Psyllid ID: psy11790


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
MQTISTEAATGFKMALVSWAPNFIRDNVQVVLNELVEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYNAWIVSKDFKIYDL
cccccHHHHHccccEEEcccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccc
cccEEEHHHcccccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHEEEccc
MQTISTEAATGFKMALVSWAPNFIRDNVQVVLNELVEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHigpkymkdrkpmNIKYIILAYNLFQTVYNawivskdfkiydl
mqtisteaATGFKMALVSWAPNFIRDNVQVVLNELVEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYNAWIVSKDFKIYDL
MQTISTEAATGFKMALVSWAPNFIRDNVQVVLNELVEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYNAWIVSKDFKIYDL
********ATGFKMALVSWAPNFIRDNVQVVLNELVEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYNAWIVSKDFKIY**
*********TGFKMALVSWAPNFIRDNVQVVLNELVEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYNAWIVSKDFKIYDL
MQTISTEAATGFKMALVSWAPNFIRDNVQVVLNELVEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYNAWIVSKDFKIYDL
**TISTEAATGFKMALVSWAPNFIRDNVQVVLNELVEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYNAWIVSKDFKIYDL
oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooo
oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MQTISTEAATGFKMALVSWAPNFIRDNVQVVLNELVEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYNAWIVSKDFKIYDL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query110 2.2.26 [Sep-21-2011]
Q9GZR5 314 Elongation of very long c yes N/A 0.809 0.283 0.346 6e-06
Q3S8M4 314 Elongation of very long c yes N/A 0.809 0.283 0.346 8e-06
Q95K73 314 Elongation of very long c N/A N/A 0.809 0.283 0.346 8e-06
Q9EQC4 312 Elongation of very long c yes N/A 0.809 0.285 0.306 3e-05
D4ADY9 281 Elongation of very long c no N/A 0.563 0.220 0.375 0.0001
A1L3X0 281 Elongation of very long c no N/A 0.563 0.220 0.343 0.0004
Q1HRV8 358 Elongation of very long c N/A N/A 0.554 0.170 0.365 0.0005
A0JNC4 281 Elongation of very long c no N/A 0.472 0.185 0.407 0.0008
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1 Back     alignment and function desciption
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 12/101 (11%)

Query: 14  MALVSWAPNFIRDNVQVVLNELVE---------DKEVDKWFLISSNSSWLIIGTLVVYLA 64
           M L+   P  + + V   LN+ VE         DK V+ W L+ S    L I TL  YL 
Sbjct: 1   MGLLDSEPGSVLNVVSTALNDTVEFYRWTWSIADKRVENWPLMQSPWPTLSISTL--YLL 58

Query: 65  FVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYNAWIVSKDF 105
           FV  +GPK+MKDR+P  ++ +++ YN    + N +I  + F
Sbjct: 59  FVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELF 98




Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1 Back     alignment and function description
>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1 Back     alignment and function description
>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2 Back     alignment and function description
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1 Back     alignment and function description
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1 Back     alignment and function description
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2 Back     alignment and function description
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query110
328699191 240 PREDICTED: elongation of very long chain 0.681 0.312 0.519 1e-13
328722384 264 PREDICTED: elongation of very long chain 0.681 0.284 0.519 2e-13
194746321 325 GF18858 [Drosophila ananassae] gi|190628 0.563 0.190 0.515 2e-12
193596491 273 PREDICTED: elongation of very long chain 0.745 0.300 0.443 2e-12
328699135 282 PREDICTED: elongation of very long chain 0.609 0.237 0.521 1e-11
125773197 321 GA19958 [Drosophila pseudoobscura pseudo 0.563 0.193 0.484 3e-11
195158469 323 GL13809 [Drosophila persimilis] gi|19411 0.563 0.191 0.484 4e-11
239791051 278 ACYPI007931 [Acyrthosiphon pisum] 0.6 0.237 0.529 4e-11
193676359 278 PREDICTED: elongation of very long chain 0.6 0.237 0.529 4e-11
195454024 322 GK12817 [Drosophila willistoni] gi|19417 0.609 0.208 0.463 8e-11
>gi|328699191|ref|XP_003240858.1| PREDICTED: elongation of very long chain fatty acids protein 1-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 2/77 (2%)

Query: 29  QVVLNELVEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILA 88
           Q   NEL  D  +D W L+  NS W I   L +YL FVL +GPK MK+R+PMNIKY+IL 
Sbjct: 9   QQFYNELKSDSTIDSWPLV--NSPWPICIILALYLTFVLKLGPKLMKNREPMNIKYLILF 66

Query: 89  YNLFQTVYNAWIVSKDF 105
           YNL QT++N++I +  F
Sbjct: 67  YNLMQTMFNSYIFAYQF 83




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722384|ref|XP_003247564.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|194746321|ref|XP_001955629.1| GF18858 [Drosophila ananassae] gi|190628666|gb|EDV44190.1| GF18858 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|193596491|ref|XP_001942907.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328699135|ref|XP_003240836.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|125773197|ref|XP_001357857.1| GA19958 [Drosophila pseudoobscura pseudoobscura] gi|54637590|gb|EAL26992.1| GA19958 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195158469|ref|XP_002020108.1| GL13809 [Drosophila persimilis] gi|194116877|gb|EDW38920.1| GL13809 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|239791051|dbj|BAH72041.1| ACYPI007931 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|193676359|ref|XP_001952377.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|195454024|ref|XP_002074051.1| GK12817 [Drosophila willistoni] gi|194170136|gb|EDW85037.1| GK12817 [Drosophila willistoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query110
FB|FBgn0260942 322 bond "james bond" [Drosophila 0.554 0.189 0.523 8.6e-14
FB|FBgn0038986 295 CG5278 [Drosophila melanogaste 0.627 0.233 0.422 2.6e-10
FB|FBgn0037762 257 eloF "elongase F" [Drosophila 0.472 0.202 0.461 2.8e-09
UNIPROTKB|A5PKE6 314 ELOVL4 "ELOVL4 protein" [Bos t 0.763 0.267 0.354 6.6e-08
UNIPROTKB|J9PBB9 314 ELOVL4 "Uncharacterized protei 0.809 0.283 0.346 6.6e-08
FB|FBgn0038983 277 CG5326 [Drosophila melanogaste 0.563 0.223 0.4 8e-08
UNIPROTKB|Q9GZR5 314 ELOVL4 "Elongation of very lon 0.809 0.283 0.346 1.1e-07
UNIPROTKB|Q3S8M4 314 ELOVL4 "Elongation of very lon 0.809 0.283 0.346 1.4e-07
UNIPROTKB|Q95K73 314 ELOVL4 "Elongation of very lon 0.809 0.283 0.346 1.4e-07
FB|FBgn0034382 263 CG18609 [Drosophila melanogast 0.445 0.186 0.448 2.5e-07
FB|FBgn0260942 bond "james bond" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 182 (69.1 bits), Expect = 8.6e-14, P = 8.6e-14
 Identities = 33/63 (52%), Positives = 48/63 (76%)

Query:    38 DKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYN 97
             D+ VD WFL+SS     ++  ++VYLAFVL IGP+YMK+RKPM++K I++ YN FQ +Y+
Sbjct:    20 DETVDSWFLMSSPMP--VVAVVLVYLAFVLKIGPEYMKNRKPMDLKRIMVFYNAFQVLYS 77

Query:    98 AWI 100
              W+
Sbjct:    78 IWM 80




GO:0016021 "integral to membrane" evidence=IEA
GO:0000915 "cytokinesis, actomyosin contractile ring assembly" evidence=IMP
GO:0051225 "spindle assembly" evidence=IMP
GO:0007111 "cytokinesis after meiosis II" evidence=IMP
GO:0007110 "cytokinesis after meiosis I" evidence=IMP
GO:0007112 "male meiosis cytokinesis" evidence=IMP
GO:0000212 "meiotic spindle organization" evidence=IMP
FB|FBgn0038986 CG5278 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0037762 eloF "elongase F" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|A5PKE6 ELOVL4 "ELOVL4 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J9PBB9 ELOVL4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0038983 CG5326 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GZR5 ELOVL4 "Elongation of very long chain fatty acids protein 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q3S8M4 ELOVL4 "Elongation of very long chain fatty acids protein 4" [Macaca mulatta (taxid:9544)] Back     alignment and assigned GO terms
UNIPROTKB|Q95K73 ELOVL4 "Elongation of very long chain fatty acids protein 4" [Macaca fascicularis (taxid:9541)] Back     alignment and assigned GO terms
FB|FBgn0034382 CG18609 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query110
pfam01151 244 pfam01151, ELO, GNS1/SUR4 family 3e-12
>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family Back     alignment and domain information
 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 18/49 (36%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 53  WLIIGTLVVYLAFVLHIGPKYMKDRKPMNIKYIILAYNLFQTVYNAWIV 101
           W +I  +V+YL FV  +GPK M++RKP ++K +++ +NLF  + + +  
Sbjct: 7   WPVILIIVLYLVFV-FLGPKIMRNRKPFDLKRLLIVHNLFLVLLSLYGF 54


Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 110
PTZ00251 272 fatty acid elongase; Provisional 99.59
PF01151 250 ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr 99.5
KOG3071|consensus 274 99.39
KOG3072|consensus 282 99.25
>PTZ00251 fatty acid elongase; Provisional Back     alignment and domain information
Probab=99.59  E-value=1.1e-15  Score=120.96  Aligned_cols=66  Identities=26%  Similarity=0.426  Sum_probs=60.9

Q ss_pred             ccCccccccccccCCchhHHHHHHHHHHHhhhhccchhhcc----CCCcc-chhHHHHHHHHHHHHHHHHHHHHH
Q psy11790         36 VEDKEVDKWFLISSNSSWLIIGTLVVYLAFVLHIGPKYMKD----RKPMN-IKYIILAYNLFQTVYNAWIVSKDF  105 (110)
Q Consensus        36 ~~d~r~~~w~l~~s~~~~~~i~i~~~YL~~V~~~G~~~Mk~----RkP~~-Lk~~l~~yNl~~vv~S~~m~~~~~  105 (110)
                      .+.+|+++| ++++|++  ++.++++|+++| +.||++||+    |||++ ||+++.+||++|+++|++++++.+
T Consensus        12 f~~~~~~~w-l~~~~~~--~~~i~~~Yl~~V-~~Gp~~M~~~~~~Rkp~~~Lr~~l~~yNl~l~v~s~~~~~~~~   82 (272)
T PTZ00251         12 YDGHAVQKW-LASNVDI--CVYIAAAYLTFV-FKGPQLVDAIFHGNPPVPLIKKCWALWNIGLSVFSMYGVYRVV   82 (272)
T ss_pred             CCcHHHHHH-HHhCCHH--HHHHHHHHHHHH-HHHHHHHhhccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            457889999 6899999  999999999999 599999974    99999 999999999999999999998875



>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established Back     alignment and domain information
>KOG3071|consensus Back     alignment and domain information
>KOG3072|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00