSH 482
Query: 181 Y 181
Y
Sbjct: 483 Y 483
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193683363|ref|XP_001950992.1| PREDICTED: aldehyde dehydrogenase, dimeric NADP-preferring-like isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 147/181 (81%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
PLYID +VN+++AV+R +WGKCINAGQTCIAPDY+LC+RQVQ + +AK +L +WYT+
Sbjct: 216 PLYIDGTVNMDIAVKRIIWGKCINAGQTCIAPDYVLCTRQVQNSFVEKAKQLLKAWYTDD 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S +CRIVS+KHF RL L+ +SG+IA+GG D D +I PTIL DV+PTDPIM EE
Sbjct: 276 PKNSPDFCRIVSEKHFVRLLDLMTNSGSIAVGGRHDKKDLYIEPTILTDVEPTDPIMKEE 335
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+ V++A++AI +IN+R KPLTLY+FSS+ ++Q LF+ QT SGS C+NDTV H
Sbjct: 336 IFGPILPILIVDNAYDAINYINSRSKPLTLYVFSSDQEMQNLFMRQTSSGSFCVNDTVSH 395
Query: 181 Y 181
Y
Sbjct: 396 Y 396
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158292610|ref|XP_314005.4| AGAP005124-PC [Anopheles gambiae str. PEST] gi|157017072|gb|EAA09458.5| AGAP005124-PC [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 141/181 (77%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D + NI +A RR LWGK INAGQTCIAPDYILCS+QVQ Q L +A+ VL+ WY
Sbjct: 215 PCYLDGTANIAIAARRILWGKFINAGQTCIAPDYILCSKQVQKQFLEEARKVLNEWYGAN 274
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S CRI++ HFQRL SL+ + +A+GG+ D DR+ISPTIL+DVK TDP+M +E
Sbjct: 275 PKDSPDLCRIINQNHFQRLTSLLKGA-NVAIGGETDLQDRYISPTILIDVKSTDPVMQDE 333
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+NV++A++AI+FIN+RP PL +Y+F+ + ++QELF+ T SGSMC+NDT+M
Sbjct: 334 IFGPILPILNVDNAYDAIKFINSRPPPLVMYIFTLDTKIQELFVTGTRSGSMCLNDTIMQ 393
Query: 181 Y 181
Y
Sbjct: 394 Y 394
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|442622744|ref|NP_610285.5| aldehyde dehydrogenase type III, isoform P [Drosophila melanogaster] gi|324096482|gb|ADY17770.1| RE08771p [Drosophila melanogaster] gi|440214164|gb|AAM68894.5| aldehyde dehydrogenase type III, isoform P [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID SV++ AV+R LWGK IN GQTCIAPDYILCS++VQ + + +AK VL WY E
Sbjct: 282 PCYIDKSVDMRTAVKRILWGKLINCGQTCIAPDYILCSKEVQEKFIVEAKDVLKEWYGEN 341
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+Q S R+++ +FQRL L+ SG +A+GG+ DAS+RFI PTILVDVK TDPIM EE
Sbjct: 342 IQSSPDLSRVINANNFQRLLGLM-KSGRVAVGGNYDASERFIEPTILVDVKETDPIMEEE 400
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI NVESA++AI+FINAR PL LY+F+ A+VQ LFI+ T SG +C+NDT+MH
Sbjct: 401 IFGPILPIFNVESAYDAIKFINARESPLVLYIFTPTAEVQNLFINGTQSGGLCVNDTIMH 460
Query: 181 Y 181
Y
Sbjct: 461 Y 461
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|442622746|ref|NP_001260772.1| aldehyde dehydrogenase type III, isoform R [Drosophila melanogaster] gi|442622750|ref|NP_001260774.1| aldehyde dehydrogenase type III, isoform T [Drosophila melanogaster] gi|440214165|gb|AGB93305.1| aldehyde dehydrogenase type III, isoform R [Drosophila melanogaster] gi|440214167|gb|AGB93307.1| aldehyde dehydrogenase type III, isoform T [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID SV++ AV+R LWGK IN GQTCIAPDYILCS++VQ + + +AK VL WY E
Sbjct: 216 PCYIDKSVDMRTAVKRILWGKLINCGQTCIAPDYILCSKEVQEKFIVEAKDVLKEWYGEN 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+Q S R+++ +FQRL L+ SG +A+GG+ DAS+RFI PTILVDVK TDPIM EE
Sbjct: 276 IQSSPDLSRVINANNFQRLLGLM-KSGRVAVGGNYDASERFIEPTILVDVKETDPIMEEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI NVESA++AI+FINAR PL LY+F+ A+VQ LFI+ T SG +C+NDT+MH
Sbjct: 335 IFGPILPIFNVESAYDAIKFINARESPLVLYIFTPTAEVQNLFINGTQSGGLCVNDTIMH 394
Query: 181 Y 181
Y
Sbjct: 395 Y 395
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|24586250|ref|NP_724560.1| aldehyde dehydrogenase type III, isoform I [Drosophila melanogaster] gi|281360295|ref|NP_724564.2| aldehyde dehydrogenase type III, isoform K [Drosophila melanogaster] gi|281360297|ref|NP_724561.2| aldehyde dehydrogenase type III, isoform L [Drosophila melanogaster] gi|281360299|ref|NP_724563.2| aldehyde dehydrogenase type III, isoform M [Drosophila melanogaster] gi|21627776|gb|AAM68895.1| aldehyde dehydrogenase type III, isoform I [Drosophila melanogaster] gi|27819929|gb|AAO25005.1| LD32628p [Drosophila melanogaster] gi|27819939|gb|AAO25009.1| LD29384p [Drosophila melanogaster] gi|220950636|gb|ACL87861.1| Aldh-III-PI [synthetic construct] gi|272432369|gb|AAM68897.2| aldehyde dehydrogenase type III, isoform K [Drosophila melanogaster] gi|272432370|gb|AAF59248.2| aldehyde dehydrogenase type III, isoform L [Drosophila melanogaster] gi|272432371|gb|AAM68896.2| aldehyde dehydrogenase type III, isoform M [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID SV++ AV+R LWGK IN GQTCIAPDYILCS++VQ + + +AK VL WY E
Sbjct: 216 PCYIDKSVDMRTAVKRILWGKLINCGQTCIAPDYILCSKEVQEKFIVEAKDVLKEWYGEN 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+Q S R+++ +FQRL L+ SG +A+GG+ DAS+RFI PTILVDVK TDPIM EE
Sbjct: 276 IQSSPDLSRVINANNFQRLLGLM-KSGRVAVGGNYDASERFIEPTILVDVKETDPIMEEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI NVESA++AI+FINAR PL LY+F+ A+VQ LFI+ T SG +C+NDT+MH
Sbjct: 335 IFGPILPIFNVESAYDAIKFINARESPLVLYIFTPTAEVQNLFINGTQSGGLCVNDTIMH 394
Query: 181 Y 181
Y
Sbjct: 395 Y 395
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|310772302|gb|ADP21878.1| MIP27310p [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID SV++ AV+R LWGK IN GQTCIAPDYILCS++VQ + + +AK VL WY E
Sbjct: 216 PCYIDKSVDMRTAVKRILWGKLINCGQTCIAPDYILCSKEVQEKFIVEAKDVLKEWYGEN 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+Q S R+++ +FQRL L+ SG +A+GG+ DAS+RFI PTILVDVK TDPIM EE
Sbjct: 276 IQSSPDLSRVINANNFQRLLGLM-KSGRVAVGGNYDASERFIEPTILVDVKETDPIMEEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI NVESA++AI+FINAR PL LY+F+ A+VQ LFI+ T SG +C+NDT+MH
Sbjct: 335 IFGPILPIFNVESAYDAIKFINARESPLVLYIFTPTAEVQNLFINGTQSGGLCVNDTIMH 394
Query: 181 Y 181
Y
Sbjct: 395 Y 395
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|281360301|ref|NP_724566.3| aldehyde dehydrogenase type III, isoform N [Drosophila melanogaster] gi|272432372|gb|AAM68900.3| aldehyde dehydrogenase type III, isoform N [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID SV++ AV+R LWGK IN GQTCIAPDYILCS++VQ + + +AK VL WY E
Sbjct: 281 PCYIDKSVDMRTAVKRILWGKLINCGQTCIAPDYILCSKEVQEKFIVEAKDVLKEWYGEN 340
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+Q S R+++ +FQRL L+ SG +A+GG+ DAS+RFI PTILVDVK TDPIM EE
Sbjct: 341 IQSSPDLSRVINANNFQRLLGLM-KSGRVAVGGNYDASERFIEPTILVDVKETDPIMEEE 399
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI NVESA++AI+FINAR PL LY+F+ A+VQ LFI+ T SG +C+NDT+MH
Sbjct: 400 IFGPILPIFNVESAYDAIKFINARESPLVLYIFTPTAEVQNLFINGTQSGGLCVNDTIMH 459
Query: 181 Y 181
Y
Sbjct: 460 Y 460
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195581224|ref|XP_002080434.1| GD10252 [Drosophila simulans] gi|194192443|gb|EDX06019.1| GD10252 [Drosophila simulans] | Back alignment and taxonomy information |
|---|
Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 139/181 (76%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID SV + AV+R LWGK IN GQTCIAPDYILCS++VQ + + +AK VL WY E
Sbjct: 256 PCYIDKSVELRTAVKRILWGKLINCGQTCIAPDYILCSKEVQEKFIAEAKDVLKEWYGEN 315
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+Q S R+++ +FQRL L+ SG +A+GG+ DAS+RFI PTILVDVK +DPIM EE
Sbjct: 316 IQSSPDLSRVINANNFQRLLGLM-KSGRVAVGGNYDASERFIEPTILVDVKESDPIMEEE 374
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI NVESA++AI+FINAR PL LY+F+S +VQ LFI+ T SG +C+NDT+MH
Sbjct: 375 IFGPILPIFNVESAYDAIKFINARESPLVLYIFTSETEVQNLFINGTQSGGLCVNDTIMH 434
Query: 181 Y 181
Y
Sbjct: 435 Y 435
|
Source: Drosophila simulans Species: Drosophila simulans Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195332127|ref|XP_002032750.1| GM20791 [Drosophila sechellia] gi|194124720|gb|EDW46763.1| GM20791 [Drosophila sechellia] | Back alignment and taxonomy information |
|---|
Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 139/181 (76%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID SV + AV+R LWGK IN GQTCIAPDYILCS++VQ + + +AK VL WY E
Sbjct: 281 PCYIDKSVELRTAVKRILWGKLINCGQTCIAPDYILCSKEVQEKFIAEAKDVLKEWYGEN 340
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+Q S R+++ +FQRL L+ SG +A+GG+ DAS+RFI PTILVDVK +DPIM EE
Sbjct: 341 IQSSPDLSRVINANNFQRLLGLM-KSGRVAVGGNYDASERFIEPTILVDVKESDPIMEEE 399
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI NVESA++AI+FINAR PL LY+F+S +VQ LFI+ T SG +C+NDT+MH
Sbjct: 400 IFGPILPIFNVESAYDAIKFINARESPLVLYIFTSETEVQNLFINGTQSGGLCVNDTIMH 459
Query: 181 Y 181
Y
Sbjct: 460 Y 460
|
Source: Drosophila sechellia Species: Drosophila sechellia Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 181 | ||||||
| FB|FBgn0010548 | 563 | Aldh-III "Aldehyde dehydrogena | 0.983 | 0.316 | 0.602 | 3e-53 | |
| RGD|2088 | 453 | Aldh3a1 "aldehyde dehydrogenas | 0.988 | 0.395 | 0.5 | 2.3e-46 | |
| UNIPROTKB|I3L3I9 | 380 | ALDH3A1 "Aldehyde dehydrogenas | 0.988 | 0.471 | 0.5 | 1.3e-45 | |
| UNIPROTKB|P30838 | 453 | ALDH3A1 "Aldehyde dehydrogenas | 0.988 | 0.395 | 0.5 | 1.3e-45 | |
| UNIPROTKB|Q1JPA0 | 468 | ALDH3B1 "Aldehyde dehydrogenas | 0.988 | 0.382 | 0.488 | 1.2e-44 | |
| UNIPROTKB|I6L6E1 | 410 | SSC.15124 "Aldehyde dehydrogen | 0.988 | 0.436 | 0.494 | 1.9e-44 | |
| MGI|MGI:1353451 | 453 | Aldh3a1 "aldehyde dehydrogenas | 0.988 | 0.395 | 0.483 | 3.1e-44 | |
| MGI|MGI:1353452 | 484 | Aldh3a2 "aldehyde dehydrogenas | 0.994 | 0.371 | 0.486 | 3.9e-44 | |
| UNIPROTKB|D4A137 | 507 | Aldh3a2 "Aldehyde dehydrogenas | 0.994 | 0.355 | 0.491 | 3.9e-44 | |
| UNIPROTKB|P43353 | 468 | ALDH3B1 "Aldehyde dehydrogenas | 0.988 | 0.382 | 0.477 | 8.1e-44 |
| FB|FBgn0010548 Aldh-III "Aldehyde dehydrogenase type III" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 109/181 (60%), Positives = 135/181 (74%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID SV++ AV+R LWGK IN GQTCIAPDYILCS++VQ + + +AK VL WY E
Sbjct: 281 PCYIDKSVDMRTAVKRILWGKLINCGQTCIAPDYILCSKEVQEKFIVEAKDVLKEWYGEN 340
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+Q S R+++ +FQRL L+ SG +A+GG+ DAS+RFI PTILVDVK TDPIM EE
Sbjct: 341 IQSSPDLSRVINANNFQRLLGLM-KSGRVAVGGNYDASERFIEPTILVDVKETDPIMEEE 399
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFS-SNAQVQELFIHQTHSGSMCINDTVM 179
IFGPILPI NVESA++AI+FINAR KPL +Y+FS SN V+E F T SG N+T+M
Sbjct: 400 IFGPILPIFNVESAYDAIKFINAREKPLVIYVFSNSNKLVKE-FRRSTTSGGFSSNETIM 458
Query: 180 H 180
H
Sbjct: 459 H 459
|
|
| RGD|2088 Aldh3a1 "aldehyde dehydrogenase 3 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 90/180 (50%), Positives = 125/180 (69%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D ++++A RR WGK +N+GQTC+APDYILC +Q QI+ + K L +Y E
Sbjct: 216 PCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGED 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S+ Y RI++D+HFQR+K L+ + +A GG D S R+I+PTILVDV P P+M EE
Sbjct: 276 AKQSRDYGRIINDRHFQRVKGLIDNQ-KVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP++PI+ V S EAIQFIN R KPL LY+FS+N +V + I +T SG + ND ++H
Sbjct: 335 IFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVH 394
|
|
| UNIPROTKB|I3L3I9 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 90/180 (50%), Positives = 123/180 (68%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D + ++++A RR WGK +N+GQTC+APDYILC +Q QI+ + K L +Y E
Sbjct: 143 PCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGED 202
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S+ Y RI+S +HFQR+ L+ +A GG DA+ R+I+PTIL DV P P+M EE
Sbjct: 203 AKKSRDYGRIISARHFQRVMGLIEGQ-KVAYGGTGDAATRYIAPTILTDVDPQSPVMQEE 261
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP+LPI+ V S EAIQFIN R KPL LY+FSSN +V + I +T SG + ND ++H
Sbjct: 262 IFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVH 321
|
|
| UNIPROTKB|P30838 ALDH3A1 "Aldehyde dehydrogenase, dimeric NADP-preferring" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 90/180 (50%), Positives = 123/180 (68%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D + ++++A RR WGK +N+GQTC+APDYILC +Q QI+ + K L +Y E
Sbjct: 216 PCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGED 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S+ Y RI+S +HFQR+ L+ +A GG DA+ R+I+PTIL DV P P+M EE
Sbjct: 276 AKKSRDYGRIISARHFQRVMGLIEGQ-KVAYGGTGDAATRYIAPTILTDVDPQSPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP+LPI+ V S EAIQFIN R KPL LY+FSSN +V + I +T SG + ND ++H
Sbjct: 335 IFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVH 394
|
|
| UNIPROTKB|Q1JPA0 ALDH3B1 "Aldehyde dehydrogenase family 3 member B1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 88/180 (48%), Positives = 123/180 (68%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D + + + R + +C NAGQTC+APDY+LCS ++QAQ++ ++ + +Y +
Sbjct: 216 PCYVDDNCDPQTVANRVAFFRCFNAGQTCVAPDYVLCSPEMQAQLVPALQSAITRFYGDD 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
Q S + RI+S KHFQRL+ L+ S G + +GG D D +I+PT+LVDV+ TDP+M EE
Sbjct: 276 PQSSPNLGRIISQKHFQRLRGLL-SCGRVVIGGQSDECDLYIAPTVLVDVQETDPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+NV S +AI FIN R KPL LY FS+++QV + + QT SG C ND MH
Sbjct: 335 IFGPILPIVNVRSLGQAIDFINRREKPLALYAFSNSSQVVKRVLAQTSSGGFCGNDGFMH 394
|
|
| UNIPROTKB|I6L6E1 SSC.15124 "Aldehyde dehydrogenase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 89/180 (49%), Positives = 121/180 (67%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D + + + R W + N GQTC+APDYILCS + QA++L ++ + +Y +
Sbjct: 216 PCYVDDNCDPQTVANRVAWFRYFNTGQTCVAPDYILCSPETQARLLPALQSAITRFYGDD 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S RI++ KHFQRL+ L+ S G +A+GG D SDR+I+PT+LVDV+ T+P+M EE
Sbjct: 276 PRASPDLGRIINHKHFQRLRGLL-SCGRVAIGGQSDDSDRYIAPTVLVDVQETEPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+NV EAI FIN R KPL LY FS+N+QV + + QT SG C ND MH
Sbjct: 335 IFGPILPILNVRGLDEAIDFINRREKPLALYAFSNNSQVVKRVLAQTSSGGFCGNDGFMH 394
|
|
| MGI|MGI:1353451 Aldh3a1 "aldehyde dehydrogenase family 3, subfamily A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 87/180 (48%), Positives = 123/180 (68%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D ++++A RR WGK +N+GQTC+APDYILC +Q +I+ + K L +Y E
Sbjct: 216 PCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNEIVEKLKKSLKDFYGED 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S Y RI++D+HFQR+ +L+ S +A GG D R+I+PTILVDV P P+M EE
Sbjct: 276 AKQSHDYGRIINDRHFQRVINLIDSK-KVAHGGTWDQPSRYIAPTILVDVDPQSPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP++PI+ V S EAI+FIN R KPL LY+FS+N +V + I +T SG + ND ++H
Sbjct: 335 IFGPVMPIVCVRSLDEAIKFINQREKPLALYVFSNNDKVIKKMIAETSSGGVTANDVIVH 394
|
|
| MGI|MGI:1353452 Aldh3a2 "aldehyde dehydrogenase family 3, subfamily A2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 88/181 (48%), Positives = 124/181 (68%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID ++++A RR WGK +N GQTCIAPDYILC +Q QI+ + K + +Y E
Sbjct: 213 PCYIDRDCDLDVACRRIAWGKYMNCGQTCIAPDYILCEASLQNQIVQKIKETVKDFYGEN 272
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
++ S Y RI++ +HF+RL+SL+ IA GG+MD + R+++PTIL DV P +M EE
Sbjct: 273 IKASPDYERIINLRHFKRLQSLLKGQ-KIAFGGEMDEATRYLAPTILTDVDPNSKVMQEE 331
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI++V++ EAI FIN R KPL LY+FS N ++ + I +T SG + ND +MH
Sbjct: 332 IFGPILPIVSVKNVDEAINFINDREKPLALYVFSRNNKLIKRVIDETSSGGVTGNDVIMH 391
Query: 181 Y 181
+
Sbjct: 392 F 392
|
|
| UNIPROTKB|D4A137 Aldh3a2 "Aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 89/181 (49%), Positives = 123/181 (67%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P YID ++++A RR WGK +N GQTCIAPDYILC +Q QI+ + K + +Y E
Sbjct: 213 PCYIDRDCDLDVACRRITWGKYMNCGQTCIAPDYILCEASLQDQIVQKIKDTVKDFYGEN 272
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
V+ S Y RI++ +HF+R+KSL+ IA GG+ D + R+I+PTIL DV P +M EE
Sbjct: 273 VKASPDYERIINLRHFKRIKSLLEGQ-KIAFGGETDEATRYIAPTILTDVDPNSKVMQEE 331
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI++V++ EAI FIN R KPL LY+FS N ++ + I +T SG + ND +MH
Sbjct: 332 IFGPILPIVSVKNVEEAINFINDREKPLALYIFSHNNKLIKRVIDETSSGGVTGNDVIMH 391
Query: 181 Y 181
+
Sbjct: 392 F 392
|
|
| UNIPROTKB|P43353 ALDH3B1 "Aldehyde dehydrogenase family 3 member B1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 86/180 (47%), Positives = 124/180 (68%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D + + + R W + NAGQTC+APDY+LCS ++Q ++L ++ + +Y +
Sbjct: 216 PCYVDDNCDPQTVANRVAWFRYFNAGQTCVAPDYVLCSPEMQERLLPALQSTITRFYGDD 275
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
Q S + RI++ K FQRL++L+ G +A+GG D SDR+I+PT+LVDV+ +P+M EE
Sbjct: 276 PQSSPNLGRIINQKQFQRLRALL-GCGRVAIGGQSDESDRYIAPTVLVDVQEMEPVMQEE 334
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+NV+S EAI+FIN R KPL LY FS+++QV + + QT SG C ND MH
Sbjct: 335 IFGPILPIVNVQSLDEAIEFINRREKPLALYAFSNSSQVVKRVLTQTSSGGFCGNDGFMH 394
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 181 | |||
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-104 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 4e-89 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 2e-78 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 5e-77 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 2e-72 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-69 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-62 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 3e-57 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 6e-48 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 3e-41 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 2e-39 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 7e-36 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 2e-29 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 8e-26 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 6e-20 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 2e-18 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 3e-18 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 4e-18 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 6e-18 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 2e-17 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 4e-17 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 4e-17 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 5e-17 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 8e-17 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-16 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 3e-16 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 3e-16 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 4e-16 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 5e-16 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 3e-15 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 4e-15 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-14 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-13 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 2e-13 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 3e-13 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 3e-13 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 5e-13 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-12 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 1e-12 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-12 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 2e-12 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 3e-12 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 4e-12 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 5e-12 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 6e-12 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 7e-12 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 8e-12 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 2e-11 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 3e-11 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 3e-11 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 5e-11 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 2e-10 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 2e-10 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 4e-10 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 4e-10 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 4e-10 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 7e-10 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 8e-10 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 9e-10 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 3e-09 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 3e-09 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 3e-09 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 4e-09 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 7e-09 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 8e-09 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-08 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-08 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-08 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 1e-08 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 3e-08 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 3e-08 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 5e-08 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 9e-08 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-07 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 2e-07 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 2e-07 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 5e-07 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 7e-07 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 8e-07 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-06 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-06 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-06 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 2e-06 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 5e-06 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-05 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 2e-05 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 2e-05 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 3e-05 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 5e-05 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 8e-05 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 1e-04 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-04 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 2e-04 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 4e-04 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 0.001 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 0.001 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 0.004 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 304 bits (782), Expect = e-104
Identities = 98/181 (54%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D S +I++A RR WGK INAGQTCIAPDY+LC+ +VQ + + K L +Y E
Sbjct: 212 PCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGED 271
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S Y RI++D+HFQRLK L+ S G +A+GG D +R+I+PT+L DVKP+DP+M EE
Sbjct: 272 PKESPDYGRIINDRHFQRLKKLL-SGGKVAIGGQTDEKERYIAPTVLTDVKPSDPVMQEE 330
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+ V + EAI+FIN+R KPL LY+FS+N +V + T SG +C+NDT+MH
Sbjct: 331 IFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMH 390
Query: 181 Y 181
Y
Sbjct: 391 Y 391
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 266 bits (683), Expect = 4e-89
Identities = 86/181 (47%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P +D N+E+A RR WGK +NAGQTCIAPDY+L ++ +++ + K + +Y E
Sbjct: 212 PCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGED 271
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S Y RI++++HF RL SL+ G + +GG +D +R+I+PTIL DV P P+M EE
Sbjct: 272 PKESPDYGRIINERHFDRLASLL-DDGKVVIGGQVDKEERYIAPTILDDVSPDSPLMQEE 330
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILPI+ + EAI+FIN+RPKPL LYLFS + VQE + +T SG +C+ND ++H
Sbjct: 331 IFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLH 390
Query: 181 Y 181
Sbjct: 391 A 391
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 240 bits (614), Expect = 2e-78
Identities = 80/180 (44%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P +D N++LA +R +WGK +NAGQTC+APDY+L V+ + + + K + +Y E
Sbjct: 212 PCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGED 271
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
S Y RI+++KHF RL L+ + G I GG+ D +I PTIL +V DP+M EE
Sbjct: 272 PLESPDYGRIINEKHFDRLAGLLDN-GKIVFGGNTDRETLYIEPTILDNVTWDDPVMQEE 330
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGPILP++ ++ EAI+ I +RPKPL LYLFS + +V++ + G CINDT+MH
Sbjct: 331 IFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMH 390
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 237 bits (607), Expect = 5e-77
Identities = 76/182 (41%), Positives = 119/182 (65%), Gaps = 1/182 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P+ +D S N+++A RR WGK +NAGQTC+APDY+L R ++ + + K + ++ E
Sbjct: 221 PVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGED 280
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSS-GTIALGGDMDASDRFISPTILVDVKPTDPIMGE 119
+ S+ Y RIV++ H +RL L+ G + GG++D +++++PTI+V+ P+M E
Sbjct: 281 PKKSEDYSRIVNEFHTKRLAELIKDHGGKVVYGGEVDIENKYVAPTIIVNPDLDSPLMQE 340
Query: 120 EIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVM 179
EIFGPILPI+ E+ E ++FIN+RPKPL LY F + + +EL + T SG++ IND V
Sbjct: 341 EIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVF 400
Query: 180 HY 181
H
Sbjct: 401 HL 402
|
Length = 493 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 224 bits (572), Expect = 2e-72
Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 6/187 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWY--T 58
P +D + +++ A ++ WGK +NAGQTCIAPDY+ V+ + KA ++ +Y
Sbjct: 212 PTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKD 271
Query: 59 EQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFISPTILVDVKPTD 114
+ S RIV+D+HF RLK L+ + + GG DA+ R+I+PT+L +V P
Sbjct: 272 AARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIAPTVLTNVTPDM 331
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
IM EEIFGP+LPII E E I++INA+PKPL LY+FS + + +T SG + +
Sbjct: 332 KIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVV 391
Query: 175 NDTVMHY 181
ND V+H+
Sbjct: 392 NDVVLHF 398
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 217 bits (554), Expect = 1e-69
Identities = 81/182 (44%), Positives = 117/182 (64%), Gaps = 1/182 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P+ + + ++ELA +R LWGK NAGQ C+APDY+L V + + + K VLD +Y
Sbjct: 220 PVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGG 279
Query: 61 VQGSKHYCRIVSDKHFQRLKSLV-HSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGE 119
S Y RIV+ +HF RLKSL+ + G + +GG+MD + RFI PTI+ DV D +M E
Sbjct: 280 ANASPDYTRIVNPRHFNRLKSLLDTTKGKVVIGGEMDEATRFIPPTIVSDVSWDDSLMSE 339
Query: 120 EIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVM 179
E+FGP+LPII V+ EAI+ IN+R PL LY+F+ + + + +T SG + INDT++
Sbjct: 340 ELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLI 399
Query: 180 HY 181
H
Sbjct: 400 HV 401
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 199 bits (508), Expect = 1e-62
Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 8/187 (4%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P I ++ A R +GK +NAGQTC+APDY+L + + AKA + Y
Sbjct: 213 PAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYP-T 271
Query: 61 VQGSKHYCRIVSDKHFQRLKSLV---HSSG----TIALGGDMDASDRFISPTILVDVKPT 113
+ + Y I++++H+ RL+ L+ + G + G+ A+ R + PT++++V
Sbjct: 272 LADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDD 331
Query: 114 DPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMC 173
+M EEIFGPILPI+ +S EAI +INARP+PL LY F + Q+ + +THSG +
Sbjct: 332 MRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVT 391
Query: 174 INDTVMH 180
INDT++H
Sbjct: 392 INDTLLH 398
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 3e-57
Identities = 78/186 (41%), Positives = 113/186 (60%), Gaps = 6/186 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGK--CINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT 58
P+ +DS+V++++AVRR GK C N GQ CIAPDY+L +++ K L+ ++
Sbjct: 213 PVIVDSTVDLKVAVRRIAGGKWGC-NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFG 271
Query: 59 EQVQGSKHYCRIVSDKHFQRLKSLVHSSGT---IALGGDMDASDRFISPTILVDVKPTDP 115
E + SK RIV+ HFQRL L+ I GG+ D + +I PTIL+D
Sbjct: 272 ENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYIEPTILLDPPLDSS 331
Query: 116 IMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
IM EEIFGP+LPII V+ E+I+ IN+RPKPL Y+F+ N +++ + +T SG + N
Sbjct: 332 IMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFN 391
Query: 176 DTVMHY 181
DTV+ Y
Sbjct: 392 DTVVQY 397
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 6e-48
Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 14/187 (7%)
Query: 4 IDSSVNIELAVRRFL---WGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
+ SS + ++AV R + WG C AGQ CIA DY+L + ++ K+ + ++ E
Sbjct: 226 LSSSRDTKVAVNRIVGGKWGSC--AGQACIAIDYVLVEERFAPILIELLKSTIKKFFGEN 283
Query: 61 VQGSKHYCRIVSDKHFQRLKSL-----VHSSGTIALGGDMDASDRFISPTILVDVKPTDP 115
+ SK RI++ KHFQRL +L V +S I GG +D FI PTIL++ P D
Sbjct: 284 PRESKSMARILNKKHFQRLSNLLKDPRVAAS--IVHGGSIDEKKLFIEPTILLN-PPLDS 340
Query: 116 -IMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
IM EEIFGP+LPII V+ ++I FIN++PKPL +Y F++N +++ + +T SGS+
Sbjct: 341 DIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTF 400
Query: 175 NDTVMHY 181
ND ++ Y
Sbjct: 401 NDAIIQY 407
|
Length = 484 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 3e-41
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 15/191 (7%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWY--- 57
PL + +++ AV+ ++G NAGQ C A +L + + + + + +
Sbjct: 211 PLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGN 270
Query: 58 --TEQVQGSKHYCRIVSDKHFQRLKSLV----HSSGTIALGGDMDASD--RFISPTILVD 109
++S R+ + + + GG F+ PT+L D
Sbjct: 271 PLDPDTD----MGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTD 326
Query: 110 VKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHS 169
V P PI EEIFGP+LP+I + EAI+ N L +F+ + + + +
Sbjct: 327 VDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEA 386
Query: 170 GSMCINDTVMH 180
G++ IND +
Sbjct: 387 GTVWINDYSVG 397
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 139 bits (351), Expect = 2e-39
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 6/185 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGK--CINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT 58
P+ +DS ++++ VRR + GK C N GQ CI+PDYIL +++ ++++ K L+++Y
Sbjct: 224 PVVVDSDTDLKVTVRRIIAGKWGC-NNGQACISPDYILTTKEYAPKVIDAMKKELETFYG 282
Query: 59 EQVQGSKHYCRIVSDKHFQRLKSLVHS---SGTIALGGDMDASDRFISPTILVDVKPTDP 115
+ SK RIV+ HF RL L+ S I GG+ D + I+PTIL+DV
Sbjct: 283 KNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSL 342
Query: 116 IMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
IM EEIFGP+LPI+ + + E+ I +RPKPL YLF+ N +++E F +G + +N
Sbjct: 343 IMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVN 402
Query: 176 DTVMH 180
D +H
Sbjct: 403 DIAVH 407
|
Length = 484 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 7e-36
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P + +++ AV ++G NAGQ C A ++ V + + + A S
Sbjct: 248 PAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAASL---- 303
Query: 61 VQG-----SKHYCRIVSDKHFQRLKSLV---HSSGTIALGGDMDASDRFISPTILVDVKP 112
G S ++S++ R++ + + G L G F+ PTIL V P
Sbjct: 304 KVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTP 363
Query: 113 TDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSM 172
I EEIFGP+LP+I + EAI+ N L +F+ + + +G +
Sbjct: 364 DMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMV 423
Query: 173 CINDTVMHY 181
IND
Sbjct: 424 GINDYTGGA 432
|
Length = 472 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 111 bits (281), Expect = 2e-29
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 16/187 (8%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSW---- 56
PL + +++ AV ++G NAGQ C A +L + + + + S
Sbjct: 241 PLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLKVGD 300
Query: 57 -YTEQVQ-GSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGD-MDASDRFISPTILVD 109
G ++S K +R+ S + + + GG+ F+ PT+L D
Sbjct: 301 PLDPDTDIGP-----LISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLAD 355
Query: 110 VKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHS 169
V P I EEIFGP+L +I + EAI+ N L +F+++ + + +
Sbjct: 356 VTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEA 415
Query: 170 GSMCIND 176
G + IND
Sbjct: 416 GMVWIND 422
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 8e-26
Identities = 43/181 (23%), Positives = 67/181 (37%), Gaps = 54/181 (29%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P+ +D +++ AV ++G NAGQ C A +L V I ++
Sbjct: 207 PVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLL----VHESIYDEFVE--------- 253
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+L T+LVDV P PI EE
Sbjct: 254 -----------------KLV------------------------TVLVDVDPDMPIAQEE 272
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP+LP+I + EAI N LT +F+ + + +G++ IND+ +
Sbjct: 273 IFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIG 332
Query: 181 Y 181
Sbjct: 333 V 333
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 85.7 bits (213), Expect = 6e-20
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P+ + + ++E A +WG +NAGQTCI+ + + V + + + +
Sbjct: 232 PMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARL--------VAK 283
Query: 61 VQGSKHYCRIVSDKHF------------QR-LKSLVHSSGTIALGG-DMDASDRFISPTI 106
+ + + D +R + V GG + F PT+
Sbjct: 284 ARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTV 343
Query: 107 LVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQ 166
L DV +M EE FGP+LP++ V EAI N L+ +FS + E +
Sbjct: 344 LTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARR 403
Query: 167 THSGSMCINDTVM 179
+G++ IND ++
Sbjct: 404 LEAGAVSINDVLL 416
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 2e-18
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSK--- 65
+++LAV+ + + IN GQ C + + V I ++ L E+++ K
Sbjct: 256 DLDLAVKAIVDSRIINCGQVCTCAERVY----VHEDIYDEFMEKL----VEKMKAVKVGD 307
Query: 66 ------HYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR--FISPTILVDVKPT 113
+V++ +++ +V + T+ GG ++ F PT+L +V+
Sbjct: 308 PFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQD 367
Query: 114 DPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
I+ EEIFGP+LP++ S EAI+ N LT Y+++ N
Sbjct: 368 MEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTEN 410
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 80.9 bits (201), Expect = 3e-18
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 32/198 (16%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-----AKAV--- 52
P + +++ AV + K NAGQTC+ + I V I ++ + V
Sbjct: 232 PFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIY----VHESIYDEFVEKLVERVKKL 287
Query: 53 -----LDSWYTEQVQ-GSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD-RF 101
LD E G +++++ +++++LV + + GG F
Sbjct: 288 KVGNGLD----EGTDMGP-----LINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYF 338
Query: 102 ISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQE 161
PT+L DV IM EE FGP+ PII ++ E I N P L Y+F+ +
Sbjct: 339 YEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAW 398
Query: 162 LFIHQTHSGSMCINDTVM 179
+G + IN ++
Sbjct: 399 RVAEALEAGMVGINTGLI 416
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 4e-18
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ--AKA----VLD 54
PL + +++LAV +G ++ GQ C+A IL V + + + AKA V D
Sbjct: 214 PLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGD 273
Query: 55 SWYTEQV-QGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFISPTILVD 109
G +++++ R+ ++V + + GG F PT+L D
Sbjct: 274 P-RDPDTVIGP-----LINERQVDRVHAIVEDAVAAGARLLTGGT--YEGLFYQPTVLSD 325
Query: 110 VKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHS 169
V P PI EEIFGP+ P+I + EA++ N L+ +F+ + + F + +
Sbjct: 326 VTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLET 385
Query: 170 GSMC-INDTVMH 180
G M IND ++
Sbjct: 386 G-MVHINDQTVN 396
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 6e-18
Identities = 43/196 (21%), Positives = 78/196 (39%), Gaps = 19/196 (9%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P + +++ + G ++GQ CI + ++ ++ ++L +
Sbjct: 238 PAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRV----QAL 293
Query: 61 VQGSKHYCRI-----VSDKHFQRLKSLVH---SSG-TIALGGDM-----DASDRFISPTI 106
QG + +S F RL+ LV G + GG + PT+
Sbjct: 294 RQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTL 353
Query: 107 LVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQ 166
LVDV P I EE+FGP++ ++ EA++ N+ L +F + + Q
Sbjct: 354 LVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQ 413
Query: 167 THSGSMCIND-TVMHY 181
+G + IND V +Y
Sbjct: 414 LETGMVAINDFGVNYY 429
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 2e-17
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 19/182 (10%)
Query: 10 IELAVRRFLWGKC-INAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQG----- 63
+E AV R + C N+GQ+C AP +L R A+ A A +++ V G
Sbjct: 254 LEKAVPRGV-AACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAY----VVGDPRDP 308
Query: 64 SKHYCRIVSDKHFQRLKSLVHS---SGTIALGGDMDASDR-----FISPTILVDVKPTDP 115
+ + S F R++ + G + G + F+ PT+ DV P
Sbjct: 309 ATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMT 368
Query: 116 IMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
I EEIFGP+L II + EAI N P L Y++S++ + + +G + IN
Sbjct: 369 IAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHIN 428
Query: 176 DT 177
Sbjct: 429 GA 430
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 4e-17
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQ----AQILNQAKA--VLD 54
P+ + ++E AV + G+ NAGQ C A IL +V ++ + K V D
Sbjct: 238 PMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGD 297
Query: 55 SWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFISPTILVDV 110
G ++S + +R+++LV+ + G I GG D F PT+L +
Sbjct: 298 PLDESTDLGP-----LISPEAVERMENLVNDAVEKGGKILYGGKRDEGS-FFPPTVLEND 351
Query: 111 KPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSG 170
P +M EE+FGP+LPI V+ EA++ N+ L +F+++ + +G
Sbjct: 352 TPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAG 411
Query: 171 SMCINDT 177
+ IND+
Sbjct: 412 GVVINDS 418
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 77.5 bits (192), Expect = 4e-17
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 22/184 (11%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSK--- 65
+++ AV+ + G+ NAGQ+CIA + V + L+ + E + K
Sbjct: 218 DLDKAVKTAVKGRLQNAGQSCIAAKRFI----VHEDV---YDEFLEK-FVEAMAALKVGD 269
Query: 66 ------HYCRIVSDKHFQRLKSLVHSS----GTIALGGD-MDASDRFISPTILVDVKPTD 114
+ L V + T+ LGG D F PT+L DV P
Sbjct: 270 PMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGM 329
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
P EE+FGP+ +I V+ EAI N P L +F+++ + E + +G + I
Sbjct: 330 PAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFI 389
Query: 175 NDTV 178
N V
Sbjct: 390 NGMV 393
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 5e-17
Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 18/165 (10%)
Query: 5 DSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT------ 58
+ +++ A G N G+ C A +L ++ + L + A W
Sbjct: 245 ADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDP 304
Query: 59 EQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGD---MDASDRFISPTILVDVK 111
G+ +VS+ HF ++ + S + GG + F+ PT+ V
Sbjct: 305 ATRMGA-----LVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVT 359
Query: 112 PTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
P I EEIFGP+L +I +S EA+ N L +++S+
Sbjct: 360 PDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSD 404
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 8e-17
Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 18/183 (9%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ--AKA----VLDSWYTEQVQ 62
+++LA WG ++ GQ C+A L V + AKA V D T QV
Sbjct: 233 DLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDP-ATGQV- 290
Query: 63 GSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFISPTILVDVKPTDPIMG 118
+++ + R+ ++V S + GG D F PT+L VKP P
Sbjct: 291 ---ALGPLINARQLDRVHAIVDDSVAAGARLEAGGTYD--GLFYRPTVLSGVKPGMPAFD 345
Query: 119 EEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIND-T 177
EEIFGP+ P+ +S EA+ N L+ + S + + +G + IND T
Sbjct: 346 EEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQT 405
Query: 178 VMH 180
V
Sbjct: 406 VND 408
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 1e-16
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 18/183 (9%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVL------DSWYTEQVQ 62
+++ A ++G NAG+ C + +L + + A D E
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301
Query: 63 GSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD--RFISPTILVDVKPTDPI 116
G+ I+++ ++ V + T+ LGG+ AS F PTI DV P I
Sbjct: 302 GA-----IINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAI 356
Query: 117 MGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIND 176
EEIFGP+L ++ ++ EAI N L+ ++S + + +G++ +N
Sbjct: 357 AREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVN- 415
Query: 177 TVM 179
T +
Sbjct: 416 TFL 418
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 3e-16
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 2 LYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILNQAKAVLDSWYTEQ 60
+ +D + + EL V + GQ C A SR + L
Sbjct: 276 IIVDETADFELVVEGVVVSAFGFQGQKCSA-----ASRLILTQGAYEPVLERLLKRAERL 330
Query: 61 VQG-----SKHYCRIVSDKHFQRLKSLVH---SSGTIALGGDMDASD-RFISPTILVDVK 111
G ++ + ++ S + + G + LGG + F++PT++ +V
Sbjct: 331 SVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVP 390
Query: 112 PTDPIMGEEIFGPILPIINVESA--FEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHS 169
P I EEIFGP+L +I + EA++ N+ P LT ++S + E + H
Sbjct: 391 PKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHV 450
Query: 170 GSMCIND 176
G++ IN
Sbjct: 451 GNLYINR 457
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 74.9 bits (185), Expect = 3e-16
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ---------AKA 51
+ +D+ ++E AV R + G NAGQ CI+ I V I ++ K
Sbjct: 236 AVIVDADADLEKAVERCVSGAFANAGQVCISVQRIF----VHEDIYDEFLERFVAATKKL 291
Query: 52 VLDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFISPTIL 107
V+ E ++S+ +R++ V + + GG D + PT+L
Sbjct: 292 VVGDPLDEDTDVGP----MISEAEAERIEEWVEEAVEGGARLLTGGKRD--GAILEPTVL 345
Query: 108 VDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQT 167
DV P ++ EE+F P++ + ++ EAI N P L +F+++ Q +
Sbjct: 346 TDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAAREL 405
Query: 168 HSGSMCINDT 177
G + IND+
Sbjct: 406 EVGGVMINDS 415
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 4e-16
Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 6/173 (3%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-EQVQGSKHY 67
+++ AVR G N GQ C A +L + + L + ++ S + +
Sbjct: 240 DLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQM 299
Query: 68 CRIVSDKHFQRLKSLV----HSSGTIALGGD-MDASDRFISPTILVDVKPTDPIMGEEIF 122
+VS F R+ V + GG A F+ PTI V P I EEIF
Sbjct: 300 GPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIF 359
Query: 123 GPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
GP++ ++ EA++ N L +++ + +G++ IN
Sbjct: 360 GPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWIN 412
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 5e-16
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-AKAVLDSWYTE 59
P + ++++AV+ L K N+GQTC+ + IL VQ I ++ A+A +
Sbjct: 275 PFIVFDDADLDVAVKGALASKFRNSGQTCVCANRIL----VQEGIYDKFAEAFSKAVQKL 330
Query: 60 QV---------QGSKHYCRIVSDKHFQRLKSLVH---SSGTIALGGDMDASD--RFISPT 105
V QG ++++ Q+++S V S G L G S F PT
Sbjct: 331 VVGDGFEEGVTQGP-----LINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPT 385
Query: 106 ILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQ 158
+L DV I EE+FGP+ P+ ++ EAI N L Y+F+ + Q
Sbjct: 386 VLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQ 438
|
Length = 498 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 3e-15
Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 27/192 (14%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSR-----QVQAQILNQAKA---- 51
+ +D +++ A + GQ C A CSR V + L +
Sbjct: 287 AIIVDEDADLDEAAEGIVRSAFGFQGQKCSA-----CSRVIVHESVYDEFLERLVERTKA 341
Query: 52 --VLDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVH---SSGTIALGGDMDASDR---FIS 103
V D E G ++ R++ + S G + LGG++ F+
Sbjct: 342 LKVGDPEDPEVYMGP-----VIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQ 396
Query: 104 PTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELF 163
PTI DV P + EEIFGP+L +I + EA++ N LT +FS + + E
Sbjct: 397 PTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERA 456
Query: 164 IHQTHSGSMCIN 175
+ G++ N
Sbjct: 457 RREFEVGNLYAN 468
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 4e-15
Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 22/170 (12%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P + +++ AV + K NAGQTC+ + + V I ++ L E
Sbjct: 233 PFIVFDDADLDQAVEGAMASKFRNAGQTCVCANRLY----VHDGIYDEFAKKL----AEA 284
Query: 61 VQ----------GSKHYCRIVSD---KHFQRLKSLVHSSGTIALGGDMDASD-RFISPTI 106
V+ G I K + + V + GG F PT+
Sbjct: 285 VKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTV 344
Query: 107 LVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
L +V + EE FGP+ P+ + E I N L Y FS +
Sbjct: 345 LSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRD 394
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 1e-14
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P + +I+ AV ++GK ++ GQ C+A + I+ V + + + + E+
Sbjct: 246 PFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEK--------FVER 297
Query: 61 VQGSK---------HYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFISPTIL 107
V+ ++++ L + + T+ +GG+ A + PT+L
Sbjct: 298 VKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE--AEGNVLEPTVL 355
Query: 108 VDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQT 167
DV I EEIFGP+ PII + EA++ N L+ +F+S+ + F +
Sbjct: 356 SDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRI 415
Query: 168 HSGSMCINDT 177
+G IND
Sbjct: 416 DAGMTHINDQ 425
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 67.5 bits (166), Expect = 1e-13
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILC----SRQVQAQILNQAKA-VLDSWYTEQVQ- 62
++E + AGQ C+A + + + +++ +AK + +
Sbjct: 258 DLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADM 317
Query: 63 GSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR-----FISPTILVDVKPT 113
G ++S +R++ L+ S + L G F+ PTIL +V P
Sbjct: 318 GP-----VISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPD 372
Query: 114 DPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSSNAQVQELFIHQTH 168
I EEIFGP+L I+ V++ EAI INA P Y +F+ + F +
Sbjct: 373 MKIYKEEIFGPVLSIVRVDTLDEAIAIINANP-----YGNGAAIFTRSGAAARKFQREVD 427
Query: 169 SGSMCIN 175
+G + IN
Sbjct: 428 AGMVGIN 434
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 2e-13
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 19/191 (9%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ--AKA----VLD 54
PL + + +++ AVR +G ++ GQ C++ I+ V + + + A+A V D
Sbjct: 234 PLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGD 293
Query: 55 SWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFISPTILVDV 110
+ V G ++S + +R+K V + + GG D F PT+L DV
Sbjct: 294 PRDPDTVIGP-----LISPRQVERIKRQVEDAVAKGAKLLTGGKYDG--NFYQPTVLTDV 346
Query: 111 KPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSG 170
P I EE FGP+ +I + A EA++ N L+ + +++ Q + SG
Sbjct: 347 TPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESG 406
Query: 171 SMC-INDTVMH 180
M IND +
Sbjct: 407 -MVHINDPTIL 416
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 3e-13
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSR-----QVQAQILNQAKAVLDS 55
+ +D +++LA + +GQ C A CSR V ++L + +
Sbjct: 292 AIVVDEDADLDLAAESIVASAFGFSGQKCSA-----CSRAIVHEDVYDEVLEKVVELTKE 346
Query: 56 WYTEQVQGSKHYCRIVSDKHFQRLKSLVH---SSGTIALGGDMDASD-RFISPTILVDVK 111
+ + + +++ F ++ S + G + LGG+ D S FI PTI DV
Sbjct: 347 LTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVD 406
Query: 112 PTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
P IM EEIFGP++ I + A++ N LT + S+N
Sbjct: 407 PKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNN 451
|
Length = 514 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 3e-13
Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 30/154 (19%)
Query: 8 VNIELAVRRFLWGKCINAGQTCIA------PDYI---LCSRQVQAQILNQAKAVLDSWYT 58
V+I+ + WG IN+GQ C A + I C V AV+
Sbjct: 234 VDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALA----KAAVVGDGLD 289
Query: 59 EQVQ-GSKHYCRIVSDKHFQRLKSLV----HSSGTIALGGDMDASD-RFISPTILVDVKP 112
G + + + ++K LV + GG+ FI PTI+ D
Sbjct: 290 PGTTLGP-----VQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPE 344
Query: 113 TDPIMGEEIFGPILPII---NVESAFEAIQFINA 143
I+ EE FGP+LP++ + + E I N
Sbjct: 345 GSRIVDEEQFGPVLPVLKYSDED---EVIARAND 375
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 5e-13
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 17/186 (9%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQ----AQILNQAKA--VLD 54
P+ +D +++ A+ G +AGQ CI+ I ++ + K V D
Sbjct: 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGD 295
Query: 55 SWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFISPTILVDV 110
+ G ++S++ +R++ V + + GG+ D PT+L DV
Sbjct: 296 PLDEDTDVGP-----LISEEAAERVERWVEEAVEAGARLLCGGERD--GALFKPTVLEDV 348
Query: 111 KPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSG 170
+ EE FGP++PII + EAI+ N+ L +F+ + V + G
Sbjct: 349 PRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVG 408
Query: 171 SMCIND 176
+ +ND
Sbjct: 409 GVMVND 414
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 1e-12
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYC 68
+++ A L+G +N+GQ C++ + I+ + + + + KA E++
Sbjct: 224 DLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAA-----AEKLFAGPVVL 278
Query: 69 RI-VSDKHFQRLKSLVHSS----GTIALGG--DMDASDRFISPTILVDVKPTDPIMGEEI 121
VS R+K LV + + +GG D S + PTIL +V P I EE
Sbjct: 279 GSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEES 338
Query: 122 FGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
FGP++ II V+ EA++ N L+ +F+ + + SG++ IN +H
Sbjct: 339 FGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVH 397
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 1e-12
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 5/182 (2%)
Query: 2 LYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV 61
+ +D +IELA + AGQ C A + +V +++ + + +S
Sbjct: 289 VIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPP 348
Query: 62 QGSKHYCRIVSD-KHFQRLKSLVH---SSGTIALGGDMDASD-RFISPTILVDVKPTDPI 116
+ Y V D K F ++ + + G + GG D S FI PTI DV +
Sbjct: 349 DSADVYVGPVIDQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKGYFIGPTIFADVDRKARL 408
Query: 117 MGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIND 176
EEIFGP++ I EA++ N LT + S+N + G++ N
Sbjct: 409 AQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFNR 468
Query: 177 TV 178
+
Sbjct: 469 NI 470
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 1e-12
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 18/181 (9%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-----QG 63
++E A+ + NAGQTC A +L R + ++L + +
Sbjct: 240 DLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVER-----FRALRVGPGLE 294
Query: 64 SKHYCRIVSDKHFQRLKSLV----HSSGTIALGG----DMDASDRFISPTILVDVKPTDP 115
++S K R++ V I GG A F++PT+L DV P
Sbjct: 295 DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSR 354
Query: 116 IMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
+ EEIFGP+L ++ + EAI N L +++ + + +G + +N
Sbjct: 355 LAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVN 414
Query: 176 D 176
+
Sbjct: 415 N 415
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 64.5 bits (158), Expect = 2e-12
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 71 VSDKHFQRLKSLVHSS----GTIALGGDMDASDR-----FISPTILVDVKPTDPIMGEEI 121
+S +H +++ V + TI GG F+ PT++ + + EEI
Sbjct: 303 ISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEI 362
Query: 122 FGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
FGP++ +I + EAI+ N P L Y+++ + + +G++ +N
Sbjct: 363 FGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVN 416
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 3e-12
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 18/150 (12%)
Query: 22 CINAGQTCIAPDYILCSRQVQAQILNQAKAVL------DSWYTEQVQGSKHYCRIVSDKH 75
NAGQ C +L R +++ A D V G ++S
Sbjct: 259 MHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGP-----LISAAQ 313
Query: 76 FQRLKSLVHSS----GTIALGGDMDAS-DR--FISPTILVDVKPTDPIMGEEIFGPILPI 128
R++ + + GG A D+ ++ PT+ DV I EEIFGP+L +
Sbjct: 314 RDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVV 373
Query: 129 INVESAFEAIQFINARPKPLTLYLFSSNAQ 158
I + EA++ N L+ ++S++
Sbjct: 374 IPYDDDDEAVRIANDSDYGLSGGVWSADVD 403
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 4e-12
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-AKAVLDSWYTEQVQGSK-H 66
+++LAV+ + + IN+GQ C + + + + Q +N+ +A+ + + +
Sbjct: 194 DLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIA 253
Query: 67 YCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD-RFISPTILVDVKPTDPIMGEEI 121
+++ +R++ V + +ALGG + PT+L+DV+ IM EE
Sbjct: 254 MGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEET 313
Query: 122 FGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
FGP+LP++ ++ EAI N LT +++ N
Sbjct: 314 FGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQN 348
|
Length = 409 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 5e-12
Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+ +++ A + G N+GQ+C + + I V I + +
Sbjct: 230 PAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIY----VHESIYDAFVEAFVAVVKGY 285
Query: 61 VQG-----SKHYCRIVSDKHFQRLKSLVH---SSGTIALGG-----DMDASDRFISPTIL 107
G S +VS + +++ + + G AL + A +++PT+L
Sbjct: 286 KLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVL 345
Query: 108 VDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQT 167
+V + +M EE FGP++ I+ V+S EAI +N LT +++ + E Q
Sbjct: 346 TNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQL 405
Query: 168 HSGSMCIN 175
+G++ +N
Sbjct: 406 ETGTVFMN 413
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 6e-12
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 20/186 (10%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
+ + +++LAVR L+ AGQ C ++ V + L + +Q
Sbjct: 251 AIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKA-----YKQ 305
Query: 61 VQ------GSKHYCRIVSDKHFQR----LKSLVHSSGTIALGG---DMDASDRFISPTIL 107
V+ +++ ++ ++ GT+ GG D ++ PTI+
Sbjct: 306 VRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIV 365
Query: 108 VDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQT 167
V I+ EE F PIL +I +S EAI N P+ L+ +F+ + ++E F
Sbjct: 366 TGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTED--LREAFRWLG 423
Query: 168 HSGSMC 173
GS C
Sbjct: 424 PKGSDC 429
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 7e-12
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 26/153 (16%)
Query: 8 VNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSK-- 65
+++ AV + G AGQTC+A +L VQ I ++ L + + +
Sbjct: 241 ADLDAAVNGVVAGIFAAAGQTCVAGSRLL----VQRSIYDEFVERL----VARARAIRVG 292
Query: 66 -------HYCRIVSDKHFQRLKSLVHSS----GTIALGG-----DMDASDRFISPTILVD 109
+ +++ ++++ V + + GG + F PTIL D
Sbjct: 293 DPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILAD 352
Query: 110 VKPTDPIMGEEIFGPILPIINVESAFEAIQFIN 142
V I EE+FGP+L +I + EAI N
Sbjct: 353 VTNDMRIAQEEVFGPVLSVIPFDDEEEAIALAN 385
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 8e-12
Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 25/169 (14%)
Query: 4 IDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQG 63
+DS +++ A +R ++G AGQ+CI+ +L V + ++ K+ L + G
Sbjct: 238 VDSDADLDFAAQRIIFGAFYQAGQSCISVQRVL----VHRSVYDEFKSRLVARVKALKTG 293
Query: 64 --------------SKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVD 109
R+ + V + + GG D + + PTIL D
Sbjct: 294 DPKDDATDVGPMISESEAERV-----EGWVNEAVDAGAKLLTGGKRDGA--LLEPTILED 346
Query: 110 VKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQ 158
V P + EE+FGP++ + + EA+ +N L +F+ + +
Sbjct: 347 VPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLE 395
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 2e-11
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 24 NAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-EQVQGSKHYCRIVSDKHFQRLKSL 82
N GQ CIA +L + + L K +W + + ++ H + S
Sbjct: 297 NQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSF 356
Query: 83 VH---SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQ 139
+ S G + L G I PTI VDV P + EEIFGP+L + S +A+Q
Sbjct: 357 IREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQ 416
Query: 140 FIN 142
N
Sbjct: 417 LAN 419
|
Length = 494 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 3e-11
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 16/186 (8%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKA------VLD 54
P + +++ AV +G N GQ C A I + + + + KA V D
Sbjct: 257 PNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGD 316
Query: 55 SWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD-RFISPTILVD 109
+ + QG VS F ++ S + S T+ GG+ S FI PT+ D
Sbjct: 317 PFDPDTFQGP-----QVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTD 371
Query: 110 VKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHS 169
VK I EEIFGP++ I+ ++ E I+ N L +F+ + +
Sbjct: 372 VKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKA 431
Query: 170 GSMCIN 175
G++ +N
Sbjct: 432 GTVWVN 437
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 3e-11
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 16/186 (8%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKA------VLD 54
P + ++E AV +G N GQ C A I + + + + K V D
Sbjct: 260 PNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGD 319
Query: 55 SWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD-RFISPTILVD 109
+ + QG + VS ++R+ S + S T+ GG ++ FI PTI D
Sbjct: 320 PFAEDTFQGPQ-----VSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTD 374
Query: 110 VKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHS 169
V I+ EEIFGP++ +I ++ EAI+ N L +F++N + +
Sbjct: 375 VTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKA 434
Query: 170 GSMCIN 175
G++ +N
Sbjct: 435 GTVWVN 440
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 5e-11
Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 20/192 (10%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-- 58
P + +++ AV+ G N+GQ C A I + + + + + Y
Sbjct: 259 PALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVG 318
Query: 59 -----EQVQGSKHYCRIVSDKHFQRLKSLVH----SSGTIALGG----DMDASDRFISPT 105
+ V G VS + R+ S + + GG + FI PT
Sbjct: 319 SPFDDDTVVGP-----QVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPT 373
Query: 106 ILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIH 165
I DV I+ EEIFGP++ I ++ EAI+ N L +F+ + +
Sbjct: 374 IFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVAR 433
Query: 166 QTHSGSMCINDT 177
+ +G + IN +
Sbjct: 434 ELEAGMVWINSS 445
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 2e-10
Identities = 40/195 (20%), Positives = 77/195 (39%), Gaps = 35/195 (17%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQV----QAQILNQAKA----- 51
PL + ++E A + G N+GQ C A IL V ++ ++ A
Sbjct: 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGD 292
Query: 52 ----------VLDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRF 101
V+D Q++ R++ + + LG +
Sbjct: 293 PMDPATDMGTVIDEEAAIQIEN--------------RVEEAIAQGARVLLGNQRQGA--L 336
Query: 102 ISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQE 161
+PT+L V P ++ EE FGP+ P+I V+ EAI N+ L+ + +++ +
Sbjct: 337 YAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIK 396
Query: 162 LFIHQTHSGSMCIND 176
+ + G++ +N+
Sbjct: 397 RLVERLDVGTVNVNE 411
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 2e-10
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 21/164 (12%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ------ 62
+I+LAVR L+ AGQ C +L + +L Q +L + +QV+
Sbjct: 280 DIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQ---LLTVY--KQVKIGDPLE 334
Query: 63 -----GSKHYCRIVSDKHFQR-LKSLVHSSGTIALGGD-MDASDRFISPTILVDVKPTDP 115
G H S K+F++ ++ + G I GG +++ F+ PTI V++ P
Sbjct: 335 KGTLLGPLHTPE--SKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTI-VEISPDAD 391
Query: 116 IMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQV 159
++ EE+FGP+L ++ ++ EAI+ N+ P+ L+ +F+ N +
Sbjct: 392 VVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPET 435
|
Length = 508 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 4e-10
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P+ + V+++ AV ++G GQ C A +L V +I ++ L W +
Sbjct: 266 PIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLL----VHERIASEFLEKLVKW-AKN 320
Query: 61 VQGSKHY---CR---IVSDKHFQRLKSLVH---SSG-TIALGGDMDASDR---FISPTIL 107
++ S CR +VS+ ++++ + S G TI GG + FI PTI+
Sbjct: 321 IKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTII 380
Query: 108 VDVKPTDPIMGEEIFGPILPIINVESAFEAIQFIN 142
DV + I EE+FGP+L + + EAI+ N
Sbjct: 381 TDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELAN 415
|
Length = 503 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 4e-10
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 18/146 (12%)
Query: 10 IELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVL------DSWYTEQVQG 63
++ AV + +N GQ C+A IL R +++ A + D G
Sbjct: 260 LDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIG 319
Query: 64 SKHYCRIVSDKHFQRLKSLVH---SSG-TIALGG-DMDASDR--FISPTILVDVKPTDPI 116
+ S + +R++ + + G + GG DR F+ PT+ DV I
Sbjct: 320 P-----LASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRI 374
Query: 117 MGEEIFGPILPIINVESAFEAIQFIN 142
EEIFGP+L +I + +A++ N
Sbjct: 375 AQEEIFGPVLSVIPYDDEDDAVRIAN 400
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 4e-10
Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 18/190 (9%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKA-----VLDS 55
PL + ++E AV + G +AGQ C + ++++ + L + L
Sbjct: 248 PLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERTERIKLGD 307
Query: 56 WYTEQVQGSKHYCRIVSDKHFQRLKSLVH----SSGTIALGGDMDASDR-----FISPTI 106
+ E + ++S H ++ S + T+A GG + F+ PT+
Sbjct: 308 PFDEATEMGP----LISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEPTV 363
Query: 107 LVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQ 166
D I+ EEIFGP++ ++ E I N L +F+++ Q
Sbjct: 364 FADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVADQ 423
Query: 167 THSGSMCIND 176
+G++ IN
Sbjct: 424 LEAGTVWINT 433
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 7e-10
Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 28/193 (14%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
PL + +++LAV + G + GQ C A ++ V I ++ L E+
Sbjct: 250 PLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLI----VTEGIHDRFVEAL----VER 301
Query: 61 VQGSK---------HYCRIVSDKHFQRLKSL------VHSSGTIALGGD-MDASDR--FI 102
+ K +VS++ + K L + GG+ + D ++
Sbjct: 302 TKALKVGDALDEGVDIGPVVSERQLE--KDLRYIEIARSEGAKLVYGGERLKRPDEGYYL 359
Query: 103 SPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQEL 162
+P + V I EEIFGP+ +I V EA+ N L+ + +++ +
Sbjct: 360 APALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATH 419
Query: 163 FIHQTHSGSMCIN 175
F + +G + +N
Sbjct: 420 FKRRVEAGVVMVN 432
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 8e-10
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQV----QAQILNQAKAV-LDS 55
P+ + +++LA+ LW GQ C A ++ V + + +AK + +
Sbjct: 250 PIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGD 309
Query: 56 WYTEQVQGSKHYCRIVSDKHFQRLKSLV----HSSGTIALGG-----DMDASDRFISPTI 106
E+ ++++ +++ + T+ LGG F+ PT+
Sbjct: 310 GLDEETD----MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTV 365
Query: 107 LVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFIN 142
DV P I EEIFGP++ +I V S EAI+ N
Sbjct: 366 FTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIAN 401
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 9e-10
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 4 IDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAK------AVLDSWY 57
+ +++LAVR L+ AGQ C ++ + ++L + K + D
Sbjct: 253 VMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLD 312
Query: 58 TEQVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGD-MDASDRFISPTILVDVKPTDPI 116
+ G H V D + ++ GT+ GG +D ++ PTI V+ PI
Sbjct: 313 DGTLVGPLHTKAAV-DNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTI-VEGLSDAPI 370
Query: 117 MGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMC 173
+ EE F PIL ++ ++ EAI + N P+ L+ +F+++ ++ F GS C
Sbjct: 371 VKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTD--LRNAFRWLGPKGSDC 425
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 3e-09
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 14/185 (7%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSW---- 56
P + +++ AV + N GQ C A + + + +AKA
Sbjct: 257 PFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGD 316
Query: 57 -YTEQV-QGSKHYCRIVSDKHFQRLKSLVH---SSGTIALGGDMDASD-RFISPTILVDV 110
+ + V QG + + ++ + L + H T+ GGD S +I PTI DV
Sbjct: 317 PFRKGVEQGPQ----VDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDV 372
Query: 111 KPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSG 170
K I +EIFGP+ I+ ++ E I+ N L +FS N +G
Sbjct: 373 KDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAG 432
Query: 171 SMCIN 175
++ +N
Sbjct: 433 TVWVN 437
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 3e-09
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 101 FISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160
++ PT+L V PT EEIFGP+L ++ ++ EAI INA P +F+ +
Sbjct: 359 WVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAA 418
Query: 161 ELFIHQTHSGSMCIN 175
F H+ G + +N
Sbjct: 419 RRFQHEIEVGQVGVN 433
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 3e-09
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Query: 8 VNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-EQVQGSKH 66
+I+ V L ++ GQ C AP+ R +++ + K L S+ + S
Sbjct: 263 ADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVM 322
Query: 67 YCRIVSDKHFQRLKSLV----HSSGTIALGGD-MDASDRFISPTILVDVKPTDPIMGEEI 121
+ + + HF ++ S + I GG+ + F+ PT+++ +M EE
Sbjct: 323 FGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREET 382
Query: 122 FGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
FGP++ + E E IQ IN P LT ++++N +I + +G++ +N MH
Sbjct: 383 FGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVN---MH 438
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 4e-09
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Query: 7 SVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKH 66
S ++E V + G GQ C A + + + + A L
Sbjct: 295 SADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGT 354
Query: 67 Y-CRIVSDKHFQRLKSLV-----HSSG-TIALGGDMDASD-RFISPTILVDVKPTDPIMG 118
+ ++ +K F ++ + S TI GG D S F+ PT++ P +P+M
Sbjct: 355 FMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMK 414
Query: 119 EEIFGPILPI 128
EEIFGP+L +
Sbjct: 415 EEIFGPVLTV 424
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 7e-09
Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 5/155 (3%)
Query: 8 VNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-AKAVLDSWYTEQVQGSKH 66
+++ AV NAGQ C A + V + + +AV +
Sbjct: 239 ADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTE 298
Query: 67 YCRIVSDKHFQRLKSLVH---SSGTIALGGD-MDASDRFISPTILVDVKPTDPIMGEEIF 122
+ S +R+ V + + GG + F PT++ V D I+ EEIF
Sbjct: 299 MGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIF 358
Query: 123 GPILPIINVESAFEAIQFINARPKPLTLYLFSSNA 157
GP++ + + EAI+ N L +++ +
Sbjct: 359 GPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDV 393
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 8e-09
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 40/201 (19%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P + + + E AV + L G NAGQ C A +L V +S + +
Sbjct: 249 PNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLL---------------VEESIHDKF 293
Query: 61 VQG-SKHYCRI---------------VSDKHFQRLKSLVH---SSG-TIALGG---DMDA 97
V ++ +I VS +H +++ S + G + GG D
Sbjct: 294 VAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDE 353
Query: 98 SDR--FISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155
+ F+ PTI DV T I+ EEIFGP+L + ++ EAI+ N P L +++
Sbjct: 354 LAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTK 413
Query: 156 NAQVQELFIHQTHSGSMCIND 176
+ + +G++ IND
Sbjct: 414 DIARANRVARRLRAGTVWIND 434
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 1e-08
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 70 IVSDKHFQRLKSLV-----HSSGTIALGGDM-----DASDRFISPTILVDVKPTDPIMGE 119
I+S+K F ++ + S T+ GG + A F+ PTI V + E
Sbjct: 302 IISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLARE 361
Query: 120 EIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
EIFGP+L I + E I N L Y+++ +
Sbjct: 362 EIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRD 398
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 1e-08
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQ----ILNQAKAVL--D 54
PL I ++E AV + ++ GQ C + R ++ + ++ + K + D
Sbjct: 230 PLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGD 289
Query: 55 SWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR------FISP 104
+ G+ ++S++H +++ + S+ + GG+ + ++SP
Sbjct: 290 PLDEDTQMGA-----LISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSP 344
Query: 105 TILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFI 164
+L D I+ EEIFGP++ I+ ++ E I+ N L +F+ + Q I
Sbjct: 345 CVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVI 404
Query: 165 HQTHSGSMCIND 176
Q +G+ IN
Sbjct: 405 AQLQAGTCWINT 416
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 1e-08
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSW---- 56
P+ + ++E AV ++G N GQ C A +L + L + ++
Sbjct: 235 PIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGD 294
Query: 57 -YTEQVQ-GSKHYCRIVSDKHFQRLKSLV---HSSG-TIALGGDMDASDR---FISPTIL 107
E V+ G +VS ++++ S + G + GG A FI+PT+
Sbjct: 295 PLEEGVRLGP-----LVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVF 349
Query: 108 VDVKPTDPIMGEEIFGPILPIINVESAFEAIQFIN 142
DV I EEIFGP+L + + + EAI N
Sbjct: 350 ADVPTDSRIWREEIFGPVLCVRSFATEDEAIALAN 384
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 1e-08
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 30/188 (15%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTC-IAPDYILCSRQVQAQILNQAKAVL-----D 54
PL + +I+ A + + AGQ C A I+ V L +
Sbjct: 212 PLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIG 271
Query: 55 SWYTEQ-----VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGD-------MDASDRFI 102
+ E + + R + Q L +ALGG+ + A F+
Sbjct: 272 APDAEPPFMGPLIIAAAAARYL--LAQQDL---------LALGGEPLLAMERLVAGTAFL 320
Query: 103 SPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQEL 162
SP I+ DV + EEIFGP+L + + EAI NA L+ L S + + E
Sbjct: 321 SPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFER 379
Query: 163 FIHQTHSG 170
F+ + +G
Sbjct: 380 FLARIRAG 387
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 3e-08
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 24 NAGQTCIAPDYILCSRQVQAQILNQAKA------VLDSWYTEQVQGSKHYCRIVSDKHFQ 77
N GQ C A +V + + +AKA V D + QG + + + F+
Sbjct: 334 NQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQ-----IDSEQFE 388
Query: 78 R----LKSLVHSSGTIALGGDMDASD-RFISPTILVDVKPTDPIMGEEIFGPILPIINVE 132
+ +KS V S T+ GGD S +I PT+ +V+ I +EIFGP+ I+ +
Sbjct: 389 KILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFK 448
Query: 133 SAFEAIQFINARPKPLTLYLFSSN 156
E I+ N L +F+ N
Sbjct: 449 DLDEVIRRANNTRYGLAAGVFTQN 472
|
Length = 538 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 3e-08
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 9/121 (7%)
Query: 70 IVSDKHFQRLKSLV---HSSGTIALGGDMDASDR------FISPTILVDVKPTDPIMGEE 120
+VS + + R+ + G + G ++ PT+ DV P I EE
Sbjct: 301 LVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREE 360
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP+L ++ E + N LT +++++ + +G + IN + H
Sbjct: 361 IFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRH 420
Query: 181 Y 181
+
Sbjct: 421 F 421
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 5e-08
Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 26/191 (13%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILN----------QA 49
P + + +++ AV + N GQ C A SR VQ I + +
Sbjct: 261 PNIVFADADLDYAVEQAHEALFFNMGQCCCAG-----SRTFVQESIYDEFVKRSVERAKK 315
Query: 50 KAVLDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSSGT-----IALGGDMDASDRFISP 104
+ V + + + QG + + ++ F+++ L+ S G FI P
Sbjct: 316 RVVGNPFDPKTEQGPQ-----IDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQP 370
Query: 105 TILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFI 164
T+ DV I EEIFGP+ I ++ E I+ N L +F+ + F
Sbjct: 371 TVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFS 430
Query: 165 HQTHSGSMCIN 175
+ +G++ +N
Sbjct: 431 NALRAGTVWVN 441
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 9e-08
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 70 IVSDKHFQRLKSLVH-----SSGTIALGGDMDASD-RFISPTILVDVKPTDPIMGEEIFG 123
++ +K F R+K + I GG D S F+ PT++ P +M EEIFG
Sbjct: 360 VIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFG 419
Query: 124 PIL 126
P+L
Sbjct: 420 PVL 422
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 1e-07
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-E 59
PL I ++++AV L G N G+ C+A + + + + + W +
Sbjct: 274 PLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGD 333
Query: 60 QVQGSKHYCRIVSDKHFQR-LKSLVH--SSGTIALGGDMDASDR--FISPTILVDVKPTD 114
V + F++ L + H G L G D+ +I PTI DV
Sbjct: 334 PFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDM 393
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFIN 142
I +EIFGP++ ++ ++ EAI+ N
Sbjct: 394 KIAQDEIFGPVMSLMKFKTVEEAIKKAN 421
|
Length = 501 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 2e-07
Identities = 50/197 (25%), Positives = 75/197 (38%), Gaps = 26/197 (13%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ------AKAVLD 54
P + S +++ A + + N GQ+CIA + V + A V D
Sbjct: 237 PFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGD 296
Query: 55 S---------WYTEQVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGD-MDASDRFISP 104
TEQ G + V D V + TI GG D F P
Sbjct: 297 PTDPDTDVGPLATEQ--GRDEVEKQVDDA--------VAAGATILCGGKRPDGPGWFYPP 346
Query: 105 TILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFI 164
T++ D+ P + EE+FGP+ + V EAI+ NA L ++ + QE FI
Sbjct: 347 TVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFI 406
Query: 165 HQTHSGSMCINDTVMHY 181
+G + IN + Y
Sbjct: 407 DDLEAGQVFINGMTVSY 423
|
Length = 457 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 2e-07
Identities = 25/76 (32%), Positives = 34/76 (44%)
Query: 101 FISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160
I PT+L V P + EE FGP+LPII V EAI+ N L +F+ +
Sbjct: 358 LIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKA 417
Query: 161 ELFIHQTHSGSMCIND 176
G++ IN
Sbjct: 418 RKLADALEVGTVNINS 433
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 5e-07
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 22 CINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYC-RIVSDKHFQR-- 78
C++AGQ C ++ R + + A A + S C ++S + R
Sbjct: 278 CMHAGQGCAITTRLVVPRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQ 337
Query: 79 --LKSLVHSSGTIALGGDMDASDR----FISPTILVDVKPTDPIMGEEIFGPILPIINVE 132
L V G A GG A DR F+ PT++ + + EEIFGP+L +I +
Sbjct: 338 SYLDLAVAEGGRFACGGGRPA-DRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHD 396
Query: 133 SAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
+A++ N P L+ +F ++ + + +G++ +N
Sbjct: 397 GDDDAVRIANDSPYGLSGTVFGADPERAAAVAARVRTGTVNVN 439
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 7e-07
Identities = 38/190 (20%), Positives = 73/190 (38%), Gaps = 21/190 (11%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDS----- 55
P+ + +++ A + NAGQ C++ + I V + + + A +
Sbjct: 231 PMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGA 290
Query: 56 ---WYTEQVQGSKHYCRIVSDKHFQRLKSLVH---SSGTIALGGDM---DASDRFISPTI 106
+ + GS ++S R+ + V + G L G D F PT+
Sbjct: 291 ALDYGPDM--GS-----LISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTV 343
Query: 107 LVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQ 166
L V + EE FGP++ I V EAI+ N L +++ + +
Sbjct: 344 LTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAAR 403
Query: 167 THSGSMCIND 176
+G++ +N+
Sbjct: 404 LRAGTVNVNE 413
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 8e-07
Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 10/164 (6%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQ---AQILNQAKAVLDSWY 57
P + +++ AV L K NAGQTC+ + + V A+ L QA + L
Sbjct: 261 PFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLH--I 318
Query: 58 TEQVQGSKHYCRIVSDKHFQRLKS----LVHSSGTIALGGDMDA-SDRFISPTILVDVKP 112
+ ++ ++ +K +++ + + GG F PTILVDV
Sbjct: 319 GDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPA 378
Query: 113 TDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
+ EE FGP+ P+ + + I N L Y ++ +
Sbjct: 379 NAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD 422
|
Length = 482 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 1e-06
Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 15/131 (11%)
Query: 23 INAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKH-----YCRIVSDKHFQ 77
NAGQ C A C Q I + A L + G ++S H
Sbjct: 274 YNAGQDCTAA----CRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRD 329
Query: 78 RLKSLV-----HSSGTIALGG-DMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINV 131
R+ V + GG D + PT+L + D I+ E+FGP++ +
Sbjct: 330 RVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPF 389
Query: 132 ESAFEAIQFIN 142
+ +A+++ N
Sbjct: 390 DDEDQAVRWAN 400
|
Length = 475 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 1e-06
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 70 IVSDKHFQRLKSLVHSS----GTIALGGDMDASDR--------FISPTILVDVKPTDPIM 117
++ +H ++ V ++ TI +GG+ + R ++ PT+ I
Sbjct: 320 LIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIA 379
Query: 118 GEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
EEIFGP+L +I + EAI+ N L Y+++++
Sbjct: 380 QEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTND 418
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 1e-06
Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 20/149 (13%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKA------VLDSWYTEQVQ 62
N + A+ G N GQ C A I + + + + K V + +
Sbjct: 258 NWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM 317
Query: 63 GSKHYCRIVSDKHFQRLKSLV----HSSGTIALGGDMDASDR-----FISPTILVDVKPT 113
G++ V+ ++ S V I GG + FI PT++V+V
Sbjct: 318 GAQ-----VNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTND 372
Query: 114 DPIMGEEIFGPILPIINVESAFEAIQFIN 142
+ EEIFGP+ +I ++ E I N
Sbjct: 373 MRVAQEEIFGPVATVIKFKTEDEVIDMAN 401
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 46.7 bits (110), Expect = 2e-06
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 15/179 (8%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILC---SRQVQAQILNQAKAVLDSWYTE------ 59
NI+ + L AGQ C+A ++ ++ + +++ +AKA+ + +E
Sbjct: 371 NIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADLG 430
Query: 60 ---QVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPI 116
Q + CR++ K L+ + G + FI PTIL V P
Sbjct: 431 PVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYE---KGNFIGPTILSGVTPDMEC 487
Query: 117 MGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
EEIFGP+L + S EAI IN +F+S+ F +G + IN
Sbjct: 488 YKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGIN 546
|
Length = 604 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 5e-06
Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 6/181 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P + + ++ELAV+ + G+ N GQ C A + + + + A +
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGD 299
Query: 61 VQGSKHY----CRI-VSDKHFQRLKSLVHSSGTIALGGDMDASD-RFISPTILVDVKPTD 114
+ ++ R + D+ ++++ + + LGG+ A + +PT+L +V P
Sbjct: 300 PRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEM 359
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
EE+FGP+ I + A A++ N L+ +F+++ + G + I
Sbjct: 360 TAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFI 419
Query: 175 N 175
N
Sbjct: 420 N 420
|
Length = 462 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 1e-05
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 101 FISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160
F PT+L V P + EE FGP++ + V EA++ N P L +++ +
Sbjct: 374 FYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARG 433
Query: 161 ELFIHQTHSGSMCIND 176
+ +G++ +N+
Sbjct: 434 RAIAARIRAGTVNVNE 449
|
Length = 524 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 2e-05
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 96 DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESA--FEAIQFINARPKPLTLYLF 153
D + F++P I+ V D + E+FGPIL +I ++ EAI+ INA LTL +
Sbjct: 385 DGNGYFVAPGIIEIVGIFD--LTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIH 442
Query: 154 SSNAQVQELFIHQTHSGSMCIN 175
S + + E + + +G++ IN
Sbjct: 443 SRDEREIEYWRERVEAGNLYIN 464
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-05
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 83 VHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFIN 142
V + G + GD A ++ PTI + + ++ EEIFGP I +S E I N
Sbjct: 348 VVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALAN 407
Query: 143 ARPKPLTLYLFSSN 156
P L +++ +
Sbjct: 408 DTPYGLAASVWTED 421
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-05
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 102 ISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINA 143
I P +L +V+P I EE FGP+LP+I + S E I NA
Sbjct: 373 IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNA 414
|
Length = 496 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-05
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 70 IVSDKHFQRLKSLV---HSSGTIAL--GGDMDASDRFISPTILVDVKPTDPIMGEEIFGP 124
IV +R++ LV + G G D+ + F PT+ +V P I EEIFGP
Sbjct: 331 IVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGP 390
Query: 125 ILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
+L ++ +A EA+ N P L ++S N
Sbjct: 391 VLVVLTFRTAKEAVALANNTPYGLAASVWSEN 422
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 8e-05
Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 20/134 (14%)
Query: 24 NAGQTCIAPDYILCSRQVQAQILNQAKA------VLDSWYTEQVQGSKHYCRIVSDKHFQ 77
N G+ C P L + + + +A V + E + G++ VS +
Sbjct: 278 NQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQ-----VSKDQLE 332
Query: 78 RLKSLV----HSSGTIALGGDM-----DASDRFISPTILVDVKPTDPIMGEEIFGPILPI 128
++ S V + GG+ F PT++ I EEIFGP+L +
Sbjct: 333 KILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAV 392
Query: 129 INVESAFEAIQFIN 142
I + EAI N
Sbjct: 393 ITFKDEEEAIAIAN 406
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 1e-04
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 82 LVHSSGTIALGGDMDASDRFISPTILVDVKP-TDPIMGEEIFGPILPIINVESAFEAIQF 140
L+ + + LGG F PT+L+ P + E FGP+ EA +
Sbjct: 350 LLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARL 409
Query: 141 INARPKPLTLYLFSSNAQVQELFI 164
L L +S+ + FI
Sbjct: 410 AARGGGSLVATLATSDPEEARQFI 433
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 2e-04
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSW-YTE 59
PL + +++ A + G N+GQ C A +L V + +W Y +
Sbjct: 252 PLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGD 311
Query: 60 QVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDA----SDRFISPTILVDVKPTDP 115
+ S ++ + ++ V+ + IA G + +PT+L V P+
Sbjct: 312 PMDPSVDMGTVIDEAAAILFEARVNEA--IAQGARLLLGNVRDGALYAPTVLDRVDPSMT 369
Query: 116 IMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155
++ EE FGP+ P+I +AI+ N+ T Y SS
Sbjct: 370 LVREETFGPVSPVIRFCDIDDAIRISNS-----TAYGLSS 404
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 2e-04
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 24 NAGQTCIAPDYILCSRQVQAQI---LNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80
NAGQ C A I R + + L A A L S + S + S H +R+
Sbjct: 274 NAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDD--ESTELGPLSSLAHLERVM 331
Query: 81 SLVHSSG-----TIALGGD-MDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESA 134
V + + GG+ + + +PT+L K D I+ +E+FGP++ I + +
Sbjct: 332 KAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDE 391
Query: 135 FEAIQFINA 143
+ + + N
Sbjct: 392 EQVVNWAND 400
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 4e-04
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 87 GTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPK 146
G L A+ F++PT+ D I+ EEIFGP++ ++ + E I N
Sbjct: 352 GGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEY 411
Query: 147 PLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
L +F+++ IHQ +G IN
Sbjct: 412 GLAAGVFTADLSRAHRVIHQLEAGICWIN 440
|
Length = 488 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.001
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 14/138 (10%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQ----AQILNQAKAV---- 52
PL I + +++ AVR + N G+ CIA + + +++ + K +
Sbjct: 263 PLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGD 322
Query: 53 -LDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGG-DMDASDRFISPTILVDV 110
LD Q K + DK + + V T+ GG +D F PT+ DV
Sbjct: 323 PLDRSTDHGPQNHKAHL----DKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDV 378
Query: 111 KPTDPIMGEEIFGPILPI 128
+ I EE FGPI+ I
Sbjct: 379 EDHMFIAKEESFGPIMII 396
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.001
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 31/189 (16%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLD------ 54
PL +D +I+ AV + I+AGQ C C+R++ Q A L
Sbjct: 247 PLIVDEVADIDAAVHLIIQSAFISAGQRCT------CARRLLVPDGAQGDAFLARLVEVA 300
Query: 55 -----SWYTEQVQ---GSKHYCRIVSDKHFQRL----KSLVHSSGTIALGGD-MDASDRF 101
+ + Q G+ ++S + QRL L+ G L +D
Sbjct: 301 ERLTVGAWDAEPQPFMGA-----VISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAAL 355
Query: 102 ISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQE 161
++P I +DV + EE FGP+L +I + EAI N L+ L S + ++ +
Sbjct: 356 LTPGI-IDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYD 414
Query: 162 LFIHQTHSG 170
F+ + +G
Sbjct: 415 RFLLEIRAG 423
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 37.0 bits (86), Expect = 0.004
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 83 VHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFIN 142
V + + GG SD +PT+L+D + +EIFGP++ + + + EAI N
Sbjct: 324 VAAGARLLCGGKR-LSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQAN 382
Query: 143 ARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIND 176
+ P +F+ + V + + + ++ +ND
Sbjct: 383 SLPVAFQAAVFTKDLDVALKAVRRLDATAVMVND 416
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 181 | |||
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| KOG2450|consensus | 501 | 100.0 | ||
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| KOG2451|consensus | 503 | 100.0 | ||
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| KOG2456|consensus | 477 | 100.0 | ||
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| KOG2454|consensus | 583 | 100.0 | ||
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| KOG2455|consensus | 561 | 100.0 | ||
| KOG2452|consensus | 881 | 100.0 | ||
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 99.97 | |
| KOG2453|consensus | 507 | 99.97 | ||
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 99.97 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 99.96 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 99.96 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 99.95 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.72 | |
| KOG2449|consensus | 157 | 99.53 | ||
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.5 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 99.24 | |
| KOG4165|consensus | 433 | 98.95 | ||
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 98.17 | |
| KOG2450|consensus | 501 | 87.32 |
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-47 Score=317.33 Aligned_cols=178 Identities=20% Similarity=0.343 Sum_probs=169.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+| ++.+++||++++.+++++
T Consensus 261 p~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v 340 (482)
T PRK11241 261 PFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKV 340 (482)
T ss_pred eEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||..++ .++|+.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 341 ~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft 420 (482)
T PRK11241 341 EEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA 420 (482)
T ss_pred HHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEc
Confidence 99987 5999999997532 589999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.++++++++|.||||++.
T Consensus 421 ~d~~~a~~~~~~l~~G~v~iN~~~ 444 (482)
T PRK11241 421 RDLSRVFRVGEALEYGIVGINTGI 444 (482)
T ss_pred CCHHHHHHHHHHcCccEEEECCCC
Confidence 999999999999999999999864
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-47 Score=316.21 Aligned_cols=180 Identities=39% Similarity=0.738 Sum_probs=171.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhc-hhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKC-INAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~-~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++| .|+||.|++++|+|||+++||+|+++|++++++++.|+|.+++++||++++.+++++
T Consensus 224 p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v 303 (484)
T PLN02174 224 PVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRL 303 (484)
T ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHH
Confidence 7899999999999999999999 699999999999999999999999999999999999999778899999999999999
Q ss_pred HHHHh---cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCc
Q psy11681 80 KSLVH---SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156 (181)
Q Consensus 80 ~~~~~---~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d 156 (181)
.++++ +|+++++||..+..+++++||++.++++++++++||+||||++|++|+|.+||++++|+++|||++||||+|
T Consensus 304 ~~~i~~a~~ga~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d 383 (484)
T PLN02174 304 SKLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHN 383 (484)
T ss_pred HHHHHHHHcCCEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCC
Confidence 99997 578999999755468899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCcccc
Q psy11681 157 AQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 157 ~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
.+++.+++.++++|.|+||++..+
T Consensus 384 ~~~a~~~~~~l~aG~v~IN~~~~~ 407 (484)
T PLN02174 384 KKLKERFAATVSAGGIVVNDIAVH 407 (484)
T ss_pred HHHHHHHHHcCCcceEEECCCcCC
Confidence 999999999999999999987654
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-46 Score=311.24 Aligned_cols=176 Identities=25% Similarity=0.430 Sum_probs=167.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhc-ccccC-CCCCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDS-WYTEQ-VQGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~-~~~g~-~~~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++ +++|| .++.+++||++++.++++
T Consensus 248 p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~ 326 (472)
T COG1012 248 PAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDR 326 (472)
T ss_pred CeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999 65 88999 578999999999999999
Q ss_pred HHHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 79 LKSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
+.++++ +|++++.||.... |+|++|||+.+++++|++++||+||||++|++|+|.|||++++|+++|||+++|||
T Consensus 327 v~~~i~~a~~~G~~~~~Gg~~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t 405 (472)
T COG1012 327 VEGYIEDAVAEGARLLAGGKRPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFT 405 (472)
T ss_pred HHHHHHHHHHcCCEEEeCCcCCC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEc
Confidence 999987 6889999887333 89999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|..++.+++.++++|+|+||++.
T Consensus 406 ~d~~~~~~~~~~l~aG~v~iN~~~ 429 (472)
T COG1012 406 RDLARAFRVARRLEAGMVGINDYT 429 (472)
T ss_pred CCHHHHHHHHhcCCeeEEEECCCC
Confidence 999999999999999999999874
|
|
| >KOG2450|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-46 Score=304.39 Aligned_cols=179 Identities=20% Similarity=0.345 Sum_probs=171.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhc-ccccCC-CCCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDS-WYTEQV-QGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~-~~~g~~-~~~~~~g~l~~~~~~~~ 78 (181)
|.||++|||++.|++.++.+.|+|+||+|++.+|+|||+++||+|+++++++..+ +++||| ++.+.+||.++..+++|
T Consensus 274 p~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ek 353 (501)
T KOG2450|consen 274 PIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEK 353 (501)
T ss_pred cceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999966 999998 67999999999999999
Q ss_pred HHHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 79 LKSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
+++|++ +|+++++||.. .+.|+|+.||++.++.++|++.+||+||||+.|.+|++.||+|+++|++.|||+++||
T Consensus 354 I~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~ 433 (501)
T KOG2450|consen 354 ILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVF 433 (501)
T ss_pred HHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEe
Confidence 999997 69999999964 4579999999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|..++.+++..+++|+||||++..
T Consensus 434 t~dl~~a~~va~~l~aGtVwiN~y~~ 459 (501)
T KOG2450|consen 434 TKDLDKAHRVANALQAGTVWINCYNV 459 (501)
T ss_pred ccChHHHHHHHHHhcCceEEEecccc
Confidence 99999999999999999999999864
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=311.02 Aligned_cols=178 Identities=21% Similarity=0.383 Sum_probs=169.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|++++.++++|+| ++.+++||+++..+++++
T Consensus 274 p~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v 353 (501)
T PLN02766 274 PLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKI 353 (501)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 354 ~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft 433 (501)
T PLN02766 354 LSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVT 433 (501)
T ss_pred HHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99886 589999999753 4688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.+++.++++|+|+||++.
T Consensus 434 ~d~~~a~~~~~~l~~G~v~iN~~~ 457 (501)
T PLN02766 434 KDLDVANTVSRSIRAGTIWVNCYF 457 (501)
T ss_pred CCHHHHHHHHHhCCcceEEECCCC
Confidence 999999999999999999999854
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=308.01 Aligned_cols=179 Identities=20% Similarity=0.343 Sum_probs=170.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+| ++.+++||++++.+++++
T Consensus 233 ~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v 312 (448)
T TIGR01780 233 PFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKV 312 (448)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||..+ ..++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 313 ~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs 392 (448)
T TIGR01780 313 EKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFS 392 (448)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEEC
Confidence 99886 599999999654 3588999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+++.+++.++++|.|+||++..
T Consensus 393 ~d~~~~~~~~~~l~~G~v~iN~~~~ 417 (448)
T TIGR01780 393 RDLATIWRVAEALEYGMVGINTGLI 417 (448)
T ss_pred CCHHHHHHHHHhCCccEEEECCCCC
Confidence 9999999999999999999998643
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-45 Score=307.16 Aligned_cols=179 Identities=20% Similarity=0.324 Sum_probs=169.3
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++|+|||++++|+|+++|++++.++++|+| ++.+.+||+++..+++++
T Consensus 251 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v 330 (472)
T TIGR03374 251 PVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERV 330 (472)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568899999999999999
Q ss_pred HHHHh----cC-ceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SS-GTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~g-a~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +| +++++||...+ .++|+.||++.++++++++++||+||||++|++|+|.+||++++|.++|||++|||
T Consensus 331 ~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vf 410 (472)
T TIGR03374 331 MKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVW 410 (472)
T ss_pred HHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence 98886 46 79999986533 57899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|..++.+++.++++|.|+||+...
T Consensus 411 t~d~~~~~~~~~~l~~G~v~iN~~~~ 436 (472)
T TIGR03374 411 TKDVGRAHRLSARLQYGCTWVNTHFM 436 (472)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCC
Confidence 99999999999999999999998653
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-45 Score=301.80 Aligned_cols=180 Identities=24% Similarity=0.403 Sum_probs=170.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-C-CccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-G-SKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~-~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|++++..++.|||. + .+++||++++.++++
T Consensus 186 p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~ 265 (409)
T PRK10090 186 PAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALER 265 (409)
T ss_pred eEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 4 789999999999999
Q ss_pred HHHHHh----cCceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 79 LKSLVH----SSGTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
+.++++ +|+++++||..++ .++|++||++.++++++++++||+||||++|++|+|.+||++++|++++||+++||
T Consensus 266 ~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vf 345 (409)
T PRK10090 266 VEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIY 345 (409)
T ss_pred HHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence 999987 5999999997543 57899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|+|.+.+.+++.++++|.|+||++..+
T Consensus 346 t~d~~~~~~~~~~l~~G~v~iN~~~~~ 372 (409)
T PRK10090 346 TQNLNVAMKAIKGLKFGETYINRENFE 372 (409)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCC
Confidence 999999999999999999999987654
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-45 Score=307.72 Aligned_cols=179 Identities=23% Similarity=0.389 Sum_probs=169.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||+++||+|+++|++++.+++.|+| ++.+++||++++.+++++
T Consensus 275 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v 354 (498)
T PLN02278 275 PFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKV 354 (498)
T ss_pred eeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999998 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..++|+.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 355 ~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft 434 (498)
T PLN02278 355 ESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFT 434 (498)
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEc
Confidence 99886 699999999653 3588999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+++.++++++++|.|+||+...
T Consensus 435 ~d~~~~~~~~~~l~~G~v~iN~~~~ 459 (498)
T PLN02278 435 RDLQRAWRVSEALEYGIVGVNEGLI 459 (498)
T ss_pred CCHHHHHHHHHhCCcCeEEECCCCC
Confidence 9999999999999999999998654
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-45 Score=309.46 Aligned_cols=177 Identities=23% Similarity=0.287 Sum_probs=168.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|+|++|||||++ +|+|+++|++++.+++.|+| ++.+++||+++..+++++
T Consensus 363 p~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v 441 (604)
T PLN02419 363 HGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERI 441 (604)
T ss_pred eEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999 99999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||... ..|+|++|||+.++++++.+++||+||||++|++|+|.+||++++|+++|||++
T Consensus 442 ~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaa 521 (604)
T PLN02419 442 CRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGA 521 (604)
T ss_pred HHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEE
Confidence 99986 599999998642 358999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|||+|.+++.+++.++++|.|+||+..
T Consensus 522 sVfT~d~~~a~~~a~~l~aG~V~IN~~~ 549 (604)
T PLN02419 522 AIFTSSGAAARKFQMDIEAGQIGINVPI 549 (604)
T ss_pred EEECCCHHHHHHHHHhCCeeeEEEcCCC
Confidence 9999999999999999999999999863
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-45 Score=305.42 Aligned_cols=178 Identities=21% Similarity=0.304 Sum_probs=169.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+|. +.+++||+++..+++++
T Consensus 263 ~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v 342 (486)
T cd07140 263 PLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKL 342 (486)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 58999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeC--CHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVE--SAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|+++++||.. +..++|++||++.++++++++++||+||||++|++|+ |.+||++++|+++|||++||
T Consensus 343 ~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~v 422 (486)
T cd07140 343 VEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGV 422 (486)
T ss_pred HHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEE
Confidence 99986 69999999964 4467899999999999999999999999999999998 69999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|.+++.+++.++++|.|+||++.
T Consensus 423 ft~d~~~a~~~~~~l~~G~v~iN~~~ 448 (486)
T cd07140 423 FTKDINKALYVSDKLEAGTVFVNTYN 448 (486)
T ss_pred ECCCHHHHHHHHHhCCcceEEECCCC
Confidence 99999999999999999999999854
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-45 Score=306.00 Aligned_cols=180 Identities=42% Similarity=0.851 Sum_probs=171.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.|+||.|+|++++|||++++|+|+++|++.+.+++.+++.+++++||+++..+++++.
T Consensus 221 p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~ 300 (493)
T PTZ00381 221 PVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLA 300 (493)
T ss_pred ceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999998766667889999999999999999
Q ss_pred HHHh-cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHH
Q psy11681 81 SLVH-SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQV 159 (181)
Q Consensus 81 ~~~~-~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~ 159 (181)
++++ +|+++++||..+..++++.||++.++++++++++||+||||++|++|+|.+||++++|++++||++||||+|.+.
T Consensus 301 ~~i~~~ga~~~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~ 380 (493)
T PTZ00381 301 ELIKDHGGKVVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRH 380 (493)
T ss_pred HHHHhCCCcEEECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 9996 689999999766668899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCcccc
Q psy11681 160 QELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 160 ~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+.+++.++++|.|+||+...|
T Consensus 381 ~~~~~~~~~sG~v~IN~~~~~ 401 (493)
T PTZ00381 381 KELVLENTSSGAVVINDCVFH 401 (493)
T ss_pred HHHHHHhCCcceEEECCcccc
Confidence 999999999999999987654
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-45 Score=305.28 Aligned_cols=179 Identities=23% Similarity=0.403 Sum_probs=169.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|+|+||.|++++++|||+++||+|+++|++++.+++.|+| ++.+.+||++++.+++++
T Consensus 256 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 335 (477)
T cd07113 256 AAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKV 335 (477)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 468899999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..++|+.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 336 ~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t 415 (477)
T cd07113 336 CSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWT 415 (477)
T ss_pred HHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99987 599999998643 3588999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+++.+++.++++|+|+||++..
T Consensus 416 ~d~~~~~~~~~~l~~G~v~iN~~~~ 440 (477)
T cd07113 416 NNLSKALRYIPRIEAGTVWVNMHTF 440 (477)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCC
Confidence 9999999999999999999998643
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-45 Score=302.88 Aligned_cols=179 Identities=22% Similarity=0.366 Sum_probs=170.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.+++.|+| ++.+.+||++++.+++++
T Consensus 227 p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i 306 (446)
T cd07106 227 AAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKV 306 (446)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||...+ .++++.||++.++++++.+++||+||||++|++|+|.+||++++|++++||+++|||
T Consensus 307 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 386 (446)
T cd07106 307 KELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWS 386 (446)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99886 5899999997543 578999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+++.+++.++++|+|+||++..
T Consensus 387 ~d~~~~~~~~~~~~~G~v~iN~~~~ 411 (446)
T cd07106 387 SDLERAEAVARRLEAGTVWINTHGA 411 (446)
T ss_pred CCHHHHHHHHHhCCccEEEECCCCC
Confidence 9999999999999999999998753
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=302.68 Aligned_cols=178 Identities=21% Similarity=0.344 Sum_probs=169.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|++++.++++|+| ++.+.+||+++..+++++
T Consensus 240 p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~ 319 (462)
T PRK13968 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDEL 319 (462)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 458899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||.... .++|+.||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t 399 (462)
T PRK13968 320 HHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFT 399 (462)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEc
Confidence 88886 6999999986533 478999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.+++.++++|+|+||+..
T Consensus 400 ~d~~~a~~~~~~l~~G~v~iN~~~ 423 (462)
T PRK13968 400 TDETQARQMAARLECGGVFINGYC 423 (462)
T ss_pred CCHHHHHHHHHhCCcceEEECCCC
Confidence 999999999999999999999864
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-45 Score=305.01 Aligned_cols=178 Identities=19% Similarity=0.310 Sum_probs=169.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.++||.|+++++||||+++||+|+++|++++.++++|+| ++.+.+||++++.+++++
T Consensus 261 ~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~ 340 (481)
T cd07141 261 PNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKI 340 (481)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 467999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..++++.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 341 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft 420 (481)
T cd07141 341 LELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFT 420 (481)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEEC
Confidence 99887 589999999753 4688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.+++.++++|+|+||++.
T Consensus 421 ~d~~~a~~~~~~l~~G~v~iN~~~ 444 (481)
T cd07141 421 KDIDKAITFSNALRAGTVWVNCYN 444 (481)
T ss_pred CCHHHHHHHHHhcCcCeEEECCCC
Confidence 999999999999999999999864
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=304.30 Aligned_cols=179 Identities=18% Similarity=0.320 Sum_probs=169.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.+++.|+| ++.+++||++++.+++++
T Consensus 252 p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v 331 (475)
T PRK13473 252 PVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRV 331 (475)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cC-ceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SS-GTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~g-a~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +| +++++||... ..+.+++||++.++++++.+++||+||||++|++|+|.+||++++|++++||+++||
T Consensus 332 ~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~ 411 (475)
T PRK13473 332 AGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVW 411 (475)
T ss_pred HHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEE
Confidence 99887 46 8999999754 357899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|..++.+++.++++|+|+||++..
T Consensus 412 t~d~~~~~~~~~~l~~G~v~iN~~~~ 437 (475)
T PRK13473 412 TRDVGRAHRVSARLQYGCTWVNTHFM 437 (475)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCC
Confidence 99999999999999999999998654
|
|
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=303.76 Aligned_cols=180 Identities=21% Similarity=0.338 Sum_probs=170.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|. +.+.+||++++.+++++
T Consensus 251 p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 330 (478)
T cd07086 251 AIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKY 330 (478)
T ss_pred cEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 57899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC---CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDMDA---SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~---~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|+++++||.... .+++++||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|
T Consensus 331 ~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v 410 (478)
T cd07086 331 LNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSI 410 (478)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEE
Confidence 99986 6999999997543 4789999999999999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhh--cceeeEEECCcccc
Q psy11681 153 FSSNAQVQELFIHQ--THSGSMCINDTVMH 180 (181)
Q Consensus 153 ~s~d~~~~~~~~~~--~~~g~v~iN~~~~~ 180 (181)
||+|.+++.+++.+ +++|+|+||+++.+
T Consensus 411 ~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~ 440 (478)
T cd07086 411 FTEDLREAFRWLGPKGSDCGIVNVNIPTSG 440 (478)
T ss_pred EcCCHHHHHHHHhcCcccceeEEECCCCCC
Confidence 99999999999999 99999999987543
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=302.34 Aligned_cols=180 Identities=25% Similarity=0.433 Sum_probs=170.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|++++.+++.|+| ++.+++||++++.+++++
T Consensus 232 p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~ 311 (453)
T cd07099 232 PMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIV 311 (453)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..+.+++||++.++++++.+++||+||||++|++|+|.+||++++|++++||+++|||
T Consensus 312 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 391 (453)
T cd07099 312 RRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFS 391 (453)
T ss_pred HHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEc
Confidence 99876 699999998754 4688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+|.+++.+++.++++|+|+||+...+
T Consensus 392 ~d~~~~~~~~~~l~~G~v~iN~~~~~ 417 (453)
T cd07099 392 RDLARAEAIARRLEAGAVSINDVLLT 417 (453)
T ss_pred CCHHHHHHHHHhCCeeeEEECCCCCC
Confidence 99999999999999999999987543
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=304.09 Aligned_cols=179 Identities=21% Similarity=0.338 Sum_probs=169.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|++++.+++.|+| ++.+++||++++.+++++
T Consensus 255 ~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 334 (481)
T TIGR03216 255 AAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKV 334 (481)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 458999999999999999
Q ss_pred HHHHh----cCceeeeCCccC------CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCce
Q psy11681 80 KSLVH----SSGTIALGGDMD------ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLT 149 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~------~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 149 (181)
.++++ +|+++++||..+ ..++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+
T Consensus 335 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~ 414 (481)
T TIGR03216 335 LSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLA 414 (481)
T ss_pred HHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccce
Confidence 98886 699999998642 35899999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 150 LYLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 150 ~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
++|||+|.+++.+++.++++|.|+||++..
T Consensus 415 ~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~ 444 (481)
T TIGR03216 415 ASVWTEDLSRAHRVARQMEVGIVWVNSWFL 444 (481)
T ss_pred EEEECCCHHHHHHHHHhcCccEEEECCCCC
Confidence 999999999999999999999999998654
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=302.08 Aligned_cols=179 Identities=20% Similarity=0.314 Sum_probs=169.3
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|++++..++.|+| ++.+++||++++.+++++
T Consensus 231 p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v 310 (454)
T cd07101 231 PMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRV 310 (454)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999988 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccC--CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSGTIALGGDMD--ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~--~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +|+++++||... ..++|+.||++.++++++.+++||+||||++|++|+|.+||++++|++++||+++||
T Consensus 311 ~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 390 (454)
T cd07101 311 TAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVW 390 (454)
T ss_pred HHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEE
Confidence 99887 689999998642 247899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|.+++.+++.++++|+|+||++..
T Consensus 391 t~d~~~a~~~~~~l~~G~v~iN~~~~ 416 (454)
T cd07101 391 TRDGARGRRIAARLRAGTVNVNEGYA 416 (454)
T ss_pred cCCHHHHHHHHHhcCcceEEECCCCC
Confidence 99999999999999999999998754
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=302.46 Aligned_cols=180 Identities=19% Similarity=0.320 Sum_probs=169.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHh-chhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGK-CINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~-~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++ |.++||.|+|++|||||+++||+|+++|++++.+++.|+| ++.+++||++++.++++
T Consensus 230 p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~ 309 (456)
T cd07107 230 ALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDR 309 (456)
T ss_pred eEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHH
Confidence 789999999999999999995 8899999999999999999999999999999999999999 46889999999999999
Q ss_pred HHHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCce
Q psy11681 79 LKSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLT 149 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 149 (181)
+.++++ +|+++++||... ..+++++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+
T Consensus 310 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~ 389 (456)
T cd07107 310 VMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLT 389 (456)
T ss_pred HHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcce
Confidence 999886 699999999642 25889999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 150 LYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 150 ~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
++|||+|.+++.+++.++++|+|+||++..+
T Consensus 390 a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~ 420 (456)
T cd07107 390 AAIWTNDISQAHRTARRVEAGYVWINGSSRH 420 (456)
T ss_pred EEEECCCHHHHHHHHHhcCcCEEEECCCCCC
Confidence 9999999999999999999999999987643
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=303.34 Aligned_cols=178 Identities=22% Similarity=0.335 Sum_probs=169.3
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+| ++.+++||++++.+.+++
T Consensus 250 p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v 329 (478)
T cd07085 250 HAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERI 329 (478)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||... ..++|+.|||+.++++++.+++||+||||++|++|+|.+||++++|+++|||++
T Consensus 330 ~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a 409 (478)
T cd07085 330 EGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGA 409 (478)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceE
Confidence 99886 699999998642 358899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|||+|.+++.+++.++++|+|+||++.
T Consensus 410 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~ 437 (478)
T cd07085 410 AIFTRSGAAARKFQREVDAGMVGINVPI 437 (478)
T ss_pred EEECCCHHHHHHHHHhCCcceEEEcCCC
Confidence 9999999999999999999999999864
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=305.16 Aligned_cols=180 Identities=21% Similarity=0.355 Sum_probs=167.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|++++.++++|+|. +.+++||+++..+++++
T Consensus 290 ~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v 369 (522)
T cd07123 290 FHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRI 369 (522)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999994 58899999999999999
Q ss_pred HHHHh----c-CceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCC--HHHHHHHHhcC-CCCceE
Q psy11681 80 KSLVH----S-SGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVES--AFEAIQFINAR-PKPLTL 150 (181)
Q Consensus 80 ~~~~~----~-ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~-~~gl~~ 150 (181)
.++++ + |+++++||..+ ..|+|++|||+.++++++++++||+||||++|++|++ .+|+++++|++ +|||++
T Consensus 370 ~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a 449 (522)
T cd07123 370 KGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTG 449 (522)
T ss_pred HHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceE
Confidence 99887 4 89999998653 3578999999999999999999999999999999994 79999999998 499999
Q ss_pred EEeeCcHHHHHHHHhhc--ceeeEEECCcccc
Q psy11681 151 YLFSSNAQVQELFIHQT--HSGSMCINDTVMH 180 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~--~~g~v~iN~~~~~ 180 (181)
||||+|.+++.+++.++ ++|+|+||+...+
T Consensus 450 ~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~ 481 (522)
T cd07123 450 AIFAQDRKAIREATDALRNAAGNFYINDKPTG 481 (522)
T ss_pred EEEeCCHHHHHHHHHhhhhcCcEEEECCCCCC
Confidence 99999999999999986 5999999987543
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=301.06 Aligned_cols=179 Identities=22% Similarity=0.364 Sum_probs=169.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++.++++|+| ++.+++||++++.+.+++
T Consensus 237 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~ 316 (457)
T PRK09406 237 PFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEV 316 (457)
T ss_pred eeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 468899999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..|+|++||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 317 ~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 396 (457)
T PRK09406 317 EKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWT 396 (457)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEc
Confidence 98885 699999999753 3688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+++.+++.++++|+|+||+++.
T Consensus 397 ~d~~~~~~~~~~l~~G~v~iN~~~~ 421 (457)
T PRK09406 397 RDEAEQERFIDDLEAGQVFINGMTV 421 (457)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCC
Confidence 9999999999999999999998653
|
|
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=302.23 Aligned_cols=176 Identities=20% Similarity=0.314 Sum_probs=168.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|++++..++.|+| ++.+.+||+++..+++++
T Consensus 252 p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 331 (472)
T TIGR03250 252 PLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILF 331 (472)
T ss_pred eEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .|+|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+
T Consensus 332 ~~~i~~a~~~Ga~vl~gg~~--~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~ 409 (472)
T TIGR03250 332 EARVNEAIAQGARLLLGNVR--DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTN 409 (472)
T ss_pred HHHHHHHHHCCCEEEECCCc--CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcC
Confidence 88875 69999999864 5889999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|.+++.+++.++++|+|+||+.+
T Consensus 410 d~~~~~~~~~~l~~G~v~iN~~~ 432 (472)
T TIGR03250 410 RLDYITRFIAELQVGTVNVWEVP 432 (472)
T ss_pred CHHHHHHHHHHCCcceEEEcCCC
Confidence 99999999999999999999765
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=299.20 Aligned_cols=179 Identities=26% Similarity=0.421 Sum_probs=169.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.+++.|+| ++.+++||++++.+++++
T Consensus 210 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 289 (429)
T cd07100 210 PFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDEL 289 (429)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..+++++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 290 ~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 369 (429)
T cd07100 290 HEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFT 369 (429)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEEC
Confidence 99886 699999998653 3578999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+++.+++.++++|+|+||++..
T Consensus 370 ~d~~~~~~~~~~l~~g~v~iN~~~~ 394 (429)
T cd07100 370 TDLERAERVARRLEAGMVFINGMVK 394 (429)
T ss_pred CCHHHHHHHHHhCCcCeEEECCCCC
Confidence 9999999999999999999998763
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=301.93 Aligned_cols=178 Identities=21% Similarity=0.288 Sum_probs=169.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|++++.++++|+| ++.+.+||++++.+++++
T Consensus 250 p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v 329 (475)
T cd07117 250 ANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKI 329 (475)
T ss_pred eEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||... ..++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||++
T Consensus 330 ~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~ 409 (475)
T cd07117 330 LSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGG 409 (475)
T ss_pred HHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceE
Confidence 98887 599999998643 258899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|||+|.+++.+++.++++|+|+||++.
T Consensus 410 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~ 437 (475)
T cd07117 410 GVFTKDINRALRVARAVETGRVWVNTYN 437 (475)
T ss_pred EEECCCHHHHHHHHHhCCcceEEECCCC
Confidence 9999999999999999999999999854
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=299.02 Aligned_cols=179 Identities=42% Similarity=0.759 Sum_probs=169.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhc-hhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKC-INAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~-~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++| +|+||.|++++|+|||++++|+|+++|++++..++.|||.+.+++||++++.+++++
T Consensus 213 p~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v 292 (432)
T cd07137 213 PVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRL 292 (432)
T ss_pred cEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHH
Confidence 7899999999999999999999 599999999999999999999999999999999999999778899999999999999
Q ss_pred HHHHh---cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCc
Q psy11681 80 KSLVH---SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156 (181)
Q Consensus 80 ~~~~~---~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d 156 (181)
.++++ .|+++++||..+..++|+.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+|
T Consensus 293 ~~~i~~a~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d 372 (432)
T cd07137 293 SRLLDDPSVADKIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKN 372 (432)
T ss_pred HHHHHHHHhCCeEEeCCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCC
Confidence 99987 378999998655568999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCccc
Q psy11681 157 AQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 157 ~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
.+++.+++.++++|.|+||++..
T Consensus 373 ~~~a~~~~~~l~~G~v~iN~~~~ 395 (432)
T cd07137 373 KELKRRIVAETSSGGVTFNDTVV 395 (432)
T ss_pred HHHHHHHHHhCCcCcEEECCccc
Confidence 99999999999999999998654
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-44 Score=301.92 Aligned_cols=180 Identities=18% Similarity=0.328 Sum_probs=170.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|++++.++++|+| ++.+.+||++++.+++++
T Consensus 250 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v 329 (473)
T cd07097 250 PLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKD 329 (473)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccC---CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDMD---ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~---~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|+++++||... ..+.+++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|
T Consensus 330 ~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v 409 (473)
T cd07097 330 LRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGI 409 (473)
T ss_pred HHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEE
Confidence 99887 599999998643 24789999999999999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
||+|.+++.+++.++++|+|+||+++.+
T Consensus 410 ~t~d~~~a~~~~~~l~~g~v~iN~~~~~ 437 (473)
T cd07097 410 VTTSLKHATHFKRRVEAGVVMVNLPTAG 437 (473)
T ss_pred ECCCHHHHHHHHHhCCcCeEEECCCCCC
Confidence 9999999999999999999999986543
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-44 Score=303.96 Aligned_cols=178 Identities=21% Similarity=0.316 Sum_probs=169.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||+++||+|+++|+++..+++.|+| ++.+.+||+++..+++++
T Consensus 311 p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v 390 (538)
T PLN02466 311 PFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKI 390 (538)
T ss_pred eEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..+.++.|||+.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 391 ~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT 470 (538)
T PLN02466 391 LRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFT 470 (538)
T ss_pred HHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEc
Confidence 98876 699999998753 3578999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.+++.++++|+|+||++.
T Consensus 471 ~d~~~a~~~~~~l~aG~v~IN~~~ 494 (538)
T PLN02466 471 QNLDTANTLSRALRVGTVWVNCFD 494 (538)
T ss_pred CCHHHHHHHHHhCCeeeEEECCCC
Confidence 999999999999999999999854
|
|
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-44 Score=299.32 Aligned_cols=178 Identities=24% Similarity=0.415 Sum_probs=169.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||+++||+|+++|++++.+++.|+| ++.+.+||++++.+.+++
T Consensus 225 ~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 304 (443)
T cd07152 225 ALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRV 304 (443)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .+++++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+
T Consensus 305 ~~~i~~a~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~ 382 (443)
T cd07152 305 HAIVDDSVAAGARLEAGGTY--DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISR 382 (443)
T ss_pred HHHHHHHHhCCCEEEeccCc--CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECC
Confidence 99886 59999999864 4789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|.+++.+++.++++|+|+||++..+
T Consensus 383 d~~~a~~~~~~l~~G~v~iN~~~~~ 407 (443)
T cd07152 383 DVGRAMALADRLRTGMLHINDQTVN 407 (443)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCC
Confidence 9999999999999999999987653
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-44 Score=299.42 Aligned_cols=177 Identities=19% Similarity=0.360 Sum_probs=168.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|+++||.|+++++||||+++||+|+++|++++.++++|+| ++.+++||+++..+++++
T Consensus 237 p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 316 (455)
T cd07148 237 PVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRV 316 (455)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 468899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||... .+.++.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+
T Consensus 317 ~~~i~~a~~~Ga~vl~gg~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~ 395 (455)
T cd07148 317 EEWVNEAVAAGARLLCGGKRL-SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTK 395 (455)
T ss_pred HHHHHHHHhCCCEEEeCCccC-CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcC
Confidence 99986 699999998654 3678999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|.+++.+++.++++|+|+||++.
T Consensus 396 d~~~~~~~~~~~~~g~v~iN~~~ 418 (455)
T cd07148 396 DLDVALKAVRRLDATAVMVNDHT 418 (455)
T ss_pred CHHHHHHHHHHcCcCeEEECCCC
Confidence 99999999999999999999875
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-44 Score=298.35 Aligned_cols=179 Identities=54% Similarity=1.001 Sum_probs=170.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++.+.+++.|+|++.+++||+++..+++++.
T Consensus 212 p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~ 291 (443)
T cd07132 212 PCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLK 291 (443)
T ss_pred ceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
++++ ++++++||..+..+.++.||++.++++++++++||+||||++|++|+|.+||++++|++++||+++|||+|.+.+
T Consensus 292 ~~i~-~a~~~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~ 370 (443)
T cd07132 292 KLLS-GGKVAIGGQTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVI 370 (443)
T ss_pred HHHh-CCEEEeCCccCCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHH
Confidence 9998 569999987655688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCcccc
Q psy11681 161 ELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~~ 180 (181)
.+++.++++|.|+||++..+
T Consensus 371 ~~~~~~l~~G~v~IN~~~~~ 390 (443)
T cd07132 371 NKILSNTSSGGVCVNDTIMH 390 (443)
T ss_pred HHHHHhCCcceEEECCcccc
Confidence 99999999999999987543
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-44 Score=300.56 Aligned_cols=178 Identities=23% Similarity=0.338 Sum_probs=169.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++.+++.|+| ++.+.+||++++.+++++
T Consensus 257 p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v 336 (476)
T cd07142 257 PFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKI 336 (476)
T ss_pred eeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..++++.||++.++++++++++||+||||++|++|+|.+||++++|++++||+++|||
T Consensus 337 ~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft 416 (476)
T cd07142 337 LSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFS 416 (476)
T ss_pred HHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99886 599999998753 3688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.+++.++++|+|+||++.
T Consensus 417 ~d~~~a~~~~~~l~~G~v~iN~~~ 440 (476)
T cd07142 417 KNIDTANTLSRALKAGTVWVNCYD 440 (476)
T ss_pred CCHHHHHHHHHhCCcceEEECCCC
Confidence 999999999999999999999754
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-44 Score=301.34 Aligned_cols=178 Identities=20% Similarity=0.332 Sum_probs=168.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.++++||| ++.+++||++++.+++++
T Consensus 256 p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 335 (488)
T PRK13252 256 PLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKV 335 (488)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||... ..++|++||++.++++++++++||+||||++|++|+|.+||++++|++++||++
T Consensus 336 ~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a 415 (488)
T PRK13252 336 LGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAA 415 (488)
T ss_pred HHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeE
Confidence 99886 599999998632 258899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|||+|.+++.+++.++++|+|+||++.
T Consensus 416 ~I~t~d~~~~~~~~~~l~~G~v~iN~~~ 443 (488)
T PRK13252 416 GVFTADLSRAHRVIHQLEAGICWINTWG 443 (488)
T ss_pred EEEeCCHHHHHHHHHhcCccEEEECCCC
Confidence 9999999999999999999999999854
|
|
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-44 Score=299.09 Aligned_cols=177 Identities=22% Similarity=0.384 Sum_probs=168.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+++||.|+++++||||++++|+|+++|++++.+++.|+|. +++.+||++++.+++++
T Consensus 236 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 315 (453)
T cd07094 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERV 315 (453)
T ss_pred ceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 58899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .+.+++||++.++++++++++||+||||++|++|+|.+||++++|.++|||++||||+
T Consensus 316 ~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~ 393 (453)
T cd07094 316 ERWVEEAVEAGARLLCGGER--DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTR 393 (453)
T ss_pred HHHHHHHHHCCCEEEeCccC--CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECC
Confidence 99987 59999999864 4789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|.+++.++++++++|+|+||++..
T Consensus 394 d~~~a~~~~~~l~~g~v~iN~~~~ 417 (453)
T cd07094 394 DLNVAFKAAEKLEVGGVMVNDSSA 417 (453)
T ss_pred CHHHHHHHHHhcCcCeEEEcCCCC
Confidence 999999999999999999998753
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-44 Score=300.00 Aligned_cols=179 Identities=22% Similarity=0.422 Sum_probs=170.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|++++.+++.|+| ++.+.+||++++.+++++
T Consensus 248 ~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 327 (468)
T cd07088 248 PAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKV 327 (468)
T ss_pred eEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 458899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC--CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSGTIALGGDMDA--SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~--~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +|+++++||..+. .+++++||++.++++++.+++||+||||++|++|+|++||++++|+++|||+++||
T Consensus 328 ~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 407 (468)
T cd07088 328 EEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIY 407 (468)
T ss_pred HHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEE
Confidence 98876 6999999997543 58899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|.+++.+++.++++|+|+||++..
T Consensus 408 t~d~~~~~~~~~~l~~g~v~iN~~~~ 433 (468)
T cd07088 408 TENLNTAMRATNELEFGETYINRENF 433 (468)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCC
Confidence 99999999999999999999998764
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-44 Score=299.76 Aligned_cols=178 Identities=24% Similarity=0.408 Sum_probs=169.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.+++.|+|. +.+.+||++++.+.+++
T Consensus 246 p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 325 (465)
T cd07151 246 PFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGL 325 (465)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 58899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .+++++||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|||+
T Consensus 326 ~~~v~~a~~~ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~ 403 (465)
T cd07151 326 LDKIEQAVEEGATLLVGGEA--EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTS 403 (465)
T ss_pred HHHHHHHHhCCCEEEecCCc--CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECC
Confidence 99886 69999999864 5789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|.+++.+++.++++|+|+||+++.+
T Consensus 404 d~~~a~~~~~~l~~G~v~iN~~~~~ 428 (465)
T cd07151 404 DLERGVQFARRIDAGMTHINDQPVN 428 (465)
T ss_pred CHHHHHHHHHhCCcCeEEECCCCCC
Confidence 9999999999999999999987643
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-44 Score=297.85 Aligned_cols=179 Identities=45% Similarity=0.838 Sum_probs=171.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|+++||.|++++++|||+++||+|+++|++++.+++.|+|++.+.+||+++..+.+++.
T Consensus 220 ~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~ 299 (436)
T cd07135 220 PVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLK 299 (436)
T ss_pred cEEECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999997788999999999999999
Q ss_pred HHHhc-CceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHH
Q psy11681 81 SLVHS-SGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQV 159 (181)
Q Consensus 81 ~~~~~-ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~ 159 (181)
+++++ |+++++||.....++|+.||++.++++++.+++||+||||++|++|+|.+||++++|++++||+++|||+|.++
T Consensus 300 ~~v~~ag~~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~ 379 (436)
T cd07135 300 SLLDTTKGKVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSE 379 (436)
T ss_pred HHHHhcCCeEEECCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 99984 88999999765578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCccc
Q psy11681 160 QELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 160 ~~~~~~~~~~g~v~iN~~~~ 179 (181)
+.+++.++++|+|+||++..
T Consensus 380 a~~~~~~l~~g~v~iN~~~~ 399 (436)
T cd07135 380 IDHILTRTRSGGVVINDTLI 399 (436)
T ss_pred HHHHHhcCCcCeEEECCccc
Confidence 99999999999999998654
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-44 Score=303.30 Aligned_cols=179 Identities=24% Similarity=0.347 Sum_probs=167.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|++++.++++|+| ++.+++||+++..+++++
T Consensus 290 p~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v 369 (533)
T TIGR01236 290 FHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKN 369 (533)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 468899999999999999
Q ss_pred HHHHh----cC--ceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCC--HHHHHHHH-hcCCCCce
Q psy11681 80 KSLVH----SS--GTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVES--AFEAIQFI-NARPKPLT 149 (181)
Q Consensus 80 ~~~~~----~g--a~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~ 149 (181)
.++++ +| +++++||... ..|+|++||++.++++++++++||+||||++|++|+| ++||++++ |.++|||+
T Consensus 370 ~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~ 449 (533)
T TIGR01236 370 VKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLT 449 (533)
T ss_pred HHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCce
Confidence 99887 44 7999998653 3588999999999999999999999999999999998 59999999 78999999
Q ss_pred EEEeeCcHHHHHHHHhhcc--eeeEEECCccc
Q psy11681 150 LYLFSSNAQVQELFIHQTH--SGSMCINDTVM 179 (181)
Q Consensus 150 ~~i~s~d~~~~~~~~~~~~--~g~v~iN~~~~ 179 (181)
++|||+|.+++.+++++++ +|+|+||+.++
T Consensus 450 a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~ 481 (533)
T TIGR01236 450 GAVFAKDRQAILEADKRLRFAAGNFYINDKPT 481 (533)
T ss_pred EEEEeCCHHHHHHHHHHhhhcCcEEEECCCCC
Confidence 9999999999999999977 99999997654
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-44 Score=300.79 Aligned_cols=179 Identities=18% Similarity=0.326 Sum_probs=169.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|++++.++++|+| ++.+.+||++++.+.+++
T Consensus 250 p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v 329 (488)
T TIGR02299 250 PVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKV 329 (488)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 458899999999999999
Q ss_pred HHHHh----cCceeeeCCccC--------CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCC
Q psy11681 80 KSLVH----SSGTIALGGDMD--------ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKP 147 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~--------~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 147 (181)
.++++ +|+++++||... ..+++++||++.++++++.+++||+||||++|++|+|.+||++++|+++||
T Consensus 330 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~g 409 (488)
T TIGR02299 330 LGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYG 409 (488)
T ss_pred HHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCC
Confidence 99886 699999998642 247899999999999999999999999999999999999999999999999
Q ss_pred ceEEEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 148 LTLYLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 148 l~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|++||||+|.+.+.+++.++++|+|+||+...
T Consensus 410 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~ 441 (488)
T TIGR02299 410 LAGYVWTNDVGRAHRVALALEAGMIWVNSQNV 441 (488)
T ss_pred ceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC
Confidence 99999999999999999999999999998654
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-44 Score=298.21 Aligned_cols=178 Identities=22% Similarity=0.338 Sum_probs=169.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.++++|+| ++++++||++++.+++++
T Consensus 232 p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 311 (453)
T cd07115 232 ANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRV 311 (453)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||..+. .+.+++||++.++++++++++||+||||++|++|+|.+||++++|+.++||+++|||
T Consensus 312 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs 391 (453)
T cd07115 312 LDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWT 391 (453)
T ss_pred HHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEC
Confidence 99887 5899999987543 588999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+.+.+++.++++|+|+||++.
T Consensus 392 ~d~~~~~~~~~~l~~G~v~iN~~~ 415 (453)
T cd07115 392 RDLGRAHRVAAALKAGTVWINTYN 415 (453)
T ss_pred CCHHHHHHHHHhcCccEEEECCCC
Confidence 999999999999999999999854
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-44 Score=302.16 Aligned_cols=179 Identities=20% Similarity=0.329 Sum_probs=169.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|.|+||.|++++++|||+++||+|+++|++++.+++.|+| ++.+++||++++.+++++
T Consensus 267 p~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v 346 (524)
T PRK09407 267 PMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETV 346 (524)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999998 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccC--CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSGTIALGGDMD--ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~--~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +|+++++||... ..++|+.||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++||
T Consensus 347 ~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~ 426 (524)
T PRK09407 347 SAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVW 426 (524)
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEE
Confidence 98886 689999998642 247899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|.+++.+++.++++|+|+||++..
T Consensus 427 t~d~~~a~~~~~~l~~G~v~IN~~~~ 452 (524)
T PRK09407 427 TGDTARGRAIAARIRAGTVNVNEGYA 452 (524)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCC
Confidence 99999999999999999999998653
|
|
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-44 Score=297.11 Aligned_cols=178 Identities=44% Similarity=0.845 Sum_probs=169.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.|+|.+.+++||++++.+.+++.
T Consensus 212 p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~ 291 (449)
T cd07136 212 PCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLA 291 (449)
T ss_pred eEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999987688999999999999999
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
++++. +++++||..+..+.++.||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|||+|...+
T Consensus 292 ~~i~~-a~~~~gG~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a 370 (449)
T cd07136 292 GLLDN-GKIVFGGNTDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVE 370 (449)
T ss_pred HHHhc-ceEEECCCcCCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99985 69999987644688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCccc
Q psy11681 161 ELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~ 179 (181)
.+++.++++|.|+||+...
T Consensus 371 ~~~~~~l~~G~v~vN~~~~ 389 (449)
T cd07136 371 KKVLENLSFGGGCINDTIM 389 (449)
T ss_pred HHHHHhCCcceEEECCccc
Confidence 9999999999999998653
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-44 Score=297.53 Aligned_cols=179 Identities=21% Similarity=0.340 Sum_probs=169.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++.+++.|+| ++.+++||++++.+++++
T Consensus 233 ~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~ 312 (455)
T cd07120 233 PCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRV 312 (455)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CC---CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH----SSGTIALGGDM-DA---SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~---~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ +|+++++||.. +. .+.+++||++.++++++.+++||+||||++|++|+|.+||++++|.++|||+++
T Consensus 313 ~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ 392 (455)
T cd07120 313 DRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAAS 392 (455)
T ss_pred HHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEE
Confidence 99886 59999997753 22 578999999999999999999999999999999999999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|||+|.+++.+++.++++|+|+||++..
T Consensus 393 ift~d~~~a~~~~~~l~~G~v~iN~~~~ 420 (455)
T cd07120 393 VWTRDLARAMRVARAIRAGTVWINDWNK 420 (455)
T ss_pred EEcCCHHHHHHHHHhcCcceEEECCCCC
Confidence 9999999999999999999999998754
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=297.09 Aligned_cols=178 Identities=22% Similarity=0.394 Sum_probs=168.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|+++||.|++++++|||++++|+|+++|++++.++++|+| ++.+.+||+++..+.+++
T Consensus 230 ~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i 309 (452)
T cd07102 230 PAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFV 309 (452)
T ss_pred ceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568899999999999999
Q ss_pred HHHHh----cCceeeeCCcc----CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH----SSGTIALGGDM----DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~----~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ +|+++++||.. +..++|++||++.+++++++++++|+||||++|++|+|.+||++++|.++|||+++
T Consensus 310 ~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~ 389 (452)
T cd07102 310 RAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTAS 389 (452)
T ss_pred HHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEE
Confidence 98876 59999999864 23688999999999999999999999999999999999999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|||+|.+++.+++.++++|+|+||++.
T Consensus 390 i~t~d~~~~~~~~~~l~~G~v~iN~~~ 416 (452)
T cd07102 390 VWTKDIARAEALGEQLETGTVFMNRCD 416 (452)
T ss_pred EEcCCHHHHHHHHHHcCcceEEECCCC
Confidence 999999999999999999999999865
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-44 Score=298.36 Aligned_cols=178 Identities=20% Similarity=0.279 Sum_probs=169.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|++++.++++|+| ++.+++||+++..+.+++
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v 317 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV 317 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 458899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC---CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDMDA---SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~---~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|+++++||.... .++++.||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|
T Consensus 318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v 397 (459)
T cd07089 318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGV 397 (459)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEE
Confidence 99886 6999999987533 5889999999999999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|.+++.+++.++++|+|+||++.
T Consensus 398 ~t~d~~~~~~~~~~~~~G~v~iN~~~ 423 (459)
T cd07089 398 WSADVDRAYRVARRIRTGSVGINGGG 423 (459)
T ss_pred EcCCHHHHHHHHHhcCcCeEEECCCC
Confidence 99999999999999999999999865
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-44 Score=299.15 Aligned_cols=178 Identities=23% Similarity=0.354 Sum_probs=169.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|+|+++||||+++||+|+++|++++..+++|+| ++.+.+||++++.+++++
T Consensus 257 ~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 336 (476)
T cd07091 257 PNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKI 336 (476)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||..+ ..+++++||++.++++++.+++||+||||++|++|+|.+||++++|.+++||+++|||
T Consensus 337 ~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t 416 (476)
T cd07091 337 LSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFT 416 (476)
T ss_pred HHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEC
Confidence 88876 589999998754 4678999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.++++++++|+|+||++.
T Consensus 417 ~d~~~~~~~~~~l~~g~v~iN~~~ 440 (476)
T cd07091 417 KDINKALRVSRALKAGTVWVNTYN 440 (476)
T ss_pred CCHHHHHHHHHhcCcceEEECCCC
Confidence 999999999999999999999854
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=295.10 Aligned_cols=178 Identities=22% Similarity=0.284 Sum_probs=167.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccc-cHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~-~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||++ ++|+|+++|++++.+++.|+|. +.+.+||+++..+.++
T Consensus 212 ~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~ 291 (431)
T cd07095 212 PLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAAR 291 (431)
T ss_pred eEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHH
Confidence 6899999999999999999999999999999999999999 9999999999999999999995 5789999999999999
Q ss_pred HHHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 79 LKSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
+.++++ +|+++++||.. +..++|++||++ ++++++.+++||+||||++|++|+|.+||++++|+++|||+++||
T Consensus 292 i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 370 (431)
T cd07095 292 YLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLL 370 (431)
T ss_pred HHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEE
Confidence 998886 69999999864 346889999998 688889999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|..++.+++.++++|+|+||++..
T Consensus 371 s~d~~~a~~~~~~l~~G~v~iN~~~~ 396 (431)
T cd07095 371 SDDEALFERFLARIRAGIVNWNRPTT 396 (431)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCC
Confidence 99999999999999999999998653
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-44 Score=299.85 Aligned_cols=176 Identities=23% Similarity=0.323 Sum_probs=168.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|++++.+++.|+|.+.+++||+++..+++++.
T Consensus 270 p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gp~i~~~~~~~v~ 349 (496)
T PLN00412 270 ACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIE 349 (496)
T ss_pred eEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcccCCcCCCcCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999997788999999999999998
Q ss_pred HHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCc
Q psy11681 81 SLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d 156 (181)
++++ +|+++++||.. .++|+.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+|
T Consensus 350 ~~i~~a~~~Ga~~l~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d 427 (496)
T PLN00412 350 GLVMDAKEKGATFCQEWKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 427 (496)
T ss_pred HHHHHHHHCCCEEEecCCC--CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 8875 58999987743 68899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCcc
Q psy11681 157 AQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 157 ~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
.+++.++++++++|+|+||++.
T Consensus 428 ~~~a~~~~~~l~~G~v~vN~~~ 449 (496)
T PLN00412 428 INKAILISDAMETGTVQINSAP 449 (496)
T ss_pred HHHHHHHHHhCCcceEEEcCCC
Confidence 9999999999999999999875
|
|
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-44 Score=297.46 Aligned_cols=177 Identities=28% Similarity=0.447 Sum_probs=168.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++.++++|+| ++++++||++++.+.+++
T Consensus 238 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 317 (456)
T cd07145 238 PMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERM 317 (456)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 468999999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||..+. +++++||++.++++++.+++||+||||++|++|+|.+||++++|+.++||+++|||+
T Consensus 318 ~~~i~~a~~~ga~vl~gg~~~~-g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 396 (456)
T cd07145 318 ENLVNDAVEKGGKILYGGKRDE-GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTN 396 (456)
T ss_pred HHHHHHHHHCCCEEEeCCCCCC-CeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECC
Confidence 99987 5999999986543 889999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|.+++.+++.++++|+|+||+.+
T Consensus 397 d~~~~~~~~~~~~~g~v~vN~~~ 419 (456)
T cd07145 397 DINRALKVARELEAGGVVINDST 419 (456)
T ss_pred CHHHHHHHHHhCCcceEEECCCC
Confidence 99999999999999999999865
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-44 Score=301.10 Aligned_cols=180 Identities=22% Similarity=0.342 Sum_probs=170.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|. +.+.+||++++.+++++
T Consensus 287 p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v 366 (512)
T cd07124 287 AIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRI 366 (512)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 57899999999999999
Q ss_pred HHHHh---cCceeeeCCccCC---CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH---SSGTIALGGDMDA---SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~---~ga~~~~gg~~~~---~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ .|+++++||..+. .++|++||++.++++++.+++||+||||++|++|+|.+||++++|++++||+++||
T Consensus 367 ~~~i~~a~~g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 446 (512)
T cd07124 367 RRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVF 446 (512)
T ss_pred HHHHHHHHhCCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEE
Confidence 99987 4899999997543 58899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|+|.+.+.+++.++++|+|+||+++++
T Consensus 447 t~d~~~~~~~~~~l~~G~v~vN~~~~~ 473 (512)
T cd07124 447 SRSPEHLERARREFEVGNLYANRKITG 473 (512)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCC
Confidence 999999999999999999999987643
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=299.16 Aligned_cols=179 Identities=22% Similarity=0.345 Sum_probs=168.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhc-ccccCC-CCCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDS-WYTEQV-QGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~-~~~g~~-~~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|++++.+ +++|+| ++.+++||+++..++++
T Consensus 259 p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~ 338 (484)
T cd07144 259 PALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDR 338 (484)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999985 888998 56899999999999999
Q ss_pred HHHHHh----cCceeeeCCccCC----CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 79 LKSLVH----SSGTIALGGDMDA----SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~~~----~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
+.++++ +|+++++||.... .+.+++||++.++++++.+++||+||||++|++|+|++||++++|++++||++
T Consensus 339 ~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa 418 (484)
T cd07144 339 VLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAA 418 (484)
T ss_pred HHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceE
Confidence 999887 5899999987532 57899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|||+|.+++.+++.++++|+|+||++..
T Consensus 419 ~i~t~d~~~a~~~~~~l~~G~v~iN~~~~ 447 (484)
T cd07144 419 AVFTKDIRRAHRVARELEAGMVWINSSND 447 (484)
T ss_pred EEECCCHHHHHHHHHhcCcCEEEECCCCC
Confidence 99999999999999999999999998653
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-44 Score=297.69 Aligned_cols=179 Identities=23% Similarity=0.332 Sum_probs=169.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHh-chhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGK-CINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~-~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++ |.|+||.|++++++|||++++|+|+++|++++..+++|+| ++.+.+||++++.+.++
T Consensus 231 ~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~ 310 (457)
T cd07108 231 PMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAK 310 (457)
T ss_pred eeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHH
Confidence 789999999999999999995 9999999999999999999999999999999999999999 46889999999999999
Q ss_pred HHHHHh-----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCc
Q psy11681 79 LKSLVH-----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPL 148 (181)
Q Consensus 79 ~~~~~~-----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 148 (181)
+.++++ +|+++++||..+ ..+.++.||++.++++++.+++||+||||++|++|+|.+||++++|++++||
T Consensus 311 ~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL 390 (457)
T cd07108 311 VCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGL 390 (457)
T ss_pred HHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCc
Confidence 999986 699999998653 3588999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 149 TLYLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 149 ~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+++|||+|.+++.++++++++|+|+||++..
T Consensus 391 s~~vft~d~~~a~~~~~~l~~g~v~iN~~~~ 421 (457)
T cd07108 391 AAYVWTRDLGRALRAAHALEAGWVQVNQGGG 421 (457)
T ss_pred eeEEEcCCHHHHHHHHHhcCcceEEECCCCC
Confidence 9999999999999999999999999998754
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=298.42 Aligned_cols=178 Identities=19% Similarity=0.270 Sum_probs=169.0
Q ss_pred CeEEeCCC-----CHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHH
Q psy11681 1 PLYIDSSV-----NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDK 74 (181)
Q Consensus 1 p~iV~~da-----Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~ 74 (181)
|+||++|| |++.|++.+++++|+|+||.|++++|+|||++++|+|+++|++++.++++|+| ++.+++||++++.
T Consensus 250 p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~ 329 (480)
T cd07559 250 PNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKD 329 (480)
T ss_pred eEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHH
Confidence 68999999 99999999999999999999999999999999999999999999999999999 5688999999999
Q ss_pred HHHHHHHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCC
Q psy11681 75 HFQRLKSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARP 145 (181)
Q Consensus 75 ~~~~~~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 145 (181)
+++++.++++ +|+++++||... ..+.|+.||++.++++++.+++||+||||++|++|+|.+||++++|+++
T Consensus 330 ~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 409 (480)
T cd07559 330 QLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTE 409 (480)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCC
Confidence 9999999886 699999998653 3588999999999999999999999999999999999999999999999
Q ss_pred CCceEEEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 146 KPLTLYLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 146 ~gl~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|||+++|||+|.+++.+++.++++|+|+||++.
T Consensus 410 ~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~ 442 (480)
T cd07559 410 YGLGGGVWTRDINRALRVARGIQTGRVWVNCYH 442 (480)
T ss_pred CCCeEEEECCCHHHHHHHHHhcCcceEEECCCC
Confidence 999999999999999999999999999999754
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=296.91 Aligned_cols=179 Identities=22% Similarity=0.377 Sum_probs=170.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+++||.|++++++|||++++|+|+++|++++.++++|+| ++.+++||++++.+.+++
T Consensus 234 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~ 313 (454)
T cd07118 234 PQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKI 313 (454)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC--CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSGTIALGGDMDA--SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~--~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +|+++++||.... .|++++||++.++++++.+++||+||||++|++|+|.+||++++|.+++||+++||
T Consensus 314 ~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vf 393 (454)
T cd07118 314 TDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVW 393 (454)
T ss_pred HHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEE
Confidence 99987 5899999997543 68899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|.+.+.+++.++++|+|+||++..
T Consensus 394 t~d~~~~~~~~~~l~~g~v~iN~~~~ 419 (454)
T cd07118 394 SKDIDTALTVARRIRAGTVWVNTFLD 419 (454)
T ss_pred CCCHHHHHHHHHhcCcCEEEECCCCC
Confidence 99999999999999999999998654
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=297.00 Aligned_cols=178 Identities=24% Similarity=0.385 Sum_probs=169.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.+++.|+|.+.+++||++++.+.+++.
T Consensus 232 ~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~ 311 (454)
T cd07109 232 PQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVE 311 (454)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999997788999999999999999
Q ss_pred HHHh----cCceeeeCCccC----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 81 SLVH----SSGTIALGGDMD----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~~~----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
++++ +|+++++||... ..+++++||++.++++++.+++||+||||++|++|+|.+||++++|++++||+++|
T Consensus 312 ~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i 391 (454)
T cd07109 312 GFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGV 391 (454)
T ss_pred HHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEE
Confidence 9987 589999998643 25889999999999999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|.+++.+++.++++|+|+||++.
T Consensus 392 ~t~d~~~~~~~~~~l~~g~v~iN~~~ 417 (454)
T cd07109 392 WTRDGDRALRVARRLRAGQVFVNNYG 417 (454)
T ss_pred ECCCHHHHHHHHHhcCcCeEEECCCC
Confidence 99999999999999999999999876
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=297.12 Aligned_cols=178 Identities=21% Similarity=0.361 Sum_probs=168.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.++||.|+++++||||+++||+|+++|++++.+++.|+| ++.+++||+++..+++++
T Consensus 230 p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 309 (457)
T cd07090 230 PLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKV 309 (457)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC------CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCce
Q psy11681 80 KSLVH----SSGTIALGGDMD------ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLT 149 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~------~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 149 (181)
.++++ +|+++++||... ..++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+
T Consensus 310 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs 389 (457)
T cd07090 310 LGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLA 389 (457)
T ss_pred HHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCce
Confidence 98876 699999998642 24789999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 150 LYLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 150 ~~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
++|||+|.+.+.+++.++++|+|+||+..
T Consensus 390 a~i~t~d~~~~~~~~~~l~~G~v~iN~~~ 418 (457)
T cd07090 390 AGVFTRDLQRAHRVIAQLQAGTCWINTYN 418 (457)
T ss_pred EEEEcCCHHHHHHHHHhCCcCeEEECCCC
Confidence 99999999999999999999999999854
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=298.11 Aligned_cols=178 Identities=24% Similarity=0.346 Sum_probs=169.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.++++|+| ++.+++||++++.+++++
T Consensus 260 p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~ 339 (481)
T cd07143 260 PNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERI 339 (481)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||..+ ..+.|+.||++.++++++++++||+||||++|++|+|.+||++++|.+++||+++|||
T Consensus 340 ~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 419 (481)
T cd07143 340 MSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFT 419 (481)
T ss_pred HHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99886 599999999753 3678999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+.+.++++++++|+|+||++.
T Consensus 420 ~d~~~~~~~~~~l~~G~v~iN~~~ 443 (481)
T cd07143 420 NNINNAIRVANALKAGTVWVNCYN 443 (481)
T ss_pred CCHHHHHHHHHhcCcCeEEECCCC
Confidence 999999999999999999999864
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=296.75 Aligned_cols=178 Identities=24% Similarity=0.413 Sum_probs=169.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++.++++|+|. +.+++||++++.+.+++
T Consensus 234 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 313 (451)
T cd07150 234 PLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERI 313 (451)
T ss_pred eeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999995 57899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .+.++.||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|||+
T Consensus 314 ~~~i~~a~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~ 391 (451)
T cd07150 314 KRQVEDAVAKGAKLLTGGKY--DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTN 391 (451)
T ss_pred HHHHHHHHhCCCEEEeCCcc--CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeC
Confidence 99886 69999999864 4789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|.+++.+++.++++|+|+||++..+
T Consensus 392 d~~~~~~~~~~l~~G~v~iN~~~~~ 416 (451)
T cd07150 392 DLQRAFKLAERLESGMVHINDPTIL 416 (451)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCC
Confidence 9999999999999999999998654
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=297.79 Aligned_cols=180 Identities=21% Similarity=0.381 Sum_probs=169.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|++++.++++|+| ++.+++||++++.+++++
T Consensus 250 p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 329 (478)
T cd07131 250 PIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKV 329 (478)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||... ..++|++||++.++++++++++||+||||++|++|+|.+||++++|++++||++
T Consensus 330 ~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~ 409 (478)
T cd07131 330 LNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSS 409 (478)
T ss_pred HHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceE
Confidence 98876 699999998642 357899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+|||+|.+++.+++.++++|+|+||++..+
T Consensus 410 ~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~ 439 (478)
T cd07131 410 AIYTEDVNKAFRARRDLEAGITYVNAPTIG 439 (478)
T ss_pred EEEcCCHHHHHHHHHhcCccEEEECCCCCC
Confidence 999999999999999999999999987653
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=297.40 Aligned_cols=179 Identities=23% Similarity=0.357 Sum_probs=169.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+| ++.+.+||+++..+.+++
T Consensus 248 ~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 327 (467)
T TIGR01804 248 PLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKV 327 (467)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-----CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMDA-----SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-----~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||.... .+.++.||++.++++++++++||+||||++|++|+|.+||++++|++++||++
T Consensus 328 ~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa 407 (467)
T TIGR01804 328 ESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAA 407 (467)
T ss_pred HHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceE
Confidence 99887 5999999986432 47899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|||+|..++.+++.++++|+|+||++..
T Consensus 408 ~i~t~d~~~~~~~~~~l~~G~v~iN~~~~ 436 (467)
T TIGR01804 408 GVFTADLGRAHRVANQLKAGTVWINDFHP 436 (467)
T ss_pred EEECCCHHHHHHHHHhCCcceEEECCCCC
Confidence 99999999999999999999999998653
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=296.84 Aligned_cols=178 Identities=23% Similarity=0.361 Sum_probs=169.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|++++.+++.|+|. +.+++||++++.+++++
T Consensus 235 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~ 314 (456)
T cd07110 235 PIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKV 314 (456)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 58999999999999999
Q ss_pred HHHHh----cCceeeeCCccC---CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDMD---ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~---~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|+++++||... ..++++.||++.++++++.++++|+||||++|++|+|.+||++++|++++||+++|
T Consensus 315 ~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v 394 (456)
T cd07110 315 LSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAV 394 (456)
T ss_pred HHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEE
Confidence 99886 599999998753 35789999999999999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|.+++.+++.++++|+|+||++.
T Consensus 395 ~t~d~~~~~~~~~~l~~G~v~iN~~~ 420 (456)
T cd07110 395 ISRDAERCDRVAEALEAGIVWINCSQ 420 (456)
T ss_pred ECCCHHHHHHHHHhCCcceEEECCCC
Confidence 99999999999999999999999864
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=296.10 Aligned_cols=177 Identities=23% Similarity=0.398 Sum_probs=168.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||+++||+|+++|++++.+++.|+| ++.+.+||++++.+.+++
T Consensus 235 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 314 (452)
T cd07147 235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERV 314 (452)
T ss_pred cEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 458899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .++|++||++.++++++++++||+||||++|++|+|.+||++++|++++||+++|||+
T Consensus 315 ~~~i~~a~~~Ga~~l~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~ 392 (452)
T cd07147 315 EGWVNEAVDAGAKLLTGGKR--DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTR 392 (452)
T ss_pred HHHHHHHHHCCCEEEecCCc--CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECC
Confidence 99887 59999999865 4789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|.+++.+++.++++|+|+||+.+.
T Consensus 393 d~~~a~~~~~~~~~G~v~vN~~~~ 416 (452)
T cd07147 393 DLEKALRAWDELEVGGVVINDVPT 416 (452)
T ss_pred CHHHHHHHHHHcCcceEEECCCCC
Confidence 999999999999999999998653
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=296.40 Aligned_cols=178 Identities=21% Similarity=0.367 Sum_probs=169.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|++++.++++|+| ++.+++||++++.+.+++
T Consensus 234 ~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 313 (457)
T cd07114 234 PNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKV 313 (457)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-----CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMDA-----SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-----~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||.... .+.+++||++.++++++.+++||+||||++|++|+|.+||++++|++++||++
T Consensus 314 ~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~ 393 (457)
T cd07114 314 ERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAA 393 (457)
T ss_pred HHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCcee
Confidence 99887 5999999986532 47899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|||+|.+.+.+++.++++|+|+||++.
T Consensus 394 ~ift~d~~~~~~~~~~l~~g~v~iN~~~ 421 (457)
T cd07114 394 GIWTRDLARAHRVARAIEAGTVWVNTYR 421 (457)
T ss_pred EEECCCHHHHHHHHHhcCcceEEECCCC
Confidence 9999999999999999999999999854
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=298.33 Aligned_cols=178 Identities=24% Similarity=0.340 Sum_probs=167.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccH-HHHHHHHHHHhhcccccCCC--CCccccccccHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQ-AQILNQAKAVLDSWYTEQVQ--GSKHYCRIVSDKHFQ 77 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~-d~f~~~l~~~~~~~~~g~~~--~~~~~g~l~~~~~~~ 77 (181)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|++++.++++|||. +.+++||+++..+++
T Consensus 249 p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~ 328 (487)
T PRK09457 249 PLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQ 328 (487)
T ss_pred eEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHH
Confidence 789999999999999999999999999999999999999998 99999999999999999983 578999999999999
Q ss_pred HHHHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 78 RLKSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 78 ~~~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
++.++++ +|++++.||.. +..+.|++||++ ++++++++++||+||||++|++|+|.+||++++|+++|||+++|
T Consensus 329 ~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v 407 (487)
T PRK09457 329 GLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGL 407 (487)
T ss_pred HHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEE
Confidence 9998776 69999998754 345789999998 78999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
||+|.+++.+++.++++|+|+||+...
T Consensus 408 ~t~d~~~~~~~~~~l~~G~v~iN~~~~ 434 (487)
T PRK09457 408 LSDDREDYDQFLLEIRAGIVNWNKPLT 434 (487)
T ss_pred EcCCHHHHHHHHHhCCcceEEEECCCC
Confidence 999999999999999999999998754
|
|
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=298.91 Aligned_cols=177 Identities=23% Similarity=0.403 Sum_probs=166.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+| ++.+.+||+++..+.+++
T Consensus 272 p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v 351 (508)
T PLN02315 272 AIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNF 351 (508)
T ss_pred eEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 458899999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||.. +..++|++||++ ++++++.+++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 352 ~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft 430 (508)
T PLN02315 352 EKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFT 430 (508)
T ss_pred HHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEc
Confidence 99886 69999999974 346889999998 6999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHh--hcceeeEEECCcc
Q psy11681 155 SNAQVQELFIH--QTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~--~~~~g~v~iN~~~ 178 (181)
+|.+.+.++++ ++++|.|+||++.
T Consensus 431 ~d~~~a~~~~~~~~l~~G~v~iN~~~ 456 (508)
T PLN02315 431 RNPETIFKWIGPLGSDCGIVNVNIPT 456 (508)
T ss_pred CCHHHHHHHhhhcccceeEEEEcCCC
Confidence 99999999985 7999999999854
|
|
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=299.48 Aligned_cols=180 Identities=24% Similarity=0.342 Sum_probs=168.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|+|++++|||+++||+|+++|++++.++++|+| ++.+++||++++.+.+++
T Consensus 288 p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v 367 (511)
T TIGR01237 288 AIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKI 367 (511)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568899999999999999
Q ss_pred HHHHhc---CceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVHS---SGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~~---ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.+++++ .+++++||... ..++|+.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+
T Consensus 368 ~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~ 447 (511)
T TIGR01237 368 QEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSN 447 (511)
T ss_pred HHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcC
Confidence 998872 23888888643 35789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|.+++.++++++++|+|+||++.++
T Consensus 448 d~~~~~~~~~~l~~G~v~iN~~~~~ 472 (511)
T TIGR01237 448 TRDHIERAAAEFEVGNLYFNRTITG 472 (511)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCC
Confidence 9999999999999999999987653
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=296.95 Aligned_cols=177 Identities=20% Similarity=0.388 Sum_probs=166.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.|||. +.+++||++++.+++++
T Consensus 250 p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~ 329 (474)
T cd07130 250 AIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNY 329 (474)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 57899999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||.. +..++|++||++.++++ +.+++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 330 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t 408 (474)
T cd07130 330 LAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFT 408 (474)
T ss_pred HHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEc
Confidence 99886 69999999975 33588999999987766 89999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhh--cceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQ--THSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~--~~~g~v~iN~~~ 178 (181)
+|.+++.+++.+ +++|+|+||..+
T Consensus 409 ~d~~~a~~~~~~~~~~~g~v~iN~~~ 434 (474)
T cd07130 409 TDLRNAFRWLGPKGSDCGIVNVNIGT 434 (474)
T ss_pred CCHHHHHHHHhhcCcceEEEEEcCCC
Confidence 999999999987 899999999754
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=295.52 Aligned_cols=179 Identities=19% Similarity=0.302 Sum_probs=169.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|+|+||.|++++++|||++++|+|+++|++++++++.|+| ++.+.+||++++.+.+++
T Consensus 232 p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i 311 (450)
T cd07092 232 PVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERV 311 (450)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 458899999999999999
Q ss_pred HHHHh---cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH---SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~---~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||... ..|++++||++.++++++++++||+||||++|++|+|.+||++++|+.++||+++|||+
T Consensus 312 ~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~ 391 (450)
T cd07092 312 AGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTR 391 (450)
T ss_pred HHHHHHHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECC
Confidence 99887 499999999753 36889999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|.+++.+++.++++|+|+||++..
T Consensus 392 d~~~~~~~~~~l~~g~v~iN~~~~ 415 (450)
T cd07092 392 DVGRAMRLSARLDFGTVWVNTHIP 415 (450)
T ss_pred CHHHHHHHHHhcCccEEEECCCCC
Confidence 999999999999999999998653
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=297.92 Aligned_cols=178 Identities=25% Similarity=0.373 Sum_probs=168.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.++++|+| ++.+++||+++..+.+++
T Consensus 249 ~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~ 328 (482)
T cd07119 249 PNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKV 328 (482)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-----CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMDA-----SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-----~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||.... .+++++||++.++++++.+++||+||||++|++|+|.+||++++|+.+|||++
T Consensus 329 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~ 408 (482)
T cd07119 329 LSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAG 408 (482)
T ss_pred HHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceE
Confidence 99887 5999999986432 57899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|||+|.+.+.+++.++++|+|+||++.
T Consensus 409 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~ 436 (482)
T cd07119 409 AVWTKDIARANRVARRLRAGTVWINDYH 436 (482)
T ss_pred EEECCCHHHHHHHHHhcCcceEEECCCC
Confidence 9999999999999999999999999863
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=293.89 Aligned_cols=178 Identities=25% Similarity=0.474 Sum_probs=169.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|++++.++++|+|. +.+.+||++++.+.+++
T Consensus 214 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i 293 (431)
T cd07104 214 PLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRV 293 (431)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 57899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .++++.||++.++++++.+++||+||||++|++|+|.+||++++|++++||+++|||+
T Consensus 294 ~~~i~~a~~~G~~~~~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~ 371 (431)
T cd07104 294 HAIVEDAVAAGARLLTGGTY--EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTR 371 (431)
T ss_pred HHHHHHHHHCCCEEEeCCCC--CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcC
Confidence 99885 59999999864 5789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|.+++.+++.++++|+|+||+++.+
T Consensus 372 d~~~~~~~~~~l~~g~v~iN~~~~~ 396 (431)
T cd07104 372 DLERAMAFAERLETGMVHINDQTVN 396 (431)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCC
Confidence 9999999999999999999998654
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=297.89 Aligned_cols=178 Identities=23% Similarity=0.347 Sum_probs=168.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.+++.|||. +.+.+||+++..+++++
T Consensus 266 ~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v 345 (503)
T PLN02467 266 PIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKV 345 (503)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999994 58899999999999999
Q ss_pred HHHHh----cCceeeeCCccC---CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDMD---ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~---~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|+++++||... ..+.++.||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|
T Consensus 346 ~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v 425 (503)
T PLN02467 346 LKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAV 425 (503)
T ss_pred HHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEE
Confidence 98876 599999998643 25789999999999999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|.+.+.+++.++++|+|+||++.
T Consensus 426 ~t~d~~~a~~~~~~l~~G~v~iN~~~ 451 (503)
T PLN02467 426 ISNDLERCERVSEAFQAGIVWINCSQ 451 (503)
T ss_pred ECCCHHHHHHHHHhCCcceEEECCCC
Confidence 99999999999999999999999864
|
|
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=293.70 Aligned_cols=179 Identities=42% Similarity=0.818 Sum_probs=169.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC--CCCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV--QGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~--~~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++|+++||.|++++++|||++++|+|++.|++++.++..++| ++.+++||++++.+.++
T Consensus 212 ~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~ 291 (433)
T cd07134 212 PTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDR 291 (433)
T ss_pred cEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999888875 56889999999999999
Q ss_pred HHHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 79 LKSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
+.++++ +|+++++||..+..++|+.||++.++++++.+++||+||||++|++|+|.+|+++++|+.++||+++|||
T Consensus 292 i~~~i~~a~~~ga~~~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 371 (433)
T cd07134 292 LKGLLDDAVAKGAKVEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFS 371 (433)
T ss_pred HHHHHHHHHhCCCEEEeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEC
Confidence 988875 6999999997665689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+.+.+++.++++|.|+||+++.
T Consensus 372 ~d~~~~~~~~~~l~~g~v~iN~~~~ 396 (433)
T cd07134 372 KDKANVNKVLARTSSGGVVVNDVVL 396 (433)
T ss_pred CCHHHHHHHHHhCCcceEEECCccc
Confidence 9999999999999999999998754
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=296.78 Aligned_cols=178 Identities=20% Similarity=0.342 Sum_probs=168.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.++++|+| ++.+++||++++.+.+++
T Consensus 251 p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 330 (471)
T cd07139 251 AAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERV 330 (471)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 458899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC---CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDMDA---SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~---~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|+++++||..+. .++++.||++.++++++++++||+||||++|++|+|.+||++++|.+++||+++|
T Consensus 331 ~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i 410 (471)
T cd07139 331 EGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSV 410 (471)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEE
Confidence 99886 5899999987432 4789999999999999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|.+.+.+++.++++|+|+||++.
T Consensus 411 ~s~d~~~~~~~~~~l~~G~v~iN~~~ 436 (471)
T cd07139 411 WTADVERGLAVARRIRTGTVGVNGFR 436 (471)
T ss_pred EcCCHHHHHHHHHhCCcceEEECCCC
Confidence 99999999999999999999999864
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=292.28 Aligned_cols=178 Identities=37% Similarity=0.681 Sum_probs=168.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|++++.+++.|+ .+.+.+||++++.+++++.
T Consensus 213 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~-~~~~~~gpli~~~~~~~v~ 291 (434)
T cd07133 213 PAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL-ADNPDYTSIINERHYARLQ 291 (434)
T ss_pred cEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-CCCCCcCCCCCHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999998886 5678999999999999999
Q ss_pred HHHh----cCceeeeCCccC---CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 81 SLVH----SSGTIALGGDMD---ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~~~---~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
++++ +|+++++||... ..+.|++||++.++++++++++||+||||++|++|+|.+||++++|++++||+++||
T Consensus 292 ~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 371 (434)
T cd07133 292 GLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYF 371 (434)
T ss_pred HHHHHHHhCCCEEEecCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 9886 599999988643 358899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|.+++.+++.++++|+|+||++..
T Consensus 372 t~d~~~a~~~~~~l~~G~v~iN~~~~ 397 (434)
T cd07133 372 GEDKAEQDRVLRRTHSGGVTINDTLL 397 (434)
T ss_pred CCCHHHHHHHHHhCCcceEEECCccc
Confidence 99999999999999999999998753
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=295.62 Aligned_cols=179 Identities=23% Similarity=0.377 Sum_probs=169.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++.++++|+|. +.+++||++++.+++++
T Consensus 261 p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v 340 (480)
T cd07111 261 PFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRI 340 (480)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 68899999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|++++.||.. +..++++.||++.++++++++++||+||||++|++|+|.+||++++|++++||+++|||
T Consensus 341 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t 420 (480)
T cd07111 341 RELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWS 420 (480)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEc
Confidence 99887 58999998864 34688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+.+.+++.++++|+|+||++..
T Consensus 421 ~d~~~~~~~~~~l~aG~v~iN~~~~ 445 (480)
T cd07111 421 ENLSLALEVALSLKAGVVWINGHNL 445 (480)
T ss_pred CCHHHHHHHHHhCCEeeEEECCCCC
Confidence 9999999999999999999998653
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=295.52 Aligned_cols=179 Identities=40% Similarity=0.709 Sum_probs=167.9
Q ss_pred CeEEeC---CCCHHHHHHHHHHHhch-hcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHH
Q psy11681 1 PLYIDS---SVNIELAVRRFLWGKCI-NAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHF 76 (181)
Q Consensus 1 p~iV~~---daDl~~aa~~i~~~~~~-~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~ 76 (181)
|+||++ |||++.|++.+++++|. |+||.|++++|+|||++++|+|+++|++++.+++.|+|.+...+||+++..++
T Consensus 220 p~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~ 299 (484)
T PLN02203 220 PCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHF 299 (484)
T ss_pred eEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHH
Confidence 689987 69999999999999996 89999999999999999999999999999999999999766789999999999
Q ss_pred HHHHHHHhc---CceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 77 QRLKSLVHS---SGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 77 ~~~~~~~~~---ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
+++.+++++ .++++.||..+..+.|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++||
T Consensus 300 ~~v~~~i~~a~~~~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vf 379 (484)
T PLN02203 300 QRLSNLLKDPRVAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAF 379 (484)
T ss_pred HHHHHHHHHHHhCCeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEE
Confidence 999999972 47888998755568999999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|.+++.+++.++++|.|+||++..
T Consensus 380 t~d~~~a~~~~~~l~~G~V~IN~~~~ 405 (484)
T PLN02203 380 TNNEKLKRRILSETSSGSVTFNDAII 405 (484)
T ss_pred cCCHHHHHHHHHhCCcceEEECCccc
Confidence 99999999999999999999998754
|
|
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=293.82 Aligned_cols=176 Identities=20% Similarity=0.348 Sum_probs=167.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++.+++.|+| ++.+.+||++++.+.+++
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v 312 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI 312 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 468899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .+++++||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|||+
T Consensus 313 ~~~v~~a~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~ 390 (451)
T cd07146 313 ENRVEEAIAQGARVLLGNQR--QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTN 390 (451)
T ss_pred HHHHHHHHhCCCEEEeCCCc--CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECC
Confidence 88886 69999999864 4789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|.+++.+++.++++|+|+||+.+
T Consensus 391 d~~~~~~~~~~l~~G~v~iN~~~ 413 (451)
T cd07146 391 DLDTIKRLVERLDVGTVNVNEVP 413 (451)
T ss_pred CHHHHHHHHHHCCcceEEECCCC
Confidence 99999999999999999999854
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=294.93 Aligned_cols=178 Identities=22% Similarity=0.405 Sum_probs=168.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+++||.|++++++|||++++|+|+++|++++..++.|+| ++.+++||++++.+++++
T Consensus 238 ~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~ 317 (465)
T cd07098 238 PAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRL 317 (465)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||... ..++|+.||++.++++++++++||+||||++|++|+|.+||++++|.+++||++
T Consensus 318 ~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa 397 (465)
T cd07098 318 EELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGA 397 (465)
T ss_pred HHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceE
Confidence 99986 599999998542 257899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|||+|.+++.+++.++++|+|+||+++
T Consensus 398 ~i~t~d~~~~~~~~~~l~~g~v~iN~~~ 425 (465)
T cd07098 398 SVFGKDIKRARRIASQLETGMVAINDFG 425 (465)
T ss_pred EEEcCCHHHHHHHHHhCCcceEEECCCC
Confidence 9999999999999999999999999865
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-44 Score=299.52 Aligned_cols=180 Identities=28% Similarity=0.484 Sum_probs=169.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++++++.|+| ++.+++||+++..+.+++
T Consensus 241 p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~ 320 (462)
T PF00171_consen 241 PVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERV 320 (462)
T ss_dssp EEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHH
T ss_pred eeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhhhc
Confidence 6899999999999999999999999999999999999999999999999999999999999 468999999999999999
Q ss_pred HHHHh----cCceeeeCC----ccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH----SSGTIALGG----DMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg----~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ +|+++++|| .....+++++||++.++++++++++||+||||++|++|+|.+|+++++|..++||+++
T Consensus 321 ~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 400 (462)
T PF00171_consen 321 KALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTAS 400 (462)
T ss_dssp HHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCceeE
Confidence 99886 699999998 3355789999999999999999999999999999999999999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|||+|.+++.+++.++++|+|+||+++.+
T Consensus 401 v~s~d~~~~~~~~~~l~~g~v~iN~~~~~ 429 (462)
T PF00171_consen 401 VFSRDESRAERLARRLEAGRVWINDPPTG 429 (462)
T ss_dssp EECSBHHHHHHHHHHSTSSEEEESSSSTG
T ss_pred EecccccccccccccccccceeecCCccc
Confidence 99999999999999999999999998754
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-43 Score=293.88 Aligned_cols=178 Identities=22% Similarity=0.375 Sum_probs=168.9
Q ss_pred CeEEeCCC-CHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHH
Q psy11681 1 PLYIDSSV-NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~da-Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~ 78 (181)
|+||++|| |++.|++.+++++|+|+||.|++++++|||+++||+|+++|++++.++++|+|. +.+++||++++.++++
T Consensus 240 ~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 319 (462)
T cd07112 240 PNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDK 319 (462)
T ss_pred eEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHH
Confidence 68999999 999999999999999999999999999999999999999999999999999994 5899999999999999
Q ss_pred HHHHHh----cCceeeeCCccCC---CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEE
Q psy11681 79 LKSLVH----SSGTIALGGDMDA---SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~~~---~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 151 (181)
+.++++ +|+++++||.... .++++.||++.++++++++++||+||||++|++|+|.+||++++|.+++||+++
T Consensus 320 v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~ 399 (462)
T cd07112 320 VLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAAS 399 (462)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEE
Confidence 999887 5899999986532 478999999999999999999999999999999999999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|||+|.+.+.+++.++++|+|+||++.
T Consensus 400 i~t~d~~~~~~~~~~l~~g~v~iN~~~ 426 (462)
T cd07112 400 VWTSDLSRAHRVARRLRAGTVWVNCFD 426 (462)
T ss_pred EEcCCHHHHHHHHHhcCcceEEECCCC
Confidence 999999999999999999999999864
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=294.86 Aligned_cols=177 Identities=27% Similarity=0.420 Sum_probs=168.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+++||.|++++++|||+++||+|++.|++++.+++.||| ++.+++||++++.+++++
T Consensus 245 p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 324 (466)
T cd07138 245 ANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRV 324 (466)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH----SSGTIALGGDMD----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ +|+++++||... ..+++++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++
T Consensus 325 ~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 404 (466)
T cd07138 325 QGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGY 404 (466)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEE
Confidence 99886 699999998632 2588999999999999999999999999999999999999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECCc
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCINDT 177 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~~ 177 (181)
|||+|.+++.+++.++++|+|+||+.
T Consensus 405 i~t~d~~~a~~~~~~l~~G~v~iN~~ 430 (466)
T cd07138 405 VWSADPERARAVARRLRAGQVHINGA 430 (466)
T ss_pred EEcCCHHHHHHHHHhcCcceEEECCC
Confidence 99999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >KOG2451|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=277.31 Aligned_cols=178 Identities=20% Similarity=0.351 Sum_probs=169.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|.||++|||||.|++..+.++|.++||.|.+.+|+|||+++||+|++.|.++++++++||. ++.+..||+|++.+.+++
T Consensus 277 PfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kv 356 (503)
T KOG2451|consen 277 PFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKV 356 (503)
T ss_pred ceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 579999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSGTIALGGDM-DA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
..+++ +|+++++||+. .+ .++|++||++.+++.+|.+.+||+|||+.+|.+|+|.+|+++++|+++.||+.|+|
T Consensus 357 e~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvf 436 (503)
T KOG2451|consen 357 EKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVF 436 (503)
T ss_pred HHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEe
Confidence 88886 79999999983 33 45899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|+|.++..+++.+|++|.|-+|.-.
T Consensus 437 s~~~s~~~rVae~LEvGmVGvNegl 461 (503)
T KOG2451|consen 437 SNNLSRLFRVAEALEVGMVGVNEGL 461 (503)
T ss_pred ccCHHHHHHHHHHHhcceeecccce
Confidence 9999999999999999999999743
|
|
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-43 Score=292.41 Aligned_cols=179 Identities=23% Similarity=0.386 Sum_probs=169.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|.|+||.|+++++||||++++|+|+++|++++.+++.|+| ++.+.+||++++.+.+++
T Consensus 232 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~ 311 (451)
T cd07103 232 PFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKV 311 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999998 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||.... .++++.|||+.++++++.++++|+||||++|++|+|.+||++++|+.++||+++|||
T Consensus 312 ~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t 391 (451)
T cd07103 312 EALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFT 391 (451)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEC
Confidence 98876 6999999987543 688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+.+.+++.++++|+|+||++..
T Consensus 392 ~d~~~~~~~~~~l~~g~v~vN~~~~ 416 (451)
T cd07103 392 RDLARAWRVAEALEAGMVGINTGLI 416 (451)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCC
Confidence 9999999999999999999999763
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=296.47 Aligned_cols=180 Identities=24% Similarity=0.394 Sum_probs=168.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|++++.++++|+|.+..++||++++.+++++.
T Consensus 292 ~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~Gpli~~~~~~~v~ 371 (514)
T PRK03137 292 AIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAYMGPVINQASFDKIM 371 (514)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCccCcCCCCCHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999995433999999999999999
Q ss_pred HHHh---cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCc
Q psy11681 81 SLVH---SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156 (181)
Q Consensus 81 ~~~~---~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d 156 (181)
++++ +++++++||..+ ..++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+|
T Consensus 372 ~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d 451 (514)
T PRK03137 372 SYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNN 451 (514)
T ss_pred HHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 9987 357999998753 358899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCcccc
Q psy11681 157 AQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 157 ~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
.+++.+++.++++|+|+||+++++
T Consensus 452 ~~~a~~~~~~l~~G~v~IN~~~~~ 475 (514)
T PRK03137 452 REHLEKARREFHVGNLYFNRGCTG 475 (514)
T ss_pred HHHHHHHHHhCCcCeEEECCCCCC
Confidence 999999999999999999987543
|
|
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=303.46 Aligned_cols=176 Identities=20% Similarity=0.293 Sum_probs=166.4
Q ss_pred CeEEeCCCC-----HHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHH
Q psy11681 1 PLYIDSSVN-----IELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDK 74 (181)
Q Consensus 1 p~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~ 74 (181)
|+||++||| ++.|++.+++++|.|+||.|+|++|||||+++||+|+++|++++.++++|+| ++.+++||++++.
T Consensus 259 p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~ 338 (663)
T TIGR02278 259 AAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLE 338 (663)
T ss_pred eEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHH
Confidence 789999999 9999999999999999999999999999999999999999999999999999 5689999999999
Q ss_pred HHHHHHHHHh----cCceeeeCCccCCCCceeccEEEecCCCCC-CCcCcccccceeeeEEeCCHHHHHHHHhcCCCCce
Q psy11681 75 HFQRLKSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTD-PIMGEEIFGPILPIINVESAFEAIQFINARPKPLT 149 (181)
Q Consensus 75 ~~~~~~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~-~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 149 (181)
+++++.++++ +|+++++||..+..++|++||++.++++++ .+++||+||||++|++|+|.+||++++|+++|||+
T Consensus 339 ~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~ 418 (663)
T TIGR02278 339 QRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLV 418 (663)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCce
Confidence 9999998886 699999999765568999999998888775 78999999999999999999999999999999999
Q ss_pred EEEeeCcHHHHHHHHhhc--ceeeEEE-CC
Q psy11681 150 LYLFSSNAQVQELFIHQT--HSGSMCI-ND 176 (181)
Q Consensus 150 ~~i~s~d~~~~~~~~~~~--~~g~v~i-N~ 176 (181)
+||||+|.+.+.+++.++ ++|+|+| |.
T Consensus 419 a~vft~d~~~~~~~~~~l~~~~G~v~InN~ 448 (663)
T TIGR02278 419 ATLATSDPEEARQFILGLAPYHGRLHILNR 448 (663)
T ss_pred EEEEeCCHHHHHHHHHHHHhhCCEEEECCC
Confidence 999999999999999999 7999999 64
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=295.71 Aligned_cols=178 Identities=17% Similarity=0.278 Sum_probs=166.0
Q ss_pred CeEEeCCCC-----HHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHH
Q psy11681 1 PLYIDSSVN-----IELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDK 74 (181)
Q Consensus 1 p~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~ 74 (181)
|+||++||| ++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+| ++.+++||++++.
T Consensus 259 p~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~ 338 (513)
T cd07128 259 AAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSRE 338 (513)
T ss_pred cEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHH
Confidence 789999999 9999999999999999999999999999999999999999999999999999 5688999999999
Q ss_pred HHHHHHHHHh---cCceeeeCCccC--------CCCceeccEEEecCCC--CCCCcCcccccceeeeEEeCCHHHHHHHH
Q psy11681 75 HFQRLKSLVH---SSGTIALGGDMD--------ASDRFISPTILVDVKP--TDPIMGEEIFGPILPIINVESAFEAIQFI 141 (181)
Q Consensus 75 ~~~~~~~~~~---~ga~~~~gg~~~--------~~~~~~~Pti~~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 141 (181)
+++++.++++ +++++++||... ..++|++||++.++++ ++.+++||+||||++|++|+|.+|+++++
T Consensus 339 ~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~a 418 (513)
T cd07128 339 QREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELA 418 (513)
T ss_pred HHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHH
Confidence 9999999987 349999998642 2588999999988876 47899999999999999999999999999
Q ss_pred hcCCCCceEEEeeCcHHHHHHHHhhcc--eeeEEECCcc
Q psy11681 142 NARPKPLTLYLFSSNAQVQELFIHQTH--SGSMCINDTV 178 (181)
Q Consensus 142 n~~~~gl~~~i~s~d~~~~~~~~~~~~--~g~v~iN~~~ 178 (181)
|+++|||++||||+|.+++.+++++++ +|+|+||+..
T Consensus 419 N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~ 457 (513)
T cd07128 419 ARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRD 457 (513)
T ss_pred hcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCc
Confidence 999999999999999999999999997 9999999864
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=293.83 Aligned_cols=180 Identities=22% Similarity=0.372 Sum_probs=168.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++.++++|+|. +.+++||++++.+++++
T Consensus 275 ~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v 354 (500)
T cd07083 275 AIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKV 354 (500)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999994 57899999999999999
Q ss_pred HHHHh---cCceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeC--CHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH---SSGTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVE--SAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~---~ga~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ .++++++||..+. .++|+.||++.++++++.+++||+||||++|++|+ |.+||++++|.++|||+++||
T Consensus 355 ~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~ 434 (500)
T cd07083 355 LSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVY 434 (500)
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEE
Confidence 99987 2458999987543 57899999999999999999999999999999999 999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|+|.+++.+++.++++|+|+||+++++
T Consensus 435 t~d~~~~~~~~~~l~~g~v~iN~~~~~ 461 (500)
T cd07083 435 SRKREHLEEARREFHVGNLYINRKITG 461 (500)
T ss_pred eCCHHHHHHHHHhCCeeEEEECCCCCC
Confidence 999999999999999999999987653
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-43 Score=293.67 Aligned_cols=178 Identities=22% Similarity=0.339 Sum_probs=167.7
Q ss_pred CeEEeCCC-CHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHH
Q psy11681 1 PLYIDSSV-NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~da-Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~ 78 (181)
|+||.+|+ |++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.+++.|+| ++.+.+||++++.++++
T Consensus 273 ~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 352 (494)
T PRK09847 273 ANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADS 352 (494)
T ss_pred eeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHH
Confidence 67899997 99999999999999999999999999999999999999999999999999999 46889999999999999
Q ss_pred HHHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 79 LKSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
+.++++ +| ++++||.....+.|+.||++.++++++++++||+||||++|++|+|.+||++++|++++||+++|||
T Consensus 353 v~~~v~~a~~~G-~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t 431 (494)
T PRK09847 353 VHSFIREGESKG-QLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWT 431 (494)
T ss_pred HHHHHHHHHHCC-eEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEc
Confidence 999986 46 9999987655678999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+++.+++.++++|+|+||++..
T Consensus 432 ~d~~~a~~~~~~l~~G~v~iN~~~~ 456 (494)
T PRK09847 432 RDLSRAHRMSRRLKAGSVFVNNYND 456 (494)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCC
Confidence 9999999999999999999998643
|
|
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=294.85 Aligned_cols=178 Identities=22% Similarity=0.281 Sum_probs=167.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|+|++++|||++++|+|+++|++++.++++|+|. +.+.+||++++.+++++
T Consensus 285 p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 364 (518)
T cd07125 285 AMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLL 364 (518)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999995 58999999999999999
Q ss_pred HHHHh---cCceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeC--CHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH---SSGTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVE--SAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~---~ga~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ .++++++||..+. .++|+.||++.++ ++.+++||+||||++|++|+ |.+||++++|.++|||+++||
T Consensus 365 ~~~i~~a~~~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vf 442 (518)
T cd07125 365 RAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIH 442 (518)
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEE
Confidence 99987 3678998886543 6899999999777 88999999999999999999 999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|+|.+.+.+++.++++|+|+||++.++
T Consensus 443 t~d~~~~~~~~~~l~~G~V~IN~~~~~ 469 (518)
T cd07125 443 SRDEREIEYWRERVEAGNLYINRNITG 469 (518)
T ss_pred eCCHHHHHHHHHhCCcCeEEECCCCCC
Confidence 999999999999999999999987653
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-43 Score=289.86 Aligned_cols=176 Identities=26% Similarity=0.450 Sum_probs=167.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||+++||+|+++|++++.+++.| .+++||++++.+++++.
T Consensus 216 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g----~~~~gp~i~~~~~~~~~ 291 (432)
T cd07105 216 PAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG----PVVLGSLVSAAAADRVK 291 (432)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC----CCcccccCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999877 67999999999999999
Q ss_pred HHHh----cCceeeeCCccC--CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 81 SLVH----SSGTIALGGDMD--ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~~~--~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
++++ +|+++++||... ..++++.||++.++++++.+++||+||||++|++|+|.+||++++|.+++||+++|||
T Consensus 292 ~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t 371 (432)
T cd07105 292 ELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFT 371 (432)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEc
Confidence 9986 589999998754 3588999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+|.+++.+++.++++|+|+||++..+
T Consensus 372 ~d~~~~~~~~~~l~~g~v~vN~~~~~ 397 (432)
T cd07105 372 RDLARALAVAKRIESGAVHINGMTVH 397 (432)
T ss_pred CCHHHHHHHHHhCCcCeEEECCCCCC
Confidence 99999999999999999999997654
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=292.82 Aligned_cols=179 Identities=24% Similarity=0.334 Sum_probs=166.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccH-HHHHHHHHHHhhcccccCC--CCCccccccccHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQ-AQILNQAKAVLDSWYTEQV--QGSKHYCRIVSDKHFQ 77 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~-d~f~~~l~~~~~~~~~g~~--~~~~~~g~l~~~~~~~ 77 (181)
|+||++|||++.|++.+++++|+|+||.|+++++||||++++ |+|+++|++.+.+++.|+| ++.+.+||+++..+++
T Consensus 247 p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~ 326 (484)
T TIGR03240 247 PLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQ 326 (484)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHH
Confidence 789999999999999999999999999999999999999985 9999999999999999996 4578899999999999
Q ss_pred HHHHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 78 RLKSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 78 ~~~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
++.++++ +|+++++||.. +..+.|++||++ ++++++.+++||+||||++|++|+|.+||++++|+++|||+++|
T Consensus 327 ~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v 405 (484)
T TIGR03240 327 RLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGL 405 (484)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEE
Confidence 9998875 69999998764 345789999998 68889999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
||+|.+++.+++.++++|+|+||+...+
T Consensus 406 ~t~d~~~a~~~~~~l~aG~v~iN~~~~~ 433 (484)
T TIGR03240 406 LSDDRELYDRFLLEIRAGIVNWNKPLTG 433 (484)
T ss_pred EcCCHHHHHHHHHhCCcceEEEECCCCC
Confidence 9999999999999999999999987643
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=289.71 Aligned_cols=180 Identities=21% Similarity=0.384 Sum_probs=169.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.++++|+| ++.+++||++++.+.+++
T Consensus 232 ~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 311 (455)
T cd07093 232 PNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKV 311 (455)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 458899999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-----CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMDA-----SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-----~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||.... .+.++.||++.++++++++++||+||||++|++|+|.+||++++|+.++||++
T Consensus 312 ~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~ 391 (455)
T cd07093 312 LGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAA 391 (455)
T ss_pred HHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceE
Confidence 98876 5999999986532 47899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+|||+|.+++.+++.++++|+|+||++..+
T Consensus 392 ~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~ 421 (455)
T cd07093 392 YVWTRDLGRAHRVARRLEAGTVWVNCWLVR 421 (455)
T ss_pred EEECCCHHHHHHHHHhCCcceEEECCCCCC
Confidence 999999999999999999999999997653
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=289.73 Aligned_cols=177 Identities=24% Similarity=0.396 Sum_probs=168.3
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+++||.|++++++|||++++|+|+++|++++.+++.|+| ++++.+||++++.+.+++
T Consensus 236 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 315 (453)
T cd07149 236 AVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERI 315 (453)
T ss_pred eEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 458899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .++++.||++.++++++.+++||+||||++|++|+|.+||++++|..++||+++|||+
T Consensus 316 ~~~i~~a~~~ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~ 393 (453)
T cd07149 316 EEWVEEAVEGGARLLTGGKR--DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTN 393 (453)
T ss_pred HHHHHHHHHCCCEEEeCCCC--CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcC
Confidence 99886 58999999865 4789999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|.+++.+++.++++|+|+||+++.
T Consensus 394 d~~~~~~~~~~l~~g~v~iN~~~~ 417 (453)
T cd07149 394 DLQKALKAARELEVGGVMINDSST 417 (453)
T ss_pred CHHHHHHHHHHcCcCeEEECCCCC
Confidence 999999999999999999998753
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=287.53 Aligned_cols=178 Identities=48% Similarity=0.933 Sum_probs=169.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|++.+.+++.++|.+.+++||+++..+.+++.
T Consensus 212 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~ 291 (426)
T cd07087 212 PCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLA 291 (426)
T ss_pred ceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999888888889999999999999999
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
++++. +++++||..+..++++.||++.++++++++++||+||||++|++|+|.+||++++|+.+|||+++|||+|.+++
T Consensus 292 ~~i~~-a~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 370 (426)
T cd07087 292 SLLDD-GKVVIGGQVDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQ 370 (426)
T ss_pred HHHhc-ceEEeCCccCCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99984 48999987655688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCccc
Q psy11681 161 ELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~ 179 (181)
.++++++++|+|+||+++.
T Consensus 371 ~~~~~~l~~g~v~iN~~~~ 389 (426)
T cd07087 371 ERVLAETSSGGVCVNDVLL 389 (426)
T ss_pred HHHHhcCCcccEEECCccc
Confidence 9999999999999998753
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=292.11 Aligned_cols=178 Identities=15% Similarity=0.244 Sum_probs=164.5
Q ss_pred CeEEeCCCC-----HHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHH
Q psy11681 1 PLYIDSSVN-----IELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDK 74 (181)
Q Consensus 1 p~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~ 74 (181)
|+||++||| ++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|++++.++++|+|. +.+++||+++..
T Consensus 263 p~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~ 342 (521)
T PRK11903 263 SALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRA 342 (521)
T ss_pred ceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHH
Confidence 789999999 59999999999999999999999999999999999999999999999999994 588999999999
Q ss_pred HHHHHHHHHh---cCceeeeCCccC-------CCCceeccEEEecCCC--CCCCcCcccccceeeeEEeCCHHHHHHHHh
Q psy11681 75 HFQRLKSLVH---SSGTIALGGDMD-------ASDRFISPTILVDVKP--TDPIMGEEIFGPILPIINVESAFEAIQFIN 142 (181)
Q Consensus 75 ~~~~~~~~~~---~ga~~~~gg~~~-------~~~~~~~Pti~~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 142 (181)
+++++.++++ +|+++++||... ..++|++||++.++++ ++.+++||+||||++|++|+|.+|+++++|
T Consensus 343 ~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N 422 (521)
T PRK11903 343 QLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALAR 422 (521)
T ss_pred HHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHh
Confidence 9999999886 699999998641 2478999999976543 468889999999999999999999999999
Q ss_pred cCCCCceEEEeeCcHHHHHHHHhhc--ceeeEEECCcc
Q psy11681 143 ARPKPLTLYLFSSNAQVQELFIHQT--HSGSMCINDTV 178 (181)
Q Consensus 143 ~~~~gl~~~i~s~d~~~~~~~~~~~--~~g~v~iN~~~ 178 (181)
+++|||++||||+|..++.+++.++ ++|+|+||+..
T Consensus 423 ~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~ 460 (521)
T PRK11903 423 RGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPD 460 (521)
T ss_pred cCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcc
Confidence 9999999999999999999999999 89999999753
|
|
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=300.35 Aligned_cols=177 Identities=18% Similarity=0.295 Sum_probs=165.0
Q ss_pred CeEEeCCCC-----HHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHH
Q psy11681 1 PLYIDSSVN-----IELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDK 74 (181)
Q Consensus 1 p~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~ 74 (181)
|+||++||| ++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|+++++++++|+| ++.+++||++++.
T Consensus 263 p~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~ 342 (675)
T PRK11563 263 AAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLE 342 (675)
T ss_pred ceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHH
Confidence 789999995 9999999999999999999999999999999999999999999999999999 5689999999999
Q ss_pred HHHHHHHHHh---cCceeeeCCccC--------CCCceeccEEEecCCC--CCCCcCcccccceeeeEEeCCHHHHHHHH
Q psy11681 75 HFQRLKSLVH---SSGTIALGGDMD--------ASDRFISPTILVDVKP--TDPIMGEEIFGPILPIINVESAFEAIQFI 141 (181)
Q Consensus 75 ~~~~~~~~~~---~ga~~~~gg~~~--------~~~~~~~Pti~~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 141 (181)
+++++.++++ +.+++++||... ..|+|++|||+.++++ ++.+++||+||||++|++|+|.+||++++
T Consensus 343 ~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~a 422 (675)
T PRK11563 343 QREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELA 422 (675)
T ss_pred HHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHH
Confidence 9999998886 249999998521 3588999999998888 57899999999999999999999999999
Q ss_pred hcCCCCceEEEeeCcHHHHHHHHhhcc--eeeEEECCc
Q psy11681 142 NARPKPLTLYLFSSNAQVQELFIHQTH--SGSMCINDT 177 (181)
Q Consensus 142 n~~~~gl~~~i~s~d~~~~~~~~~~~~--~g~v~iN~~ 177 (181)
|+++|||++||||+|.+++.+++++++ +|+|+||+.
T Consensus 423 N~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~ 460 (675)
T PRK11563 423 ARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNR 460 (675)
T ss_pred hcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCc
Confidence 999999999999999999999999997 999999974
|
|
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=288.15 Aligned_cols=177 Identities=20% Similarity=0.314 Sum_probs=167.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++ |+|+++|+++++++++|+| ++.+++||++++.+.+++
T Consensus 250 ~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~ 328 (477)
T TIGR01722 250 HMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRV 328 (477)
T ss_pred ceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHH
Confidence 68999999999999999999999999999999999999999 9999999999999999999 568899999999999999
Q ss_pred HHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||... ..+.|+.||++.++++++.+++||+||||++|++|+|.+||++++|+++|||++
T Consensus 329 ~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~ 408 (477)
T TIGR01722 329 ASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGT 408 (477)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeE
Confidence 99976 699999998641 257899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|||+|.+.+.+++.++++|.|+||++.
T Consensus 409 ~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 436 (477)
T TIGR01722 409 AIFTRDGAAARRFQHEIEVGQVGVNVPI 436 (477)
T ss_pred EEEcCCHHHHHHHHHhCCeeeEEECCCC
Confidence 9999999999999999999999999854
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >KOG2456|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-43 Score=276.24 Aligned_cols=181 Identities=50% Similarity=0.952 Sum_probs=176.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|++|++++|++-|+++|+|+++.|+||.|.|+++|+++.+++.+++++++..++.+++.++.++.+++.++++.|++|+.
T Consensus 216 P~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~ 295 (477)
T KOG2456|consen 216 PCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLS 295 (477)
T ss_pred CeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
++++...+++.||..++...+++|||+.++++++++|+||+|||||+|+.+++.+|+++.+|..+.+|++|+||+|.+.+
T Consensus 296 ~ll~~~~kv~~Gg~~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~v 375 (477)
T KOG2456|consen 296 ALLDETGKVAIGGESDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLV 375 (477)
T ss_pred HHhcCCCceecCCccchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHH
Confidence 99996589999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCccccC
Q psy11681 161 ELFIHQTHSGSMCINDTVMHY 181 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~~~ 181 (181)
.++..++.+|.|.+|+..+|+
T Consensus 376 kr~l~~tsSGgvt~ND~i~H~ 396 (477)
T KOG2456|consen 376 KRFLTETSSGGVTVNDVIMHV 396 (477)
T ss_pred HHHHHhccCCCeeecceEEEE
Confidence 999999999999999998874
|
|
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-42 Score=286.98 Aligned_cols=176 Identities=16% Similarity=0.258 Sum_probs=162.5
Q ss_pred CeEEeCC------CCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccH
Q psy11681 1 PLYIDSS------VNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSD 73 (181)
Q Consensus 1 p~iV~~d------aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~ 73 (181)
|+||++| ||++.|++.++++ ++|+||.|++++|||||+++||+|+++|++++.+++.|+| ++.+.+||++++
T Consensus 250 p~iV~~da~~~~~adl~~A~~~i~~~-~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~ 328 (479)
T cd07116 250 PNIFFADVMDADDAFFDKALEGFVMF-ALNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASL 328 (479)
T ss_pred eEEEecCcccccccCHHHHHHHHHHH-HhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCH
Confidence 6788887 7999999999986 4699999999999999999999999999999999999999 468899999999
Q ss_pred HHHHHHHHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcC
Q psy11681 74 KHFQRLKSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINAR 144 (181)
Q Consensus 74 ~~~~~~~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 144 (181)
.+++++.++++ +|+++++||... ..+.|+.||++.+++ ++.+++||+||||++|++|+|.+||++++|++
T Consensus 329 ~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~ 407 (479)
T cd07116 329 EQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDT 407 (479)
T ss_pred HHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCC
Confidence 99999999886 589999998643 257899999998764 89999999999999999999999999999999
Q ss_pred CCCceEEEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 145 PKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 145 ~~gl~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|||+++|||+|.+++.+++.++++|+|+||++.
T Consensus 408 ~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~ 441 (479)
T cd07116 408 LYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYH 441 (479)
T ss_pred cccceEEEEcCCHHHHHHHHHhcCcCeEEECCCC
Confidence 9999999999999999999999999999999754
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=285.01 Aligned_cols=178 Identities=24% Similarity=0.360 Sum_probs=168.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.+++.+++.|+|. +.+.+||+++..+++++
T Consensus 254 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~ 333 (473)
T cd07082 254 PAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFV 333 (473)
T ss_pred eEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999985 57899999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||... .++++.||++.++++++++++||+||||++|++|+|.+||++++|++++||+++|||+
T Consensus 334 ~~~~~~a~~~ga~~~~gg~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 412 (473)
T cd07082 334 EGLIDDAVAKGATVLNGGGRE-GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTK 412 (473)
T ss_pred HHHHHHHHHCCCEEEeCCccC-CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeC
Confidence 88875 699999998754 3889999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|.+.+.+++.++++|+|+||+++.
T Consensus 413 d~~~~~~~~~~l~~G~v~iN~~~~ 436 (473)
T cd07082 413 DINKARKLADALEVGTVNINSKCQ 436 (473)
T ss_pred CHHHHHHHHHhCCcceEEECCCCC
Confidence 999999999999999999999764
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-41 Score=282.59 Aligned_cols=178 Identities=19% Similarity=0.224 Sum_probs=162.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++.++++|+| ++.+++||++++.+++++
T Consensus 278 p~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~ 357 (500)
T TIGR01238 278 AMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNL 357 (500)
T ss_pred cEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCceeeeCCc---c-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeC--CHHHHHHHHhcCCCCce
Q psy11681 80 KSLVH----SSGTIALGGD---M-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVE--SAFEAIQFINARPKPLT 149 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~---~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~ 149 (181)
.++++ .|++++.++. . ...++|++||++.. +++.+++||+||||++|++|+ +.+||++++|.+++||+
T Consensus 358 ~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs 435 (500)
T TIGR01238 358 LAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLT 435 (500)
T ss_pred HHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCe
Confidence 98886 5787764322 1 23589999999963 678899999999999999998 79999999999999999
Q ss_pred EEEeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 150 LYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 150 ~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
++|||+|.+.+.+++.++++|+|+||+...+
T Consensus 436 ~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~ 466 (500)
T TIGR01238 436 MGVHSRIETTYRWIEKHARVGNCYVNRNQVG 466 (500)
T ss_pred EEEEeCCHHHHHHHHHhCCcceEEECCCCCC
Confidence 9999999999999999999999999987643
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=296.71 Aligned_cols=178 Identities=19% Similarity=0.270 Sum_probs=165.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|.++||.|+|++++|||+++||+|+++|++++.++++|+|. ..+++||++++.+++++
T Consensus 802 a~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l 881 (1038)
T PRK11904 802 AMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANL 881 (1038)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999994 68999999999999999
Q ss_pred HHHHh---cCceeeeCCccCC---CCceeccEEEecCCCCCCCcCcccccceeeeEEeC--CHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH---SSGTIALGGDMDA---SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVE--SAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~---~ga~~~~gg~~~~---~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ +|+++++||..++ .|+|+.||++. .+++.+++||+||||++|++|+ +++|+++++|.++||||++
T Consensus 882 ~~~I~~a~~ga~vl~gg~~~~~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~ 959 (1038)
T PRK11904 882 DAHIERMKREARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLG 959 (1038)
T ss_pred HHHHHHHHcCCEEEeCCCCCCCCCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEE
Confidence 99987 5899999987543 48999999985 3566789999999999999998 6999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|||+|.+.+.+++.++++|+||||+..++
T Consensus 960 IfS~d~~~~~~~~~~l~aG~vyIN~~~~g 988 (1038)
T PRK11904 960 IHSRIEETADRIADRVRVGNVYVNRNQIG 988 (1038)
T ss_pred EEcCCHHHHHHHHHhCCEEEEEEeCCCcc
Confidence 99999999999999999999999987654
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=278.03 Aligned_cols=176 Identities=16% Similarity=0.300 Sum_probs=158.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccc---------cHHHHHHHHHHHhhcccccCC-CCCcccccc
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQ---------VQAQILNQAKAVLDSWYTEQV-QGSKHYCRI 70 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~---------~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l 70 (181)
|+||++|||++.|++.+++|+|.|+||.|++++|+|||++ +||+|+++|++++.++ .||| ++.+.+||+
T Consensus 311 p~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gpl 389 (551)
T TIGR02288 311 TVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGAI 389 (551)
T ss_pred eEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccccCc
Confidence 6899999999999999999999999999999999999999 7999999999999999 8998 457899999
Q ss_pred ccHHHHHHHHHHHhcCceeeeCCccC---C-CC-ceeccEEEecCC-CCCCCcCcccccceeeeEEeCCHHHHHHHHhcC
Q psy11681 71 VSDKHFQRLKSLVHSSGTIALGGDMD---A-SD-RFISPTILVDVK-PTDPIMGEEIFGPILPIINVESAFEAIQFINAR 144 (181)
Q Consensus 71 ~~~~~~~~~~~~~~~ga~~~~gg~~~---~-~~-~~~~Pti~~~~~-~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 144 (181)
+++.+++++.+.+++| +++.||... . .+ ++++|||+. ++ ++|++++||+||||++|++|+|.+||++++|++
T Consensus 390 is~~~~~ri~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~-~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~ 467 (551)
T TIGR02288 390 QSPDTLARIAEARALG-EVLLASTKIEHPEFPGARVRTPLLLK-CDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRS 467 (551)
T ss_pred CCHHHHHHHHHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEE-cCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcC
Confidence 9999999998888877 666666432 1 34 588999984 55 489999999999999999999999999999997
Q ss_pred --CCC-ceEEEeeCcHHHHHHHHhhc----------ceeeEEECCccc
Q psy11681 145 --PKP-LTLYLFSSNAQVQELFIHQT----------HSGSMCINDTVM 179 (181)
Q Consensus 145 --~~g-l~~~i~s~d~~~~~~~~~~~----------~~g~v~iN~~~~ 179 (181)
++| |+++|||+|.+++.++..++ ++|.|+||++..
T Consensus 468 ~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~ 515 (551)
T TIGR02288 468 VREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAA 515 (551)
T ss_pred CCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCC
Confidence 566 99999999999999999999 999999999643
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=271.76 Aligned_cols=180 Identities=24% Similarity=0.426 Sum_probs=170.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|+|++.|++.+++++|.++||.|++++++|||++++|+|+++|++++.+++.|+| ++++++||++++.+.+++
T Consensus 211 ~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~ 290 (432)
T cd07078 211 PLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRV 290 (432)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 678999999999999999
Q ss_pred HHHHh----cCceeeeCCccCC--CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSGTIALGGDMDA--SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~--~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +|+++++||..+. .+.+++||++.++++++.++++|+||||++|++|++.+|+++++|+.++||+++||
T Consensus 291 ~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~ 370 (432)
T cd07078 291 LAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVF 370 (432)
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEE
Confidence 98886 5899999987554 48899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|+|.+.+.+++.++++|+|+||+++.+
T Consensus 371 t~d~~~~~~~~~~~~~g~v~iN~~~~~ 397 (432)
T cd07078 371 TRDLERALRVAERLEAGTVWINDYSVG 397 (432)
T ss_pred CCCHHHHHHHHHhcCcceEEECCCCCC
Confidence 999999999999999999999998765
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=273.25 Aligned_cols=173 Identities=12% Similarity=0.197 Sum_probs=161.8
Q ss_pred CeEEeCCC-CHHHHHHHHHHHhchhcCCccccCCEEEEccc-cHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHH
Q psy11681 1 PLYIDSSV-NIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~da-Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~-~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 78 (181)
|+||++|| |++.|++.+++++|.|+||.|++++++|||++ ++|+|+++|++.+.++++| ++.+||++++...++
T Consensus 213 ~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g----~~~~gpl~~~~~~~~ 288 (442)
T cd07084 213 WKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE----DLLLGPVQTFTTLAM 288 (442)
T ss_pred cEEECCChhhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC----ccccChhhhHHHHHH
Confidence 78999999 69999999999999999999999999999999 9999999999999999887 679999999988888
Q ss_pred HHHHHhc-CceeeeCCccC-------CCCceeccEEEecCCCCC---CCcCcccccceeeeEEeCC--HHHHHHHHhcCC
Q psy11681 79 LKSLVHS-SGTIALGGDMD-------ASDRFISPTILVDVKPTD---PIMGEEIFGPILPIINVES--AFEAIQFINARP 145 (181)
Q Consensus 79 ~~~~~~~-ga~~~~gg~~~-------~~~~~~~Pti~~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~ 145 (181)
+.+.+++ |+++++||... ..|+|++||++.++++++ .+++||+||||++|++|+| .+|+++++|.++
T Consensus 289 i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~ 368 (442)
T cd07084 289 IAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMH 368 (442)
T ss_pred HHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCC
Confidence 8888887 48999998642 147899999999998887 9999999999999999999 999999999999
Q ss_pred CCceEEEeeCcHHHHHHHHhhc-ceeeEEECCc
Q psy11681 146 KPLTLYLFSSNAQVQELFIHQT-HSGSMCINDT 177 (181)
Q Consensus 146 ~gl~~~i~s~d~~~~~~~~~~~-~~g~v~iN~~ 177 (181)
+||+++|||+|.+.+.+++.++ ++|+||||+.
T Consensus 369 ~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~ 401 (442)
T cd07084 369 GSLTAAIYSNDPIFLQELIGNLWVAGRTYAILR 401 (442)
T ss_pred CCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCC
Confidence 9999999999999999999999 9999999976
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=269.43 Aligned_cols=175 Identities=17% Similarity=0.210 Sum_probs=156.0
Q ss_pred CeEEeCCC-CHHHHHHHHHHHhchhcCCccccCCEEEEcccc-HHHHHHHHHHHhhcccccCCCCCccccccccHHHHHH
Q psy11681 1 PLYIDSSV-NIELAVRRFLWGKCINAGQTCIAPDYILCSRQV-QAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~da-Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~-~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 78 (181)
|+||++|| |++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.+.+++.|+ +.+||+++.. .++
T Consensus 253 ~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~----~~~Gpli~~~-~~~ 327 (489)
T cd07126 253 WKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED----LTIGPVLTWT-TER 327 (489)
T ss_pred ceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC----CcCCCCcCHH-HHH
Confidence 68999999 999999999999999999999999999999995 6899999999999998764 4899999887 777
Q ss_pred HHHHHh-----cCceeeeCCccCC-----CC-ceeccEEEec------CCCCCCCcCcccccceeeeEEeCC--HHHHHH
Q psy11681 79 LKSLVH-----SSGTIALGGDMDA-----SD-RFISPTILVD------VKPTDPIMGEEIFGPILPIINVES--AFEAIQ 139 (181)
Q Consensus 79 ~~~~~~-----~ga~~~~gg~~~~-----~~-~~~~Pti~~~------~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~ 139 (181)
+.++++ +|+++++||..+. .+ .|++||++.. ++++|.+++||+||||++|++|+| .+||++
T Consensus 328 v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~ 407 (489)
T cd07126 328 ILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLE 407 (489)
T ss_pred HHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHH
Confidence 777664 5999999997532 22 3899999842 567899999999999999999999 999999
Q ss_pred HHhcCCCCceEEEeeCcHHHHHHHHhhcceee--EEECCcccc
Q psy11681 140 FINARPKPLTLYLFSSNAQVQELFIHQTHSGS--MCINDTVMH 180 (181)
Q Consensus 140 ~~n~~~~gl~~~i~s~d~~~~~~~~~~~~~g~--v~iN~~~~~ 180 (181)
++|+++|||++||||+|.+++.+++.++++|+ |+||+.+++
T Consensus 408 ~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~ 450 (489)
T cd07126 408 ALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTG 450 (489)
T ss_pred HHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCC
Confidence 99999999999999999999999999999999 669987654
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=289.14 Aligned_cols=178 Identities=19% Similarity=0.254 Sum_probs=164.3
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|.++||.|++.+++|||++++|+|++.|++++..+++|||. .++++||++++.+.+++
T Consensus 889 a~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i 968 (1318)
T PRK11809 889 AMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANI 968 (1318)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999995 58999999999999999
Q ss_pred HHHHh----cCceeeeCCccC----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeC--CHHHHHHHHhcCCCCce
Q psy11681 80 KSLVH----SSGTIALGGDMD----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVE--SAFEAIQFINARPKPLT 149 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~ 149 (181)
.++++ +|++++.|+... ..|+|+.|||+.. +++..+++|+||||++|++|+ +++|+|+++|.++||||
T Consensus 969 ~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt 1046 (1318)
T PRK11809 969 ERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLT 1046 (1318)
T ss_pred HHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCce
Confidence 98886 588888876532 3589999999963 457789999999999999997 79999999999999999
Q ss_pred EEEeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 150 LYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 150 ~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
++|||+|.+.+.+++.++++|+||||...++
T Consensus 1047 ~gV~Srd~~~~~~v~~~l~aGnvyINr~~~g 1077 (1318)
T PRK11809 1047 LGVHTRIDETIAQVTGSAHVGNLYVNRNMVG 1077 (1318)
T ss_pred EEEEeCCHHHHHHHHHhCCEeEEEECCCCcC
Confidence 9999999999999999999999999987654
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=267.37 Aligned_cols=174 Identities=18% Similarity=0.266 Sum_probs=155.8
Q ss_pred CeEEeCCC---CHHHHHHHHHHHhchhcCCccccCCEEEEccc-cHHHHHHHHHHHhhcccccCCCCCccccccccHHHH
Q psy11681 1 PLYIDSSV---NIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHF 76 (181)
Q Consensus 1 p~iV~~da---Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~-~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~ 76 (181)
|+||++|| |++.|++.+++|+|.|+||.|+|++|+|||++ ++|+|+++|++++++++.| +.++|.+.....
T Consensus 228 ~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g-----~~~~~~~~~~~~ 302 (454)
T cd07129 228 PVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ-----TMLTPGIAEAYR 302 (454)
T ss_pred cEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC-----CCcChHHHHHHH
Confidence 68999999 89999999999999999999999999999999 9999999999999998765 345556666666
Q ss_pred HHHHHHHhc-CceeeeCCccCCCCceeccEEEecCC---CCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 77 QRLKSLVHS-SGTIALGGDMDASDRFISPTILVDVK---PTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 77 ~~~~~~~~~-ga~~~~gg~~~~~~~~~~Pti~~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
+.+.+.+++ |+++++||.....++|++||++...+ +++++++||+||||++|++|+|.+|+++++|.+++||+++|
T Consensus 303 ~~i~~a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v 382 (454)
T cd07129 303 QGVEALAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATI 382 (454)
T ss_pred HHHHHHHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEE
Confidence 667777777 99999999754568999999997554 68899999999999999999999999999999999999999
Q ss_pred eeCc--HHHHHHHHhhc--ceeeEEECCccc
Q psy11681 153 FSSN--AQVQELFIHQT--HSGSMCINDTVM 179 (181)
Q Consensus 153 ~s~d--~~~~~~~~~~~--~~g~v~iN~~~~ 179 (181)
||+| .+.+.+++.++ ++|+|+||+++.
T Consensus 383 ft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~ 413 (454)
T cd07129 383 HGEEDDLALARELLPVLERKAGRLLFNGWPT 413 (454)
T ss_pred EccCchHHHHHHHHHHHHhhCcEEEECCCCc
Confidence 9999 79999999999 699999997653
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=288.88 Aligned_cols=178 Identities=19% Similarity=0.246 Sum_probs=163.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|.++||.|+|++++|||++++|+|+++|++++.++++|||. ..+++||++++.+++++
T Consensus 794 ~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i 873 (1208)
T PRK11905 794 AMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANI 873 (1208)
T ss_pred eEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999995 58899999999999999
Q ss_pred HHHHh----cCceeeeCCccC--CCCceeccEEEecCCCCCCCcCcccccceeeeEEeC--CHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH----SSGTIALGGDMD--ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVE--SAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~--~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ +|+.++.|+... ..|+|+.||++. + +++.++++|+||||++|++|+ +++|+++++|.++||||++
T Consensus 874 ~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~ 951 (1208)
T PRK11905 874 EAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFG 951 (1208)
T ss_pred HHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEE
Confidence 99987 466666665332 358999999986 3 567789999999999999997 6999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|||+|.+.+.+++.++++|+||||+..++
T Consensus 952 I~S~d~~~~~~~~~~l~aGnvyIN~~~~g 980 (1208)
T PRK11905 952 LHSRIDETIAHVTSRIRAGNIYVNRNIIG 980 (1208)
T ss_pred EEcCCHHHHHHHHHhCCEeEEEECCCCCC
Confidence 99999999999999999999999987654
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=266.05 Aligned_cols=164 Identities=15% Similarity=0.210 Sum_probs=148.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|+|+||.|++.+|+|||+++||+|+++|++++ ||+++..+.+++.
T Consensus 210 p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~--------------gpli~~~~~~~v~ 275 (439)
T cd07081 210 PVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG--------------AYKLTAEELQQVQ 275 (439)
T ss_pred eEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC--------------CccCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999998864 7899999999999
Q ss_pred HHHh----cCceeeeCCc-c--CCCCceeccE---EEecCC--CCCCCcCcccccceeeeEEeCCHHHHHHHHhcC----
Q psy11681 81 SLVH----SSGTIALGGD-M--DASDRFISPT---ILVDVK--PTDPIMGEEIFGPILPIINVESAFEAIQFINAR---- 144 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~-~--~~~~~~~~Pt---i~~~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~---- 144 (181)
++++ +|++++.|+. . ...|.++.|+ ++.+++ ++|++++||+||||++|++|+|++||++++|+.
T Consensus 276 ~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~ 355 (439)
T cd07081 276 PVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEG 355 (439)
T ss_pred HHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhcc
Confidence 9997 4776653332 1 1247889998 888877 899999999999999999999999999999965
Q ss_pred CCCceEEEeeCc---HHHHHHHHhhcceeeEEECCcc
Q psy11681 145 PKPLTLYLFSSN---AQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 145 ~~gl~~~i~s~d---~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|||+++|||+| .+++.+++.++++|+|+||++.
T Consensus 356 ~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~ 392 (439)
T cd07081 356 GCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPC 392 (439)
T ss_pred CCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCc
Confidence 799999999999 9999999999999999999876
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=265.08 Aligned_cols=164 Identities=21% Similarity=0.314 Sum_probs=148.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||+++|++.+++++|+|+||.|+|++|+|||+++||+|+++|+++ .. ++++..+.+++.
T Consensus 212 p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~~-------------~~i~~~~~~~v~ 277 (429)
T cd07121 212 PVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-GA-------------YVLNDEQAEQLL 277 (429)
T ss_pred eEEEecCCCHHHHHHHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-CC-------------EEcCHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999886 22 268899999999
Q ss_pred HHHh---c---CceeeeCCcc----CCCCceec---cEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCC
Q psy11681 81 SLVH---S---SGTIALGGDM----DASDRFIS---PTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKP 147 (181)
Q Consensus 81 ~~~~---~---ga~~~~gg~~----~~~~~~~~---Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 147 (181)
++++ + |++++.||.. ...|.++. ||++.++++++++++||+||||++|++|+|++||++++|.++||
T Consensus 278 ~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~G 357 (429)
T cd07121 278 EVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHG 357 (429)
T ss_pred HhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccC
Confidence 9986 2 4788888753 12466766 59999999999999999999999999999999999999999998
Q ss_pred c--eEEEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 148 L--TLYLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 148 l--~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
| +++|||+|.+++.+++.++++|+||||++.
T Consensus 358 Lghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~ 390 (429)
T cd07121 358 NRHTAIIHSKNVENLTKMARAMQTTIFVKNGPS 390 (429)
T ss_pred CCceEEEecCCHHHHHHHHhhCCceEEEEcCCC
Confidence 8 999999999999999999999999999764
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=263.14 Aligned_cols=164 Identities=18% Similarity=0.314 Sum_probs=146.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++|+|+|+||.|+|++++|||+++||+|+++|+++. +++++..+++++.
T Consensus 244 p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~--------------~~li~~~~~~~v~ 309 (465)
T PRK15398 244 PVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG--------------AVLLTAEQAEKLQ 309 (465)
T ss_pred eEEEecCCCHHHHHHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC--------------CccCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999998862 1589999999999
Q ss_pred HHHhc----CceeeeCCcc----CCCCcee---ccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCc-
Q psy11681 81 SLVHS----SGTIALGGDM----DASDRFI---SPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPL- 148 (181)
Q Consensus 81 ~~~~~----ga~~~~gg~~----~~~~~~~---~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl- 148 (181)
+++.+ +++++.||.. ...|.++ +||++.++++++++++||+||||++|++|+|++||++++|+++|||
T Consensus 310 ~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~ 389 (465)
T PRK15398 310 KVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNR 389 (465)
T ss_pred HHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCc
Confidence 99973 3366666532 1235555 4789999999999999999999999999999999999999999988
Q ss_pred -eEEEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 149 -TLYLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 149 -~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+++|||+|.+++.++++++++|+|+||++.
T Consensus 390 hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~ 420 (465)
T PRK15398 390 HTAIMHSRNVDNLNKMARAIQTSIFVKNGPS 420 (465)
T ss_pred ceEEEecCCHHHHHHHHHhCCceEEEECCCC
Confidence 999999999999999999999999999764
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=263.46 Aligned_cols=173 Identities=20% Similarity=0.343 Sum_probs=153.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccc---------cHHHHHHHHHHHhhcccccCCC-CCcccccc
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQ---------VQAQILNQAKAVLDSWYTEQVQ-GSKHYCRI 70 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~---------~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l 70 (181)
|+||++|||++.+++.+++|+|.++||.|++++|+|||++ +||+|++.|+++++++ .|||. ..+.+||+
T Consensus 311 ~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpl 389 (549)
T cd07127 311 TVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAI 389 (549)
T ss_pred eEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCc
Confidence 6899999999999999999999999999999999999999 8999999999999999 88884 58899999
Q ss_pred ccHHHHHHHHHHHhcCceeeeCCccCC----CC-ceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcC-
Q psy11681 71 VSDKHFQRLKSLVHSSGTIALGGDMDA----SD-RFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINAR- 144 (181)
Q Consensus 71 ~~~~~~~~~~~~~~~ga~~~~gg~~~~----~~-~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~- 144 (181)
+++.+++++.+.++.|+ +++||.... .+ .++.|||+...++++++++||+||||++|++|+|.+|+++++|+.
T Consensus 390 i~~~~~~ri~~a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~ 468 (549)
T cd07127 390 QSPDTLARIAEARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESV 468 (549)
T ss_pred CCHHHHHHHHHHHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcc
Confidence 99999999999888665 778775421 34 456999998888899999999999999999999999999999997
Q ss_pred -CC-CceEEEeeCcHHHHHHHHhhcc-ee-eEEEC
Q psy11681 145 -PK-PLTLYLFSSNAQVQELFIHQTH-SG-SMCIN 175 (181)
Q Consensus 145 -~~-gl~~~i~s~d~~~~~~~~~~~~-~g-~v~iN 175 (181)
++ ||+++|||+|.+.++++...+. +| .++||
T Consensus 469 ~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN 503 (549)
T cd07127 469 REHGAMTVGVYSTDPEVVERVQEAALDAGVALSIN 503 (549)
T ss_pred cCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEc
Confidence 34 5999999999999999998844 33 66666
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=261.33 Aligned_cols=165 Identities=19% Similarity=0.241 Sum_probs=151.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHH-------hhcccccCC-C-CCccccccc
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAV-------LDSWYTEQV-Q-GSKHYCRIV 71 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~-------~~~~~~g~~-~-~~~~~g~l~ 71 (181)
|+||++|||++.|++.+++|+|+|+||.|+|.+++|||+++||+|+++|+++ .+.++.|+| . +.+++||++
T Consensus 219 p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i 298 (488)
T TIGR02518 219 PAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQI 298 (488)
T ss_pred eEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCccc
Confidence 7899999999999999999999999999999999999999999999999998 788888886 3 678999999
Q ss_pred cHHHHHHHHHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhc----
Q psy11681 72 SDKHFQRLKSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINA---- 143 (181)
Q Consensus 72 ~~~~~~~~~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~---- 143 (181)
+..+.+++.++++ +|+++++||.. .+++++++ ++|+||||++|++|+|++||++++|+
T Consensus 299 ~~~~~~~i~~~i~~av~~gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~ 364 (488)
T TIGR02518 299 VGKSPQVIANLAGLTVPEDAKVLIGEQN-------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQN 364 (488)
T ss_pred ccchHHHHHHHhccccCCCCEEEEeCCC-------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhc
Confidence 9999999999987 69999999852 24667775 79999999999999999999999887
Q ss_pred CCCCceEEEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 144 RPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 144 ~~~gl~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
.++|||++|||+|.+++.+++.++++|+|+||++..
T Consensus 365 ~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~~ 400 (488)
T TIGR02518 365 EGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGGS 400 (488)
T ss_pred CCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCc
Confidence 689999999999999999999999999999997653
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=253.96 Aligned_cols=165 Identities=18% Similarity=0.288 Sum_probs=145.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcc-------cccCC--CCCccccccc
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSW-------YTEQV--QGSKHYCRIV 71 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~-------~~g~~--~~~~~~g~l~ 71 (181)
|+||++|||++.|++.+++|+|+|+||.|++++|+|||+++||+|+++|+++...+ +++++ ++.+.+||++
T Consensus 210 p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~ 289 (436)
T cd07122 210 PAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDI 289 (436)
T ss_pred eEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccc
Confidence 78999999999999999999999999999999999999999999999999999887 66776 3466799999
Q ss_pred cHHHHHHHHHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcC---
Q psy11681 72 SDKHFQRLKSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINAR--- 144 (181)
Q Consensus 72 ~~~~~~~~~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--- 144 (181)
+..+.+++.++++ +|++++.++ +.+++++|++. +|.||||++|++|+|.+||++++|++
T Consensus 290 ~~~~~~~~~~~~~~~~~~ga~vl~~~-------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~ 355 (436)
T cd07122 290 VGKSAQKIAELAGIEVPEDTKVLVAE-------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEY 355 (436)
T ss_pred cCcCHHHHHHHcCCCCCCCCeEEEEe-------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhc
Confidence 8888877766544 345555443 35778888877 56799999999999999999999986
Q ss_pred -CCCceEEEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 145 -PKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 145 -~~gl~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|||+++|||+|.+++.++++++++|+||||+++.
T Consensus 356 ~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~ 391 (436)
T cd07122 356 GGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSS 391 (436)
T ss_pred cCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCcc
Confidence 79999999999999999999999999999998864
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >KOG2454|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-36 Score=235.07 Aligned_cols=180 Identities=23% Similarity=0.388 Sum_probs=169.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|.||++|||++..+.-++++.|..+||.|+...|++||+++||.|+..|.+++..++.|.| ....+||++++..+++.+
T Consensus 306 afIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhL 385 (583)
T KOG2454|consen 306 AFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHL 385 (583)
T ss_pred cEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHH
Confidence 5799999999999999999999999999999999999999999999999999999999988 568999999999999988
Q ss_pred HHHHh----cCceeeeCCcc-----CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDM-----DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-----~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
+++++ +|++++.||.+ ...|.+++||++.+++++|++.+||.||||++++++++.+++++++|+.++||.+
T Consensus 386 esLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~ 465 (583)
T KOG2454|consen 386 ESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGC 465 (583)
T ss_pred HHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccc
Confidence 88876 79999999973 3468899999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
++|+.|.++..+++.++++|.|.||+...+
T Consensus 466 sVFg~dk~~c~y~a~~lqtG~vAiNDFasf 495 (583)
T KOG2454|consen 466 SVFGGDKHRCKYIASQLQTGVVAINDFASF 495 (583)
T ss_pred eeccccHHHHHHHHhhhhccceeehhhhhh
Confidence 999999999999999999999999997653
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=243.13 Aligned_cols=142 Identities=23% Similarity=0.288 Sum_probs=128.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++|+|.|+| .|++++|+|||+++||+|+++|++++..+
T Consensus 224 p~IV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~------------------------ 278 (406)
T cd07079 224 HVYVDESADLEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREA------------------------ 278 (406)
T ss_pred eEEEeCCCCHHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC------------------------
Confidence 78999999999999999999999999 99999999999999999999999877753
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
|++++.|+.. ..+++|+ +++++++++||+||||++|++|+|++||++++|+++|||+++|||+|.+++
T Consensus 279 -----ga~~~~g~~~---~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a 346 (406)
T cd07079 279 -----GVELRGDEET---LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETA 346 (406)
T ss_pred -----CCEEecCHHH---HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHH
Confidence 5665433221 1367787 688899999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCccc
Q psy11681 161 ELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~ 179 (181)
.++++++++|+|+||+++.
T Consensus 347 ~~~~~~~~~G~v~iN~~~~ 365 (406)
T cd07079 347 ERFLREVDSAAVYVNASTR 365 (406)
T ss_pred HHHHHhCCeeEEEEeCCCc
Confidence 9999999999999998754
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=238.68 Aligned_cols=142 Identities=21% Similarity=0.302 Sum_probs=125.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++|+|.|+| .|++++|+|||+++||+|+++|+++++++..+
T Consensus 230 p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------- 287 (417)
T PRK00197 230 HIYVDESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE--------------------- 287 (417)
T ss_pred eEEEeCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe---------------------
Confidence 78999999999999999999999999 99999999999999999999999999877422
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
++ |+... .+ + .||++ ++++.+++||+||||++|++|+|.+||++++|+++|||+++|||+|.+++
T Consensus 288 --------~~-~~~~~-~~-~-~PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~ 352 (417)
T PRK00197 288 --------LR-GDEAA-LA-L-LPDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAA 352 (417)
T ss_pred --------Ee-cCHHH-HH-h-hcccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHH
Confidence 12 11100 11 2 39997 45789999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCccc
Q psy11681 161 ELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~ 179 (181)
++++.++++|+|+||++..
T Consensus 353 ~~~~~~l~~G~v~VN~~~~ 371 (417)
T PRK00197 353 ERFLNEVDSAAVYVNASTR 371 (417)
T ss_pred HHHHHhCCeeEEEEeCCCc
Confidence 9999999999999998754
|
|
| >KOG2455|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=226.72 Aligned_cols=178 Identities=26% Similarity=0.418 Sum_probs=164.7
Q ss_pred EEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CC-CccccccccHHHHHHHH
Q psy11681 3 YIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QG-SKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 3 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~-~~~~g~l~~~~~~~~~~ 80 (181)
+|+++||++.++...++|+|..+||.|++.+|+||+++++..+.++|.+.-+++++||| .+ ++.+||+|....+.|+.
T Consensus 319 fVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~ 398 (561)
T KOG2455|consen 319 FVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLK 398 (561)
T ss_pred EeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999998 44 88999999999999999
Q ss_pred HHHh-----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCC--HHHHHHHHhc-CCCCceEE
Q psy11681 81 SLVH-----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVES--AFEAIQFINA-RPKPLTLY 151 (181)
Q Consensus 81 ~~~~-----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~-~~~gl~~~ 151 (181)
++++ ...++++||+.+ ..|+|+.|||+..-+|.++++.||+|||||+|+.|+| ++|+++++.+ ++||||.+
T Consensus 399 k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGa 478 (561)
T KOG2455|consen 399 KVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGA 478 (561)
T ss_pred HHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccc
Confidence 9998 246789999865 5799999999998899999999999999999999985 8999999854 79999999
Q ss_pred EeeCcHHHHHHHHhhcc--eeeEEECCcccc
Q psy11681 152 LFSSNAQVQELFIHQTH--SGSMCINDTVMH 180 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~--~g~v~iN~~~~~ 180 (181)
||++|.+.+.+..++++ +|+.|||+-+++
T Consensus 479 iFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTG 509 (561)
T KOG2455|consen 479 IFAQDREVVLHALDVLRMAAGNFYINDKCTG 509 (561)
T ss_pred cccccHHHHHHHHHHHHhhhcceEEcccccc
Confidence 99999999999998776 999999998765
|
|
| >KOG2452|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=228.37 Aligned_cols=178 Identities=17% Similarity=0.259 Sum_probs=169.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|.||+.|||+++|++....+.|++.|..|++..|+||.+++.|+|++++.++..++++|+|. .+++.||....+|..++
T Consensus 658 p~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl 737 (881)
T KOG2452|consen 658 PFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKL 737 (881)
T ss_pred ceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999995 58999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeC--CHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVE--SAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i 152 (181)
.+|++ .|+++.+||+. +++|.|++||++.++.+++.+..||.||||..|.+|+ |.++.++.+|++++||++++
T Consensus 738 ~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gv 817 (881)
T KOG2452|consen 738 MEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGV 817 (881)
T ss_pred HHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccce
Confidence 99987 58999999975 5689999999999999999999999999999999997 58999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|..++.+++..+.+|+|+||.+.
T Consensus 818 ftrd~~k~l~v~~~l~agtvfvnty~ 843 (881)
T KOG2452|consen 818 FTRDINKALYVSDKLQAGTVFVNTYN 843 (881)
T ss_pred eecccchhhhhhhhhccceEEEeecc
Confidence 99999999999999999999999864
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=246.52 Aligned_cols=164 Identities=14% Similarity=0.276 Sum_probs=143.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++|+|+|+||.|+|+++||||+++||+|+++|+++. +|+++..+++++.
T Consensus 223 p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g--------------~~l~~~~~~~~v~ 288 (862)
T PRK13805 223 PAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG--------------AYFLNKKELKKLE 288 (862)
T ss_pred eEEEeCCCCHHHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC--------------CeeCCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999998863 4689999999999
Q ss_pred HHHhc----Ccee-eeCCccC----CCCceeccEE------EecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhc--
Q psy11681 81 SLVHS----SGTI-ALGGDMD----ASDRFISPTI------LVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINA-- 143 (181)
Q Consensus 81 ~~~~~----ga~~-~~gg~~~----~~~~~~~Pti------~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-- 143 (181)
+++++ +.+. +.||... ..|.++.|++ +.++++++++++ |+||||++|++|+|++||++++|+
T Consensus 289 ~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~ 367 (862)
T PRK13805 289 KFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLV 367 (862)
T ss_pred HHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHH
Confidence 99973 2221 4455321 2377888886 567888999776 799999999999999999999987
Q ss_pred --CCCCceEEEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 144 --RPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 144 --~~~gl~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
.++||+++|||+|.+++.++++++++|+|+||.+..
T Consensus 368 ~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~ 405 (862)
T PRK13805 368 EFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSS 405 (862)
T ss_pred hcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCcc
Confidence 479999999999999999999999999999999863
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=225.33 Aligned_cols=146 Identities=20% Similarity=0.152 Sum_probs=124.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++|+|.+ ||.|++++|+|||+++||+|+++|++.+..+.. .+++ .+.+.
T Consensus 218 p~iV~~dADl~~Aa~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~-------~~~~------~~~i~ 283 (398)
T TIGR00407 218 HIYLDESADLIKAIKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV-------TIHA------DAYAL 283 (398)
T ss_pred eEEEeCCCCHHHHHHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC-------EEec------CHHHH
Confidence 789999999999999999999965 999999999999999999999999999887632 1211 13444
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
+++..| | ||++ +++ +.+++||+||||++|++|+|++||++++|+.++||+++|||+|.+++
T Consensus 284 ~~v~~g------~----------~tv~-~~~--~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a 344 (398)
T TIGR00407 284 KLLELG------P----------ATEA-IVC--KTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANA 344 (398)
T ss_pred HHHhcc------C----------cccc-ccc--cccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHH
Confidence 454421 1 3443 233 68899999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCccc
Q psy11681 161 ELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~ 179 (181)
.++++++++|+|+||+++.
T Consensus 345 ~~~a~~i~~G~v~iN~~~~ 363 (398)
T TIGR00407 345 EQFQNGVDSAAVYHNASTR 363 (398)
T ss_pred HHHHHhCCeeEEEEeCCCC
Confidence 9999999999999999764
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=218.23 Aligned_cols=140 Identities=15% Similarity=0.155 Sum_probs=125.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|+| ||.|++++++|||+++||+|+++|++++..
T Consensus 215 ~~iv~~dad~~~a~~~~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~------------------------- 268 (397)
T cd07077 215 PVVVDETADEERASGSVHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV------------------------- 268 (397)
T ss_pred eEEEcCCCCHHHHHHHHHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh-------------------------
Confidence 689999999999999999999999 999999999999999999999999888764
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHH----HHHHHHhcCCCCceEEEeeCc
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAF----EAIQFINARPKPLTLYLFSSN 156 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~~i~s~d 156 (181)
+|++++.||. +.++.|| +++.+.+||+||||+++++|+|.+ +|++++|+.+|||+++|||+|
T Consensus 269 ----~G~~~~~g~~----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d 334 (397)
T cd07077 269 ----EGLKVPQETK----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHK 334 (397)
T ss_pred ----cCcCcCCCce----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCC
Confidence 3777777763 3566665 678889999999999999999996 566678999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCcccc
Q psy11681 157 AQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 157 ~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
.+++.+++.++++|+|+||++..+
T Consensus 335 ~~~~~~~~~~l~~G~v~vN~~~~~ 358 (397)
T cd07077 335 INKVDDFVQYIDTASFYPNESSKK 358 (397)
T ss_pred HHHHHHHHHhCCEEEEEEeCCccC
Confidence 999999999999999999998765
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >KOG2453|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=207.74 Aligned_cols=178 Identities=22% Similarity=0.369 Sum_probs=163.4
Q ss_pred eEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHHH
Q psy11681 2 LYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 2 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~~ 80 (181)
.||.+|||+..+++..++++.-.+||.|+..+|+++|+++||+.+++|++...++++|+|. +.+.+||+-++....+..
T Consensus 272 iiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~ 351 (507)
T KOG2453|consen 272 IIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFK 351 (507)
T ss_pred EEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999995 588999999998877665
Q ss_pred HHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 81 SLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.-++ +|++++.||+. +.+|+|+.|||++ +..+.++..+|.|.|||+|.+|++++||+.+-|..+-||+.+|||+
T Consensus 352 ~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~ 430 (507)
T KOG2453|consen 352 ASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTT 430 (507)
T ss_pred HHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhc
Confidence 5554 69999999985 6689999999996 8889999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHh--hcceeeEEECCcccc
Q psy11681 156 NAQVQELFIH--QTHSGSMCINDTVMH 180 (181)
Q Consensus 156 d~~~~~~~~~--~~~~g~v~iN~~~~~ 180 (181)
|.+.+-++.. ..++|.|.||=++.+
T Consensus 431 n~~nifrw~gpkgsdcgivnvniptsg 457 (507)
T KOG2453|consen 431 NIQNIFRWMGPKGSDCGIVNVNIPTSG 457 (507)
T ss_pred CHHHHHhhhCCCCCccceEEecCCCCc
Confidence 9999999886 456999999987653
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=224.79 Aligned_cols=140 Identities=20% Similarity=0.291 Sum_probs=121.3
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.| ||.|++.+|+|||+++||+ |++ ..-+.
T Consensus 517 p~iV~~DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~-----------------------G~~-----~~~i~ 567 (718)
T PLN02418 517 HVYVDKSADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN-----------------------GGL-----NDLLV 567 (718)
T ss_pred eEEEeCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc-----------------------ccH-----HHHHH
Confidence 789999999999999999999999 9999999999999999997 111 22234
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
+.+++|+++ +||.... + ++. + +++++++||+|||+++|.+|+|.+|||+++|+++|||+++|||+|..++
T Consensus 568 ~a~~~Ga~l-~Gg~~~~-g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a 637 (718)
T PLN02418 568 ALRSAGVTL-YGGPRAS-K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVA 637 (718)
T ss_pred HHHHCCCEE-ECCcccc-C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHH
Confidence 445579999 6775322 3 232 3 7799999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCccc
Q psy11681 161 ELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~ 179 (181)
.++++++++|.||||+++.
T Consensus 638 ~~~a~~l~aG~V~IN~~~~ 656 (718)
T PLN02418 638 EIFLRQVDSAAVFHNASTR 656 (718)
T ss_pred HHHHHhCCeeEEEEeCCCC
Confidence 9999999999999998754
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=217.09 Aligned_cols=140 Identities=19% Similarity=0.282 Sum_probs=114.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.++.++ +++||.|+|++|+|||+++||+ | .+.++.
T Consensus 509 p~iV~~dADl~~A~~~i~~~~-~~~GQ~C~a~~rvlV~~~i~d~------------------------~-----~~~~~v 558 (715)
T TIGR01092 509 HVYVDKSASVDMAKRIVRDAK-CDYPAACNAMETLLVHKDLLRN------------------------G-----LLDDLI 558 (715)
T ss_pred eEEECCCCCHHHHHHHHHHHh-CCCCCccccCcEEEEehhhccc------------------------h-----hHHHHH
Confidence 799999999999986666665 5559999999999999999985 0 022222
Q ss_pred H-HHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHH
Q psy11681 81 S-LVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQV 159 (181)
Q Consensus 81 ~-~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~ 159 (181)
+ ..++|++++ ||...+ .++. + .++++++++||+||||++|++|+|++||++++|+++|||++||||+|.+.
T Consensus 559 ~~~~~~Ga~l~-Gg~~~~--~~~~---~--~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~ 630 (715)
T TIGR01092 559 DMLRTEGVTIH-GGPRFA--AYLT---F--NISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENV 630 (715)
T ss_pred HHHHHCCCEEE-CCcchh--heec---c--CCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHH
Confidence 2 223688875 774321 2332 1 25688999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCcc
Q psy11681 160 QELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 160 ~~~~~~~~~~g~v~iN~~~ 178 (181)
+.+++.++++|.|+||+++
T Consensus 631 a~~~~~~i~sG~V~vN~~~ 649 (715)
T TIGR01092 631 AEFFLQHVDSAAVFHNAST 649 (715)
T ss_pred HHHHHHhCCeeEEEEeCCC
Confidence 9999999999999999864
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=201.50 Aligned_cols=126 Identities=32% Similarity=0.549 Sum_probs=119.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|+|++.|++.++++++.++||.|+++++||||++++|+|+++|+
T Consensus 207 ~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~l~------------------------------ 256 (367)
T cd06534 207 PVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKLV------------------------------ 256 (367)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHhhc------------------------------
Confidence 68999999999999999999999999999999999999999999999986
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
|++.+++++++++++|+|||+++|++|++.+|+++++|+.++||+++|||+|...+
T Consensus 257 ------------------------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 312 (367)
T cd06534 257 ------------------------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRA 312 (367)
T ss_pred ------------------------eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHH
Confidence 66667788889999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCcccc
Q psy11681 161 ELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~~ 180 (181)
.+++..+++|+|+||+++.+
T Consensus 313 ~~~~~~~~~g~v~iN~~~~~ 332 (367)
T cd06534 313 LRVAERLRAGTVYINDSSIG 332 (367)
T ss_pred HHHHHhCCcceEEECCCCCC
Confidence 99999999999999998764
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=199.69 Aligned_cols=178 Identities=20% Similarity=0.311 Sum_probs=156.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCC-CccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQG-SKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~-~~~~g~l~~~~~~~~~ 79 (181)
.||||++|--++.+..++.|+|..+||.|++.+.+++++++.|..++.|+-.|..+++|+|+. .+++||+|+.+....+
T Consensus 354 AMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i 433 (769)
T COG4230 354 AMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANI 433 (769)
T ss_pred eEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999999999965 8999999999999999
Q ss_pred HHHHh---cCceeee-CCccC--CCCceeccEEEecCCCCCCCcCcccccceeeeEEeC--CHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH---SSGTIAL-GGDMD--ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVE--SAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~---~ga~~~~-gg~~~--~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ .-++.+. -.... ..|.|+.||++. +.. ..-++.|+|||||+|++|+ ++++.++-+|.++||||.+
T Consensus 434 ~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~E-l~~-~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~G 511 (769)
T COG4230 434 EKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE-LEN-LDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLG 511 (769)
T ss_pred HHHHHHHHhcccchhhccCCCccCCceeeCceeEE-cCC-HHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeee
Confidence 99987 1233322 21111 469999999994 332 3347899999999999997 6899999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|||+-++.+.++..++++|++|||...++
T Consensus 512 vHtRideti~~v~~~~~aGNlYVNRN~vG 540 (769)
T COG4230 512 VHTRIDETIAHVTERAHAGNLYVNRNIVG 540 (769)
T ss_pred eecchHHHHHHHHhhccccceEeecccee
Confidence 99999999999999999999999987654
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.2e-16 Score=116.95 Aligned_cols=162 Identities=9% Similarity=0.121 Sum_probs=130.2
Q ss_pred eEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHHH
Q psy11681 2 LYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLKS 81 (181)
Q Consensus 2 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 81 (181)
+||+++.|++.|+..++.+.-...| ..+...|+|||+++|+|+++++.+++.+... +.++..+.|..+
T Consensus 8 MIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~~~----------va~Hpny~rsl~ 75 (215)
T PF07368_consen 8 MIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLSPQ----------VANHPNYLRSLK 75 (215)
T ss_pred EEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCChh----------hccCcHHHHHHH
Confidence 6899999999999999999766555 5677789999999999999999999877421 446677888777
Q ss_pred HHh-cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcC--CCCceEEEeeCcHH
Q psy11681 82 LVH-SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINAR--PKPLTLYLFSSNAQ 158 (181)
Q Consensus 82 ~~~-~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~gl~~~i~s~d~~ 158 (181)
.++ -+++++.++.. .....-.|.++.+.+.. .+... -.+|+++..|++.+||++++++. ++ -+++||++...
T Consensus 76 ~i~~l~~~~I~~~~~-~~~~~aSPilV~d~~h~--~fg~~-PTgViTlhtFRt~~Ea~~l~~kE~l~f-~SVsiW~ekla 150 (215)
T PF07368_consen 76 KIKCLNAKTIVADFE-NVPPPASPILVCDFTHS--YFGDG-PTGVITLHTFRTPKEAIELCAKETLPF-DSVSIWNEKLA 150 (215)
T ss_pred HHHhcCCeEEEeccc-CCCCCCCCEEEcCCCHH--HcCCC-CCeEEEEEccCCHHHHHHHHhcCCCCc-ceEEEeCcHHH
Confidence 777 48888887432 12334579999876643 23442 34699999999999999999875 44 49999999999
Q ss_pred HHHHHHhhcceeeEEECCcccc
Q psy11681 159 VQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 159 ~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
.+..++.++.+..++||+....
T Consensus 151 ~~Yel~~~l~~~~f~iNC~~V~ 172 (215)
T PF07368_consen 151 SAYELAARLPCDTFYINCFNVD 172 (215)
T ss_pred HHHHHHHhCCCCEEEEEeccCC
Confidence 9999999999999999998653
|
The function of this family is unknown. |
| >KOG2449|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-14 Score=98.13 Aligned_cols=129 Identities=26% Similarity=0.323 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHHHHHHhcCceeeeCCcc-----CCCCceeccEEEecCCCCCC
Q psy11681 42 QAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDM-----DASDRFISPTILVDVKPTDP 115 (181)
Q Consensus 42 ~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~~~~~~~ga~~~~gg~~-----~~~~~~~~Pti~~~~~~~~~ 115 (181)
...+.+.|++....|++-+. .+.++. .+...|+.++++. .....|.. -+.++|..|+++. ++|.|.
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS--~~~~~~r~~yl~~ya~~~f~~~tiLs-vtP~ms 79 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQS--EDPLDGRFIYLPGYAEGNFVGPTILS-VTPNMS 79 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcC--cCccCCceEEeeccccCCcccceEEE-ecCCcc
Confidence 45677888888888776554 345554 5566788888873 12222221 2468899999997 999999
Q ss_pred CcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 116 IMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 116 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
.+.||+||||+....-.+++++|.++|+.+||....|||.+.+.++++.+..++|.|-+|-+.
T Consensus 80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~i 142 (157)
T KOG2449|consen 80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPI 142 (157)
T ss_pred eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccc
Confidence 999999999999999999999999999999999999999999999999999999999999753
|
|
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.7e-14 Score=112.79 Aligned_cols=143 Identities=19% Similarity=0.262 Sum_probs=115.0
Q ss_pred eEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHHH
Q psy11681 2 LYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLKS 81 (181)
Q Consensus 2 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 81 (181)
++|+++||+++|.+-++.+++...+ .|.+...++||+.+.++|+..|.+.+...
T Consensus 230 iyvd~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~------------------------- 283 (417)
T COG0014 230 IYVDESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA------------------------- 283 (417)
T ss_pred EEecccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc-------------------------
Confidence 6899999999999999999999877 79999999999999999999998877632
Q ss_pred HHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHHH
Q psy11681 82 LVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQE 161 (181)
Q Consensus 82 ~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~~ 161 (181)
|.++.+.... .-+-|..- .+....-|.+|...+++.|..+++.++||+.+|..+.+||-+|-|+|...++
T Consensus 284 ----gvelr~d~~~----~~~~~~~~--~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~ 353 (417)
T COG0014 284 ----GVELRGDAEA----LALLPDAV--KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAE 353 (417)
T ss_pred ----CeEEEcCHHH----HHhccccC--CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHH
Confidence 2222221110 00000000 1112222788999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCcccc
Q psy11681 162 LFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 162 ~~~~~~~~g~v~iN~~~~~ 180 (181)
+|...+.+..||||.++.+
T Consensus 354 ~F~~~VDSAaVyvNASTRF 372 (417)
T COG0014 354 RFVNEVDSAAVYVNASTRF 372 (417)
T ss_pred HHHhhcchheEEEeccccc
Confidence 9999999999999998764
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-10 Score=96.76 Aligned_cols=148 Identities=11% Similarity=0.076 Sum_probs=96.5
Q ss_pred eEEeCCC----CHHHHHHHHHHHhchhcCCccccCCEEEEcccc---HHHHHHHHHHHhhcccccCCCCCccccccccHH
Q psy11681 2 LYIDSSV----NIELAVRRFLWGKCINAGQTCIAPDYILCSRQV---QAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDK 74 (181)
Q Consensus 2 ~iV~~da----Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~---~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~ 74 (181)
+|+++++ |++.+++.++++++.++||.|+|++++|||+++ +++|.++|.++++++....|... + +..
T Consensus 229 ~vi~~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~~-----~-~~~ 302 (422)
T cd07080 229 AVIDREALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPALS-----L-SAA 302 (422)
T ss_pred EEecHHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCCC-----C-CHH
Confidence 5666778 999999999999999999999999999999999 99999999999998753322111 1 222
Q ss_pred HHHHHHHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 75 HFQRLKSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 75 ~~~~~~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
...++...-. .+.+....+ ..+ -+++.+.... +.. -..+=.+.|.++++.+|++..++. +=.|+
T Consensus 303 ~~~~~~~~r~~~~~~~~~~~~~~---~~~----~~v~~~~~~~--~~~-~~~~r~v~v~~v~~l~~~l~~~~~--~lQTv 370 (422)
T cd07080 303 ESAKIARARLEAEFYELKGGVSR---DLG----WTVIISDEIG--LEA-SPLNRTVNVKPVASLDDVLRPVTP--YLQTV 370 (422)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC---CCC----eEEEEeCCCC--ccC-CCCcCEEEEEEcchHHHHHHhhhh--hccee
Confidence 2222211111 111111111 111 2233222211 111 233457889999999999999985 55799
Q ss_pred EEeeCcHHHHHHHHhhcc
Q psy11681 151 YLFSSNAQVQELFIHQTH 168 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~ 168 (181)
+++..+.+. .+++..+.
T Consensus 371 g~~~~~~~~-~~~~~~l~ 387 (422)
T cd07080 371 GLAPSPAEL-AELADALA 387 (422)
T ss_pred EeecChhhH-HHHHHHHH
Confidence 999988876 55555554
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >KOG4165|consensus | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.1e-09 Score=84.61 Aligned_cols=141 Identities=20% Similarity=0.263 Sum_probs=104.2
Q ss_pred eEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccH-HHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 2 LYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQ-AQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 2 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~-d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
++|++|||+++|-+-+..+++.+. -.|.+...+++|++.. ..|.+.+...+..
T Consensus 225 vYvd~dad~~kA~riv~DaK~dYP-AaCNAmETLLIh~dl~~~~~~~~l~~~l~~------------------------- 278 (433)
T KOG4165|consen 225 VYVDKDADLDKAKRIVRDAKCDYP-AACNAMETLLIHKDLEQSPFFDDLINMLKE------------------------- 278 (433)
T ss_pred EEeccccCHHHHHHHHhcccCCCc-hhhhhHHHHhccHhhhhcchHHHHHHHHHh-------------------------
Confidence 789999999999888888886654 4799999999999732 3333333222221
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
.|.++.+|.+...-.. +. +++..-+..|.-.-.+++-.+++.++|++.++..+.+||-.|.|+|...+
T Consensus 279 ----~gVtl~agpkl~~~l~-~~-------p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~A 346 (433)
T KOG4165|consen 279 ----EGVTLHAGPKLAALLK-FS-------PPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATA 346 (433)
T ss_pred ----cCeEEecChhHHhhcC-cC-------CchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHH
Confidence 1334443332111111 11 33334467788778899999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCcccc
Q psy11681 161 ELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~~ 180 (181)
+.|.+.+.+..|++|.++.+
T Consensus 347 e~Fl~~VDSa~vf~NASTRF 366 (433)
T KOG4165|consen 347 EHFLKHVDSACVFHNASTRF 366 (433)
T ss_pred HHHHhccchhheeecccccc
Confidence 99999999999999988754
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00016 Score=60.09 Aligned_cols=153 Identities=17% Similarity=0.209 Sum_probs=90.1
Q ss_pred eEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEc---cccHHHHHHHHHHHhhcccccCCCCCcccc---ccccHHH
Q psy11681 2 LYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCS---RQVQAQILNQAKAVLDSWYTEQVQGSKHYC---RIVSDKH 75 (181)
Q Consensus 2 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~---~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g---~l~~~~~ 75 (181)
.+|+.+++++.+++.++.-.+...+|.|.|++.+|++ +.-.++|.++|.+.+++....-|....... .+.....
T Consensus 204 avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~~s~~~~~~~~~~r~ 283 (399)
T PF05893_consen 204 AVIDAEAELEEAARRLANDIFLFDQQACSSPQVIFVETGDGDSVEEFAERLAEALERAAERYPRGELSIDEAAAISSLRA 283 (399)
T ss_pred EEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHH
Confidence 4677888999999999999999999999999999999 344577888887777754321121111110 0111111
Q ss_pred HHHHHHHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 76 FQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 76 ~~~~~~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
..++...+..+.++..+.. + .-+++....+ . .....++=.+.|.++++.+|++..++....=.|++++..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~----~---~~~V~~~~~~--~-~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~ 353 (399)
T PF05893_consen 284 EAELRYALDGEYRVWSSDD----N---SWTVIVSPEP--P-LLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPW 353 (399)
T ss_pred HHHHHHHhcCCcceeecCC----C---CEEEEECCCc--c-cccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecC
Confidence 1122223332334442211 1 2334432221 1 222333448899999999999999987643248888765
Q ss_pred cHHHHHHHHh
Q psy11681 156 NAQVQELFIH 165 (181)
Q Consensus 156 d~~~~~~~~~ 165 (181)
. .....++.
T Consensus 354 ~-~~~~~~~~ 362 (399)
T PF05893_consen 354 S-ERLEELAR 362 (399)
T ss_pred h-hhHHHHHH
Confidence 4 33444444
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2450|consensus | Back alignment and domain information |
|---|
Probab=87.32 E-value=0.22 Score=42.22 Aligned_cols=138 Identities=7% Similarity=0.058 Sum_probs=84.4
Q ss_pred EccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHHHHHhcCceeeeCCccCCCCceeccEEEecCCCCCCC
Q psy11681 37 CSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPI 116 (181)
Q Consensus 37 v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~ 116 (181)
|++...++.=++++++-..+..++. ..+++.-...-+.++.++++++...++.....+.|..+.++...+++...+.
T Consensus 52 v~~~~~~dVd~aV~aAr~Af~~~~W---~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~ 128 (501)
T KOG2450|consen 52 VAEATEEDVDEAVKAARSAFKLVDW---AKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDC 128 (501)
T ss_pred eccccHHHHHHHHHHHHHhcCcCcc---ccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhH
Confidence 4444555554445444333332111 1233334445556677777788888887776667778888886677766655
Q ss_pred cCccccccee---eeEEeCCHHHHHHHHhcCCCCceEEEeeCc---HHHHHHHHhhcceeeEEECCccc
Q psy11681 117 MGEEIFGPIL---PIINVESAFEAIQFINARPKPLTLYLFSSN---AQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 117 ~~~E~fgPvl---~v~~~~~~~eai~~~n~~~~gl~~~i~s~d---~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
++ .|++.. ......+..+...+.+..+.|-...|--.| .-.+++++..|.+|+++|+.+.-
T Consensus 129 ~r--y~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae 195 (501)
T KOG2450|consen 129 FR--YYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAE 195 (501)
T ss_pred HH--hhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCC
Confidence 54 334433 233445556666777778888544444444 34677899999999999998753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 181 | ||||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 3e-51 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 7e-51 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 5e-26 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 8e-25 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 1e-11 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-11 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 8e-11 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 8e-11 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 9e-11 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 2e-10 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-10 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 3e-10 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 6e-10 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-09 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-09 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 2e-09 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 4e-09 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 9e-09 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-08 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 6e-08 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 1e-07 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-07 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 1e-07 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 1e-07 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-07 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-07 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 3e-07 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 8e-07 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 9e-07 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-06 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 1e-06 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-06 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-06 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-06 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-06 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-06 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-06 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 3e-06 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 4e-06 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 4e-06 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 5e-06 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 6e-06 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-05 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 2e-05 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 2e-05 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-05 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-05 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 2e-05 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-05 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 2e-05 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 2e-05 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 2e-05 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 3e-05 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 4e-05 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 4e-05 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 5e-05 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 5e-05 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 6e-05 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 9e-05 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 1e-04 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-04 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-04 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 2e-04 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 2e-04 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 2e-04 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 3e-04 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 5e-04 |
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 290 bits (746), Expect = 3e-98
Identities = 90/181 (49%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D + ++++A RR WGK +N+GQTC+APDYILC +Q QI+ + K L +Y E
Sbjct: 232 PCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGED 291
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S+ Y RI+S +HFQR+ L+ +A GG DA+ R+I+PTIL DV P P+M EE
Sbjct: 292 AKKSRDYGRIISARHFQRVMGLI-EGQKVAYGGTGDAATRYIAPTILTDVDPQSPVMQEE 350
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP+LPI+ V S EAIQFIN R KPL LY+FSSN +V + I +T SG + ND ++H
Sbjct: 351 IFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVH 410
Query: 181 Y 181
Sbjct: 411 I 411
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 212 bits (541), Expect = 1e-67
Identities = 60/183 (32%), Positives = 102/183 (55%), Gaps = 6/183 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
PL + +++ V + ++GK IN+GQT IAPDY+ V+ +L + + + E
Sbjct: 242 PLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPE- 300
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSS-GTIALGGDMDASDRFISPTILVDVKPTDPIMGE 119
++V+++ QRL SL+ ++ G + +G D S R +S T++ V+ DP+M E
Sbjct: 301 ---INSTGKLVTERQVQRLVSLLEATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSE 357
Query: 120 EIFGPILPIINVESAFEAIQFINA-RPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTV 178
E+FGPILP++ +S AI +N PKPL +Y+F + V + I+Q SG +N +
Sbjct: 358 ELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVM 417
Query: 179 MHY 181
+H
Sbjct: 418 LHA 420
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 6e-24
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSR---------QVQAQILNQAKA 51
+ +D +++LA L +GQ C A SR +V + + AK
Sbjct: 293 TVVVDRDADLDLAAESILVSAFGFSGQKCSA-----GSRAVIHKDVYDEVLEKTVALAKN 347
Query: 52 --VLDSWYTEQVQGSKHYCRIVSDKHFQRLKSLV---HSSGTIALGGDMDASD-RFISPT 105
V D + G ++ +K F+++ S + G + GG+ D+S FI PT
Sbjct: 348 LTVGDPTNRDNYMGP-----VIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPT 402
Query: 106 ILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIH 165
I+ D+ P IM EEIFGP++ A++ N LT + + N E
Sbjct: 403 IIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKR 462
Query: 166 QTHSGSMCIND 176
+ H G++ N
Sbjct: 463 EFHVGNLYFNR 473
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 5e-22
Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 25/186 (13%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ------AKA----VLDSWYT 58
+I+ A + G ++ GQ C++ + ++ V A + ++ D
Sbjct: 274 DIDAAAQAAAVGAFLHQGQICMSINRVI----VDAAVHDEFLEKFVEAVKNIPTGDPSAE 329
Query: 59 EQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFISPTILVDVKPTD 114
+ G +++D LK + + T+ + G R + P + DV
Sbjct: 330 GTLVGP-----VINDSQLSGLKEKIELAKKEGATVQVEGP--IEGRLVHPHVFSDVTSDM 382
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
I EEIFGP++ ++ + A + NA L+ ++S + F Q SG + I
Sbjct: 383 EIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHI 442
Query: 175 NDTVMH 180
ND ++
Sbjct: 443 NDLTVN 448
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 2e-21
Identities = 44/194 (22%), Positives = 76/194 (39%), Gaps = 34/194 (17%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
+ +D + + +LA + GQ C A SR + + Y
Sbjct: 294 AIIVDETADFDLAAEGVVVSAYGFQGQKCSA-----ASRLI----------LTQGAYEPV 338
Query: 61 VQGSKHYCR---------------IVSDKHFQRLKSLVHS---SGTIALGGDMDASD-RF 101
++ +VS + +++ S + G + LGG + F
Sbjct: 339 LERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYF 398
Query: 102 ISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQE 161
I+PT+ +V P I EEIFGP+L +I V+ EA++ N P LT ++S + E
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 162 LFIHQTHSGSMCIN 175
+ H G++ N
Sbjct: 459 WARREFHVGNLYFN 472
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 4e-21
Identities = 43/193 (22%), Positives = 73/193 (37%), Gaps = 32/193 (16%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-----AKAV--- 52
P + +++L + + G +GQ C A + VQ + +Q + V
Sbjct: 265 PAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVF----VQDSVADQLVANIKELVEQL 320
Query: 53 -----LDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFIS 103
D + ++ +K ++ L+ + T+ G +S
Sbjct: 321 TVGSPED----DADITP-----VIDEKSAAFIQGLIDDALENGATLLSGNK--RQGNLLS 369
Query: 104 PTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELF 163
PT+L DV P + EE FGP+LPII V+ A EAI N L +F+ +
Sbjct: 370 PTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINI 429
Query: 164 IHQTHSGSMCIND 176
G++ IN
Sbjct: 430 GKHLEVGTVHINA 442
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 6e-21
Identities = 38/193 (19%), Positives = 68/193 (35%), Gaps = 32/193 (16%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-----AKAV--- 52
+ ++EL + + G +GQ C A +L V + ++ + V
Sbjct: 256 SAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVL----VMESVADELVEKIREKVLAL 311
Query: 53 -----LDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFIS 103
D + ++ K ++ L++ + T I
Sbjct: 312 TIGNPED----DADITP-----LIDTKSADYVEGLINDANDKGATALTEIK--REGNLIC 360
Query: 104 PTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELF 163
P + V + EE FGP+LPII V S EAI+ N L +F+++
Sbjct: 361 PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGI 420
Query: 164 IHQTHSGSMCIND 176
Q G++ IN+
Sbjct: 421 AEQLEVGTVHINN 433
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 8e-20
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 25/190 (13%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSR---------QVQAQILNQAKA 51
+ ID +++ AV L+ GQ C A CSR + ++++ AKA
Sbjct: 787 AIIIDDDADLDEAVPHVLYSAFGFQGQKCSA-----CSRVIVLDAVYDKFIERLVSMAKA 841
Query: 52 --VLDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVH---SSGTIALGGDMDASD-RFISPT 105
V S G+ + DK + +K G + + A + F+ T
Sbjct: 842 TKVGPSEDPANYMGA-----VADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMT 896
Query: 106 ILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIH 165
I+ +KP I EEIFGP+L ++ + +AI++ N+ LT +FS + +
Sbjct: 897 IIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARR 956
Query: 166 QTHSGSMCIN 175
+ G++ IN
Sbjct: 957 EFRVGNLYIN 966
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 1e-19
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 27/187 (14%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQI-------LNQAKAVL---DSWYT 58
+++ AV ++GK I+ GQ C+ + I+ V + L D
Sbjct: 267 DVDRAVDAAIFGKFIHQGQICMIINRII----VHQDVYDEFVEKFTARVKQLPYGDQTDP 322
Query: 59 EQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFISPTILVDVKPTD 114
+ V G +++++ ++ ++ + +A+ G ++P + V
Sbjct: 323 KTVVGP-----LINERQIEKALEIIEQAKTDGIELAVEGK--RVGNVLTPYVFVGADNNS 375
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMC- 173
I E+F PI II S EAI N L+ +F+S+ + E F Q SG M
Sbjct: 376 KIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSG-MTH 434
Query: 174 INDTVMH 180
+ND ++
Sbjct: 435 VNDQSVN 441
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 2e-19
Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 18/184 (9%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILNQAKAVLDSWYTE 59
+ ++ L V L+ AGQ C R + I ++ L Y +
Sbjct: 275 AIIAFEDADLSLVVPSALFAAVGTAGQRCTT-----ARRLFIHESIHDEVVNRLKKAYAQ 329
Query: 60 QVQG-----SKHYCRIVSDKHFQRLKSLVHSS----GTIALGGD-MDASDRFISPTILVD 109
G + Y + + + V + GT+ GG MD ++ PTI+
Sbjct: 330 IRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTG 389
Query: 110 VKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHS 169
+ I E F PIL + ++ E + N + L+ +F+ + + +F
Sbjct: 390 LGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD--LGRIFRWLGPK 447
Query: 170 GSMC 173
GS C
Sbjct: 448 GSDC 451
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 4e-19
Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 22/185 (11%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSK--- 65
++ELAV+ + G+ N GQ C A + V+ I A+A D + K
Sbjct: 248 DLELAVKAAVAGRYQNTGQVCAAAKRFI----VEEGI---AQAFTDR-FVAAAAALKMGD 299
Query: 66 ------HYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD-RFISPTILVDVKPTD 114
+ L V +S + LGG+ A + + + T+L DV P
Sbjct: 300 PLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDM 359
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
+E+FGP+ I + A A+ N L+ +F+++ + + G + I
Sbjct: 360 TAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFI 419
Query: 175 NDTVM 179
N
Sbjct: 420 NGYSA 424
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 5e-19
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 35/195 (17%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-----AKAV--- 52
P + ++ AV + G I AGQ CI+ IL V I ++
Sbjct: 247 PNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMIL----VDESIADKFIEMFVNKAKVL 302
Query: 53 -----LDSWYTEQV-QGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFI 102
LD E+ G ++S +H + ++ +V + G + LGG
Sbjct: 303 NVGNPLD----EKTDVGP-----LISVEHAEWVEKVVEKAIDEGGKLLLGGK--RDKALF 351
Query: 103 SPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQEL 162
PTIL +V + + E F P++PII E I N+ L +F+++
Sbjct: 352 YPTIL-EVDRDNILCKTETFAPVIPIIRTNEE-EMIDIANSTEYGLHSAIFTNDINKSLK 409
Query: 163 FIHQTHSGSMCINDT 177
F G + IND+
Sbjct: 410 FAENLEFGGVVINDS 424
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 8e-19
Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 35/198 (17%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-----AKAV--- 52
P + +++LA + G AGQ C A +L + + + AK +
Sbjct: 269 PAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVL----AERPVYGKLVEEVAKRLSSL 324
Query: 53 -----LDSWYTEQV-QGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDRFI 102
D V G ++S + + + + G + GG ++
Sbjct: 325 RVGDPRD----PTVDVGP-----LISPSAVDEMMAAIEDAVEKGGRVLAGGRRL-GPTYV 374
Query: 103 SPTIL---VDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQV 159
PT + D + E+F P+ + V+ +AI+ N RP L +F +
Sbjct: 375 QPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVK 434
Query: 160 QELFIHQTHSGSMCINDT 177
+ G++ IND
Sbjct: 435 IRRAVRLLEVGAIYINDM 452
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 1e-18
Identities = 38/185 (20%), Positives = 64/185 (34%), Gaps = 22/185 (11%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSK--- 65
+ ++ + N GQ C + I+ V+ VL K
Sbjct: 245 DPQVLRNVLNDARTYNDGQVCTSSKRII----VEKSR---YDEVLHE-LKNVFSNLKAGD 296
Query: 66 ------HYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD-RFISPTILVDVKPTD 114
+ S+K ++L++ V + + S F PTIL D+ +
Sbjct: 297 PLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDN 356
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
P+ +E+FGPI + VE AIQ N L + S+ + Q +G I
Sbjct: 357 PVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVI 416
Query: 175 NDTVM 179
N +
Sbjct: 417 NGRWI 421
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 79.1 bits (196), Expect = 6e-18
Identities = 39/192 (20%), Positives = 66/192 (34%), Gaps = 27/192 (14%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQA----------K 50
PL ++ +++ AV + I+AGQ C +L V A
Sbjct: 254 PLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLL----VPQGAWGDALLARLVAVSAT 309
Query: 51 AVLDSWYTEQV--QGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGD-MDASDRFIS 103
+ + + G+ ++S + L L ++
Sbjct: 310 LRVGRFDEQPAPFMGA-----VISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLT 364
Query: 104 PTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELF 163
P IL DV EE FGP+L +I AI+ NA L L S + + E F
Sbjct: 365 PGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQF 423
Query: 164 IHQTHSGSMCIN 175
+ ++ +G + N
Sbjct: 424 LVESRAGIVNWN 435
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 2e-17
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 21/184 (11%)
Query: 8 VNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVL------DSWYTEQV 61
V+I+ A + N GQ C A +L +++ L + K +
Sbjct: 261 VDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQ 320
Query: 62 QGSKHYCRIVSDKHFQRLKSLVHSSG-----TIALGGDM--DASDR--FISPTILVDVKP 112
G I+S K F ++++ ++ G + GG + ++ F PTI ++V
Sbjct: 321 VGP-----IISKKQFDQVQNYINK-GIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDN 374
Query: 113 TDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSM 172
I EEIFGP++ +I EAIQ N L Y+ + + +G++
Sbjct: 375 QMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTV 434
Query: 173 CIND 176
IN+
Sbjct: 435 EINE 438
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 4e-17
Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 18/180 (10%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSW-----YTEQVQ- 62
++ A+ ++ +NAGQ C+ IL R +I+ + + Q
Sbjct: 268 DLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQI 327
Query: 63 GSKHYCRIVSDKHFQRLKSLVHS----SGTIALGGDM-DASDR--FISPTILVDVKPTDP 115
G ++S+K R++ + + GG + D FI PT+ DV
Sbjct: 328 GP-----LISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMT 382
Query: 116 IMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
I EEIFGP+L II ++ +AI N L +++++ Q +G+ IN
Sbjct: 383 IAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGIN 442
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 76.0 bits (188), Expect = 7e-17
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-----AKAV--------LDS 55
++ELAV+ + + IN+GQ C + + VQ I +Q +A+ +
Sbjct: 265 DLELAVKAIVDSRVINSGQVCNCAERVY----VQKGIYDQFVNRLGEAMQAVQFGNPAER 320
Query: 56 WYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGD-MDASDRFISPTILVDV 110
G +++ +R++ V + +A GG ++ + PT+L+DV
Sbjct: 321 NDIAM--GP-----LINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDV 373
Query: 111 KPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
+ IM EE FGP+LP++ ++ +AI N LT +++ N
Sbjct: 374 RQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 9e-17
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 37/190 (19%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSR---------QVQAQILNQAKAVL--DSWY 57
+++ A +G NAGQ CI+ SR + ++L+ ++ V D
Sbjct: 284 DLDAAADGIAYGVYHNAGQCCISG-----SRLLVQEGIRDALMERLLDISRKVAFGDPLN 338
Query: 58 TEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR--FISPTILVDVK 111
G+ ++S+ H +++ S V + + LGG+ + + +PT+ V
Sbjct: 339 ERTKIGA-----MISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVT 393
Query: 112 PTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSSNAQVQELFIHQ 166
P I EEIFGP+L + ++A EA+ NA T + ++S+N + I +
Sbjct: 394 PDMSIAREEIFGPVLSTLTFKTADEAVALANA-----TEFGLSASVWSTNLETALQTIRR 448
Query: 167 THSGSMCIND 176
+G IN
Sbjct: 449 IRAGRCWINS 458
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 5e-16
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 13 AVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQG--SKHYCRI 70
A++R + N+GQ+C AP +L V+ I ++A + G + I
Sbjct: 287 ALQRGVRHCFYNSGQSCNAPTRML----VEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHI 342
Query: 71 ---VSDKHFQRLKSLVHSSG-----TIALGGDM--DASDR--FISPTILVDVKPTDPIMG 118
VS + + +++ L+ SG T+ GG +R ++ PT+ DVKP I
Sbjct: 343 GPVVSKEQYDKIQDLI-QSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFR 401
Query: 119 EEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCIN 175
EEIFGP+L ++ + EA+ N LT Y+ S + Q SG + +N
Sbjct: 402 EEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVN 458
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 6e-16
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 38/197 (19%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSR---------QVQAQILNQAKA 51
P I S +++ AV + + N GQ A SR + + + +AK+
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCSCA-----GSRTFVQEDIYDEFVERSVARAKS 328
Query: 52 --VLDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHS----SGTIALGGDMDASDR--FIS 103
V + + ++ QG V + F+++ +++ + GG A+DR FI
Sbjct: 329 RVVGNPFDSKTEQGP-----QVDETQFKKILGYINTGKQEGAKLLCGGG-IAADRGYFIQ 382
Query: 104 PTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSSNAQ 158
PT+ DV+ I EEIFGP++ I+ ++ E + N + Y +F+ +
Sbjct: 383 PTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANN-----STYGLAAAVFTKDLD 437
Query: 159 VQELFIHQTHSGSMCIN 175
+G++ +N
Sbjct: 438 KANYLSQALQAGTVWVN 454
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 7e-16
Identities = 42/197 (21%), Positives = 77/197 (39%), Gaps = 38/197 (19%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSR---------QVQAQILNQAKA 51
P + + +++ AV G + GQ CIA SR + + + +AK
Sbjct: 275 PCIVFADADLDNAVEFAHQGVFYHQGQCCIA-----ASRLFVEESIYDEFVRRSVERAKK 329
Query: 52 --VLDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR--FIS 103
+ + QG + + ++++ L+ S + GG ++ FI
Sbjct: 330 YVLGNPLTPGVSQGP-----QIDKEQYEKILDLIESGKKEGAKLECGGG-PWGNKGYFIQ 383
Query: 104 PTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSSNAQ 158
PT+ DV I EEIFGP+ I+ +S + I+ N T Y +F+++
Sbjct: 384 PTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANN-----TFYGLSAGIFTNDID 438
Query: 159 VQELFIHQTHSGSMCIN 175
SG++ +N
Sbjct: 439 KAITVSSALQSGTVWVN 455
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 1e-15
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 38/199 (19%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSR---------QVQAQILNQAKA 51
PL + V+++ A ++G GQ C A SR + +I+ K
Sbjct: 266 PLVVFEDVDLDKAAEWAIFGCFWTNGQICSA-----TSRLILHESIATEFLNRIVKWIKN 320
Query: 52 --VLDSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGD-MDASDR--FI 102
+ D G +VS+ ++++ V ++ TI GG + + FI
Sbjct: 321 IKISDPLEEGCRLGP-----VVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFI 375
Query: 103 SPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSSNA 157
PTI+ DV I EE+FGP+L + + EAI N T+Y + S++
Sbjct: 376 EPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLAND-----TVYGLGAAVISNDL 430
Query: 158 QVQELFIHQTHSGSMCIND 176
+ E +G + +N
Sbjct: 431 ERCERVTKAFKAGIVWVNC 449
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 1e-15
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 40/201 (19%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSR---------QVQAQILNQAKA 51
P I + ELAV + L G +AGQ C A SR + + ++++ K
Sbjct: 285 PNIIFDDADFELAVDQALNGGYFHAGQVCSA-----GSRILVQNSIKDKFEQALIDRVKK 339
Query: 52 VL--DSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGG---DMDASDR-- 100
+ + + + G ++S +H +++S + + TIA+GG D D
Sbjct: 340 IKLGNGFDADTEMGP-----VISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGL 394
Query: 101 FISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSS 155
F PT++ + + I+ EE+FGP++ + E+ EAIQ N ++Y +FS
Sbjct: 395 FFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLAND-----SIYGLAGAVFSK 449
Query: 156 NAQVQELFIHQTHSGSMCIND 176
+ + ++ G++ IND
Sbjct: 450 DIGKAQRVANKLKLGTVWIND 470
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 2e-15
Identities = 38/199 (19%), Positives = 78/199 (39%), Gaps = 39/199 (19%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSR---------QVQAQILNQAKA 51
P+ + +IE AV + G ++GQ C +R + + + +A
Sbjct: 264 PMIVFDDADIESAVGGAMLGNFYSSGQVCSN-----GTRVFVQKKAKARFLENLKRRTEA 318
Query: 52 VL--DSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR----F 101
++ D G +VS +++ S + T+ GG + + +
Sbjct: 319 MILGDPLDYATHLGP-----LVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAY 373
Query: 102 ISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSSN 156
+ PT+ DV I EEIFGP++ +++ + E + NA T + +F+++
Sbjct: 374 VQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANA-----TEFGLAGGVFTAD 428
Query: 157 AQVQELFIHQTHSGSMCIN 175
+ +G++ IN
Sbjct: 429 LARAHRVVDGLEAGTLWIN 447
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 3e-15
Identities = 34/196 (17%), Positives = 67/196 (34%), Gaps = 36/196 (18%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P+ ID + +I+ AV L K + G C + ++ V ++ ++ K
Sbjct: 218 PVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVI----VVDEVYDEVKERF------- 266
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTI--------------ALGGDMDASDRFISPTI 106
+ H ++S +++ ++ G + G + A + +
Sbjct: 267 ---ASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADTKVLIGEG 323
Query: 107 LVDVKPTDPIMGEEIFGPILPII---NVESAFE-AIQFINARPKPLTLYLFS---SNAQV 159
L V D E+ P L + N E A A+ + T L++ NA
Sbjct: 324 LGKVSYDDAFAHEK-LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADR 382
Query: 160 QELFIHQTHSGSMCIN 175
F + + + IN
Sbjct: 383 IRYFGDKMKTARILIN 398
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 5e-15
Identities = 41/202 (20%), Positives = 75/202 (37%), Gaps = 42/202 (20%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSR---------QVQAQILNQAKA 51
PL I +E AVR L + GQ C +R Q +++ + KA
Sbjct: 269 PLLIFKDCELENAVRGALMANFLTQGQVCTN-----GTRVFVQREIMPQFLEEVVKRTKA 323
Query: 52 VL--DSWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR----- 100
++ D TE G ++S ++ V + + GG+
Sbjct: 324 IVVGDPLLTETRMGG-----LISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKN 378
Query: 101 --FISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LF 153
F+SP +L + + + EEIFGP++ ++ ++ E +Q N T + +F
Sbjct: 379 GYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANN-----TTFGLASGVF 433
Query: 154 SSNAQVQELFIHQTHSGSMCIN 175
+ + +G+ IN
Sbjct: 434 TRDISRAHRVAANLEAGTCYIN 455
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 6e-15
Identities = 37/194 (19%), Positives = 67/194 (34%), Gaps = 30/194 (15%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKA------VLD 54
PL I + ++ AV+ + N G+ CIA + + Q + + + +
Sbjct: 294 PLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGN 353
Query: 55 SWYTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR--FISPTILV 108
+ G + H ++L T+ GG+ F PT+
Sbjct: 354 PLERDTNHGP-----QNHEAHLRKLVEYCQRGVKEGATLVCGGN-QVPRPGFFFQPTVFT 407
Query: 109 DVKPTDPIMGEEIFGPILPII--NVESAFEAIQFINARPKPLTLY-----LFSSNAQVQE 161
DV+ I EE FGPI+ I + NA T + +F+ +
Sbjct: 408 DVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANA-----TEFGLASGVFTRDINKAL 462
Query: 162 LFIHQTHSGSMCIN 175
+ +G++ IN
Sbjct: 463 YVSDKLQAGTVFIN 476
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 8e-15
Identities = 37/194 (19%), Positives = 67/194 (34%), Gaps = 35/194 (18%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILNQAKAVLDSWYTE 59
+ D++ E + +AGQ C A VQ + A ++ E
Sbjct: 766 AMIADATALPEQVADDVVTSAFRSAGQRCSA-----LRLLFVQEDV---ADRMI-----E 812
Query: 60 QVQGSKHYCRI-------------VSDKHFQRLKSLVH---SSGTIALGGDMDASDRFIS 103
V G+ +I + + QRL + + + + G F++
Sbjct: 813 MVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAP-EGCFVA 871
Query: 104 PTILVDVKPTDPIMGEEIFGPILPIINVESAF--EAIQFINARPKPLTLYLFSSNAQVQE 161
P I + + EE+FGPIL ++ ++ I LTL + S E
Sbjct: 872 PHIFELTEAG--QLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIE 929
Query: 162 LFIHQTHSGSMCIN 175
I + G++ +N
Sbjct: 930 AIIDRVQVGNIYVN 943
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 2e-14
Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 29/186 (15%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKA------VLDSWYTEQVQ 62
+IE V NAGQ C A I + + ++ + A
Sbjct: 281 DIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTEL 340
Query: 63 GSKHYCRIVSDKHFQRLKSLVHS-----SGTIALGGDMDASDR--FISPTILVDVKPTDP 115
G + S H +R+ V + GG+ + +PT+L D
Sbjct: 341 GP-----LSSLAHLERVGKAVEEAKATGHIKVITGGE-KRKGNGYYYAPTLLAGALQDDA 394
Query: 116 IMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSSNAQVQELFIHQTHSG 170
I+ +E+FGP++ + ++ + + + N + Y +++ + + G
Sbjct: 395 IVQKEVFGPVVSVTPFDNEEQVVNWAND-----SQYGLASSVWTKDVGRAHRVSARLQYG 449
Query: 171 SMCIND 176
+N
Sbjct: 450 CTWVNT 455
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 2e-14
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ------ 62
+++ A LWG+ N GQ C + + V A + ++ A V+
Sbjct: 271 DLDKAAEDALWGRFANCGQVCTCVERLY----VHASVYDEFMAKF----LPLVKGLKVGD 322
Query: 63 ----GSKHYCRIVSDKHFQRLKSLVHSS----GTIALGG-----DMDASDRFISPTILVD 109
S+ + + + + +VH + T+A GG + + PT+LVD
Sbjct: 323 PMDADSQMGPKC-NQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVD 381
Query: 110 VKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
VK + ++ EE FGPILPI+ V S +AI+F N L+ Y+ + +
Sbjct: 382 VKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQS 428
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 5e-14
Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 39/191 (20%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSR---------QVQAQILNQAKAVL--DSWY 57
++E V NAGQ C A R ++ A + + +
Sbjct: 283 DLEAVVNGIRTFGYYNAGQDCTAA-----CRIYAEAGIYEKLVADLTSAVSTIRYNLDDD 337
Query: 58 TEQVQGSKHYCRIVSDKHFQRLKSLVHSSG-----TIALGGDMDASDR--FISPTILVDV 110
TE G ++S + R+ S V + I GG SD F PT++
Sbjct: 338 TENEIGP-----LISRRQRDRVASFVERAADQKHIEITTGGRT-GSDEGFFFQPTVVAGA 391
Query: 111 KPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSSNAQVQELFIH 165
D I+ E+FGP++ + +A+ + N + Y +++ +
Sbjct: 392 TQEDEIVRREVFGPVVSVTRFTGKDDAVAWAND-----SDYGLASSVWTKDISKAMRAAS 446
Query: 166 QTHSGSMCIND 176
+ G IN
Sbjct: 447 RLQYGCTWINT 457
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 6e-14
Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYIL----CSRQVQAQILNQAKAV-LDSWYTEQVQG 63
N+E V + +AG+ C+A + + + A++ + + + + + V
Sbjct: 263 NLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVF- 321
Query: 64 SKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR--FISPTILVDVKPTDPIM 117
++ + + +R S + + G + SD F+ PTI +V I
Sbjct: 322 ---LGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIW 378
Query: 118 GEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSSNAQVQELFIHQTHSGSM 172
+EIF P+L +I V++ EAI+ N + LF+SN+ F +G +
Sbjct: 379 KDEIFAPVLSVIRVKNLKEAIEIANKSE-----FANGACLFTSNSNAIRYFRENIDAGML 433
Query: 173 CIN 175
IN
Sbjct: 434 GIN 436
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 67.5 bits (166), Expect = 7e-14
Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 24/163 (14%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ------ 62
+++ AV L K NAGQTC+ + + VQ + ++ L + +
Sbjct: 268 DLDKAVEGALASKFRNAGQTCVCANRLY----VQDGVYDRFAEKL----QQAMSKLHIGD 319
Query: 63 ----GSKHYCRIVSDKHFQRLKSLVH---SSG-TIALGGD-MDASDRFISPTILVDVKPT 113
G I +K +++ + G + GG + F PTILVDV
Sbjct: 320 GLDNGVTIGPLI-DEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPAN 378
Query: 114 DPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
+ EE FGP+ P+ + + I N L Y ++ +
Sbjct: 379 AKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD 421
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 7e-14
Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 24/163 (14%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ------ 62
+++ AV + K N GQTC+ + V ++ + L V
Sbjct: 271 DLDAAVEGAIASKYRNNGQTCVCTNRFF----VHERVYDAFADKL----AAAVSKLKVGR 322
Query: 63 ----GSKHYCRIVSDKHFQRLKSLVH---SSG-TIALGGD-MDASDRFISPTILVDVKPT 113
G+ I ++ ++++S + + G ++ GG F PT+L VKP
Sbjct: 323 GTESGATLGPLI-NEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPD 381
Query: 114 DPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
+ EE FGP+ P+ S E ++ N L YL+S +
Sbjct: 382 MDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRD 424
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 7e-14
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ------ 62
+++ AV + K NAGQTC+ + I VQ + ++ L +V+
Sbjct: 291 DLDAAVDGAMVSKYRNAGQTCVCANRIY----VQRGVYDKFAEKL----AAKVKELKVGN 342
Query: 63 ----GSKHYCRIVSDKHFQRLKSLVH---SSG-TIALGGDMDASDRFISPTILVDVKPTD 114
G I +K ++K+ + S G + GG + F P IL V
Sbjct: 343 GTEPGVVIGPMI-EEKAITKVKAHIEDAVSKGAKLITGGK-ELGGLFFEPGILTGVTSDM 400
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
+ EE FGP+ P+ ++ E I N L Y ++ N
Sbjct: 401 LVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTEN 442
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 1e-13
Identities = 36/194 (18%), Positives = 58/194 (29%), Gaps = 35/194 (18%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P +I+ S NI AV+ L K + G C + ++ V+ A
Sbjct: 223 PAFIERSANIPRAVKHILDSKTFDNGTICASEQSVV----VERVNKEAVIAEF------- 271
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGT-------------IA--LGGDMDASDRFISPT 105
K +SD +L + IA G + A R +
Sbjct: 272 ---RKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVL-IA 327
Query: 106 ILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKP----LTLYLFSSNAQVQE 161
V P E PIL E+ EA + TL + S + ++
Sbjct: 328 EETKVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIR 386
Query: 162 LFIHQTHSGSMCIN 175
F + + +N
Sbjct: 387 EFALKKPVSRLLVN 400
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 1e-13
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 31/167 (18%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-----AKAV---------LD 54
N++ AV + K N GQTC+ + L VQ I + A+A+ +
Sbjct: 272 NVDQAVAGAMASKFRNTGQTCVCSNQFL----VQRGIHDAFVKAFAEAMKKNLRVGNGFE 327
Query: 55 SWYTEQVQGSKHYCRIVSDKHFQRLKSLVH---SSG-TIALGGD-MDASDRFISPTILVD 109
+G+ I ++K ++++ V+ S G T+ GG F PT+L +
Sbjct: 328 -------EGTTQGPLI-NEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCN 379
Query: 110 VKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
V EE FGP+ P+I ++ EAI NA L Y +S +
Sbjct: 380 VTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQD 426
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 3e-13
Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 25/164 (15%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ------ 62
++E A + K GQTC+ + I V ++ + L E+V
Sbjct: 270 DLEAAADNLIANKFRGGGQTCVCANRIF----VHEKVADAFGQKL----AERVNKMTVGD 321
Query: 63 ----GSKHYCRIVSDKHFQRLKSLVH---SSG-TIALGGDMDA--SDRFISPTILVDVKP 112
G I + + F ++K + G ++ G F PT++ V
Sbjct: 322 GMNDGIDIGPLI-NKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDR 380
Query: 113 TDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156
EE FGP++P+ + E I N L Y+F+++
Sbjct: 381 EMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTAD 424
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 2e-12
Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 13/150 (8%)
Query: 13 AVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIV 71
+F+ + GQ C P + + Q + L + +
Sbjct: 273 LADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTP-----GI 327
Query: 72 SDKHFQRLKSLVHSSG-TIALGGDMDASDRFISPTILV---DVKPTDPIMGEEIFGPILP 127
D + ++ S G + A ++ + V + P EEIFGP
Sbjct: 328 RDSYQSQVVSRGSDDGIDVTFSQ---AESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384
Query: 128 IINVESAFEAIQFINARPKPLTLYLFSSNA 157
I+ E+ + + LT + ++
Sbjct: 385 IVVCENVADMLSLSEMLAGSLTATIHATEE 414
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 4e-12
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 27/193 (13%)
Query: 4 IDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILNQAKAVLDSWYTEQVQ 62
+ SS +++ V L GQ C A CSR V + Q K L ++
Sbjct: 323 VHSSADVDSVVSGTLRSAFEYGGQKCSA-----CSRLYVPKSLWPQIKGRLLEEHSRIKV 377
Query: 63 GS-----KHYCRIVSDKH-FQRLKSLVH---SSG--TIALGGDMDASD-RFISPTILVDV 110
G + V D F R+K + SS +I GG + S ++ P I+
Sbjct: 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESK 437
Query: 111 KPTDPIMGEEIFGPILPIINVE-SAF-EAIQFINAR-PKPLTLYLFSSN----AQVQELF 163
P +PIM EEIFGP+L + + E ++ +++ LT +F+ + + +
Sbjct: 438 DPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRML 497
Query: 164 IHQTHSGSMCIND 176
+ +G+ IND
Sbjct: 498 --RNAAGNFYIND 508
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 6e-12
Identities = 31/187 (16%), Positives = 75/187 (40%), Gaps = 29/187 (15%)
Query: 9 NIELAVRRFLWGKCINAGQTCIAPDYILC-----SRQVQAQILNQAKAV-LDSWYTEQVQ 62
+++ A + +AG+ C+A + + ++ +++ +++ + + E+
Sbjct: 284 DLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKAD 343
Query: 63 GSKHYCRIVSDKHFQRLKSLVHSS----GTIALGG---DMDASDR--FISPTILVDVKPT 113
+V+ + QR++SL+ S + + G + + FI + DV P
Sbjct: 344 ----MGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPD 399
Query: 114 DPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY-----LFSSNAQVQELFIHQTH 168
I EIFGP+L ++ + EA+ Y +++ + F + +
Sbjct: 400 MDIYKTEIFGPVLSVVRARNYEEALSLPMKHE-----YGNGVAIYTRDGDAARDFASRIN 454
Query: 169 SGSMCIN 175
G + +N
Sbjct: 455 IGMVGVN 461
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 2e-11
Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 35/192 (18%)
Query: 8 VNIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQI--------LNQAKAVL--DSW 56
++E A+ ++ G+ C A SR V+ +I + +A+A+
Sbjct: 284 ADLERALDAVVFQIFSFNGERCTAS-----SRLLVEEKIFEDFVGKVVERARAIRVGHPL 338
Query: 57 YTEQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR---------FIS 103
E G ++ +H QR+ V + + +GG+ + ++
Sbjct: 339 DPETEVGP-----LIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLL 393
Query: 104 PTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELF 163
PT+ V + I EEIFGP+L I + EA++ N L Y+F+ + +
Sbjct: 394 PTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRL 452
Query: 164 IHQTHSGSMCIN 175
+ +G + +N
Sbjct: 453 ALELEAGMVYLN 464
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 7e-11
Identities = 27/196 (13%), Positives = 60/196 (30%), Gaps = 31/196 (15%)
Query: 7 SVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSW-----YTEQV 61
+ +L ++ + + +GQ C A +L KA L + V
Sbjct: 277 TPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAV 336
Query: 62 Q-GSKHYCRIVSDKHFQR----LKSLVHSSGTIALGGDMDASDR------FISPTILV-- 108
+ GS +VS + ++ + +L + + D ++P + V
Sbjct: 337 RMGS-----LVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVN 391
Query: 109 DVKPTDPIMGEEIFGPILPII--------NVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160
D + E+FGP+ + N A+ L ++S++
Sbjct: 392 DPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHL 451
Query: 161 ELFIHQTHSGSMCIND 176
+ ++
Sbjct: 452 GRLALELADSHGRVHA 467
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 9e-10
Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 14/151 (9%)
Query: 13 AVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRI-- 70
+ + + AGQ C P + A A E + +
Sbjct: 307 LGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAV-------EALAKVAPQTMLTD 359
Query: 71 -VSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPT---DPIMGEEIFGPIL 126
++ + + L ++S R SP + D +GEE+FGP+
Sbjct: 360 GIAKAYRDGQARFATRNAVKPLLAT-ESSGRDASPNLFETTGAQFLADHALGEEVFGPLG 418
Query: 127 PIINVESAFEAIQFINARPKPLTLYLFSSNA 157
++ V S E + LT +
Sbjct: 419 LVVRVGSPAEMEELARGFQGQLTATIHMDAG 449
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 38.6 bits (89), Expect = 3e-04
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 38 SRQVQAQILNQAKAVLDSWY---TEQVQGSKHYCRIVSDKHF--QR 78
S+ ++ + +AK L+ W +EQV+ +K RI +DK F Q
Sbjct: 105 SKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRI-ADKAFYQQP 149
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 181 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 99.97 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-48 Score=323.64 Aligned_cols=179 Identities=20% Similarity=0.308 Sum_probs=170.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++||| ++.+++||+++..+++++
T Consensus 258 p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv 337 (490)
T 2wme_A 258 PLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESV 337 (490)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred eEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||... ..|+|++|||+.++++++++++||+||||++|++|+|.+||++++|+++|||++
T Consensus 338 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a 417 (490)
T 2wme_A 338 LGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAA 417 (490)
T ss_dssp HHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeE
Confidence 99986 699999999743 258999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|||+|.+++.+++.++++|+|+||++..
T Consensus 418 ~v~t~d~~~a~~~~~~l~aG~v~iN~~~~ 446 (490)
T 2wme_A 418 GVVTQDLARAHRAIHRLEAGICWINTWGE 446 (490)
T ss_dssp EEECSBHHHHHHHHHHSCCSEEEESCCSC
T ss_pred EEEcCCHHHHHHHHHHCCeeEEEEeCCCC
Confidence 99999999999999999999999998643
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-47 Score=316.54 Aligned_cols=177 Identities=50% Similarity=0.905 Sum_probs=169.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++. |+| ++.+++||+++..+++++
T Consensus 232 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv 310 (469)
T 3sza_A 232 PCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRV 310 (469)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHH
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999999885 555 678999999999999999
Q ss_pred HHHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHH
Q psy11681 80 KSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQV 159 (181)
Q Consensus 80 ~~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~ 159 (181)
.+++ +|+++++||..+..++|++||++.+++++|++++||+||||++|++|+|++||++++|+++|||+++|||+|.++
T Consensus 311 ~~~i-~ga~v~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 389 (469)
T 3sza_A 311 MGLI-EGQKVAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKV 389 (469)
T ss_dssp HHHH-TTSEEEECCCEETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHH
T ss_pred HHHH-cCCEEEeCCccCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHH
Confidence 9999 599999999876678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCccc
Q psy11681 160 QELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 160 ~~~~~~~~~~g~v~iN~~~~ 179 (181)
+.+++.++++|+|+||++..
T Consensus 390 a~~~~~~l~~G~V~vN~~~~ 409 (469)
T 3sza_A 390 IKKMIAETSSGGVAANDVIV 409 (469)
T ss_dssp HHHHHHHCCCSEEEESCSSG
T ss_pred HHHHHHhCCcceEEEeCCCC
Confidence 99999999999999999764
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=315.15 Aligned_cols=178 Identities=21% Similarity=0.363 Sum_probs=170.3
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++++.||| ++.+++||+++..+++++
T Consensus 263 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v 342 (484)
T 3ifg_A 263 PFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKV 342 (484)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..++|+.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 343 ~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t 422 (484)
T 3ifg_A 343 ESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYS 422 (484)
T ss_dssp HHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEEC
T ss_pred HHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99986 699999999753 3689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.+++.++++|+|+||++.
T Consensus 423 ~d~~~a~~~~~~l~aG~v~iN~~~ 446 (484)
T 3ifg_A 423 RDIGRVWRVAEALEYGMVGINTGL 446 (484)
T ss_dssp CBHHHHHHHHHHCCCSEEEESCSC
T ss_pred CCHHHHHHHHHhCCcceEEEcCCC
Confidence 999999999999999999999854
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-47 Score=318.03 Aligned_cols=179 Identities=25% Similarity=0.365 Sum_probs=171.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+| ++.+++||++++.+++++
T Consensus 285 p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v 364 (520)
T 3ed6_A 285 PNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKI 364 (520)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHH
T ss_pred eeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 468999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-----CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDMD-----ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-----~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||... ..|+|++|||+.++++++++++||+||||++|++|+|.+||++++|+++|||++
T Consensus 365 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a 444 (520)
T 3ed6_A 365 ESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAG 444 (520)
T ss_dssp HHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEE
T ss_pred HHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEE
Confidence 99986 699999999753 468999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|||+|.+++.+++.++++|+|+||++..
T Consensus 445 ~v~t~d~~~a~~~a~~l~aG~V~iN~~~~ 473 (520)
T 3ed6_A 445 AVFSKDIGKAQRVANKLKLGTVWINDFHP 473 (520)
T ss_dssp EEECSCHHHHHHHHHHSCCSEEEESCSCC
T ss_pred EEECCCHHHHHHHHHHCCcceEEECCCCC
Confidence 99999999999999999999999998754
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=316.59 Aligned_cols=179 Identities=18% Similarity=0.292 Sum_probs=171.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.|+| ++.+++||+++..+++++
T Consensus 262 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv 341 (506)
T 3rh9_A 262 PFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKV 341 (506)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSGTIALGGDM-DA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +|+++++||.. +. .++|+.||++.++++++++++||+||||++|++|+|++||++++|+++|||+++||
T Consensus 342 ~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~ 421 (506)
T 3rh9_A 342 KRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVF 421 (506)
T ss_dssp HHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEE
T ss_pred HHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 99987 69999999974 33 68999999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|.+++.+++.++++|+|+||++..
T Consensus 422 t~d~~~a~~~~~~l~aG~V~vN~~~~ 447 (506)
T 3rh9_A 422 TADAERAQRVAAGLRFGHVGWNTGTG 447 (506)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESCCCC
T ss_pred cCCHHHHHHHHHhCCcceEEEcCCCC
Confidence 99999999999999999999999754
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=315.36 Aligned_cols=178 Identities=21% Similarity=0.316 Sum_probs=170.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++||| ++.+++||+++..+++++
T Consensus 237 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv 316 (484)
T 3ros_A 237 AFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKL 316 (484)
T ss_dssp EEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred cceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||.. +..|+|++||++.++++++++++||+||||++|++|+|++||++++|+++|||+++|||
T Consensus 317 ~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t 396 (484)
T 3ros_A 317 EAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIG 396 (484)
T ss_dssp HHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEEC
T ss_pred HHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEEC
Confidence 99987 69999999874 45789999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.+++.++++|+|+||++.
T Consensus 397 ~d~~~a~~~~~~l~aG~V~vN~~~ 420 (484)
T 3ros_A 397 SDIDRAKKVSAQIETGMTVINGRW 420 (484)
T ss_dssp SCHHHHHHHHHHSCSSCCEETSCC
T ss_pred CCHHHHHHHHHhCccceEEECCCC
Confidence 999999999999999999999964
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=317.25 Aligned_cols=179 Identities=23% Similarity=0.395 Sum_probs=171.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+| ++.+++||+++..+++++
T Consensus 276 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv 355 (528)
T 3u4j_A 276 PQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKV 355 (528)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHH
T ss_pred eeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccCC--CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSGTIALGGDMDA--SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~--~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +|+++++||.... .|+|++|||+.++++++++++||+||||++|++|+|.+||++++|+++|||+++||
T Consensus 356 ~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~ 435 (528)
T 3u4j_A 356 HSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVW 435 (528)
T ss_dssp HHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEE
Confidence 99986 6999999997543 78999999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|.+++.+++.++++|+|+||++..
T Consensus 436 t~d~~~a~~~~~~l~aG~V~vN~~~~ 461 (528)
T 3u4j_A 436 STNLETALQTIRRIRAGRCWINSVID 461 (528)
T ss_dssp CSBHHHHHHHHHHSCCSEEEESCCSC
T ss_pred cCCHHHHHHHHHhCCeeEEEECCCCC
Confidence 99999999999999999999999753
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=316.25 Aligned_cols=180 Identities=18% Similarity=0.296 Sum_probs=171.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.|+| ++.+++||+++..+++++
T Consensus 275 p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v 354 (498)
T 4f3x_A 275 PVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRV 354 (498)
T ss_dssp EEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHH
T ss_pred cEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCc-eeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSG-TIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga-~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +|+ ++++||.. +..|+|++|||+.++++++++++||+||||++|++|+|.+||++++|+++|||+++||
T Consensus 355 ~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~ 434 (498)
T 4f3x_A 355 ASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVW 434 (498)
T ss_dssp HHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEE
T ss_pred HHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEE
Confidence 99986 689 99999974 3478999999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|+|.+++.+++.++++|+|+||++..+
T Consensus 435 t~d~~~a~~~a~~l~aG~V~vN~~~~~ 461 (498)
T 4f3x_A 435 TKDISKAMRAASRLQYGCTWINTHFML 461 (498)
T ss_dssp CSBHHHHHHHHHHCCSSEEEESCCSCC
T ss_pred CCCHHHHHHHHHhCCcceEEEcCCCCC
Confidence 999999999999999999999997653
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=314.77 Aligned_cols=177 Identities=21% Similarity=0.317 Sum_probs=169.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.||| ++.+++||+++..+++++
T Consensus 283 p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v 362 (504)
T 3ek1_A 283 PFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKV 362 (504)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHH
T ss_pred eeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. ..++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+
T Consensus 363 ~~~i~~a~~~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 441 (504)
T 3ek1_A 363 KAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTE 441 (504)
T ss_dssp HHHHHHHHHTTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECC
T ss_pred HHHHHHHHHCCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcC
Confidence 99987 69999999975 36899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|.+++.+++.++++|+|+||++.
T Consensus 442 d~~~a~~~a~~l~aG~V~vN~~~ 464 (504)
T 3ek1_A 442 NFSRAIRVSEALEYGMVGHNTGL 464 (504)
T ss_dssp BHHHHHHHHHHSCCSEEEESCSC
T ss_pred CHHHHHHHHHhCCcCeEEECCCC
Confidence 99999999999999999999864
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-46 Score=311.18 Aligned_cols=179 Identities=20% Similarity=0.351 Sum_probs=170.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.|+| ++.+++||+++..+++++
T Consensus 260 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 339 (481)
T 3jz4_A 260 PFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKV 339 (481)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred eEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||.. +..++++.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 340 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 419 (481)
T 3jz4_A 340 EEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA 419 (481)
T ss_dssp HHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEEC
Confidence 99987 59999999975 44679999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+|.+++.+++.++++|+|+||++..
T Consensus 420 ~d~~~a~~~~~~l~~G~v~iN~~~~ 444 (481)
T 3jz4_A 420 RDLSRVFRVGEALEYGIVGINTGII 444 (481)
T ss_dssp CBHHHHHHHHHHCCCSEEEESCSCC
T ss_pred CCHHHHHHHHHhCCeeeEEECCCCC
Confidence 9999999999999999999998653
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=314.37 Aligned_cols=178 Identities=23% Similarity=0.355 Sum_probs=170.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.||| ++.+++||++++.+++++
T Consensus 266 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 345 (503)
T 3iwj_A 266 PLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKI 345 (503)
T ss_dssp EEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred ceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC---CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDMD---ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~---~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|+++++||... ..++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|
T Consensus 346 ~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 425 (503)
T 3iwj_A 346 LKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAV 425 (503)
T ss_dssp HHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEE
T ss_pred HHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEE
Confidence 99986 699999999754 46899999999999999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|.+++.+++.++++|+|+||++.
T Consensus 426 ~t~d~~~a~~~~~~l~aG~v~iN~~~ 451 (503)
T 3iwj_A 426 ISNDLERCERVTKAFKAGIVWVNCSQ 451 (503)
T ss_dssp ECSCHHHHHHHHHHCCSSEEEESSSC
T ss_pred ECCCHHHHHHHHHhCCcceEEEcCCC
Confidence 99999999999999999999999864
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=312.51 Aligned_cols=180 Identities=23% Similarity=0.403 Sum_probs=170.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|+++..+++.|+|. +.+++||++++.+.+++
T Consensus 238 p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 317 (474)
T 4h7n_A 238 PAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGII 317 (474)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHH
T ss_pred ccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999994 68899999999999999
Q ss_pred HHHHh----cCceeeeCCccC--CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSGTIALGGDMD--ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~--~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +|++++.||... ..|++++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++||
T Consensus 318 ~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~ 397 (474)
T 4h7n_A 318 NDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVF 397 (474)
T ss_dssp HHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEE
Confidence 98876 699999998753 468999999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|+|.+++.+++.++++|+|+||+++++
T Consensus 398 t~d~~~a~~~a~~l~aG~v~iN~~~~~ 424 (474)
T 4h7n_A 398 AGSEDEALKVARQLNAGAISINDAALT 424 (474)
T ss_dssp CSSHHHHHHHHTTSCCSEEEESSSCGG
T ss_pred eCCHHHHHHHHHhCCeeEEEECCCCcc
Confidence 999999999999999999999987653
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=314.07 Aligned_cols=178 Identities=20% Similarity=0.321 Sum_probs=170.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++||| ++.+++||+++..+++++
T Consensus 274 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv 353 (500)
T 1o04_A 274 PNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 353 (500)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 468999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..++++.|||+.+++++|++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 354 ~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 433 (500)
T 1o04_A 354 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 433 (500)
T ss_dssp HHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEEC
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEEC
Confidence 99986 589999999753 3689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.+++.++++|+|+||++.
T Consensus 434 ~d~~~a~~~~~~l~aG~V~iN~~~ 457 (500)
T 1o04_A 434 KDLDKANYLSQALQAGTVWVNCYD 457 (500)
T ss_dssp SBHHHHHHHHHHCCSSEEEESCSS
T ss_pred CCHHHHHHHHHhCCeeEEEECCCC
Confidence 999999999999999999999865
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=312.20 Aligned_cols=178 Identities=18% Similarity=0.305 Sum_probs=169.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.||| ++.+++||+++..+++++
T Consensus 273 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv 352 (495)
T 1wnd_A 273 PVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERV 352 (495)
T ss_dssp EEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHH
T ss_pred eEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 468999999999999999
Q ss_pred HHHHh----cC-ceeeeCCc-cCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SS-GTIALGGD-MDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~g-a~~~~gg~-~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +| +++++||. .++.|++++||++.++++++++++||+||||++|++|+|++||++++|+++|||+++||
T Consensus 353 ~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 432 (495)
T 1wnd_A 353 GKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVW 432 (495)
T ss_dssp HHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEE
T ss_pred HHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEE
Confidence 99987 58 99999997 44468999999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|+|.+++.+++.++++|+|+||++.
T Consensus 433 t~d~~~a~~~~~~l~aG~V~iN~~~ 457 (495)
T 1wnd_A 433 TKDVGRAHRVSARLQYGCTWVNTHF 457 (495)
T ss_dssp CSBHHHHHHHHHHCCSSEEEESCCC
T ss_pred CCCHHHHHHHHHhCCcceEEECCCC
Confidence 9999999999999999999999864
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=313.87 Aligned_cols=178 Identities=19% Similarity=0.294 Sum_probs=170.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.||| ++.+++||++++.+++++
T Consensus 275 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv 354 (501)
T 1bxs_A 275 PCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKI 354 (501)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 468999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||... ..++|+.||++.++++++++++||+||||++|++|+|++||++++|+++|||+++|||
T Consensus 355 ~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 434 (501)
T 1bxs_A 355 LDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFT 434 (501)
T ss_dssp HHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEEC
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEc
Confidence 99986 589999998753 3689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.+++.++++|+|+||++.
T Consensus 435 ~d~~~a~~~~~~l~aG~V~iN~~~ 458 (501)
T 1bxs_A 435 NDIDKAITVSSALQSGTVWVNCYS 458 (501)
T ss_dssp SBHHHHHHHHHHSCCSEEEESCCC
T ss_pred CCHHHHHHHHHhcCeeEEEECCCC
Confidence 999999999999999999999865
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=314.40 Aligned_cols=178 Identities=20% Similarity=0.298 Sum_probs=170.3
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++||| ++.+++||+++..+++++
T Consensus 294 p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v 373 (517)
T 2o2p_A 294 PLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKL 373 (517)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCC--HHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVES--AFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+| ++||++++|+++|||+++|
T Consensus 374 ~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v 453 (517)
T 2o2p_A 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGV 453 (517)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEE
T ss_pred HHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEE
Confidence 99986 5899999997543 689999999999999999999999999999999999 9999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|.+++.+++.++++|+|+||++.
T Consensus 454 ~t~d~~~a~~~~~~l~aG~V~iN~~~ 479 (517)
T 2o2p_A 454 FTRDINKALYVSDKLQAGTVFINTYN 479 (517)
T ss_dssp ECSBHHHHHHHHHHCCSSEEEESCSS
T ss_pred eCCCHHHHHHHHHhcCEeEEEECCCC
Confidence 99999999999999999999999864
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=314.07 Aligned_cols=177 Identities=23% Similarity=0.381 Sum_probs=170.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|||.+.+++||+++..+++++.
T Consensus 265 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~ 344 (505)
T 3prl_A 265 PAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQ 344 (505)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred HHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCc
Q psy11681 81 SLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d 156 (181)
++++ +|+++++||.. .++|+.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+|
T Consensus 345 ~~i~~a~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d 422 (505)
T 3prl_A 345 GLIDDALENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKD 422 (505)
T ss_dssp HHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSC
T ss_pred HHHHHHHHCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCC
Confidence 9986 59999999963 68999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCccc
Q psy11681 157 AQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 157 ~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
.+++.+++.++++|+|+||++..
T Consensus 423 ~~~a~~~~~~l~aG~V~iN~~~~ 445 (505)
T 3prl_A 423 TDRAINIGKHLEVGTVHINAKTE 445 (505)
T ss_dssp HHHHHHHHHTSCSSEEEESSCCC
T ss_pred HHHHHHHHHHCCeeEEEEcCCCC
Confidence 99999999999999999999764
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=312.87 Aligned_cols=179 Identities=20% Similarity=0.332 Sum_probs=170.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.||| ++.+++||++++.+++++
T Consensus 269 p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv 348 (503)
T 1a4s_A 269 PLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKV 348 (503)
T ss_dssp EEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-------CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCc
Q psy11681 80 KSLVH----SSGTIALGGDMD-------ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPL 148 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-------~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 148 (181)
.++++ +|+++++||... ..++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||
T Consensus 349 ~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 428 (503)
T 1a4s_A 349 LGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGL 428 (503)
T ss_dssp HHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCc
Confidence 99986 589999999753 3588999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 149 TLYLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 149 ~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+++|||+|.+++.+++.++++|+|+||++..
T Consensus 429 ~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~ 459 (503)
T 1a4s_A 429 ASGVFTRDISRAHRVAANLEAGTCYINTYSI 459 (503)
T ss_dssp EEEEECSBHHHHHHHHHHSCSSEEEESCCCC
T ss_pred eEEEECCCHHHHHHHHHHCceeEEEECCCCC
Confidence 9999999999999999999999999998653
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=314.44 Aligned_cols=180 Identities=24% Similarity=0.447 Sum_probs=169.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+| ++.+++||+++..+++++
T Consensus 263 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v 342 (497)
T 3k2w_A 263 PMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNI 342 (497)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCcc---CC--CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceE
Q psy11681 80 KSLVH----SSGTIALGGDM---DA--SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTL 150 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~---~~--~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 150 (181)
.++++ +|+++++||.. +. .++|+.||++.++++++++++||+||||++|++|+|++||++++|+++|||++
T Consensus 343 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a 422 (497)
T 3k2w_A 343 DHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSA 422 (497)
T ss_dssp HHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEE
T ss_pred HHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEE
Confidence 99986 58999999972 22 68999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 151 YLFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 151 ~i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+|||+|.+++.+++.++++|+|+||+++.+
T Consensus 423 ~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~ 452 (497)
T 3k2w_A 423 YVHTQSFANINQAISDLEVGEVYINRGMGE 452 (497)
T ss_dssp EEECSBHHHHHHHHHHCCSSEEEESCCSCC
T ss_pred EEEcCCHHHHHHHHHhCCeeEEEEcCCCCC
Confidence 999999999999999999999999998654
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=313.54 Aligned_cols=178 Identities=23% Similarity=0.354 Sum_probs=170.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.||| ++.+++||+++..+++++
T Consensus 260 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv 339 (495)
T 3b4w_A 260 AAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRV 339 (495)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccCC---CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDMDA---SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~---~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|+++++||.... .+++++||++.++++++++++||+||||++|++|+|++||++++|+++|||+++|
T Consensus 340 ~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 419 (495)
T 3b4w_A 340 EGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSV 419 (495)
T ss_dssp HHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEE
T ss_pred HHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEE
Confidence 99986 5899999997543 5899999999999999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|.+++.+++.++++|+|+||++.
T Consensus 420 ~t~d~~~a~~~~~~l~aG~V~iN~~~ 445 (495)
T 3b4w_A 420 WTTDVPKGIKISQQIRTGTYGINWYA 445 (495)
T ss_dssp ECSCHHHHHHHHHHSCCSCCEESSCC
T ss_pred ECCCHHHHHHHHHhCCEeEEEECCCC
Confidence 99999999999999999999999864
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-46 Score=311.07 Aligned_cols=175 Identities=23% Similarity=0.385 Sum_probs=168.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|++++.++++|+| ++.+++||+++..+++++
T Consensus 247 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 326 (486)
T 3pqa_A 247 PNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWV 326 (486)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred cEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .|+|++||++ ++++++++++||+||||++|++|+| +||++++|+++|||+++|||+
T Consensus 327 ~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~ 402 (486)
T 3pqa_A 327 EKVVEKAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTN 402 (486)
T ss_dssp HHHHHHHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECS
T ss_pred HHHHHHHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECC
Confidence 99986 69999999964 5789999999 9999999999999999999999999 999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|.+++.+++.++++|+|+||+++.
T Consensus 403 d~~~a~~~~~~l~aG~v~vN~~~~ 426 (486)
T 3pqa_A 403 DINKSLKFAENLEFGGVVINDSSL 426 (486)
T ss_dssp BHHHHHHHHHHSCSSEEEESSCTT
T ss_pred CHHHHHHHHHhCCcceEEEeCCCC
Confidence 999999999999999999999864
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-46 Score=310.37 Aligned_cols=179 Identities=23% Similarity=0.416 Sum_probs=170.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC--CCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ--GSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~--~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.|+|. +.+++||++++.++++
T Consensus 257 p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~r 336 (479)
T 2imp_A 257 PAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALER 336 (479)
T ss_dssp EEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999994 6899999999999999
Q ss_pred HHHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 79 LKSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
+.++++ +|+++++||.. +..|+|++||++.++++++++++||+||||++|++|+|++||++++|+++|||+++||
T Consensus 337 v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~ 416 (479)
T 2imp_A 337 VEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIY 416 (479)
T ss_dssp HHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEE
T ss_pred HHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEE
Confidence 999987 58999999975 3358999999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|.+++.+++.++++|+|+||++..
T Consensus 417 t~d~~~~~~~~~~l~~G~v~iN~~~~ 442 (479)
T 2imp_A 417 TQNLNVAMKAIKGLKFGETYINRENF 442 (479)
T ss_dssp CCCHHHHHHHHHHCCSSEEEESSCCC
T ss_pred CCCHHHHHHHHHhCCEeEEEECCCCC
Confidence 99999999999999999999998764
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=311.32 Aligned_cols=180 Identities=23% Similarity=0.385 Sum_probs=171.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhc-ccccCC-CCCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDS-WYTEQV-QGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~-~~~g~~-~~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|++++.+ ++.||| ++.+++||++++.++++
T Consensus 264 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~r 343 (487)
T 2w8n_A 264 PFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEK 343 (487)
T ss_dssp EEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999 999998 56899999999999999
Q ss_pred HHHHHh----cCceeeeCCccCCCCc-eeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 79 LKSLVH----SSGTIALGGDMDASDR-FISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~~~~~~-~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
+.++++ +|+++++||..+..++ +++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++||
T Consensus 344 v~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~ 423 (487)
T 2w8n_A 344 VEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFY 423 (487)
T ss_dssp HHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEE
T ss_pred HHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEe
Confidence 999987 5899999997654688 99999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|+|.+++.+++.++++|+|+||++..+
T Consensus 424 t~d~~~a~~~~~~l~aG~v~vN~~~~~ 450 (487)
T 2w8n_A 424 SQDPAQIWRVAEQLEVGMVGVNEGLIS 450 (487)
T ss_dssp CCCHHHHHHHHHHSCSSEEEESCSCCC
T ss_pred CCCHHHHHHHHHhCCeeeEEEcCCCCC
Confidence 999999999999999999999987653
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-46 Score=313.36 Aligned_cols=175 Identities=23% Similarity=0.386 Sum_probs=167.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|||. +.+++||+++..+++++
T Consensus 293 p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv 372 (538)
T 3qan_A 293 TVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKI 372 (538)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999994 68999999999999999
Q ss_pred HHHHh----cCceeeeCCccCC-CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMDA-SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~-~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +| ++++||..+. .|+|++|||+.++++++++++||+||||++|++|+|++||++++|+++|||+++|||
T Consensus 373 ~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t 451 (538)
T 3qan_A 373 MSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVIT 451 (538)
T ss_dssp HHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEEC
T ss_pred HHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEC
Confidence 99986 57 9999997543 689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECC
Q psy11681 155 SNAQVQELFIHQTHSGSMCIND 176 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~ 176 (181)
+|.+++.+++.++++|+|+||+
T Consensus 452 ~d~~~a~~~~~~l~aG~V~iN~ 473 (538)
T 3qan_A 452 RNRAHIEQAKREFHVGNLYFNR 473 (538)
T ss_dssp SCHHHHHHHHHHCCCSEEEESS
T ss_pred CCHHHHHHHHHhCCeeEEEEeC
Confidence 9999999999999999999994
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-46 Score=314.35 Aligned_cols=178 Identities=17% Similarity=0.304 Sum_probs=170.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccc-cHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~-~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|++++++++.|+| ++.+++||+++..++++
T Consensus 276 p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~r 355 (521)
T 4e4g_A 276 HMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQR 355 (521)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHH
T ss_pred eEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHH
Confidence 7899999999999999999999999999999999999999 999999999999999999998 56899999999999999
Q ss_pred HHHHHh----cCceeeeCCcc-----CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCce
Q psy11681 79 LKSLVH----SSGTIALGGDM-----DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLT 149 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~-----~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 149 (181)
+.++++ +|+++++||.. ...++|+.|||+.++++++++++||+||||++|++|+|++||++++|+++|||+
T Consensus 356 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLa 435 (521)
T 4e4g_A 356 IRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNG 435 (521)
T ss_dssp HHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESE
T ss_pred HHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeE
Confidence 999987 59999999963 246899999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 150 LYLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 150 ~~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
++|||+|.+++.+++.++++|+|+||++.
T Consensus 436 a~v~t~d~~~a~~~~~~l~aG~V~vN~~~ 464 (521)
T 4e4g_A 436 VAIYTRDGDAARDFASRINIGMVGVNVPI 464 (521)
T ss_dssp EEEECSBHHHHHHHHHHCCCSEEEESCSS
T ss_pred EEEECCCHHHHHHHHHhCCeeeEEECCCC
Confidence 99999999999999999999999999875
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=310.88 Aligned_cols=178 Identities=21% Similarity=0.392 Sum_probs=168.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|++++.+++.|+| ++.+++||++++.+++++
T Consensus 266 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 345 (508)
T 3r64_A 266 PFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGL 345 (508)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHH
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 468999999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .++++.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+
T Consensus 346 ~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 423 (508)
T 3r64_A 346 KEKIELAKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSK 423 (508)
T ss_dssp HHHHHHHHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECS
T ss_pred HHHHHHHHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcC
Confidence 99987 58999999975 6899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|.+++.+++.++++|+|+||+++.+
T Consensus 424 d~~~a~~~~~~l~aG~V~vN~~~~~ 448 (508)
T 3r64_A 424 DIDRAAQFALQIDSGMVHINDLTVN 448 (508)
T ss_dssp CHHHHHHHHTTSCSSEEEECC----
T ss_pred CHHHHHHHHHhCCcceEEEcCCCCC
Confidence 9999999999999999999998653
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=310.93 Aligned_cols=179 Identities=23% Similarity=0.391 Sum_probs=169.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+|++.+++||++++.+++++.
T Consensus 294 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~ 373 (516)
T 1uzb_A 294 AIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVL 373 (516)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHH
T ss_pred ceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999996689999999999999999
Q ss_pred HHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 81 SLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
++++ +| ++++||.. +..++|+.||++.++++++++++||+||||++|++|+|++||++++|+++|||+++|||+
T Consensus 374 ~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~ 452 (516)
T 1uzb_A 374 SYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSR 452 (516)
T ss_dssp HHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred HHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECC
Confidence 9996 45 88999875 346899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|.+++.+++.++++|+|+||++..+
T Consensus 453 d~~~a~~~~~~l~aG~v~iN~~~~~ 477 (516)
T 1uzb_A 453 KREHLEWARREFHVGNLYFNRKITG 477 (516)
T ss_dssp CHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred CHHHHHHHHHhCCEeEEEEeCCCCC
Confidence 9999999999999999999986543
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=311.02 Aligned_cols=177 Identities=19% Similarity=0.330 Sum_probs=168.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+|. +.+++||++++.+++++
T Consensus 277 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv 356 (515)
T 2d4e_A 277 PALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRV 356 (515)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHH
T ss_pred eEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999994 57999999999999999
Q ss_pred HHHHh----cCceeeeCCccCC---------CCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCC
Q psy11681 80 KSLVH----SSGTIALGGDMDA---------SDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPK 146 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~---------~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 146 (181)
.++++ +|+++++||.... .|+|++|||+.+ ++++++++||+||||++|++|+|.+||++++|+++|
T Consensus 357 ~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 435 (515)
T 2d4e_A 357 LGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKY 435 (515)
T ss_dssp HHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSC
T ss_pred HHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCC
Confidence 99986 6899999997543 589999999988 999999999999999999999999999999999999
Q ss_pred CceEEEeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 147 PLTLYLFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 147 gl~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+++|||+|.+++.+++.++++|+|+||++.
T Consensus 436 gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~ 467 (515)
T 2d4e_A 436 GLAAYVFTRDLERAHRLALELEAGMVYLNSHN 467 (515)
T ss_dssp CSEEEEECSBHHHHHHHHHHSCSSEEEESSSC
T ss_pred CceEEEECCCHHHHHHHHHhCCeeEEEECCCC
Confidence 99999999999999999999999999999864
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=313.86 Aligned_cols=178 Identities=21% Similarity=0.366 Sum_probs=169.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++||| ++.+++||+++..+++++
T Consensus 264 p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv 343 (517)
T 3r31_A 264 PMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKV 343 (517)
T ss_dssp EEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHH
T ss_pred eEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCc-cC---CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH----SSGTIALGGD-MD---ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~-~~---~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ +|+++++||. .+ ..++++.||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++
T Consensus 344 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~ 423 (517)
T 3r31_A 344 LSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGG 423 (517)
T ss_dssp HHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEE
T ss_pred HHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEE
Confidence 99987 5999999993 11 3689999999999999999999999999999999999999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
|||+|.+++.+++.++++|+|+||++.
T Consensus 424 v~t~d~~~a~~~~~~l~aG~V~iN~~~ 450 (517)
T 3r31_A 424 VFTADLARAHRVVDGLEAGTLWINTYN 450 (517)
T ss_dssp EECSCHHHHHHHHHHSCCSEEEESSCC
T ss_pred EEeCCHHHHHHHHHHCCcceEEECCCC
Confidence 999999999999999999999999964
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=307.63 Aligned_cols=178 Identities=20% Similarity=0.334 Sum_probs=170.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||+++||+|+++|++++.+++.|+| ++.+++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||.. +..++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 99886 69999999864 45789999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
+|.+++.+++.++++|+|+||++.
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~ 423 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYS 423 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCC
T ss_pred CCHHHHHHHHHhCCcceEEECCCC
Confidence 999999999999999999999864
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=309.15 Aligned_cols=179 Identities=17% Similarity=0.300 Sum_probs=169.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.|+|. +.+++||++++.+++++
T Consensus 275 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv 354 (500)
T 2j6l_A 275 AIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMF 354 (500)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999994 58999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||.. +..|+|++||++.++++++++++||+||||++|++|+|++||++++|+++|||+++|||
T Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 434 (500)
T 2j6l_A 355 LGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFT 434 (500)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEEC
T ss_pred HHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEEC
Confidence 99986 58999999975 34688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHH--hhcceeeEEECCccc
Q psy11681 155 SNAQVQELFI--HQTHSGSMCINDTVM 179 (181)
Q Consensus 155 ~d~~~~~~~~--~~~~~g~v~iN~~~~ 179 (181)
+|.+++.+++ .++++|+|+||++..
T Consensus 435 ~d~~~a~~~~~~~~~~~G~V~vN~~~~ 461 (500)
T 2j6l_A 435 KDLGRIFRWLGPKGSDCGIVNVNIPTS 461 (500)
T ss_dssp CCHHHHHHHHSTTSCCSSEEEESSCTT
T ss_pred CCHHHHHHHHhhccCCeeEEEECCCCc
Confidence 9999999999 679999999998653
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=309.22 Aligned_cols=175 Identities=26% Similarity=0.414 Sum_probs=167.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++||| +.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++||| ++.+++||+++..+++++
T Consensus 276 p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v 354 (497)
T 3i44_A 276 ANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKI 354 (497)
T ss_dssp EEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHH
T ss_pred ceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHH
Confidence 689999999 999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCc-cC---CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH----SSGTIALGGD-MD---ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~-~~---~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ +|+++++||. .. ..|+|++|||+.++++++++++||+||||++|++|+|++||++++|+++|||+++
T Consensus 355 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~ 434 (497)
T 3i44_A 355 QDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNY 434 (497)
T ss_dssp HHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEE
Confidence 99986 6999999994 32 2689999999999999999999999999999999999999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECC
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCIND 176 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~ 176 (181)
|||+|.+++.+++.++++|+|+||.
T Consensus 435 v~t~d~~~a~~~a~~l~aG~V~iN~ 459 (497)
T 3i44_A 435 IQSQDRSKCRRIAAQVRSGMVEVNG 459 (497)
T ss_dssp EECSCHHHHHHHHHHSCCSEEEETT
T ss_pred EECCCHHHHHHHHHhCCcCeEEECC
Confidence 9999999999999999999999995
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=309.45 Aligned_cols=178 Identities=22% Similarity=0.368 Sum_probs=165.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||+++||+|+++|++++.+++.|+| ++.+++||+++..+++++
T Consensus 259 p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 338 (485)
T 4dng_A 259 PFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKA 338 (485)
T ss_dssp EEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHH
T ss_pred ceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 468999999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
.++++ +|+++++||.. .|+|++||++.++++++++++||+||||++|++|+|++||++++|+++|||+++|||+
T Consensus 339 ~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~ 416 (485)
T 4dng_A 339 LEIIEQAKTDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTS 416 (485)
T ss_dssp HHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred HHHHHHHHHCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECC
Confidence 99986 59999999975 6899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|.+++.+++.++++|+|+||++..+
T Consensus 417 d~~~a~~~~~~l~~G~v~vN~~~~~ 441 (485)
T 4dng_A 417 DLEKGEKFALQIDSGMTHVNDQSVN 441 (485)
T ss_dssp CHHHHHHHHTTSCSSEEEESCC---
T ss_pred CHHHHHHHHHhcCcceEEECCCCCC
Confidence 9999999999999999999998643
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=306.66 Aligned_cols=177 Identities=21% Similarity=0.292 Sum_probs=169.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.|||.+.+++||+++..+++++.
T Consensus 256 p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~ 335 (475)
T 1euh_A 256 SAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVE 335 (475)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999995589999999999999999
Q ss_pred HHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCc
Q psy11681 81 SLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d 156 (181)
++++ +|+++++||.. .++|++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+|
T Consensus 336 ~~i~~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d 413 (475)
T 1euh_A 336 GLINDANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTND 413 (475)
T ss_dssp HHHHHHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSC
T ss_pred HHHHHHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCC
Confidence 9986 58999999865 58999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECC-ccc
Q psy11681 157 AQVQELFIHQTHSGSMCIND-TVM 179 (181)
Q Consensus 157 ~~~~~~~~~~~~~g~v~iN~-~~~ 179 (181)
.+++.+++.++++|+|+||+ +..
T Consensus 414 ~~~~~~~~~~l~~G~v~vN~~~~~ 437 (475)
T 1euh_A 414 FPRAFGIAEQLEVGTVHINNKTQR 437 (475)
T ss_dssp HHHHHHHHHHSCSSEEEESSCCCC
T ss_pred HHHHHHHHHhCCEeeEEECCCCCC
Confidence 99999999999999999998 543
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-45 Score=304.41 Aligned_cols=176 Identities=23% Similarity=0.378 Sum_probs=168.3
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|++++.+++.|+| ++.+++||+++..+++++
T Consensus 254 p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 333 (478)
T 3ty7_A 254 PYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQV 333 (478)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred CcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-C---CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH----SSGTIALGGDM-D---ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~---~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ +|+++++||.. . ..+++++||++.++++++++++||+||||++|++|+|.+||++++|+++|||+++
T Consensus 334 ~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~ 413 (478)
T 3ty7_A 334 QNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGY 413 (478)
T ss_dssp HHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEE
T ss_pred HHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEE
Confidence 99987 59999999842 2 3689999999999999999999999999999999999999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECC
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCIND 176 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~ 176 (181)
|||+|.+++.+++.++++|+|+||+
T Consensus 414 v~t~d~~~a~~~~~~l~~G~v~vN~ 438 (478)
T 3ty7_A 414 VIGKDKETLHKVARSIEAGTVEINE 438 (478)
T ss_dssp EECSCHHHHHHHHHHSCSSEEEETT
T ss_pred EECCCHHHHHHHHHhCCcCeEEECC
Confidence 9999999999999999999999998
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=308.10 Aligned_cols=175 Identities=20% Similarity=0.335 Sum_probs=168.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCC-CCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ-GSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|+|++|+|||+++||+|+++|++++.++++|||. +.+++||++++.+++++
T Consensus 269 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv 348 (501)
T 1uxt_A 269 PAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEM 348 (501)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999994 68999999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCC-ceeccEEEecCC---CCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEE
Q psy11681 80 KSLVH----SSGTIALGGDMDASD-RFISPTILVDVK---PTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLY 151 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~-~~~~Pti~~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~ 151 (181)
.++++ +|+++++||.. .+ +|++||++.+++ ++|++++||+||||++|++|+|.+||++++|+++|||+++
T Consensus 349 ~~~i~~a~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~ 426 (501)
T 1uxt_A 349 MAAIEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAA 426 (501)
T ss_dssp HHHHHHHHHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEE
T ss_pred HHHHHHHHHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEE
Confidence 99986 58999999975 57 899999999999 9999999999999999999999999999999999999999
Q ss_pred EeeCcHHHHHHHHhhcceeeEEECCc
Q psy11681 152 LFSSNAQVQELFIHQTHSGSMCINDT 177 (181)
Q Consensus 152 i~s~d~~~~~~~~~~~~~g~v~iN~~ 177 (181)
|||+|.+++.+++.++++|+|+||++
T Consensus 427 v~t~d~~~a~~~~~~l~~G~V~iN~~ 452 (501)
T 1uxt_A 427 VFGRDVVKIRRAVRLLEVGAIYINDM 452 (501)
T ss_dssp EECCCHHHHHHHHHHCCSSEEEETSC
T ss_pred EeCCCHHHHHHHHHhCCEeeEEEeCC
Confidence 99999999999999999999999987
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=303.01 Aligned_cols=178 Identities=22% Similarity=0.277 Sum_probs=168.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEcccc-HHHHHHHHHHHhhcccccC-C-CCCccccccccHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQV-QAQILNQAKAVLDSWYTEQ-V-QGSKHYCRIVSDKHFQ 77 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~-~d~f~~~l~~~~~~~~~g~-~-~~~~~~g~l~~~~~~~ 77 (181)
|+||++|||++.|++.+++++|+|+||.|++++|+|||+++ ||+|+++|++++.+++.|+ | ++.+++||+++..+++
T Consensus 254 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~ 333 (490)
T 3ju8_A 254 PLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAE 333 (490)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHH
Confidence 68999999999999999999999999999999999999997 9999999999999999998 7 5689999999999999
Q ss_pred HHHHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 78 RLKSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 78 ~~~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
++.++++ +|+++++||.. +..++|++||++. +++++++++||+||||++|++|+|.+||++++|+++|||+++|
T Consensus 334 ~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v 412 (490)
T 3ju8_A 334 HLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGL 412 (490)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEE
Confidence 9999986 69999999864 3578999999998 9999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
||+|.+++.+++.++++|+|+||++..
T Consensus 413 ~t~d~~~a~~~~~~l~aG~v~vN~~~~ 439 (490)
T 3ju8_A 413 LSDSRERFEQFLVESRAGIVNWNKQLT 439 (490)
T ss_dssp ECSCHHHHHHHHHHCCSSEEEESSCSS
T ss_pred EcCCHHHHHHHHHhcCcceEEECCCcC
Confidence 999999999999999999999998754
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=308.17 Aligned_cols=180 Identities=22% Similarity=0.353 Sum_probs=168.8
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-C-CCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-Q-GSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~-~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|+++++++++||| . +.+++||++++.++++
T Consensus 320 p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~r 399 (563)
T 4e3x_A 320 FHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFAR 399 (563)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHH
T ss_pred ceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999998 5 5899999999999999
Q ss_pred HHHHHh-----cCceeeeCCccC-CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCC--HHHHHHHH-hcCCCCce
Q psy11681 79 LKSLVH-----SSGTIALGGDMD-ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVES--AFEAIQFI-NARPKPLT 149 (181)
Q Consensus 79 ~~~~~~-----~ga~~~~gg~~~-~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~ 149 (181)
+.++++ +|+++++||..+ ..|+|++|||+.++++++++++||+||||++|++|+| ++||++++ |+++|||+
T Consensus 400 v~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLt 479 (563)
T 4e3x_A 400 IKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLT 479 (563)
T ss_dssp HHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESE
T ss_pred HHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCE
Confidence 999986 488999999753 4689999999999999999999999999999999997 79999999 78999999
Q ss_pred EEEeeCcHHHHHHHHhhcc--eeeEEECCcccc
Q psy11681 150 LYLFSSNAQVQELFIHQTH--SGSMCINDTVMH 180 (181)
Q Consensus 150 ~~i~s~d~~~~~~~~~~~~--~g~v~iN~~~~~ 180 (181)
++|||+|.+++.+++.+++ +|+|+||+++++
T Consensus 480 a~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~ 512 (563)
T 4e3x_A 480 GAVFAQDKAIVQEATRMLRNAAGNFYINDKSTG 512 (563)
T ss_dssp EEEECSCHHHHHHHHHHTTTTCSEEEESSCSCC
T ss_pred EEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCC
Confidence 9999999999999999865 999999997643
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=301.22 Aligned_cols=175 Identities=33% Similarity=0.612 Sum_probs=165.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++ |.+. ++||+++..+++++.
T Consensus 242 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~ 317 (457)
T 3lns_A 242 PLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLV 317 (457)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHH
T ss_pred CCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999999887 5444 999999999999999
Q ss_pred HHHhc-CceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhc-CCCCceEEEeeCcHH
Q psy11681 81 SLVHS-SGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINA-RPKPLTLYLFSSNAQ 158 (181)
Q Consensus 81 ~~~~~-ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~i~s~d~~ 158 (181)
+++++ ++++++||..+..++++.||++.++++++++++||+||||++|++|+|.+||++++|+ ++|||+++|||+|.+
T Consensus 318 ~~i~~a~~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~ 397 (457)
T 3lns_A 318 SLLEATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMD 397 (457)
T ss_dssp HHHHHCCSEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHH
T ss_pred HHHHhcCCeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHH
Confidence 99984 4699999976557899999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHhhcceeeEEECCccc
Q psy11681 159 VQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 159 ~~~~~~~~~~~g~v~iN~~~~ 179 (181)
++.+++.++++|+|+||++..
T Consensus 398 ~a~~~~~~l~aG~v~vN~~~~ 418 (457)
T 3lns_A 398 VAKGIINQIQSGDAQVNGVML 418 (457)
T ss_dssp HHHHHHHTSCCSEEEESCCSG
T ss_pred HHHHHHHhCCcceEEEcCCCC
Confidence 999999999999999999754
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-44 Score=302.66 Aligned_cols=178 Identities=13% Similarity=0.223 Sum_probs=166.7
Q ss_pred CeEEeCCC-----CHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHH
Q psy11681 1 PLYIDSSV-----NIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDK 74 (181)
Q Consensus 1 p~iV~~da-----Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~ 74 (181)
|+||++|| |++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++||| ++.+++||++++.
T Consensus 266 p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~ 345 (534)
T 2y53_A 266 SAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSRE 345 (534)
T ss_dssp EEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHH
T ss_pred eEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHH
Confidence 68999999 99999999999999999999999999999999999999999999999999999 4689999999999
Q ss_pred HHHHHHHHHh---cCceeeeCCccC-------CCCceeccEEEecCCCC--CCCcCcccccceeeeEEeC---CH-----
Q psy11681 75 HFQRLKSLVH---SSGTIALGGDMD-------ASDRFISPTILVDVKPT--DPIMGEEIFGPILPIINVE---SA----- 134 (181)
Q Consensus 75 ~~~~~~~~~~---~ga~~~~gg~~~-------~~~~~~~Pti~~~~~~~--~~~~~~E~fgPvl~v~~~~---~~----- 134 (181)
+++++.++++ +|+++++||... ..|+|++|||+.+++++ +++++||+||||++|++|+ |.
T Consensus 346 ~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~ 425 (534)
T 2y53_A 346 QYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPE 425 (534)
T ss_dssp HHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTT
T ss_pred HHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCH
Confidence 9999999997 589999998632 35899999999988876 6899999999999999999 99
Q ss_pred HHHHHHHhcCCCCceEEEeeCcHHHHHHHHhhc--ceeeEEECCcc
Q psy11681 135 FEAIQFINARPKPLTLYLFSSNAQVQELFIHQT--HSGSMCINDTV 178 (181)
Q Consensus 135 ~eai~~~n~~~~gl~~~i~s~d~~~~~~~~~~~--~~g~v~iN~~~ 178 (181)
+||++++|+++|||+++|||+|.+++.+++.++ ++|+|+||++.
T Consensus 426 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~ 471 (534)
T 2y53_A 426 AHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPS 471 (534)
T ss_dssp HHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGG
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCc
Confidence 999999999999999999999999999999999 89999999864
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=300.97 Aligned_cols=177 Identities=20% Similarity=0.288 Sum_probs=168.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCE-EEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDY-ILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQR 78 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~-v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~ 78 (181)
|+||++|||++.|++.+++++|.|+||.|++++| +|||++ ||+|+++|+++++++++|+| ++.+++||+++..++++
T Consensus 255 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~ 333 (486)
T 1t90_A 255 HTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKR 333 (486)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHH
T ss_pred cEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHH
Confidence 6899999999999999999999999999999999 999999 99999999999999999998 56899999999999999
Q ss_pred HHHHHh----cCceeeeCCccC--CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 79 LKSLVH----SSGTIALGGDMD--ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 79 ~~~~~~----~ga~~~~gg~~~--~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
+.++++ +|+++++||... ..++|+.||++.++++++++++||+||||++|++|+|++||++++|+++|||+++|
T Consensus 334 v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v 413 (486)
T 1t90_A 334 TLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACL 413 (486)
T ss_dssp HHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEE
T ss_pred HHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEE
Confidence 999986 599999998632 35899999999999999999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTV 178 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~ 178 (181)
||+|.+++.+++.++++|+|+||++.
T Consensus 414 ~t~d~~~a~~~~~~l~aG~v~vN~~~ 439 (486)
T 1t90_A 414 FTSNSNAIRYFRENIDAGMLGINLGV 439 (486)
T ss_dssp ECCBHHHHHHHHHHCCCSEEEESCSC
T ss_pred EcCCHHHHHHHHHhCCcCeEEECCCC
Confidence 99999999999999999999999853
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=313.47 Aligned_cols=179 Identities=21% Similarity=0.307 Sum_probs=170.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|.|+||.|+|++++|||+++||+|+++|++++.++++|+| ++.+++||+++..+++++
T Consensus 787 p~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v 866 (1026)
T 4f9i_A 787 AIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSI 866 (1026)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccCCC-CceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDMDAS-DRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~-~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +| ++++||..+.. |+|+.|||+.++++++.+++||+||||++|++|+|++||++++|+++|||+++|||
T Consensus 867 ~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t 945 (1026)
T 4f9i_A 867 KEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFS 945 (1026)
T ss_dssp HHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEEC
T ss_pred HHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEC
Confidence 99987 36 99999875544 89999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+|.+.+.+++.++++|+|+||+.+++
T Consensus 946 ~d~~~a~~~~~~l~aG~v~IN~~~~~ 971 (1026)
T 4f9i_A 946 RSPEHLAKARREFRVGNLYINRNNTG 971 (1026)
T ss_dssp CCHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred CCHHHHHHHHHhCCEeeEEEcCCCCC
Confidence 99999999999999999999997654
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=300.77 Aligned_cols=177 Identities=18% Similarity=0.251 Sum_probs=164.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|.|+||.|++++++|||+++||+|+++|++++.++++|+| ++.+++||+++..+.+++
T Consensus 766 p~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv 845 (1001)
T 3haz_A 766 AMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRL 845 (1001)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred eEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh---cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCC--HHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH---SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVES--AFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~---~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +.+++ +||..+..|+|+.||++.. +++.+++||+||||++|++|++ ++||++++|+++|||+++|||
T Consensus 846 ~~~i~~a~~~g~v-~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T 922 (1001)
T 3haz_A 846 DAHIARMKTEARL-HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHS 922 (1001)
T ss_dssp HHHHHHHHHHSEE-EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEEC
T ss_pred HHHHHHHHhcCeE-eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEc
Confidence 99987 23388 8887666799999999964 5778899999999999999996 799999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+|.+++.+++.++++|+|+||+++++
T Consensus 923 ~d~~~a~~~a~~l~aG~V~VN~~~~~ 948 (1001)
T 3haz_A 923 RIDDSIEAIIDRVQVGNIYVNRNMIG 948 (1001)
T ss_dssp SCHHHHHHHHHHCCCSEEEESSCSCC
T ss_pred CCHHHHHHHHHhCCeeeEEEeCCCcC
Confidence 99999999999999999999997654
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=281.91 Aligned_cols=172 Identities=16% Similarity=0.199 Sum_probs=160.6
Q ss_pred CeEEeCCC---CHHHHHHHHHHHhchhcCCccccCCEEEEccc-cHHHHHHHHHHHhhcccccCCCCCccccccccHHHH
Q psy11681 1 PLYIDSSV---NIELAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHF 76 (181)
Q Consensus 1 p~iV~~da---Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~-~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~ 76 (181)
|+||++|| |++.|++.+++++|.|+||.|+|++|+|||++ +||+|+++|++++.+++. .+.+||+++..+.
T Consensus 292 p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~-----~~~~gp~~~~~~~ 366 (528)
T 3v4c_A 292 PMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAP-----QTMLTDGIAKAYR 366 (528)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCC-----EECSCHHHHHHHH
T ss_pred eEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhccc-----CCCCCHHHHHHHH
Confidence 78999999 88999999999999999999999999999997 999999999999998864 3579999999999
Q ss_pred HHHHHHHh-cCceeeeCCccCCCCceeccEEEecCCCC---CCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 77 QRLKSLVH-SSGTIALGGDMDASDRFISPTILVDVKPT---DPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 77 ~~~~~~~~-~ga~~~~gg~~~~~~~~~~Pti~~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
+++.+++. +|+++++||.. .|+|+.||++.+++++ +++++||+||||++|++|+|.+||++++|+++|||+++|
T Consensus 367 ~~v~~~~~~~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v 444 (528)
T 3v4c_A 367 DGQARFATRNAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATI 444 (528)
T ss_dssp HHHHHHHTCTTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHHHhCCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEE
Confidence 99999887 79999999974 6899999999877776 899999999999999999999999999999999999999
Q ss_pred eeC--cHHHHHHHHhhcc--eeeEEECCccc
Q psy11681 153 FSS--NAQVQELFIHQTH--SGSMCINDTVM 179 (181)
Q Consensus 153 ~s~--d~~~~~~~~~~~~--~g~v~iN~~~~ 179 (181)
||+ |.+++.+++.+++ +|+|+||++++
T Consensus 445 ~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~ 475 (528)
T 3v4c_A 445 HMDAGDLETARRLRPVLERKAGRVLVNGFPT 475 (528)
T ss_dssp ECCGGGHHHHHHHHHHHHHHEEEEEESSCTT
T ss_pred EcCCCCHHHHHHHHHHHhhcCcEEEEcCCCC
Confidence 999 8999999999998 99999999754
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=273.77 Aligned_cols=167 Identities=15% Similarity=0.228 Sum_probs=148.8
Q ss_pred CeEEeCCCCHH--HHHHHHHHHhchhcCCccccCCEEEEccc-cHHHHHHHHHHHhhcccccCCCCCccccccccHHHHH
Q psy11681 1 PLYIDSSVNIE--LAVRRFLWGKCINAGQTCIAPDYILCSRQ-VQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQ 77 (181)
Q Consensus 1 p~iV~~daDl~--~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~-~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~ 77 (181)
|+||++|||++ .|++.+++++|.|+||.|++++|+|||++ +||+|+++|++++.+++. ||++++...+
T Consensus 259 p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~~~~~~ 329 (510)
T 1ez0_A 259 PTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLTPGIRD 329 (510)
T ss_dssp EEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSSHHHHH
T ss_pred eEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCCHHHHH
Confidence 68999999999 99999999999999999999999999999 999999999999998864 3455555554
Q ss_pred HH----HHHHh-cCceeeeCCccCCCCceeccEEEecCCCC---CCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCce
Q psy11681 78 RL----KSLVH-SSGTIALGGDMDASDRFISPTILVDVKPT---DPIMGEEIFGPILPIINVESAFEAIQFINARPKPLT 149 (181)
Q Consensus 78 ~~----~~~~~-~ga~~~~gg~~~~~~~~~~Pti~~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 149 (181)
++ .++++ +|+++++||. .|+|+.||++.+++++ +++++||+||||++|++|+|.+||++++|+++|||+
T Consensus 330 ~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLa 406 (510)
T 1ez0_A 330 SYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLT 406 (510)
T ss_dssp HHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeE
Confidence 44 44443 6899999987 3899999999877666 899999999999999999999999999999999999
Q ss_pred EEEeeCcH--HHHHHHHhhc--ceeeEEECCccc
Q psy11681 150 LYLFSSNA--QVQELFIHQT--HSGSMCINDTVM 179 (181)
Q Consensus 150 ~~i~s~d~--~~~~~~~~~~--~~g~v~iN~~~~ 179 (181)
++|||+|. +++.+++.++ ++|+|+||++..
T Consensus 407 a~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~ 440 (510)
T 1ez0_A 407 ATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPT 440 (510)
T ss_dssp EEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSS
T ss_pred EEEEccCcCHHHHHHHHHHHhhcccEEEECCCCc
Confidence 99999987 7999999999 799999998653
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=267.14 Aligned_cols=165 Identities=18% Similarity=0.266 Sum_probs=150.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhh-------cccccCC--CCCccccccc
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLD-------SWYTEQV--QGSKHYCRIV 71 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~-------~~~~g~~--~~~~~~g~l~ 71 (181)
|+||++|||++.|++.+++|+|+|+||.|+|++++|||+++||+|+++|+++.. .++.|+| ++.+++||++
T Consensus 223 p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i 302 (464)
T 3k9d_A 223 PAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAI 302 (464)
T ss_dssp EEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGG
T ss_pred eEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCccc
Confidence 789999999999999999999999999999999999999999999999999874 3456676 3578999999
Q ss_pred cHHHHHHHHHHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHH----HHHhc
Q psy11681 72 SDKHFQRLKSLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAI----QFINA 143 (181)
Q Consensus 72 ~~~~~~~~~~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~ 143 (181)
+..+++++.++++ +|+++++||.. ++++++++ .+|+||||++|++|+|++||+ +++|.
T Consensus 303 ~~~~~~~i~~~~~~a~~~ga~vl~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~ 368 (464)
T 3k9d_A 303 VGKSVQHIANLAGLTVPADARVLIAEET-------------KVGAKIPY-SREKLAPILAFYTAETWQEACELSMDILYH 368 (464)
T ss_dssp TTCCHHHHHHHTTCCCCTTCCEEEEECC-------------CCSTTCGG-GSCCCSSEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhhcCCCEEEEcCCC-------------CCCCCCcc-cccccCceEEEEEeCCHHHHHHHHHHHHhc
Confidence 9999999999987 58899998852 45667775 589999999999999999997 78999
Q ss_pred CCCCceEEEeeCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 144 RPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 144 ~~~gl~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
++|||+++|||+|.+++.+++.++++|+|+||++..
T Consensus 369 ~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~ 404 (464)
T 3k9d_A 369 EGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGA 404 (464)
T ss_dssp TTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHH
T ss_pred CCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCcc
Confidence 999999999999999999999999999999999875
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=261.57 Aligned_cols=164 Identities=16% Similarity=0.247 Sum_probs=145.1
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++|+|+|+||.|+|++++|||+++||+|+++|+++ .||++++.+.+++.
T Consensus 218 p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~ 283 (452)
T 3my7_A 218 PVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVR 283 (452)
T ss_dssp EEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHH
T ss_pred eEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999775 38899999999999
Q ss_pred HHHh----cCceeeeCCccC----CCCceeccEE-------EecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCC
Q psy11681 81 SLVH----SSGTIALGGDMD----ASDRFISPTI-------LVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARP 145 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~~~----~~~~~~~Pti-------~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 145 (181)
+++. .|+++ .||... ..|.+++||+ +.++++++++.+ |+||||++|++|+|++||++++|++.
T Consensus 284 ~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~ 361 (452)
T 3my7_A 284 KVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMV 361 (452)
T ss_dssp HHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcc
Confidence 9997 25565 466432 3588999997 567888888765 89999999999999999999999974
Q ss_pred ----CCceEEEeeCcHHHHHH---HHhhcceeeEEECCcccc
Q psy11681 146 ----KPLTLYLFSSNAQVQEL---FIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 146 ----~gl~~~i~s~d~~~~~~---~~~~~~~g~v~iN~~~~~ 180 (181)
+||+++|||+|.+++.+ ++.++++|+|+||++..+
T Consensus 362 ~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~ 403 (452)
T 3my7_A 362 EIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTH 403 (452)
T ss_dssp HHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC-
T ss_pred cccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCC
Confidence 99999999999777766 999999999999998654
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=251.97 Aligned_cols=153 Identities=17% Similarity=0.117 Sum_probs=120.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccc---cCCCCCccccccccHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT---EQVQGSKHYCRIVSDKHFQ 77 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~---g~~~~~~~~g~l~~~~~~~ 77 (181)
|+||++|||++.|++.+++++|.|+| .|+|++|+|||+++ |+|+++|++++.++++ |||.+
T Consensus 243 p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-------------- 306 (468)
T 1vlu_A 243 SIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-------------- 306 (468)
T ss_dssp EEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH--------------
T ss_pred ceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH--------------
Confidence 68999999999999999999999999 99999999999999 9999999999999876 66522
Q ss_pred HHHHH-HhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCc
Q psy11681 78 RLKSL-VHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156 (181)
Q Consensus 78 ~~~~~-~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d 156 (181)
.++ ++++.++++||. | +.||++ +++++.+++||+||||++|++|+|++||++++|+++|||+++|||+|
T Consensus 307 --~~~~i~~a~~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 376 (468)
T 1vlu_A 307 --KTAYFDKLNELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTEN 376 (468)
T ss_dssp --HHHHHHHHHHHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSC
T ss_pred --hcccccccceeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCC
Confidence 122 332224667775 3 789886 67889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCccc
Q psy11681 157 AQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 157 ~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
.+++.+++.++++|+|+||++..
T Consensus 377 ~~~a~~~~~~l~aG~V~vN~~~~ 399 (468)
T 1vlu_A 377 KANAEKFMKGVDSSGVYWNASTR 399 (468)
T ss_dssp HHHHHHHHHHCCCSEEEESSCGG
T ss_pred HHHHHHHHHhCCeeEEEEcCCCC
Confidence 99999999999999999998654
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=232.78 Aligned_cols=144 Identities=19% Similarity=0.243 Sum_probs=114.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccc---cCCCCCccccccccHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT---EQVQGSKHYCRIVSDKHFQ 77 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~---g~~~~~~~~g~l~~~~~~~ 77 (181)
|+||++|||++.|++.+++++|.|+| .|+|++|+|||+++||+|+++|++++.+++. |+|.
T Consensus 252 p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~--------------- 315 (444)
T 4ghk_A 252 HVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD--------------- 315 (444)
T ss_dssp EEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH---------------
T ss_pred eEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH---------------
Confidence 78999999999999999999999999 9999999999999999999999999998876 5541
Q ss_pred HHHHHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcH
Q psy11681 78 RLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNA 157 (181)
Q Consensus 78 ~~~~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~ 157 (181)
..++++.. + . | ++ +++++++++||+||||++|++|+|++||++++|+++|||++||||+|.
T Consensus 316 -~~~~i~~a-~---~------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 376 (444)
T 4ghk_A 316 -ARAVLEAA-G---V------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDH 376 (444)
T ss_dssp -HHHHHHHT-T---C------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBH
T ss_pred -HHHHHHhc-c---c------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCH
Confidence 12344421 1 1 1 11 245688999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCccc
Q psy11681 158 QVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 158 ~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
+++.+++.++++|+|+||+++.
T Consensus 377 ~~a~~~a~~l~aG~V~vN~~~~ 398 (444)
T 4ghk_A 377 DRAMRFLREVDSASVMVNASTR 398 (444)
T ss_dssp HHHHHHHHHCCSSEEEEEECGG
T ss_pred HHHHHHHHhCCcceEEEcCCCc
Confidence 9999999999999999998754
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-34 Score=234.16 Aligned_cols=142 Identities=19% Similarity=0.299 Sum_probs=124.2
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.|+| .|+|++|+|||+++||+|+++|++++++++.+
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------- 297 (427)
T 1o20_A 240 HIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------------- 297 (427)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------
T ss_pred eEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------
Confidence 78999999999999999999999999 99999999999999999999999999987532
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
+.||... .+ ++ ||+. ++++.+++||+||||++|++|+|.+||++++|+++|||+++|||+|.+++
T Consensus 298 ---------~~gg~~~-~~-~~-Ptl~---~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 362 (427)
T 1o20_A 298 ---------VRGCEKT-RE-IV-PDVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNA 362 (427)
T ss_dssp ---------EEECHHH-HH-HS-TTSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHH
T ss_pred ---------eecChhh-hh-hC-Cccc---CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHH
Confidence 1122110 01 23 7752 34678999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCccc
Q psy11681 161 ELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~ 179 (181)
.+++.++++|+|+||++..
T Consensus 363 ~~~~~~l~~G~V~iN~~~~ 381 (427)
T 1o20_A 363 KKFVSEIDAAAVYVNASTR 381 (427)
T ss_dssp HHHHHHCCSSEEEESSCGG
T ss_pred HHHHHhCCccEEEECCCCc
Confidence 9999999999999998653
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=228.50 Aligned_cols=141 Identities=19% Similarity=0.240 Sum_probs=115.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHH-
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRL- 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~- 79 (181)
|+||++|||++.|++.+++++|.| ||.|++++|+|||+++|| ||+ ++++
T Consensus 253 p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------~p~-----~~~~i 302 (463)
T 2h5g_A 253 HMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------TPL-----FDQII 302 (463)
T ss_dssp EEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------SHH-----HHHHH
T ss_pred eEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------hHH-----HHHHH
Confidence 689999999999999999999999 999999999999999998 122 2232
Q ss_pred HHHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHH
Q psy11681 80 KSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQV 159 (181)
Q Consensus 80 ~~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~ 159 (181)
...+++|++++.|+.....+++ +++++++++||+||||++|++|+|++||++++|+.++||+++|||+|.++
T Consensus 303 ~~~~~~Ga~v~~G~~~~~~g~~--------~~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 374 (463)
T 2h5g_A 303 DMLRVEQVKIHAGPKFASYLTF--------SPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENT 374 (463)
T ss_dssp HHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHH
T ss_pred HHHHhCCCEEEeCCcccccCcc--------CCCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHH
Confidence 2334579998855432222332 25789999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCccc
Q psy11681 160 QELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 160 ~~~~~~~~~~g~v~iN~~~~ 179 (181)
+.+++.++++|+|+||++..
T Consensus 375 a~~~~~~l~aG~V~iN~~~~ 394 (463)
T 2h5g_A 375 AEFFLQHVDSACVFWNASTR 394 (463)
T ss_dssp HHHHHHHCCSSEEEESSCGG
T ss_pred HHHHHHhCCeeEEEEeCCcc
Confidence 99999999999999998653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 181 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-34 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-33 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 3e-32 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-32 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-29 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 8e-27 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 3e-21 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 3e-21 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-10 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-09 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 123 bits (309), Expect = 4e-34
Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 6/186 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-E 59
P I S +++ AV + + N GQ A + + + ++ A S
Sbjct: 268 PNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 327
Query: 60 QVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD-RFISPTILVDVKPTD 114
V + F+++ +++ + GG + A FI PT+ DV+
Sbjct: 328 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGM 387
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
I EEIFGP++ I+ ++ E + N L +F+ + +G++ +
Sbjct: 388 TIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWV 447
Query: 175 NDTVMH 180
N +
Sbjct: 448 NCYDVF 453
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 121 bits (304), Expect = 3e-33
Identities = 36/192 (18%), Positives = 70/192 (36%), Gaps = 12/192 (6%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-E 59
PL I +E AVR L + GQ C + R++ Q L + + +
Sbjct: 269 PLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGD 328
Query: 60 QVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASDR-------FISPTILV 108
+ ++S ++ V + + GG+ F+SP +L
Sbjct: 329 PLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLD 388
Query: 109 DVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTH 168
+ + + EEIFGP++ ++ ++ E +Q N L +F+ +
Sbjct: 389 NCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLE 448
Query: 169 SGSMCINDTVMH 180
+G+ IN +
Sbjct: 449 AGTCYINTYSIS 460
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 118 bits (296), Expect = 3e-32
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 3 YIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQ 62
+D + + +LA + GQ C A ++ ++ +L + + +
Sbjct: 296 IVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAE 355
Query: 63 GSKHYCRIVSDKHFQRLKSLVH---SSGTIALGGD-MDASDRFISPTILVDVKPTDPIMG 118
+ +VS + +++ S + + G + LGG ++ FI+PT+ +V P I
Sbjct: 356 ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQ 415
Query: 119 EEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTV 178
EEIFGP+L +I V+ EA++ N P LT ++S + E + H G++ N +
Sbjct: 416 EEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKI 475
Query: 179 MHY 181
Sbjct: 476 TGA 478
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 118 bits (296), Expect = 3e-32
Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSW-YTE 59
P + + +++ AV G + GQ CIA + + + + ++ +
Sbjct: 268 PCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 327
Query: 60 QVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD-RFISPTILVDVKPTD 114
+ + + ++++ L+ S + GG + FI PT+ DV
Sbjct: 328 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDM 387
Query: 115 PIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCI 174
I EEIFGP+ I+ +S + I+ N L+ +F+++ SG++ +
Sbjct: 388 RIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWV 447
Query: 175 NDTVMH 180
N +
Sbjct: 448 NCYSVV 453
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 109 bits (273), Expect = 3e-29
Identities = 89/181 (49%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
P Y+D ++++A RR WGK +N+GQTC+APDYILC +Q QI+ + K L +Y E
Sbjct: 214 PCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGED 273
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEE 120
+ S+ Y RI++D+HFQR+K + + +A GG D S R+I+PTILVDV P P+M EE
Sbjct: 274 AKQSRDYGRIINDRHFQRVKG-LIDNQKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEE 332
Query: 121 IFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
IFGP++PI+ V S EAIQFIN R KPL LY+FS+N +V + I +T SG + ND ++H
Sbjct: 333 IFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVH 392
Query: 181 Y 181
Sbjct: 393 I 393
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 103 bits (257), Expect = 8e-27
Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 2/182 (1%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 60
+ ++EL + + G +GQ C A +L V +++ + + + +
Sbjct: 255 SAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 314
Query: 61 VQGSKHYCRIVSDKHFQRLKSLVHSSGT--IALGGDMDASDRFISPTILVDVKPTDPIMG 118
+ ++ K ++ L++ + ++ I P + V +
Sbjct: 315 PEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAW 374
Query: 119 EEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTV 178
EE FGP+LPII V S EAI+ N L +F+++ Q G++ IN+
Sbjct: 375 EEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKT 434
Query: 179 MH 180
Sbjct: 435 QR 436
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 87.6 bits (216), Expect = 3e-21
Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 7/187 (3%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQ-----AKAVLDS 55
P+ + +IE V NAGQ C A I + + ++ + A +
Sbjct: 252 PVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGA 311
Query: 56 WYTEQVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDM--DASDRFISPTILVDVKPT 113
E + ++ + ++ + + G + + +PT+L
Sbjct: 312 PDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQD 371
Query: 114 DPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMC 173
D I+ +E+FGP++ + ++ + + + N L +++ + + G
Sbjct: 372 DAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW 431
Query: 174 INDTVMH 180
+N M
Sbjct: 432 VNTHFML 438
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 87.7 bits (216), Expect = 3e-21
Identities = 38/189 (20%), Positives = 72/189 (38%), Gaps = 11/189 (5%)
Query: 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT-E 59
P + +++LA + G AGQ C A +L R V +++ + L S +
Sbjct: 267 PAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGD 326
Query: 60 QVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDMDASDRFISPTIL--------VDVK 111
+ ++S + + + + + GG + A R + PT + D
Sbjct: 327 PRDPTVDVGPLISPSAVDEMMAAIEDA--VEKGGRVLAGGRRLGPTYVQPTLVEAPADRV 384
Query: 112 PTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGS 171
+ E+F P+ + V+ +AI+ N RP L +F + + G+
Sbjct: 385 KDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGA 444
Query: 172 MCINDTVMH 180
+ IND H
Sbjct: 445 IYINDMPRH 453
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 57.0 bits (136), Expect = 1e-10
Identities = 19/164 (11%), Positives = 45/164 (27%), Gaps = 6/164 (3%)
Query: 23 INAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLKSL 82
+ + A +L + I A L + + +
Sbjct: 206 LISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEK 265
Query: 83 VHSSGTIALG------GDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFE 136
+ + G + V T+ E I+ I V++ E
Sbjct: 266 IAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYLDLIIAIKVVKNVDE 325
Query: 137 AIQFINARPKPLTLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180
AI+ I + + + N + F+ + + ++ +N +
Sbjct: 326 AIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRF 369
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 53.6 bits (127), Expect = 2e-09
Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 7/165 (4%)
Query: 16 RFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKH 75
+F+ + GQ C P + + Q + L + + +
Sbjct: 272 QFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQV 331
Query: 76 FQRLKSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAF 135
R + + P EEIFGP I+ E+
Sbjct: 332 VSRGS---DDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVA 388
Query: 136 EAIQFINARPKPLTLYLFSSNAQVQELF----IHQTHSGSMCIND 176
+ + LT + ++ ++ + +G + N
Sbjct: 389 DMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNG 433
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 181 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 99.96 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 99.91 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.4e-45 Score=308.12 Aligned_cols=180 Identities=19% Similarity=0.300 Sum_probs=171.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.+++.|+| ++.+++||++++.+++++
T Consensus 268 p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~ 347 (494)
T d1bxsa_ 268 PCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKI 347 (494)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred cEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 568999999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||.. ...|++++|||+.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 348 ~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t 427 (494)
T d1bxsa_ 348 LDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFT 427 (494)
T ss_dssp HHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEEC
T ss_pred HHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEe
Confidence 98886 69999999874 45789999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+|.+++.+++.++++|+|+||++..+
T Consensus 428 ~d~~~~~~~~~~l~~G~v~iN~~~~~ 453 (494)
T d1bxsa_ 428 NDIDKAITVSSALQSGTVWVNCYSVV 453 (494)
T ss_dssp SBHHHHHHHHHHSCCSEEEESCCCCC
T ss_pred CCHHHHHHHHHhCCEeEEEEcCCCCc
Confidence 99999999999999999999997653
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=6.3e-45 Score=304.04 Aligned_cols=180 Identities=19% Similarity=0.321 Sum_probs=170.7
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|++.+++++.+++.|+| ++.+++||++++.+++++
T Consensus 268 p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 347 (494)
T d1o04a_ 268 PNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 347 (494)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHH
T ss_pred cEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999998 568899999999999999
Q ss_pred HHHHh----cCceeeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEee
Q psy11681 80 KSLVH----SSGTIALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFS 154 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s 154 (181)
.++++ +|+++++||.. .+.|+|++|||+.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||
T Consensus 348 ~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s 427 (494)
T d1o04a_ 348 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFT 427 (494)
T ss_dssp HHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEEC
T ss_pred HHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEe
Confidence 98876 69999999875 45688999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 155 SNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 155 ~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+|.+++.+++.++++|+|+||++..+
T Consensus 428 ~d~~~~~~~~~~l~~G~v~iN~~~~~ 453 (494)
T d1o04a_ 428 KDLDKANYLSQALQAGTVWVNCYDVF 453 (494)
T ss_dssp SBHHHHHHHHHHCCSSEEEESCSSCC
T ss_pred CCHHHHHHHHHhCCeeEEEEcCCCCC
Confidence 99999999999999999999987653
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.4e-44 Score=303.32 Aligned_cols=179 Identities=23% Similarity=0.396 Sum_probs=167.3
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|++++++++++++.|+.++.+++||+++..+++++.
T Consensus 294 p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~ 373 (516)
T d1uzba_ 294 AIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVL 373 (516)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHH
T ss_pred ceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcccCCCcccCccccccCHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999767788999999999999999
Q ss_pred HHHh----cCceeeeCCc-cCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeC
Q psy11681 81 SLVH----SSGTIALGGD-MDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSS 155 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~-~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~ 155 (181)
++++ +|+.+ +||. .+..|+|+.||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++|||+
T Consensus 374 ~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~ 452 (516)
T d1uzba_ 374 SYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSR 452 (516)
T ss_dssp HHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred HHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcC
Confidence 9987 35544 5554 4567899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhhcceeeEEECCcccc
Q psy11681 156 NAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 156 d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
|.+++.++++++++|+|+||+++++
T Consensus 453 d~~~~~~~~~~l~~G~v~iN~~~~~ 477 (516)
T d1uzba_ 453 KREHLEWARREFHVGNLYFNRKITG 477 (516)
T ss_dssp CHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred CHHHHHHHHHhCCEeEEEEcCCCCC
Confidence 9999999999999999999998654
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.1e-43 Score=295.21 Aligned_cols=179 Identities=18% Similarity=0.316 Sum_probs=167.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++|+|+|+||.|++++++|||+++||+|+++|++...+++.|++ ++.+.+||+++..+.+++
T Consensus 252 p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~ 331 (474)
T d1wnda_ 252 PVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERV 331 (474)
T ss_dssp EEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHH
T ss_pred ceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchH
Confidence 6899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCce-eeeCCcc-CCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 80 KSLVH----SSGT-IALGGDM-DASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 80 ~~~~~----~ga~-~~~gg~~-~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
.++++ +|+. ++.|+.. ...|+++.||++.++++++.+++||+||||++|++|+|.+||++++|+++|||+++||
T Consensus 332 ~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~ 411 (474)
T d1wnda_ 332 GKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVW 411 (474)
T ss_dssp HHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEE
T ss_pred HHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEE
Confidence 99886 5775 5556554 3468899999999999999999999999999999999999999999999999999999
Q ss_pred eCcHHHHHHHHhhcceeeEEECCccc
Q psy11681 154 SSNAQVQELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 154 s~d~~~~~~~~~~~~~g~v~iN~~~~ 179 (181)
|+|.+++.+++.++++|+|+||++..
T Consensus 412 t~d~~~~~~~~~~l~~g~v~iN~~~~ 437 (474)
T d1wnda_ 412 TKDVGRAHRVSARLQYGCTWVNTHFM 437 (474)
T ss_dssp CSBHHHHHHHHHHCCSSEEEESCCCC
T ss_pred eCCHHHHHHHHHhCCccEEEEeCCCC
Confidence 99999999999999999999999765
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.2e-43 Score=296.79 Aligned_cols=180 Identities=20% Similarity=0.330 Sum_probs=170.5
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.++||.|++++|+|||++++|+|++++.+...+++.|+| ++.+++||++++.+++++
T Consensus 269 p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~ 348 (503)
T d1a4sa_ 269 PLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKV 348 (503)
T ss_dssp EEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHH
T ss_pred cEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999998 568999999999999999
Q ss_pred HHHHh----cCceeeeCCccC-------CCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCc
Q psy11681 80 KSLVH----SSGTIALGGDMD-------ASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPL 148 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~-------~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 148 (181)
.++++ +|+++++||... ..|+|++|||+.++++++++++||+||||++|++|+|.+||++++|.++|||
T Consensus 349 ~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL 428 (503)
T d1a4sa_ 349 LGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGL 428 (503)
T ss_dssp HHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCC
Confidence 99886 699999998632 3678999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 149 TLYLFSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 149 ~~~i~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+++|||+|..++.+++.++++|+|+||++..+
T Consensus 429 ~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~ 460 (503)
T d1a4sa_ 429 ASGVFTRDISRAHRVAANLEAGTCYINTYSIS 460 (503)
T ss_dssp EEEEECSBHHHHHHHHHHSCSSEEEESCCCCC
T ss_pred eEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCC
Confidence 99999999999999999999999999997653
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.7e-43 Score=289.38 Aligned_cols=178 Identities=50% Similarity=0.926 Sum_probs=166.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|++.++.+. |++ ++.+.+||++++.+.+++
T Consensus 214 p~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~-g~~~~~~~~~gp~i~~~~~~~~ 292 (446)
T d1ad3a_ 214 PCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFY-GEDAKQSRDYGRIINDRHFQRV 292 (446)
T ss_dssp EEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTSCCCSCHHHHHHH
T ss_pred cEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccccchhHHHHHhhhhhhheee-cccccccccccchhhhhhhhhh
Confidence 689999999999999999999999999999999999999999999999999998874 555 678999999999999999
Q ss_pred HHHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHH
Q psy11681 80 KSLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQV 159 (181)
Q Consensus 80 ~~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~ 159 (181)
.++++ .++...|+..+..+.++.|||+.++++++++++||+||||++|++|+|.+||++++|+++|||+++|||+|.++
T Consensus 293 ~~~~~-~a~~~~g~~~~~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~ 371 (446)
T d1ad3a_ 293 KGLID-NQKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKV 371 (446)
T ss_dssp HHTTT-TSCEEECCCEETTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHH
T ss_pred hcccc-chhcccceeecCCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHH
Confidence 88887 56666666666778899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCcccc
Q psy11681 160 QELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 160 ~~~~~~~~~~g~v~iN~~~~~ 180 (181)
+.+++.++++|+|+||+++++
T Consensus 372 a~~~~~~l~~G~v~iN~~~~~ 392 (446)
T d1ad3a_ 372 IKKMIAETSSGGVTANDVIVH 392 (446)
T ss_dssp HHHHHTTCCCSEEEESSSSGG
T ss_pred HHHHHHhCCEeEEEEeCCccC
Confidence 999999999999999987654
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.9e-42 Score=288.21 Aligned_cols=179 Identities=21% Similarity=0.348 Sum_probs=162.6
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCC-CCCccccccccHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQV-QGSKHYCRIVSDKHFQRL 79 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~ 79 (181)
|+||++|||++.|++.+++++|+++||.|++++++|||++++|+|+++|++++++++.|+| ++.+++||+++..+++++
T Consensus 267 p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~ 346 (499)
T d1ky8a_ 267 PAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEM 346 (499)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred eEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 468999999999999999
Q ss_pred HHHHh----cCceeeeCCccCCCCceeccEEE---ecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEE
Q psy11681 80 KSLVH----SSGTIALGGDMDASDRFISPTIL---VDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYL 152 (181)
Q Consensus 80 ~~~~~----~ga~~~~gg~~~~~~~~~~Pti~---~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 152 (181)
.++++ +|++++.||...... .+.++++ ....+++.+++||+||||++|++|+|.+||++++|.+++||+++|
T Consensus 347 ~~~i~~a~~~ga~v~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv 425 (499)
T d1ky8a_ 347 MAAIEDAVEKGGRVLAGGRRLGPT-YVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAV 425 (499)
T ss_dssp HHHHHHHHHTTCEEEECCCEEETT-EECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEE
T ss_pred HHHHHHHHHcCCEEeeeecccccc-ccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEE
Confidence 99875 699999998754333 3333333 234678999999999999999999999999999999999999999
Q ss_pred eeCcHHHHHHHHhhcceeeEEECCcccc
Q psy11681 153 FSSNAQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 153 ~s~d~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
||+|.+++.+++.++++|+|+||+++.+
T Consensus 426 ~s~d~~~~~~~~~~l~~G~v~iN~~~~~ 453 (499)
T d1ky8a_ 426 FGRDVVKIRRAVRLLEVGAIYINDMPRH 453 (499)
T ss_dssp ECCCHHHHHHHHHHCCSSEEEETSCCCC
T ss_pred EcCCHHHHHHHHHhCCEeEEEEeCCCCC
Confidence 9999999999999999999999998764
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=2.7e-38 Score=262.52 Aligned_cols=178 Identities=20% Similarity=0.293 Sum_probs=163.9
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.+++++|+++||.|+++++||||++++|+|++.++++...++.+++.+...++|.+.....+++.
T Consensus 255 ~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (474)
T d1euha_ 255 SAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVE 334 (474)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHH
T ss_pred eEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccccccccccchHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999887777899999999999988
Q ss_pred HHHh----cCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCc
Q psy11681 81 SLVH----SSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSN 156 (181)
Q Consensus 81 ~~~~----~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d 156 (181)
+... .++..+.++ ...+.++.||++..+++++++++||+||||++|++|+|++||++++|++++||+++|||+|
T Consensus 335 ~~~~~~~~~~~~~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d 412 (474)
T d1euha_ 335 GLINDANDKGATALTEI--KREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTND 412 (474)
T ss_dssp HHHHHHHHTTCEECSCC--CEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSC
T ss_pred HHHHhhhcccccccccC--CCCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCC
Confidence 8776 345544433 3368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCcccc
Q psy11681 157 AQVQELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 157 ~~~~~~~~~~~~~g~v~iN~~~~~ 180 (181)
.+++++++.++++|+|+||+++.+
T Consensus 413 ~~~~~~~~~~l~~g~v~iN~~~~~ 436 (474)
T d1euha_ 413 FPRAFGIAEQLEVGTVHINNKTQR 436 (474)
T ss_dssp HHHHHHHHHHSCSSEEEESSCCCC
T ss_pred HHHHHHHHHhCCEEEEEEECCCCC
Confidence 999999999999999999997643
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1.8e-33 Score=234.80 Aligned_cols=172 Identities=16% Similarity=0.224 Sum_probs=140.1
Q ss_pred CeEEeCCCCHHHHH--HHHHHHhchhcCCccccCCEEEEccccH-HHHHHHHHHHhhcccccCCCCCccccccccHHHHH
Q psy11681 1 PLYIDSSVNIELAV--RRFLWGKCINAGQTCIAPDYILCSRQVQ-AQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQ 77 (181)
Q Consensus 1 p~iV~~daDl~~aa--~~i~~~~~~~~Gq~C~a~~~v~v~~~~~-d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~ 77 (181)
|+||++|||++.|+ ..+++++|.|+||.|++++++||+++.+ +.|++.+++.+... ++.+.+||+++..+.+
T Consensus 255 p~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~gp~i~~~~~~ 329 (504)
T d1ez0a_ 255 PTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ-----SPSTLLTPGIRDSYQS 329 (504)
T ss_dssp EEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC-----CCBCCSSHHHHHHHHH
T ss_pred cccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhc-----ccccccccchhhhhhh
Confidence 68999999999885 4789999999999999999999988866 45777776655432 3467899999999998
Q ss_pred HHHHHHh-cCceeeeCCccCCCCceeccEEEe---cCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEe
Q psy11681 78 RLKSLVH-SSGTIALGGDMDASDRFISPTILV---DVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLF 153 (181)
Q Consensus 78 ~~~~~~~-~ga~~~~gg~~~~~~~~~~Pti~~---~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 153 (181)
++.+... .++++..||.. +.+..|.++. ++..++++++||+||||++|++|+|.+||++++|+++|||+++||
T Consensus 330 ~vi~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~ 406 (504)
T d1ez0a_ 330 QVVSRGSDDGIDVTFSQAE---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIH 406 (504)
T ss_dssp HHHHHHTSTTEEEEECCCC---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEE
T ss_pred hhhhhhhhhhhhccccccc---ccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEE
Confidence 8766554 57777777653 3344444443 334467899999999999999999999999999999999999999
Q ss_pred eC--cHHHHHHHHhhcc--eeeEEECCcccc
Q psy11681 154 SS--NAQVQELFIHQTH--SGSMCINDTVMH 180 (181)
Q Consensus 154 s~--d~~~~~~~~~~~~--~g~v~iN~~~~~ 180 (181)
|+ |..++.+++.+++ +|+|+||+++++
T Consensus 407 t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG 437 (504)
T d1ez0a_ 407 ATEEDYPQVSQLIPRLEEIAGRLVFNGWPTG 437 (504)
T ss_dssp CCGGGHHHHHHHHHHHHTTEEEEEESSCSSC
T ss_pred ecchhHHHHHHHHHHHhCCccEEEEcCCccc
Confidence 96 5578999999987 899999987653
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.96 E-value=2e-30 Score=211.68 Aligned_cols=142 Identities=18% Similarity=0.262 Sum_probs=116.4
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||++.|++.++.++|.+ ||.|++++|++||+++||+|+++|.+...+...+++. .+.. .
T Consensus 227 ~viv~~dAd~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~---------~~~~----~ 292 (414)
T d1o20a_ 227 HIFVDESADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRG---------CEKT----R 292 (414)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEE---------CHHH----H
T ss_pred CeecccccchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCcccc---------chhh----h
Confidence 478999999999999999998866 9999999999999999999999999888876443221 0000 0
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
.. .+.+... ....+++|+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 293 ~~--------------------~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a 349 (414)
T d1o20a_ 293 EI--------------------VPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNA 349 (414)
T ss_dssp HH--------------------STTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHH
T ss_pred hh--------------------cccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHH
Confidence 00 1111111 123467999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCccc
Q psy11681 161 ELFIHQTHSGSMCINDTVM 179 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~ 179 (181)
.+++.++++|+|+||+++.
T Consensus 350 ~~~~~~i~~G~V~IN~~~~ 368 (414)
T d1o20a_ 350 KKFVSEIDAAAVYVNASTR 368 (414)
T ss_dssp HHHHHHCCSSEEEESSCGG
T ss_pred HHHHHhCCeeEEEEeCCCc
Confidence 9999999999999998764
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=1.2e-24 Score=178.05 Aligned_cols=158 Identities=18% Similarity=0.143 Sum_probs=104.0
Q ss_pred CeEEeCCCCHHHHHHHHHHHhchhcCCccccCCEEEEccccHHHHHHHHHHHhhcccccCCCCCccccccccHHHHHHHH
Q psy11681 1 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQVQGSKHYCRIVSDKHFQRLK 80 (181)
Q Consensus 1 p~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~v~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 80 (181)
|+||++|||+++|++.++.++|.+.|| |++.++++||+++++.|...+....+.-. .+. ..+.......
T Consensus 232 ~~~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~gv--------~l~--~~~~~~~~~~ 300 (436)
T d1vlua_ 232 SIYLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEGGV--------TIH--ATKDLKTAYF 300 (436)
T ss_dssp EEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHCC--------CBE--ECHHHHHHHH
T ss_pred ceeecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhCCc--------EEE--eCHHHHHHhh
Confidence 689999999999999999999999987 88999999999999888655444333210 000 0111111111
Q ss_pred HHHhcCceeeeCCccCCCCceeccEEEecCCCCCCCcCcccccceeeeEEeCCHHHHHHHHhcCCCCceEEEeeCcHHHH
Q psy11681 81 SLVHSSGTIALGGDMDASDRFISPTILVDVKPTDPIMGEEIFGPILPIINVESAFEAIQFINARPKPLTLYLFSSNAQVQ 160 (181)
Q Consensus 81 ~~~~~ga~~~~gg~~~~~~~~~~Pti~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~s~d~~~~ 160 (181)
....+.++. ......|++..... .-+.+|.|+|+++|++|+|++|||+++|..++|||++|||+|...+
T Consensus 301 ~~~~~~~~~--------~~~~~~~~~~~~~~---~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a 369 (436)
T d1vlua_ 301 DKLNELGKL--------TEAIQCKTVDADEE---QDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANA 369 (436)
T ss_dssp HHHHHHTCC--------CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHH
T ss_pred hhhhhcccc--------cccccccccCCCcc---cchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHH
Confidence 111111100 11122233322212 2278999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCcccc
Q psy11681 161 ELFIHQTHSGSMCINDTVMH 180 (181)
Q Consensus 161 ~~~~~~~~~g~v~iN~~~~~ 180 (181)
.+|++++++|.|+||.++.+
T Consensus 370 ~~F~~~vda~~V~vNasTrf 389 (436)
T d1vlua_ 370 EKFMKGVDSSGVYWNASTRF 389 (436)
T ss_dssp HHHHHHCCCSEEEESSCGGG
T ss_pred HHHHHhCCceEEEEcCCCcc
Confidence 99999999999999998753
|