Psyllid ID: psy11862

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG
Secondary Structure (PSIPRED)
cccHHHHccccEEEEEccccHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHccHHHHHHHHHcccccccEEEEEcccccccccccHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEc
Secondary Structure Prediction (SSPRO)
cccHHHHHcccEEEEEccccHHHHHHHHHHHHccccccEEEEEEEccccccHHHHHHHHHccHHHHHHHHHccHHHcEEEEEccccccccccccHHHHHHHHHHccEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEc
Coil and Loop (DISEMBL)
mgdvarwyAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRakrgltpkarlaefsklpvfeRLRKECPAQLSRLHIIEGDilqanlgikdsdllMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG
Flexible Loop (DISEMBL)
mgdvarwyagrsvlvtggtGFMGKVLLEKLLRSCPDIGKVYILCRakrgltpkarlaefsklpvferLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKEnvaantrgtqrLLDIALKMKKLVVSLDIG
Low Complexity Region (SEG)
MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG
Disordered region (IsUnstruct)
***VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVS****
Disordered Region (DISOPRED)
*GDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG
Disordered Region (DISEMBL)
MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG
Disordered Region (DISPRO)
*GDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
A1ZAI5	625	Putative fatty acyl-CoA r	yes	N/A	0.934	0.227	0.514	2e-34
Q5ZM72	515	Fatty acyl-CoA reductase	no	N/A	0.993	0.293	0.390	4e-27
Q7ZXF5	515	Fatty acyl-CoA reductase	N/A	N/A	0.993	0.293	0.397	2e-26
Q5R834	515	Fatty acyl-CoA reductase	yes	N/A	0.993	0.293	0.377	3e-26
Q922J9	515	Fatty acyl-CoA reductase	yes	N/A	0.993	0.293	0.370	5e-26
Q66H50	515	Fatty acyl-CoA reductase	yes	N/A	0.993	0.293	0.370	5e-26
Q8WVX9	515	Fatty acyl-CoA reductase	yes	N/A	0.993	0.293	0.370	8e-26
Q0P5J1	515	Fatty acyl-CoA reductase	no	N/A	0.953	0.281	0.379	2e-25
Q960W6	516	Putative fatty acyl-CoA r	no	N/A	0.934	0.275	0.405	2e-25
Q7TNT2	515	Fatty acyl-CoA reductase	no	N/A	0.953	0.281	0.365	9e-24

>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1

 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/142 (51%), Positives = 99/142 (69%)

Query: 4   VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
           +A++YAGRSV +TGGTGFMGKVL+EKLLRSCP+I  +Y+L R KRG    ARL E    P
Sbjct: 119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAP 178

Query: 64  VFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKE 123
           +FE LR+E P +LS++  I GDI    LGI + D  +L   VSVVF+ AA++K + +LK 
Sbjct: 179 LFESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKL 238

Query: 124 NVAANTRGTQRLLDIALKMKKL 145
           +V  N  GT+RL+++  +M  L
Sbjct: 239 SVTINMLGTKRLVELCHRMLSL 260

Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2

>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1

 Score =  120 bits (300), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/151 (39%), Positives = 95/151 (62%)

Query: 1   MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
           M  +  +Y G++VL+TG TGFMGKVLLEKLLRSCP +  VY+L R K G TP+AR+ E +
Sbjct: 1   MVSIPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEIT 60

Query: 61  KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
              +F+RLR+E P    ++ +I  ++ Q  L + +     L E ++++F+ AA+++    
Sbjct: 61  SCKLFDRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNET 120

Query: 121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
           L++ V  N   T++LL +A +M  L V + +
Sbjct: 121 LRDAVQLNVLSTKQLLSLAQQMTNLEVFMHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1

 Score =  117 bits (294), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/151 (39%), Positives = 92/151 (60%)

Query: 1   MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
           M  +  +Y G++VL+TG TGFMGKVLLEKLLRSCP+   VY+L R K G  P+ R+AE  
Sbjct: 1   MLSIPEFYQGKNVLITGATGFMGKVLLEKLLRSCPNTKAVYVLVRHKAGQKPRERVAEMM 60

Query: 61  KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
              +F++LR E P    ++  I  ++ Q  L +   D   L + + +VF+ AA+++    
Sbjct: 61  SCKLFDKLRDEQPDCAQKVIAISSELTQPELDMSKEDQDTLIDCIDIVFHCAATVRFNES 120

Query: 121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
           L++ +  N   T++LL +A KMKKL V + +
Sbjct: 121 LRDAMQLNVIATRQLLYLAQKMKKLEVFIHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1

 Score =  117 bits (293), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/151 (37%), Positives = 93/151 (61%)

Query: 1   MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
           M  +  +Y G++VL+TG TGF+GKVLLEKLLRSCP +  VY+L R K G TP+ R+ E  
Sbjct: 1   MVSIPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVL 60

Query: 61  KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
              +F+RLR E P    ++  I  ++ Q  L + + D  ++ E  +++F+ AA+++    
Sbjct: 61  SGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIESTNIIFHCAATVRFNEN 120

Query: 121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
           L++ V  N   T++L+ +A +MK L V + +
Sbjct: 121 LRDAVQLNVIATRQLILLAQQMKNLEVFMHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1

 Score =  116 bits (291), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/151 (37%), Positives = 93/151 (61%)

Query: 1   MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
           M  +  +Y G+++L+TG TGF+GKVLLEKLLRSCP +  VY+L R K G TP+ R+ E  
Sbjct: 1   MVSIPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEIL 60

Query: 61  KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
              +F+RLR E P    ++  I  ++ Q  L + + D  ++ +  +V+F+ AA+++    
Sbjct: 61  SSKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNEN 120

Query: 121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
           L++ V  N   T++L+ +A +MK L V + +
Sbjct: 121 LRDAVQLNVIATRQLILLAQQMKNLEVFMHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1

 Score =  116 bits (290), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/151 (37%), Positives = 93/151 (61%)

Query: 1   MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
           M  +  +Y G+++L+TG TGF+GKVLLEKLLRSCP +  VY+L R K G TP+ R+ E  
Sbjct: 1   MVSIPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEIL 60

Query: 61  KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
              +F+RLR E P    ++  I  ++ Q  L + + D  ++ +  +V+F+ AA+++    
Sbjct: 61  SGKLFDRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNEN 120

Query: 121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
           L++ V  N   T++L+ +A +MK L V + +
Sbjct: 121 LRDAVQLNVIATRQLILLAQQMKNLEVFMHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1

 Score =  115 bits (289), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/151 (37%), Positives = 93/151 (61%)

Query: 1   MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
           M  +  +Y G++VL+TG TGF+GKVLLEKLLRSCP +  VY+L R K G TP+ R+ E  
Sbjct: 1   MVSIPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVL 60

Query: 61  KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
              +F+RLR E P    ++  I  ++ Q  L + + D  ++ +  +++F+ AA+++    
Sbjct: 61  SGKLFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNEN 120

Query: 121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
           L++ V  N   T++L+ +A +MK L V + +
Sbjct: 121 LRDAVQLNVIATRQLILLAQQMKNLEVFMHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 89/145 (61%)

Query: 1   MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
           M  +A +Y G+S+L+TG TGFMGKVL+EKL R+ PD+  VYIL R K+G T + R+ +  
Sbjct: 1   MSMIAAFYGGKSILITGATGFMGKVLMEKLFRTSPDLKVVYILVRPKQGQTLQQRVFQIL 60

Query: 61  KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
              +FE++++ CP    ++  I  D+ Q +  I   D+  L    +++F+ AA+++ +  
Sbjct: 61  DSKLFEKVKEVCPNVHEKIRAISADLNQNDFAISKEDMKELLSHTNIIFHCAATVRFDDH 120

Query: 121 LKENVAANTRGTQRLLDIALKMKKL 145
           L+  V  N   TQ+LL +A +M KL
Sbjct: 121 LRHAVQLNVTATQQLLLMASQMPKL 145

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q960W6|FACR3_DROME Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster GN=CG8306 PE=2 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 94/143 (65%), Gaps = 1/143 (0%)

Query: 4   VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
           +  +YAGR+V +TG TGF+G  ++EKLLR  P++G +Y+L RAK+G + + RL E  K  
Sbjct: 6   ITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNS 65

Query: 64  VFERLRK-ECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELK 122
           VF++ ++ +  ++LS++  IEGD+   +LGI   D   L + V+VVF+ AA+L     LK
Sbjct: 66  VFDKFKELQLQSRLSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLK 125

Query: 123 ENVAANTRGTQRLLDIALKMKKL 145
           E    N RGT+R++++  ++K L
Sbjct: 126 ETTNINLRGTRRVVELCQQIKNL 148

Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1

 Score =  108 bits (271), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 89/145 (61%)

Query: 1   MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
           M  +A +Y+ +S+L+TG TGF+GKVL+EKL R+ P +  +YIL R K G T + R+ +  
Sbjct: 1   MSMIAAFYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQIL 60

Query: 61  KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
              +FE++++ CP    ++  I  D+ Q +  I   D+  L    +++F+ AA+++ +A 
Sbjct: 61  NSKLFEKVKEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAH 120

Query: 121 LKENVAANTRGTQRLLDIALKMKKL 145
           L+E V  N   TQ+LL +A +M KL
Sbjct: 121 LREAVQLNVTATQQLLLMASQMPKL 145

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
389610823	518	simila to CG30427 [Papilio polytes]	0.947	0.277	0.534	9e-37
300116407	466	uncharacterized protein LOC412986 [Apis	0.953	0.311	0.489	5e-36
170048456	239	conserved hypothetical protein [Culex qu	0.980	0.623	0.496	8e-36
157104440	502	hypothetical protein AaeL_AAEL014302 [Ae	0.980	0.296	0.503	5e-35
383855698	519	PREDICTED: putative fatty acyl-CoA reduc	0.960	0.281	0.465	4e-34
357609460	517	hypothetical protein KGM_08231 [Danaus p	0.940	0.276	0.517	5e-34
193636566	517	PREDICTED: putative fatty acyl-CoA reduc	0.934	0.274	0.521	8e-34
195380521	660	GJ20993 [Drosophila virilis] gi|19414381	0.934	0.215	0.521	1e-33
347970222	507	AGAP003611-PA [Anopheles gambiae str. PE	0.934	0.280	0.492	1e-33
357631079	621	hypothetical protein KGM_02945 [Danaus p	0.934	0.228	0.5	1e-33

>gi|389610823|dbj|BAM19022.1| simila to CG30427 [Papilio polytes]

 Score =  158 bits (399), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 77/144 (53%), Positives = 103/144 (71%)

Query: 3   DVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKL 62
           +V  WY GR VLVTG +G MGKVL+EK+L S PDIG VY L R+KRG TP++R+ +  KL
Sbjct: 4   EVNEWYRGRHVLVTGASGLMGKVLIEKMLYSVPDIGCVYALVRSKRGKTPESRIEDMWKL 63

Query: 63  PVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELK 122
           P+F R+R+E P  + +L  + GDI+  NLG+    L  +  EVSVVF+ AASL+LEA LK
Sbjct: 64  PLFSRIREEKPHMMKKLVPVSGDIMYDNLGVDPKVLEQIYNEVSVVFHFAASLRLEAPLK 123

Query: 123 ENVAANTRGTQRLLDIALKMKKLV 146
           E +  NT+GT R+LD+A ++K LV
Sbjct: 124 EGLEMNTKGTMRVLDVAKRIKNLV 147

Source: Papilio polytes

Species: Papilio polytes

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|300116407|ref|NP_001177850.1| uncharacterized protein LOC412986 [Apis mellifera] gi|298569763|gb|ADI87410.1| putative fatty acyl-CoA reductase [Apis mellifera]

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 71/145 (48%), Positives = 105/145 (72%)

Query: 1   MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
           + ++  +Y G+++ VTGGTG MGKVL+EKLL SC DI K+Y+L R KRG TP+ R+ E  
Sbjct: 4   LTEIQSFYKGKNIFVTGGTGLMGKVLIEKLLYSCTDINKIYVLIRPKRGRTPETRMDEML 63

Query: 61  KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
           KLP+F+R+RK+ P  + ++  + GD+   NLG+      ML +E+ +VF+ AA+LKLEA+
Sbjct: 64  KLPMFQRIRKQKPQMMKKIVTLNGDVSGENLGLTKEQSEMLMDEIDIVFHFAATLKLEAK 123

Query: 121 LKENVAANTRGTQRLLDIALKMKKL 145
           LK+ +  NT GT+R+L++A KMKKL
Sbjct: 124 LKDAIEMNTVGTKRVLELAKKMKKL 148

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170048456|ref|XP_001852935.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167870577|gb|EDS33960.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  155 bits (391), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 74/149 (49%), Positives = 106/149 (71%)

Query: 4   VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
           + +WY+G+S+ VTGG+GFMGKVLLEK+L +C D+  +YIL R KRG TP+ R+ E+ KLP
Sbjct: 6   IQKWYSGKSIFVTGGSGFMGKVLLEKILFACSDVRVIYILIRPKRGKTPQTRIEEWFKLP 65

Query: 64  VFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKE 123
           VF+R+R + P    +L  I+GD+    LGI + DL  L  E  +VF+ AA+LKLEA+LK+
Sbjct: 66  VFQRIRDQKPEVFKKLVPIQGDVTFDGLGISNEDLSKLINETEIVFHCAATLKLEAKLKD 125

Query: 124 NVAANTRGTQRLLDIALKMKKLVVSLDIG 152
            +  NT GT+R+LD+  +M+KL V L + 
Sbjct: 126 AIEMNTVGTKRMLDLCKQMEKLQVLLHLS 154

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157104440|ref|XP_001648409.1| hypothetical protein AaeL_AAEL014302 [Aedes aegypti] gi|108869199|gb|EAT33424.1| AAEL014302-PA [Aedes aegypti]

 Score =  152 bits (383), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/149 (50%), Positives = 104/149 (69%)

Query: 4   VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
           V +WYAG+++ VTGG+GFMGKVLLEKLL +C +I  +Y+L R KRG  P+ARL E+ KLP
Sbjct: 6   VQKWYAGKTIFVTGGSGFMGKVLLEKLLYACSEIRTIYVLIRPKRGKVPQARLDEWFKLP 65

Query: 64  VFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKE 123
           +F+R++ + P    +L  I+GDI    LGI   D+  L  E  +VF+ AA+LKLEA LK+
Sbjct: 66  LFQRIKNQKPEVFKKLVPIQGDITFDGLGISKDDVDRLANEAEIVFHCAATLKLEANLKD 125

Query: 124 NVAANTRGTQRLLDIALKMKKLVVSLDIG 152
            +  NT GT+R+LD+  +MKKL V L + 
Sbjct: 126 AIEMNTVGTKRVLDLCKQMKKLQVLLHLS 154

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855698|ref|XP_003703347.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Megachile rotundata]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 104/146 (71%)

Query: 1   MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
           + ++  +Y G+++ +TGGTG MGKVL+EKLL SC ++ K+YIL RAKRG +P+AR+ E  
Sbjct: 4   LSEIQSFYVGKTIFITGGTGLMGKVLIEKLLYSCSNLKKIYILARAKRGRSPEARVNEMF 63

Query: 61  KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
           KLP+F+R++K+ P  L ++  + GD+   NLG+ D  L ML  E  +VF+ AA+L+LE+ 
Sbjct: 64  KLPLFQRIQKQKPEMLKKVIALNGDVTSDNLGLNDEQLEMLINETDIVFHCAATLRLESN 123

Query: 121 LKENVAANTRGTQRLLDIALKMKKLV 146
           LK+ +  NT GT+R+L++  KMK L 
Sbjct: 124 LKDAIEMNTVGTKRMLELGKKMKNLT 149

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357609460|gb|EHJ66463.1| hypothetical protein KGM_08231 [Danaus plexippus]

 Score =  149 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 74/143 (51%), Positives = 99/143 (69%)

Query: 3   DVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKL 62
           +V  WY GR V VTG  G MGKVL+EKLL S PDIG VY L R+KRG +P+ R+ E  +L
Sbjct: 4   EVNEWYKGRKVFVTGALGLMGKVLIEKLLYSVPDIGCVYALVRSKRGKSPETRIEEMWQL 63

Query: 63  PVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELK 122
           P+F R+R+E P  + +L  + GDI   +LGI +     +  EVSVVF+ AA+L+LEA LK
Sbjct: 64  PLFARIREEKPHVMKKLIAVAGDIQYDDLGINNKQTEEIYNEVSVVFHFAATLRLEAPLK 123

Query: 123 ENVAANTRGTQRLLDIALKMKKL 145
           E +  NT+GT R+L++A KM+KL
Sbjct: 124 EGLELNTKGTLRVLEMAKKMRKL 146

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193636566|ref|XP_001948821.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like isoform 1 [Acyrthosiphon pisum] gi|328724644|ref|XP_003248209.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like isoform 2 [Acyrthosiphon pisum]

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 74/142 (52%), Positives = 103/142 (72%)

Query: 4   VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
           V  WY GRSV +TGGTG+MGKVL+EKLLR C  I  +Y+LCR K+G +P AR+ +  KL 
Sbjct: 6   VCEWYTGRSVFITGGTGYMGKVLIEKLLRDCGGIKTIYVLCRPKKGFSPTARIEQIRKLA 65

Query: 64  VFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKE 123
           VFER+R E P +L ++  +EGD+    LG+   +  +L +EVS+VFNGAASL+LE+ LK+
Sbjct: 66  VFERVRTEFPDRLKKIKAMEGDLGLPGLGLSSENKSILVDEVSIVFNGAASLRLESGLKD 125

Query: 124 NVAANTRGTQRLLDIALKMKKL 145
            +  NT GT+ +LD+A++MK L
Sbjct: 126 AIRQNTTGTKHVLDLAVEMKNL 147

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195380521|ref|XP_002049019.1| GJ20993 [Drosophila virilis] gi|194143816|gb|EDW60212.1| GJ20993 [Drosophila virilis]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/142 (52%), Positives = 99/142 (69%)

Query: 4   VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
           + ++YAGRSV +TGGTGFMGKVL+EKLLRSCPDI  +Y+L R KRG    ARL E    P
Sbjct: 154 IGQFYAGRSVFITGGTGFMGKVLVEKLLRSCPDIRNIYLLIRPKRGQEVSARLTELLNAP 213

Query: 64  VFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKE 123
           +FE LR+E P +LS++  I GDI    LGI +SD  +L   VSVVF+ AA++K + +LK 
Sbjct: 214 LFESLRREKPKELSKVIPISGDITSEELGISESDQTLLCRNVSVVFHSAATVKFDEKLKL 273

Query: 124 NVAANTRGTQRLLDIALKMKKL 145
           +V  N  GT+RL+++  +M  L
Sbjct: 274 SVTINMLGTKRLVELCHRMMSL 295

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970222|ref|XP_313370.5| AGAP003611-PA [Anopheles gambiae str. PEST] gi|333468831|gb|EAA08761.5| AGAP003611-PA [Anopheles gambiae str. PEST]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/142 (49%), Positives = 100/142 (70%)

Query: 4   VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
           V  WY G+++ VTGG+GFMGKVLLEKLL SC D+ ++Y+L R KRG +P+ R+ ++ KLP
Sbjct: 10  VQTWYTGKTIFVTGGSGFMGKVLLEKLLYSCSDLERIYVLMRPKRGKSPQTRIEDWLKLP 69

Query: 64  VFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKE 123
           VF+R+R+E P    +L  I GD+    LGI      +L +   +VF+ AA+LKLEA LK+
Sbjct: 70  VFKRIREEKPEVYKKLVPIPGDVTSDKLGISPEHEQLLIDTAEIVFHCAATLKLEARLKD 129

Query: 124 NVAANTRGTQRLLDIALKMKKL 145
            +  NT GT+R+LD+ L+MK+L
Sbjct: 130 AIEMNTIGTKRILDLCLQMKRL 151

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357631079|gb|EHJ78784.1| hypothetical protein KGM_02945 [Danaus plexippus]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 101/142 (71%)

Query: 4   VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
           +  +Y  ++VLVTGGTGFMGKVL+EKLL S PDIG +Y+L R K+G +   R  +  +LP
Sbjct: 109 IREFYKSKNVLVTGGTGFMGKVLIEKLLFSVPDIGNIYVLMRPKKGKSVNQRYEDMQRLP 168

Query: 64  VFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKE 123
           +F+RLR   P+ L ++  + GD+L  + G+ +SD+  + E+VS+VF+ AA+LKLEA L E
Sbjct: 169 IFDRLRNTKPSSLKKIVPLTGDVLFDDFGLSESDMQKISEDVSIVFHFAATLKLEAPLYE 228

Query: 124 NVAANTRGTQRLLDIALKMKKL 145
           NV  NT GTQR L++A K+K L
Sbjct: 229 NVNMNTCGTQRALNVAKKLKNL 250

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
FB|FBgn0034145	625	CG5065 [Drosophila melanogaste	0.934	0.227	0.514	2.8e-32
FB|FBgn0043792	506	CG30427 [Drosophila melanogast	0.953	0.286	0.434	4e-29
ZFIN|ZDB-GENE-060503-367	515	si:dkey-97m3.1 "si:dkey-97m3.1	0.993	0.293	0.403	8.1e-28
UNIPROTKB|E1C6H7	511	FAR2 "Uncharacterized protein"	0.993	0.295	0.430	3.7e-27
FB|FBgn0039131	531	CG12268 [Drosophila melanogast	0.940	0.269	0.398	4.5e-27
WB|WBGene00022200	536	fard-1 [Caenorhabditis elegans	0.947	0.268	0.395	4.6e-26
ZFIN|ZDB-GENE-040426-2908	464	far1 "fatty acyl CoA reductase	0.993	0.325	0.397	7.8e-26
FB|FBgn0033464	517	CG1441 [Drosophila melanogaste	0.934	0.274	0.402	1.4e-25
UNIPROTKB|Q5ZM72	515	FAR1 "Fatty acyl-CoA reductase	0.993	0.293	0.390	5e-25
UNIPROTKB|E1C023	517	FAR1 "Fatty acyl-CoA reductase	0.993	0.292	0.390	5.1e-25

FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)]

 Score = 359 (131.4 bits), Expect = 2.8e-32, P = 2.8e-32
 Identities = 73/142 (51%), Positives = 99/142 (69%)

Query:     4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
             +A++YAGRSV +TGGTGFMGKVL+EKLLRSCP+I  +Y+L R KRG    ARL E    P
Sbjct:   119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAP 178

Query:    64 VFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKE 123
             +FE LR+E P +LS++  I GDI    LGI + D  +L   VSVVF+ AA++K + +LK 
Sbjct:   179 LFESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKL 238

Query:   124 NVAANTRGTQRLLDIALKMKKL 145
             +V  N  GT+RL+++  +M  L
Sbjct:   239 SVTINMLGTKRLVELCHRMLSL 260

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0043792 CG30427 [Drosophila melanogaster (taxid:7227)]

 Score = 326 (119.8 bits), Expect = 4.0e-29, P = 4.0e-29
 Identities = 63/145 (43%), Positives = 95/145 (65%)

Query:     1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
             +  V  +Y  +++ +TG +GFMGKVLLEKLL SC  + +V I+CR KRG  P+ RL E  
Sbjct:     5 LSPVQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMF 64

Query:    61 KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
             KLP+F+R++ E P  L R+ I +GD+    LG+    L  + E  ++VF+ AA+LKLE  
Sbjct:    65 KLPIFQRIKDERPEMLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGN 124

Query:   121 LKENVAANTRGTQRLLDIALKMKKL 145
             L++ +  N  GT+R L++A +MK+L
Sbjct:   125 LRDAIDMNLLGTRRALNVAKEMKQL 149

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

ZFIN|ZDB-GENE-060503-367 si:dkey-97m3.1 "si:dkey-97m3.1" [Danio rerio (taxid:7955)]

 Score = 315 (115.9 bits), Expect = 8.1e-28, P = 8.1e-28
 Identities = 61/151 (40%), Positives = 96/151 (63%)

Query:     1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
             MG ++ WYAG++VL+TG TGFMGKVL+EKLLRSCPD+  +YIL R K G +   R+ +  
Sbjct:     1 MGSISEWYAGKNVLITGATGFMGKVLVEKLLRSCPDVNALYILVRPKAGQSMSERVQDMM 60

Query:    61 KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
             K  +F+R+R++ P    ++  I  +++Q  L I   D+  L   V +VF+ AA+++ +  
Sbjct:    61 KCKLFDRVREDNPEFHQKIIAISSELMQPGLAISAQDVETLTSRVHIVFHCAATIRFDEP 120

Query:   121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
             LK  +  N   TQ+LL +A +M++L   + I
Sbjct:   121 LKHALQLNVMATQQLLSLAQQMQQLQAFIHI 151

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

UNIPROTKB|E1C6H7 FAR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 309 (113.8 bits), Expect = 3.7e-27, P = 3.7e-27
 Identities = 65/151 (43%), Positives = 96/151 (63%)

Query:     1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
             M  V+ +Y G++VL+TG TGFMGKVL+EKLLRS PD+  VYIL R K G + + R+A   
Sbjct:     1 MSSVSAYYNGKTVLITGATGFMGKVLVEKLLRSSPDVKAVYILVRPKAGQSMQERVANML 60

Query:    61 KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
             K  VF+R+R++CP    ++  I  ++ Q  L I   D   L   V++VF+ AA+++ +  
Sbjct:    61 KCKVFDRVREDCPNFHEKIKPINAELTQPKLAISAEDEEELLTRVNIVFHCAATVRFDEP 120

Query:   121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
             LK  +  N  GTQRLL++A +M+KL   + I
Sbjct:   121 LKHALQLNAMGTQRLLELAQQMQKLEAFIHI 151

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

FB|FBgn0039131 CG12268 [Drosophila melanogaster (taxid:7227)]

 Score = 309 (113.8 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 57/143 (39%), Positives = 97/143 (67%)

Query:     3 DVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKL 62
             D+A++YA +++L+TG TGFMGKVL+EKLLRSC D+  +Y+L R K+G+ P  R  ++ K 
Sbjct:    14 DIAKFYANKTILITGATGFMGKVLVEKLLRSCADLNVIYLLIRTKKGVDPSVRKEQYFKC 73

Query:    63 PVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELK 122
              +F +L ++ P  + ++ +++GD+L+ +LG+  +D   L   V VVF+ AA+++ +  L+
Sbjct:    74 VIFGKLLEKNPGIVDKVRVVKGDLLEPDLGLSANDTNTLASNVEVVFHCAANVRFDQPLR 133

Query:   123 ENVAANTRGTQRLLDIALKMKKL 145
               V  N  GT ++L +A KM +L
Sbjct:   134 PMVMMNVVGTLKVLRLAEKMSQL 156

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

WB|WBGene00022200 fard-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 300 (110.7 bits), Expect = 4.6e-26, P = 4.6e-26
 Identities = 57/144 (39%), Positives = 96/144 (66%)

Query:     8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFER 67
             YAG SVL+TGGTGF+GKV++EKLL +  DI  +Y++ R ++G  P+ RL+     P+F R
Sbjct:     9 YAGSSVLLTGGTGFLGKVIVEKLLWTIDDIQNIYLMIRTRKGKNPQERLSGLLHDPLFNR 68

Query:    68 LRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAA 127
             +R+E P    +L  I GD++  NLG+   D++++++ V+VV + AA++K +  L+  V  
Sbjct:    69 IRQEKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLRAAVTM 128

Query:   128 NTRGTQRLLDIALKMKKLVVSLDI 151
             N  GT+R++D+  ++K L V + +
Sbjct:   129 NVIGTKRIIDLCHQIKDLKVLVHV 152

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

ZFIN|ZDB-GENE-040426-2908 far1 "fatty acyl CoA reductase 1" [Danio rerio (taxid:7955)]

 Score = 295 (108.9 bits), Expect = 7.8e-26, P = 7.8e-26
 Identities = 60/151 (39%), Positives = 92/151 (60%)

Query:     1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
             M  +  +Y G++VL+TG TGFMGKVLLEKLLRSCP +   Y+L R K G  P AR+A+  
Sbjct:     1 MVTIPEYYVGKNVLITGATGFMGKVLLEKLLRSCPGVKAAYVLVRPKAGQAPDARIADMI 60

Query:    61 KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
                +F+RLR++ P    ++  I  D+ Q NL +   D   L   ++VVF+ AA+++    
Sbjct:    61 NCKLFDRLREDQPDFAGKIVAINSDLTQPNLDLSAEDQETLTGCINVVFHCAATIRFNEP 120

Query:   121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
             LK+ +  N   TQ+++ +A +MK L V + +
Sbjct:   121 LKDAMQLNVLATQKMVSLAHRMKHLEVFIHV 151

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

FB|FBgn0033464 CG1441 [Drosophila melanogaster (taxid:7227)]

 Score = 295 (108.9 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 58/144 (40%), Positives = 99/144 (68%)

Query:     4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
             +A  + GRS+ +TGGTGF+GKVL+EKLLRSC  + ++Y+L R K+G  P+ R+ +  +  
Sbjct:    28 IAECFKGRSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIKDIFQNV 87

Query:    64 VFERLRKECPAQ--LSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAEL 121
             +F+++++    +  L ++  I GD+L   LGI + DL  L++EVS+V++ AA+++ +  L
Sbjct:    88 LFDQVKQMRGEEHILQQVVAIAGDVLSPGLGISEKDLETLRQEVSIVYHCAATVRFDEPL 147

Query:   122 KENVAANTRGTQRLLDIALKMKKL 145
             +  V  NTRGT+ +L++AL +K L
Sbjct:   148 RNAVFMNTRGTKYMLELALTLKHL 171

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q5ZM72 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)]

 Score = 290 (107.1 bits), Expect = 5.0e-25, P = 5.0e-25
 Identities = 59/151 (39%), Positives = 95/151 (62%)

Query:     1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
             M  +  +Y G++VL+TG TGFMGKVLLEKLLRSCP +  VY+L R K G TP+AR+ E +
Sbjct:     1 MVSIPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEIT 60

Query:    61 KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
                +F+RLR+E P    ++ +I  ++ Q  L + +     L E ++++F+ AA+++    
Sbjct:    61 SCKLFDRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNET 120

Query:   121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
             L++ V  N   T++LL +A +M  L V + +
Sbjct:   121 LRDAVQLNVLSTKQLLSLAQQMTNLEVFMHV 151

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

UNIPROTKB|E1C023 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)]

 Score = 290 (107.1 bits), Expect = 5.1e-25, P = 5.1e-25
 Identities = 59/151 (39%), Positives = 95/151 (62%)

Query:     1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS 60
             M  +  +Y G++VL+TG TGFMGKVLLEKLLRSCP +  VY+L R K G TP+AR+ E +
Sbjct:     1 MVSIPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEIT 60

Query:    61 KLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAE 120
                +F+RLR+E P    ++ +I  ++ Q  L + +     L E ++++F+ AA+++    
Sbjct:    61 SCKLFDRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNET 120

Query:   121 LKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
             L++ V  N   T++LL +A +M  L V + +
Sbjct:   121 LRDAVQLNVLSTKQLLSLAQQMTNLEVFMHV 151

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A1ZAI5	FACR1_DROME	1, ., 2, ., 1, ., n, 2	0.5140	0.9342	0.2272	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	152
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	7e-54
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	4e-43
PLN02503	605	PLN02503, PLN02503, fatty acyl-CoA reductase 2	6e-23
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-20
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	1e-19
PLN02996	491	PLN02996, PLN02996, fatty acyl-CoA reductase	8e-17
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-14
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	2e-13
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	6e-12
TIGR03443	1389	TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh	7e-11
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	8e-08
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	4e-07
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	6e-07
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-06
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	7e-06
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	1e-05
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	5e-05
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	6e-05
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-04
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	4e-04
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	7e-04
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	0.001
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	0.001
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	0.001
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	0.002
cd08946	200	cd08946, SDR_e, extended (e) SDRs	0.003

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score =  172 bits (437), Expect = 7e-54
 Identities = 67/137 (48%), Positives = 93/137 (67%)

Query: 11  RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRK 70
           +SVL+TG TGF+GKVLLEKLLRSCPDIGK+Y+L R K G + + RL E  K  +F+R R 
Sbjct: 1   KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60

Query: 71  ECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTR 130
             P   S++  IEGD+ + NLG+ D DL  L EEV+++ + AA++  +  L E ++ N  
Sbjct: 61  LNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDERLDEALSINVL 120

Query: 131 GTQRLLDIALKMKKLVV 147
           GT RLL++A + KKL  
Sbjct: 121 GTLRLLELAKRCKKLKA 137

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score =  142 bits (360), Expect = 4e-43
 Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 7/134 (5%)

Query: 15  VTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLRKECP 73
           +TG TGF+GKVLLEKLLRS P++ K+Y L RAK G +   RL  E  K  +F+RL+    
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEV-KIYCLVRAKDGESALERLRQELLKYGLFDRLK---- 55

Query: 74  AQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQ 133
             L R+  + GD+ + NLG+ D D   L EEV V+ + AA++       +  A N  GT+
Sbjct: 56  -ALERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTR 114

Query: 134 RLLDIALKMKKLVV 147
            +L +A +MKKL  
Sbjct: 115 EVLRLAKQMKKLPF 128

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2

 Score = 93.4 bits (232), Expect = 6e-23
 Identities = 52/154 (33%), Positives = 86/154 (55%), Gaps = 6/154 (3%)

Query: 4   VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLA-EFSKL 62
           +A +  G++ L+TG TGF+ KVL+EK+LR+ PD+GK+Y+L +AK       RL  E    
Sbjct: 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDA 172

Query: 63  PVFERLRKECPAQ-----LSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL 117
            +F+ L++          LS+L  + G++ ++NLG++      + +EV V+ N AA+   
Sbjct: 173 ELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF 232

Query: 118 EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI 151
           +      +  NTRG   L+  A K KKL + L +
Sbjct: 233 DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQV 266

Length = 605

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 84.3 bits (209), Expect = 2e-20
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 16/127 (12%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           V VTGGTGF+G+ L+++LL    +  KV +L R++       R+ E              
Sbjct: 1   VFVTGGTGFLGRHLVKRLL---ENGFKVLVLVRSESLGEAHERIEEAGLEA--------- 48

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGT 132
                R+ ++EGD+ Q NLG+  +    L  +V  V + AAS   +A  ++    N  GT
Sbjct: 49  ----DRVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGT 104

Query: 133 QRLLDIA 139
           + +L++A
Sbjct: 105 EHVLELA 111

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 81.9 bits (203), Expect = 1e-19
 Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 10/140 (7%)

Query: 12  SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71
           +VL+TG TGF+G  LL +LL+   ++ K+Y L RAK       RL +  K      L  E
Sbjct: 1   TVLLTGATGFLGAYLLRELLK-RKNVSKIYCLVRAKDEEAALERLIDNLKE-YGLNLWDE 58

Query: 72  CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAAN 128
              +LSR+ ++ GD+ + NLG+ D D   L EEV V+ +  A++       ELK    AN
Sbjct: 59  --LELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEELK---PAN 113

Query: 129 TRGTQRLLDIALKMKKLVVS 148
             GT+ LL +A   K   + 
Sbjct: 114 VLGTKELLKLAATGKLKPLH 133

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase

 Score = 75.9 bits (187), Expect = 8e-17
 Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 7/142 (4%)

Query: 11  RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLR 69
           +++LVTG TGF+ K+ +EK+LR  P++ K+Y+L RA    +   RL  E     +F+ LR
Sbjct: 12  KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLR 71

Query: 70  KECPAQLS-----RLHIIEGDILQANLGIKDSDLL-MLQEEVSVVFNGAASLKLEAELKE 123
           ++    L+     ++  + GDI   +LG+KDS+L   + +E+ +V N AA+   +     
Sbjct: 72  EKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDV 131

Query: 124 NVAANTRGTQRLLDIALKMKKL 145
            +  NT G   +L+ A K  K+
Sbjct: 132 ALGINTLGALNVLNFAKKCVKV 153

Length = 491

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 68.1 bits (167), Expect = 4e-14
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 17/130 (13%)

Query: 14  LVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECP 73
            VTGGTGF+G+ L+ +LL    +   V++L R                L   E L     
Sbjct: 4   FVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRR-------------QSLSRLEALAAYWG 49

Query: 74  AQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQ 133
           A   R+  + GD+ +  LG+ ++D+  L  ++  V + AA   L A+ +   AAN  GT+
Sbjct: 50  AD--RVVPLVGDLTEPGLGLSEADIAELG-DIDHVVHLAAIYDLTADEEAQRAANVDGTR 106

Query: 134 RLLDIALKMK 143
            ++++A +++
Sbjct: 107 NVVELAERLQ 116

Length = 657

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 65.5 bits (160), Expect = 2e-13
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 21/136 (15%)

Query: 12  SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71
           +VL+TG TGF+G  LLE+LLR      KV  L RA    + +  +         ERLR+ 
Sbjct: 1   TVLLTGATGFLGAYLLEELLRRSTQA-KVICLVRAA---SEEHAM---------ERLREA 47

Query: 72  CPAQL--------SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKE 123
             +           R+ ++ GD+ +  LG+ D++   L E V  + +  A +       E
Sbjct: 48  LRSYRLWHEDLARERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSE 107

Query: 124 NVAANTRGTQRLLDIA 139
              AN  GT+ +L +A
Sbjct: 108 LRGANVLGTREVLRLA 123

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 61.6 bits (150), Expect = 6e-12
 Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 27/143 (18%)

Query: 11  RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRK 70
           R+VL+TG TGF+G  LL +LL       KV  L RA+            S      RL K
Sbjct: 1   RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQ------------SDEAALARLEK 46

Query: 71  ECPAQL-------SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA---SLKLEAE 120
                         R+ ++ GD+ + +LG+ +     L E V ++ + AA    +   +E
Sbjct: 47  TFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSE 106

Query: 121 LKENVAANTRGTQRLLDIALKMK 143
           L+    AN  GT  +L +A   K
Sbjct: 107 LRG---ANVLGTAEVLRLAATGK 126

Length = 382

>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase

 Score = 58.5 bits (142), Expect = 7e-11
 Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 21/111 (18%)

Query: 11   RSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLR 69
             +V +TG TGF+G  +L  LL R      KV+   RAK            S+    ERLR
Sbjct: 972  ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAK------------SEEAGLERLR 1019

Query: 70   KECPAQ-------LSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVF-NGA 112
            K             SR+ ++ GD+ +   G+ D     L  EV V+  NGA
Sbjct: 1020 KTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGA 1070

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 49.7 bits (119), Expect = 8e-08
 Identities = 38/139 (27%), Positives = 55/139 (39%), Gaps = 29/139 (20%)

Query: 12  SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71
           SVLVTGG+GF G+ L+++LL    + G  Y+            R   F   P  E L   
Sbjct: 1   SVLVTGGSGFFGERLVKQLL----ERGGTYV------------RS--FDIAPPGEALSAW 42

Query: 72  CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRG 131
               +     ++GDI   N      D+         VF+ AA + L          N  G
Sbjct: 43  QHPNIE---FLKGDITDRN------DVEQALSGADCVFHTAAIVPLAGPRDLYWEVNVGG 93

Query: 132 TQRLLDI--ALKMKKLVVS 148
           TQ +LD      ++K V +
Sbjct: 94  TQNVLDACQRCGVQKFVYT 112

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 47.9 bits (114), Expect = 4e-07
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 29/131 (22%)

Query: 12  SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKAR-LAEFSKLPVFERLRK 70
             LVTGG GF+G+ ++  LL    ++ ++ +L +A     P+     E S+         
Sbjct: 1   VCLVTGGGGFLGQHIIRLLLERKEELKEIRVLDKA---FGPELIEHFEKSQGKT------ 51

Query: 71  ECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEA----ELKENVA 126
                   +  IEGDI         S L    + VSVV + AA + +      E  E V 
Sbjct: 52  -------YVTDIEGDIKDL------SFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEV- 97

Query: 127 ANTRGTQRLLD 137
            N  GTQ +L+
Sbjct: 98  -NVNGTQAVLE 107

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 46.8 bits (112), Expect = 6e-07
 Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 34/142 (23%)

Query: 9   AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERL 68
            G+++LVTGG G +G  L+ ++L+      K+ +  R +  L                 L
Sbjct: 1   KGKTILVTGGAGSIGSELVRQILKF--GPKKLIVFDRDENKL---------------HEL 43

Query: 69  RKECPAQ--LSRLHIIEGDILQANLGIKDSDLL---MLQEEVSVVFNGAASLK----LEA 119
            +E  ++    +L  I GD       ++D + L     +    +VF+ AA+LK    +E 
Sbjct: 44  VRELRSRFPHDKLRFIIGD-------VRDKERLRRAFKERGPDIVFH-AAALKHVPSMED 95

Query: 120 ELKENVAANTRGTQRLLDIALK 141
             +E +  N  GT+ ++D A++
Sbjct: 96  NPEEAIKTNVLGTKNVIDAAIE 117

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 44.9 bits (106), Expect = 3e-06
 Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 36/142 (25%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           +LVTGG GF+G  L+E+LL +  D   V  L R + GL                      
Sbjct: 3   ILVTGGAGFIGSHLVERLLAAGHD---VRGLDRLRDGL---------------------- 37

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA----SLKLEAELKENVAAN 128
              LS +  +  D+        D    + +     V + AA         ++  E +  N
Sbjct: 38  DPLLSGVEFVVLDLTDR-----DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVN 92

Query: 129 TRGTQRLLDIALK--MKKLVVS 148
             GT  LL+ A    +K+ V +
Sbjct: 93  VDGTLNLLEAARAAGVKRFVFA 114

Length = 314

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 43/142 (30%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIG-KVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71
           +LVTG TGF+G  L+  LL      G +V  L R        +       LPV       
Sbjct: 1   ILVTGATGFLGSNLVRALLAQ----GYRVRALVR------SGSDAVLLDGLPV------- 43

Query: 72  CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA----SLKLEAELKE-NVA 126
                    ++EGD+  A        L    +    VF+ AA      K   EL   NV 
Sbjct: 44  --------EVVEGDLTDAAS------LAAAMKGCDRVFHLAAFTSLWAKDRKELYRTNVE 89

Query: 127 ANTRGTQRLLDIALK--MKKLV 146
               GT+ +LD AL+  ++++V
Sbjct: 90  ----GTRNVLDAALEAGVRRVV 107

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 43.2 bits (103), Expect = 1e-05
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 30/138 (21%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG G +G  L  ++L+   +  K+ +  R            EF    + + LR+E 
Sbjct: 1   VLVTGGGGSIGSELCRQILKF--NPKKIILFSR-----------DEFKLYEIRQELRQEY 47

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLL---MLQEEVSVVFNGAASLK----LEAELKENV 125
                R  I  GD       ++D + L   M Q  V  VF+ AA+LK    +E    E +
Sbjct: 48  NDPKLRFFI--GD-------VRDRERLERAMEQHGVDTVFH-AAALKHVPLVEYNPMEAI 97

Query: 126 AANTRGTQRLLDIALKMK 143
             N  GT+ + + A++  
Sbjct: 98  KTNVLGTENVAEAAIENG 115

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 41.4 bits (98), Expect = 5e-05
 Identities = 41/149 (27%), Positives = 58/149 (38%), Gaps = 32/149 (21%)

Query: 11  RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRK 70
             +LVTGG GF+G   +  LL   PD     I+   K  LT    L     +        
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLNKYPD---YKIINLDK--LTYAGNLENLEDV-------- 47

Query: 71  ECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKEN 124
              +   R   ++GDI  A L     D L  +E++  V + AA      S+         
Sbjct: 48  ---SSSPRYRFVKGDICDAEL----VDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRT 100

Query: 125 VAANTRGTQRLLDIALK--MKKLV-VSLD 150
              N  GT  LL+ A K  +K+ V +S D
Sbjct: 101 ---NVLGTYTLLEAARKYGVKRFVHISTD 126

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 41.4 bits (98), Expect = 6e-05
 Identities = 34/137 (24%), Positives = 51/137 (37%), Gaps = 29/137 (21%)

Query: 11  RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRK 70
             +LVTGG GF+G   +  +L   PD    +++   K  LT    L   + +        
Sbjct: 1   MKILVTGGAGFIGSNFVRYILNKHPD---DHVVNLDK--LTYAGNLENLADV-------- 47

Query: 71  ECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKEN 124
                  R   ++GDI    L     D L  + +   V + AA      S+   A   + 
Sbjct: 48  ---EDSPRYRFVQGDICDREL----VDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQT 100

Query: 125 VAANTRGTQRLLDIALK 141
              N  GT  LL+ A K
Sbjct: 101 ---NVVGTYTLLEAARK 114

Length = 340

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 40/142 (28%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           +LVTGGTGF+G  L+ +LL+   ++  +                          R R+  
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLG-------------------------RRRRSE 35

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
                R+   EGD+   +   +    L+ + +   V + AA      S +  A+    + 
Sbjct: 36  SLNTGRIRFHEGDLTDPDALER----LLAEVQPDAVIHLAAQSGVGASFEDPADF---IR 88

Query: 127 ANTRGTQRLLDIALKM--KKLV 146
           AN  GT RLL+ A +   K+ V
Sbjct: 89  ANVLGTLRLLEAARRAGVKRFV 110

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 23/133 (17%)

Query: 12  SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71
            +LVTGG GF+G   +  +L   PD  +V +L      LT    L   + L         
Sbjct: 1   RILVTGGAGFIGSNFVRYILNEHPDA-EVIVL----DKLTYAGNLENLADL--------- 46

Query: 72  CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVA---AN 128
                 R   ++GDI    L       L  + +   V + AA   ++  +    A    N
Sbjct: 47  --EDNPRYRFVKGDIGDREL----VSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETN 100

Query: 129 TRGTQRLLDIALK 141
             GT  LL+   K
Sbjct: 101 VVGTYTLLEAVRK 113

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 7e-04
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 34/142 (23%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG GF+G  L+E+LL    ++  +  L   K+   P+ +                 
Sbjct: 2   VLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVK----------------- 44

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLL-MLQEEVSVVFNGAASLKLEAELKENVA---AN 128
                 +  IEGD       I+D +L+    E V  VF+ AA   +   +++ +     N
Sbjct: 45  ----PNVKFIEGD-------IRDDELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVN 93

Query: 129 TRGTQRLLDIALK--MKKLVVS 148
             GT  LL+ A K  +K+ V +
Sbjct: 94  VLGTLNLLEAARKAGVKRFVYA 115

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 30/145 (20%)

Query: 4   VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLP 63
           +     G++VLVTGG G +G  L  ++L+   +  ++ +  R            E+    
Sbjct: 244 IGAMLTGKTVLVTGGGGSIGSELCRQILKF--NPKEIILFSR-----------DEYKLYL 290

Query: 64  VFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLL---MLQEEVSVVFNGAASLK---- 116
           +   LR++ P    +L    GD       ++D D +   M   +V +VF+ AA+LK    
Sbjct: 291 IDMELREKFPE--LKLRFYIGD-------VRDRDRVERAMEGHKVDIVFH-AAALKHVPL 340

Query: 117 LEAELKENVAANTRGTQRLLDIALK 141
           +E   +E +  N  GT+ + + A+K
Sbjct: 341 VEYNPEEAIKTNVLGTENVAEAAIK 365

Length = 588

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 32/138 (23%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           +LVTG  G +G++L  +L  S P +  V  L R +   +P     E+ +L +    R   
Sbjct: 1   ILVTGAAGGLGRLLARRLAAS-PRVIGVDGLDRRRPPGSPPK--VEYVRLDI----RDPA 53

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGT 132
            A + R                         E   V + A  L    +  E    N  GT
Sbjct: 54  AADVFRER-----------------------EADAVVHLAFILDPPRDGAERHRINVDGT 90

Query: 133 QRLLDIALK--MKKLVVS 148
           Q +LD      + ++VV+
Sbjct: 91  QNVLDACAAAGVPRVVVT 108

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 34/152 (22%), Positives = 52/152 (34%), Gaps = 34/152 (22%)

Query: 9   AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERL 68
            G +VL+TGGT  +G  L  K L    + G   I+     G     RLAE  K  +    
Sbjct: 4   TGNTVLITGGTSGIGLALARKFL----EAGNTVIIT----GRRE-ERLAEAKKE-LPNIH 53

Query: 69  RKECPAQLSRLHIIEG------------DILQANLGIKDSDLLMLQEEVSVVFNGAASL- 115
                  +     +E             DIL  N GI          ++    + A+ L 
Sbjct: 54  TIVL--DVGDAESVEALAEALLSEYPNLDILINNAGI------QRPIDLR---DPASDLD 102

Query: 116 KLEAELKENVAANTRGTQRLLDIALKMKKLVV 147
           K + E+  N+    R  +  L    K  +  +
Sbjct: 103 KADTEIDTNLIGPIRLIKAFLPHLKKQPEATI 134

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 41/110 (37%)

Query: 12  SVLVTGGTGFMGKVLLEKLLRSCPDIG-KVYILC----RAKRGLTPKARLAEFSKLPVFE 66
           +VLVTG  GF+G  L E+LLR     G +V  L         GL   A    F       
Sbjct: 1   NVLVTGADGFIGSHLTERLLRE----GHEVRALDIYNSFNSWGLLDNAVHDRF------- 49

Query: 67  RLRKECPAQLSRLHIIEGDILQANLG---IKDSDLLMLQEEVSVVFNGAA 113
                        H I GD+  A+     +K  D         VVF+ AA
Sbjct: 50  -------------HFISGDVRDASEVEYLVKKCD---------VVFHLAA 77

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDI 37
          +LVTGG GF+G  L+ +LL    ++
Sbjct: 1  ILVTGGAGFIGSHLVRRLLERGHEV 25

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
PLN02996	491	fatty acyl-CoA reductase	99.91
PLN02503	605	fatty acyl-CoA reductase 2	99.9
KOG1221|consensus	467		99.9
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.88
KOG1502|consensus	327		99.86
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.85
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.81
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.79
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.77
PLN00198	338	anthocyanidin reductase; Provisional	99.77
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.77
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.76
PLN02214	342	cinnamoyl-CoA reductase	99.76
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.75
PLN02650	351	dihydroflavonol-4-reductase	99.74
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.73
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.73
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.73
PLN02572	442	UDP-sulfoquinovose synthase	99.72
CHL00194	317	ycf39 Ycf39; Provisional	99.71
PLN02583	297	cinnamoyl-CoA reductase	99.71
PRK07201	657	short chain dehydrogenase; Provisional	99.7
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.69
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.69
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.68
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.68
PLN02427	386	UDP-apiose/xylose synthase	99.68
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.68
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.67
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.67
PLN03209	576	translocon at the inner envelope of chloroplast su	99.67
KOG1371|consensus	343		99.67
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.66
PLN02260	668	probable rhamnose biosynthetic enzyme	99.66
PLN02686	367	cinnamoyl-CoA reductase	99.66
KOG1205|consensus	282		99.65
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.65
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.65
PLN02653	340	GDP-mannose 4,6-dehydratase	99.65
PLN02240	352	UDP-glucose 4-epimerase	99.65
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.65
PRK06194	287	hypothetical protein; Provisional	99.65
PRK07063	260	short chain dehydrogenase; Provisional	99.64
PLN02206	442	UDP-glucuronate decarboxylase	99.64
PRK06398	258	aldose dehydrogenase; Validated	99.64
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.64
PRK08339	263	short chain dehydrogenase; Provisional	99.63
PRK06180	277	short chain dehydrogenase; Provisional	99.63
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.62
PRK06197	306	short chain dehydrogenase; Provisional	99.62
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.62
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.62
PRK06128	300	oxidoreductase; Provisional	99.62
PRK05876	275	short chain dehydrogenase; Provisional	99.62
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.62
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.61
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.61
PRK07814	263	short chain dehydrogenase; Provisional	99.61
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.61
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.61
PRK07478	254	short chain dehydrogenase; Provisional	99.61
PRK07775	274	short chain dehydrogenase; Provisional	99.61
PRK06182	273	short chain dehydrogenase; Validated	99.61
PRK12746	254	short chain dehydrogenase; Provisional	99.61
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.61
PRK07576	264	short chain dehydrogenase; Provisional	99.61
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.6
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.6
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.6
PLN02253	280	xanthoxin dehydrogenase	99.6
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.6
PRK06139	330	short chain dehydrogenase; Provisional	99.6
PRK06482	276	short chain dehydrogenase; Provisional	99.6
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.6
KOG1430|consensus	361		99.6
PRK06179	270	short chain dehydrogenase; Provisional	99.6
PRK07774	250	short chain dehydrogenase; Provisional	99.6
PRK05866	293	short chain dehydrogenase; Provisional	99.59
PRK06114	254	short chain dehydrogenase; Provisional	99.59
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.59
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.59
PRK05717	255	oxidoreductase; Validated	99.59
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.59
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.59
PRK06196	315	oxidoreductase; Provisional	99.59
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.59
PRK07109	334	short chain dehydrogenase; Provisional	99.59
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.59
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.59
PRK12939	250	short chain dehydrogenase; Provisional	99.59
PRK05854	313	short chain dehydrogenase; Provisional	99.59
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.59
PRK08628	258	short chain dehydrogenase; Provisional	99.58
PRK06523	260	short chain dehydrogenase; Provisional	99.58
PRK08263	275	short chain dehydrogenase; Provisional	99.58
PRK05867	253	short chain dehydrogenase; Provisional	99.58
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.58
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.58
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.58
PRK06138	252	short chain dehydrogenase; Provisional	99.58
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PRK08589	272	short chain dehydrogenase; Validated	99.58
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.58
PRK07890	258	short chain dehydrogenase; Provisional	99.58
PRK07825	273	short chain dehydrogenase; Provisional	99.58
PRK07985	294	oxidoreductase; Provisional	99.57
PRK08265	261	short chain dehydrogenase; Provisional	99.57
PRK08226	263	short chain dehydrogenase; Provisional	99.57
PRK06841	255	short chain dehydrogenase; Provisional	99.57
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK09186	256	flagellin modification protein A; Provisional	99.57
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.57
PRK06914	280	short chain dehydrogenase; Provisional	99.57
PRK08278	273	short chain dehydrogenase; Provisional	99.57
PRK08267	260	short chain dehydrogenase; Provisional	99.56
PRK12827	249	short chain dehydrogenase; Provisional	99.56
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.56
PRK05872	296	short chain dehydrogenase; Provisional	99.56
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.56
KOG1201|consensus	300		99.56
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.56
PRK07856	252	short chain dehydrogenase; Provisional	99.56
PRK08643	256	acetoin reductase; Validated	99.55
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK12828	239	short chain dehydrogenase; Provisional	99.55
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.55
PRK07806	248	short chain dehydrogenase; Provisional	99.55
PRK07326	237	short chain dehydrogenase; Provisional	99.55
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.55
PRK10538	248	malonic semialdehyde reductase; Provisional	99.55
PRK06172	253	short chain dehydrogenase; Provisional	99.55
PRK05993	277	short chain dehydrogenase; Provisional	99.55
PRK09291	257	short chain dehydrogenase; Provisional	99.55
PRK07102	243	short chain dehydrogenase; Provisional	99.55
PRK12367	245	short chain dehydrogenase; Provisional	99.55
PRK07062	265	short chain dehydrogenase; Provisional	99.55
PRK07067	257	sorbitol dehydrogenase; Provisional	99.54
PRK06500	249	short chain dehydrogenase; Provisional	99.54
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.54
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.54
PRK07677	252	short chain dehydrogenase; Provisional	99.54
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.54
PRK07791	286	short chain dehydrogenase; Provisional	99.54
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.54
PRK07454	241	short chain dehydrogenase; Provisional	99.54
PRK12747	252	short chain dehydrogenase; Provisional	99.53
PRK09242	257	tropinone reductase; Provisional	99.53
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.53
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.53
PRK05650	270	short chain dehydrogenase; Provisional	99.53
PRK05875	276	short chain dehydrogenase; Provisional	99.53
PRK06701	290	short chain dehydrogenase; Provisional	99.53
PRK07060	245	short chain dehydrogenase; Provisional	99.53
PRK07024	257	short chain dehydrogenase; Provisional	99.53
PRK07904	253	short chain dehydrogenase; Provisional	99.53
PRK12937	245	short chain dehydrogenase; Provisional	99.53
PRK07577	234	short chain dehydrogenase; Provisional	99.52
PRK05865	854	hypothetical protein; Provisional	99.52
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.52
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.52
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.52
PRK07035	252	short chain dehydrogenase; Provisional	99.52
PRK06181	263	short chain dehydrogenase; Provisional	99.52
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.51
PRK12744	257	short chain dehydrogenase; Provisional	99.51
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
PRK08303	305	short chain dehydrogenase; Provisional	99.51
PRK12829	264	short chain dehydrogenase; Provisional	99.51
PRK05693	274	short chain dehydrogenase; Provisional	99.51
PRK09072	263	short chain dehydrogenase; Provisional	99.51
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.51
PRK08251	248	short chain dehydrogenase; Provisional	99.51
PRK06101	240	short chain dehydrogenase; Provisional	99.51
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.5
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.5
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.5
PRK06949	258	short chain dehydrogenase; Provisional	99.5
PRK09134	258	short chain dehydrogenase; Provisional	99.5
PLN02778	298	3,5-epimerase/4-reductase	99.5
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.5
PRK12743	256	oxidoreductase; Provisional	99.5
PRK08219	227	short chain dehydrogenase; Provisional	99.5
PRK08703	239	short chain dehydrogenase; Provisional	99.5
PRK09135	249	pteridine reductase; Provisional	99.49
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.49
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.49
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.49
PRK08264	238	short chain dehydrogenase; Validated	99.49
PRK06125	259	short chain dehydrogenase; Provisional	99.49
PRK07074	257	short chain dehydrogenase; Provisional	99.49
PRK12742	237	oxidoreductase; Provisional	99.49
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.48
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.48
PRK06940	275	short chain dehydrogenase; Provisional	99.48
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.48
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.48
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.48
PRK07023	243	short chain dehydrogenase; Provisional	99.48
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.48
PRK06057	255	short chain dehydrogenase; Provisional	99.48
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.48
PRK06198	260	short chain dehydrogenase; Provisional	99.48
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.48
PRK06483	236	dihydromonapterin reductase; Provisional	99.47
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.47
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.47
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.47
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.47
PRK05855	582	short chain dehydrogenase; Validated	99.46
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.46
PRK12320	699	hypothetical protein; Provisional	99.46
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.46
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.46
PRK06484	520	short chain dehydrogenase; Validated	99.46
PRK07201	657	short chain dehydrogenase; Provisional	99.46
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.46
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.45
PRK06123	248	short chain dehydrogenase; Provisional	99.45
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.45
PRK05884	223	short chain dehydrogenase; Provisional	99.45
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.45
PRK06924	251	short chain dehydrogenase; Provisional	99.45
PRK08862	227	short chain dehydrogenase; Provisional	99.44
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.44
PLN02780	320	ketoreductase/ oxidoreductase	99.44
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.44
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.44
PRK07832	272	short chain dehydrogenase; Provisional	99.44
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.44
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.44
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.43
KOG1208|consensus	314		99.43
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.43
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.42
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.42
PRK07831	262	short chain dehydrogenase; Provisional	99.42
PRK06953	222	short chain dehydrogenase; Provisional	99.41
KOG1200|consensus	256		99.41
PRK06484	520	short chain dehydrogenase; Validated	99.41
PRK08177	225	short chain dehydrogenase; Provisional	99.4
PRK07069	251	short chain dehydrogenase; Validated	99.4
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.4
PRK07041	230	short chain dehydrogenase; Provisional	99.39
KOG0725|consensus	270		99.39
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.39
PLN00015	308	protochlorophyllide reductase	99.37
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.37
PRK08324	681	short chain dehydrogenase; Validated	99.37
PRK07578	199	short chain dehydrogenase; Provisional	99.36
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.36
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.36
PRK05599	246	hypothetical protein; Provisional	99.35
PRK08017	256	oxidoreductase; Provisional	99.35
KOG4169|consensus	261		99.34
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.34
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.34
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.33
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.3
PLN02260	668	probable rhamnose biosynthetic enzyme	99.29
KOG1429|consensus	350		99.29
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.28
PLN00016	378	RNA-binding protein; Provisional	99.28
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.28
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.26
KOG2865|consensus	391		99.24
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.23
PRK06720	169	hypothetical protein; Provisional	99.22
KOG1611|consensus	249		99.21
COG1028	251	FabG Dehydrogenases with different specificities (	99.19
KOG1610|consensus	322		99.17
KOG0747|consensus	331		99.16
KOG1207|consensus	245		99.11
KOG1209|consensus	289		99.08
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.08
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.07
KOG1014|consensus	312		99.06
KOG1210|consensus	331		98.97
KOG1199|consensus	260		98.95
KOG4039|consensus	238		98.92
PTZ00325	321	malate dehydrogenase; Provisional	98.91
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.88
KOG1478|consensus	341		98.87
KOG1431|consensus	315		98.8
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.79
PLN00106	323	malate dehydrogenase	98.73
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.72
PRK08309	177	short chain dehydrogenase; Provisional	98.7
COG2910	211	Putative NADH-flavin reductase [General function p	98.65
PRK09620	229	hypothetical protein; Provisional	98.61
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.56
KOG1203|consensus	411		98.52
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.45
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.45
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.45
PRK05086	312	malate dehydrogenase; Provisional	98.42
KOG1372|consensus	376		98.36
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.36
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.32
KOG1204|consensus	253		98.32
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.3
PRK14982	340	acyl-ACP reductase; Provisional	98.28
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.25
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.24
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.22
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.14
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.09
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.06
KOG2774|consensus	366		97.93
KOG4288|consensus	283		97.86
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.83
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.82
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.82
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.82
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.8
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.75
KOG1494|consensus	345		97.75
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.72
KOG2733|consensus	423		97.72
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.69
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.66
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.66
PRK05442	326	malate dehydrogenase; Provisional	97.65
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.49
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.47
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.43
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.39
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.34
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.26
PTZ00117	319	malate dehydrogenase; Provisional	97.21
PRK08223	287	hypothetical protein; Validated	97.17
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.14
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.12
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.1
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.09
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.09
PRK06223	307	malate dehydrogenase; Reviewed	97.05
KOG1202|consensus	2376		97.05
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.04
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.03
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.02
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.01
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.93
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.93
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.91
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.89
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.85
PLN02383	344	aspartate semialdehyde dehydrogenase	96.83
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.82
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	96.77
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.77
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.74
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.72
PLN02602	350	lactate dehydrogenase	96.71
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.7
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.69
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.68
PRK09496	453	trkA potassium transporter peripheral membrane com	96.67
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.62
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.6
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.55
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.52
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.51
PRK08328	231	hypothetical protein; Provisional	96.49
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.49
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.46
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.41
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.37
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.36
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.34
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.32
COG3268	382	Uncharacterized conserved protein [Function unknow	96.3
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.29
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.26
PRK07411	390	hypothetical protein; Validated	96.23
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.22
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.21
PRK14851	679	hypothetical protein; Provisional	96.19
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.18
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.17
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.12
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.05
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.05
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.98
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.94
KOG1198|consensus	347		95.91
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.89
PRK13243	333	glyoxylate reductase; Reviewed	95.88
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.88
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.87
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.8
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.8
PRK06932	314	glycerate dehydrogenase; Provisional	95.79
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	95.79
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.75
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.75
PRK06487	317	glycerate dehydrogenase; Provisional	95.73
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.72
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.7
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.7
PRK14852	989	hypothetical protein; Provisional	95.65
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.64
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.61
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	95.6
PLN02928	347	oxidoreductase family protein	95.55
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.55
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	95.55
PRK06436	303	glycerate dehydrogenase; Provisional	95.5
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.5
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.49
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.42
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.42
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.41
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.39
PLN02306	386	hydroxypyruvate reductase	95.36
PRK06153	393	hypothetical protein; Provisional	95.28
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.28
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	95.23
PLN00203	519	glutamyl-tRNA reductase	95.18
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	95.17
PRK07574	385	formate dehydrogenase; Provisional	95.08
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	95.07
PRK07877	722	hypothetical protein; Provisional	95.04
PRK04148	134	hypothetical protein; Provisional	95.04
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	94.98
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.97
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	94.94
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.8
PRK09496	453	trkA potassium transporter peripheral membrane com	94.77
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	94.72
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	94.71
PRK06849	389	hypothetical protein; Provisional	94.6
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.59
PLN03139	386	formate dehydrogenase; Provisional	94.58
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	94.55
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.51
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	94.49
PRK08306	296	dipicolinate synthase subunit A; Reviewed	94.47
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.44
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	94.43
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.41
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	94.32
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	94.27
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	94.25
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.23
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	93.99
KOG4022|consensus	236		93.98
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	93.97
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.94
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	93.93
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	93.9
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	93.88
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.73
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	93.72
PRK08655	437	prephenate dehydrogenase; Provisional	93.69
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	93.68
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.6
KOG2013|consensus	603		93.59
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.57
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.57
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.52
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	93.51
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.49
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.47
PRK12480	330	D-lactate dehydrogenase; Provisional	93.47
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	93.43
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.36
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.35
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.28
PRK08605	332	D-lactate dehydrogenase; Validated	93.25
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	93.21
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.17
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.15
PRK06444	197	prephenate dehydrogenase; Provisional	93.13
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	93.12
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	93.11
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.09
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.09
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	93.0
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	92.97
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	92.96
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.92
PRK10669	558	putative cation:proton antiport protein; Provision	92.89
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	92.88
PRK13304	265	L-aspartate dehydrogenase; Reviewed	92.82
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	92.8
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.77
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	92.74
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	92.73
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	92.7
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.68
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.65
KOG0023|consensus	360		92.58
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	92.48
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.4

>PLN02996 fatty acyl-CoA reductase

Probab=99.91  E-value=5.1e-23  Score=159.24  Aligned_cols=151  Identities=30%  Similarity=0.506  Sum_probs=125.0

Q ss_pred             cccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHH-HHhcChhhhhhhhhccc-----c
Q psy11862          2 GDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLA-EFSKLPVFERLRKECPA-----Q   75 (152)
Q Consensus         2 ~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~   75 (152)
                      +.+.+.+++++++|||||||+|+++++.|++.++++.+|+++.|.+...+..+++. ++.....++.++...+.     .
T Consensus         3 ~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~   82 (491)
T PLN02996          3 GSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLI   82 (491)
T ss_pred             ccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhh
Confidence            34667889999999999999999999999998888899999999988888888875 55554444444332221     1


Q ss_pred             CCcEEEEEcccCCCCCCCChhH-HHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         76 LSRLHIIEGDILQANLGIKDSD-LLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        76 ~~~~~~~~~D~~~~~~~~~~~~-~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ..++.++.+|++++.+|++..+ +..+++++|+|||+|+..++..++...+++|+.++.++++++....++++||++|
T Consensus        83 ~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vS  160 (491)
T PLN02996         83 SEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVS  160 (491)
T ss_pred             hcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence            2689999999999999998655 5677889999999999888777788899999999999999999865678999987

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.90  E-value=8.9e-23  Score=159.95  Aligned_cols=149  Identities=35%  Similarity=0.573  Sum_probs=127.8

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHH-HHhcChhhhhhhhhccc-----cCC
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLA-EFSKLPVFERLRKECPA-----QLS   77 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~   77 (152)
                      +.+.+++++|+|||||||+|+++++.|++.++++.+|+++.|.+...+..+++. ++.....+..++...+.     ...
T Consensus       113 I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~  192 (605)
T PLN02503        113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLS  192 (605)
T ss_pred             hhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccc
Confidence            346778999999999999999999999998888899999999988888888885 66666666666554332     246


Q ss_pred             cEEEEEcccCCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         78 RLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        78 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++..+.+|++++.+|++++....+.+.+|+|||+|+..++..++...+++|+.++.+++++|.....+++||++|
T Consensus       193 Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vS  267 (605)
T PLN02503        193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVS  267 (605)
T ss_pred             cEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEcc
Confidence            899999999999999999888888889999999999988777888899999999999999999875678899987

>KOG1221|consensus

Probab=99.90  E-value=9e-23  Score=154.06  Aligned_cols=150  Identities=41%  Similarity=0.727  Sum_probs=141.4

Q ss_pred             ccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          3 DVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         3 ~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      ++.+.+++++++|||||||+|+-+++.|++..+++.++|++.|.+.+.++.+++..+....+++.+.+..+....++..+
T Consensus         5 ~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi   84 (467)
T KOG1221|consen    5 DIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPI   84 (467)
T ss_pred             cHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceec
Confidence            35677899999999999999999999999998899999999999999999999999998899999999988888999999


Q ss_pred             EcccCCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         83 EGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        83 ~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .||++++++|+++.++..+.+.+|+|||+||...+.+.++....+|+.|+.+++++|+++.+.+.++++|
T Consensus        85 ~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVS  154 (467)
T KOG1221|consen   85 AGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVS  154 (467)
T ss_pred             cccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEee
Confidence            9999999999999998988889999999999999999999999999999999999999987888999887

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.88  E-value=6.7e-23  Score=146.44  Aligned_cols=133  Identities=41%  Similarity=0.587  Sum_probs=95.1

Q ss_pred             EcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHh-cChhhhhhhhhccccCCcEEEEEcccCCCCCCC
Q psy11862         15 VTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS-KLPVFERLRKECPAQLSRLHIIEGDILQANLGI   93 (152)
Q Consensus        15 ItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   93 (152)
                      |||||||+|.+++.+|++.+..+ +|+|+.|.++.....+++.+.. ..+++.....   ....+++++.+|++++.+|+
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~---~~~~ri~~v~GDl~~~~lGL   76 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDK---EALSRIEVVEGDLSQPNLGL   76 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-H---HHTTTEEEEE--TTSGGGG-
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhh---hhhccEEEEeccccccccCC
Confidence            79999999999999999997656 9999999877666777775443 3444333211   12479999999999999999


Q ss_pred             ChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         94 KDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        94 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++++..+.+.+|.|||+|+..++..+++++.+.|+.++.+++++|... ..++|+|+|
T Consensus        77 ~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iS  134 (249)
T PF07993_consen   77 SDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYIS  134 (249)
T ss_dssp             -HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEE
T ss_pred             ChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEec
Confidence            9999999999999999999999998899999999999999999999976 345999987

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1502|consensus

Probab=99.86  E-value=9.4e-21  Score=137.48  Aligned_cols=122  Identities=22%  Similarity=0.331  Sum_probs=100.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++|+||||+||||++|++.|+++||   .|...+|++....-.+-+.++.             ....+...+..|+.+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY---~V~gtVR~~~~~k~~~~L~~l~-------------~a~~~l~l~~aDL~d   68 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY---TVRGTVRDPEDEKKTEHLRKLE-------------GAKERLKLFKADLLD   68 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC---EEEEEEcCcchhhhHHHHHhcc-------------cCcccceEEeccccc
Confidence            678999999999999999999999999   6889999876432222333332             223568999999999


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchh--hHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEA--ELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      .+...+.++|+|||.|....+..  +..++++..+.|+.+++++|++...++|+|++|
T Consensus        69 ~~------sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TS  128 (327)
T KOG1502|consen   69 EG------SFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTS  128 (327)
T ss_pred             cc------hHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEec
Confidence            77      69999999999999999877532  244799999999999999999986799999987

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.85  E-value=1.4e-20  Score=137.85  Aligned_cols=134  Identities=31%  Similarity=0.389  Sum_probs=116.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      +++++||||||+|.+++++|+.+-.  .+|+|++|.++.+...++++.....     ...+.+....+++++.+|+..+.
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~-----~~~~~e~~~~ri~vv~gDl~e~~   73 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDL-----YRHWDELSADRVEVVAGDLAEPD   73 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhh-----hhhhhhhhcceEEEEeccccccc
Confidence            4799999999999999999999844  6999999988877777777665541     22233344689999999999999


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +|++..++..+.+.+|.|||+|+..++-.+++++...|+.|+..++++|... +.|.++|+|
T Consensus        74 lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVS  134 (382)
T COG3320          74 LGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVS  134 (382)
T ss_pred             CCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEe
Confidence            9999999999999999999999999999999999999999999999999986 678899887

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.81  E-value=2.5e-19  Score=129.97  Aligned_cols=113  Identities=30%  Similarity=0.329  Sum_probs=89.7

Q ss_pred             EEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCC
Q psy11862         14 LVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGI   93 (152)
Q Consensus        14 lItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   93 (152)
                      |||||+||+|++|+++|+++|+ +..|.++++....... ..+..                 .....++.+|+++++   
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~-~~~~~-----------------~~~~~~~~~Di~d~~---   58 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFL-KDLQK-----------------SGVKEYIQGDITDPE---   58 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccc-hhhhc-----------------ccceeEEEeccccHH---
Confidence            6999999999999999999984 3477777776542210 01110                 123348999999966   


Q ss_pred             ChhHHHHHhccccEEEeccccccch--hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         94 KDSDLLMLQEEVSVVFNGAASLKLE--AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        94 ~~~~~~~~~~~~d~vi~~a~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                         ++.+.++++|+|||+|+.....  .+.+.++++|+.|+.+++++|.+. ++++|||+|
T Consensus        59 ---~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytS  115 (280)
T PF01073_consen   59 ---SLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTS  115 (280)
T ss_pred             ---HHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence               7999999999999999976643  467779999999999999999997 899999997

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.79  E-value=5.9e-19  Score=134.94  Aligned_cols=126  Identities=27%  Similarity=0.387  Sum_probs=103.5

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      +...+++|+++||||+|.+|+++++++++.++  +++++++|++... .....+.+..            +  ..++.++
T Consensus       244 i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~~el~~~~------------~--~~~~~~~  307 (588)
T COG1086         244 IGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLIDMELREKF------------P--ELKLRFY  307 (588)
T ss_pred             HHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHHHHHHhhC------------C--CcceEEE
Confidence            44567999999999999999999999999865  7999999976521 1122222211            1  3678899


Q ss_pred             EcccCCCCCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         83 EGDILQANLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        83 ~~D~~~~~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      -+|+.|.+      .+...+++  +|+|||.|+..+.   +.++.+.+++|+.||.|++++|.+. ++++||++|
T Consensus       308 igdVrD~~------~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iS  375 (588)
T COG1086         308 IGDVRDRD------RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLIS  375 (588)
T ss_pred             ecccccHH------HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEe
Confidence            99999965      68889986  9999999998875   7888999999999999999999998 899999987

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.77  E-value=8.1e-18  Score=125.55  Aligned_cols=126  Identities=26%  Similarity=0.246  Sum_probs=93.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+||||++++++|++.|+   .|++++|.....  ...+......     .   ......++.++.+|+
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~---~V~~~d~~~~~~--~~~~~~~~~~-----~---~~~~~~~~~~~~~Di   78 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQ---TVIGLDNFSTGY--QHNLDDVRTS-----V---SEEQWSRFIFIQGDI   78 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCCCcc--hhhhhhhhhc-----c---ccccCCceEEEEccC
Confidence            35778999999999999999999999986   678888754321  1111111100     0   000124678899999


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .+.+      ++..+++++|+|||+|+....   ..+....+++|+.++.++++++.+. ++++|||+|
T Consensus        79 ~d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~S  140 (348)
T PRK15181         79 RKFT------DCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAA  140 (348)
T ss_pred             CCHH------HHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEee
Confidence            9854      688888899999999997553   2345568999999999999999987 788999986

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.77  E-value=1.1e-17  Score=124.29  Aligned_cols=127  Identities=20%  Similarity=0.294  Sum_probs=91.9

Q ss_pred             cccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862          2 GDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHI   81 (152)
Q Consensus         2 ~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (152)
                      .+.-. +.+++++||||+||||++++++|++.|+   +|+++.|+.........+..+             .. ..++.+
T Consensus         2 ~~~~~-~~~~~vlItG~~GfIG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~-------------~~-~~~~~~   63 (338)
T PLN00198          2 ATLTP-TGKKTACVIGGTGFLASLLIKLLLQKGY---AVNTTVRDPENQKKIAHLRAL-------------QE-LGDLKI   63 (338)
T ss_pred             CcccC-CCCCeEEEECCchHHHHHHHHHHHHCCC---EEEEEECCCCCHHHHHHHHhc-------------CC-CCceEE
Confidence            34444 4578999999999999999999999987   566777764311000001110             00 135788


Q ss_pred             EEcccCCCCCCCChhHHHHHhccccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         82 IEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        82 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.+|+++++      ++.+.++++|+|||+|+....  ......++++|+.++.++++++.+..++++||++|
T Consensus        64 ~~~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~S  130 (338)
T PLN00198         64 FGADLTDEE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTS  130 (338)
T ss_pred             EEcCCCChH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEee
Confidence            999999865      578888899999999996543  23334577999999999999998864578999886

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.77  E-value=1.8e-17  Score=122.14  Aligned_cols=122  Identities=20%  Similarity=0.285  Sum_probs=90.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++++++||||+||||++++++|+++|+   .|.+++|+.......+.+...             .....++.++.+|+++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dl~~   66 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGY---TVKATVRDPNDPKKTEHLLAL-------------DGAKERLHLFKANLLE   66 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCC---EEEEEEcCCCchhhHHHHHhc-------------cCCCCceEEEeccccC
Confidence            468999999999999999999999997   667777764321111111100             0012468899999998


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.      .+..+++++|+|||+|+....  ..+...++++|+.++.++++++.+..++++||++|
T Consensus        67 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~S  126 (322)
T PLN02662         67 EG------SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTS  126 (322)
T ss_pred             cc------hHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEcc
Confidence            76      588888999999999986532  22223688999999999999998764678999987

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.76  E-value=2.6e-17  Score=121.48  Aligned_cols=122  Identities=19%  Similarity=0.269  Sum_probs=91.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++++||||+|+||++++++|++.|+   .|++..|+....   +.+..+...          .....++.++.+|+++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~~~~Dl~~   67 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY---TVKATVRDLTDR---KKTEHLLAL----------DGAKERLKLFKADLLE   67 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCCcch---HHHHHHHhc----------cCCCCceEEEecCCCC
Confidence            468999999999999999999999987   577777765421   112211110          0012468889999998


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      .+.++++++|+|||+|+....  ..+...++++|+.++.++++++.+..++++||++|
T Consensus        68 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~S  127 (322)
T PLN02986         68 ES------SFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTS  127 (322)
T ss_pred             cc------hHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence            76      588888899999999997532  23344578999999999999998754678999987

>PLN02214 cinnamoyl-CoA reductase

Probab=99.76  E-value=2.9e-17  Score=122.36  Aligned_cols=126  Identities=20%  Similarity=0.230  Sum_probs=95.3

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |+.-....++++++||||+||||++++++|+++|+   .|.+++|+..... ...+..+.             ....++.
T Consensus         1 ~~~~~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~-~~~~~~~~-------------~~~~~~~   63 (342)
T PLN02214          1 MPVDVASPAGKTVCVTGAGGYIASWIVKILLERGY---TVKGTVRNPDDPK-NTHLRELE-------------GGKERLI   63 (342)
T ss_pred             CCcccccCCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCchhhh-HHHHHHhh-------------CCCCcEE
Confidence            34444456788999999999999999999999997   6777787643110 11111110             0123578


Q ss_pred             EEEcccCCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++.+|++++.      ++...++++|+|||+|+...  .++...+++|+.++.++++++.+. ++++||++|
T Consensus        64 ~~~~Dl~d~~------~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~S  126 (342)
T PLN02214         64 LCKADLQDYE------ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITS  126 (342)
T ss_pred             EEecCcCChH------HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEec
Confidence            8899999865      68888889999999999753  456778999999999999999987 688999986

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.75  E-value=1.5e-18  Score=124.89  Aligned_cols=120  Identities=29%  Similarity=0.367  Sum_probs=81.8

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccC--CcEEEEEcccCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQL--SRLHIIEGDILQAN   90 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~   90 (152)
                      ||||||+|.||++++++|++.++  .++++++|++..   ...+..        +++...+...  ..+..+.+|++|++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~---l~~l~~--------~l~~~~~~~~v~~~~~~vigDvrd~~   67 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENK---LYELER--------ELRSRFPDPKVRFEIVPVIGDVRDKE   67 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHH---HHHHHH--------HCHHHC--TTCEEEEE--CTSCCHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhH---HHHHHH--------HHhhcccccCcccccCceeecccCHH
Confidence            79999999999999999999876  689999986431   111111        1111111101  12345688999865


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            .+..+++  ++|+|||.|+..+.   +.++.+.+++|+.|+.+++++|.+. ++++||++|
T Consensus        68 ------~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~IS  127 (293)
T PF02719_consen   68 ------RLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFIS  127 (293)
T ss_dssp             ------HHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEE
T ss_pred             ------HHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEcc
Confidence                  6888988  89999999998875   6778889999999999999999998 799999987

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.75  E-value=3.5e-17  Score=121.99  Aligned_cols=135  Identities=31%  Similarity=0.408  Sum_probs=101.8

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +|+||||+|++|++++++|++.|+. .+|++++|+.......+++........   +... .....++.++.+|++++.+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~---~~~~-~~~~~~v~~~~~D~~~~~~   75 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYR---LWQE-DLARERIEVVAGDLSEPRL   75 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhC---CCCc-hhhhCCEEEEeCCcCcccC
Confidence            5899999999999999999999753 378999997653323333332211100   0000 0001478999999999998


Q ss_pred             CCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         92 GIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        92 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++..+.+..+..++|+|||+|+..+...++..+.+.|+.++.++++++... +.++|+++|
T Consensus        76 gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iS  135 (367)
T TIGR01746        76 GLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVS  135 (367)
T ss_pred             CcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEc
Confidence            888888888888999999999988766677888899999999999999886 567798876

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.74  E-value=6.9e-17  Score=120.59  Aligned_cols=122  Identities=20%  Similarity=0.290  Sum_probs=90.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ..++++||||+||||++++++|++.|+   +|++++|+....   +.+......          .....++.++.+|+++
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~---~V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~v~~Dl~d   67 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGY---TVRATVRDPANV---KKVKHLLDL----------PGATTRLTLWKADLAV   67 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCC---EEEEEEcCcchh---HHHHHHHhc----------cCCCCceEEEEecCCC
Confidence            357999999999999999999999987   677777764321   111111100          0011357889999998


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccch--hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLE--AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.      .+..+++++|+|||+|+.....  .+....+++|+.++.++++++.+.+.+++||++|
T Consensus        68 ~~------~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~S  127 (351)
T PLN02650         68 EG------SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTS  127 (351)
T ss_pred             hh------hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            65      5788888999999999865432  2334688999999999999999864478999986

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.73  E-value=2.7e-17  Score=117.48  Aligned_cols=112  Identities=27%  Similarity=0.364  Sum_probs=87.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+||||||.|+||++.+.+|++.|+   .|++++.-..+.  .+.+..                  ....++.+|+.|++
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~---~vvV~DNL~~g~--~~~v~~------------------~~~~f~~gDi~D~~   57 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGH---EVVVLDNLSNGH--KIALLK------------------LQFKFYEGDLLDRA   57 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCC---eEEEEecCCCCC--HHHhhh------------------ccCceEEeccccHH
Confidence            5899999999999999999999998   455665433321  111111                  11578999999976


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            .+.+.+.  ++|+|||+||.....   +.+-+.++.|+.++..|++++.+. ++++|||-|
T Consensus        58 ------~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSS  117 (329)
T COG1087          58 ------LLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSS  117 (329)
T ss_pred             ------HHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEec
Confidence                  3777776  799999999977653   344558999999999999999998 799999976

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.73  E-value=1.3e-16  Score=117.90  Aligned_cols=121  Identities=19%  Similarity=0.295  Sum_probs=90.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+||||++++++|++.|+   .|++++|+....  .+ .......          .....++.++.+|++++
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~---~V~~~~r~~~~~--~~-~~~~~~~----------~~~~~~~~~~~~D~~d~   68 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGY---TINATVRDPKDR--KK-TDHLLAL----------DGAKERLKLFKADLLDE   68 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC---EEEEEEcCCcch--hh-HHHHHhc----------cCCCCceEEEeCCCCCc
Confidence            68999999999999999999999987   566677764321  11 1111000          00124688899999986


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++++|+|||+||....   ..++...+++|+.++.++++++.+..+.++||++|
T Consensus        69 ~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~S  128 (325)
T PLN02989         69 G------SFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTS  128 (325)
T ss_pred             h------HHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEec
Confidence            6      588888899999999996532   24466789999999999999998753567899876

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.73  E-value=1.1e-16  Score=118.44  Aligned_cols=120  Identities=25%  Similarity=0.378  Sum_probs=91.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|.. ..|++++|+...   .+.+....            .  ..++.++.+|++
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~-~~V~~~~r~~~~---~~~~~~~~------------~--~~~~~~v~~Dl~   63 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNP-KKIIIYSRDELK---QWEMQQKF------------P--APCLRFFIGDVR   63 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCC-cEEEEEcCChhH---HHHHHHHh------------C--CCcEEEEEccCC
Confidence            46899999999999999999999998622 367777775321   11111110            0  146888999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      |++      ++.+.++++|+|||+||....   ..+....+++|+.++.++++++.+. ++++||++|
T Consensus        64 d~~------~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~S  124 (324)
T TIGR03589        64 DKE------RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALS  124 (324)
T ss_pred             CHH------HHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence            854      688888899999999997542   3345568999999999999999987 678999886

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.72  E-value=1.9e-16  Score=121.56  Aligned_cols=127  Identities=18%  Similarity=0.144  Sum_probs=88.4

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-C-------------HHHHHHHHhcChhhhhhh
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-T-------------PKARLAEFSKLPVFERLR   69 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~-------------~~~~~~~~~~~~~~~~~~   69 (152)
                      ....+++++++||||+||||++++++|++.|+   .|++++|..... .             ..+.+..+..        
T Consensus        41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------  109 (442)
T PLN02572         41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGY---EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE--------  109 (442)
T ss_pred             CCccccCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeccccccccccccccccccccchHHHHHHHHH--------
Confidence            44567889999999999999999999999987   456655321100 0             0111111100        


Q ss_pred             hhccccCCcEEEEEcccCCCCCCCChhHHHHHhc--cccEEEeccccccch------hhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         70 KECPAQLSRLHIIEGDILQANLGIKDSDLLMLQE--EVSVVFNGAASLKLE------AELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        70 ~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~~------~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                          ....++.++.+|++|++      .+.++++  ++|+|||+|+.....      .++...+++|+.++.++++++..
T Consensus       110 ----~~~~~v~~v~~Dl~d~~------~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~  179 (442)
T PLN02572        110 ----VSGKEIELYVGDICDFE------FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKE  179 (442)
T ss_pred             ----hhCCcceEEECCCCCHH------HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence                01246889999999854      5777776  589999999764321      22345678999999999999998


Q ss_pred             cCCCc-ceEecC
Q psy11862        142 MKKLV-VSLDIG  152 (152)
Q Consensus       142 ~~~~~-~~v~~S  152 (152)
                      . +++ +||++|
T Consensus       180 ~-gv~~~~V~~S  190 (442)
T PLN02572        180 F-APDCHLVKLG  190 (442)
T ss_pred             h-CCCccEEEEe
Confidence            7 564 898876

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.71  E-value=8e-17  Score=118.79  Aligned_cols=109  Identities=21%  Similarity=0.242  Sum_probs=86.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+||||+|++|++++++|+++|+   .|.+++|+....   ..+.                  ..+++++.+|+.+++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~---~V~~l~R~~~~~---~~l~------------------~~~v~~v~~Dl~d~~   56 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGY---QVRCLVRNLRKA---SFLK------------------EWGAELVYGDLSLPE   56 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcChHHh---hhHh------------------hcCCEEEECCCCCHH
Confidence            4899999999999999999999997   678888864211   0000                  136788999999865


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++...++++|+|||+++..  ..+.....++|+.++.+++++++.. ++++||++|
T Consensus        57 ------~l~~al~g~d~Vi~~~~~~--~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~S  109 (317)
T CHL00194         57 ------TLPPSFKGVTAIIDASTSR--PSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFS  109 (317)
T ss_pred             ------HHHHHHCCCCEEEECCCCC--CCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEec
Confidence                  6888999999999987643  2334457788999999999999997 789999987

>PLN02583 cinnamoyl-CoA reductase

Probab=99.71  E-value=3.5e-16  Score=114.47  Aligned_cols=122  Identities=16%  Similarity=0.195  Sum_probs=90.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++++||||+|+||++++++|+++|+   .|+++.|+.......+.+..+.             ....++.++.+|+++
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~l~-------------~~~~~~~~~~~Dl~d   68 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGY---TVHAAVQKNGETEIEKEIRGLS-------------CEEERLKVFDVDPLD   68 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEEcCchhhhHHHHHHhcc-------------cCCCceEEEEecCCC
Confidence            357899999999999999999999997   6677777533222111122110             012468889999998


Q ss_pred             CCCCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++...+.++|+|+|.++... ....+..++++|+.++.++++++.+..++++||++|
T Consensus        69 ~~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~S  127 (297)
T PLN02583         69 YH------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTS  127 (297)
T ss_pred             HH------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence            65      68888899999999876443 223456789999999999999998864578999986

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.7e-16  Score=125.85  Aligned_cols=122  Identities=28%  Similarity=0.456  Sum_probs=94.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHh--hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLR--SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~--~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      |+|+||||+|+||++++++|++  .|+   .|++++|+..    ...+..+...           ....+++++.+|+++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~---~V~~l~R~~~----~~~~~~~~~~-----------~~~~~v~~~~~Dl~~   62 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREA---TVHVLVRRQS----LSRLEALAAY-----------WGADRVVPLVGDLTE   62 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCC---EEEEEECcch----HHHHHHHHHh-----------cCCCcEEEEecccCC
Confidence            4799999999999999999994  554   7889998543    2222222110           001568899999999


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +..++..+.+..+ .++|+|||+||..+.........++|+.++.++++++.+. +.++||++|
T Consensus        63 ~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~S  124 (657)
T PRK07201         63 PGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVS  124 (657)
T ss_pred             ccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEe
Confidence            8766666667666 8999999999987766666778899999999999999987 678999886

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.69  E-value=6.3e-16  Score=115.37  Aligned_cols=120  Identities=26%  Similarity=0.267  Sum_probs=89.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+||||+++++.|++.|+   .|++++|+....  .+....+..              ..++.++.+|++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~---~V~~~~r~~~~~--~~~~~~~~~--------------~~~~~~~~~Dl~   62 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGA---EVYGYSLDPPTS--PNLFELLNL--------------AKKIEDHFGDIR   62 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCC---EEEEEeCCCccc--hhHHHHHhh--------------cCCceEEEccCC
Confidence            4679999999999999999999999987   677788765421  111111100              135677899998


Q ss_pred             CCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.++++  ++|+|||+||....   ..++...+++|+.++.++++++...+..++||++|
T Consensus        63 ~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~S  126 (349)
T TIGR02622        63 DAA------KLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVT  126 (349)
T ss_pred             CHH------HHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            854      5777776  46999999996432   34566788999999999999998763367899876

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.69  E-value=8.3e-16  Score=109.53  Aligned_cols=123  Identities=21%  Similarity=0.264  Sum_probs=89.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+++||.++++.|+++|+   .+++++|+.+  .+.+..+++..            .....+.++++|+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~---~liLvaR~~~--kL~~la~~l~~------------~~~v~v~vi~~DL   65 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGY---NLILVARRED--KLEALAKELED------------KTGVEVEVIPADL   65 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCcHH--HHHHHHHHHHH------------hhCceEEEEECcC
Confidence            36789999999999999999999999997   7789998743  22222122211            1236788999999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.++..       .+|++|||||+..+       .+...+++++|+.+...|.++..+.   ++-+++|
T Consensus        66 s~~~------~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~Ii  139 (265)
T COG0300          66 SDPE------ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHII  139 (265)
T ss_pred             CChh------HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence            9976      3444332       68999999997653       4556669999999999998887642   2446777


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      .++
T Consensus       140 NI~  142 (265)
T COG0300         140 NIG  142 (265)
T ss_pred             EEe
Confidence            764

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.68  E-value=6.5e-16  Score=110.17  Aligned_cols=120  Identities=26%  Similarity=0.288  Sum_probs=93.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |++|||||.||||++.++.+++..+. ..|++++.-.-..+ .+.+..+..              .+++.++.+|+.|++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn-~~~l~~~~~--------------~~~~~fv~~DI~D~~   64 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAGN-LENLADVED--------------SPRYRFVQGDICDRE   64 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccCC-HHHHHhhhc--------------CCCceEEeccccCHH
Confidence            57999999999999999999998655 45777765433222 233333322              368999999999966


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            .+.++++  .+|+|+|.|+.++.   -..+..++++|+.||.+|++++++....-||+++|
T Consensus        65 ------~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HIS  125 (340)
T COG1088          65 ------LVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHIS  125 (340)
T ss_pred             ------HHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEec
Confidence                  5888887  69999999999875   35567799999999999999999984335899887

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.68  E-value=7.7e-16  Score=115.06  Aligned_cols=119  Identities=23%  Similarity=0.303  Sum_probs=86.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++++||||+||||++++++|+++|+   .|++++|+..  ........+             . ...++.++.+|+++
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~---~V~~~~r~~~--~~~~~~~~~-------------~-~~~~~~~~~~Dl~~   69 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGY---TVHATLRDPA--KSLHLLSKW-------------K-EGDRLRLFRADLQE   69 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCChH--HHHHHHHhh-------------c-cCCeEEEEECCCCC
Confidence            467999999999999999999999987   6677777532  111111111             0 02468889999998


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccch-----hhHH-----HHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLE-----AELK-----ENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~-----~~~~-----~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.++++++|+|||+|+.....     .+..     .+++.|+.++.++++++.+..++++||++|
T Consensus        70 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~S  137 (353)
T PLN02896         70 EG------SFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTS  137 (353)
T ss_pred             HH------HHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEe
Confidence            54      6888888999999999975421     1232     245566799999999998864478999876

>PLN02427 UDP-apiose/xylose synthase

Probab=99.68  E-value=8e-16  Score=116.25  Aligned_cols=119  Identities=16%  Similarity=0.130  Sum_probs=86.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.|+|+||||+||||++++++|++. |+   .|++++|+...      ...+....        ......+++++.+|+.
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~---~V~~l~r~~~~------~~~l~~~~--------~~~~~~~~~~~~~Dl~   75 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPH---KVLALDVYNDK------IKHLLEPD--------TVPWSGRIQFHRINIK   75 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCC---EEEEEecCchh------hhhhhccc--------cccCCCCeEEEEcCCC
Confidence            4578999999999999999999998 45   67778775321      11111000        0011246889999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++.      .+.++++++|+|||+|+....   ..+..+.+..|+.++.+++++|.+. + ++||++|
T Consensus        76 d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~S  135 (386)
T PLN02427         76 HDS------RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFS  135 (386)
T ss_pred             ChH------HHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEe
Confidence            865      688888899999999996542   2233456678999999999999876 4 7899887

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.68  E-value=1e-15  Score=114.15  Aligned_cols=113  Identities=19%  Similarity=0.217  Sum_probs=85.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +|+|+||||+||||++++++|++. |+   .|++++|+..      ....+..              ...+.++.+|+.+
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~---~V~~~~r~~~------~~~~~~~--------------~~~~~~~~~Dl~~   57 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDW---EVYGMDMQTD------RLGDLVN--------------HPRMHFFEGDITI   57 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCC---eEEEEeCcHH------HHHHhcc--------------CCCeEEEeCCCCC
Confidence            368999999999999999999986 55   6778877432      1111111              1468889999974


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.     +.+.++++++|+|||+|+....   ..++...+++|+.++.+++++|.+. + ++||++|
T Consensus        58 ~~-----~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~S  117 (347)
T PRK11908         58 NK-----EWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPS  117 (347)
T ss_pred             CH-----HHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEe
Confidence            21     2466777899999999997543   3455668899999999999999986 4 6999886

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.67  E-value=1.1e-15  Score=113.73  Aligned_cols=123  Identities=23%  Similarity=0.256  Sum_probs=86.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++||||+||||++++++|++.|+   .|++++|+..... .+.+..+...     .   ......++.++.+|++|++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~-~~~~~~~~~~-----~---~~~~~~~~~~~~~Dl~d~~   68 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGY---EVHGLIRRSSSFN-TQRIEHIYED-----P---HNVNKARMKLHYGDLTDSS   68 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCC---EEEEEecCCcccc-hhhhhhhhhc-----c---ccccccceeEEEeccCCHH
Confidence            5899999999999999999999987   6788888653210 1122211100     0   0001246889999999854


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHhcCCC---cceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALKMKKL---VVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~S  152 (152)
                            ++.++++  ++|+|||+|+.....   ......+++|+.++.+++++|.+. ++   .+||++|
T Consensus        69 ------~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~S  131 (343)
T TIGR01472        69 ------NLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQAS  131 (343)
T ss_pred             ------HHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEec
Confidence                  5777777  469999999975532   233456788999999999999886 33   3788876

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.67  E-value=1.3e-15  Score=113.76  Aligned_cols=120  Identities=24%  Similarity=0.285  Sum_probs=84.8

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+||||+++++.|+++|+.  .+++..|....... ..+....              ...++.++.+|++++
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~--~v~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~d~   63 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSD--AVVVVDKLTYAGNL-MSLAPVA--------------QSERFAFEKVDICDR   63 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCC--EEEEEecCccccch-hhhhhcc--------------cCCceEEEECCCcCh
Confidence            368999999999999999999999874  24444443221111 1111100              013577889999986


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhc--------CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKM--------KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~S  152 (152)
                      +      ++.++++  ++|+|||+||....   ...+..++++|+.++.++++++.+.        .++++||++|
T Consensus        64 ~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~S  133 (355)
T PRK10217         64 A------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHIS  133 (355)
T ss_pred             H------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEec
Confidence            5      6777777  48999999997653   2345779999999999999999762        2456888876

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.67  E-value=1.8e-15  Score=117.73  Aligned_cols=131  Identities=18%  Similarity=0.173  Sum_probs=93.3

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +.+++++++||||+|+||++++++|++.|+   .|++++|+..  .+......+....    +.........++.++.+|
T Consensus        76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~---~Vval~Rn~e--kl~~l~~~l~~~~----L~~~Ga~~~~~v~iV~gD  146 (576)
T PLN03209         76 DTKDEDLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSAQ--RAESLVQSVKQMK----LDVEGTQPVEKLEIVECD  146 (576)
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCC---eEEEEeCCHH--HHHHHHHHhhhhc----cccccccccCceEEEEec
Confidence            456789999999999999999999999987   6777888643  1111111111000    000000012358899999


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.+.+      ++...++++|+|||++|.... ..++...+.+|+.++.++++++... ++++||++|
T Consensus       147 LtD~e------sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VS  207 (576)
T PLN03209        147 LEKPD------QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVT  207 (576)
T ss_pred             CCCHH------HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEc
Confidence            98854      688888999999999986532 1245567889999999999999987 688999986

>KOG1371|consensus

Probab=99.67  E-value=5e-16  Score=111.93  Aligned_cols=121  Identities=23%  Similarity=0.241  Sum_probs=94.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .++||||||+||||+|.+.+|++.|++|..|.-++|+-.  ....+++.+...             ...+.++.+|++|.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~--~sl~r~~~l~~~-------------~~~v~f~~~Dl~D~   66 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYL--ESLKRVRQLLGE-------------GKSVFFVEGDLNDA   66 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccch--hHHHHHHHhcCC-------------CCceEEEEeccCCH
Confidence            578999999999999999999999997766665555432  223333333211             47899999999996


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      .++++|+  +.|.|+|.|+....   .+++...++.|+.++.++++.+++. +++++|+.|
T Consensus        67 ~------~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~ss  127 (343)
T KOG1371|consen   67 E------ALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSS  127 (343)
T ss_pred             H------HHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEec
Confidence            6      5888887  68999999997664   2334558899999999999999998 589999876

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.66  E-value=2.2e-15  Score=105.12  Aligned_cols=125  Identities=16%  Similarity=0.151  Sum_probs=91.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++|.++||||++|||.++++.|.+.|+   +|++..|+.      ++|+++...         ..  ...+..+..|++
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~---~vvl~aRR~------drL~~la~~---------~~--~~~~~~~~~DVt   63 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGA---KVVLAARRE------ERLEALADE---------IG--AGAALALALDVT   63 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCC---eEEEEeccH------HHHHHHHHh---------hc--cCceEEEeeccC
Confidence            4568999999999999999999999997   889999863      344433221         01  046888999999


Q ss_pred             CCCCCCC-hhHHHHHhccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIK-DSDLLMLQEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      |++.-.. .+.+...+.++|++|||||...       ..++|+.++++|+.+..+..++..+.   ++..++|++|
T Consensus        64 D~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~  139 (246)
T COG4221          64 DRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLG  139 (246)
T ss_pred             CHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEec
Confidence            9751000 1223344457999999999754       26789999999999999999998652   2445777765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.66  E-value=2e-15  Score=121.19  Aligned_cols=123  Identities=22%  Similarity=0.351  Sum_probs=89.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .+.|+|+||||+||||++++++|++.|+++ +|++++|.....+. ..+...              ....++.++.+|++
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~-~V~~~d~~~~~~~~-~~l~~~--------------~~~~~v~~~~~Dl~   67 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDY-KIVVLDKLDYCSNL-KNLNPS--------------KSSPNFKFVKGDIA   67 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCC-EEEEEeCCCccchh-hhhhhc--------------ccCCCeEEEECCCC
Confidence            467899999999999999999999985543 67778764321111 111100              01246889999999


Q ss_pred             CCCCCCChhHHHHHh--ccccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ--EEVSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~--~~~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      .+...+  .++|+|||+|+.....   .+....+++|+.++.++++++...+.+++||++|
T Consensus        68 d~~------~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~S  131 (668)
T PLN02260         68 SAD------LVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS  131 (668)
T ss_pred             ChH------HHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Confidence            864      355444  5799999999986542   2345678999999999999999874478999987

>PLN02686 cinnamoyl-CoA reductase

Probab=99.66  E-value=9.4e-16  Score=115.25  Aligned_cols=127  Identities=17%  Similarity=0.254  Sum_probs=90.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+||||++++++|++.|+   .|+++.|+..  . .+.+..+....       ........+.++.+|+
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~---~V~~~~r~~~--~-~~~l~~l~~~~-------~~~~~~~~~~~v~~Dl  116 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY---SVRIAVDTQE--D-KEKLREMEMFG-------EMGRSNDGIWTVMANL  116 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHhhhc-------cccccCCceEEEEcCC
Confidence            46789999999999999999999999997   5666666432  1 11222111000       0000013578889999


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccchh---hHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKLEA---ELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++++      ++.++++++|++||+++..+...   ......+.|+.++.++++++.+..++++||++|
T Consensus       117 ~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~S  179 (367)
T PLN02686        117 TEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTS  179 (367)
T ss_pred             CCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEec
Confidence            9865      68888889999999998764322   224567889999999999998854688999987

>KOG1205|consensus

Probab=99.65  E-value=8.7e-16  Score=110.23  Aligned_cols=130  Identities=23%  Similarity=0.258  Sum_probs=90.5

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH-HHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      +.+.+|+++||||++|||.+++.+|++.|.   +++.+.|+..   ..+++ +++.+.         .+  ..++.++++
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~---~l~lvar~~r---rl~~v~~~l~~~---------~~--~~~v~~~~~   70 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGA---KLVLVARRAR---RLERVAEELRKL---------GS--LEKVLVLQL   70 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCC---ceEEeehhhh---hHHHHHHHHHHh---------CC--cCccEEEeC
Confidence            346889999999999999999999999985   5566665432   12333 222221         11  125999999


Q ss_pred             ccCCCCCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         85 DILQANLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        85 D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      |++|.+.... .++..+.+.++|++|||||+...       ..+.+.++++|+.|+..+.+++.+.   .+-+|+|.+|
T Consensus        71 Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvis  149 (282)
T KOG1205|consen   71 DVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVIS  149 (282)
T ss_pred             ccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEe
Confidence            9999652110 11223455689999999998652       4566779999999999999998753   2346888765

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.65  E-value=3.1e-15  Score=106.94  Aligned_cols=122  Identities=16%  Similarity=0.135  Sum_probs=88.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++.+|+..  ...+....+..             .+.++.++.+|+
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~i~~-------------~~~~~~~~~~D~   68 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGA---EVILNGRDPA--KLAAAAESLKG-------------QGLSAHALAFDV   68 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCceEEEEEccC
Confidence            36789999999999999999999999987   6777887532  11111111111             124578889999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++..++       .++|++||++|...       ..+.++..+++|+.++.++++++.+.   .+.+++|
T Consensus        69 ~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv  142 (255)
T PRK07523         69 TDHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKII  142 (255)
T ss_pred             CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEE
Confidence            9865      444444       35899999999753       24556778999999999999988753   2356888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       143 ~is  145 (255)
T PRK07523        143 NIA  145 (255)
T ss_pred             EEc
Confidence            875

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.65  E-value=2.2e-15  Score=113.37  Aligned_cols=113  Identities=16%  Similarity=0.079  Sum_probs=85.2

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++|+|+||||+|+||+++++.|.+.|+   .|.+++|..... .    .                .......++.+|+++
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~---~V~~v~r~~~~~-~----~----------------~~~~~~~~~~~Dl~d   75 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGH---YIIASDWKKNEH-M----S----------------EDMFCHEFHLVDLRV   75 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCC---EEEEEEeccccc-c----c----------------cccccceEEECCCCC
Confidence            568999999999999999999999987   677788753210 0    0                001124677899987


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ..      .+...+.++|+|||+|+....    ..+....+..|+.++.++++++.+. ++++|||+|
T Consensus        76 ~~------~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~S  136 (370)
T PLN02695         76 ME------NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYAS  136 (370)
T ss_pred             HH------HHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeC
Confidence            43      577777889999999986531    2234456788999999999999987 688999986

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.65  E-value=2.5e-15  Score=111.74  Aligned_cols=125  Identities=22%  Similarity=0.191  Sum_probs=88.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++++++||||+||||++++++|++.|+   .|++++|+..... .+.+..+..         .......++.++.+|++
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~---~V~~~~r~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~Dl~   70 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGY---EVHGIIRRSSNFN-TQRLDHIYI---------DPHPNKARMKLHYGDLS   70 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEEeccccccc-ccchhhhcc---------ccccccCceEEEEecCC
Confidence            4578999999999999999999999987   6777877643110 111111110         00001246889999999


Q ss_pred             CCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCc-----ceEecC
Q psy11862         88 QANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLV-----VSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~S  152 (152)
                      +.+      ++..+++  ++|+|||+|+....   ..++...+++|+.++.++++++.+. +++     +||++|
T Consensus        71 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~S  138 (340)
T PLN02653         71 DAS------SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAG  138 (340)
T ss_pred             CHH------HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEec
Confidence            855      5777766  47999999997543   2345567799999999999999886 443     788875

>PLN02240 UDP-glucose 4-epimerase

Probab=99.65  E-value=4.1e-15  Score=110.90  Aligned_cols=123  Identities=22%  Similarity=0.207  Sum_probs=89.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      |++++++||||+|++|.+++++|++.|+   .|++++|..... ...+++.....            ....++.++.+|+
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~D~   67 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGY---KVVVIDNLDNSSEEALRRVKELAG------------DLGDNLVFHKVDL   67 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCcchHHHHHHHHHhhc------------ccCccceEEecCc
Confidence            5678999999999999999999999986   667777653211 11111111100            0124578889999


Q ss_pred             CCCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++.      ++..+++  ++|+|||+|+....   ...+...++.|+.++.++++++.+. ++++||++|
T Consensus        68 ~~~~------~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S  131 (352)
T PLN02240         68 RDKE------ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSS  131 (352)
T ss_pred             CCHH------HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence            8854      5777665  68999999986532   3456678999999999999999886 678999886

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.65  E-value=3.7e-15  Score=106.73  Aligned_cols=122  Identities=20%  Similarity=0.161  Sum_probs=83.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||.++++.|+++|+   .|++++|++.  ...+....+..             ...++.++.+|+
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl   65 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGA---AVAIADLNQD--GANAVADEINK-------------AGGKAIGVAMDV   65 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEeCChH--HHHHHHHHHHh-------------cCceEEEEECCC
Confidence            36789999999999999999999999987   5677787643  12222222211             124677889999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHH----hcCCCcce
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIAL----KMKKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~  148 (152)
                      +++.      ++..++       .++|++||++|....       .+.++..+++|+.++..+.+.+.    +..+.+++
T Consensus        66 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~i  139 (262)
T PRK13394         66 TNED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVV  139 (262)
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEE
Confidence            9865      344333       358999999997532       34566788899999665554442    22256788


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       140 v~~s  143 (262)
T PRK13394        140 IYMG  143 (262)
T ss_pred             EEEc
Confidence            8876

>PRK06194 hypothetical protein; Provisional

Probab=99.65  E-value=4.9e-15  Score=107.61  Aligned_cols=121  Identities=16%  Similarity=0.114  Sum_probs=85.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..  ...+...++..             ...++.++.+|++
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   65 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGM---KLVLADVQQD--ALDRAVAELRA-------------QGAEVLGVRTDVS   65 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEeCChH--HHHHHHHHHHh-------------cCCeEEEEECCCC
Confidence            5678999999999999999999999986   6777787532  22222222211             1246788999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh----cCC-----
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK----MKK-----  144 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~----~~~-----  144 (152)
                      +++      ++.++++       ++|++||+||....       .+.+...+++|+.++.++++++.+    ...     
T Consensus        66 d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~  139 (287)
T PRK06194         66 DAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAY  139 (287)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            865      4555443       57999999997542       356677899999999998888643    211     


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      .+++|++|
T Consensus       140 ~g~iv~~s  147 (287)
T PRK06194        140 EGHIVNTA  147 (287)
T ss_pred             CeEEEEeC
Confidence            14788765

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5.7e-15  Score=105.87  Aligned_cols=125  Identities=16%  Similarity=0.154  Sum_probs=89.0

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||.++++.|+++|+   +|++++|+..  ...+....+...           ....++.++.+|
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~---~vv~~~r~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~D   66 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGA---AVALADLDAA--LAERAAAAIARD-----------VAGARVLAVPAD   66 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHhc-----------cCCceEEEEEcc
Confidence            347789999999999999999999999986   6778887533  222222222110           012467889999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++++      ++..++       .++|++||+||...       ..+.+...+++|+.++..+++++.+.   .+.+++
T Consensus        67 l~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~i  140 (260)
T PRK07063         67 VTDAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSI  140 (260)
T ss_pred             CCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEE
Confidence            99865      344333       47899999999643       14567788999999999999987642   234678


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       141 v~is  144 (260)
T PRK07063        141 VNIA  144 (260)
T ss_pred             EEEC
Confidence            8875

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.64  E-value=4.1e-15  Score=114.11  Aligned_cols=112  Identities=22%  Similarity=0.325  Sum_probs=82.3

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++|+|+||||+||||++++++|+++|+   .|++++|....  ..+.+....              ...++.++.+|+.+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~---~V~~ld~~~~~--~~~~~~~~~--------------~~~~~~~i~~D~~~  178 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGD---SVIVVDNFFTG--RKENVMHHF--------------SNPNFELIRHDVVE  178 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcC---EEEEEeCCCcc--chhhhhhhc--------------cCCceEEEECCccC
Confidence            568999999999999999999999987   56777764321  111111110              02467788888876


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.           +.++|+|||+|+....   ..+....+++|+.++.+++++|++. +. +||++|
T Consensus       179 ~~-----------l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~S  232 (442)
T PLN02206        179 PI-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTS  232 (442)
T ss_pred             hh-----------hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEEC
Confidence            42           2468999999986542   2356678899999999999999987 44 899886

>PRK06398 aldose dehydrogenase; Validated

Probab=99.64  E-value=5.6e-15  Score=105.98  Aligned_cols=110  Identities=15%  Similarity=0.225  Sum_probs=84.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+...                          ...+.++.+|++
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~---~Vi~~~r~~~~--------------------------~~~~~~~~~D~~   54 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGS---NVINFDIKEPS--------------------------YNDVDYFKVDVS   54 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCccc--------------------------cCceEEEEccCC
Confidence            6789999999999999999999999997   67788875431                          135778899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++||+||...       ..+++...+++|+.++..+++++.+.   .+.+++|+
T Consensus        55 ~~~------~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~  128 (258)
T PRK06398         55 NKE------QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIIN  128 (258)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence            865      343333       46899999999643       24567778999999999998888642   24468888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       129 is  130 (258)
T PRK06398        129 IA  130 (258)
T ss_pred             eC
Confidence            75

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.64  E-value=2.6e-15  Score=120.36  Aligned_cols=116  Identities=22%  Similarity=0.231  Sum_probs=87.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .-++|+|+||||+||||++++++|++. |+   .|++++|.....      .....              ..++.++.+|
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~---~V~~l~r~~~~~------~~~~~--------------~~~~~~~~gD  368 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNY---EVYGLDIGSDAI------SRFLG--------------HPRFHFVEGD  368 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCc---EEEEEeCCchhh------hhhcC--------------CCceEEEecc
Confidence            346789999999999999999999985 56   678888754210      00000              1468889999


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++++.     ..+.++++++|+|||+||....   ..+....+++|+.++.+++++|.+. + ++|||+|
T Consensus       369 l~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~S  431 (660)
T PRK08125        369 ISIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPS  431 (660)
T ss_pred             ccCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEc
Confidence            98853     1246677899999999997653   3345568899999999999999987 4 7899887

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.63  E-value=8.3e-15  Score=105.45  Aligned_cols=122  Identities=16%  Similarity=0.109  Sum_probs=87.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++.+|+..  .+.+..+++..            ....++.++.+|++
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dv~   68 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGA---DVILLSRNEE--NLKKAREKIKS------------ESNVDVSYIVADLT   68 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh------------hcCCceEEEEecCC
Confidence            6789999999999999999999999997   6777787532  11111111111            01246888999999


Q ss_pred             CCCCCCChhHHHHHh------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQ------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      ++.+++      .++|++||++|...       ..+.|+..+++|+.++..+.+++.+.   .+.+++|++
T Consensus        69 ~~~------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~i  142 (263)
T PRK08339         69 KRE------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYS  142 (263)
T ss_pred             CHH------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence            865      344433      36899999998643       14678889999999998888777542   234678887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       143 s  143 (263)
T PRK08339        143 T  143 (263)
T ss_pred             c
Confidence            5

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.63  E-value=7.2e-15  Score=106.42  Aligned_cols=117  Identities=18%  Similarity=0.182  Sum_probs=85.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++++||||+|+||++++++|++.|+   +|++++|+..      .+..+..            ....++.++.+|+++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~------~~~~l~~------------~~~~~~~~~~~D~~d   61 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH---RVVGTVRSEA------ARADFEA------------LHPDRALARLLDVTD   61 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC---EEEEEeCCHH------HHHHHHh------------hcCCCeeEEEccCCC
Confidence            468899999999999999999999986   6788888542      1221111            012467888999998


Q ss_pred             CCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEec
Q psy11862         89 ANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDI  151 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~  151 (152)
                      ++      ++.+.++       ++|++||+||....       .+.++..+++|+.++.++++++.+   ..+.+++|++
T Consensus        62 ~~------~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i  135 (277)
T PRK06180         62 FD------AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNI  135 (277)
T ss_pred             HH------HHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEE
Confidence            65      3444433       68999999997542       355677899999999999998754   2245678887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       136 S  136 (277)
T PRK06180        136 T  136 (277)
T ss_pred             e
Confidence            5

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.62  E-value=3.9e-15  Score=112.73  Aligned_cols=120  Identities=24%  Similarity=0.305  Sum_probs=87.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++++++||||+|+||++++++|+++|+   .|++++|+..............             ....++.++.+|++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~-------------~~~~~v~~v~~Dl~  121 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGY---NVVAVAREKSGIRGKNGKEDTK-------------KELPGAEVVFGDVT  121 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEEechhhccccchhhHHh-------------hhcCCceEEEeeCC
Confidence            4678999999999999999999999987   6788888654211000000000             01246889999999


Q ss_pred             CCCCCCChhHHHHHhc----cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE----EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      |++      ++.+.++    ++|+||||++....  ...+.+++|+.++.++++++.+. ++++||++|
T Consensus       122 d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iS  181 (390)
T PLN02657        122 DAD------SLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLS  181 (390)
T ss_pred             CHH------HHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence            965      5777776    58999999875321  12345678999999999999987 688999986

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.62  E-value=7.5e-15  Score=107.75  Aligned_cols=123  Identities=16%  Similarity=0.159  Sum_probs=84.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|+++|+   +|++++|+..  ...+...++..         .  ....++.++.+|++
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~---~vi~~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~~~~Dl~   77 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGA---HVVLAVRNLD--KGKAAAARITA---------A--TPGADVTLQELDLT   77 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH---------h--CCCCceEEEECCCC
Confidence            6789999999999999999999999986   6778887532  11221222111         0  01246788999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +.+      ++.+++       .++|++|||||....     .+.+...+++|+.++..+.+.+.+.   .+.+++|++|
T Consensus        78 d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vS  151 (306)
T PRK06197         78 SLA------SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVS  151 (306)
T ss_pred             CHH------HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEEC
Confidence            865      344433       368999999996532     3456678899999977766665432   1346888876

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.62  E-value=8.9e-15  Score=104.80  Aligned_cols=123  Identities=14%  Similarity=0.133  Sum_probs=85.4

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      ...+++++++||||+|+||++++++|+++|+   +|++++|+..   ..+...++..             ...++.++.+
T Consensus         3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~---~v~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~   63 (260)
T PRK12823          3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGA---RVVLVDRSEL---VHEVAAELRA-------------AGGEALALTA   63 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCchH---HHHHHHHHHh-------------cCCeEEEEEE
Confidence            3457889999999999999999999999986   6777787532   1111122111             1246778899


Q ss_pred             ccCCCCCCCChhHHHHH-------hccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCc
Q psy11862         85 DILQANLGIKDSDLLML-------QEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLV  146 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~  146 (152)
                      |+++++      ++.++       +.++|++|||||...        ....+...+++|+.++..+++.+.+.   .+.+
T Consensus        64 D~~~~~------~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g  137 (260)
T PRK12823         64 DLETYA------GAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGG  137 (260)
T ss_pred             eCCCHH------HHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence            999854      33333       346899999998531        14556778899999998877766531   2446


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       138 ~iv~~s  143 (260)
T PRK12823        138 AIVNVS  143 (260)
T ss_pred             eEEEEc
Confidence            788876

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.62  E-value=1.3e-14  Score=111.28  Aligned_cols=112  Identities=23%  Similarity=0.330  Sum_probs=82.0

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +.|+|+||||+||||++++++|++.|+   .|++++|.....  .+.+.....              ..++.++.+|+.+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~---~V~~ldr~~~~~--~~~~~~~~~--------------~~~~~~~~~Di~~  179 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGD---EVIVIDNFFTGR--KENLVHLFG--------------NPRFELIRHDVVE  179 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCCCcc--HhHhhhhcc--------------CCceEEEECcccc
Confidence            457999999999999999999999987   667777753211  111111100              1357788888866


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.           +.++|+|||+|+....   ..+....++.|+.++.+++++|.+. +. +||++|
T Consensus       180 ~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~S  233 (436)
T PLN02166        180 PI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTS  233 (436)
T ss_pred             cc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEEC
Confidence            42           2478999999986542   2456678999999999999999987 44 798886

>PRK06128 oxidoreductase; Provisional

Probab=99.62  E-value=1.4e-14  Score=106.04  Aligned_cols=123  Identities=13%  Similarity=0.135  Sum_probs=85.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|++.|+   .|++..++.......+....+..             ...++.++.+|++
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~---~V~i~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~Dl~  116 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGA---DIALNYLPEEEQDAAEVVQLIQA-------------EGRKAVALPGDLK  116 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCC---EEEEEeCCcchHHHHHHHHHHHH-------------cCCeEEEEecCCC
Confidence            6679999999999999999999999987   45555544322122221111111             1346788999999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~  151 (152)
                      +++      ++.++       +.++|++|||||...        ..+.+...+++|+.++.++++++.+. ..-.++|++
T Consensus       117 ~~~------~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~  190 (300)
T PRK06128        117 DEA------FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINT  190 (300)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEE
Confidence            864      34333       347899999999642        14567889999999999999999763 122478876


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       191 s  191 (300)
T PRK06128        191 G  191 (300)
T ss_pred             C
Confidence            5

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.1e-14  Score=105.44  Aligned_cols=121  Identities=16%  Similarity=0.181  Sum_probs=86.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|++.|+   +|++.+|+..  .+.+...++..             ...++.++.+|++
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~---~Vv~~~r~~~--~l~~~~~~l~~-------------~~~~~~~~~~Dv~   65 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGA---RVVLGDVDKP--GLRQAVNHLRA-------------EGFDVHGVMCDVR   65 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEeCCCC
Confidence            6789999999999999999999999986   5677777532  22222222211             1246778899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v  149 (152)
                      +++      ++.+++       .++|++||+||...       ..+.++..+++|+.++.++++++.+    .+..+++|
T Consensus        66 d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv  139 (275)
T PRK05876         66 HRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVV  139 (275)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            865      444443       36899999999643       1456777899999999999998863    21245788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       140 ~is  142 (275)
T PRK05876        140 FTA  142 (275)
T ss_pred             EeC
Confidence            775

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.62  E-value=1.5e-14  Score=103.32  Aligned_cols=121  Identities=16%  Similarity=0.200  Sum_probs=86.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   .|++.+|+..  ...+...++..             ...++..+.+|++
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~---~vvl~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl~   68 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGA---EIIINDITAE--RAELAVAKLRQ-------------EGIKAHAAPFNVT   68 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEcCCHH--HHHHHHHHHHh-------------cCCeEEEEecCCC
Confidence            6789999999999999999999999986   6777777532  11222222111             1245778899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++..++       .++|++||++|...       ..+.++..+++|+.++..+++++.+.   .+.+++|+
T Consensus        69 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  142 (254)
T PRK08085         69 HKQ------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIIN  142 (254)
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            865      344433       36899999999643       24667789999999999998887652   23467887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       143 is  144 (254)
T PRK08085        143 IC  144 (254)
T ss_pred             Ec
Confidence            75

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.61  E-value=1.5e-14  Score=107.35  Aligned_cols=118  Identities=23%  Similarity=0.230  Sum_probs=84.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|++.|+   .|++++|.....  ...+..+..         .   ...++.++.+|+++++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~~~~~~~--~~~~~~~~~---------~---~~~~~~~~~~Dl~d~~   63 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGH---DVVILDNLCNSK--RSVLPVIER---------L---GGKHPTFVEGDIRNEA   63 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCC---eEEEEecCCCch--HhHHHHHHH---------h---cCCCceEEEccCCCHH
Confidence            4799999999999999999999987   556666542211  111111100         0   0134677889998854


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            .+.+++.  ++|+|||+|+....   .....+.+++|+.++.++++++.+. ++++||++|
T Consensus        64 ------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S  123 (338)
T PRK10675         64 ------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSS  123 (338)
T ss_pred             ------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence                  5666665  68999999987542   2345568899999999999999987 678999876

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.61  E-value=1.5e-14  Score=102.75  Aligned_cols=121  Identities=17%  Similarity=0.145  Sum_probs=87.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|++|.+++++|+++|+   +|++++|+..  ...+....+...             ...+.++.+|++
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~---~V~~~~r~~~--~~~~~~~~l~~~-------------~~~~~~~~~Dl~   65 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGA---EVIVVDICGD--DAAATAELVEAA-------------GGKARARQVDVR   65 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHhc-------------CCeEEEEECCCC
Confidence            4678999999999999999999999986   6788888643  222222222111             245888999998


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~  150 (152)
                      +++      ++.+.++       ++|++||++|....       .+++...++.|+.++.++++++.+   ..+.++||+
T Consensus        66 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~  139 (251)
T PRK12826         66 DRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVL  139 (251)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            854      4555443       68999999987542       456677899999999999988753   124567887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       140 ~s  141 (251)
T PRK12826        140 TS  141 (251)
T ss_pred             Ee
Confidence            65

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.6e-14  Score=103.82  Aligned_cols=121  Identities=15%  Similarity=0.187  Sum_probs=86.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.++++.|+++|+   +|++++|+..  ...+....+..             ...++.++.+|++
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~---~Vi~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~D~~   69 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGA---DVLIAARTES--QLDEVAEQIRA-------------AGRRAHVVAADLA   69 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence            6789999999999999999999999986   6788888532  11111111111             1246788899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v  149 (152)
                      +++      ++.+++       .++|++||+||...       ..+.+...+++|+.++.++.+++.+.    .+.+++|
T Consensus        70 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv  143 (263)
T PRK07814         70 HPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVI  143 (263)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEE
Confidence            854      344333       47899999998532       13567778999999999999998642    2446788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       144 ~~s  146 (263)
T PRK07814        144 NIS  146 (263)
T ss_pred             EEc
Confidence            765

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.61  E-value=1.7e-14  Score=102.20  Aligned_cols=122  Identities=19%  Similarity=0.221  Sum_probs=87.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++|||++|++|.+++++|+++|+   .|++++|+..  ...+...++..             ...++.++.+|+
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~---~Vi~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~   65 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGV---NVGLLARTEE--NLKAVAEEVEA-------------YGVKVVIATADV   65 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH-------------hCCeEEEEECCC
Confidence            35678999999999999999999999986   6788888643  11221222111             125788899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++..++       .++|++||++|....       .++++..+++|+.++.++++++.+.   .+.+++|
T Consensus        66 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv  139 (239)
T PRK07666         66 SDYE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDII  139 (239)
T ss_pred             CCHH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEE
Confidence            8854      444444       378999999986431       3556778999999999999888642   2446777


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       140 ~~s  142 (239)
T PRK07666        140 NIS  142 (239)
T ss_pred             EEc
Confidence            765

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.61  E-value=7.3e-15  Score=108.28  Aligned_cols=111  Identities=30%  Similarity=0.403  Sum_probs=88.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|++|+++++.|++.|+   .|++++|+.....      .+               ...++.++.+|+.+..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~------~~---------------~~~~~~~~~~D~~~~~   56 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGE---EVRVLVRPTSDRR------NL---------------EGLDVEIVEGDLRDPA   56 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCC---EEEEEEecCcccc------cc---------------ccCCceEEEeeCCCHH
Confidence            4799999999999999999999986   6788888643210      00               0135778899998854


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++.+.++++|+|||+|+.... ..++...++.|+.++.++++++.+. +++++|++|
T Consensus        57 ------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S  112 (328)
T TIGR03466        57 ------SLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTS  112 (328)
T ss_pred             ------HHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence                  688888899999999986432 3456778999999999999999986 678999876

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.61  E-value=7.1e-15  Score=98.63  Aligned_cols=120  Identities=21%  Similarity=0.266  Sum_probs=88.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+++||.+++++|+++|.  ..|+++.|+.......+...++..             ...++.++.+|+++++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~~~~~~~~~l~~~l~~-------------~~~~~~~~~~D~~~~~   65 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGA--RVVILTSRSEDSEGAQELIQELKA-------------PGAKITFIECDLSDPE   65 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESSCHHHHHHHHHHHHHH-------------TTSEEEEEESETTSHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeecccccccccccccccc-------------cccccccccccccccc
Confidence            5899999999999999999999954  477888876111111222222221             1378899999999865


Q ss_pred             CCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++.+++       ..+|++|||+|...       ..+.++.++++|+.++..+.+++.+. +.+++|++|
T Consensus        66 ------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~~s  134 (167)
T PF00106_consen   66 ------SIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVNIS  134 (167)
T ss_dssp             ------HHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEEEE
T ss_pred             ------cccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEEec
Confidence                  344443       37899999999765       25677889999999999999999883 567888765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.8e-14  Score=102.88  Aligned_cols=121  Identities=17%  Similarity=0.168  Sum_probs=85.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|++.|+   +|++++|++.  +..+...++..             ...++.++.+|++
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   65 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGA---KVVVGARRQA--ELDQLVAEIRA-------------EGGEAVALAGDVR   65 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence            5678999999999999999999999986   6788888643  22221122111             1246788999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      ++.+++       .++|++||+||....        .+.++..+++|+.+++.+.+++.+.   .+.+++|
T Consensus        66 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv  139 (254)
T PRK07478         66 DEA------YAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLI  139 (254)
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEE
Confidence            865      344333       378999999996421        3557778999999999888776542   2345787


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       140 ~~s  142 (254)
T PRK07478        140 FTS  142 (254)
T ss_pred             EEe
Confidence            765

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.1e-14  Score=103.87  Aligned_cols=128  Identities=16%  Similarity=0.159  Sum_probs=88.9

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |+.....+.+++++||||+|+||++++++|+++|+   +|++.+|+..  ...+....+..             ...++.
T Consensus         1 ~~~~~~~~~~~~vlVtGa~g~iG~~la~~L~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~   62 (274)
T PRK07775          1 MPRFEPHPDRRPALVAGASSGIGAATAIELAAAGF---PVALGARRVE--KCEELVDKIRA-------------DGGEAV   62 (274)
T ss_pred             CCCCCCCCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEE
Confidence            45555566788999999999999999999999986   5677777532  11111111110             124677


Q ss_pred             EEEcccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---C
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---K  143 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~  143 (152)
                      ++.+|+++++      ++.+++       .++|++||+||....       .+.+...+++|+.++.++.+++.+.   .
T Consensus        63 ~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~  136 (274)
T PRK07775         63 AFPLDVTDPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER  136 (274)
T ss_pred             EEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            8899999865      444443       367999999997532       3456677899999999998887532   2


Q ss_pred             CCcceEecC
Q psy11862        144 KLVVSLDIG  152 (152)
Q Consensus       144 ~~~~~v~~S  152 (152)
                      +..+||++|
T Consensus       137 ~~g~iv~is  145 (274)
T PRK07775        137 RRGDLIFVG  145 (274)
T ss_pred             CCceEEEEC
Confidence            345788775

>PRK06182 short chain dehydrogenase; Validated

Probab=99.61  E-value=2.1e-14  Score=103.74  Aligned_cols=115  Identities=19%  Similarity=0.262  Sum_probs=83.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++|||++|+||++++++|++.|+   +|++++|+..      .++++..               .++.++.+|++
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~------~l~~~~~---------------~~~~~~~~Dv~   56 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGY---TVYGAARRVD------KMEDLAS---------------LGVHPLSLDVT   56 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHh---------------CCCeEEEeeCC
Confidence            3578999999999999999999999986   6788887532      2222211               24778899999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++||+||....       .+.++..+++|+.++..+++.+.+.   .+.+++|+
T Consensus        57 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~  130 (273)
T PRK06182         57 DEA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIIN  130 (273)
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            865      4554443       78999999997542       3567778999999987777665431   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       131 is  132 (273)
T PRK06182        131 IS  132 (273)
T ss_pred             Ec
Confidence            76

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.4e-14  Score=103.36  Aligned_cols=121  Identities=22%  Similarity=0.306  Sum_probs=83.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEE-eecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYI-LCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++|||++|+||.+++++|+++|+   +|++ ..|+..  ...+..+.+..             ....+.++.+|+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~---~v~i~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~   65 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGA---LVAIHYGRNKQ--AADETIREIES-------------NGGKAFLIEADL   65 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCc
Confidence            5678999999999999999999999986   4444 345321  12222222111             124678899999


Q ss_pred             CCCCCCCChhHHHHHhc-------------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCC
Q psy11862         87 LQANLGIKDSDLLMLQE-------------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKL  145 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~  145 (152)
                      ++++      ++.+.++             ++|++||+||....       ...++..+++|+.++.++++++.+. .+.
T Consensus        66 ~d~~------~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  139 (254)
T PRK12746         66 NSID------GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE  139 (254)
T ss_pred             CCHH------HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence            9865      4444333             58999999987432       3345668899999999999998763 123


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      +++|++|
T Consensus       140 ~~~v~~s  146 (254)
T PRK12746        140 GRVINIS  146 (254)
T ss_pred             CEEEEEC
Confidence            5788775

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.61  E-value=1.1e-14  Score=108.59  Aligned_cols=119  Identities=24%  Similarity=0.274  Sum_probs=83.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|++.|++  .++.+++...... .+.+..+.              ...++.++.+|++|.+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~Dl~d~~   63 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQD--SVVNVDKLTYAGN-LESLADVS--------------DSERYVFEHADICDRA   63 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCC--eEEEecCCCccch-HHHHHhcc--------------cCCceEEEEecCCCHH
Confidence            47999999999999999999999863  3444444321111 11111110              0145778899999854


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhc--------CCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKM--------KKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~S  152 (152)
                            ++.++++  ++|+|||+||....   ......++++|+.++.+++++|.+.        .++++||++|
T Consensus        64 ------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~S  132 (352)
T PRK10084         64 ------ELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHIS  132 (352)
T ss_pred             ------HHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEec
Confidence                  6777776  58999999997543   2345678999999999999999863        1356888876

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.6e-14  Score=103.90  Aligned_cols=127  Identities=20%  Similarity=0.235  Sum_probs=88.9

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |++|.+ +++++++||||+|+||.++++.|++.|+   .|++++|+..  .+.+....+..             ...++.
T Consensus         1 ~~~~~~-~~~k~ilItGasggIG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~   61 (264)
T PRK07576          1 MTTMFD-FAGKNVVVVGGTSGINLGIAQAFARAGA---NVAVASRSQE--KVDAAVAQLQQ-------------AGPEGL   61 (264)
T ss_pred             CCcccc-CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH-------------hCCceE
Confidence            566765 6889999999999999999999999986   6788887643  11111111111             124567


Q ss_pred             EEEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CC
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KK  144 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~  144 (152)
                      ++.+|+++++      ++.+++       .++|++||+||...       ..+++...+++|+.++.++++++.+.  ..
T Consensus        62 ~~~~Dv~~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~  135 (264)
T PRK07576         62 GVSADVRDYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP  135 (264)
T ss_pred             EEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence            8899998854      344433       35799999997532       14567778999999999999988652  12


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      .++++++|
T Consensus       136 ~g~iv~is  143 (264)
T PRK07576        136 GASIIQIS  143 (264)
T ss_pred             CCEEEEEC
Confidence            25777765

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.60  E-value=2.1e-14  Score=102.57  Aligned_cols=121  Identities=17%  Similarity=0.142  Sum_probs=86.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|++|.+++++|+++|+   +|++++|++.  ...+...++..             ...++.++.+|++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~   63 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGA---KVVIADLNDE--AAAAAAEALQK-------------AGGKAIGVAMDVT   63 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence            4678999999999999999999999987   6788888643  11221122111             1356888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++||++|....       ...+...+++|+.++.++++.+.+.   .+.++||+
T Consensus        64 ~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  137 (258)
T PRK12429         64 DEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIIN  137 (258)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEE
Confidence            865      444443       368999999986432       3456668889999988887776532   24678988


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       138 is  139 (258)
T PRK12429        138 MA  139 (258)
T ss_pred             Ec
Confidence            76

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.60  E-value=1.4e-14  Score=103.57  Aligned_cols=119  Identities=15%  Similarity=0.213  Sum_probs=85.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+++||++++++|++.|+   +|++.+|+..    .+....+..             ...++.++.+|++
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~---~vv~~~~~~~----~~~~~~~~~-------------~~~~~~~~~~Dl~   65 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGA---DIVGVGVAEA----PETQAQVEA-------------LGRKFHFITADLI   65 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCchH----HHHHHHHHH-------------cCCeEEEEEeCCC
Confidence            6789999999999999999999999997   5666666421    111111110             1256788999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-LVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v  149 (152)
                      +++      ++.+++       .++|++|||||...       ..+.|+..+++|+.+++.+.+++.+.   ++ ..++|
T Consensus        66 ~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii  139 (251)
T PRK12481         66 QQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKII  139 (251)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            965      444443       46899999999643       14678889999999999998887542   12 35788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       140 ~is  142 (251)
T PRK12481        140 NIA  142 (251)
T ss_pred             EeC
Confidence            775

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.60  E-value=6.4e-15  Score=107.92  Aligned_cols=98  Identities=17%  Similarity=0.139  Sum_probs=76.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+||||||+||||++++++|++.| +   |++++|...                                .+.+|++|++
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~---V~~~~~~~~--------------------------------~~~~Dl~d~~   44 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-N---LIALDVHST--------------------------------DYCGDFSNPE   44 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-C---EEEeccccc--------------------------------cccCCCCCHH
Confidence            479999999999999999999987 2   566665311                                1357988854


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            .+.++++  ++|+|||+|+.....   .+....+.+|+.++.+++++|.+. +. ++|++|
T Consensus        45 ------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~S  103 (299)
T PRK09987         45 ------GVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYS  103 (299)
T ss_pred             ------HHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEc
Confidence                  5777776  589999999986542   345567889999999999999987 44 788876

>PLN02253 xanthoxin dehydrogenase

Probab=99.60  E-value=2.2e-14  Score=103.87  Aligned_cols=121  Identities=16%  Similarity=0.169  Sum_probs=85.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+....+             . ...++.++.+|+
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~---~v~~~~~~~~--~~~~~~~~~-------------~-~~~~~~~~~~Dl   75 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGA---KVCIVDLQDD--LGQNVCDSL-------------G-GEPNVCFFHCDV   75 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHh-------------c-CCCceEEEEeec
Confidence            46789999999999999999999999986   6677776432  111111111             0 124688999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKM---KKLVV  147 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~  147 (152)
                      ++++      ++.+++       .++|++||+||....         .++++..+++|+.++.++++++.+.   ...++
T Consensus        76 ~d~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  149 (280)
T PLN02253         76 TVED------DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGS  149 (280)
T ss_pred             CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCce
Confidence            9865      444443       368999999996431         3567789999999999998887642   12346


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      ++++|
T Consensus       150 ii~is  154 (280)
T PLN02253        150 IVSLC  154 (280)
T ss_pred             EEEec
Confidence            66654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.60  E-value=2.4e-14  Score=102.55  Aligned_cols=121  Identities=20%  Similarity=0.220  Sum_probs=86.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.++++.|+++|+   +|+.++|+..  ...+....+..             ...++.++.+|++
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~i~~-------------~~~~~~~~~~Dl~   71 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGA---RVVLSARKAE--ELEEAAAHLEA-------------LGIDALWIAADVA   71 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEccCC
Confidence            5679999999999999999999999986   6777777532  11111111111             1246778999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v  149 (152)
                      +++      ++.+++       .++|++||++|...       ..+.+...+++|+.++.++++++.+.    ++.++||
T Consensus        72 d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v  145 (259)
T PRK08213         72 DEA------DIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRII  145 (259)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEE
Confidence            865      343333       36899999998642       24566778999999999999987543    2456888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       146 ~~s  148 (259)
T PRK08213        146 NVA  148 (259)
T ss_pred             EEC
Confidence            875

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.60  E-value=2.4e-14  Score=106.20  Aligned_cols=121  Identities=17%  Similarity=0.212  Sum_probs=86.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..  .+.+...++..             ...++.++.+|++
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~---~Vvl~~R~~~--~l~~~~~~~~~-------------~g~~~~~~~~Dv~   66 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGA---RLVLAARDEE--ALQAVAEECRA-------------LGAEVLVVPTDVT   66 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEeeCC
Confidence            6789999999999999999999999986   6778888542  12222222211             1356778899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      |++      ++.+++       .++|++|||||....       .+.++..+++|+.++.++.+++.+.   .+..++|+
T Consensus        67 d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~  140 (330)
T PRK06139         67 DAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFIN  140 (330)
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            865      454443       478999999996432       3567778999999999988887531   23357776


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       141 is  142 (330)
T PRK06139        141 MI  142 (330)
T ss_pred             Ec
Confidence            64

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.5e-14  Score=104.60  Aligned_cols=116  Identities=17%  Similarity=0.269  Sum_probs=84.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .++++||||+|+||++++++|++.|+   +|+++.|+..      .+..+..            ....++.++.+|++++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~---~v~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~~~   60 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGD---RVAATVRRPD------ALDDLKA------------RYGDRLWVLQLDVTDS   60 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH------------hccCceEEEEccCCCH
Confidence            36899999999999999999999986   6777777532      2222211            0124678899999986


Q ss_pred             CCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S  152 (152)
                      +      ++.+.+       .++|++||+||....       .+.+...+++|+.++.++++++.+   ..+.++||++|
T Consensus        61 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s  134 (276)
T PRK06482         61 A------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVS  134 (276)
T ss_pred             H------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence            5      344333       468999999997542       345667899999999999999843   22457888876

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.60  E-value=2.2e-14  Score=122.82  Aligned_cols=136  Identities=25%  Similarity=0.297  Sum_probs=104.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhc-ChhhhhhhhhccccCCcEEEEEcccC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSK-LPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++|+|||++|++|.++++.|++.+ ....+|+++.|........+++..... .+.      +......++.++.+|++
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~------~~~~~~~~i~~~~gDl~ 1044 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI------WDEEWASRIEVVLGDLS 1044 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC------CchhhhcceEEEeccCC
Confidence            4789999999999999999999886 122489999997654333344432211 110      01111247889999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++.+++..+.+..+..++|+|||+|+..++..++..+...|+.++.++++++... +.++|+|+|
T Consensus      1045 ~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vS 1108 (1389)
T TIGR03443      1045 KEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVS 1108 (1389)
T ss_pred             CccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEe
Confidence            9999999888888888999999999988876777777788999999999999886 678899886

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1430|consensus

Probab=99.60  E-value=1e-14  Score=107.99  Aligned_cols=121  Identities=26%  Similarity=0.337  Sum_probs=92.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++.+++||||+||+|.+++.+|++.+. ...+.+++..+......+.....               ....++++.+|+.
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~~~~~~~e~~~~---------------~~~~v~~~~~D~~   65 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPTQSNLPAELTGF---------------RSGRVTVILGDLL   65 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCccccccchhhhcc---------------cCCceeEEecchh
Confidence            3567999999999999999999999974 24777777655321111111110               1368899999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +..      ++...+.++ .|+|+|+....   ....+..+++|+.+|.+++++|.+. +++++||+|
T Consensus        66 ~~~------~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtS  125 (361)
T KOG1430|consen   66 DAN------SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTS  125 (361)
T ss_pred             hhh------hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEec
Confidence            866      588999999 78888775432   3346778999999999999999998 899999987

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.8e-14  Score=103.76  Aligned_cols=112  Identities=21%  Similarity=0.241  Sum_probs=85.0

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++++++||||+|+||++++++|+++|+   +|++.+|+....      .                 ...++.++.+|++|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~---~V~~~~r~~~~~------~-----------------~~~~~~~~~~D~~d   56 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGY---RVFGTSRNPARA------A-----------------PIPGVELLELDVTD   56 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCChhhc------c-----------------ccCCCeeEEeecCC
Confidence            467899999999999999999999986   678888864311      0                 02457789999998


Q ss_pred             CCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEec
Q psy11862         89 ANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDI  151 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~  151 (152)
                      ++      ++.++++       ++|++|||||....       .+.+..++++|+.++.++++++.+   ..+.+++|++
T Consensus        57 ~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~i  130 (270)
T PRK06179         57 DA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINI  130 (270)
T ss_pred             HH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence            65      4555544       57999999997532       456777999999999999888643   1256788887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       131 s  131 (270)
T PRK06179        131 S  131 (270)
T ss_pred             C
Confidence            6

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.60  E-value=3e-14  Score=101.41  Aligned_cols=121  Identities=14%  Similarity=0.121  Sum_probs=85.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|++.|+   +|++++|+..  ...+..+.+..             ....+.++.+|++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~vi~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~   65 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGA---SVVVADINAE--GAERVAKQIVA-------------DGGTAIAVQVDVS   65 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence            4678999999999999999999999986   6788888643  11111111111             0235678899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc----------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK----------LEAELKENVAANTRGTQRLLDIALKM---KKLVV  147 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~  147 (152)
                      +.+      ++..++       .++|+|||++|...          ....+...+++|+.++.++++++.+.   .+.++
T Consensus        66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  139 (250)
T PRK07774         66 DPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGA  139 (250)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcE
Confidence            865      343333       46899999999642          13456678999999999999998753   13457


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       140 iv~~s  144 (250)
T PRK07774        140 IVNQS  144 (250)
T ss_pred             EEEEe
Confidence            88765

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.9e-14  Score=104.20  Aligned_cols=121  Identities=15%  Similarity=0.175  Sum_probs=85.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.++++.|+++|+   +|++++|+..  .+.+..+.+..             ...++.++.+|++
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~---~Vi~~~R~~~--~l~~~~~~l~~-------------~~~~~~~~~~Dl~   99 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGA---TVVAVARRED--LLDAVADRITR-------------AGGDAMAVPCDLS   99 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence            5678999999999999999999999986   6788888632  11111111111             1245778899999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcce
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALK---MKKLVVS  148 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~  148 (152)
                      +++      ++.++++       ++|++|||||....         .+.+...+++|+.++.++++++.+   ..+.+++
T Consensus       100 d~~------~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i  173 (293)
T PRK05866        100 DLD------AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHI  173 (293)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence            865      3444443       78999999997532         234566899999999999887653   1245688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       174 v~is  177 (293)
T PRK05866        174 INVA  177 (293)
T ss_pred             EEEC
Confidence            8775

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.59  E-value=3.4e-14  Score=101.59  Aligned_cols=122  Identities=15%  Similarity=0.118  Sum_probs=86.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+... ...+..+.+..             ...++.++.+|++
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~---~v~~~~r~~~~-~~~~~~~~l~~-------------~~~~~~~~~~D~~   68 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGA---DVALFDLRTDD-GLAETAEHIEA-------------AGRRAIQIAADVT   68 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCcch-HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence            6789999999999999999999999986   67778875431 11222222211             1246778899999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++       +.++|++|||||....       .++++..+++|+.+++.+++++.+.   .+.+++|+
T Consensus        69 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  142 (254)
T PRK06114         69 SKA------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVN  142 (254)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEE
Confidence            865      34333       3467999999997532       4667888999999999988887542   23457777


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       143 is  144 (254)
T PRK06114        143 IA  144 (254)
T ss_pred             EC
Confidence            64

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.59  E-value=1.5e-14  Score=105.90  Aligned_cols=109  Identities=30%  Similarity=0.354  Sum_probs=84.9

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      .|+||||+||||++++++|++.|+   .|+.++|........                      ...+.++.+|+.+.. 
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~---~V~~~~r~~~~~~~~----------------------~~~~~~~~~d~~~~~-   55 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGH---DVRGLDRLRDGLDPL----------------------LSGVEFVVLDLTDRD-   55 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCC---eEEEEeCCCcccccc----------------------ccccceeeecccchH-
Confidence            499999999999999999999987   678888765422100                      035677888988864 


Q ss_pred             CCChhHHHHHhccc-cEEEeccccccchhh----HHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         92 GIKDSDLLMLQEEV-SVVFNGAASLKLEAE----LKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        92 ~~~~~~~~~~~~~~-d~vi~~a~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                           .+....+.. |+|||+|+.......    +...+.+|+.++.++++++... ++++||+.|
T Consensus        56 -----~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~s  115 (314)
T COG0451          56 -----LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFAS  115 (314)
T ss_pred             -----HHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeC
Confidence                 466666666 999999998764332    3458999999999999999995 788999865

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.59  E-value=2.3e-14  Score=102.70  Aligned_cols=120  Identities=13%  Similarity=0.217  Sum_probs=85.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.++++.|++.|+   .|+++.|+..    .+.+.+...            ....++.++.+|++
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~~~~~----~~~~~~~~~------------~~~~~~~~~~~D~~   73 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGA---DIIITTHGTN----WDETRRLIE------------KEGRKVTFVQVDLT   73 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCcH----HHHHHHHHH------------hcCCceEEEEcCCC
Confidence            5789999999999999999999999986   6677777521    122222111            01246888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +.+      ++..++       .++|++||++|...       ..+.++..+++|+.++..+.+++.+.   .+.+++|+
T Consensus        74 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~  147 (258)
T PRK06935         74 KPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIIN  147 (258)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEE
Confidence            855      344443       36899999999643       14567778999999999888887642   23467887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       148 is  149 (258)
T PRK06935        148 IA  149 (258)
T ss_pred             EC
Confidence            75

>PRK05717 oxidoreductase; Validated

Probab=99.59  E-value=2.8e-14  Score=102.05  Aligned_cols=125  Identities=15%  Similarity=0.050  Sum_probs=84.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+..+.                ....+.++.+|+
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~---~v~~~~~~~~--~~~~~~~~----------------~~~~~~~~~~Dl   65 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGW---QVVLADLDRE--RGSKVAKA----------------LGENAWFIAMDV   65 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCC---EEEEEcCCHH--HHHHHHHH----------------cCCceEEEEccC
Confidence            46789999999999999999999999986   6777776432  11111111                024677899999


Q ss_pred             CCCCCCCC-hhHHHHHhccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         87 LQANLGIK-DSDLLMLQEEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      ++++.-.. .+++.+.+.++|++||+||....         .+.+...+++|+.++.++++++.+.  ...+++|++|
T Consensus        66 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~s  143 (255)
T PRK05717         66 ADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLA  143 (255)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEc
Confidence            98641000 01122223368999999997531         3456778999999999999999742  1235677764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.59  E-value=2.9e-14  Score=101.47  Aligned_cols=121  Identities=17%  Similarity=0.205  Sum_probs=83.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEE-eecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYI-LCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      |.+++++||||+|+||+++++.|++.|+   .|++ ..|+..  ...+....+..             ...++.++.+|+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~---~v~~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~   63 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGY---DIAVNYARSRK--AAEETAEEIEA-------------LGRKALAVKANV   63 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHHh-------------cCCeEEEEEcCC
Confidence            4578999999999999999999999987   4443 455432  11111111111             125678899999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.++++       ++|++||++|....       .+.+...+++|+.++..+++++.+.   .+.++||
T Consensus        64 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv  137 (250)
T PRK08063         64 GDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKII  137 (250)
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEE
Confidence            9865      4444443       68999999986431       3455667899999999999988753   2446888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       138 ~~s  140 (250)
T PRK08063        138 SLS  140 (250)
T ss_pred             EEc
Confidence            876

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.59  E-value=3.6e-14  Score=102.69  Aligned_cols=121  Identities=24%  Similarity=0.292  Sum_probs=85.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..  ...+...++..             ...++.++.+|++
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~   69 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGA---KVAILDRNQE--KAEAVVAEIKA-------------AGGEALAVKADVL   69 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEECCCC
Confidence            6789999999999999999999999987   6777887532  12222222111             1246788999999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEeccccccc----------------------hhhHHHHHHhhhHHHHHHHHH
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL----------------------EAELKENVAANTRGTQRLLDI  138 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~----------------------~~~~~~~~~~n~~~~~~l~~~  138 (152)
                      +++      ++..+       +.++|++||+||....                      .+++...+++|+.++..++++
T Consensus        70 ~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  143 (278)
T PRK08277         70 DKE------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQV  143 (278)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHH
Confidence            864      33333       3478999999985321                      355777899999999988777


Q ss_pred             HHhc---CCCcceEecC
Q psy11862        139 ALKM---KKLVVSLDIG  152 (152)
Q Consensus       139 ~~~~---~~~~~~v~~S  152 (152)
                      +.+.   .+.+++|++|
T Consensus       144 ~~~~~~~~~~g~ii~is  160 (278)
T PRK08277        144 FAKDMVGRKGGNIINIS  160 (278)
T ss_pred             HHHHHHhcCCcEEEEEc
Confidence            6542   2346788775

>PRK06196 oxidoreductase; Provisional

Probab=99.59  E-value=2.2e-14  Score=105.70  Aligned_cols=117  Identities=15%  Similarity=0.252  Sum_probs=83.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|++.|+   +|++++|+..  ...+...++                 ..+.++.+|++
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~---~Vv~~~R~~~--~~~~~~~~l-----------------~~v~~~~~Dl~   81 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGA---HVIVPARRPD--VAREALAGI-----------------DGVEVVMLDLA   81 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh-----------------hhCeEEEccCC
Confidence            4678999999999999999999999986   6778888532  111111111                 23678899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +.+      ++.+++       .++|++|||||....     ...++..+++|+.++..+++++.+.   .+..++|++|
T Consensus        82 d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vS  155 (315)
T PRK06196         82 DLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALS  155 (315)
T ss_pred             CHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEC
Confidence            854      444433       468999999996432     3456778999999998888876532   2346888876

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.59  E-value=2.4e-14  Score=105.77  Aligned_cols=121  Identities=18%  Similarity=0.184  Sum_probs=85.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|++.|+   +|++.+|+..  ...+....+.             .....+.++.+|++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~~--~~~~~~~~l~-------------~~~~~~~~~~~Dl~   65 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGW---HVIMACRNLK--KAEAAAQELG-------------IPPDSYTIIHIDLG   65 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHhh-------------ccCCceEEEEecCC
Confidence            4578999999999999999999999986   6788887532  1111111111             01246888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CC--Ccc
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KK--LVV  147 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~  147 (152)
                      +.+      ++.++++       ++|++|||||...        ..+.++..+++|+.+++++++++.+.   .+  .++
T Consensus        66 ~~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~r  139 (322)
T PRK07453         66 DLD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPR  139 (322)
T ss_pred             CHH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence            865      4444432       5899999999642        13456778999999999998887642   11  248


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       140 iV~vs  144 (322)
T PRK07453        140 LVILG  144 (322)
T ss_pred             EEEEc
Confidence            88875

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.59  E-value=3.2e-14  Score=105.79  Aligned_cols=123  Identities=17%  Similarity=0.182  Sum_probs=86.7

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||++++++|+++|+   +|++++|+..  .+.+...++..             ...++.++.+|
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~---~Vvl~~R~~~--~l~~~~~~l~~-------------~g~~~~~v~~D   65 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGA---KVVLLARGEE--GLEALAAEIRA-------------AGGEALAVVAD   65 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHH-------------cCCcEEEEEec
Confidence            347789999999999999999999999986   6777887532  11221122211             13568889999


Q ss_pred             cCCCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++|++      ++.++       +.++|++||++|....       .+.++..+++|+.++.++.+.+.+.   .+.++|
T Consensus        66 v~d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~i  139 (334)
T PRK07109         66 VADAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAI  139 (334)
T ss_pred             CCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence            99865      34443       3478999999996431       4566778999999988877766532   134678


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       140 V~is  143 (334)
T PRK07109        140 IQVG  143 (334)
T ss_pred             EEeC
Confidence            8875

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.59  E-value=2.9e-14  Score=101.43  Aligned_cols=119  Identities=16%  Similarity=0.196  Sum_probs=85.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|+++|+   .|++++|+.. ....+.+..                ...++.++.+|++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~vi~~~r~~~-~~~~~~~~~----------------~~~~~~~~~~D~~   62 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGA---DIVGAGRSEP-SETQQQVEA----------------LGRRFLSLTADLS   62 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCchH-HHHHHHHHh----------------cCCceEEEECCCC
Confidence            6789999999999999999999999986   6777777531 111111111                1246888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v  149 (152)
                      +++      ++..++       .++|++||++|....       ...+.+.+++|+.++..+++++.+.   .+ .+++|
T Consensus        63 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv  136 (248)
T TIGR01832        63 DIE------AIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKII  136 (248)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            865      343332       468999999997532       3467778999999999999988642   12 35788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       137 ~~s  139 (248)
T TIGR01832       137 NIA  139 (248)
T ss_pred             EEe
Confidence            765

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.59  E-value=3.7e-14  Score=101.41  Aligned_cols=128  Identities=17%  Similarity=0.160  Sum_probs=89.4

Q ss_pred             Cccccc-ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862          1 MGDVAR-WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRL   79 (152)
Q Consensus         1 ~~~~~~-~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (152)
                      |+.+.. .+++++++||||+|+||++++++|+++|+   .|++++|+..  .+.+...++..             ...++
T Consensus         1 ~~~~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~   62 (256)
T PRK06124          1 MSILQRFSLAGQVALVTGSARGLGFEIARALAGAGA---HVLVNGRNAA--TLEAAVAALRA-------------AGGAA   62 (256)
T ss_pred             CCcccccCCCCCEEEEECCCchHHHHHHHHHHHcCC---eEEEEeCCHH--HHHHHHHHHHh-------------cCCce
Confidence            344443 25789999999999999999999999986   6788888642  11221222211             12468


Q ss_pred             EEEEcccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---
Q psy11862         80 HIIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---  142 (152)
Q Consensus        80 ~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---  142 (152)
                      .++.+|+++++      ++.+++       .++|++||++|....       .+.++..+++|+.++..+.+++.+.   
T Consensus        63 ~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  136 (256)
T PRK06124         63 EALAFDIADEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKR  136 (256)
T ss_pred             EEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            88999999865      344333       367999999996431       4567778999999999999877541   


Q ss_pred             CCCcceEecC
Q psy11862        143 KKLVVSLDIG  152 (152)
Q Consensus       143 ~~~~~~v~~S  152 (152)
                      .+.+++|++|
T Consensus       137 ~~~~~iv~~s  146 (256)
T PRK06124        137 QGYGRIIAIT  146 (256)
T ss_pred             cCCcEEEEEe
Confidence            2456788765

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.59  E-value=3.1e-14  Score=101.19  Aligned_cols=121  Identities=20%  Similarity=0.189  Sum_probs=86.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|+||+++++.|+++|+   +|++++|+..  ...+...++..             ...++.++.+|++
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~   66 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGA---TVAFNDGLAA--EARELAAALEA-------------AGGRAHAIAADLA   66 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence            6689999999999999999999999986   5677776532  11221112111             1246888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++||++|....       .+.+...++.|+.++.++++++.+.   .+.+++|+
T Consensus        67 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~  140 (250)
T PRK12939         67 DPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVN  140 (250)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence            865      444443       468999999997431       3456778899999999999888642   12357888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       141 is  142 (250)
T PRK12939        141 LA  142 (250)
T ss_pred             EC
Confidence            75

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.3e-14  Score=105.64  Aligned_cols=123  Identities=16%  Similarity=0.201  Sum_probs=87.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+++||++++++|++.|+   +|++.+|+..  ...+.++++..         .  .....+.++.+|++
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~---~Vil~~R~~~--~~~~~~~~l~~---------~--~~~~~v~~~~~Dl~   75 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGA---EVILPVRNRA--KGEAAVAAIRT---------A--VPDAKLSLRALDLS   75 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH---------h--CCCCceEEEEecCC
Confidence            6789999999999999999999999986   7788888643  22222222211         0  01246888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +.+      ++.+++       .++|++|||||....      .+.++..+.+|+.+++.+.+.+.+.  .+..++|++|
T Consensus        76 d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vs  149 (313)
T PRK05854         76 SLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQS  149 (313)
T ss_pred             CHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence            854      344333       368999999997532      3567778999999999998887642  1235777764

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.59  E-value=4.9e-14  Score=99.74  Aligned_cols=121  Identities=20%  Similarity=0.249  Sum_probs=86.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++|||++|++|.++++.|+++|+   .|++++|++.  ........+..             ...++.++.+|++
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   64 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGA---KVVIYDSNEE--AAEALAAELRA-------------AGGEARVLVFDVS   64 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCChh--HHHHHHHHHHh-------------cCCceEEEEccCC
Confidence            4568999999999999999999999987   5788888643  11111111111             1356888899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+.+       .++|++||++|....       .+.+...++.|+.++.++++++.+.   .+.++||+
T Consensus        65 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~  138 (246)
T PRK05653         65 DEA------AVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVN  138 (246)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            865      343333       357999999986532       3456778999999999999888531   24578888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       139 ~s  140 (246)
T PRK05653        139 IS  140 (246)
T ss_pred             EC
Confidence            76

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.58  E-value=3.7e-14  Score=101.49  Aligned_cols=120  Identities=14%  Similarity=0.105  Sum_probs=86.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   ++++++|++...   +....+..             ...++.++.+|++
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~---~v~~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~D~~   65 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGA---IPVIFGRSAPDD---EFAEELRA-------------LQPRAEFVQVDLT   65 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCC---cEEEEcCChhhH---HHHHHHHh-------------cCCceEEEEccCC
Confidence            7789999999999999999999999986   566777765321   22222211             1256889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +++      ++.+.+       .++|++||++|...      ..+++...+++|+.++..+.+.+.+.  .+.++|+++|
T Consensus        66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s  139 (258)
T PRK08628         66 DDA------QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS  139 (258)
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence            865      344443       36899999999542      13567778999999999998887642  1235788775

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.58  E-value=2.1e-14  Score=102.89  Aligned_cols=124  Identities=19%  Similarity=0.213  Sum_probs=86.3

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |+...+ +++++++||||+|+||++++++|++.|+   +|++++|+....                        ...++.
T Consensus         1 ~~~~~~-~~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~r~~~~~------------------------~~~~~~   52 (260)
T PRK06523          1 MSFFLE-LAGKRALVTGGTKGIGAATVARLLEAGA---RVVTTARSRPDD------------------------LPEGVE   52 (260)
T ss_pred             CCcCcC-CCCCEEEEECCCCchhHHHHHHHHHCCC---EEEEEeCChhhh------------------------cCCcee
Confidence            344444 7789999999999999999999999986   678888864310                        014577


Q ss_pred             EEEcccCCCCCCCC-hhHHHHHhccccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862         81 IIEGDILQANLGIK-DSDLLMLQEEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KKLVV  147 (152)
Q Consensus        81 ~~~~D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~  147 (152)
                      ++.+|+++++.... .+.+.+.+.++|++||+||...         ..+.+...+++|+.++..+.+++.+.   .+.++
T Consensus        53 ~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~  132 (260)
T PRK06523         53 FVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGV  132 (260)
T ss_pred             EEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcE
Confidence            88999998651000 0112233347899999999532         24567778999999999888776532   23457


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       133 ii~is  137 (260)
T PRK06523        133 IIHVT  137 (260)
T ss_pred             EEEEe
Confidence            88765

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.58  E-value=2.4e-14  Score=103.58  Aligned_cols=118  Identities=18%  Similarity=0.212  Sum_probs=84.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |.+++++||||+|+||++++++|+++|+   +|++++|+..      .+.++..            .....+.++.+|++
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~   59 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGD---RVVATARDTA------TLADLAE------------KYGDRLLPLALDVT   59 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH------------hccCCeeEEEccCC
Confidence            3468999999999999999999999986   6788887532      1111111            01245778899998


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~  150 (152)
                      +++      ++...+       .++|++||+||....       .+.++.++++|+.++..+++++.+   ..+.+++|+
T Consensus        60 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  133 (275)
T PRK08263         60 DRA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQ  133 (275)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            865      343333       367999999997542       457788999999999999888742   124568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       134 vs  135 (275)
T PRK08263        134 IS  135 (275)
T ss_pred             Ec
Confidence            75

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.58  E-value=3.8e-14  Score=101.28  Aligned_cols=121  Identities=16%  Similarity=0.160  Sum_probs=85.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|+++|+   +|++.+|+..  ...+....+..             ...++..+.+|++
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~D~~   68 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGA---QVAIAARHLD--ALEKLADEIGT-------------SGGKVVPVCCDVS   68 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHH--HHHHHHHHHHh-------------cCCeEEEEEccCC
Confidence            6789999999999999999999999986   6777777532  12221111111             1246778899999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceE
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v  149 (152)
                      +++      ++.++       +.++|++|||+|....       .+.++..+++|+.++..+.+++.+.   .+ ..++|
T Consensus        69 ~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv  142 (253)
T PRK05867         69 QHQ------QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVII  142 (253)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEE
Confidence            865      34333       3478999999997532       4567778999999999999987642   11 24577


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       143 ~~s  145 (253)
T PRK05867        143 NTA  145 (253)
T ss_pred             EEC
Confidence            664

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.58  E-value=4.5e-14  Score=100.43  Aligned_cols=121  Identities=17%  Similarity=0.184  Sum_probs=85.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   .|++++|+..  ...+....+..             ...++.++.+|++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~d~~   62 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGA---KVAVFDLNRE--AAEKVAADIRA-------------KGGNAQAFACDIT   62 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence            4678999999999999999999999986   6777777542  11111111111             1246888999998


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~  150 (152)
                      +.+      ++.+++       .++|++||++|...       ....++..+++|+.++.++++++.+   ..+.+++++
T Consensus        63 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~  136 (250)
T TIGR03206        63 DRD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVN  136 (250)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence            854      444443       36899999998643       1345667899999999999888763   124567887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       137 is  138 (250)
T TIGR03206       137 IA  138 (250)
T ss_pred             EC
Confidence            75

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.58  E-value=3.9e-14  Score=103.82  Aligned_cols=119  Identities=26%  Similarity=0.314  Sum_probs=84.6

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +++||||+|++|.+++++|++.|++. .|++++|...... .+.+..+..              ..++.++.+|+++++ 
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~-~v~~~~~~~~~~~-~~~~~~~~~--------------~~~~~~~~~Dl~~~~-   63 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDA-EVIVLDKLTYAGN-LENLADLED--------------NPRYRFVKGDIGDRE-   63 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCC-EEEEecCCCcchh-hhhhhhhcc--------------CCCcEEEEcCCcCHH-
Confidence            58999999999999999999986433 6677766322111 111111100              136788899999865 


Q ss_pred             CCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         92 GIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        92 ~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                           ++.+++++  +|+|||+|+....   ...+..++++|+.++.++++++.+.....++|++|
T Consensus        64 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S  124 (317)
T TIGR01181        64 -----LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHIS  124 (317)
T ss_pred             -----HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence                 68888776  8999999997543   34566688999999999999998752223788875

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.58  E-value=1.4e-14  Score=102.03  Aligned_cols=110  Identities=28%  Similarity=0.386  Sum_probs=85.5

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      |+||||+|++|++++++|++.|+   .|+.+.|+......    ...                ..++.++.+|+.+.+  
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~---~v~~~~~~~~~~~~----~~~----------------~~~~~~~~~dl~~~~--   55 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGH---EVIVLSRSSNSESF----EEK----------------KLNVEFVIGDLTDKE--   55 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTT---EEEEEESCSTGGHH----HHH----------------HTTEEEEESETTSHH--
T ss_pred             EEEEccCCHHHHHHHHHHHHcCC---cccccccccccccc----ccc----------------cceEEEEEeeccccc--
Confidence            79999999999999999999987   46677776542211    000                027889999999744  


Q ss_pred             CChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         93 IKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        93 ~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                          ++.++++.  +|+|||+|+....   .......++.|+.++.++++++.+. +++++|++|
T Consensus        56 ----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~s  115 (236)
T PF01370_consen   56 ----QLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLS  115 (236)
T ss_dssp             ----HHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred             ----cccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccc
Confidence                68888875  5999999997531   3456678999999999999999998 568999875

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.58  E-value=5.3e-14  Score=100.18  Aligned_cols=120  Identities=20%  Similarity=0.182  Sum_probs=85.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|++|.+++++|++.|+   +|+++.|+..  ...+....+.              ...++.++.+|++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~--------------~~~~~~~~~~D~~   63 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGA---RVVVADRDAE--AAERVAAAIA--------------AGGRAFARQGDVG   63 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCC---eEEEecCCHH--HHHHHHHHHh--------------cCCeEEEEEcCCC
Confidence            5688999999999999999999999986   6778777642  1122111111              1256888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++||++|...       ..+.+...+.+|+.++.++.+.+.+   ..+.+++++
T Consensus        64 ~~~------~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~  137 (252)
T PRK06138         64 SAE------AVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVN  137 (252)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEE
Confidence            865      444443       37899999999643       2455666899999999888877643   124568887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       138 ~s  139 (252)
T PRK06138        138 TA  139 (252)
T ss_pred             EC
Confidence            75

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=4.7e-14  Score=100.33  Aligned_cols=120  Identities=18%  Similarity=0.217  Sum_probs=87.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|++|.+++++|++.|+   +|++++|+..  ...+....+..              ..++.++.+|++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~--------------~~~~~~~~~D~~   63 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGA---RVVVTDRNEE--AAERVAAEILA--------------GGRAIAVAADVS   63 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHhc--------------CCeEEEEECCCC
Confidence            5678999999999999999999999987   5788888643  11111111110              246888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      ++..++       .++|+|||++|...        ..+.+...+++|+.++..+++.+.+.   .+.++||
T Consensus        64 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv  137 (251)
T PRK07231         64 DEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIV  137 (251)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            865      454444       36799999998642        13556778999999999888887642   2456788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       138 ~~s  140 (251)
T PRK07231        138 NVA  140 (251)
T ss_pred             EEc
Confidence            875

>PRK08589 short chain dehydrogenase; Validated

Probab=99.58  E-value=5.2e-14  Score=101.71  Aligned_cols=120  Identities=15%  Similarity=0.158  Sum_probs=85.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+ .  ...+...++..             ...++.++.+|++
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~---~vi~~~r~-~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~   64 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGA---YVLAVDIA-E--AVSETVDKIKS-------------NGGKAKAYHVDIS   64 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCc-H--HHHHHHHHHHh-------------cCCeEEEEEeecC
Confidence            6789999999999999999999999986   67888875 2  22222222211             1246888999999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEe
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~  150 (152)
                      +++      ++..+       +.++|++|||||....        .+.++.++++|+.++..+++++.+.  ....++|+
T Consensus        65 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~  138 (272)
T PRK08589         65 DEQ------QVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIIN  138 (272)
T ss_pred             CHH------HHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence            865      33333       3468999999997531        3456778999999999888887642  11257887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       139 is  140 (272)
T PRK08589        139 TS  140 (272)
T ss_pred             eC
Confidence            75

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.58  E-value=5e-14  Score=101.30  Aligned_cols=118  Identities=18%  Similarity=0.201  Sum_probs=86.9

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |+.+.+ +++++++||||+|+||.++++.|+++|+   +|++.+|+....                        ...++.
T Consensus         1 ~~~~~~-l~~k~vlItG~s~gIG~~la~~l~~~G~---~v~~~~~~~~~~------------------------~~~~~~   52 (266)
T PRK06171          1 MQDWLN-LQGKIIIVTGGSSGIGLAIVKELLANGA---NVVNADIHGGDG------------------------QHENYQ   52 (266)
T ss_pred             Cccccc-CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCcccc------------------------ccCceE
Confidence            455553 6789999999999999999999999986   667777754311                        013577


Q ss_pred             EEEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc----------------chhhHHHHHHhhhHHHHHHHH
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK----------------LEAELKENVAANTRGTQRLLD  137 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~----------------~~~~~~~~~~~n~~~~~~l~~  137 (152)
                      ++.+|+++++      ++.+++       .++|++||+||...                ..+.++..+++|+.++..+++
T Consensus        53 ~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (266)
T PRK06171         53 FVPTDVSSAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQ  126 (266)
T ss_pred             EEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHH
Confidence            8899999865      344433       36899999999632                235567789999999999998


Q ss_pred             HHHhc---CCCcceEecC
Q psy11862        138 IALKM---KKLVVSLDIG  152 (152)
Q Consensus       138 ~~~~~---~~~~~~v~~S  152 (152)
                      ++.+.   .+..++|++|
T Consensus       127 ~~~~~~~~~~~g~iv~is  144 (266)
T PRK06171        127 AVARQMVKQHDGVIVNMS  144 (266)
T ss_pred             HHHHHHHhcCCcEEEEEc
Confidence            88753   1335788765

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.58  E-value=5e-14  Score=100.69  Aligned_cols=121  Identities=21%  Similarity=0.173  Sum_probs=86.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.+++++||||+|+||+++++.|+++|+   .|++++|++.  ...+....+..             ...++.++.+|++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   64 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGA---DVVLAARTAE--RLDEVAAEIDD-------------LGRRALAVPTDIT   64 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHH-------------hCCceEEEecCCC
Confidence            5679999999999999999999999997   6778887542  11221111111             1246788999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~  150 (152)
                      +++      ++..++       .++|++||+||...        ..+.+...+++|+.++..+++++.+.  ...++||+
T Consensus        65 ~~~------~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~  138 (258)
T PRK07890         65 DED------QCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVM  138 (258)
T ss_pred             CHH------HHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEE
Confidence            865      343333       46899999998642        14667778999999999999998752  12247887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       139 ~s  140 (258)
T PRK07890        139 IN  140 (258)
T ss_pred             Ee
Confidence            65

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.58  E-value=4.5e-14  Score=101.92  Aligned_cols=123  Identities=15%  Similarity=0.044  Sum_probs=84.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|++.|+   .|++.+|++.      .+.+....             ...+.++.+|++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~---~v~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~   60 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGA---RVAIGDLDEA------LAKETAAE-------------LGLVVGGPLDVT   60 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHHH-------------hccceEEEccCC
Confidence            5678999999999999999999999986   5677777532      12211110             124678899999


Q ss_pred             CCCCC-CChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLG-IKDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~-~~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +++.- ...+.+.+.+.++|++||+||....       .+.+..++++|+.++..+.+.+.+.   .+.+++|++|
T Consensus        61 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~is  136 (273)
T PRK07825         61 DPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVA  136 (273)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEc
Confidence            86510 0011122233468999999997531       4457778999999999988887542   2456788876

>PRK07985 oxidoreductase; Provisional

Probab=99.57  E-value=7.5e-14  Score=102.06  Aligned_cols=129  Identities=14%  Similarity=0.104  Sum_probs=85.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   .|++..|+..... .+.+.+...            ....++.++.+|++
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~---~Vi~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~~Dl~  110 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGA---DVAISYLPVEEED-AQDVKKIIE------------ECGRKAVLLPGDLS  110 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEecCCcchhh-HHHHHHHHH------------HcCCeEEEEEccCC
Confidence            5678999999999999999999999997   5666665433222 122222111            01246778899999


Q ss_pred             CCCCCCC-hhHHHHHhccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         88 QANLGIK-DSDLLMLQEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      +++.-.. .+++.+.+.++|++||+||...        ..+++...+++|+.++..+++++.+. ....++|++|
T Consensus       111 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iS  185 (294)
T PRK07985        111 DEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTS  185 (294)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEEC
Confidence            8641000 0112222346899999998632        14667889999999999999998753 1225788775

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.57  E-value=7.7e-14  Score=100.22  Aligned_cols=118  Identities=19%  Similarity=0.199  Sum_probs=85.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   .|++.+|+..  ...+....+                ..++.++.+|++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~----------------~~~~~~~~~Dl~   62 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGA---RVAIVDIDAD--NGAAVAASL----------------GERARFIATDIT   62 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh----------------CCeeEEEEecCC
Confidence            5689999999999999999999999986   6788888532  111111110                246788999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +++      ++.+++       .++|++||+||...      ..+.+...+++|+.++..+++++.+.  ++.+++|++|
T Consensus        63 ~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~is  136 (261)
T PRK08265         63 DDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFT  136 (261)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence            865      343333       46899999998642      24567788999999999999887642  2335777765

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.57  E-value=4.8e-14  Score=101.18  Aligned_cols=120  Identities=14%  Similarity=0.196  Sum_probs=85.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..   ..+....+..             ...++.++.+|++
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~---~Vv~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~Dl~   64 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGA---NLILLDISPE---IEKLADELCG-------------RGHRCTAVVADVR   64 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCHH---HHHHHHHHHH-------------hCCceEEEECCCC
Confidence            5679999999999999999999999986   6777777532   1222222211             1246778899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++..++       .++|++||++|....       .+.++..+++|+.++..+++++.+.   .+..++|+
T Consensus        65 ~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~  138 (263)
T PRK08226         65 DPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVM  138 (263)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            865      344433       368999999996432       4556678999999999999987642   13457777


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       139 is  140 (263)
T PRK08226        139 MS  140 (263)
T ss_pred             EC
Confidence            64

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3.7e-14  Score=101.25  Aligned_cols=118  Identities=15%  Similarity=0.206  Sum_probs=85.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.++++.|+++|+   +|++++|+..   ..+.....               ....+.++.+|++
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~---~Vi~~~r~~~---~~~~~~~~---------------~~~~~~~~~~Dl~   71 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGA---RVALLDRSED---VAEVAAQL---------------LGGNAKGLVCDVS   71 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH---HHHHHHHh---------------hCCceEEEEecCC
Confidence            5688999999999999999999999986   6778888543   11111111               0245668899998


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++..++       .++|++||++|....       .+.+...+++|+.++.++++++.+.   .+.++||+
T Consensus        72 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  145 (255)
T PRK06841         72 DSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVN  145 (255)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEE
Confidence            865      344433       368999999997532       3456678999999999999988652   23568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       146 ~s  147 (255)
T PRK06841        146 LA  147 (255)
T ss_pred             Ec
Confidence            75

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=7.9e-14  Score=99.73  Aligned_cols=116  Identities=22%  Similarity=0.308  Sum_probs=81.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++..++..     +..+.+..               .++.++.+|++
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~---~v~~~~~~~~-----~~~~~l~~---------------~~~~~~~~Dl~   61 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGA---KVAVLYNSAE-----NEAKELRE---------------KGVFTIKCDVG   61 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCcH-----HHHHHHHh---------------CCCeEEEecCC
Confidence            5689999999999999999999999987   5566555322     11122111               24678899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++||++|...       ..+.+...+++|+.++..+.+.+.+.   .+.+++|+
T Consensus        62 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~  135 (255)
T PRK06463         62 NRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVN  135 (255)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            865      344433       36899999998743       14567778999999988877766431   23467887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       136 is  137 (255)
T PRK06463        136 IA  137 (255)
T ss_pred             Ec
Confidence            75

>PRK09186 flagellin modification protein A; Provisional

Probab=99.57  E-value=7.3e-14  Score=99.74  Aligned_cols=123  Identities=19%  Similarity=0.218  Sum_probs=84.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|++.|+   +|++.+|+..  ...+...++...           .....+.++.+|++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~---~v~~~~r~~~--~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~   65 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGG---IVIAADIDKE--ALNELLESLGKE-----------FKSKKLSLVELDIT   65 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecChH--HHHHHHHHHHhh-----------cCCCceeEEEecCC
Confidence            5689999999999999999999999987   5677777543  222222222110           01234667799999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc----------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK----------LEAELKENVAANTRGTQRLLDIALKM---KKLVV  147 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~  147 (152)
                      +++      ++.+++.       ++|++||||+...          ....+...+++|+.++..+++++.+.   .+.++
T Consensus        66 d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  139 (256)
T PRK09186         66 DQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGN  139 (256)
T ss_pred             CHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCce
Confidence            865      4444443       4899999997432          13456778899999998887776542   24568


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       140 iv~~s  144 (256)
T PRK09186        140 LVNIS  144 (256)
T ss_pred             EEEEe
Confidence            88875

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.57  E-value=6.3e-14  Score=95.70  Aligned_cols=119  Identities=19%  Similarity=0.254  Sum_probs=85.4

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC-CCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA-KRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      +++||||.|++|..+++.|++++.  ++++++.|+ .......+.+.++...             ...+.++.+|++|++
T Consensus         2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i~~l~~~-------------g~~v~~~~~Dv~d~~   66 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAIRELESA-------------GARVEYVQCDVTDPE   66 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHHHHHT-------------T-EEEEEE--TTSHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHHHHHHhC-------------CCceeeeccCccCHH
Confidence            689999999999999999999974  689999998 3334455566665443             368999999999965


Q ss_pred             CCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++.+++.       +++.|||+||...       .++.+...+...+.++.+|.++.... .++.||++|
T Consensus        67 ------~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~S  135 (181)
T PF08659_consen   67 ------AVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFS  135 (181)
T ss_dssp             ------HHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEE
T ss_pred             ------HHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEEC
Confidence                  5666653       5799999999754       25667778999999999999999885 678888765

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3.5e-14  Score=102.79  Aligned_cols=123  Identities=15%  Similarity=0.169  Sum_probs=85.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++||||+|++|.++++.|+++|+   .|++++|+..  ...+........           ....++.++.+|++
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~D~~   64 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGY---LVIATMRNPE--KQENLLSQATQL-----------NLQQNIKVQQLDVT   64 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCC---EEEEEeCCHH--HHHHHHHHHHhc-----------CCCCceeEEecCCC
Confidence            4578999999999999999999999986   6778887643  111111111100           01246888999999


Q ss_pred             CCCCCCChhHHHH------HhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLM------LQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~------~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      ++..      .+.++|++||++|....       .+.+...+++|+.++.++++.+.+.   .+.+++|++
T Consensus        65 d~~------~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~v  138 (280)
T PRK06914         65 DQN------SIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINI  138 (280)
T ss_pred             CHH------HHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            865      3332      23468999999986542       3566778899999999998886431   245688887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       139 s  139 (280)
T PRK06914        139 S  139 (280)
T ss_pred             C
Confidence            5

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.57  E-value=1.4e-13  Score=99.59  Aligned_cols=127  Identities=14%  Similarity=0.213  Sum_probs=86.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||.++++.|+++|+   +|++++|+.... .....+.+...     .+.    ....++.++.+|+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~~~-----~~~----~~~~~~~~~~~D~   71 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGA---NIVIAAKTAEPHPKLPGTIHTAAE-----EIE----AAGGQALPLVGDV   71 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecccccccchhhHHHHHHH-----HHH----hcCCceEEEEecC
Confidence            5678999999999999999999999986   678888865321 11111211110     011    1134688899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++||+||....       .+.+...+++|+.++.++++++.+.   .+-.+++
T Consensus        72 ~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv  145 (273)
T PRK08278         72 RDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHIL  145 (273)
T ss_pred             CCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEE
Confidence            9965      344433       378999999997431       3556778999999999999998642   1234666


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       146 ~is  148 (273)
T PRK08278        146 TLS  148 (273)
T ss_pred             EEC
Confidence            654

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.56  E-value=6.9e-14  Score=100.24  Aligned_cols=117  Identities=15%  Similarity=0.068  Sum_probs=83.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |++++||||+|+||++++++|++.|+   +|++++|+..      .+.++...         ..  ...+.++.+|+++.
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~~~---------~~--~~~~~~~~~D~~~~   60 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGW---RVGAYDINEA------GLAALAAE---------LG--AGNAWTGALDVTDR   60 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH------HHHHHHHH---------hc--CCceEEEEecCCCH
Confidence            47899999999999999999999986   6778887532      12211110         00  24688899999885


Q ss_pred             CCCCChhHHHHHh--------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         90 NLGIKDSDLLMLQ--------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~--------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      .      ++.+.+        .++|++||+||....       .++++..+++|+.++..+++++.+.   .+..++|++
T Consensus        61 ~------~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i  134 (260)
T PRK08267         61 A------AWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINT  134 (260)
T ss_pred             H------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEe
Confidence            5      344433        357999999997532       3567778999999999998887531   234677776


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       135 s  135 (260)
T PRK08267        135 S  135 (260)
T ss_pred             C
Confidence            5

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.1e-13  Score=98.16  Aligned_cols=125  Identities=18%  Similarity=0.174  Sum_probs=85.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|+++|+   .|+++.|.....  .+....+..     ++    ......+.++.+|++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~---~v~~~~~~~~~~--~~~~~~~~~-----~~----~~~~~~~~~~~~Dl~   69 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGA---DVIVLDIHPMRG--RAEADAVAA-----GI----EAAGGKALGLAFDVR   69 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEcCccccc--HHHHHHHHH-----HH----HhcCCcEEEEEccCC
Confidence            5678999999999999999999999987   556665532211  111111110     00    011356889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v  149 (152)
                      +++      ++.+.+       .++|++||++|...       ..+.+...+++|+.++.++++++.+    ..+.+++|
T Consensus        70 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv  143 (249)
T PRK12827         70 DFA------ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIV  143 (249)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEE
Confidence            865      344443       36899999999754       1355677899999999999999872    12456788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       144 ~~s  146 (249)
T PRK12827        144 NIA  146 (249)
T ss_pred             EEC
Confidence            775

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.56  E-value=9.7e-14  Score=99.84  Aligned_cols=121  Identities=12%  Similarity=0.141  Sum_probs=86.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|+||.+++++|+++|+   +|++..|+..  ...+....+..             .+.++.++.+|++
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~---~vv~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~   69 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGA---TIVFNDINQE--LVDKGLAAYRE-------------LGIEAHGYVCDVT   69 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence            5789999999999999999999999986   5677776532  22222222111             1246888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++||++|...       ..+.+...+++|+.++..+.+++.+.   .+.++||+
T Consensus        70 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~  143 (265)
T PRK07097         70 DED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIIN  143 (265)
T ss_pred             CHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            865      444443       35899999999754       24567778999999999888887641   24567887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       144 is  145 (265)
T PRK07097        144 IC  145 (265)
T ss_pred             Ec
Confidence            65

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.56  E-value=7.3e-14  Score=102.18  Aligned_cols=120  Identities=18%  Similarity=0.187  Sum_probs=85.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.++++.|++.|+   +|++++|+..  .+.+...++             . ....+..+.+|++
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~l~~~~~~l-------------~-~~~~~~~~~~Dv~   67 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGA---KLALVDLEEA--ELAALAAEL-------------G-GDDRVLTVVADVT   67 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh-------------c-CCCcEEEEEecCC
Confidence            6789999999999999999999999986   6788887532  111111111             0 0245667779999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEec
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~  151 (152)
                      +++      ++.++       +.++|++|||||...       ..+.++..+++|+.++.++++++.+.  ...+++|++
T Consensus        68 d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~i  141 (296)
T PRK05872         68 DLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQV  141 (296)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEE
Confidence            865      34333       346899999999753       14567789999999999999988652  123578776


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       142 s  142 (296)
T PRK05872        142 S  142 (296)
T ss_pred             e
Confidence            5

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.56  E-value=8.9e-14  Score=98.57  Aligned_cols=118  Identities=20%  Similarity=0.259  Sum_probs=83.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|+++|+   .|+...|+..      .++.+..            ....++.++.+|++
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~---~v~~~~~~~~------~~~~~~~------------~~~~~~~~~~~D~~   62 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGA---IVGLHGTRVE------KLEALAA------------ELGERVKIFPANLS   62 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHH------HHHHHHH------------HhCCceEEEEccCC
Confidence            5678999999999999999999999986   5566555421      1221111            00246778899999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +.+      ++..+       +.++|++||+||...       ..+++..++++|+.++.++++++.+.   .+.++||+
T Consensus        63 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  136 (245)
T PRK12936         63 DRD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIIN  136 (245)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEE
Confidence            855      34333       346899999999643       23567778999999999998887532   24567888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       137 ~s  138 (245)
T PRK12936        137 IT  138 (245)
T ss_pred             EC
Confidence            75

>KOG1201|consensus

Probab=99.56  E-value=7e-14  Score=100.12  Aligned_cols=127  Identities=17%  Similarity=0.188  Sum_probs=92.1

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ...++++++||||++|+|++++.+++++|.   ++++-+.++.+  ..+........              .++..+.||
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~---~~vl~Din~~~--~~etv~~~~~~--------------g~~~~y~cd   94 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGA---KLVLWDINKQG--NEETVKEIRKI--------------GEAKAYTCD   94 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCC---eEEEEeccccc--hHHHHHHHHhc--------------CceeEEEec
Confidence            357899999999999999999999999984   67777766542  24444433221              368889999


Q ss_pred             cCCCCC-CCChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         86 ILQANL-GIKDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        86 ~~~~~~-~~~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++++- -...+++++.++.+|++|||||+...       .+..+.++++|+.+.++.+++..+.   .+-+|+|-+
T Consensus        95 is~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~I  171 (300)
T KOG1201|consen   95 ISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTI  171 (300)
T ss_pred             CCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEe
Confidence            999761 00022344555688999999998652       6677889999999999999988642   134577765

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.56  E-value=9e-14  Score=98.85  Aligned_cols=122  Identities=19%  Similarity=0.240  Sum_probs=84.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|+++|+   .+++..++.. ....+....+..             ...++.++.+|++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~---~v~~~~~~~~-~~~~~~~~~l~~-------------~~~~~~~~~~D~~   66 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGA---KVVINYNSSK-EAAENLVNELGK-------------EGHDVYAVQADVS   66 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEcCCcH-HHHHHHHHHHHh-------------cCCeEEEEECCCC
Confidence            5679999999999999999999999987   4454443221 111221122211             1246888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       .+|++||+||....       .+.+.+.+++|+.++..+++++.+.   .+.+++|+
T Consensus        67 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  140 (247)
T PRK12935         67 KVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIIS  140 (247)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            865      4444443       58999999997442       2567778999999999999998752   23457888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       141 ~s  142 (247)
T PRK12935        141 IS  142 (247)
T ss_pred             Ec
Confidence            75

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.56  E-value=7.4e-14  Score=99.71  Aligned_cols=113  Identities=20%  Similarity=0.183  Sum_probs=84.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   .|++++|+...        ..               ....+.++.+|++
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~---~v~~~~r~~~~--------~~---------------~~~~~~~~~~D~~   57 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGA---TVVVCGRRAPE--------TV---------------DGRPAEFHAADVR   57 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCChhh--------hh---------------cCCceEEEEccCC
Confidence            5789999999999999999999999986   67888875431        00               0246788899998


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v  149 (152)
                      +++      ++.+++       .++|++||+||...       ..+.++..+++|+.++..+++++.+.    .+.+++|
T Consensus        58 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii  131 (252)
T PRK07856         58 DPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIV  131 (252)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            864      344433       36799999998643       14567778999999999999988641    1235788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       132 ~is  134 (252)
T PRK07856        132 NIG  134 (252)
T ss_pred             EEc
Confidence            775

>PRK08643 acetoin reductase; Validated

Probab=99.55  E-value=1.5e-13  Score=98.29  Aligned_cols=119  Identities=18%  Similarity=0.197  Sum_probs=82.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||.+++++|+++|+   +|++++|+..  ...+...++..             ...++.++.+|++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~~~   63 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF---KVAIVDYNEE--TAQAAADKLSK-------------DGGKAIAVKADVSDR   63 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEECCCCCH
Confidence            57999999999999999999999986   6778887542  11221122111             124677899999986


Q ss_pred             CCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceEec
Q psy11862         90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM----KKLVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~  151 (152)
                      +      ++.+++       .++|++||+||....       .+.++..+++|+.++..+++.+.+.    +...++|++
T Consensus        64 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~  137 (256)
T PRK08643         64 D------QVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINA  137 (256)
T ss_pred             H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            5      343333       368999999986431       4556778999999998888777542    122467776


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       138 s  138 (256)
T PRK08643        138 T  138 (256)
T ss_pred             C
Confidence            5

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=1.2e-13  Score=97.81  Aligned_cols=122  Identities=21%  Similarity=0.284  Sum_probs=84.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|++|++++++|+++|+   .+++..|+..  ...+.+....            .....++.++.+|++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~---~v~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~~D~~   66 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGA---DVVVHYRSDE--EAAEELVEAV------------EALGRRAQAVQADVT   66 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCCH--HHHHHHHHHH------------HhcCCceEEEECCcC
Confidence            4568999999999999999999999987   4455555432  1111121110            011256888999998


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++||++|....       .+.+...+++|+.++.++++.+.+   ..+.+++|+
T Consensus        67 ~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~  140 (249)
T PRK12825         67 DKA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVN  140 (249)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            865      454443       367999999996432       445677899999999999988843   224678888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       141 ~S  142 (249)
T PRK12825        141 IS  142 (249)
T ss_pred             EC
Confidence            76

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.3e-13  Score=97.17  Aligned_cols=119  Identities=18%  Similarity=0.171  Sum_probs=85.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|+||+++++.|+++|+   +|++++|+..  ...+.+..+..               .....+.+|+.
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~---------------~~~~~~~~D~~   64 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGA---RVALIGRGAA--PLSQTLPGVPA---------------DALRIGGIDLV   64 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCC---eEEEEeCChH--hHHHHHHHHhh---------------cCceEEEeecC
Confidence            5689999999999999999999999986   6788888643  22222222211               24567789998


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +.+      ++..++       .++|+|||++|...       ..+.+.+.+..|+.++.++++++.+.   .+.+++|+
T Consensus        65 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~  138 (239)
T PRK12828         65 DPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVN  138 (239)
T ss_pred             CHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEE
Confidence            854      344433       36899999998643       13456667899999999998887531   24678888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       139 ~s  140 (239)
T PRK12828        139 IG  140 (239)
T ss_pred             EC
Confidence            75

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.55  E-value=1.2e-13  Score=98.11  Aligned_cols=122  Identities=16%  Similarity=0.161  Sum_probs=83.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++|||++|+||++++++|++.|+   .+++..++.. ....+.+.++..             ....+..+.+|++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~---~vv~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~   63 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGF---KVVAGCGPNS-PRRVKWLEDQKA-------------LGFDFIASEGNVG   63 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEcCCCh-HHHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence            4678999999999999999999999986   4555443221 112222222211             1246778899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +.+      ++.+.+       .++|++||++|...       ..+.+..++++|+.+++.+.+++.+.   .+.+++|+
T Consensus        64 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~  137 (246)
T PRK12938         64 DWD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIIN  137 (246)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence            864      343333       46899999999753       24567778999999999888776542   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       138 is  139 (246)
T PRK12938        138 IS  139 (246)
T ss_pred             Ee
Confidence            75

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.55  E-value=4.5e-14  Score=100.45  Aligned_cols=121  Identities=16%  Similarity=0.149  Sum_probs=84.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHH-HHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLA-EFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|+++|+   .|++++|+... . .+.+. .+..             ...++.++.+|+
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~---~V~~~~r~~~~-~-~~~~~~~l~~-------------~~~~~~~~~~D~   65 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGA---HVVVNYRQKAP-R-ANKVVAEIEA-------------AGGRASAVGADL   65 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCchH-h-HHHHHHHHHh-------------cCCceEEEEcCC
Confidence            5678999999999999999999999987   56777775421 1 12111 1111             124678899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      ++++      ++.+++       .++|++||+||... ...++...+++|+.++.++++++.+. ....++|++|
T Consensus        66 ~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is  134 (248)
T PRK07806         66 TDEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVT  134 (248)
T ss_pred             CCHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence            9865      444433       36899999998642 22345567889999999999999864 1234788775

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.1e-13  Score=97.82  Aligned_cols=120  Identities=20%  Similarity=0.241  Sum_probs=84.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.+++++||||+|++|++++++|+++|+   +|++++|++.  ...+....+..              ..++.++.+|+.
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~---~V~~~~r~~~--~~~~~~~~l~~--------------~~~~~~~~~D~~   64 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGY---KVAITARDQK--ELEEAAAELNN--------------KGNVLGLAADVR   64 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEeeCCHH--HHHHHHHHHhc--------------cCcEEEEEccCC
Confidence            4578999999999999999999999886   6788888542  11111111110              146888999998


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~  151 (152)
                      +++      ++...+       .++|++||++|....       .+.+.+.+++|+.++..+++++.+.  .+.+++|++
T Consensus        65 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~  138 (237)
T PRK07326         65 DEA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINI  138 (237)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEE
Confidence            854      344333       378999999986432       3456678999999999998887642  134578876


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       139 s  139 (237)
T PRK07326        139 S  139 (237)
T ss_pred             C
Confidence            5

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.55  E-value=1.8e-13  Score=97.52  Aligned_cols=125  Identities=13%  Similarity=0.094  Sum_probs=83.8

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++|||++|++|++++++|+++|+   .|++++|+..  . .+.+.....            ....++.++.+|+.++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~---~v~~~~r~~~--~-~~~~~~~~~------------~~~~~~~~~~~D~~~~   62 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA---NVVVNDLGEA--G-AEAAAKVAT------------DAGGSVIYLVADVTKE   62 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHHH------------hcCCceEEEECCCCCH
Confidence            46899999999999999999999986   6788888632  1 111111100            0124688899999986


Q ss_pred             CCCC-ChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862         90 NLGI-KDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~-~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S  152 (152)
                      +.-. ....+.+.+.++|++||+++....       ...++.++..|+.++..+++++.+   ..+.+++|++|
T Consensus        63 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~s  136 (255)
T TIGR01963        63 DEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIA  136 (255)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence            4100 000222333468999999986542       345667888999999999888743   12467888876

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.55  E-value=1.1e-13  Score=98.61  Aligned_cols=115  Identities=22%  Similarity=0.266  Sum_probs=82.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|++|.++++.|+++|+   +|++++|++.      .+..+..         .   ...++.++.+|+++.+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~~---------~---~~~~~~~~~~Dl~~~~   59 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGH---KVIATGRRQE------RLQELKD---------E---LGDNLYIAQLDVRNRA   59 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH---------H---hccceEEEEecCCCHH
Confidence            5799999999999999999999986   6778888532      1222111         0   0246788999999864


Q ss_pred             CCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                            ++...+       .++|++||++|...        ..+.++.++++|+.++..+++.+.+.   .+.+++|++|
T Consensus        60 ------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is  133 (248)
T PRK10538         60 ------AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIG  133 (248)
T ss_pred             ------HHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence                  344333       37899999998642        24566778999999988888877532   2456888875

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.3e-13  Score=98.48  Aligned_cols=121  Identities=18%  Similarity=0.231  Sum_probs=85.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|++.|+   +|++++|+..  ...+....+..             ...++.++.+|++
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   66 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGA---KVVVADRDAA--GGEETVALIRE-------------AGGEALFVACDVT   66 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence            5689999999999999999999999986   6788888643  12222222111             1256888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v  149 (152)
                      +++      ++..++       .++|++||++|...        ..+++...+++|+.++..+++++.+   ..+.+++|
T Consensus        67 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii  140 (253)
T PRK06172         67 RDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIV  140 (253)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            854      344333       36799999999642        1356677899999999888776543   12345777


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       141 ~~s  143 (253)
T PRK06172        141 NTA  143 (253)
T ss_pred             EEC
Confidence            765

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.3e-13  Score=99.90  Aligned_cols=112  Identities=21%  Similarity=0.251  Sum_probs=80.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||+++++.|++.|+   +|++.+|+..      .+.++..               ..+.++.+|++++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~---~Vi~~~r~~~------~~~~l~~---------------~~~~~~~~Dl~d~   59 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGW---RVFATCRKEE------DVAALEA---------------EGLEAFQLDYAEP   59 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH---------------CCceEEEccCCCH
Confidence            57899999999999999999999986   6788888532      2222211               2467889999985


Q ss_pred             CCCCChhHHHHHh--------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHH----hcCCCcceEe
Q psy11862         90 NLGIKDSDLLMLQ--------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIAL----KMKKLVVSLD  150 (152)
Q Consensus        90 ~~~~~~~~~~~~~--------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~  150 (152)
                      +      ++..++        .++|++||+||....       .+.++..+++|+.++..+.+.+.    +. +.+++|+
T Consensus        60 ~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~  132 (277)
T PRK05993         60 E------SIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQ  132 (277)
T ss_pred             H------HHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEE
Confidence            4      333332        357999999986532       34567789999999776655543    33 4568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       133 is  134 (277)
T PRK05993        133 CS  134 (277)
T ss_pred             EC
Confidence            76

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.2e-13  Score=98.59  Aligned_cols=119  Identities=18%  Similarity=0.135  Sum_probs=84.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|++.|+   .|++++|+..  + .+.+.+..            .....++.++.+|++++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~---~v~~~~r~~~--~-~~~~~~~~------------~~~~~~~~~~~~D~~~~   63 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH---NVIAGVQIAP--Q-VTALRAEA------------ARRGLALRVEKLDLTDA   63 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHH------------HhcCCcceEEEeeCCCH
Confidence            56899999999999999999999986   6777887532  1 11111111            11124578889999985


Q ss_pred             CCCCChhHHHHHhc-cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE-EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~-~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S  152 (152)
                      +      ++.+.+. ++|++|||||....       .+.++..+++|+.++..+.+.+.+   ..+.++||++|
T Consensus        64 ~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~S  131 (257)
T PRK09291         64 I------DRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTS  131 (257)
T ss_pred             H------HHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence            4      5776665 89999999996531       345667889999998887766543   12447888876

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.3e-13  Score=97.95  Aligned_cols=120  Identities=14%  Similarity=0.158  Sum_probs=84.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |++++||||+|+||.+++++|++.|+   +|++++|+..  ...+...++..            ....++.++.+|++++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~---~Vi~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dl~~~   63 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGA---RLYLAARDVE--RLERLADDLRA------------RGAVAVSTHELDILDT   63 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCC---EEEEEeCCHH--HHHHHHHHHHH------------hcCCeEEEEecCCCCh
Confidence            47899999999999999999999986   6788888643  11111111110            1125788999999986


Q ss_pred             CCCCChhHHHHHhc----cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE----EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~----~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +      ++.++++    .+|++||++|....       .+++...+++|+.++.++++++.+.   .+.+++|++|
T Consensus        64 ~------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s  134 (243)
T PRK07102         64 A------SHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGIS  134 (243)
T ss_pred             H------HHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence            5      4554443    56999999986431       3445568899999999999887642   2446787765

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.55  E-value=7.1e-14  Score=99.75  Aligned_cols=108  Identities=18%  Similarity=0.162  Sum_probs=81.8

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      +..+++++++||||+|+||++++++|++.|+   .|++.+|+...     ..... .              ......+.+
T Consensus         9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~---~Vi~~~r~~~~-----~~~~~-~--------------~~~~~~~~~   65 (245)
T PRK12367          9 QSTWQGKRIGITGASGALGKALTKAFRAKGA---KVIGLTHSKIN-----NSESN-D--------------ESPNEWIKW   65 (245)
T ss_pred             HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEECCchh-----hhhhh-c--------------cCCCeEEEe
Confidence            4567889999999999999999999999986   67777876421     11100 0              011256788


Q ss_pred             ccCCCCCCCChhHHHHHhccccEEEecccccc----chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         85 DILQANLGIKDSDLLMLQEEVSVVFNGAASLK----LEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      |+++.+      ++...+.++|++|||||...    ..+++...+++|+.++.++++++.+
T Consensus        66 D~~~~~------~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  120 (245)
T PRK12367         66 ECGKEE------SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED  120 (245)
T ss_pred             eCCCHH------HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            998854      67777889999999999743    2466788999999999999998765

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.55  E-value=2.1e-13  Score=97.96  Aligned_cols=123  Identities=19%  Similarity=0.219  Sum_probs=86.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|+..  .+.+...++..           .....++.++.+|++
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~D~~   69 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGA---SVAICGRDEE--RLASAEARLRE-----------KFPGARLLAARCDVL   69 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH--HHHHHHHHHHh-----------hCCCceEEEEEecCC
Confidence            6789999999999999999999999986   6788888643  22222222111           001246778899999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++       +.++|++|||||....       .+.+...+++|+.++..+.+++.+.   .+.+++|+
T Consensus        70 ~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~  143 (265)
T PRK07062         70 DEA------DVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVC  143 (265)
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEE
Confidence            865      34333       3468999999996431       4467778999999998888877542   13457887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       144 is  145 (265)
T PRK07062        144 VN  145 (265)
T ss_pred             ec
Confidence            65

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.54  E-value=8.7e-14  Score=99.56  Aligned_cols=118  Identities=16%  Similarity=0.204  Sum_probs=84.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.+++++||||+|+||.+++++|+++|+   +|++++|+..      ....+..            .....+.++.+|++
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~   62 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGA---RVVIADIKPA------RARLAAL------------EIGPAAIAVSLDVT   62 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEcCCHH------HHHHHHH------------HhCCceEEEEccCC
Confidence            5678999999999999999999999986   6777777532      1111110            00135788899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM----KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v  149 (152)
                      +++      ++..++       .++|++||++|....       .+.++..+++|+.++.++++++.+.    ....++|
T Consensus        63 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv  136 (257)
T PRK07067         63 RQD------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKII  136 (257)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEE
Confidence            865      344333       368999999986531       4567778999999999999998642    1124687


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       137 ~~s  139 (257)
T PRK07067        137 NMA  139 (257)
T ss_pred             EeC
Confidence            765

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.5e-13  Score=97.68  Aligned_cols=123  Identities=20%  Similarity=0.202  Sum_probs=82.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..      .+.+...            ....++.++.+|++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~v~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~   62 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGA---RVAITGRDPA------SLEAARA------------ELGESALVIRADAG   62 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCHH------HHHHHHH------------HhCCceEEEEecCC
Confidence            5678999999999999999999999986   6777777532      1111110            01246778899998


Q ss_pred             CCCCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862         88 QANLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~  151 (152)
                      +.+.-.. .+.+.+...++|++||++|....       .+.+...+++|+.++.++++++.+. ....++|++
T Consensus        63 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~  135 (249)
T PRK06500         63 DVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLN  135 (249)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence            8541000 01122333478999999986432       3566778999999999999999752 122355544

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.54  E-value=1.4e-13  Score=98.48  Aligned_cols=125  Identities=9%  Similarity=0.010  Sum_probs=84.6

Q ss_pred             ccCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++++++||||+  ++||++++++|++.|+   +|++..|+.   ...+.++++.               ...+.++.+
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~---~Vi~~~r~~---~~~~~~~~~~---------------~~~~~~~~~   62 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGA---TVIYTYQND---RMKKSLQKLV---------------DEEDLLVEC   62 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCC---EEEEecCch---HHHHHHHhhc---------------cCceeEEeC
Confidence            3678999999999  7999999999999986   677777742   2222222221               135678899


Q ss_pred             ccCCCCCCCC-hhHHHHHhccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862         85 DILQANLGIK-DSDLLMLQEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI  151 (152)
Q Consensus        85 D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~  151 (152)
                      |+++++.--. .+.+.+.+.++|++|||||...           ..+.++..+++|+.++..+.+++.+. .+-.++|++
T Consensus        63 Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~i  142 (252)
T PRK06079         63 DVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTL  142 (252)
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEE
Confidence            9998651000 1112222346899999999642           13567778999999999999888753 122467665


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       143 s  143 (252)
T PRK06079        143 T  143 (252)
T ss_pred             e
Confidence            4

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=1.6e-13  Score=98.05  Aligned_cols=120  Identities=17%  Similarity=0.091  Sum_probs=83.8

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .++++||||+|+||++++++|++.|+   .|++++|+... ...+..+.+..             ...++.++.+|++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~---~vi~~~r~~~~-~~~~~~~~~~~-------------~~~~~~~~~~D~~~~   64 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGF---DLAINDRPDDE-ELAATQQELRA-------------LGVEVIFFPADVADL   64 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecCchh-HHHHHHHHHHh-------------cCCceEEEEecCCCH
Confidence            36899999999999999999999986   67777775431 11122222111             124688899999986


Q ss_pred             CCCCChhHHHHH-------hccccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc----CC-----
Q psy11862         90 NLGIKDSDLLML-------QEEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM----KK-----  144 (152)
Q Consensus        90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-----  144 (152)
                      .      ++.++       +.++|++||++|...         ..+.++..+++|+.++.++++++.+.    .+     
T Consensus        65 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  138 (256)
T PRK12745         65 S------AHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELP  138 (256)
T ss_pred             H------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCC
Confidence            5      33333       246899999998642         13667778999999999998887542    11     


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      .++||++|
T Consensus       139 ~~~iv~~s  146 (256)
T PRK12745        139 HRSIVFVS  146 (256)
T ss_pred             CcEEEEEC
Confidence            35678765

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.54  E-value=2e-13  Score=97.49  Aligned_cols=119  Identities=18%  Similarity=0.175  Sum_probs=83.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||+++++.|++.|+   .|++++|+..  ...+....+..             ...++.++.+|++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~---~Vi~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~~~   62 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA---NVVITGRTKE--KLEEAKLEIEQ-------------FPGQVLTVQMDVRNP   62 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEecCCCH
Confidence            47899999999999999999999986   6788887632  11111111110             124688899999986


Q ss_pred             CCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---C-CCcceEec
Q psy11862         90 NLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---K-KLVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~-~~~~~v~~  151 (152)
                      +      ++.++       +.++|++||++|...       ..+.+...+++|+.+++++++++.+.   . ..++++++
T Consensus        63 ~------~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~i  136 (252)
T PRK07677         63 E------DVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINM  136 (252)
T ss_pred             H------HHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence            5      34333       346899999998532       14557779999999999999998542   1 23578876


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       137 s  137 (252)
T PRK07677        137 V  137 (252)
T ss_pred             c
Confidence            5

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.54  E-value=3e-13  Score=95.80  Aligned_cols=122  Identities=20%  Similarity=0.263  Sum_probs=85.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|++|+++++.|++.|+   .|+++.|+... ...+....+..             ...++.++.+|++
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~---~v~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~Dl~   65 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGA---NVVINYASSEA-GAEALVAEIGA-------------LGGKALAVQGDVS   65 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCchh-HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence            5678999999999999999999999987   56666665331 11111111111             1256888899998


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++||++|....       .+.+...+.+|+.++.++++++.+.   .+.++|++
T Consensus        66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~  139 (248)
T PRK05557         66 DAE------SVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIIN  139 (248)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence            865      343333       368999999986432       3456678899999999999888753   13457887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       140 is  141 (248)
T PRK05557        140 IS  141 (248)
T ss_pred             Ec
Confidence            75

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.54  E-value=3e-13  Score=96.73  Aligned_cols=119  Identities=13%  Similarity=0.164  Sum_probs=84.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|+||.+++++|++.|+   .|+..++...    .+..+.+..             ...++.++.+|++
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~---~vv~~~~~~~----~~~~~~~~~-------------~~~~~~~~~~Dl~   67 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGC---DIVGINIVEP----TETIEQVTA-------------LGRRFLSLTADLR   67 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEecCcch----HHHHHHHHh-------------cCCeEEEEECCCC
Confidence            6789999999999999999999999987   5566555321    222222211             1246788899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v  149 (152)
                      +++      ++.+++       .++|++|||||....       .+++...+++|+.++.++++++.+.   .+ ..++|
T Consensus        68 ~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv  141 (253)
T PRK08993         68 KID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKII  141 (253)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEE
Confidence            854      344333       368999999997531       4678889999999999999987642   11 25677


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       142 ~is  144 (253)
T PRK08993        142 NIA  144 (253)
T ss_pred             EEC
Confidence            765

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.5e-13  Score=100.03  Aligned_cols=112  Identities=22%  Similarity=0.205  Sum_probs=79.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC-------CCCHHHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR-------GLTPKARLAEFSKLPVFERLRKECPAQLSRL   79 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (152)
                      .+++++++||||+++||.+++++|++.|+   +|++.+|+..       .....+...++..             ...++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~---~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-------------~~~~~   66 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSASGGSAAQAVVDEIVA-------------AGGEA   66 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEeeCCccccccccchhHHHHHHHHHHh-------------cCCce
Confidence            36789999999999999999999999986   5666666431       0111222222211             12467


Q ss_pred             EEEEcccCCCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHH
Q psy11862         80 HIIEGDILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIAL  140 (152)
Q Consensus        80 ~~~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~  140 (152)
                      .++.+|+++++      ++.++       +.++|++|||||...       ..+.+...+++|+.+++.+.+++.
T Consensus        67 ~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  135 (286)
T PRK07791         67 VANGDDIADWD------GAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA  135 (286)
T ss_pred             EEEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence            78899999865      33333       347899999999753       146678899999999999988875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.54  E-value=1.9e-13  Score=98.14  Aligned_cols=120  Identities=10%  Similarity=0.069  Sum_probs=83.4

Q ss_pred             cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+  ++||.+++++|+++|+   +|++..|+..   ..+.+.++...             .....++.+|
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~---~v~l~~r~~~---~~~~~~~~~~~-------------~~~~~~~~~D   68 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGA---ELAVTYLNDK---ARPYVEPLAEE-------------LDAPIFLPLD   68 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCChh---hHHHHHHHHHh-------------hccceEEecC
Confidence            688999999998  5999999999999986   6677777532   12223322110             1234578899


Q ss_pred             cCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862         86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~  146 (152)
                      +++++      ++.++       +.++|++|||||...           ..+.++..+++|+.++..+.+++.+. ..-.
T Consensus        69 ~~~~~------~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g  142 (258)
T PRK07533         69 VREPG------QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGG  142 (258)
T ss_pred             cCCHH------HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCC
Confidence            99865      34333       346899999998642           13567889999999999999987653 1224


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       143 ~Ii~is  148 (258)
T PRK07533        143 SLLTMS  148 (258)
T ss_pred             EEEEEe
Confidence            666654

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.6e-13  Score=97.27  Aligned_cols=120  Identities=13%  Similarity=0.067  Sum_probs=84.7

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++++++||||+|++|.+++++|+++|+   +|++++|++.  ...+....+.             ....++.++.+|+++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~-------------~~~~~~~~~~~D~~~   66 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW---DLALVARSQD--ALEALAAELR-------------STGVKAAAYSIDLSN   66 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHH-------------hCCCcEEEEEccCCC
Confidence            468999999999999999999999986   6788888642  1111111111             112468889999998


Q ss_pred             CCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         89 ANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        89 ~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      ++      ++..++       .++|++||++|....       .+.++..+++|+.++.++++++.+.   .+.+++|++
T Consensus        67 ~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i  140 (241)
T PRK07454         67 PE------AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINV  140 (241)
T ss_pred             HH------HHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            65      343333       368999999986431       3466778999999999988887431   234678877


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       141 s  141 (241)
T PRK07454        141 S  141 (241)
T ss_pred             c
Confidence            5

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.53  E-value=2.3e-13  Score=97.10  Aligned_cols=128  Identities=16%  Similarity=0.146  Sum_probs=81.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|++.|+   .|++..++.. ....+...++..             ....+..+.+|++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~   64 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGA---LVAIHYGNRK-EEAEETVYEIQS-------------NGGSAFSIGANLE   64 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC---eEEEEcCCCH-HHHHHHHHHHHh-------------cCCceEEEecccC
Confidence            4679999999999999999999999986   4555443211 111111111111             1245677889998


Q ss_pred             CCCCCCC-hhHHHHH----h--ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         88 QANLGIK-DSDLLML----Q--EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~-~~~~~~~----~--~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      +.+.-.. .+++.+.    +  .++|++||+||....       .+.++.++++|+.+++.+++++.+. ....++|++|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~is  144 (252)
T PRK12747         65 SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINIS  144 (252)
T ss_pred             CHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEEC
Confidence            8541000 0111111    1  268999999996431       3457788999999999999888753 1235788875

>PRK09242 tropinone reductase; Provisional

Probab=99.53  E-value=2.3e-13  Score=97.41  Aligned_cols=129  Identities=17%  Similarity=0.157  Sum_probs=87.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|+++|+   +|++++|+..  ...+...++..         .  ....++.++.+|++
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~---~v~~~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~~~~Dl~   70 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGA---DVLIVARDAD--ALAQARDELAE---------E--FPEREVHGLAADVS   70 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh---------h--CCCCeEEEEECCCC
Confidence            6789999999999999999999999986   6788887532  22222222111         0  01246888999999


Q ss_pred             CCCCCCC-hhHHHHHhccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862         88 QANLGIK-DSDLLMLQEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S  152 (152)
                      +++.-.. .+.+.+.+.++|++||++|...       ..+++...+++|+.++..+++++.+   ..+.+++|++|
T Consensus        71 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~s  146 (257)
T PRK09242         71 DDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIG  146 (257)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence            8641000 1112233447899999999632       2466777899999999999988754   12346788875

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.53  E-value=2.7e-13  Score=96.17  Aligned_cols=121  Identities=23%  Similarity=0.328  Sum_probs=84.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +.+++++||||+|+||+++++.|++.|+   +++++ +|+..  ...+....+..             ...++.++.+|+
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~---~v~~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~   64 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGA---KVVIAYDINEE--AAQELLEEIKE-------------EGGDAIAVKADV   64 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHHh-------------cCCeEEEEECCC
Confidence            5578999999999999999999999986   55666 66532  11111111111             124688899999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+.+.       ++|++||++|....       .+.++..+++|+.++.++++++...   .+.+++|
T Consensus        65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v  138 (247)
T PRK05565         65 SSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIV  138 (247)
T ss_pred             CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            9865      4444433       78999999997531       3456778999999999998887642   2345688


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       139 ~~s  141 (247)
T PRK05565        139 NIS  141 (247)
T ss_pred             EEC
Confidence            765

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.53  E-value=2.3e-13  Score=97.30  Aligned_cols=121  Identities=16%  Similarity=0.127  Sum_probs=84.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   .+++.+|+..  . .+.+.....            ....++.++.+|++
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~---~vv~~~r~~~--~-~~~~~~~l~------------~~~~~~~~~~~D~~   70 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINAD--A-ANHVVDEIQ------------QLGGQAFACRCDIT   70 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCHH--H-HHHHHHHHH------------hcCCcEEEEEccCC
Confidence            5789999999999999999999999986   5677776532  1 111111100            01246778899999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +.+      ++.++       +.++|++||++|....      .+.+...+++|+.++.++++++...   .+..++|++
T Consensus        71 ~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i  144 (255)
T PRK06113         71 SEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI  144 (255)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEE
Confidence            864      34333       2468999999996432      3566778999999999999998642   133578877


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       145 s  145 (255)
T PRK06113        145 T  145 (255)
T ss_pred             e
Confidence            5

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.53  E-value=2.2e-13  Score=98.20  Aligned_cols=118  Identities=15%  Similarity=0.118  Sum_probs=83.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|++.|+   +|++.+|+..  ...+....+..             ...++.++.+|+++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~D~~~~~   62 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW---RLALADVNEE--GGEETLKLLRE-------------AGGDGFYQRCDVRDYS   62 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEccCCCHH
Confidence            4799999999999999999999986   6777777543  22222222211             1256788999998854


Q ss_pred             CCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S  152 (152)
                            ++..++       .++|++||++|....       .+.++..+++|+.++..+.+.+.+   ..+.+++|++|
T Consensus        63 ------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vs  135 (270)
T PRK05650         63 ------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIA  135 (270)
T ss_pred             ------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence                  344333       368999999997532       356677899999999988777642   12456888775

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.53  E-value=2.5e-13  Score=98.17  Aligned_cols=123  Identities=20%  Similarity=0.190  Sum_probs=85.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++|||++|+||.++++.|+++|+   .|++++|+..  ...+....+..         .  ....++.++.+|++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~~~~Dl~   68 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA---AVMIVGRNPD--KLAAAAEEIEA---------L--KGAGAVRYEPADVT   68 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCHH--HHHHHHHHHHh---------c--cCCCceEEEEcCCC
Confidence            6789999999999999999999999987   6777887532  11111111110         0  01246788899998


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      ++.++++       ++|++||++|...        ..+.+...+++|+.++..+++++.+.   .+.++|+
T Consensus        69 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv  142 (276)
T PRK05875         69 DED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFV  142 (276)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            864      4444433       6899999998542        13446678899999999998877542   1335788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       143 ~~s  145 (276)
T PRK05875        143 GIS  145 (276)
T ss_pred             EEe
Confidence            765

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.53  E-value=3.1e-13  Score=98.65  Aligned_cols=123  Identities=15%  Similarity=0.171  Sum_probs=86.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++.+|+...  ..+.+.....            ....++.++.+|+
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~---~V~l~~r~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dl  105 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGA---DIAIVYLDEHE--DANETKQRVE------------KEGVKCLLIPGDV  105 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcch--HHHHHHHHHH------------hcCCeEEEEEccC
Confidence            45678999999999999999999999986   66777775431  1122211111            0124678899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEe
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLD  150 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~  150 (152)
                      ++.+      ++..++       .++|++||+||....        .+.+...+++|+.++.++++++.+. ....++|+
T Consensus       106 ~~~~------~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~  179 (290)
T PRK06701        106 SDEA------FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIIN  179 (290)
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEE
Confidence            8855      343333       368999999986421        3456778999999999999998753 12257887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       180 is  181 (290)
T PRK06701        180 TG  181 (290)
T ss_pred             Ee
Confidence            65

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.53  E-value=3e-13  Score=95.95  Aligned_cols=122  Identities=17%  Similarity=0.183  Sum_probs=87.3

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |+.+.+ +++++++|||++|++|.++++.|+++|+   +|++++|+..      .+.++..              .....
T Consensus         1 ~~~~~~-~~~~~~lItGa~g~iG~~~a~~l~~~g~---~V~~~~r~~~------~~~~~~~--------------~~~~~   56 (245)
T PRK07060          1 MNMAFD-FSGKSVLVTGASSGIGRACAVALAQRGA---RVVAAARNAA------ALDRLAG--------------ETGCE   56 (245)
T ss_pred             CCcccc-cCCCEEEEeCCcchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH--------------HhCCe
Confidence            555555 6789999999999999999999999986   6788887532      1211111              01345


Q ss_pred             EEEcccCCCCCCCChhHHHHHhc---cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-Cc
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQE---EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LV  146 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~  146 (152)
                      ++.+|+++..      ++.+.++   ++|++||++|....       ..+++..+.+|+.++..+++++.+.   .+ .+
T Consensus        57 ~~~~D~~~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  130 (245)
T PRK07060         57 PLRLDVGDDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGG  130 (245)
T ss_pred             EEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCc
Confidence            6789998854      4555544   58999999997532       3456778899999999999988652   11 35


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      +||++|
T Consensus       131 ~iv~~s  136 (245)
T PRK07060        131 SIVNVS  136 (245)
T ss_pred             EEEEEc
Confidence            788875

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.6e-13  Score=98.26  Aligned_cols=118  Identities=19%  Similarity=0.213  Sum_probs=81.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||.++++.|++.|+   +|++++|+..      .+.++..         .... ..++.++.+|++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~---~v~~~~r~~~------~~~~~~~---------~~~~-~~~~~~~~~Dl~~~   62 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA---TLGLVARRTD------ALQAFAA---------RLPK-AARVSVYAADVRDA   62 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH---------hccc-CCeeEEEEcCCCCH
Confidence            47899999999999999999999986   6778887532      2221111         0011 12688899999986


Q ss_pred             CCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +      ++.+++       ..+|++||++|....        .+.+...+++|+.++.+++++....   .+.+++|++
T Consensus        63 ~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~i  136 (257)
T PRK07024         63 D------ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGI  136 (257)
T ss_pred             H------HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            5      444433       347999999996431        2456778999999999988865421   234677766


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       137 s  137 (257)
T PRK07024        137 A  137 (257)
T ss_pred             e
Confidence            4

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.53  E-value=4.5e-13  Score=95.95  Aligned_cols=125  Identities=14%  Similarity=0.155  Sum_probs=82.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      =++++++||||+|+||++++++|+++| +   +|++.+|+... ...+..+++...            ...++.++.+|+
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~---~V~~~~r~~~~-~~~~~~~~l~~~------------~~~~v~~~~~D~   69 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPA---RVVLAALPDDP-RRDAAVAQMKAA------------GASSVEVIDFDA   69 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCC---eEEEEeCCcch-hHHHHHHHHHhc------------CCCceEEEEecC
Confidence            367899999999999999999999985 4   77888886541 122222222111            123688999999


Q ss_pred             CCCCCCCChhH-HHHHh--ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHH----HhcCCCcceEecC
Q psy11862         87 LQANLGIKDSD-LLMLQ--EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIA----LKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~-~~~~~--~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~S  152 (152)
                      ++++.   .++ ++...  .++|++||++|....       ..+..+.+++|+.++..+.+.+    .+. +.++||++|
T Consensus        70 ~~~~~---~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~is  145 (253)
T PRK07904         70 LDTDS---HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMS  145 (253)
T ss_pred             CChHH---HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEe
Confidence            88651   111 22222  379999999987532       1122346899999988865554    333 457888875

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.53  E-value=2.2e-13  Score=96.64  Aligned_cols=122  Identities=17%  Similarity=0.212  Sum_probs=84.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|+++|+   ++++..|+.. ....+..+++..             ...++.++.+|++
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~Dl~   65 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGF---AVAVNYAGSA-AAADELVAEIEA-------------AGGRAIAVQADVA   65 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCCH-HHHHHHHHHHHh-------------cCCeEEEEECCCC
Confidence            4678999999999999999999999987   4555555432 111111122111             1256888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      +++      ++.+.+       .++|++||+||...       ..+.++..+++|+.++.++++++.+. ...+++|++|
T Consensus        66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s  139 (245)
T PRK12937         66 DAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLS  139 (245)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEe
Confidence            854      444444       36899999999653       14567778999999999999888653 1224777765

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.52  E-value=2.7e-13  Score=95.59  Aligned_cols=110  Identities=19%  Similarity=0.145  Sum_probs=81.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++||||+|++|.+++++|++.|+   +|++++|+....                          ....++.+|++
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~---~v~~~~r~~~~~--------------------------~~~~~~~~D~~   51 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGH---QVIGIARSAIDD--------------------------FPGELFACDLA   51 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCcccc--------------------------cCceEEEeeCC
Confidence            3568999999999999999999999986   778888865310                          11246789998


Q ss_pred             CCCCCCChhHHHHHhc------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQE------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      ++.+.+.      ++|++||++|....       .+.+...+++|+.++.++.+++.+.   .+.+++|++
T Consensus        52 ~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~  125 (234)
T PRK07577         52 DIE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNI  125 (234)
T ss_pred             CHH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence            864      3444443      68999999997542       3456668999999999988877541   245688877


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       126 s  126 (234)
T PRK07577        126 C  126 (234)
T ss_pred             c
Confidence            5

>PRK05865 hypothetical protein; Provisional

Probab=99.52  E-value=1.2e-13  Score=112.27  Aligned_cols=102  Identities=23%  Similarity=0.173  Sum_probs=82.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|++.|+   .|++++|+....                        ....+.++.+|+.+..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~---~Vv~l~R~~~~~------------------------~~~~v~~v~gDL~D~~   53 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGH---EVVGIARHRPDS------------------------WPSSADFIAADIRDAT   53 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCchhh------------------------cccCceEEEeeCCCHH
Confidence            4799999999999999999999987   677788753210                        0135678899998854


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++.++++++|+|||+|+....      .+++|+.++.++++++.+. ++++||++|
T Consensus        54 ------~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iS  102 (854)
T PRK05865         54 ------AVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTS  102 (854)
T ss_pred             ------HHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEEC
Confidence                  688888899999999986431      4688999999999999987 678999987

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.52  E-value=1.2e-13  Score=98.75  Aligned_cols=119  Identities=19%  Similarity=0.171  Sum_probs=86.3

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+...+++++||||+|++|++++++|++.|+   .|+++.|+...      ......             ...++.++.+
T Consensus        12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~---~V~~~~R~~~~------~~~~~~-------------~~~~~~~~~~   69 (251)
T PLN00141         12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGF---AVKAGVRDVDK------AKTSLP-------------QDPSLQIVRA   69 (251)
T ss_pred             cccccCCeEEEECCCcHHHHHHHHHHHhCCC---EEEEEecCHHH------HHHhcc-------------cCCceEEEEe
Confidence            3456788999999999999999999999987   67788876431      111100             0246888999


Q ss_pred             ccCCCCCCCChhHHHHHh-ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         85 DILQANLGIKDSDLLMLQ-EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~-~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      |+++..     .++.+.+ .++|+||+++|...... ....+++|+.++.++++++.+. +.++||++|
T Consensus        70 Dl~d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~-~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iS  131 (251)
T PLN00141         70 DVTEGS-----DKLVEAIGDDSDAVICATGFRRSFD-PFAPWKVDNFGTVNLVEACRKA-GVTRFILVS  131 (251)
T ss_pred             eCCCCH-----HHHHHHhhcCCCEEEECCCCCcCCC-CCCceeeehHHHHHHHHHHHHc-CCCEEEEEc
Confidence            998742     2466666 58999999988643211 2223578888999999999886 678999986

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.52  E-value=3.1e-13  Score=96.99  Aligned_cols=126  Identities=13%  Similarity=0.087  Sum_probs=84.0

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      ...+++++++||||+++||++++++|++.|+   .|++..|+.. ..+.+....+..            ....++.++.+
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~   66 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGV---NIAFTYNSNV-EEANKIAEDLEQ------------KYGIKAKAYPL   66 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCH-HHHHHHHHHHHH------------hcCCceEEEEc
Confidence            3457899999999999999999999999986   5565554321 111111111111            01257889999


Q ss_pred             ccCCCCCCCChhHHHHH-------hccccEEEecccccc-------------chhhHHHHHHhhhHHHHHHHHHHHhc--
Q psy11862         85 DILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------------LEAELKENVAANTRGTQRLLDIALKM--  142 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~--  142 (152)
                      |+++++      ++.++       +.++|++|||||...             ....+...+++|+.+...+.+.+.+.  
T Consensus        67 D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  140 (260)
T PRK08416         67 NILEPE------TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRME  140 (260)
T ss_pred             CCCCHH------HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhh
Confidence            999865      34333       346899999997531             13456668899999888877776542  


Q ss_pred             -CCCcceEecC
Q psy11862        143 -KKLVVSLDIG  152 (152)
Q Consensus       143 -~~~~~~v~~S  152 (152)
                       .+.+++|++|
T Consensus       141 ~~~~g~iv~is  151 (260)
T PRK08416        141 KVGGGSIISLS  151 (260)
T ss_pred             ccCCEEEEEEe
Confidence             1335788775

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.52  E-value=1.5e-13  Score=98.74  Aligned_cols=124  Identities=18%  Similarity=0.216  Sum_probs=83.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..      .++++..            ....++..+.+|++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~l~~------------~~~~~~~~~~~D~~   61 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGA---RVAVLDKSAA------GLQELEA------------AHGDAVVGVEGDVR   61 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHh------------hcCCceEEEEeccC
Confidence            5689999999999999999999999996   6777777532      2222211            01245778899998


Q ss_pred             CCCCCCC-hhHHHHHhccccEEEeccccccc-------h-----hhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         88 QANLGIK-DSDLLMLQEEVSVVFNGAASLKL-------E-----AELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~-----~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +.+.-.. .+++.+.+.++|++|||||....       +     +.++..+++|+.++..+++++.+.  ...+++|++|
T Consensus        62 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~s  141 (262)
T TIGR03325        62 SLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTI  141 (262)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEe
Confidence            8541000 01122223478999999986321       1     257788999999999999998753  1224666653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.52  E-value=4e-13  Score=95.80  Aligned_cols=121  Identities=17%  Similarity=0.165  Sum_probs=84.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|++.|+   +|++++|+..  ...+..+++..             ....+.++.+|++
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~---~Vi~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   67 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGA---HVIVSSRKLD--GCQAVADAIVA-------------AGGKAEALACHIG   67 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEcCCC
Confidence            6789999999999999999999999986   6788887532  22222222111             1245778899998


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +.+      ++..+       +.++|++||++|...        ..+.+...+++|+.++..+++++.+.   .+.++++
T Consensus        68 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv  141 (252)
T PRK07035         68 EME------QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIV  141 (252)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEE
Confidence            864      33333       346899999998532        14556678999999999988887532   2346777


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       142 ~~s  144 (252)
T PRK07035        142 NVA  144 (252)
T ss_pred             EEC
Confidence            765

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.52  E-value=3.1e-13  Score=96.96  Aligned_cols=119  Identities=16%  Similarity=0.191  Sum_probs=82.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||.++++.|++.|+   +|++++|+..  ...+..+.+..             ....+.++.+|++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~---~Vi~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~   62 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA---QLVLAARNET--RLASLAQELAD-------------HGGEALVVPTDVSDA   62 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEccCCCH
Confidence            46899999999999999999999986   6778887532  11221222111             124688889999986


Q ss_pred             CCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +      ++..++       .++|++||++|....        .+.+.+.+++|+.++.++++.+.+.  .+.+++|++|
T Consensus        63 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~s  136 (263)
T PRK06181         63 E------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVS  136 (263)
T ss_pred             H------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence            5      344443       368999999986432        2335667999999999999998642  1335777654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=5.9e-13  Score=94.75  Aligned_cols=131  Identities=19%  Similarity=0.135  Sum_probs=85.9

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+.+++++++|||++|+||.+++++|++.|+   .|++++|+..  ...+...++..            ....++.++.+
T Consensus         7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~---~Vi~~~r~~~--~~~~~~~~l~~------------~~~~~~~~~~~   69 (247)
T PRK08945          7 PDLLKDRIILVTGAGDGIGREAALTYARHGA---TVILLGRTEE--KLEAVYDEIEA------------AGGPQPAIIPL   69 (247)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCC---cEEEEeCCHH--HHHHHHHHHHh------------cCCCCceEEEe
Confidence            3467899999999999999999999999986   6788888642  11111111111            01235667778


Q ss_pred             ccCCCCC-CCC--hhHHHHHhccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862         85 DILQANL-GIK--DSDLLMLQEEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALK---MKKLVVSLD  150 (152)
Q Consensus        85 D~~~~~~-~~~--~~~~~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~  150 (152)
                      |+++... .+.  .+.+.+.+.++|++||+||....        .+.+...+++|+.++.++++++.+   ..+.++||+
T Consensus        70 d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~  149 (247)
T PRK08945         70 DLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVF  149 (247)
T ss_pred             cccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            8864220 000  01233333478999999986421        356777899999999999888753   124568887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       150 ~s  151 (247)
T PRK08945        150 TS  151 (247)
T ss_pred             Ec
Confidence            65

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.51  E-value=3.9e-13  Score=96.26  Aligned_cols=112  Identities=18%  Similarity=0.229  Sum_probs=78.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC-C-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR-G-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+|+||.++++.|++.|+   +++++.++.. . ....+..+.+..             ...++.++.+|
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~---~vv~i~~~~~~~~~~~~~~~~~l~~-------------~~~~~~~~~~D   69 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGA---KAVAIHYNSAASKADAEETVAAVKA-------------AGAKAVAFQAD   69 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC---cEEEEecCCccchHHHHHHHHHHHH-------------hCCcEEEEecC
Confidence            5679999999999999999999999987   4445554322 1 111111111111             12467889999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      +++++      ++.+++       .++|++||+||...       ..+.+...+++|+.++..+++++.+
T Consensus        70 ~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  133 (257)
T PRK12744         70 LTTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGR  133 (257)
T ss_pred             cCCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            99865      444433       36899999999632       1445777899999999999999875

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.51  E-value=4.8e-13  Score=94.43  Aligned_cols=113  Identities=19%  Similarity=0.208  Sum_probs=85.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|+||.++++.|++.|+   .|++++|+....                        ...++.++.+|++
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~~------------------------~~~~~~~~~~D~~   55 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGA---QVYGVDKQDKPD------------------------LSGNFHFLQLDLS   55 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCC---EEEEEeCCcccc------------------------cCCcEEEEECChH
Confidence            5678999999999999999999999986   677777754311                        0145778899998


Q ss_pred             CCCCCCChhHHHHHhccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      ++     .+++.+.+.++|++||++|...        ..++++..+++|+.++.++++++.+.   .+.+++|++|
T Consensus        56 ~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s  126 (235)
T PRK06550         56 DD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMC  126 (235)
T ss_pred             HH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence            75     2345555678999999998532        14567778999999999999988642   2345788765

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.51  E-value=7.8e-13  Score=97.23  Aligned_cols=129  Identities=18%  Similarity=0.150  Sum_probs=85.3

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC----HHHHHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT----PKARLAEFSKLPVFERLRKECPAQLSRLHI   81 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (152)
                      ..+++++++||||+++||.+++++|++.|+   +|++.+|+.....    ..+.+.....     .+    .....++.+
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~-----~l----~~~~~~~~~   71 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGA---TVYVTGRSTRARRSEYDRPETIEETAE-----LV----TAAGGRGIA   71 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecccccccccccccchHHHHHH-----HH----HhcCCceEE
Confidence            347889999999999999999999999986   6777888642110    0111111100     00    011245778


Q ss_pred             EEcccCCCCCCCChhHHHHH-------hccccEEEecc-ccc------c-----chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         82 IEGDILQANLGIKDSDLLML-------QEEVSVVFNGA-ASL------K-----LEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        82 ~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a-~~~------~-----~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      +.+|+++++      ++.++       +.++|++|||| |..      .     ..+.+.+.+++|+.+++.+.+++.+.
T Consensus        72 ~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~  145 (305)
T PRK08303         72 VQVDHLVPE------QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPL  145 (305)
T ss_pred             EEcCCCCHH------HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            899999865      34333       34689999999 632      1     13456678899999999988887652


Q ss_pred             ---CCCcceEecC
Q psy11862        143 ---KKLVVSLDIG  152 (152)
Q Consensus       143 ---~~~~~~v~~S  152 (152)
                         .+..++|++|
T Consensus       146 m~~~~~g~IV~is  158 (305)
T PRK08303        146 LIRRPGGLVVEIT  158 (305)
T ss_pred             hhhCCCcEEEEEC
Confidence               1235777764

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.51  E-value=5.3e-13  Score=95.66  Aligned_cols=121  Identities=18%  Similarity=0.217  Sum_probs=84.7

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|++|++++++|+++|+   .|++++|+..  . .+.+....            .  ..++.++.+|
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~---~V~~~~r~~~--~-~~~~~~~~------------~--~~~~~~~~~D   66 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA---RVHVCDVSEA--A-LAATAARL------------P--GAKVTATVAD   66 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHH------------h--cCceEEEEcc
Confidence            347789999999999999999999999987   6788888543  1 11111110            0  1256888999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC-c
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKL-V  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~  146 (152)
                      +++++      ++..++       .++|+|||++|...        ..+.+...+++|+.++..+++++.+.   .+. +
T Consensus        67 ~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  140 (264)
T PRK12829         67 VADPA------QVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGG  140 (264)
T ss_pred             CCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCe
Confidence            99865      344333       47899999999762        14566788999999999998887431   123 4


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      +++++|
T Consensus       141 ~vv~~s  146 (264)
T PRK12829        141 VIIALS  146 (264)
T ss_pred             EEEEec
Confidence            566654

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.51  E-value=4.9e-13  Score=96.64  Aligned_cols=113  Identities=15%  Similarity=0.210  Sum_probs=81.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|++|.++++.|++.|+   .|++++|+..      .+..+..               ..+.++.+|++++
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~~---------------~~~~~~~~Dl~~~   56 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGY---EVWATARKAE------DVEALAA---------------AGFTAVQLDVNDG   56 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH---------------CCCeEEEeeCCCH
Confidence            47899999999999999999999986   6788887532      1222111               2456788999885


Q ss_pred             CCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +      ++.+++       .++|++||+||...       ..+.+...+++|+.++.++++++.+.  .+.+++|++|
T Consensus        57 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~is  129 (274)
T PRK05693         57 A------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIG  129 (274)
T ss_pred             H------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEEC
Confidence            4      344333       46899999999643       13567778999999999999987542  1235677654

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.51  E-value=3.6e-13  Score=96.71  Aligned_cols=120  Identities=18%  Similarity=0.275  Sum_probs=84.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|+++|+   .|++++|+..  ...+...++ .             ...++.++.+|++
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~-~-------------~~~~~~~~~~D~~   63 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGA---RLLLVGRNAE--KLEALAARL-P-------------YPGRHRWVVADLT   63 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHH-h-------------cCCceEEEEccCC
Confidence            4678999999999999999999999986   6788888532  111111111 0             1257888999999


Q ss_pred             CCCCCCChhHHHHH------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLML------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      ++..+      ..++|++||+||....       .+.++..+++|+.++.++++.+.+.   .+.+++|++
T Consensus        64 d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i  137 (263)
T PRK09072         64 SEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNV  137 (263)
T ss_pred             CHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence            865      33333      2468999999997532       3456778999999999999888642   123566665


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       138 s  138 (263)
T PRK09072        138 G  138 (263)
T ss_pred             c
Confidence            4

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.51  E-value=3.3e-13  Score=99.22  Aligned_cols=112  Identities=22%  Similarity=0.176  Sum_probs=80.9

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||++++++|+++|+   +|++.++.... ...+..+++..             ...++.++.+|
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga---~Vv~~~~~~~~-~~~~~~~~i~~-------------~g~~~~~~~~D   70 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGA---TVVVNDVASAL-DASDVLDEIRA-------------AGAKAVAVAGD   70 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCchh-HHHHHHHHHHh-------------cCCeEEEEeCC
Confidence            347889999999999999999999999986   66666664221 11222222211             13568889999


Q ss_pred             cCCCCCCCChhHHHHH------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHH
Q psy11862         86 ILQANLGIKDSDLLML------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIAL  140 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~  140 (152)
                      +++++      ++.++      +.++|++|||||....       .++++..+++|+.++.++++++.
T Consensus        71 v~d~~------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~  132 (306)
T PRK07792         71 ISQRA------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAA  132 (306)
T ss_pred             CCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence            99865      33333      3578999999997542       45677789999999999998875

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.51  E-value=3.7e-13  Score=96.64  Aligned_cols=123  Identities=11%  Similarity=0.081  Sum_probs=84.7

Q ss_pred             cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+  ++||++++++|++.|+   +|++..|+.......+.++++...             .....++.+|
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~---~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D   67 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGA---ELGITYLPDEKGRFEKKVRELTEP-------------LNPSLFLPCD   67 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCC---EEEEEecCcccchHHHHHHHHHhc-------------cCcceEeecC
Confidence            578999999986  8999999999999997   555555543322233334333211             1346678899


Q ss_pred             cCCCCCCCChhHHHHH-------hccccEEEecccccc-------c----hhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862         86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------L----EAELKENVAANTRGTQRLLDIALKM-KKLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~  146 (152)
                      +++++      ++.++       +.++|++|||||...       .    .+.|+..+++|+.++..+.+++.+. ..-+
T Consensus        68 l~d~~------~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g  141 (258)
T PRK07370         68 VQDDA------QIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG  141 (258)
T ss_pred             cCCHH------HHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC
Confidence            99865      34333       346899999999642       1    3567778999999999999987652 1225


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       142 ~Iv~is  147 (258)
T PRK07370        142 SIVTLT  147 (258)
T ss_pred             eEEEEe
Confidence            777764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.51  E-value=3.4e-13  Score=95.92  Aligned_cols=121  Identities=12%  Similarity=0.061  Sum_probs=83.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|+++|+   +|++.+|+..  ...+....+..           ......+.++.+|++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~---~v~~~~r~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~D~~~~   65 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR---DLALCARRTD--RLEELKAELLA-----------RYPGIKVAVAALDVNDH   65 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh-----------hCCCceEEEEEcCCCCH
Confidence            57899999999999999999999985   6778888642  11111111110           00124688899999986


Q ss_pred             CCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         90 NLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +      ++.++       +.++|++||+||....       .+.+...+++|+.++..+++++.+.   .+.+++|++|
T Consensus        66 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s  139 (248)
T PRK08251         66 D------QVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLIS  139 (248)
T ss_pred             H------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            4      34333       3478999999986532       3445668899999999998887531   2456788765

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.51  E-value=4.5e-13  Score=95.11  Aligned_cols=115  Identities=15%  Similarity=0.061  Sum_probs=83.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||.+++++|+++|+   +|++++|++.      .++++...             ..++.++.+|++++
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~---~V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~~~   58 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGW---QVIACGRNQS------VLDELHTQ-------------SANIFTLAFDVTDH   58 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCC---EEEEEECCHH------HHHHHHHh-------------cCCCeEEEeeCCCH
Confidence            36899999999999999999999986   6788888532      22222111             14577889999985


Q ss_pred             CCCCChhHHHHHhc----cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE----EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~----~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      +      ++.++++    .+|.++|++|...       ..+.++.++++|+.++.++++++.+. .+.+++|++|
T Consensus        59 ~------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~is  127 (240)
T PRK06101         59 P------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVG  127 (240)
T ss_pred             H------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEe
Confidence            4      5666655    3689999998532       13456778999999999999998763 1234677654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.50  E-value=3.2e-13  Score=97.82  Aligned_cols=120  Identities=11%  Similarity=0.101  Sum_probs=84.1

Q ss_pred             cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++|+++||||+  ++||+++++.|++.|+   +|++..|+.   ...+.++++...         .   ... ..+.+|
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~---~Vil~~r~~---~~~~~~~~~~~~---------~---~~~-~~~~~D   63 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGA---ELAFTYLNE---ALKKRVEPIAQE---------L---GSD-YVYELD   63 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEecCH---HHHHHHHHHHHh---------c---CCc-eEEEec
Confidence            568999999997  8999999999999986   667777752   122333332110         0   122 568899


Q ss_pred             cCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862         86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~  146 (152)
                      ++|++      ++.++       +.++|++|||||...           ..+.++..+++|+.+++.+.+++.+. ..-.
T Consensus        64 v~d~~------~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g  137 (274)
T PRK08415         64 VSKPE------HFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGA  137 (274)
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCC
Confidence            99965      33333       346899999999642           14567889999999999999988753 1225


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       138 ~Iv~is  143 (274)
T PRK08415        138 SVLTLS  143 (274)
T ss_pred             cEEEEe
Confidence            777765

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.50  E-value=2.5e-13  Score=97.55  Aligned_cols=118  Identities=20%  Similarity=0.238  Sum_probs=82.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||.+++++|++.|+   .|++.+|+..      .++.+..            ....++.++.+|++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~   62 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGA---RVAVLERSAE------KLASLRQ------------RFGDHVLVVEGDVT   62 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH------------HhCCcceEEEccCC
Confidence            5789999999999999999999999987   5777887532      1222111            01245778899999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEeccccccc--------hh----hHHHHHHhhhHHHHHHHHHHHhc--CCCc
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL--------EA----ELKENVAANTRGTQRLLDIALKM--KKLV  146 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~--------~~----~~~~~~~~n~~~~~~l~~~~~~~--~~~~  146 (152)
                      +++      ++..+       +.++|++||+||....        .+    .++.++++|+.++..+++++.+.  ....
T Consensus        63 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g  136 (263)
T PRK06200         63 SYA------DNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGG  136 (263)
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCC
Confidence            864      33333       3468999999996421        11    26678899999999999888642  1224


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       137 ~iv~~s  142 (263)
T PRK06200        137 SMIFTL  142 (263)
T ss_pred             EEEEEC
Confidence            677664

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.50  E-value=5.4e-13  Score=95.06  Aligned_cols=112  Identities=19%  Similarity=0.285  Sum_probs=84.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|+||++++++|+++|+   +|++++|+.        +..                ...++.++.+|++
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~---~v~~~~~~~--------~~~----------------~~~~~~~~~~D~~   58 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGA---KVIGFDQAF--------LTQ----------------EDYPFATFVLDVS   58 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecch--------hhh----------------cCCceEEEEecCC
Confidence            6789999999999999999999999986   677777753        000                1246788999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+.+       .++|++||++|....       .+.+...+++|+.++..+++++.+.   .+.+++|+
T Consensus        59 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~  132 (252)
T PRK08220         59 DAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVT  132 (252)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            865      444443       358999999997542       3567778999999999999988642   23457877


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       133 ~s  134 (252)
T PRK08220        133 VG  134 (252)
T ss_pred             EC
Confidence            65

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.50  E-value=3.4e-13  Score=96.42  Aligned_cols=115  Identities=20%  Similarity=0.246  Sum_probs=81.6

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |+.+.+ +++++++||||+|+||++++++|+++|+   +|+++.|+..  .+.+....+..             ...++.
T Consensus         1 ~~~~~~-~~~k~ilItGasg~IG~~~a~~l~~~G~---~Vi~~~r~~~--~~~~~~~~l~~-------------~~~~~~   61 (258)
T PRK06949          1 MGRSIN-LEGKVALVTGASSGLGARFAQVLAQAGA---KVVLASRRVE--RLKELRAEIEA-------------EGGAAH   61 (258)
T ss_pred             CCcccC-CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEE
Confidence            444444 6789999999999999999999999986   6788887532  11111111100             124678


Q ss_pred             EEEcccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHH
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIAL  140 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~  140 (152)
                      ++.+|+++++      ++.+.+       .++|++||++|....       ...+..++++|+.++..+.+++.
T Consensus        62 ~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  129 (258)
T PRK06949         62 VVSLDVTDYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVA  129 (258)
T ss_pred             EEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHH
Confidence            8999998854      444443       368999999996431       34577789999999999988875

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.50  E-value=8.1e-13  Score=94.66  Aligned_cols=121  Identities=19%  Similarity=0.213  Sum_probs=81.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ..+++++||||+|+||+++++.|++.|+   .++++.++.. ....+....+..             ...++.++.+|++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~Dl~   69 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGF---DVAVHYNRSR-DEAEALAAEIRA-------------LGRRAVALQADLA   69 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCH-HHHHHHHHHHHh-------------cCCeEEEEEcCCC
Confidence            4578999999999999999999999986   5555555321 111111111110             1246788999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      |.+      ++.+++       .++|++||+||....       .+.++.++++|+.++..+++++.+.   ...+++|+
T Consensus        70 d~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  143 (258)
T PRK09134         70 DEA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVN  143 (258)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence            865      344433       358999999986431       3567778999999999999988653   12245555


Q ss_pred             c
Q psy11862        151 I  151 (152)
Q Consensus       151 ~  151 (152)
                      +
T Consensus       144 ~  144 (258)
T PRK09134        144 M  144 (258)
T ss_pred             E
Confidence            4

>PLN02778 3,5-epimerase/4-reductase

Probab=99.50  E-value=2.2e-13  Score=99.86  Aligned_cols=93  Identities=25%  Similarity=0.234  Sum_probs=67.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .|+++||||+||||++++++|+++|++   |....                                       .|+.+.
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~---V~~~~---------------------------------------~~~~~~   46 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGID---FHYGS---------------------------------------GRLENR   46 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCE---EEEec---------------------------------------CccCCH
Confidence            468999999999999999999999874   33221                                       122221


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                      .      .+...+.  ++|+|||+||..+.      ..+....+++|+.++.+++++|.+. +++++++.
T Consensus        47 ~------~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~~v~~s  109 (298)
T PLN02778         47 A------SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLVLTNYA  109 (298)
T ss_pred             H------HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEe
Confidence            1      2333333  68999999997642      2355678999999999999999987 67655543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.50  E-value=8e-13  Score=94.83  Aligned_cols=124  Identities=18%  Similarity=0.206  Sum_probs=82.9

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||.+++++|+++|+   .+++..|+.. ....+...++..             ...++.++.+|
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~---~vvi~~~~~~-~~~~~~~~~l~~-------------~~~~~~~~~~D   65 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKA---KVVINYRSDE-EEANDVAEEIKK-------------AGGEAIAVKGD   65 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCCH-HHHHHHHHHHHH-------------cCCeEEEEEec
Confidence            347889999999999999999999999986   5566666432 111111111111             12467788999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHH----hcCCCcc
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIAL----KMKKLVV  147 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~  147 (152)
                      +++++      ++.+++       .++|++||++|....       .+.++..+++|+.++..+.+.+.    +.+..++
T Consensus        66 l~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~  139 (261)
T PRK08936         66 VTVES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGN  139 (261)
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence            99865      344333       368999999996432       35567789999999887766653    3212357


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       140 iv~~s  144 (261)
T PRK08936        140 IINMS  144 (261)
T ss_pred             EEEEc
Confidence            77764

>PRK12743 oxidoreductase; Provisional

Probab=99.50  E-value=5.7e-13  Score=95.39  Aligned_cols=126  Identities=17%  Similarity=0.120  Sum_probs=83.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|+++|+   +|+++.++.. ....+....+..             ....+.++.+|++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~---~V~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~Dl~~~   64 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF---DIGITWHSDE-EGAKETAEEVRS-------------HGVRAEIRQLDLSDL   64 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCCh-HHHHHHHHHHHh-------------cCCceEEEEccCCCH
Confidence            57999999999999999999999997   5566554322 111111111111             135788899999986


Q ss_pred             CCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceEecC
Q psy11862         90 NLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM----KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~S  152 (152)
                      +..-. .+++.+.+.++|++||++|....       .+.+...+++|+.++..+++++.+.    ++.+++|++|
T Consensus        65 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~is  139 (256)
T PRK12743         65 PEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINIT  139 (256)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence            51000 11122223468999999996431       4567778999999999999887642    1235788775

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.50  E-value=4.2e-13  Score=94.10  Aligned_cols=115  Identities=17%  Similarity=0.218  Sum_probs=80.3

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+|+++||||+|++|+++++.|+++ +   +|++++|+..      .+..+..             ....+.++.+|+++
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~---~V~~~~r~~~------~~~~~~~-------------~~~~~~~~~~D~~~   58 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-H---TLLLGGRPAE------RLDELAA-------------ELPGATPFPVDLTD   58 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-C---CEEEEeCCHH------HHHHHHH-------------HhccceEEecCCCC
Confidence            3579999999999999999999988 6   5788888532      1111110             01357788999998


Q ss_pred             CCCCCChhHHHHHhc---cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQE---EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~---~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      ++      ++.+++.   ++|++||++|....       .+.+...++.|+.++..+.+.+.+.  ...+++|++|
T Consensus        59 ~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~s  128 (227)
T PRK08219         59 PE------AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFIN  128 (227)
T ss_pred             HH------HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence            54      5666665   69999999997532       3456677899999977666665431  1235777765

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.50  E-value=9.3e-13  Score=93.29  Aligned_cols=127  Identities=13%  Similarity=0.135  Sum_probs=83.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++||||+|++|.++++.|+++|+   .|++++|+..  ...+...++...            ......++.+|++
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~---~V~~~~r~~~--~~~~~~~~l~~~------------~~~~~~~~~~D~~   66 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGA---TVILVARHQK--KLEKVYDAIVEA------------GHPEPFAIRFDLM   66 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCChH--HHHHHHHHHHHc------------CCCCcceEEeeec
Confidence            6678999999999999999999999986   6788888653  222222222110            1134567788987


Q ss_pred             CCCCCCChh----HHHHHh-ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDS----DLLMLQ-EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~----~~~~~~-~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +... -..+    .+.+.+ ..+|++||+||...        ..+++...+++|+.++.++++++.+.   .+..+++++
T Consensus        67 ~~~~-~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~  145 (239)
T PRK08703         67 SAEE-KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFV  145 (239)
T ss_pred             ccch-HHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            6320 0011    122223 46899999999632        13456668999999999998888542   134577765


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       146 s  146 (239)
T PRK08703        146 G  146 (239)
T ss_pred             e
Confidence            4

>PRK09135 pteridine reductase; Provisional

Probab=99.49  E-value=5.9e-13  Score=94.50  Aligned_cols=112  Identities=21%  Similarity=0.232  Sum_probs=79.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|++|++++++|++.|+   +|++++|+..  +..+.+.....           ......+.++.+|++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~---~v~~~~r~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~Dl~   67 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGY---RVAIHYHRSA--AEADALAAELN-----------ALRPGSAAALQADLL   67 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCH--HHHHHHHHHHH-----------hhcCCceEEEEcCCC
Confidence            4568999999999999999999999986   6777787532  11122211100           001245788999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      +++      ++.++++       ++|+|||++|...       ..+.++.++++|+.++.++++++.+
T Consensus        68 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  129 (249)
T PRK09135         68 DPD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAP  129 (249)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHH
Confidence            855      4544443       5799999999642       1345677899999999999999864

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.49  E-value=4.2e-13  Score=96.07  Aligned_cols=121  Identities=14%  Similarity=0.076  Sum_probs=83.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||.++++.|++.|+   .|++++|+..  ...+....+...           ....++.++.+|++++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~---~vi~~~r~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~   65 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY---RVAVADINSE--KAANVAQEINAE-----------YGEGMAYGFGADATSE   65 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHHh-----------cCCceeEEEEccCCCH
Confidence            57899999999999999999999986   6777787543  111111111110           0013588999999985


Q ss_pred             CCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceEec
Q psy11862         90 NLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-LVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~  151 (152)
                      +      ++..+       +.++|++||+||...       ..+.+...+++|+.++..+++++.+.   .+ ..++|++
T Consensus        66 ~------~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~  139 (259)
T PRK12384         66 Q------SVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQI  139 (259)
T ss_pred             H------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence            4      33333       346899999998643       24567778999999999888887642   23 3577776


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       140 s  140 (259)
T PRK12384        140 N  140 (259)
T ss_pred             c
Confidence            4

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.49  E-value=7e-13  Score=94.45  Aligned_cols=119  Identities=17%  Similarity=0.271  Sum_probs=81.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|+++|+   +|++..++..     +....+..         .   ...++.++.+|++
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~---~vv~~~~~~~-----~~~~~~~~---------~---~~~~~~~~~~D~~   62 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGA---RVVVNYHQSE-----DAAEALAD---------E---LGDRAIALQADVT   62 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCC---eEEEEcCCCH-----HHHHHHHH---------H---hCCceEEEEcCCC
Confidence            4568999999999999999999999987   4555444321     11111110         0   0146788899998


Q ss_pred             CCCCCCChhHHHHHhc-------c-ccEEEecccccc-------------chhhHHHHHHhhhHHHHHHHHHHHhc---C
Q psy11862         88 QANLGIKDSDLLMLQE-------E-VSVVFNGAASLK-------------LEAELKENVAANTRGTQRLLDIALKM---K  143 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~-~d~vi~~a~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~---~  143 (152)
                      +++      ++..+++       + +|++||+||...             ..+.+...+++|+.++.++++++.+.   .
T Consensus        63 ~~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  136 (253)
T PRK08642         63 DRE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ  136 (253)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc
Confidence            855      3444332       3 899999998521             13456678999999999999998642   2


Q ss_pred             CCcceEecC
Q psy11862        144 KLVVSLDIG  152 (152)
Q Consensus       144 ~~~~~v~~S  152 (152)
                      +..++|++|
T Consensus       137 ~~g~iv~is  145 (253)
T PRK08642        137 GFGRIINIG  145 (253)
T ss_pred             CCeEEEEEC
Confidence            346788764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=1.2e-12  Score=94.04  Aligned_cols=122  Identities=10%  Similarity=0.035  Sum_probs=84.0

Q ss_pred             cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+  ++||.+++++|++.|+   +|++..|+...   .+.++++...         ..  ..++.++.+|
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~---~v~~~~r~~~~---~~~~~~~~~~---------~~--~~~~~~~~~D   67 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGA---KLVFTYAGERL---EKEVRELADT---------LE--GQESLLLPCD   67 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEecCcccc---hHHHHHHHHH---------cC--CCceEEEecC
Confidence            678999999997  8999999999999986   56777664321   2223222110         00  2467788999


Q ss_pred             cCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862         86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~  146 (152)
                      ++|++      ++.++       +.++|++|||||...           ..+.+...+++|+.++..+.+++.+. ..-.
T Consensus        68 v~d~~------~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g  141 (257)
T PRK08594         68 VTSDE------EITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGG  141 (257)
T ss_pred             CCCHH------HHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCc
Confidence            99865      33333       346899999998642           13456668899999999988887753 1225


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       142 ~Iv~is  147 (257)
T PRK08594        142 SIVTLT  147 (257)
T ss_pred             eEEEEc
Confidence            777765

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.49  E-value=4.4e-13  Score=101.60  Aligned_cols=107  Identities=21%  Similarity=0.276  Sum_probs=81.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|++.  ...+....                ...++..+.+|++
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~---~Vi~l~r~~~--~l~~~~~~----------------~~~~v~~v~~Dvs  234 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGA---KVVALTSNSD--KITLEING----------------EDLPVKTLHWQVG  234 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHhh----------------cCCCeEEEEeeCC
Confidence            5789999999999999999999999986   6777777532  11111100                0134667889998


Q ss_pred             CCCCCCChhHHHHHhccccEEEecccccc----chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLK----LEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      +++      ++.+.++++|++|||||...    ..++++..+++|+.++.++++++.+
T Consensus       235 d~~------~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp  286 (406)
T PRK07424        235 QEA------ALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT  286 (406)
T ss_pred             CHH------HHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            854      67888889999999998653    2446778999999999999999864

>PRK08264 short chain dehydrogenase; Validated

Probab=99.49  E-value=8.5e-13  Score=93.34  Aligned_cols=115  Identities=21%  Similarity=0.302  Sum_probs=85.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|++|+++++.|+++|+  .+|++++|+...      +.+                ...++.++.+|++
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~~~------~~~----------------~~~~~~~~~~D~~   59 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDPES------VTD----------------LGPRVVPLQLDVT   59 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecChhh------hhh----------------cCCceEEEEecCC
Confidence            5678999999999999999999999986  367778876431      110                1256888999999


Q ss_pred             CCCCCCChhHHHHHhc---cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE---EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +++      ++.++++   .+|++||++|...        ..+.+...+++|+.++.++++++.+.   .+.++|+++|
T Consensus        60 ~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~s  132 (238)
T PRK08264         60 DPA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVL  132 (238)
T ss_pred             CHH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence            865      4555544   6899999999722        24566778999999999999987642   2456788765

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.49  E-value=8.6e-13  Score=94.58  Aligned_cols=122  Identities=17%  Similarity=0.198  Sum_probs=85.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|++|.++++.|++.|+   .|++++|+..  ...+...++..            ....++.++.+|++
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~------------~~~~~~~~~~~D~~   67 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGC---HLHLVARDAD--ALEALAADLRA------------AHGVDVAVHALDLS   67 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh------------hcCCceEEEEecCC
Confidence            5689999999999999999999999986   6788887542  11221111111            11246788899998


Q ss_pred             CCCCCCChhHHHHH---hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIKDSDLLML---QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~---~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +++      ++..+   +.++|++||++|...       ..+.+...+++|+.++..+++++.+.   .+.+++|++|
T Consensus        68 ~~~------~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~is  139 (259)
T PRK06125         68 SPE------AREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVI  139 (259)
T ss_pred             CHH------HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            865      34443   357899999998643       14567888999999999998887532   1234677664

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.49  E-value=7.9e-13  Score=94.55  Aligned_cols=117  Identities=21%  Similarity=0.248  Sum_probs=82.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||.++++.|++.|+   .|++++|+..  ...+....+ .              ..++.++.+|+.++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~---~v~~~~r~~~--~~~~~~~~~-~--------------~~~~~~~~~D~~~~   61 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD---RVLALDIDAA--ALAAFADAL-G--------------DARFVPVACDLTDA   61 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh-c--------------CCceEEEEecCCCH
Confidence            57899999999999999999999986   6788887542  111111111 0              14678899999986


Q ss_pred             CCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +      ++...+.       ++|++||++|....       .+.+...+.+|+.++..+++++...   .+.++|+++|
T Consensus        62 ~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s  135 (257)
T PRK07074         62 A------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIG  135 (257)
T ss_pred             H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEc
Confidence            5      4444433       58999999986532       3445667889999999999888531   2346788765

>PRK12742 oxidoreductase; Provisional

Probab=99.49  E-value=7.9e-13  Score=93.39  Aligned_cols=117  Identities=12%  Similarity=0.193  Sum_probs=80.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|+++|+   +|++..|+..     +..+++...              ..+.++.+|++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~---~v~~~~~~~~-----~~~~~l~~~--------------~~~~~~~~D~~   61 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGA---NVRFTYAGSK-----DAAERLAQE--------------TGATAVQTDSA   61 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCCH-----HHHHHHHHH--------------hCCeEEecCCC
Confidence            5689999999999999999999999986   5555554321     122221110              12456788998


Q ss_pred             CCCCCCChhHHHHHh---ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ---EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~---~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      +.+      ++.+.+   .++|++||++|....       .++++..+++|+.++..+++.+.+. ...+++|++|
T Consensus        62 ~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  131 (237)
T PRK12742         62 DRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIG  131 (237)
T ss_pred             CHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence            754      344433   468999999986431       4567889999999999997776653 2235777764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=5.7e-13  Score=96.37  Aligned_cols=120  Identities=9%  Similarity=0.090  Sum_probs=83.0

Q ss_pred             cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      |++++++||||++  +||++++++|++.|+   +|++..|+..   ..+.++++...             .....++.+|
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga---~V~~~~r~~~---~~~~~~~~~~~-------------~g~~~~~~~D   65 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGA---ELAFTYQGEA---LGKRVKPLAES-------------LGSDFVLPCD   65 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCC---EEEEecCchH---HHHHHHHHHHh-------------cCCceEEeCC
Confidence            6789999999997  999999999999996   5666666421   12223322110             0122468899


Q ss_pred             cCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862         86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~  146 (152)
                      +++++      ++.++       +.++|++|||||...           ..++|+..+++|+.+++++++++.+. ..-.
T Consensus        66 v~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G  139 (271)
T PRK06505         66 VEDIA------SVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGG  139 (271)
T ss_pred             CCCHH------HHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCc
Confidence            99865      34333       347899999999642           14567788999999999998887652 1224


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       140 ~Iv~is  145 (271)
T PRK06505        140 SMLTLT  145 (271)
T ss_pred             eEEEEc
Confidence            677764

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.48  E-value=9.7e-13  Score=93.68  Aligned_cols=128  Identities=10%  Similarity=0.052  Sum_probs=82.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   .+++..|+.. ....+.+..+..             ...++.++.+|++
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~   66 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGS---LVVVNAKKRA-EEMNETLKMVKE-------------NGGEGIGVLADVS   66 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCCh-HHHHHHHHHHHH-------------cCCeeEEEEeccC
Confidence            4578999999999999999999999987   4555554321 111111111111             1245678889998


Q ss_pred             CCCCCC-ChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         88 QANLGI-KDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~-~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      ++..-. ..+++...+.++|++||+||....       ...++..+++|+.+...+++++.+. ...++||++|
T Consensus        67 ~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s  140 (252)
T PRK06077         67 TREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIA  140 (252)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEc
Confidence            865100 011222223468999999996321       3345678899999999999988753 1224777765

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.48  E-value=7.4e-13  Score=94.75  Aligned_cols=126  Identities=20%  Similarity=0.167  Sum_probs=84.7

Q ss_pred             cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCC------HHHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862          8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLT------PKARLAEFSKLPVFERLRKECPAQLSRL   79 (152)
Q Consensus         8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (152)
                      +++++++||||+|  +||.+++++|++.|+   .|++++|++.+..      ..+... +.     ..+    .....++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~---~vi~~~r~~~~~~~~~~~~~~~~~~-~~-----~~~----~~~~~~~   69 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGI---DIFFTYWSPYDKTMPWGMHDKEPVL-LK-----EEI----ESYGVRC   69 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCC---cEEEEcCCccccccccccchhhHHH-HH-----HHH----HhcCCeE
Confidence            4678999999995  899999999999986   6778887632110      011100 00     011    1113468


Q ss_pred             EEEEcccCCCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---
Q psy11862         80 HIIEGDILQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---  142 (152)
Q Consensus        80 ~~~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---  142 (152)
                      .++.+|+++++      ++..+       +.++|++||+||....       .+.++..+++|+.++..+++++.+.   
T Consensus        70 ~~~~~D~~~~~------~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  143 (256)
T PRK12748         70 EHMEIDLSQPY------APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDG  143 (256)
T ss_pred             EEEECCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhh
Confidence            89999999855      33333       3468999999986431       3456778999999999999988642   


Q ss_pred             CCCcceEecC
Q psy11862        143 KKLVVSLDIG  152 (152)
Q Consensus       143 ~~~~~~v~~S  152 (152)
                      ...+++|++|
T Consensus       144 ~~~~~iv~~s  153 (256)
T PRK12748        144 KAGGRIINLT  153 (256)
T ss_pred             cCCeEEEEEC
Confidence            1235788775

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.48  E-value=7.1e-13  Score=96.02  Aligned_cols=106  Identities=17%  Similarity=0.139  Sum_probs=77.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++|||+ |+||++++++|. .|+   +|++++|+..  ...+...++..             ...++.++.+|++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~---~Vv~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dv~d~   61 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGK---KVLLADYNEE--NLEAAAKTLRE-------------AGFDVSTQEVDVSSR   61 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEeecCCH
Confidence            468999997 799999999996 675   7788888532  12222222111             124678899999986


Q ss_pred             CCCCChhHHHHHh------ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         90 NLGIKDSDLLMLQ------EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        90 ~~~~~~~~~~~~~------~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      +      ++.+++      .++|++|||||......++..++++|+.++.++++++.+
T Consensus        62 ~------~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~  113 (275)
T PRK06940         62 E------SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGK  113 (275)
T ss_pred             H------HHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHH
Confidence            5      344333      468999999998765677888999999999999998865

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.48  E-value=6e-13  Score=90.67  Aligned_cols=97  Identities=23%  Similarity=0.386  Sum_probs=80.2

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      |+|+||+|++|++++++|+++|+   +|++++|++.  ...+                     ..+++++.+|+.|+   
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~---~V~~~~R~~~--~~~~---------------------~~~~~~~~~d~~d~---   51 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH---EVTALVRSPS--KAED---------------------SPGVEIIQGDLFDP---   51 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS---EEEEEESSGG--GHHH---------------------CTTEEEEESCTTCH---
T ss_pred             eEEECCCChHHHHHHHHHHHCCC---EEEEEecCch--hccc---------------------ccccccceeeehhh---
Confidence            78999999999999999999985   8899999754  1111                     26899999999885   


Q ss_pred             CChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         93 IKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        93 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                         +++.+.++++|+||++++....          +...+.++++++++. +++++|++|
T Consensus        52 ---~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s   97 (183)
T PF13460_consen   52 ---DSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLS   97 (183)
T ss_dssp             ---HHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEE
T ss_pred             ---hhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeee
Confidence               4799999999999999975432          177788999999997 788999876

...

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.48  E-value=1.7e-13  Score=100.18  Aligned_cols=94  Identities=19%  Similarity=0.185  Sum_probs=72.7

Q ss_pred             EEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCC
Q psy11862         14 LVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGI   93 (152)
Q Consensus        14 lItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   93 (152)
                      +||||+||||+++++.|++.|+.   ++++.+.                                   ..+|++++.   
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~---v~~~~~~-----------------------------------~~~Dl~~~~---   39 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFT---NLVLRTH-----------------------------------KELDLTRQA---   39 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCc---EEEeecc-----------------------------------ccCCCCCHH---
Confidence            69999999999999999999874   3333221                                   136887754   


Q ss_pred             ChhHHHHHhc--cccEEEeccccccc----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         94 KDSDLLMLQE--EVSVVFNGAASLKL----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        94 ~~~~~~~~~~--~~d~vi~~a~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                         ++..+++  ++|+|||+|+..+.    ..+....++.|+.++.++++++.+. ++++||++|
T Consensus        40 ---~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~S  100 (306)
T PLN02725         40 ---DVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLG  100 (306)
T ss_pred             ---HHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeC
Confidence               5766665  57999999987542    2345568899999999999999997 688999986

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.48  E-value=7.3e-13  Score=95.84  Aligned_cols=122  Identities=10%  Similarity=0.051  Sum_probs=84.9

Q ss_pred             cccCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          6 RWYAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         6 ~~~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      ..|++++++||||+  ++||.++++.|+++|+   +|++..|+.   ...++++.+...             ......+.
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~---~V~l~~r~~---~~~~~~~~l~~~-------------~~~~~~~~   66 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGA---ELAFTYQGD---ALKKRVEPLAAE-------------LGAFVAGH   66 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCch---HHHHHHHHHHHh-------------cCCceEEe
Confidence            45778999999997  8999999999999996   566666632   123333333211             12245688


Q ss_pred             cccCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CC
Q psy11862         84 GDILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KK  144 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~  144 (152)
                      +|+++++      +++++       +.++|++|||||...           ..+.+...+++|+.++..+++++.+. .+
T Consensus        67 ~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~  140 (272)
T PRK08159         67 CDVTDEA------SIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD  140 (272)
T ss_pred             cCCCCHH------HHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            9999865      34433       346899999999652           13567889999999999999988753 22


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      -.++|++|
T Consensus       141 ~g~Iv~is  148 (272)
T PRK08159        141 GGSILTLT  148 (272)
T ss_pred             CceEEEEe
Confidence            25676654

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.48  E-value=4.5e-13  Score=95.12  Aligned_cols=114  Identities=23%  Similarity=0.205  Sum_probs=81.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||.+++++|+++|+   +|++++|+....     +..               ....++.++.+|+++.
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~---~v~~~~r~~~~~-----~~~---------------~~~~~~~~~~~D~~~~   57 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGI---AVLGVARSRHPS-----LAA---------------AAGERLAEVELDLSDA   57 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCC---EEEEEecCcchh-----hhh---------------ccCCeEEEEEeccCCH
Confidence            46899999999999999999999986   677788864311     100               0124688899999986


Q ss_pred             CCCCChhHHHHHh-----------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862         90 NLGIKDSDLLMLQ-----------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM---KKLVV  147 (152)
Q Consensus        90 ~~~~~~~~~~~~~-----------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~  147 (152)
                      +      ++.+.+           .++|++|||+|....        .+.++..+++|+.++..+.+.+.+.   .+.++
T Consensus        58 ~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  131 (243)
T PRK07023         58 A------AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERR  131 (243)
T ss_pred             H------HHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCE
Confidence            5      343321           157999999987532        3556778999999988887776542   23468


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       132 iv~is  136 (243)
T PRK07023        132 ILHIS  136 (243)
T ss_pred             EEEEe
Confidence            88875

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.48  E-value=5.1e-13  Score=98.03  Aligned_cols=108  Identities=20%  Similarity=0.301  Sum_probs=76.6

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      |+||||+|++|+++++.|.+.|+  ..|++++|.....    .+..+                 . ...+..|+.+++  
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~--~~v~~~~~~~~~~----~~~~~-----------------~-~~~~~~d~~~~~--   54 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGI--TDILVVDNLRDGH----KFLNL-----------------A-DLVIADYIDKED--   54 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCC--ceEEEEecCCCch----hhhhh-----------------h-heeeeccCcchh--
Confidence            68999999999999999999986  2566666643311    11110                 0 123456776654  


Q ss_pred             CChhHHHHHh----ccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         93 IKDSDLLMLQ----EEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        93 ~~~~~~~~~~----~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                          .+..+.    .++|+|||+|+.... ..+....+++|+.++.++++++.+. +. +||++|
T Consensus        55 ----~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~S  113 (314)
T TIGR02197        55 ----FLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYAS  113 (314)
T ss_pred             ----HHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEc
Confidence                244443    479999999997543 3456678899999999999999886 45 798886

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.48  E-value=8.7e-13  Score=94.35  Aligned_cols=117  Identities=18%  Similarity=0.125  Sum_probs=81.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||.+++++|+++|+   .|++++|+..  ...+...+                  -...++.+|+
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~---~v~~~~r~~~--~~~~~~~~------------------~~~~~~~~D~   60 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGA---TVVVGDIDPE--AGKAAADE------------------VGGLFVPTDV   60 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHH------------------cCCcEEEeeC
Confidence            47889999999999999999999999986   6777777532  11111111                  0124678999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHh---cCCCcc
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALK---MKKLVV  147 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~  147 (152)
                      ++++      ++.+++       .++|++||++|....         .+.+...+++|+.++..+++.+.+   ..+..+
T Consensus        61 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~  134 (255)
T PRK06057         61 TDED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGS  134 (255)
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcE
Confidence            8854      444444       367999999986431         244677899999999988887753   113456


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       135 iv~~s  139 (255)
T PRK06057        135 IINTA  139 (255)
T ss_pred             EEEEc
Confidence            77654

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.48  E-value=7.9e-13  Score=97.25  Aligned_cols=115  Identities=23%  Similarity=0.308  Sum_probs=82.4

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +++||||+|++|.++++.|++.|+   +|++++|.....  .+.+.....              ..++.++.+|+.+++ 
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~---~V~~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~D~~~~~-   60 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGH---EVVVLDNLSNGS--PEALKRGER--------------ITRVTFVEGDLRDRE-   60 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCC---eEEEEeCCCccc--hhhhhhhcc--------------ccceEEEECCCCCHH-
Confidence            589999999999999999999987   455555432211  111111100              125778889998855 


Q ss_pred             CCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         92 GIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        92 ~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                           ++.++++  ++|+|||+||....   .....+.++.|+.++.++++++.+. +++++|++|
T Consensus        61 -----~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~s  120 (328)
T TIGR01179        61 -----LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSS  120 (328)
T ss_pred             -----HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEec
Confidence                 5777665  68999999997532   2344557889999999999999887 577888876

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.48  E-value=1.1e-12  Score=93.88  Aligned_cols=122  Identities=21%  Similarity=0.272  Sum_probs=85.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|+||++++++|++.|+  ..|++++|+..  +..+....+..             ....+.++.+|++
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~D~~   66 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAE--KGEAQAAELEA-------------LGAKAVFVQADLS   66 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHH--HHHHHHHHHHh-------------cCCeEEEEEccCC
Confidence            6789999999999999999999999986  23788887532  22222222211             1246778899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v  149 (152)
                      +++      ++.+++       .++|++||++|...       ..+.+...+++|+.++.++++++.+.    ...+++|
T Consensus        67 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv  140 (260)
T PRK06198         67 DVE------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIV  140 (260)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            854      344433       36899999999643       24556778999999999998887542    1134677


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       141 ~~s  143 (260)
T PRK06198        141 NIG  143 (260)
T ss_pred             EEC
Confidence            765

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.48  E-value=9.5e-13  Score=94.41  Aligned_cols=119  Identities=13%  Similarity=0.108  Sum_probs=82.1

Q ss_pred             cCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++|||+  +++||.+++++|++.|+   +|++.+|+... +..+.+...            .   ...+.++.+|
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~---~v~l~~r~~~~-~~~~~~~~~------------~---~~~~~~~~~D   65 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGA---EVVLTGFGRAL-RLTERIAKR------------L---PEPAPVLELD   65 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCC---EEEEecCccch-hHHHHHHHh------------c---CCCCcEEeCC
Confidence            67899999999  89999999999999986   67777775321 111222110            0   1246688999


Q ss_pred             cCCCCCCCChhHHHHH-------hccccEEEecccccc-------c----hhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862         86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------L----EAELKENVAANTRGTQRLLDIALKM-KKLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~  146 (152)
                      +++++      ++.++       +.++|++|||||...       +    .+.+...+++|+.+++.+.+++.+. ..-.
T Consensus        66 v~~~~------~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g  139 (256)
T PRK07889         66 VTNEE------HLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGG  139 (256)
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCc
Confidence            99865      33333       346899999999752       1    2455667999999999998888653 1224


Q ss_pred             ceEec
Q psy11862        147 VSLDI  151 (152)
Q Consensus       147 ~~v~~  151 (152)
                      ++|++
T Consensus       140 ~Iv~i  144 (256)
T PRK07889        140 SIVGL  144 (256)
T ss_pred             eEEEE
Confidence            66654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.47  E-value=1.5e-12  Score=92.02  Aligned_cols=114  Identities=15%  Similarity=0.164  Sum_probs=81.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|+++|+   +|++++|++.  +..+.+..                  ..+.++.+|++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~------------------~~~~~~~~D~~~~   58 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ---PVIVSYRTHY--PAIDGLRQ------------------AGAQCIQADFSTN   58 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCch--hHHHHHHH------------------cCCEEEEcCCCCH
Confidence            47899999999999999999999986   6777887643  11222111                  1356789999886


Q ss_pred             CCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC--CcceEe
Q psy11862         90 NLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK--LVVSLD  150 (152)
Q Consensus        90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~~v~  150 (152)
                      +      ++...       +.++|++||+||...       ..+.++.++++|+.+++.+.+++.+.   .+  ..++|+
T Consensus        59 ~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~  132 (236)
T PRK06483         59 A------GIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIH  132 (236)
T ss_pred             H------HHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEE
Confidence            5      33332       346899999998642       14567889999999999888877652   12  346777


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       133 ~s  134 (236)
T PRK06483        133 IT  134 (236)
T ss_pred             Ec
Confidence            64

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.47  E-value=1.3e-12  Score=92.61  Aligned_cols=119  Identities=15%  Similarity=0.165  Sum_probs=83.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++|||++|++|+++++.|++.|+   +|++++|+.. ....+.....             .....++.++.+|+++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~---~vi~~~r~~~-~~~~~~~~~~-------------~~~~~~~~~~~~D~~~~~   65 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY---RVIATYFSGN-DCAKDWFEEY-------------GFTEDQVRLKELDVTDTE   65 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCcH-HHHHHHHHHh-------------hccCCeEEEEEcCCCCHH
Confidence            5899999999999999999999986   7788887643 1111111111             011246889999999855


Q ss_pred             CCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S  152 (152)
                            ++.+++       .++|++||++|...       ..+.++..+++|+.++.++.+++.+   ..+.++||++|
T Consensus        66 ------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is  138 (245)
T PRK12824         66 ------ECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINIS  138 (245)
T ss_pred             ------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEC
Confidence                  344433       36899999998643       2456777899999999998776532   12456888875

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.47  E-value=8.1e-13  Score=95.03  Aligned_cols=121  Identities=8%  Similarity=0.107  Sum_probs=81.3

Q ss_pred             ccCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++++++||||  +++||++++++|+++|+   +|++..|..   ...+.++++...             ......+.+
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~---~v~~~~~~~---~~~~~~~~~~~~-------------~~~~~~~~~   63 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGA---ELAFTYVVD---KLEERVRKMAAE-------------LDSELVFRC   63 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCcH---HHHHHHHHHHhc-------------cCCceEEEC
Confidence            367899999997  67999999999999986   556655531   223333333211             122456889


Q ss_pred             ccCCCCCCCChhHHHHHh-------ccccEEEeccccccc------------hhhHHHHHHhhhHHHHHHHHHHHhc--C
Q psy11862         85 DILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------------EAELKENVAANTRGTQRLLDIALKM--K  143 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~--~  143 (152)
                      |+++++      ++.+++       .++|++|||||....            .+.++..+++|+.++..+.+++.+.  .
T Consensus        64 Dv~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~  137 (261)
T PRK08690         64 DVASDD------EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG  137 (261)
T ss_pred             CCCCHH------HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh
Confidence            999865      444333       468999999997531            2346667889999999888876542  1


Q ss_pred             CCcceEecC
Q psy11862        144 KLVVSLDIG  152 (152)
Q Consensus       144 ~~~~~v~~S  152 (152)
                      ...++|++|
T Consensus       138 ~~g~Iv~is  146 (261)
T PRK08690        138 RNSAIVALS  146 (261)
T ss_pred             cCcEEEEEc
Confidence            224677764

>TIGR02415 23BDH acetoin reductases

Probab=99.47  E-value=1.1e-12  Score=93.59  Aligned_cols=118  Identities=20%  Similarity=0.192  Sum_probs=82.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++|||++|+||.+++++|++.|+   +|+++.|+..  ...+..+.+..             ....+.++.+|+++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~   62 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF---AVAVADLNEE--TAKETAKEINQ-------------AGGKAVAYKLDVSDKD   62 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEcCCCCHH
Confidence            5799999999999999999999985   6777777532  22222222211             1246788999999865


Q ss_pred             CCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~S  152 (152)
                            ++.+++       .++|++||++|...       ..+.++..+++|+.++..+++++..    .+..+++|++|
T Consensus        63 ------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s  136 (254)
T TIGR02415        63 ------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA  136 (254)
T ss_pred             ------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence                  344433       36799999998642       1456677899999999988777653    21235777764

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.47  E-value=2.6e-13  Score=99.57  Aligned_cols=107  Identities=21%  Similarity=0.308  Sum_probs=69.6

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      |+||||+|+||++++++|++.|+   .++++.|+.....   ....                      ...+|+.|..  
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~---~~v~~~~~~~~~~---~~~~----------------------~~~~~~~d~~--   51 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGI---TDILVVDNLKDGT---KFVN----------------------LVDLDIADYM--   51 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCC---ceEEEecCCCcch---HHHh----------------------hhhhhhhhhh--
Confidence            79999999999999999999986   3344444332110   0000                      1123444321  


Q ss_pred             CChhH-HHHHh-----ccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         93 IKDSD-LLMLQ-----EEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        93 ~~~~~-~~~~~-----~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                       ..++ +...+     .++|+|||+||.... ..+....++.|+.++.+++++|.+. ++ +||++|
T Consensus        52 -~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~S  115 (308)
T PRK11150         52 -DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYAS  115 (308)
T ss_pred             -hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEc
Confidence             0112 23333     268999999986442 2234457899999999999999987 55 688886

>PRK05855 short chain dehydrogenase; Validated

Probab=99.46  E-value=9.3e-13  Score=103.83  Aligned_cols=122  Identities=13%  Similarity=0.077  Sum_probs=87.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+.+++++||||+|+||++++++|++.|+   +|++++|+..  ...+....+..             ...++.++.+|+
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dv  373 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGA---EVVASDIDEA--AAERTAELIRA-------------AGAVAHAYRVDV  373 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEcCC
Confidence            35678999999999999999999999987   5788888542  11111111111             124688899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-Ccce
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~  148 (152)
                      ++++      ++.+++       .++|++|||||....       .+.+..++++|+.++.++++++...   .+ .+++
T Consensus       374 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~i  447 (582)
T PRK05855        374 SDAD------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHI  447 (582)
T ss_pred             CCHH------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence            9965      344333       358999999997542       4567778999999999998887542   12 2578


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       448 v~~s  451 (582)
T PRK05855        448 VNVA  451 (582)
T ss_pred             EEEC
Confidence            8876

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.46  E-value=1.7e-12  Score=87.09  Aligned_cols=120  Identities=18%  Similarity=0.207  Sum_probs=83.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHH-HHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPK-ARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ++++||||+|++|.+++++|+++|.  ..|++..|+....... ..+..+..             ...++.++.+|++++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~   65 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGPDAPGAAELLAELEA-------------LGAEVTVVACDVADR   65 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhC--CeEEEEeCCCCCCccHHHHHHHHHh-------------cCCeEEEEECCCCCH
Confidence            4789999999999999999999875  3567777765432111 11122111             125677889999885


Q ss_pred             CCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .      ++.+++       .++|++||++|....       .+.++.++++|+.++.++++++... +.++++++|
T Consensus        66 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~s  135 (180)
T smart00822       66 A------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFS  135 (180)
T ss_pred             H------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEc
Confidence            4      344333       357999999986432       3556778999999999999999765 566777764

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK12320 hypothetical protein; Provisional

Probab=99.46  E-value=5.4e-13  Score=106.56  Aligned_cols=101  Identities=18%  Similarity=0.166  Sum_probs=78.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+||||+||||+++++.|++.|+   .|++++|.....                        ....+.++.+|+.++.
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~---~Vi~ldr~~~~~------------------------~~~~ve~v~~Dl~d~~   53 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGH---TVSGIAQHPHDA------------------------LDPRVDYVCASLRNPV   53 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCChhhc------------------------ccCCceEEEccCCCHH
Confidence            4799999999999999999999987   677888743210                        0146788999998753


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                             +.+.+.++|+|||+|+... ..    ...+|+.++.+++++|++. ++ ++|++|
T Consensus        54 -------l~~al~~~D~VIHLAa~~~-~~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~S  101 (699)
T PRK12320         54 -------LQELAGEADAVIHLAPVDT-SA----PGGVGITGLAHVANAAARA-GA-RLLFVS  101 (699)
T ss_pred             -------HHHHhcCCCEEEEcCccCc-cc----hhhHHHHHHHHHHHHHHHc-CC-eEEEEE
Confidence                   6677778999999998642 11    2257999999999999987 55 688876

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.46  E-value=1.3e-12  Score=96.40  Aligned_cols=119  Identities=16%  Similarity=0.161  Sum_probs=83.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +++++||||+++||.+++++|+++| +   +|++.+|+..  ...+...++.             .....+.++.+|+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~---~V~l~~r~~~--~~~~~~~~l~-------------~~~~~~~~~~~Dl~~   64 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW---HVIMACRDFL--KAEQAAKSLG-------------MPKDSYTIMHLDLGS   64 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC---EEEEEeCCHH--HHHHHHHHhc-------------CCCCeEEEEEcCCCC
Confidence            6799999999999999999999998 6   6777777532  1111111110             112467788999998


Q ss_pred             CCCCCChhHHHHH-------hccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---C--CCcce
Q psy11862         89 ANLGIKDSDLLML-------QEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---K--KLVVS  148 (152)
Q Consensus        89 ~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~--~~~~~  148 (152)
                      .+      ++.++       ..++|++|||||...        ..+.+...+++|+.++..+++++.+.   .  +.+++
T Consensus        65 ~~------~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~I  138 (314)
T TIGR01289        65 LD------SVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRL  138 (314)
T ss_pred             HH------HHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeE
Confidence            65      33332       346899999999642        13567778999999999998887542   1  13588


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       139 V~vs  142 (314)
T TIGR01289       139 IIVG  142 (314)
T ss_pred             EEEe
Confidence            8875

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.46  E-value=1.9e-12  Score=93.24  Aligned_cols=120  Identities=13%  Similarity=0.131  Sum_probs=82.3

Q ss_pred             cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||++  +||+++++.|++.|+   .|++..|+.   ...+.++++...             ......+.+|
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~---~vil~~r~~---~~~~~~~~~~~~-------------~~~~~~~~~D   64 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQND---KLKGRVEEFAAQ-------------LGSDIVLPCD   64 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCC---EEEEEecch---hHHHHHHHHHhc-------------cCCceEeecC
Confidence            6789999999985  999999999999997   566666642   223333333211             1345678899


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEeccccccc------------hhhHHHHHHhhhHHHHHHHHHHHhc-CCC
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------------EAELKENVAANTRGTQRLLDIALKM-KKL  145 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~  145 (152)
                      +++++      ++.+++       .++|++|||||....            .+.|+..+++|+.++..+.+++... ..-
T Consensus        65 l~~~~------~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  138 (262)
T PRK07984         65 VAEDA------SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG  138 (262)
T ss_pred             CCCHH------HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC
Confidence            99865      444433       368999999986421            3456678899999999988887643 112


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      .++|++|
T Consensus       139 g~Iv~is  145 (262)
T PRK07984        139 SALLTLS  145 (262)
T ss_pred             cEEEEEe
Confidence            4676654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.46  E-value=1.3e-12  Score=102.20  Aligned_cols=119  Identities=15%  Similarity=0.196  Sum_probs=86.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ...+++++||||+|+||.+++++|+++|+   +|++.+|+..      .++.+...            ...++..+.+|+
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~  324 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGD---RLLIIDRDAE------GAKKLAEA------------LGDEHLSVQADI  324 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHHH------------hCCceeEEEccC
Confidence            34689999999999999999999999986   6788887532      22221110            024566789999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEe
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLD  150 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~  150 (152)
                      ++++      ++.+++       .++|++|||||...        ..+.++.++++|+.+++++.+++.+. .+.+++|+
T Consensus       325 ~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~  398 (520)
T PRK06484        325 TDEA------AVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVN  398 (520)
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEE
Confidence            9865      343333       46899999999752        14567789999999999999998763 23357887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       399 is  400 (520)
T PRK06484        399 LG  400 (520)
T ss_pred             EC
Confidence            75

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1.2e-12  Score=105.00  Aligned_cols=122  Identities=18%  Similarity=0.216  Sum_probs=87.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||.+++++|++.|+   +|++++|+..  ...+...++..             ...++.++.+|+
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dv  429 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGA---TVFLVARNGE--ALDELVAEIRA-------------KGGTAHAYTCDL  429 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEecC
Confidence            46789999999999999999999999986   6788888542  22222222211             124688899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKM---KKLVV  147 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~  147 (152)
                      ++++      ++.+++       .++|++|||||....         .+++...+++|+.++.++++++.+.   .+.++
T Consensus       430 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~  503 (657)
T PRK07201        430 TDSA------AVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGH  503 (657)
T ss_pred             CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCE
Confidence            9865      444443       368999999996421         2456778999999999998887542   24568


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       504 iv~is  508 (657)
T PRK07201        504 VVNVS  508 (657)
T ss_pred             EEEEC
Confidence            88875

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.46  E-value=1.4e-12  Score=93.51  Aligned_cols=117  Identities=19%  Similarity=0.230  Sum_probs=78.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|++.|+   +|++.+|++.  .+.+...++..              ..++.++.+|+++++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~--------------~~~~~~~~~Dv~d~~   61 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGA---RVVISSRNEE--NLEKALKELKE--------------YGEVYAVKADLSDKD   61 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHh--------------cCCceEEEcCCCCHH
Confidence            4799999999999999999999986   6778887542  12222222211              135778899999865


Q ss_pred             CCCChhHHHHHh-------ccccEEEecccccc-----c----hhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEe
Q psy11862         91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK-----L----EAELKENVAANTRGTQRLLDIALK----MKKLVVSLD  150 (152)
Q Consensus        91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~-----~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~  150 (152)
                            ++.+++       .++|++||+||...     .    .+++.+.+.+|+.++..+.+++..    ..+.+++|+
T Consensus        62 ------~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~  135 (259)
T PRK08340         62 ------DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVY  135 (259)
T ss_pred             ------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEE
Confidence                  344333       47899999999642     1    234555678888887766655432    123467888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       136 is  137 (259)
T PRK08340        136 LS  137 (259)
T ss_pred             Ee
Confidence            75

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.45  E-value=2.3e-12  Score=91.17  Aligned_cols=119  Identities=19%  Similarity=0.240  Sum_probs=80.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|++|.++++.|++.|+   +++++.|+.. ....+...+..             ....++.++.+|+++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~-~~~~~~~~~~~-------------~~~~~~~~~~~D~~~~~   63 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY---RVAANCGPNE-ERAEAWLQEQG-------------ALGFDFRVVEGDVSSFE   63 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCH-HHHHHHHHHHH-------------hhCCceEEEEecCCCHH
Confidence            5799999999999999999999986   5666776321 11111111110             01246888999999854


Q ss_pred             CCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         91 LGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                            ++.++       ..++|+|||++|...       ..+++...++.|+.++..+++.+...   .+.+++|++|
T Consensus        64 ------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  136 (242)
T TIGR01829        64 ------SCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINIS  136 (242)
T ss_pred             ------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence                  34333       346899999998643       14566778899999998877665431   2456888876

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.5e-12  Score=92.61  Aligned_cols=109  Identities=19%  Similarity=0.183  Sum_probs=74.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||.+++++|+++|+   .+++..++.. ....+....+..             ...++.++.+|++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~---~vv~~~~~~~-~~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~   64 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGY---AVCLNYLRNR-DAAEAVVQAIRR-------------QGGEALAVAADVADE   64 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC---eEEEecCCCH-HHHHHHHHHHHh-------------CCCcEEEEEeccCCH
Confidence            46899999999999999999999986   4444443221 111111111111             124577889999986


Q ss_pred             CCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      +      ++.+++       .++|++||++|....        .+++...+++|+.++.++++++.+
T Consensus        65 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (248)
T PRK06123         65 A------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK  125 (248)
T ss_pred             H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4      344443       368999999997531        345667899999999999888765

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.45  E-value=1.3e-12  Score=100.58  Aligned_cols=119  Identities=20%  Similarity=0.159  Sum_probs=84.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++|||++|+||.++++.|.++|+   +|++++|+..    .+.+.++...              .+..++.+|+
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga---~vi~~~~~~~----~~~l~~~~~~--------------~~~~~~~~Dv  265 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGA---HVVCLDVPAA----GEALAAVANR--------------VGGTALALDI  265 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCcc----HHHHHHHHHH--------------cCCeEEEEeC
Confidence            45789999999999999999999999986   6777777432    2222222110              1234678899


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++||++|...       ..+.++..+++|+.+++++.+++...   ....+||
T Consensus       266 ~~~~------~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv  339 (450)
T PRK08261        266 TAPD------APARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIV  339 (450)
T ss_pred             CCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEE
Confidence            8864      333333       36899999999653       24667788999999999999998763   1225788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       340 ~~S  342 (450)
T PRK08261        340 GVS  342 (450)
T ss_pred             EEC
Confidence            765

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.9e-12  Score=91.05  Aligned_cols=112  Identities=16%  Similarity=0.117  Sum_probs=79.6

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +++||||+|+||+++++.|++.|+   +|++.+|+..      ++..+...              ..+.++.+|+++++ 
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~---~v~~~~r~~~------~~~~~~~~--------------~~~~~~~~D~~~~~-   57 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH---KVTLVGARRD------DLEVAAKE--------------LDVDAIVCDNTDPA-   57 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHHh--------------ccCcEEecCCCCHH-
Confidence            699999999999999999999986   6677777532      22221110              13457789998865 


Q ss_pred             CCChhHHHHHhc----cccEEEecccccc------------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         92 GIKDSDLLMLQE----EVSVVFNGAASLK------------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        92 ~~~~~~~~~~~~----~~d~vi~~a~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                           ++.++++    ++|++||++|...            ..+.+..++++|+.+++.+++++.+. ....++|++|
T Consensus        58 -----~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~is  130 (223)
T PRK05884         58 -----SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVV  130 (223)
T ss_pred             -----HHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEe
Confidence                 4555443    5899999987411            13567789999999999999998753 1235777764

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.45  E-value=1.1e-12  Score=89.30  Aligned_cols=120  Identities=22%  Similarity=0.286  Sum_probs=84.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.|-+|+||||+.|||.++++++.+.|-   +|++++|+      .+++++....             .+.+..+.+|+.
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN---~VIi~gR~------e~~L~e~~~~-------------~p~~~t~v~Dv~   60 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGN---TVIICGRN------EERLAEAKAE-------------NPEIHTEVCDVA   60 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCC---EEEEecCc------HHHHHHHHhc-------------Ccchheeeeccc
Confidence            5678999999999999999999999984   77888876      3445444321             367888899999


Q ss_pred             CCCCCCChhHH----HHHhccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDL----LMLQEEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~----~~~~~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      |...   ..++    .+.....+++|||||+...         .++..+-+++|+.++..|..+..++   +....+|.+
T Consensus        61 d~~~---~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInV  137 (245)
T COG3967          61 DRDS---RRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINV  137 (245)
T ss_pred             chhh---HHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEe
Confidence            8652   1122    2223367999999997641         2334456889999999988887653   223456666


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       138 S  138 (245)
T COG3967         138 S  138 (245)
T ss_pred             c
Confidence            5

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.3e-12  Score=93.03  Aligned_cols=117  Identities=22%  Similarity=0.237  Sum_probs=80.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|+++|+   +|++++|++.     +.+..+..            ....++.++.+|++++
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~---~V~~~~r~~~-----~~~~~~~~------------~~~~~~~~~~~D~~~~   60 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGT---HVISISRTEN-----KELTKLAE------------QYNSNLTFHSLDLQDV   60 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCC---EEEEEeCCch-----HHHHHHHh------------ccCCceEEEEecCCCH
Confidence            36899999999999999999999986   6777887542     12222111            1125688899999986


Q ss_pred             CCCCChhHHHHHhccc-----------cEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCc
Q psy11862         90 NLGIKDSDLLMLQEEV-----------SVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM----KKLV  146 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~-----------d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~  146 (152)
                      +      ++.++++.+           .++||++|...        ..+.+...+++|+.++..+++.+.+.    +..+
T Consensus        61 ~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  134 (251)
T PRK06924         61 H------ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDK  134 (251)
T ss_pred             H------HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCc
Confidence            5      454444321           27899998643        14566778899999988888776542    2235


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      +||++|
T Consensus       135 ~iv~~s  140 (251)
T PRK06924        135 RVINIS  140 (251)
T ss_pred             eEEEec
Confidence            788765

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.44  E-value=3.2e-12  Score=90.28  Aligned_cols=127  Identities=10%  Similarity=0.042  Sum_probs=82.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+++||++++++|++.|+   .|++.+|+..  .+.+..+.+..             ...++..+.+|++
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~---~V~~~~r~~~--~l~~~~~~i~~-------------~~~~~~~~~~D~~   64 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGA---TLILCDQDQS--ALKDTYEQCSA-------------LTDNVYSFQLKDF   64 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHH--HHHHHHHHHHh-------------cCCCeEEEEccCC
Confidence            5789999999999999999999999986   6777787543  22222222211             1245677889998


Q ss_pred             CCCCCCC-hhHHHHHhc-cccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEecC
Q psy11862         88 QANLGIK-DSDLLMLQE-EVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALK----MKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~-~~~~~~~~~-~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~S  152 (152)
                      +++.--. .+++.+.+. ++|++|||+|....        .+.+.+.+++|+.+++.+.+.+.+    .+..+.+|++|
T Consensus        65 ~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~is  143 (227)
T PRK08862         65 SQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVI  143 (227)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEe
Confidence            8651000 111222334 78999999974321        345666788898888887766543    21235777764

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.44  E-value=1.9e-12  Score=92.09  Aligned_cols=109  Identities=17%  Similarity=0.170  Sum_probs=73.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||.++++.|++.|+   .+++..++.. ....+....+..             ...++.++.+|++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~Dl~~~   64 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGW---SVGINYARDA-AAAEETADAVRA-------------AGGRACVVAGDVANE   64 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCCH-HHHHHHHHHHHh-------------cCCcEEEEEeccCCH
Confidence            46899999999999999999999986   4554443321 111111111111             124688999999886


Q ss_pred             CCCCChhHHHHH-------hccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         90 NLGIKDSDLLML-------QEEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      +      ++..+       +.++|++||+||....        .+++...+.+|+.++..+++++.+
T Consensus        65 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (248)
T PRK06947         65 A------DVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAAR  125 (248)
T ss_pred             H------HHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            4      33333       3468999999996421        345566799999999998766543

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.44  E-value=1.8e-12  Score=95.88  Aligned_cols=127  Identities=21%  Similarity=0.172  Sum_probs=83.9

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .++.++||||+|+||.+++++|+++|+   +|++.+|++.  .+.+..+++..         .  ....++..+.+|+++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~---~Vil~~R~~~--~l~~~~~~l~~---------~--~~~~~~~~~~~Dl~~  115 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL---NLVLVARNPD--KLKDVSDSIQS---------K--YSKTQIKTVVVDFSG  115 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC---CEEEEECCHH--HHHHHHHHHHH---------H--CCCcEEEEEEEECCC
Confidence            478999999999999999999999986   5678888643  22221122111         0  012357778899975


Q ss_pred             CCCCCChhHHHHHhcc--ccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEE--VSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~--~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      ... -..+++.+.+.+  +|++|||||...         ..+.++..+++|+.++..+.+++.+.   .+.+++|++|
T Consensus       116 ~~~-~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iS  192 (320)
T PLN02780        116 DID-EGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIG  192 (320)
T ss_pred             CcH-HHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEe
Confidence            210 001233444443  569999999742         13456678999999999999987642   2446788875

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.44  E-value=4.5e-13  Score=97.65  Aligned_cols=95  Identities=26%  Similarity=0.337  Sum_probs=69.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++|||++|++|+++.+.|.+.|+   .++...|.                                    ..|+.+.+
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~---~v~~~~r~------------------------------------~~dl~d~~   41 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGY---EVIATSRS------------------------------------DLDLTDPE   41 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSE---EEEEESTT------------------------------------CS-TTSHH
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCC---EEEEeCch------------------------------------hcCCCCHH
Confidence            6899999999999999999998875   56666542                                    35777743


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++.+.++  ++|+|||+||..+.   +.+.+..+.+|+.++.+|+++|... + .++||+|
T Consensus        42 ------~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~S  100 (286)
T PF04321_consen   42 ------AVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHIS  100 (286)
T ss_dssp             ------HHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEE
T ss_pred             ------HHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEee
Confidence                  5777766  58999999998764   4577789999999999999999987 4 3888876

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.44  E-value=2.8e-12  Score=90.58  Aligned_cols=114  Identities=19%  Similarity=0.172  Sum_probs=79.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|++.|+++ .+....|+....                       ....++.++.+|+++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~~~-----------------------~~~~~~~~~~~Dls~~~   56 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHKPD-----------------------FQHDNVQWHALDVTDEA   56 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCccc-----------------------cccCceEEEEecCCCHH
Confidence            589999999999999999999987654 455555533210                       01256788999999865


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-------------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-------------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-------------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      .   .+++.+.++++|++||++|....             .+.+...+++|+.++..+++.+.+.   .+..+++++
T Consensus        57 ~---~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~i  130 (235)
T PRK09009         57 E---IKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVI  130 (235)
T ss_pred             H---HHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEE
Confidence            1   22233445689999999997531             2345668999999999998888653   123466655

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.3e-12  Score=93.06  Aligned_cols=119  Identities=14%  Similarity=0.140  Sum_probs=80.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++||||+|+||.++++.|++.|+   .|++++|+..  ...+...++...            ....+.++.+|+++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~---~vv~~~r~~~--~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~   63 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA---ELFLTDRDAD--GLAQTVADARAL------------GGTVPEHRALDISDYD   63 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHhc------------CCCcceEEEeeCCCHH
Confidence            4799999999999999999999986   5777777532  122222222110            1123456789998855


Q ss_pred             CCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceEecC
Q psy11862         91 LGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~S  152 (152)
                            ++.++       +.++|++||++|...       ..+++...+++|+.++..+++++.+.    ...+++|++|
T Consensus        64 ------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~is  137 (272)
T PRK07832         64 ------AVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVS  137 (272)
T ss_pred             ------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence                  33332       346899999998643       24566778999999999999997541    1235787765

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.44  E-value=3.9e-12  Score=91.14  Aligned_cols=127  Identities=17%  Similarity=0.143  Sum_probs=82.5

Q ss_pred             cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-----HHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-----PKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      +++++++||||+|  +||++++++|+++|+   +|++..|......     ..+....+.     +.++    ....++.
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~---~vi~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~g~~~~   71 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGA---DIFFTYWTAYDKEMPWGVDQDEQIQLQ-----EELL----KNGVKVS   71 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCC---eEEEEecccccccccccccHHHHHHHH-----HHHH----hcCCeEE
Confidence            6789999999995  899999999999986   5565543211100     011111110     0111    1135788


Q ss_pred             EEEcccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---C
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---K  143 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~  143 (152)
                      ++.+|+++++      ++.+++       ..+|++||+||....       .+.+...+++|+.++..+.+++.+.   .
T Consensus        72 ~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  145 (256)
T PRK12859         72 SMELDLTQND------APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK  145 (256)
T ss_pred             EEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc
Confidence            8999999865      344333       357999999986531       4567778999999999987666432   1


Q ss_pred             CCcceEecC
Q psy11862        144 KLVVSLDIG  152 (152)
Q Consensus       144 ~~~~~v~~S  152 (152)
                      +.++||++|
T Consensus       146 ~~g~iv~is  154 (256)
T PRK12859        146 SGGRIINMT  154 (256)
T ss_pred             CCeEEEEEc
Confidence            245888875

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.44  E-value=2.5e-12  Score=92.45  Aligned_cols=121  Identities=10%  Similarity=0.109  Sum_probs=82.8

Q ss_pred             ccCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++++++||||++  +||.++++.|+++|+   +|++..|+.   ...+.++++...             .....++.+
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~---~v~~~~r~~---~~~~~~~~l~~~-------------~g~~~~~~~   65 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGA---ELWFTYQSE---VLEKRVKPLAEE-------------IGCNFVSEL   65 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCC---EEEEEeCch---HHHHHHHHHHHh-------------cCCceEEEc
Confidence            36789999999997  899999999999986   566666642   122333333211             011235689


Q ss_pred             ccCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCC
Q psy11862         85 DILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKL  145 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~  145 (152)
                      |+++++      ++.++       +.++|++|||+|...           ..+.|...+++|+.+++.+++.+.+. ..-
T Consensus        66 Dv~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~  139 (260)
T PRK06603         66 DVTNPK------SISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG  139 (260)
T ss_pred             cCCCHH------HHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence            999965      34333       346899999998632           14567789999999999999887642 122


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      .++|++|
T Consensus       140 G~Iv~is  146 (260)
T PRK06603        140 GSIVTLT  146 (260)
T ss_pred             ceEEEEe
Confidence            5777764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.43  E-value=2.7e-12  Score=92.31  Aligned_cols=121  Identities=14%  Similarity=0.151  Sum_probs=81.9

Q ss_pred             ccCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++++++||||  +++||.+++++|++.|+   +|++..|..   ...+.++++...             ......+.+
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~---~v~~~~~~~---~~~~~~~~~~~~-------------~~~~~~~~~   63 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGA---ELAFTYVGD---RFKDRITEFAAE-------------FGSDLVFPC   63 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCC---eEEEEccch---HHHHHHHHHHHh-------------cCCcceeec
Confidence            367899999996  68999999999999997   555555431   112333332110             012246789


Q ss_pred             ccCCCCCCCChhHHHHH-------hccccEEEecccccc------------chhhHHHHHHhhhHHHHHHHHHHHhc-CC
Q psy11862         85 DILQANLGIKDSDLLML-------QEEVSVVFNGAASLK------------LEAELKENVAANTRGTQRLLDIALKM-KK  144 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~  144 (152)
                      |+++++      ++.++       +.++|++|||||...            ..++|+..+++|+.++..+.+++.+. .+
T Consensus        64 Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~  137 (260)
T PRK06997         64 DVASDE------QIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD  137 (260)
T ss_pred             cCCCHH------HHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence            999865      34333       347899999998642            13467778999999999999988763 12


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      .+++|++|
T Consensus       138 ~g~Ii~is  145 (260)
T PRK06997        138 DASLLTLS  145 (260)
T ss_pred             CceEEEEe
Confidence            25677664

>KOG1208|consensus

Probab=99.43  E-value=5.9e-13  Score=97.76  Aligned_cols=129  Identities=19%  Similarity=0.250  Sum_probs=89.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC-CCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR-GLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .+.+++++|||+++|||.+++++|+.+|   ..|++.+|+.. ...+.+.+..              +.....+.++.+|
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~~--------------~~~~~~i~~~~lD   94 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQK--------------GKANQKIRVIQLD   94 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHHh--------------cCCCCceEEEECC
Confidence            3577899999999999999999999998   48899999752 1222222222              1224678899999


Q ss_pred             cCCCCCCCC-hhHHHHHhccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         86 ILQANLGIK-DSDLLMLQEEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +++...-.. .+.+.+...+.|++|+|||+...     .+-++..+.+|+.|++.|.+++.+.   ....|+|++|
T Consensus        95 Lssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vs  170 (314)
T KOG1208|consen   95 LSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVS  170 (314)
T ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEc
Confidence            999552000 11222223478999999998653     2345668999999999998887642   1236888876

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.43  E-value=1.2e-12  Score=95.02  Aligned_cols=94  Identities=23%  Similarity=0.291  Sum_probs=74.0

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +++||||+|++|+++++.|++.|+   .|++++|.                                    .+|+.+++ 
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~---~v~~~~r~------------------------------------~~d~~~~~-   40 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGR---VVVALTSS------------------------------------QLDLTDPE-   40 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCC---EEEEeCCc------------------------------------ccCCCCHH-
Confidence            489999999999999999999987   56776652                                    25776643 


Q ss_pred             CCChhHHHHHhcc--ccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         92 GIKDSDLLMLQEE--VSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        92 ~~~~~~~~~~~~~--~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                           ++.+.+++  +|+|||+++.....   ......+++|+.++.++++++.+. +. +||++|
T Consensus        41 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~S   99 (287)
T TIGR01214        41 -----ALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHIS   99 (287)
T ss_pred             -----HHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEe
Confidence                 67777775  49999999975432   345668899999999999999886 43 788876

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.42  E-value=2.7e-12  Score=91.03  Aligned_cols=119  Identities=16%  Similarity=0.172  Sum_probs=79.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEE-eecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYI-LCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +++++||||+|+||++++++|+++|+   .|++ ..|+..  ...+....+..             ....+..+.+|++|
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~---~v~~~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~d   62 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGY---TVAVNYQQNLH--AAQEVVNLITQ-------------AGGKAFVLQADISD   62 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCChH--HHHHHHHHHHh-------------CCCeEEEEEccCCC
Confidence            36899999999999999999999987   4444 334321  12222222211             12457889999998


Q ss_pred             CCCCCChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc------CCCcc
Q psy11862         89 ANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM------KKLVV  147 (152)
Q Consensus        89 ~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~  147 (152)
                      ++      ++.+++       .++|++||++|....        .+.++..+++|+.++..+.+++.+.      .+.++
T Consensus        63 ~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~  136 (247)
T PRK09730         63 EN------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGA  136 (247)
T ss_pred             HH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcE
Confidence            65      344443       357999999996421        3456678999999999888776542      11245


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      ||++|
T Consensus       137 ~v~~s  141 (247)
T PRK09730        137 IVNVS  141 (247)
T ss_pred             EEEEC
Confidence            88775

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.42  E-value=3.7e-12  Score=89.86  Aligned_cols=117  Identities=19%  Similarity=0.252  Sum_probs=82.1

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      ++|||++|+||+++++.|+++|+   +|++++|+... ...+....+..             ...++.++.+|++++.  
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~---~v~~~~r~~~~-~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~--   61 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA---KVIITYRSSEE-GAEEVVEELKA-------------YGVKALGVVCDVSDRE--   61 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCchh-HHHHHHHHHHh-------------cCCceEEEEecCCCHH--
Confidence            58999999999999999999987   67788775421 11111111111             1246788999998865  


Q ss_pred             CChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         93 IKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        93 ~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                          ++.+++       .++|++||++|....       .+.+...+++|+.++..+++++.+.   .+.++|+++|
T Consensus        62 ----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~s  134 (239)
T TIGR01830        62 ----DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINIS  134 (239)
T ss_pred             ----HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence                344443       357999999997531       3556778999999999999988652   2346888875

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.42  E-value=6.5e-12  Score=90.17  Aligned_cols=124  Identities=23%  Similarity=0.234  Sum_probs=84.2

Q ss_pred             ccCCceEEEcCCcc-hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTG-FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G-~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .+++++++||||+| +||+++++.|+++|+   .|++.+|+..  ...+....+..         .  ....++.++.+|
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~---~V~~~~~~~~--~~~~~~~~~~~---------~--~~~~~~~~~~~D   77 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA---RVVISDIHER--RLGETADELAA---------E--LGLGRVEAVVCD   77 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHH---------h--cCCceEEEEEcc
Confidence            46789999999996 899999999999987   5677776532  22222222111         0  011467888999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-Ccc
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-LVV  147 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~  147 (152)
                      +++++      ++.+++       .++|++||++|...       ..+.+...+++|+.++..+++++.+.   .+ ..+
T Consensus        78 l~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~  151 (262)
T PRK07831         78 VTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGV  151 (262)
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence            98854      344333       46899999999642       13567778999999999998887642   12 346


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      ++++|
T Consensus       152 iv~~s  156 (262)
T PRK07831        152 IVNNA  156 (262)
T ss_pred             EEEeC
Confidence            66653

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.41  E-value=3.7e-12  Score=89.34  Aligned_cols=113  Identities=16%  Similarity=0.172  Sum_probs=80.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |++++|||++|+||+++++.|++.|+   +|++++|+..      ..+++..               ..+.++.+|+++.
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~---~v~~~~r~~~------~~~~~~~---------------~~~~~~~~D~~~~   56 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGW---RVIATARDAA------ALAALQA---------------LGAEALALDVADP   56 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCC---EEEEEECCHH------HHHHHHh---------------ccceEEEecCCCH
Confidence            46899999999999999999999986   6777887532      1111111               2345789999986


Q ss_pred             CCCCChhHHHHH---hc--cccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         90 NLGIKDSDLLML---QE--EVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~---~~--~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +      ++.++   +.  ++|++||++|...         ..++++..+++|+.++.++++++.+.  ....+++++|
T Consensus        57 ~------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~is  129 (222)
T PRK06953         57 A------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLS  129 (222)
T ss_pred             H------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEc
Confidence            5      34443   22  5899999999752         24567779999999999999988752  1223566654

>KOG1200|consensus

Probab=99.41  E-value=4.8e-12  Score=85.69  Aligned_cols=127  Identities=14%  Similarity=0.160  Sum_probs=88.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+..+.++||||+++||++++..|.+.|+   ++.+.+++..  .+++....+..              ..+...+.+|+
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Ga---rv~v~dl~~~--~A~ata~~L~g--------------~~~h~aF~~DV   71 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGA---RVAVADLDSA--AAEATAGDLGG--------------YGDHSAFSCDV   71 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCc---EEEEeecchh--hHHHHHhhcCC--------------CCccceeeecc
Confidence            35678999999999999999999999996   5666665443  22332222211              14677889999


Q ss_pred             CCCCCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-----CCCcceEecC
Q psy11862         87 LQANLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-----KKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~S  152 (152)
                      ++.+---. .+++.+.+..+++++||||+...       .+.|++.+.+|+.+.+...+++.+.     +..-++|.+|
T Consensus        72 S~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvs  150 (256)
T KOG1200|consen   72 SKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVS  150 (256)
T ss_pred             CcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeeh
Confidence            98651000 12233334478999999998763       6889999999999999998888653     1223677765

>PRK06484 short chain dehydrogenase; Validated

Probab=99.41  E-value=4.8e-12  Score=99.06  Aligned_cols=118  Identities=19%  Similarity=0.240  Sum_probs=84.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++++++|||++++||.+++++|+++|+   +|++++|+..  .+.+...++                ..++.++.+|++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~----------------~~~~~~~~~D~~   61 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGD---QVVVADRNVE--RARERADSL----------------GPDHHALAMDVS   61 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh----------------CCceeEEEeccC
Confidence            4678999999999999999999999986   6777777532  111111111                245678899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC-cc
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KKL-VV  147 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~  147 (152)
                      +++      ++.+++       .++|++|||||...         ..+++...+++|+.++..+++++.+.   .+. .+
T Consensus        62 ~~~------~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~  135 (520)
T PRK06484         62 DEA------QIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAA  135 (520)
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCe
Confidence            865      343333       46899999998631         14567889999999999999888653   122 37


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       136 iv~is  140 (520)
T PRK06484        136 IVNVA  140 (520)
T ss_pred             EEEEC
Confidence            87765

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.40  E-value=3e-12  Score=90.01  Aligned_cols=114  Identities=22%  Similarity=0.185  Sum_probs=80.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++|||++|++|+++++.|++.|+   .|++++|++...   +.+.+                 ..++.++.+|++++
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~~---~~~~~-----------------~~~~~~~~~D~~d~   57 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGW---QVTATVRGPQQD---TALQA-----------------LPGVHIEKLDMNDP   57 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCC---EEEEEeCCCcch---HHHHh-----------------ccccceEEcCCCCH
Confidence            36899999999999999999999986   678888875421   11211                 13466778899885


Q ss_pred             CCCCChhHHHHHhc-----cccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhcC--CCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE-----EVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKMK--KLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~S  152 (152)
                      +      ++.++++     ++|++||++|....         ..++...+.+|+.++..+.+++.+..  +..+++++|
T Consensus        58 ~------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~s  130 (225)
T PRK08177         58 A------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMS  130 (225)
T ss_pred             H------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEc
Confidence            4      3444433     58999999987531         34566688899999999988886531  223555543

>PRK07069 short chain dehydrogenase; Validated

Probab=99.40  E-value=1e-11  Score=88.40  Aligned_cols=119  Identities=16%  Similarity=0.130  Sum_probs=76.6

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +++||||+|+||+++++.|+++|+   +|++++|+... ...+....+...           .....+..+.+|+++++ 
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~---~v~~~~r~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~-   64 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA---KVFLTDINDAA-GLDAFAAEINAA-----------HGEGVAFAAVQDVTDEA-   64 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcch-HHHHHHHHHHhc-----------CCCceEEEEEeecCCHH-
Confidence            389999999999999999999986   67888876321 111111111110           00123456788998865 


Q ss_pred             CCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHH----HHhcCCCcceEecC
Q psy11862         92 GIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDI----ALKMKKLVVSLDIG  152 (152)
Q Consensus        92 ~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~S  152 (152)
                           ++.++       +.++|++||++|....       .+++...+++|+.+.+.+.+.    +.+. +.++||++|
T Consensus        65 -----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~s  137 (251)
T PRK07069         65 -----QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNIS  137 (251)
T ss_pred             -----HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEec
Confidence                 34333       3468999999997542       345667889999865555444    4443 456888775

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.40  E-value=7.4e-12  Score=88.58  Aligned_cols=117  Identities=14%  Similarity=0.144  Sum_probs=79.9

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      ++||||+|+||.+++++|+++|+   +|++++|+... ...+...++..             ...++.++.+|+++++  
T Consensus         1 vlItGas~giG~~~a~~l~~~G~---~v~~~~~~~~~-~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~--   61 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGF---EICVHYHSGRS-DAESVVSAIQA-------------QGGNARLLQFDVADRV--   61 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCCHH-HHHHHHHHHHH-------------cCCeEEEEEccCCCHH--
Confidence            58999999999999999999986   56677664321 11111111111             1256889999999865  


Q ss_pred             CChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHH-h---cCCCcceEecC
Q psy11862         93 IKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIAL-K---MKKLVVSLDIG  152 (152)
Q Consensus        93 ~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~-~---~~~~~~~v~~S  152 (152)
                          ++..++       .++|++||++|...       ..+++..++++|+.++.++++++. .   ..+.+++|++|
T Consensus        62 ----~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vs  135 (239)
T TIGR01831        62 ----ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLA  135 (239)
T ss_pred             ----HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEc
Confidence                343333       36799999998643       245677789999999999988763 1   12345788775

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.39  E-value=4.7e-12  Score=89.10  Aligned_cols=113  Identities=17%  Similarity=0.073  Sum_probs=80.9

Q ss_pred             EEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCC
Q psy11862         14 LVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGI   93 (152)
Q Consensus        14 lItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   93 (152)
                      +||||+|++|++++++|+++|+   .|++++|+..  ...+....+         .     ...++.++.+|+++++   
T Consensus         1 lItGas~~iG~~~a~~l~~~G~---~v~~~~r~~~--~~~~~~~~~---------~-----~~~~~~~~~~Dl~~~~---   58 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGA---RVTIASRSRD--RLAAAARAL---------G-----GGAPVRTAALDITDEA---   58 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHH---------h-----cCCceEEEEccCCCHH---
Confidence            5999999999999999999986   6788887532  111111111         0     0256788999999865   


Q ss_pred             ChhHHHHHhc---cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         94 KDSDLLMLQE---EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        94 ~~~~~~~~~~---~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                         ++.++++   ++|++||++|....       .+.++.++++|+.++.+++++.... +.+++|++|
T Consensus        59 ---~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~s  123 (230)
T PRK07041         59 ---AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFVS  123 (230)
T ss_pred             ---HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEEC
Confidence               5655554   58999999986431       4567778999999999999955443 456888765

>KOG0725|consensus

Probab=99.39  E-value=1.3e-11  Score=89.18  Aligned_cols=131  Identities=24%  Similarity=0.256  Sum_probs=87.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+.+++++|||++.+||+++++.|++.|.   +|++.+|+..  ...+...++...          .....++..+.+|+
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga---~v~i~~r~~~--~~~~~~~~~~~~----------~~~~~~~~~~~~Dv   69 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGA---KVVITGRSEE--RLEETAQELGGL----------GYTGGKVLAIVCDV   69 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHhc----------CCCCCeeEEEECcC
Confidence            47899999999999999999999999995   8888888654  222333332221          11136788999999


Q ss_pred             CCCCCC--CChhHHHHHhccccEEEeccccccc--------hhhHHHHHHhhhHH-HHHHHHHHHhc---CCCcceEecC
Q psy11862         87 LQANLG--IKDSDLLMLQEEVSVVFNGAASLKL--------EAELKENVAANTRG-TQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~--~~~~~~~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~-~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +++...  +....+.+.+.++|+++||||....        ++.|+.++++|+.+ .+.+.+.+..+   .+...++++|
T Consensus        70 ~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~s  149 (270)
T KOG0725|consen   70 SKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNIS  149 (270)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEe
Confidence            875410  0011122224579999999997642        67788899999995 66666666543   1234555543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.39  E-value=9.1e-12  Score=88.60  Aligned_cols=121  Identities=15%  Similarity=0.171  Sum_probs=81.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|||++|+||.++++.|+++|+   +|++++|+..  ...+..+++..             ...++.++.+|++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~---~vi~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   64 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGA---KLALIDLNQE--KLEEAVAECGA-------------LGTEVRGYAANVT   64 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence            5688999999999999999999999986   6777777542  11221121111             1356788999998


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc----------------chhhHHHHHHhhhHHHHHHHHHHHhc--
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK----------------LEAELKENVAANTRGTQRLLDIALKM--  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~----------------~~~~~~~~~~~n~~~~~~l~~~~~~~--  142 (152)
                      +++      ++.+++       .++|+|||++|...                ..+.+..++++|+.++..+.+.+.+.  
T Consensus        65 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~  138 (253)
T PRK08217         65 DEE------DVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMI  138 (253)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            854      233222       35799999998532                12456668899999999887765431  


Q ss_pred             --CCCcceEecC
Q psy11862        143 --KKLVVSLDIG  152 (152)
Q Consensus       143 --~~~~~~v~~S  152 (152)
                        ....+++++|
T Consensus       139 ~~~~~~~iv~~s  150 (253)
T PRK08217        139 ESGSKGVIINIS  150 (253)
T ss_pred             hcCCCeEEEEEc
Confidence              1224566654

>PLN00015 protochlorophyllide reductase

Probab=99.37  E-value=8.1e-12  Score=91.92  Aligned_cols=115  Identities=15%  Similarity=0.153  Sum_probs=79.6

Q ss_pred             EEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         14 LVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        14 lItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      +||||+++||.+++++|+++| +   +|++.+|+..  ...+...++.             .....+.++.+|+++.+  
T Consensus         1 lITGas~GIG~aia~~l~~~G~~---~V~~~~r~~~--~~~~~~~~l~-------------~~~~~~~~~~~Dl~d~~--   60 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKW---HVVMACRDFL--KAERAAKSAG-------------MPKDSYTVMHLDLASLD--   60 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCC---EEEEEeCCHH--HHHHHHHHhc-------------CCCCeEEEEEecCCCHH--
Confidence            599999999999999999998 6   6677777532  1111111111             11246778899999865  


Q ss_pred             CChhHHHHHh-------ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc---CC--CcceEecC
Q psy11862         93 IKDSDLLMLQ-------EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM---KK--LVVSLDIG  152 (152)
Q Consensus        93 ~~~~~~~~~~-------~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~~v~~S  152 (152)
                          ++.+++       .++|++|||||....        .+.++..+++|+.+++.+++++.+.   .+  .+++|++|
T Consensus        61 ----~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vs  136 (308)
T PLN00015         61 ----SVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVG  136 (308)
T ss_pred             ----HHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEe
Confidence                343332       368999999997421        3567789999999999998887542   12  35888875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.37  E-value=1.3e-11  Score=99.40  Aligned_cols=124  Identities=19%  Similarity=0.125  Sum_probs=84.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   .|++++|+..  ...+....+..         .  .....+..+.+|+
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga---~Vvi~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~v~~Dv  474 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGA---HVVLADLNLE--AAEAVAAEING---------Q--FGAGRAVALKMDV  474 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCCHH--HHHHHHHHHHh---------h--cCCCcEEEEECCC
Confidence            46789999999999999999999999986   6778887532  11111111110         0  0113567889999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh----cCCCcce
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK----MKKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~  148 (152)
                      ++++      ++.+++.       ++|++|||||....       .+.+...+++|+.+.+.+.+.+..    .+...++
T Consensus       475 td~~------~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~I  548 (676)
T TIGR02632       475 TDEQ------AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNI  548 (676)
T ss_pred             CCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence            9865      4544443       78999999997531       355777889999998888766543    2112478


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       549 V~iS  552 (676)
T TIGR02632       549 VFIA  552 (676)
T ss_pred             EEEe
Confidence            8765

>PRK08324 short chain dehydrogenase; Validated

Probab=99.37  E-value=8.1e-12  Score=100.74  Aligned_cols=120  Identities=20%  Similarity=0.217  Sum_probs=85.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.+++++||||+|+||+++++.|++.|+   .|++++|+..  ...+....+..              ...+.++.+|++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga---~Vvl~~r~~~--~~~~~~~~l~~--------------~~~v~~v~~Dvt  480 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGA---CVVLADLDEE--AAEAAAAELGG--------------PDRALGVACDVT  480 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcC---EEEEEeCCHH--HHHHHHHHHhc--------------cCcEEEEEecCC
Confidence            5789999999999999999999999986   6788888643  11111111100              136788999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC-cceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKL-VVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v  149 (152)
                      +++      ++.+++       .++|++||+||...       ..+.+...+++|+.++..+++++.+.   .+. ++||
T Consensus       481 d~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV  554 (681)
T PRK08324        481 DEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIV  554 (681)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            864      344433       37899999999643       24567778999999999998887542   132 5788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       555 ~vs  557 (681)
T PRK08324        555 FIA  557 (681)
T ss_pred             EEC
Confidence            765

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.36  E-value=1.3e-11  Score=85.29  Aligned_cols=100  Identities=17%  Similarity=0.244  Sum_probs=74.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|.++ +   .|++.+|+..                                .+.+|+++++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~---~vi~~~r~~~--------------------------------~~~~D~~~~~   44 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-H---EVITAGRSSG--------------------------------DVQVDITDPA   44 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-C---cEEEEecCCC--------------------------------ceEecCCChH
Confidence            47999999999999999999887 4   6777776421                                2478998865


Q ss_pred             CCCChhHHHHHh---ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         91 LGIKDSDLLMLQ---EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~---~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                            ++++++   .++|++||++|....       .+++.+.+++|+.++.++++++.+. ....+|+++|
T Consensus        45 ------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  111 (199)
T PRK07578         45 ------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS  111 (199)
T ss_pred             ------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence                  455444   478999999996431       4567778999999999999988652 1224677654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.36  E-value=5.3e-12  Score=90.74  Aligned_cols=93  Identities=29%  Similarity=0.324  Sum_probs=75.4

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +++|||++|.+|++|.+.|. .++   .|+.++|.                                    ..|+++++ 
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~---~v~a~~~~------------------------------------~~Ditd~~-   40 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEF---EVIATDRA------------------------------------ELDITDPD-   40 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCc---eEEeccCc------------------------------------cccccChH-
Confidence            49999999999999999997 323   66776652                                    26898865 


Q ss_pred             CCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         92 GIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        92 ~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                           .+.+.++  ++|+|||+|++...   +.+....+.+|..++.+++++|.+.+  .++||+|
T Consensus        41 -----~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiS   99 (281)
T COG1091          41 -----AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHIS   99 (281)
T ss_pred             -----HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEee
Confidence                 5777777  68999999998875   55667799999999999999999973  3778776

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.36  E-value=7.3e-12  Score=90.92  Aligned_cols=104  Identities=22%  Similarity=0.211  Sum_probs=71.4

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      |+||||+|+||+++++.|++.|+   .|++++|+.......                       ....+  .++.. .  
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~-----------------------~~~~~--~~~~~-~--   49 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGH---EVTILTRSPPAGANT-----------------------KWEGY--KPWAP-L--   49 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCC---EEEEEeCCCCCCCcc-----------------------cceee--ecccc-c--
Confidence            68999999999999999999986   788899876422100                       00001  11111 1  


Q ss_pred             CChhHHHHHhccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhcCCC--cceEecC
Q psy11862         93 IKDSDLLMLQEEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKMKKL--VVSLDIG  152 (152)
Q Consensus        93 ~~~~~~~~~~~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~v~~S  152 (152)
                          .+...+.++|+|||+||....     ......+++.|+.++.++++++... ++  .+|++.|
T Consensus        50 ----~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S  111 (292)
T TIGR01777        50 ----AESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISAS  111 (292)
T ss_pred             ----chhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEee
Confidence                244556789999999996542     1234567899999999999999987 44  3455543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK05599 hypothetical protein; Provisional

Probab=99.35  E-value=2.2e-11  Score=86.86  Aligned_cols=124  Identities=15%  Similarity=0.144  Sum_probs=77.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+++||.+++++|.+ |+   +|++.+|+..  .+.+..+++...            ....+.++.+|++|++
T Consensus         1 ~~vlItGas~GIG~aia~~l~~-g~---~Vil~~r~~~--~~~~~~~~l~~~------------~~~~~~~~~~Dv~d~~   62 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLCH-GE---DVVLAARRPE--AAQGLASDLRQR------------GATSVHVLSFDAQDLD   62 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHhC-CC---EEEEEeCCHH--HHHHHHHHHHhc------------cCCceEEEEcccCCHH
Confidence            5799999999999999999984 75   6788888643  222222222110            1134778999999965


Q ss_pred             CCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEecC
Q psy11862         91 LGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK----MKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~S  152 (152)
                      .--. .+++.+...++|++|||+|....       ...+.+++++|+.+...+.+.+.+    ....+++|++|
T Consensus        63 ~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~is  136 (246)
T PRK05599         63 THRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFS  136 (246)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            2000 11122223478999999997532       223445677888888777665532    21135787765

>PRK08017 oxidoreductase; Provisional

Probab=99.35  E-value=2.3e-11  Score=86.88  Aligned_cols=111  Identities=20%  Similarity=0.166  Sum_probs=76.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++||||+|+||+++++.|+++|+   +|++++|+..      +++....               .++..+.+|+.+.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~---~v~~~~r~~~------~~~~~~~---------------~~~~~~~~D~~~~~   58 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY---RVLAACRKPD------DVARMNS---------------LGFTGILLDLDDPE   58 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HhHHHHh---------------CCCeEEEeecCCHH
Confidence            6899999999999999999999986   6777777532      1221111               23567889998854


Q ss_pred             CCCChhHHHHHh--------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHH----hcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQ--------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIAL----KMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~--------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~  151 (152)
                            ++...+        ..+|.++|++|...       ..+.++..++.|+.++.++.+.+.    +. +.+++|++
T Consensus        59 ------~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~  131 (256)
T PRK08017         59 ------SVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMT  131 (256)
T ss_pred             ------HHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEE
Confidence                  333222        35789999998643       134566789999999888755543    33 45677776


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       132 s  132 (256)
T PRK08017        132 S  132 (256)
T ss_pred             c
Confidence            5

>KOG4169|consensus

Probab=99.34  E-value=6.9e-12  Score=86.70  Aligned_cols=110  Identities=22%  Similarity=0.299  Sum_probs=80.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ++|+++++||+.|+||++++++|+..|.  ..+.+..|.+.    .+.+.++.+           ....+.+.++++|++
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgi--k~~~i~~~~En----~~a~akL~a-----------i~p~~~v~F~~~DVt   65 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGI--KVLVIDDSEEN----PEAIAKLQA-----------INPSVSVIFIKCDVT   65 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCc--hheeehhhhhC----HHHHHHHhc-----------cCCCceEEEEEeccc
Confidence            5699999999999999999999999964  44555554333    222222221           112478889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      ++.      ++++.+       +.+|++||+||+.+ +.+++..+.+|+.+..+-..++.+
T Consensus        66 ~~~------~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alp  119 (261)
T KOG4169|consen   66 NRG------DLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALP  119 (261)
T ss_pred             cHH------HHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhh
Confidence            965      344444       47899999999876 778999999999887776666543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.34  E-value=2.3e-11  Score=86.00  Aligned_cols=119  Identities=15%  Similarity=0.189  Sum_probs=81.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH-HHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++|||++|++|+++++.|++.|+   .|++.+|+..  . .+.+ .....              ...+.++.+|+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~---~V~~~~r~~~--~-~~~~~~~~~~--------------~~~~~~~~~Dl   62 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGA---QVCINSRNEN--K-LKRMKKTLSK--------------YGNIHYVVGDV   62 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHHHh--------------cCCeEEEECCC
Confidence            4678999999999999999999999986   6788888532  1 1111 11110              13578889999


Q ss_pred             CCCCCCCChhHHHHH-------hccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         87 LQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      ++++      ++.++       +.++|.+||+++....     .+.+...++.|+.++..+++.+.+. ....++|++|
T Consensus        63 ~~~~------~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s  135 (238)
T PRK05786         63 SSTE------SARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVS  135 (238)
T ss_pred             CCHH------HHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEe
Confidence            9865      34333       3357999999985421     2445667899999999888887663 1224666654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.34  E-value=2.4e-11  Score=87.01  Aligned_cols=119  Identities=19%  Similarity=0.177  Sum_probs=79.0

Q ss_pred             eEEEcCCcchhHHHHHHHHHh----hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLR----SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~----~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++||||+++||.+++++|++    .|+   .|++.+|+..  .+.+...++..         .  .....+.++.+|++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~---~V~~~~r~~~--~~~~~~~~l~~---------~--~~~~~v~~~~~Dl~   65 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGS---VLVLSARNDE--ALRQLKAEIGA---------E--RSGLRVVRVSLDLG   65 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCc---EEEEEEcCHH--HHHHHHHHHHh---------c--CCCceEEEEEeccC
Confidence            689999999999999999987    565   6788888643  22222222211         0  01246788999999


Q ss_pred             CCCCCCChhHHHHHhc-------c----ccEEEeccccccc----------hhhHHHHHHhhhHHHHHHHHHHHhc----
Q psy11862         88 QANLGIKDSDLLMLQE-------E----VSVVFNGAASLKL----------EAELKENVAANTRGTQRLLDIALKM----  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~----~d~vi~~a~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~----  142 (152)
                      +++      ++.++++       .    .|++|||||....          .+.+...+++|+.++..+.+++.+.    
T Consensus        66 ~~~------~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~  139 (256)
T TIGR01500        66 AEA------GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDS  139 (256)
T ss_pred             CHH------HHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhc
Confidence            865      3444332       1    2689999996321          2456778999999999988877642    


Q ss_pred             CC-CcceEecC
Q psy11862        143 KK-LVVSLDIG  152 (152)
Q Consensus       143 ~~-~~~~v~~S  152 (152)
                      ++ .+++|++|
T Consensus       140 ~~~~~~iv~is  150 (256)
T TIGR01500       140 PGLNRTVVNIS  150 (256)
T ss_pred             CCCCCEEEEEC
Confidence            11 24688765

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.33  E-value=3.7e-11  Score=88.19  Aligned_cols=138  Identities=10%  Similarity=0.070  Sum_probs=81.1

Q ss_pred             cCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccc-cCCcEEEEEc
Q psy11862          8 YAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPA-QLSRLHIIEG   84 (152)
Q Consensus         8 ~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   84 (152)
                      +++|+++|||+  +++||+++++.|++.|.   +|++ .|...  .+++......... .......... .......+.+
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga---~Vv~-~~~~~--~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   79 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA---EILV-GTWVP--ALNIFETSLRRGK-FDESRKLPDGSLMEITKVYPL   79 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC---EEEE-EeCcc--hhhHHHHhhhccc-cchhhhcccccccCcCeeeec
Confidence            78999999999  79999999999999995   6666 55332  1111111111100 0000000000 0112356788


Q ss_pred             cc--CCCC-C-----------CCChhHHHHH-------hccccEEEecccccc---------chhhHHHHHHhhhHHHHH
Q psy11862         85 DI--LQAN-L-----------GIKDSDLLML-------QEEVSVVFNGAASLK---------LEAELKENVAANTRGTQR  134 (152)
Q Consensus        85 D~--~~~~-~-----------~~~~~~~~~~-------~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~  134 (152)
                      |+  ++++ .           +...+++.++       +.++|++|||||...         ..+.|+..+++|+.+++.
T Consensus        80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~  159 (303)
T PLN02730         80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS  159 (303)
T ss_pred             ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence            88  3222 0           0001133333       346899999996421         146788899999999999


Q ss_pred             HHHHHHhc-CCCcceEecC
Q psy11862        135 LLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus       135 l~~~~~~~-~~~~~~v~~S  152 (152)
                      +.+++.+. ..-.++|++|
T Consensus       160 l~~~~~p~m~~~G~II~is  178 (303)
T PLN02730        160 LLQHFGPIMNPGGASISLT  178 (303)
T ss_pred             HHHHHHHHHhcCCEEEEEe
Confidence            99988753 1125777765

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.30  E-value=2e-11  Score=88.74  Aligned_cols=97  Identities=16%  Similarity=0.146  Sum_probs=72.6

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +|+||||||++|++++++|++.|+   .|.+++|++....                        ...+..+.+|+.|++ 
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~---~V~~~~R~~~~~~------------------------~~~~~~~~~d~~d~~-   52 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASV---PFLVASRSSSSSA------------------------GPNEKHVKFDWLDED-   52 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCC---cEEEEeCCCcccc------------------------CCCCccccccCCCHH-
Confidence            489999999999999999999987   5788898764210                        134556678998865 


Q ss_pred             CCChhHHHHHh------cc-ccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         92 GIKDSDLLMLQ------EE-VSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        92 ~~~~~~~~~~~------~~-~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                           .+...+      ++ +|.++|+++...  ..        .....+++++|++. +++|||++|
T Consensus        53 -----~l~~a~~~~~~~~g~~d~v~~~~~~~~--~~--------~~~~~~~i~aa~~~-gv~~~V~~S  104 (285)
T TIGR03649        53 -----TWDNPFSSDDGMEPEISAVYLVAPPIP--DL--------APPMIKFIDFARSK-GVRRFVLLS  104 (285)
T ss_pred             -----HHHHHHhcccCcCCceeEEEEeCCCCC--Ch--------hHHHHHHHHHHHHc-CCCEEEEee
Confidence                 577777      56 999999876431  11        23445788899887 799999986

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.29  E-value=2.5e-11  Score=97.76  Aligned_cols=93  Identities=24%  Similarity=0.234  Sum_probs=69.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ..|+++||||+|+||+++++.|.+.|+++   .. .                                      .+|++|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v---~~-~--------------------------------------~~~l~d  416 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAY---EY-G--------------------------------------KGRLED  416 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeE---Ee-e--------------------------------------cccccc
Confidence            45789999999999999999999887632   11 0                                      134555


Q ss_pred             CCCCCChhHHHHHhc--cccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEe
Q psy11862         89 ANLGIKDSDLLMLQE--EVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKMKKLVVSLD  150 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  150 (152)
                      ..      .+...+.  ++|+|||+|+..+.      ..+....+++|+.++.+++++|.+. +++.+++
T Consensus       417 ~~------~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~~v~~  479 (668)
T PLN02260        417 RS------SLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLLMMNF  479 (668)
T ss_pred             HH------HHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCeEEEE
Confidence            33      3555554  78999999997632      2356678999999999999999997 6655443

>KOG1429|consensus

Probab=99.29  E-value=7.3e-12  Score=89.19  Aligned_cols=112  Identities=25%  Similarity=0.356  Sum_probs=81.2

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ...+|+||||+||||++|++.|..+|+   .|++++....+.  .+.+..+              .....++.+.-|+. 
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh---~VIa~Dn~ftg~--k~n~~~~--------------~~~~~fel~~hdv~-   85 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGH---EVIALDNYFTGR--KENLEHW--------------IGHPNFELIRHDVV-   85 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCC---eEEEEecccccc--hhhcchh--------------ccCcceeEEEeech-
Confidence            457999999999999999999999996   778877654322  1111111              11245555555654 


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                                ..++..+|-|+|+|+..+.   ..++-+++..|+.++.+.+-.|++- + +||++.|
T Consensus        86 ----------~pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aS  140 (350)
T KOG1429|consen   86 ----------EPLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLAS  140 (350)
T ss_pred             ----------hHHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEee
Confidence                      3466788999999987653   4556668899999999999999986 3 6888765

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.28  E-value=5.3e-11  Score=105.77  Aligned_cols=135  Identities=13%  Similarity=0.119  Sum_probs=88.8

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH--------HHHHHHH-----hcCh---h--------
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP--------KARLAEF-----SKLP---V--------   64 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~--------~~~~~~~-----~~~~---~--------   64 (152)
                      ++++++||||+++||.+++++|++++ . .++++++|+......        .+.+...     ...+   .        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~-g-a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~ 2073 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQC-Q-AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALV 2073 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhc-C-CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcc
Confidence            57899999999999999999999983 2 378888987311000        0000000     0000   0        


Q ss_pred             -----hhhhhh---hccccCCcEEEEEcccCCCCCCCChhHHHHHhc------cccEEEecccccc-------chhhHHH
Q psy11862         65 -----FERLRK---ECPAQLSRLHIIEGDILQANLGIKDSDLLMLQE------EVSVVFNGAASLK-------LEAELKE  123 (152)
Q Consensus        65 -----~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~------~~d~vi~~a~~~~-------~~~~~~~  123 (152)
                           ..++..   .....+..+.++.+|++|.+      ++.+++.      ++|+|||+||...       ..+.|..
T Consensus      2074 ~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~------av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~ 2147 (2582)
T TIGR02813      2074 RPVLSSLEIAQALAAFKAAGASAEYASADVTNSV------SVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNA 2147 (2582)
T ss_pred             cccchhHHHHHHHHHHHhcCCcEEEEEccCCCHH------HHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHH
Confidence                 000000   01123457889999999965      3443332      5899999999753       2577888


Q ss_pred             HHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862        124 NVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus       124 ~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++++|+.+++++++++... ..++||++|
T Consensus      2148 v~~~nv~G~~~Ll~al~~~-~~~~IV~~S 2175 (2582)
T TIGR02813      2148 VYGTKVDGLLSLLAALNAE-NIKLLALFS 2175 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence            9999999999999998775 456788765

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN00016 RNA-binding protein; Provisional

Probab=99.28  E-value=4.3e-11  Score=90.44  Aligned_cols=103  Identities=21%  Similarity=0.281  Sum_probs=72.9

Q ss_pred             CCceEEEc----CCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-H----HHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862          9 AGRSVLVT----GGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-P----KARLAEFSKLPVFERLRKECPAQLSRL   79 (152)
Q Consensus         9 ~~~~ilIt----G~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (152)
                      .+++|+||    ||+|++|++++++|++.|+   .|++++|+..... .    ...+..+.               ...+
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~l~---------------~~~v  112 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH---EVTLFTRGKEPSQKMKKEPFSRFSELS---------------SAGV  112 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCC---EEEEEecCCcchhhhccCchhhhhHhh---------------hcCc
Confidence            45789999    9999999999999999997   6788888754210 0    00011110               1347


Q ss_pred             EEEEcccCCCCCCCChhHHHHHh--ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         80 HIIEGDILQANLGIKDSDLLMLQ--EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        80 ~~~~~D~~~~~~~~~~~~~~~~~--~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .++.+|+.+         +...+  .++|+|||+++.             +..++.++++++++. ++++||++|
T Consensus       113 ~~v~~D~~d---------~~~~~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~S  164 (378)
T PLN00016        113 KTVWGDPAD---------VKSKVAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCS  164 (378)
T ss_pred             eEEEecHHH---------HHhhhccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEc
Confidence            888899876         22232  478999998753             134677899999887 789999987

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.28  E-value=9.4e-11  Score=84.46  Aligned_cols=115  Identities=13%  Similarity=0.115  Sum_probs=73.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++||||+|+||++++++|++.|+   .|+++.|+.. ..+.+..+++..            .....+.++.+|++|++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~---~V~~~~~~~~-~~~~~~~~~l~~------------~~~~~~~~~~~Dv~d~~   65 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGY---RVVLHYHRSA-AAASTLAAELNA------------RRPNSAVTCQADLSNSA   65 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCC---eEEEEcCCcH-HHHHHHHHHHHh------------ccCCceEEEEccCCCch
Confidence            5799999999999999999999986   5666655421 112221222211            01235667899999975


Q ss_pred             CCC-ChhHH-H---HHhccccEEEeccccccc-------h-----------hhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         91 LGI-KDSDL-L---MLQEEVSVVFNGAASLKL-------E-----------AELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        91 ~~~-~~~~~-~---~~~~~~d~vi~~a~~~~~-------~-----------~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      .-. ..+++ .   +.+.++|++|||||....       .           ..+..++++|+.+++.+.+++.+
T Consensus        66 ~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  139 (267)
T TIGR02685        66 TLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ  139 (267)
T ss_pred             hhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            200 00111 1   123478999999996421       1           13667899999999999887653

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.26  E-value=5.9e-11  Score=83.93  Aligned_cols=102  Identities=22%  Similarity=0.276  Sum_probs=75.2

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      |+|+||+|.+|+.+++.|++.++   .|.++.|+.+    .+..+.+..               .+++++.+|+.+.   
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~---~V~~l~R~~~----~~~~~~l~~---------------~g~~vv~~d~~~~---   55 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF---SVRALVRDPS----SDRAQQLQA---------------LGAEVVEADYDDP---   55 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG---CEEEEESSSH----HHHHHHHHH---------------TTTEEEES-TT-H---
T ss_pred             CEEECCccHHHHHHHHHHHhCCC---CcEEEEeccc----hhhhhhhhc---------------ccceEeecccCCH---
Confidence            78999999999999999999775   6788999752    222332221               3567789999874   


Q ss_pred             CChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         93 IKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        93 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                         +.+.+.++++|.||.+.+...         ........++++++++. ++++||+.|
T Consensus        56 ---~~l~~al~g~d~v~~~~~~~~---------~~~~~~~~~li~Aa~~a-gVk~~v~ss  102 (233)
T PF05368_consen   56 ---ESLVAALKGVDAVFSVTPPSH---------PSELEQQKNLIDAAKAA-GVKHFVPSS  102 (233)
T ss_dssp             ---HHHHHHHTTCSEEEEESSCSC---------CCHHHHHHHHHHHHHHH-T-SEEEESE
T ss_pred             ---HHHHHHHcCCceEEeecCcch---------hhhhhhhhhHHHhhhcc-ccceEEEEE
Confidence               479999999999998876543         33355667899999998 699999753

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2865|consensus

Probab=99.24  E-value=2.2e-11  Score=86.93  Aligned_cols=119  Identities=18%  Similarity=0.194  Sum_probs=91.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++|-.+-|.|||||+|++++.+|.+.|.   .+++.-|-....     ...+..           -....++.++..|+
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GS---QviiPyR~d~~~-----~r~lkv-----------mGdLGQvl~~~fd~  118 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGS---QVIIPYRGDEYD-----PRHLKV-----------MGDLGQVLFMKFDL  118 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCC---eEEEeccCCccc-----hhheee-----------cccccceeeeccCC
Confidence            56778899999999999999999999995   666665543211     111111           11246788999999


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .|++      ++++.++..++|||+.|.--...++. +.++|+.++..|++.|+++ ++.|||++|
T Consensus       119 ~Ded------SIr~vvk~sNVVINLIGrd~eTknf~-f~Dvn~~~aerlAricke~-GVerfIhvS  176 (391)
T KOG2865|consen  119 RDED------SIRAVVKHSNVVINLIGRDYETKNFS-FEDVNVHIAERLARICKEA-GVERFIHVS  176 (391)
T ss_pred             CCHH------HHHHHHHhCcEEEEeeccccccCCcc-cccccchHHHHHHHHHHhh-Chhheeehh
Confidence            9854      79999999999999998643334443 7799999999999999998 899999987

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.23  E-value=3.8e-11  Score=85.60  Aligned_cols=123  Identities=24%  Similarity=0.273  Sum_probs=89.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +|++||||-||.-|.++++.|++.||   .|+.+.|+.+..+... + .+...         ......++.++.+|++|.
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY---~VhGi~Rrss~~n~~r-i-~L~~~---------~~~~~~~l~l~~gDLtD~   67 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGY---EVHGIKRRSSSFNTPR-I-HLYED---------PHLNDPRLHLHYGDLTDS   67 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCc---EEEEEeeccccCCccc-c-eeccc---------cccCCceeEEEeccccch
Confidence            68999999999999999999999998   7788888754332221 1 11111         112235689999999996


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccchhhH---HHHHHhhhHHHHHHHHHHHhcCC-CcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKLEAEL---KENVAANTRGTQRLLDIALKMKK-LVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~~~~~---~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~S  152 (152)
                      .      .+.++++  .+|.|+|+|+.++...++   ....+++..|+.+|+++.+-.+. ..+|+..|
T Consensus        68 ~------~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAS  130 (345)
T COG1089          68 S------NLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQAS  130 (345)
T ss_pred             H------HHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecc
Confidence            5      5777776  689999999988754333   34778888999999999987532 24565544

>PRK06720 hypothetical protein; Provisional

Probab=99.22  E-value=2.9e-10  Score=76.83  Aligned_cols=85  Identities=20%  Similarity=0.232  Sum_probs=59.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+++||.++++.|++.|+   +|++.+|+..  ...+...++..             ......++.+|++
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~---~V~l~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl~   75 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGA---KVIVTDIDQE--SGQATVEEITN-------------LGGEALFVSYDME   75 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence            5789999999999999999999999986   6777777532  11211122211             1245667899998


Q ss_pred             CCCCCCChhHHHH-------HhccccEEEecccccc
Q psy11862         88 QANLGIKDSDLLM-------LQEEVSVVFNGAASLK  116 (152)
Q Consensus        88 ~~~~~~~~~~~~~-------~~~~~d~vi~~a~~~~  116 (152)
                      +.+      ++.+       .+.++|++|||||...
T Consensus        76 ~~~------~v~~~v~~~~~~~G~iDilVnnAG~~~  105 (169)
T PRK06720         76 KQG------DWQRVISITLNAFSRIDMLFQNAGLYK  105 (169)
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            854      3333       3357899999999754

>KOG1611|consensus

Probab=99.21  E-value=1.9e-10  Score=79.55  Aligned_cols=116  Identities=25%  Similarity=0.252  Sum_probs=78.8

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .-+.++||||++|||..++++|++. .++..++...|++...  .+.++.+..             ..++++.++.|+++
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a--~~~l~~k~~-------------~d~rvHii~Ldvt~   65 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKA--ATELALKSK-------------SDSRVHIIQLDVTC   65 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHh--hHHHHHhhc-------------cCCceEEEEEeccc
Confidence            3467999999999999999999987 5665555555544321  333333221             14799999999998


Q ss_pred             CCCCCC-hhHHHHH--hccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHH
Q psy11862         89 ANLGIK-DSDLLML--QEEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIAL  140 (152)
Q Consensus        89 ~~~~~~-~~~~~~~--~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~  140 (152)
                      .+.--. ..++.++  .+++|.+|+|||+...        .+.+-+.+++|+.++..+.+++.
T Consensus        66 deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~l  128 (249)
T KOG1611|consen   66 DESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFL  128 (249)
T ss_pred             HHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHH
Confidence            662000 1123333  2367999999997542        34566789999999988887764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.19  E-value=7.3e-10  Score=78.90  Aligned_cols=129  Identities=20%  Similarity=0.211  Sum_probs=82.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccC-CcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQL-SRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~   86 (152)
                      +.+++++|||++++||.++++.|++.|+   .+++..|..... ..+.+.....            ... ..+.+..+|+
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~---~v~~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~~~~~Dv   66 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGA---RVVVAARRSEEE-AAEALAAAIK------------EAGGGRAAAVAADV   66 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---eEEEEcCCCchh-hHHHHHHHHH------------hcCCCcEEEEEecC
Confidence            5789999999999999999999998886   556666554321 1222221111            001 3577778999


Q ss_pred             CC-CCCC-CChhHHHHHhccccEEEecccccc----c----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQ-ANLG-IKDSDLLMLQEEVSVVFNGAASLK----L----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~-~~~~-~~~~~~~~~~~~~d~vi~~a~~~~----~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++ .+.. ...+++...+.++|++|||||...    .    .+.++..+.+|+.+...+.+++.+....+++|++|
T Consensus        67 s~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~is  142 (251)
T COG1028          67 SDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNIS  142 (251)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEEC
Confidence            87 4310 001122233346899999999742    1    46778899999999999888554421112677665

>KOG1610|consensus

Probab=99.17  E-value=4.1e-10  Score=81.43  Aligned_cols=120  Identities=19%  Similarity=0.266  Sum_probs=86.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ...++.|+|||+..+.|..++++|.+.|+   .|.+-.-.+.+   .+.++....              .++...+..|+
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf---~V~Agcl~~~g---ae~L~~~~~--------------s~rl~t~~LDV   85 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF---RVFAGCLTEEG---AESLRGETK--------------SPRLRTLQLDV   85 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCC---EEEEEeecCch---HHHHhhhhc--------------CCcceeEeecc
Confidence            45678999999999999999999999997   55555533322   233332221              36788889999


Q ss_pred             CCCCCCCChhHHHHHhc---------cccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcc
Q psy11862         87 LQANLGIKDSDLLMLQE---------EVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM--KKLVV  147 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~---------~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~  147 (152)
                      ++++      ++.+..+         +.-++|||||+...        .+++...+++|+.|+.++.++..+.  +.-+|
T Consensus        86 T~~e------si~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGR  159 (322)
T KOG1610|consen   86 TKPE------SVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGR  159 (322)
T ss_pred             CCHH------HHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCe
Confidence            9976      4554433         45789999996542        4677789999999999988887642  13358


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       160 vVnvs  164 (322)
T KOG1610|consen  160 VVNVS  164 (322)
T ss_pred             EEEec
Confidence            88875

>KOG0747|consensus

Probab=99.16  E-value=5.5e-11  Score=84.68  Aligned_cols=121  Identities=26%  Similarity=0.344  Sum_probs=88.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .+.++||||.||||++.+..+...-++. ..++++.-.-..+ .+.+.+..              ..+...++.+|+.+.
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~-~~v~idkL~~~s~-~~~l~~~~--------------n~p~ykfv~~di~~~   69 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDY-KFVNLDKLDYCSN-LKNLEPVR--------------NSPNYKFVEGDIADA   69 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCC-cEEEEeecccccc-cchhhhhc--------------cCCCceEeeccccch
Confidence            3789999999999999999999884443 5556654332222 22222221              237889999999886


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccchh---hHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKLEA---ELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .      .+..++.  .+|.|+|.|+..+...   +.-.....|+.++..|++.+...+++++||++|
T Consensus        70 ~------~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvS  131 (331)
T KOG0747|consen   70 D------LVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVS  131 (331)
T ss_pred             H------HHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEec
Confidence            5      2444443  7899999999876422   223367889999999999999988999999997

>KOG1207|consensus

Probab=99.11  E-value=1.5e-10  Score=77.29  Aligned_cols=119  Identities=21%  Similarity=0.234  Sum_probs=84.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+.|+.+++||++-+||++++.+|.+.|   ++|+.+.|.+.      .+..+.+.            .+.-+..+.+|+
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aG---A~ViAvaR~~a------~L~sLV~e------------~p~~I~Pi~~Dl   62 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAG---AQVIAVARNEA------NLLSLVKE------------TPSLIIPIVGDL   62 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcC---CEEEEEecCHH------HHHHHHhh------------CCcceeeeEecc
Confidence            4679999999999999999999999998   48899998643      33333221            124578889999


Q ss_pred             CCCCCCCChhHHHHHhc---cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQE---EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~S  152 (152)
                      ++-+      .+++.+.   .+|.++|+||..-       ..++++..+++|+.+...+.+...+    .+-...+|.+|
T Consensus        63 s~we------a~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvS  136 (245)
T KOG1207|consen   63 SAWE------ALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVS  136 (245)
T ss_pred             cHHH------HHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEec
Confidence            8732      3444433   5799999999653       1566777889999998888777443    22234566654

>KOG1209|consensus

Probab=99.08  E-value=6.5e-10  Score=76.52  Aligned_cols=117  Identities=18%  Similarity=0.191  Sum_probs=80.2

Q ss_pred             CCceEEEcC-CcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          9 AGRSVLVTG-GTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         9 ~~~~ilItG-~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ..++++||| +.|+||.++++.+.+.|+   .|++..|+.+.      +..+..              ..++.....|++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~---~V~AtaR~~e~------M~~L~~--------------~~gl~~~kLDV~   62 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY---LVYATARRLEP------MAQLAI--------------QFGLKPYKLDVS   62 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe---EEEEEccccch------HhhHHH--------------hhCCeeEEeccC
Confidence            357899998 678999999999999997   78888886542      222221              145778889999


Q ss_pred             CCCCCCChhHHHHHh-----ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQ-----EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-----~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~  151 (152)
                      +++.   ...+...+     .+.|+++||||..=       ..++.+..+++|+.|..+..++....  ...+.+|++
T Consensus        63 ~~~~---V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnv  137 (289)
T KOG1209|consen   63 KPEE---VVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNV  137 (289)
T ss_pred             ChHH---HHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEe
Confidence            8762   11122222     25799999999642       24566778999999988887776532  123466665

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.08  E-value=1.2e-09  Score=77.74  Aligned_cols=102  Identities=24%  Similarity=0.295  Sum_probs=68.5

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      |+||||||+||++++.+|.+.||   .|++++|++...  .+.+                   ...+.  ..+       
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh---~v~iltR~~~~~--~~~~-------------------~~~v~--~~~-------   47 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGH---QVTILTRRPPKA--SQNL-------------------HPNVT--LWE-------   47 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCC---eEEEEEcCCcch--hhhc-------------------Ccccc--ccc-------
Confidence            68999999999999999999997   778899976521  1100                   00111  111       


Q ss_pred             CChhHHHHHhc-cccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEec
Q psy11862         93 IKDSDLLMLQE-EVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKMK-KLVVSLDI  151 (152)
Q Consensus        93 ~~~~~~~~~~~-~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~  151 (152)
                          .+..... ++|+|||+||..-.     .+..+.+.+..+..|..|.++..... .++.++.-
T Consensus        48 ----~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isa  109 (297)
T COG1090          48 ----GLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISA  109 (297)
T ss_pred             ----hhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEec
Confidence                1333333 79999999996532     33445588899999999999987542 34455543

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.07  E-value=3.2e-09  Score=77.95  Aligned_cols=141  Identities=6%  Similarity=-0.011  Sum_probs=74.1

Q ss_pred             ccCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH-----HHHHHHH--hcChh---hhhhhhhccc
Q psy11862          7 WYAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP-----KARLAEF--SKLPV---FERLRKECPA   74 (152)
Q Consensus         7 ~~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~-----~~~~~~~--~~~~~---~~~~~~~~~~   74 (152)
                      .+++|+++|||++  .+||+++++.|+++|+   +|++.++.+.....     .+.....  ...+-   ...+..... 
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga---~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-   80 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGA---TILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA-   80 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCC---EEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhh-
Confidence            3689999999996  9999999999999996   56665432100000     0000000  00000   000000000 


Q ss_pred             cCCcEEEEEcccCCCC--CCCChhHH-------HHHhccccEEEecccccc---------chhhHHHHHHhhhHHHHHHH
Q psy11862         75 QLSRLHIIEGDILQAN--LGIKDSDL-------LMLQEEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLL  136 (152)
Q Consensus        75 ~~~~~~~~~~D~~~~~--~~~~~~~~-------~~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~  136 (152)
                      ......-+..|+.+..  -.++.+++       .+.+.++|++|||||...         ..+.|+..+++|+.++++++
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            0011122223332210  00011122       233457899999997531         14677889999999999999


Q ss_pred             HHHHhc-CCCcceEec
Q psy11862        137 DIALKM-KKLVVSLDI  151 (152)
Q Consensus       137 ~~~~~~-~~~~~~v~~  151 (152)
                      +++.+. ..-.+++++
T Consensus       161 ~a~~p~m~~~G~ii~i  176 (299)
T PRK06300        161 SHFGPIMNPGGSTISL  176 (299)
T ss_pred             HHHHHHhhcCCeEEEE
Confidence            998763 122456654

>KOG1014|consensus

Probab=99.06  E-value=1.4e-09  Score=78.54  Aligned_cols=124  Identities=23%  Similarity=0.263  Sum_probs=83.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ++=++|||||.+||++.+++|+++|.   +|++++|+++  .+...-.++...            ...++.++..|++++
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~---nvvLIsRt~~--KL~~v~kEI~~~------------~~vev~~i~~Dft~~  111 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGF---NVVLISRTQE--KLEAVAKEIEEK------------YKVEVRIIAIDFTKG  111 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCC---EEEEEeCCHH--HHHHHHHHHHHH------------hCcEEEEEEEecCCC
Confidence            36799999999999999999999997   6899999754  222221222211            135788999999886


Q ss_pred             CCCCChhHHHHHhc--cccEEEecccccc-c--------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLK-L--------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~-~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      ..  .-+.+++.+.  .+-++|||+|... .        ....++.+.+|+.++..+.+.....   .+.+-+|++|
T Consensus       112 ~~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~Ivnig  186 (312)
T KOG1014|consen  112 DE--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIG  186 (312)
T ss_pred             ch--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEec
Confidence            52  1233444444  4568999999765 1        2244567888999988888877642   1234556553

>KOG1210|consensus

Probab=98.97  E-value=9.6e-09  Score=74.40  Aligned_cols=120  Identities=21%  Similarity=0.221  Sum_probs=83.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++||||+.++|.+++..+..+|.   .|.+..|+..  .+.+...++..           .+...++.+..+|+.+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga---~Vti~ar~~~--kl~~a~~~l~l-----------~~~~~~v~~~S~d~~~Y~   97 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGA---DVTITARSGK--KLLEAKAELEL-----------LTQVEDVSYKSVDVIDYD   97 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccC---ceEEEeccHH--HHHHHHhhhhh-----------hhccceeeEeccccccHH
Confidence            5899999999999999999999996   5677777643  22222222211           111234779999997755


Q ss_pred             CCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CC---CcceEecC
Q psy11862         91 LGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KK---LVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~---~~~~v~~S  152 (152)
                            ++...++       .+|.+|+|||..-       .....+..+++|+.++.+.++++... ..   ..+++.+|
T Consensus        98 ------~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vs  171 (331)
T KOG1210|consen   98 ------SVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVS  171 (331)
T ss_pred             ------HHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEeh
Confidence                  3443333       5799999999542       25667779999999999999887643 11   23666654

>KOG1199|consensus

Probab=98.95  E-value=1.3e-09  Score=72.82  Aligned_cols=108  Identities=19%  Similarity=0.201  Sum_probs=81.4

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .+.++-..+||||.+++|++.++.|.++|.   .+.+++-..+..  .+...+                .+.++.+.+.|
T Consensus         5 rs~kglvalvtggasglg~ataerlakqga---sv~lldlp~skg--~~vake----------------lg~~~vf~pad   63 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGA---SVALLDLPQSKG--ADVAKE----------------LGGKVVFTPAD   63 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCc---eEEEEeCCcccc--hHHHHH----------------hCCceEEeccc
Confidence            356788999999999999999999999985   667777654432  111112                14788999999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------------chhhHHHHHHhhhHHHHHHHHHHH
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------------LEAELKENVAANTRGTQRLLDIAL  140 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~  140 (152)
                      ++++.      ++...+       .+.|..+||||+.-             ..++++..+++|+.++++++++..
T Consensus        64 vtsek------dv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a  132 (260)
T KOG1199|consen   64 VTSEK------DVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA  132 (260)
T ss_pred             cCcHH------HHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence            98854      554443       47899999999642             256788889999999999998864

>KOG4039|consensus

Probab=98.92  E-value=7.3e-09  Score=69.41  Aligned_cols=115  Identities=20%  Similarity=0.154  Sum_probs=87.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |+++..+|.||+|-.|..+++.+.+.+ ...+|+++.|++...                      +.....+.....|+.
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~-~FSKV~~i~RR~~~d----------------------~at~k~v~q~~vDf~   72 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAP-QFSKVYAILRRELPD----------------------PATDKVVAQVEVDFS   72 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcc-cceeEEEEEeccCCC----------------------ccccceeeeEEechH
Confidence            678899999999999999999999984 678999999975322                      112345666677775


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .      .+++...+.++|+.+.+-|.+....-.+-++++.-+....+++++++. ++++|+++|
T Consensus        73 K------l~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvS  130 (238)
T KOG4039|consen   73 K------LSQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVS  130 (238)
T ss_pred             H------HHHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEEe
Confidence            5      335666777999999998876543334556777777888888888886 899999886

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.91  E-value=3.8e-08  Score=72.76  Aligned_cols=119  Identities=11%  Similarity=-0.029  Sum_probs=82.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ..++++|.|+|++|.+|..++..|...+ -...+.++++........ ++...                ...  ....+.
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~-~~~elvL~Di~~~~g~a~-Dl~~~----------------~~~--~~v~~~   64 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNP-HVSELSLYDIVGAPGVAA-DLSHI----------------DTP--AKVTGY   64 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCC-CCCEEEEEecCCCccccc-chhhc----------------CcC--ceEEEe
Confidence            3577899999999999999999988664 234788888732111111 11100                111  122344


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++.      ++.+.++++|+||+++|.... ..++.+.+..|+..+.++++++.+. +++++|+++
T Consensus        65 td~~------~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~  124 (321)
T PTZ00325         65 ADGE------LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIV  124 (321)
T ss_pred             cCCC------chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe
Confidence            4433      356778899999999998654 3567889999999999999999998 677877653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.88  E-value=2.5e-08  Score=71.68  Aligned_cols=106  Identities=21%  Similarity=0.271  Sum_probs=74.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++||||||++|++++++|++.|+   .|.+.+|++...      ..+                ...+.+..+|+.++.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~---~v~~~~r~~~~~------~~~----------------~~~v~~~~~d~~~~~   55 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGH---EVRAAVRNPEAA------AAL----------------AGGVEVVLGDLRDPK   55 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCC---EEEEEEeCHHHH------Hhh----------------cCCcEEEEeccCCHh
Confidence            4799999999999999999999986   778888875421      110                156888899999866


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            .+...+++.+.++++.+... ...  ...........+..+.+. . ..++++++|
T Consensus        56 ------~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s  106 (275)
T COG0702          56 ------SLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG-A-GVKHGVSLS  106 (275)
T ss_pred             ------HHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc-C-CceEEEEec
Confidence                  58888999999999887654 333  234444555555555554 2 345555543

>KOG1478|consensus

Probab=98.87  E-value=2e-08  Score=70.93  Aligned_cols=132  Identities=14%  Similarity=0.177  Sum_probs=82.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCC-CCc-EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCP-DIG-KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~-~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      -|.++|||+++++|.+|+.+|++... +++ .+++.+|+-+  .+++.+..+...         .+...-++.++..|++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~--kae~vc~~lk~f---------~p~~~i~~~yvlvD~s   71 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMS--KAEAVCAALKAF---------HPKSTIEVTYVLVDVS   71 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChh--HHHHHHHHHHHh---------CCCceeEEEEEEEehh
Confidence            46899999999999999999988633 232 2333344332  444444444332         1222357889999998


Q ss_pred             CCCCCCC-hhHHHHHhccccEEEeccccccc----------------------------------hhhHHHHHHhhhHHH
Q psy11862         88 QANLGIK-DSDLLMLQEEVSVVFNGAASLKL----------------------------------EAELKENVAANTRGT  132 (152)
Q Consensus        88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~----------------------------------~~~~~~~~~~n~~~~  132 (152)
                      +-..-.+ -.++.+-+++.|.|+-|||....                                  .+.+..+++.|+.|.
T Consensus        72 Nm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGh  151 (341)
T KOG1478|consen   72 NMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGH  151 (341)
T ss_pred             hHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccch
Confidence            8431000 11334445578999999987531                                  345566789999999


Q ss_pred             HHHHHHHHhc---CCCcceEecC
Q psy11862        133 QRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus       133 ~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +.+++...+.   +.-..+|.+|
T Consensus       152 fyli~~l~pll~~~~~~~lvwtS  174 (341)
T KOG1478|consen  152 FYLIRELEPLLCHSDNPQLVWTS  174 (341)
T ss_pred             hhhHhhhhhHhhcCCCCeEEEEe
Confidence            9988877642   1223666665

>KOG1431|consensus

Probab=98.80  E-value=1.4e-08  Score=70.70  Aligned_cols=99  Identities=19%  Similarity=0.196  Sum_probs=73.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++|+|||++|.+|++|.+.+.++|.+-...+..+.                                    -.+|+++.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------------------------kd~DLt~~   44 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------------------------KDADLTNL   44 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------------------------ccccccch
Confidence            479999999999999999999998753223333221                                    14688775


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                      +      +.+++++  ++..|||+|+....    ....-++++.|+.---|++..|.+. ++++++++
T Consensus        45 a------~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsc  105 (315)
T KOG1431|consen   45 A------DTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSC  105 (315)
T ss_pred             H------HHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhh
Confidence            4      5777776  78999999987652    3444558899999999999999887 67666543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.79  E-value=3.7e-08  Score=69.91  Aligned_cols=117  Identities=17%  Similarity=0.157  Sum_probs=76.5

Q ss_pred             CCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCCC
Q psy11862         17 GGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIK   94 (152)
Q Consensus        17 G~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   94 (152)
                      |++  ++||++++++|+++|+   +|++.+|+..  +..+.+.++...              ....++.+|+++++.--.
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga---~V~~~~~~~~--~~~~~~~~l~~~--------------~~~~~~~~D~~~~~~v~~   61 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGA---NVILTDRNEE--KLADALEELAKE--------------YGAEVIQCDLSDEESVEA   61 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTE---EEEEEESSHH--HHHHHHHHHHHH--------------TTSEEEESCTTSHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCC---EEEEEeCChH--HHHHHHHHHHHH--------------cCCceEeecCcchHHHHH
Confidence            566  9999999999999995   7888888644  223334433221              112359999998651000


Q ss_pred             -hhHHHHHh-ccccEEEeccccccc-----------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         95 -DSDLLMLQ-EEVSVVFNGAASLKL-----------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        95 -~~~~~~~~-~~~d~vi~~a~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                       .+.+.+.+ .++|++||+++....           .+.+...+++|+.++..+++++.+. ..-.++|++|
T Consensus        62 ~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~is  133 (241)
T PF13561_consen   62 LFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINIS  133 (241)
T ss_dssp             HHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             HHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccccc
Confidence             11223335 678999999986542           3567778999999999999988652 1124566553

...

>PLN00106 malate dehydrogenase

Probab=98.73  E-value=2.4e-07  Score=68.58  Aligned_cols=114  Identities=14%  Similarity=0.026  Sum_probs=78.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      .+|.|+|++|.+|..++..|...+ -+..++++++.+ ......++...                ....  ...++.+..
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~-~~g~a~Dl~~~----------------~~~~--~i~~~~~~~   78 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIAN-TPGVAADVSHI----------------NTPA--QVRGFLGDD   78 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCC-CCeeEchhhhC----------------CcCc--eEEEEeCCC
Confidence            589999999999999999998764 335788888755 11101111110                0111  112322221


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                            ++...++++|+|||+||.... ..++.+.+..|+..+.++.+.+.+. +++.++++
T Consensus        79 ------d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aiviv  133 (323)
T PLN00106         79 ------QLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNI  133 (323)
T ss_pred             ------CHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence                  367788999999999998654 4678889999999999999999987 56666554

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.72  E-value=2.7e-07  Score=68.53  Aligned_cols=109  Identities=17%  Similarity=0.066  Sum_probs=70.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCC----CCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE-EEEcc
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCP----DIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH-IIEGD   85 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~----~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D   85 (152)
                      .+++|||++|++|.+++..|+..+.    .-..++++++.+....+.....++                 .+.. ....|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl-----------------~d~~~~~~~~   65 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMEL-----------------QDCAFPLLKS   65 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeeh-----------------hhccccccCC
Confidence            3699999999999999999988642    012788888854311010000000                 0000 11123


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      +....      ++.+.++++|+|||+||.... .++..++++.|+.-...+.....+.
T Consensus        66 ~~~~~------~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~  117 (325)
T cd01336          66 VVATT------DPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY  117 (325)
T ss_pred             ceecC------CHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            32222      466777899999999998654 3456779999999999998888776

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.70  E-value=1.4e-07  Score=64.20  Aligned_cols=99  Identities=14%  Similarity=0.169  Sum_probs=62.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|++| .+++.|++.|+   .|.+.+|++.      ....+..         ..+ ....+.++.+|+.|++
T Consensus         1 m~vlVtGGtG~gg-~la~~L~~~G~---~V~v~~R~~~------~~~~l~~---------~l~-~~~~i~~~~~Dv~d~~   60 (177)
T PRK08309          1 MHALVIGGTGMLK-RVSLWLCEKGF---HVSVIARREV------KLENVKR---------EST-TPESITPLPLDYHDDD   60 (177)
T ss_pred             CEEEEECcCHHHH-HHHHHHHHCcC---EEEEEECCHH------HHHHHHH---------Hhh-cCCcEEEEEccCCCHH
Confidence            4799999997665 59999999997   5666777532      1111110         000 0246788899999865


Q ss_pred             CCCChhHHHHHhc-------cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCc----ceEec
Q psy11862         91 LGIKDSDLLMLQE-------EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLV----VSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~v~~  151 (152)
                            ++.++++       ++|.+|+.               +++.++.++.++|++. +++    +|+++
T Consensus        61 ------sv~~~i~~~l~~~g~id~lv~~---------------vh~~~~~~~~~~~~~~-gv~~~~~~~~h~  110 (177)
T PRK08309         61 ------ALKLAIKSTIEKNGPFDLAVAW---------------IHSSAKDALSVVCREL-DGSSETYRLFHV  110 (177)
T ss_pred             ------HHHHHHHHHHHHcCCCeEEEEe---------------ccccchhhHHHHHHHH-ccCCCCceEEEE
Confidence                  4554443       45666643               3344667788888876 555    66653

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.65  E-value=5.3e-07  Score=60.88  Aligned_cols=103  Identities=15%  Similarity=0.188  Sum_probs=74.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|.|.|++|-+|+.|+++..++||   .|.+++|++....                       ..+.+..++.|+.++.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGH---eVTAivRn~~K~~-----------------------~~~~~~i~q~Difd~~   54 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGH---EVTAIVRNASKLA-----------------------ARQGVTILQKDIFDLT   54 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCC---eeEEEEeChHhcc-----------------------ccccceeecccccChh
Confidence            5889999999999999999999998   5688888765211                       1256778899999966


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                            .+.+.+.+.|+||..-+... +.+.    .........|++..+.. ++.|++.+
T Consensus        55 ------~~a~~l~g~DaVIsA~~~~~-~~~~----~~~~k~~~~li~~l~~a-gv~RllVV  103 (211)
T COG2910          55 ------SLASDLAGHDAVISAFGAGA-SDND----ELHSKSIEALIEALKGA-GVPRLLVV  103 (211)
T ss_pred             ------hhHhhhcCCceEEEeccCCC-CChh----HHHHHHHHHHHHHHhhc-CCeeEEEE
Confidence                  57788889999998766542 1111    11223356677777776 56677655

>PRK09620 hypothetical protein; Provisional

Probab=98.61  E-value=2.6e-07  Score=65.31  Aligned_cols=80  Identities=25%  Similarity=0.373  Sum_probs=51.7

Q ss_pred             cCCceEEEcCCc----------------chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862          8 YAGRSVLVTGGT----------------GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE   71 (152)
Q Consensus         8 ~~~~~ilItG~~----------------G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (152)
                      ++|++++||+|.                |++|++++++|+++|+   .|+++++......  ..+               
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga---~V~li~g~~~~~~--~~~---------------   60 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA---HVIYLHGYFAEKP--NDI---------------   60 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC---eEEEEeCCCcCCC--ccc---------------
Confidence            468999999886                9999999999999997   5565554321100  000               


Q ss_pred             ccccCCcEEEEEc--ccCCCCCCCChhHHHHHhc--cccEEEeccccccc
Q psy11862         72 CPAQLSRLHIIEG--DILQANLGIKDSDLLMLQE--EVSVVFNGAASLKL  117 (152)
Q Consensus        72 ~~~~~~~~~~~~~--D~~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~  117 (152)
                       + ....+..+.+  |+.+        .+.+.+.  ++|+|||+||..++
T Consensus        61 -~-~~~~~~~V~s~~d~~~--------~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         61 -N-NQLELHPFEGIIDLQD--------KMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             -C-CceeEEEEecHHHHHH--------HHHHHhcccCCCEEEECccccce
Confidence             0 0112333444  3322        4666664  68999999998775

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.56  E-value=5.3e-07  Score=63.82  Aligned_cols=75  Identities=23%  Similarity=0.244  Sum_probs=46.6

Q ss_pred             EEc-CCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         14 LVT-GGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        14 lIt-G~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      .|| .++|++|.+++++|+++|+   .|+++.|.....                      +.....+.++.++..+..  
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~---~V~li~r~~~~~----------------------~~~~~~v~~i~v~s~~~m--   71 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGH---EVTLVTTKTAVK----------------------PEPHPNLSIIEIENVDDL--   71 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCC---EEEEEECccccc----------------------CCCCCCeEEEEEecHHHH--
Confidence            344 3688899999999999997   667776643210                      000134555554332210  


Q ss_pred             CChhHHHHHhccccEEEeccccccc
Q psy11862         93 IKDSDLLMLQEEVSVVFNGAASLKL  117 (152)
Q Consensus        93 ~~~~~~~~~~~~~d~vi~~a~~~~~  117 (152)
                        .+.+.+.++++|++||+||..++
T Consensus        72 --~~~l~~~~~~~DivIh~AAvsd~   94 (229)
T PRK06732         72 --LETLEPLVKDHDVLIHSMAVSDY   94 (229)
T ss_pred             --HHHHHHHhcCCCEEEeCCccCCc
Confidence              12355566789999999998763

>KOG1203|consensus

Probab=98.52  E-value=4.6e-07  Score=68.52  Aligned_cols=122  Identities=25%  Similarity=0.274  Sum_probs=75.4

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ...+.++|+|+||+|.+|+-+++.|+++|+   .|.++.|+....  .+.+. .             .........+..+
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf---~vra~VRd~~~a--~~~~~-~-------------~~~d~~~~~v~~~  135 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGF---SVRALVRDEQKA--EDLLG-V-------------FFVDLGLQNVEAD  135 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCC---eeeeeccChhhh--hhhhc-c-------------cccccccceeeec
Confidence            345678999999999999999999999997   668888864421  11111 0             0001222233333


Q ss_pred             cCCCCCCCChhHHHHHhc----cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQE----EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .....     +.+..+.+    ...+++-+++.....++...-+.+...++.+++++|+.+ +++|++++|
T Consensus       136 ~~~~~-----d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~  200 (411)
T KOG1203|consen  136 VVTAI-----DILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVG  200 (411)
T ss_pred             ccccc-----chhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEE
Confidence            32221     12333333    234666666543322223334578899999999999988 899999875

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.45  E-value=5.2e-07  Score=64.15  Aligned_cols=91  Identities=15%  Similarity=0.091  Sum_probs=65.4

Q ss_pred             HHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCCChhHHHHHhc--
Q psy11862         26 LLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQE--  103 (152)
Q Consensus        26 l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--  103 (152)
                      +++.|+++|+   +|++++|+....                          ....++.+|+++.+      ++.++++  
T Consensus         1 ~a~~l~~~G~---~Vv~~~r~~~~~--------------------------~~~~~~~~Dl~~~~------~v~~~~~~~   45 (241)
T PRK12428          1 TARLLRFLGA---RVIGVDRREPGM--------------------------TLDGFIQADLGDPA------SIDAAVAAL   45 (241)
T ss_pred             ChHHHHhCCC---EEEEEeCCcchh--------------------------hhhHhhcccCCCHH------HHHHHHHHh
Confidence            4678889886   678888864311                          01124578998854      4555554  


Q ss_pred             --cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862        104 --EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus       104 --~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                        ++|++||+||... ..++...+++|+.++..+++++.+. ...+++|++|
T Consensus        46 ~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~is   96 (241)
T PRK12428         46 PGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVA   96 (241)
T ss_pred             cCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeC
Confidence              6899999999753 4568889999999999999998763 1235888876

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.45  E-value=1.3e-06  Score=65.79  Aligned_cols=91  Identities=20%  Similarity=0.162  Sum_probs=55.3

Q ss_pred             CCceEEEcCCcchhHHH--HHHHHHhhCCCCcEEEEeecCCCCCC---------HHHHHHHHhcChhhhhhhhhccccCC
Q psy11862          9 AGRSVLVTGGTGFMGKV--LLEKLLRSCPDIGKVYILCRAKRGLT---------PKARLAEFSKLPVFERLRKECPAQLS   77 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~--l~~~l~~~g~~~~~v~~~~r~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (152)
                      .+|+++|||+++++|.+  ++++| ..|.   .++++++......         ..+.+.+..            ...+.
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA---~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a------------~~~G~  103 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGA---DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFA------------KAAGL  103 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCC---eEEEEecCcchhhhcccccccchHHHHHHHH------------HhcCC
Confidence            45899999999999999  89999 8885   5566664321110         011122111            11124


Q ss_pred             cEEEEEcccCCCCCCCC-hhHHHHHhccccEEEeccccc
Q psy11862         78 RLHIIEGDILQANLGIK-DSDLLMLQEEVSVVFNGAASL  115 (152)
Q Consensus        78 ~~~~~~~D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~  115 (152)
                      .+..+.+|+++++.--. .+.+.+.+.++|++||++|..
T Consensus       104 ~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        104 YAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            56788999998652000 112233334789999999976

>cd00704 MDH Malate dehydrogenase

Probab=98.45  E-value=4.6e-06  Score=61.97  Aligned_cols=112  Identities=18%  Similarity=0.103  Sum_probs=73.3

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +|.|+|++|.+|..++..|...+. +.     .++++++.+..                           ........|+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~-~~~~~~~~l~L~Di~~~~---------------------------~~~~g~~~Dl   53 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGEL-FGDDQPVILHLLDIPPAM---------------------------KALEGVVMEL   53 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCc-cCCCCceEEEEEecCCcc---------------------------Cccceeeeeh
Confidence            689999999999999999887643 22     37888875421                           0111223333


Q ss_pred             CCCCCCCC-----hhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEec
Q psy11862         87 LQANLGIK-----DSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMK-KLVVSLDI  151 (152)
Q Consensus        87 ~~~~~~~~-----~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~  151 (152)
                      .+......     ..+..+.++++|+|||+||.... .++..+.+..|+.-...+.....+.. .-..++.+
T Consensus        54 ~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivv  125 (323)
T cd00704          54 QDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVV  125 (323)
T ss_pred             hhhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEe
Confidence            33210000     01356777899999999998654 45677789999999999998888762 22344444

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.42  E-value=6.3e-06  Score=60.98  Aligned_cols=115  Identities=17%  Similarity=0.138  Sum_probs=72.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++|.|++|.+|.+++..|.........+.+++|++...  ...++ +         ..     ......+.+ . +. 
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~--g~alD-l---------~~-----~~~~~~i~~-~-~~-   60 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTP--GVAVD-L---------SH-----IPTAVKIKG-F-SG-   60 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCc--ceehh-h---------hc-----CCCCceEEE-e-CC-
Confidence            5899999999999999998855311234667777753211  00000 0         00     010111222 1 11 


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                           +++.+.++++|+||.++|.... ..+..+.+..|......+++...+. +++++|.+
T Consensus        61 -----~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~iviv  116 (312)
T PRK05086         61 -----EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGI  116 (312)
T ss_pred             -----CCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence                 1355666889999999998653 3456678999999999999999987 56665543

>KOG1372|consensus

Probab=98.36  E-value=1.7e-06  Score=61.29  Aligned_cols=116  Identities=25%  Similarity=0.288  Sum_probs=82.0

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ..+.+||||-+|--|++++.-|+..||   .|+.+.|+.+.-+ ..++..+....        ..........+.+|++|
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgY---eVHGiiRRsSsFN-T~RIeHlY~nP--------~~h~~~~mkLHYgDmTD   94 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGY---EVHGIIRRSSSFN-TARIEHLYSNP--------HTHNGASMKLHYGDMTD   94 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCc---eeeEEEeeccccc-hhhhhhhhcCc--------hhcccceeEEeeccccc
Confidence            446899999999999999999999998   6677777655321 23444333221        11234677889999999


Q ss_pred             CCCCCChhHHHHHhc--cccEEEeccccccchh--h-HHHHHHhhhHHHHHHHHHHHhc
Q psy11862         89 ANLGIKDSDLLMLQE--EVSVVFNGAASLKLEA--E-LKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~~~--~-~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      ..      .+.+++.  .++-|+|+|+.++..-  + .+..-++...|+.+|+++.+.+
T Consensus        95 ss------~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c  147 (376)
T KOG1372|consen   95 SS------CLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRAC  147 (376)
T ss_pred             hH------HHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhc
Confidence            76      3677766  6799999999877421  1 2225567778899999988765

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.36  E-value=1.6e-06  Score=66.08  Aligned_cols=79  Identities=22%  Similarity=0.217  Sum_probs=52.9

Q ss_pred             cCCceEEEcCC----------------cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862          8 YAGRSVLVTGG----------------TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE   71 (152)
Q Consensus         8 ~~~~~ilItG~----------------~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (152)
                      +++++++||||                +|.+|.+++++|.++|+   .|++++++....                     
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga---~V~~v~~~~~~~---------------------  241 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA---DVTLVSGPVNLP---------------------  241 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC---EEEEeCCCcccc---------------------
Confidence            68999999999                78899999999999996   667777643210                     


Q ss_pred             ccccCCcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccccccc
Q psy11862         72 CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL  117 (152)
Q Consensus        72 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~  117 (152)
                         .+..  +...|+++.+-  -.+.+.+.++++|++||+||..++
T Consensus       242 ---~~~~--~~~~dv~~~~~--~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        242 ---TPAG--VKRIDVESAQE--MLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             ---CCCC--cEEEccCCHHH--HHHHHHHhcCCCCEEEEccccccc
Confidence               0111  23457766330  011223334578999999998763

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.32  E-value=1.4e-05  Score=55.95  Aligned_cols=116  Identities=10%  Similarity=0.070  Sum_probs=71.6

Q ss_pred             ccCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .++||+++|+|-  ...|++.|++.|.++|.   ++...-.   .+.+..++.++.+.             .....+++|
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GA---eL~fTy~---~e~l~krv~~la~~-------------~~s~~v~~c   63 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGA---ELAFTYQ---GERLEKRVEELAEE-------------LGSDLVLPC   63 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCC---EEEEEec---cHHHHHHHHHHHhh-------------ccCCeEEec
Confidence            378999999994  56799999999999996   4433222   22455555554321             123557899


Q ss_pred             ccCCCCC-CCChhHHHHHhccccEEEeccccccc-----------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         85 DILQANL-GIKDSDLLMLQEEVSVVFNGAASLKL-----------EAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        85 D~~~~~~-~~~~~~~~~~~~~~d~vi~~a~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      |+++.+. ....+++.+...++|.++|+-|+...           .+.+...+++..-+...+.+++++
T Consensus        64 DV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~  132 (259)
T COG0623          64 DVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARP  132 (259)
T ss_pred             CCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHH
Confidence            9998651 00012233333478999999997652           233333455555556666666654

>KOG1204|consensus

Probab=98.32  E-value=1.1e-06  Score=61.25  Aligned_cols=122  Identities=19%  Similarity=0.145  Sum_probs=69.3

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .++.+++||++.+||..++..+...+.++ .++...|.....      ..            ..-..........+|++.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~-~r~g~~r~~a~~------~~------------L~v~~gd~~v~~~g~~~e   65 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEA-LRYGVARLLAEL------EG------------LKVAYGDDFVHVVGDITE   65 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHH-HHHhhhcccccc------cc------------eEEEecCCcceechHHHH
Confidence            35789999999999988888887775432 223222322110      00            000001222233344433


Q ss_pred             CCCCCChhHHHHHhc----cccEEEeccccccc----------hhhHHHHHHhhhHHHHHHHHHHHhc-C-C--CcceEe
Q psy11862         89 ANLGIKDSDLLMLQE----EVSVVFNGAASLKL----------EAELKENVAANTRGTQRLLDIALKM-K-K--LVVSLD  150 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~----~~d~vi~~a~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~-~-~--~~~~v~  150 (152)
                      ...   .+++.++.+    ..|.||||||....          ...|+..++.|+.+...|...+.+. . .  .+-+|+
T Consensus        66 ~~~---l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVn  142 (253)
T KOG1204|consen   66 EQL---LGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVN  142 (253)
T ss_pred             HHH---HHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEE
Confidence            221   122222222    56999999997542          4667889999999998887776542 1 1  255677


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       143 vS  144 (253)
T KOG1204|consen  143 VS  144 (253)
T ss_pred             ec
Confidence            65

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.30  E-value=1.8e-05  Score=58.89  Aligned_cols=112  Identities=19%  Similarity=0.145  Sum_probs=73.1

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +|.|+|++|.+|..++..|...+. +.     .++++++.+...                           ....+..|+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~~~~---------------------------~a~g~~~Dl   52 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPPAMK---------------------------VLEGVVMEL   52 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCCccc---------------------------ccceeEeeh
Confidence            478999999999999999987543 11     478888754311                           112223333


Q ss_pred             CCCCCCCC-----hhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEec
Q psy11862         87 LQANLGIK-----DSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMK-KLVVSLDI  151 (152)
Q Consensus        87 ~~~~~~~~-----~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~  151 (152)
                      .+......     ..+....+.++|+||++||.... .++..+.+..|+.-...+.....+.. .-..++.+
T Consensus        53 ~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivv  124 (324)
T TIGR01758        53 MDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVV  124 (324)
T ss_pred             hcccchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEe
Confidence            33221000     00235667899999999998654 34578899999999999999988862 22344444

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.28  E-value=3.1e-06  Score=63.01  Aligned_cols=39  Identities=21%  Similarity=0.304  Sum_probs=32.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+++++++||||+|++|+.++++|... .++..++++.|+
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~-~gv~~lilv~R~  190 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAK-TGVAELLLVARQ  190 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhh-CCCCEEEEEcCC
Confidence            467899999999999999999999865 234688888875

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.25  E-value=6.5e-06  Score=60.31  Aligned_cols=85  Identities=9%  Similarity=0.077  Sum_probs=54.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++|+|+ |++|++++..|.+.|.  .+|+++.|+... ....+..+++..             ....+.....|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a~~l~~~l~~-------------~~~~~~~~~~d~  187 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTAEKIKQ-------------EVPECIVNVYDL  187 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHHHHHHHHHhh-------------cCCCceeEEech
Confidence            46789999998 7999999999999876  568888886421 111221112111             012344455677


Q ss_pred             CCCCCCCChhHHHHHhccccEEEecccc
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAAS  114 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~  114 (152)
                      .+.+      ++...+...|++||+-..
T Consensus       188 ~~~~------~~~~~~~~~DilINaTp~  209 (289)
T PRK12548        188 NDTE------KLKAEIASSDILVNATLV  209 (289)
T ss_pred             hhhh------HHHhhhccCCEEEEeCCC
Confidence            6533      466667788999998743

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.24  E-value=5.7e-06  Score=57.03  Aligned_cols=82  Identities=22%  Similarity=0.249  Sum_probs=53.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|+||+|++|+.+++.|.+.|+   +|.+++|+..      +.+.+..     .+..     ........+|..
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~---~V~l~~R~~~------~~~~l~~-----~l~~-----~~~~~~~~~~~~   86 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGA---RVVLVGRDLE------RAQKAAD-----SLRA-----RFGEGVGAVETS   86 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCHH------HHHHHHH-----HHHh-----hcCCcEEEeeCC
Confidence            5778999999999999999999999874   6777777532      2222111     0000     012233445655


Q ss_pred             CCCCCCChhHHHHHhccccEEEecccc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAAS  114 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~  114 (152)
                      +.      +++...+.++|+||++...
T Consensus        87 ~~------~~~~~~~~~~diVi~at~~  107 (194)
T cd01078          87 DD------AARAAAIKGADVVFAAGAA  107 (194)
T ss_pred             CH------HHHHHHHhcCCEEEECCCC
Confidence            53      3567777889999887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.22  E-value=1.4e-05  Score=60.40  Aligned_cols=79  Identities=27%  Similarity=0.396  Sum_probs=60.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++|.|+ |++|+.++..|++.|.  ..|++.+|+..      .+.++...            ...+++....|+.+.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~------~~~~i~~~------------~~~~v~~~~vD~~d~   59 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKE------KCARIAEL------------IGGKVEALQVDAADV   59 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHH------HHHHHHhh------------ccccceeEEecccCh
Confidence            478999998 9999999999999863  58899998743      22222111            124788999999986


Q ss_pred             CCCCChhHHHHHhccccEEEeccccc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASL  115 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~  115 (152)
                      .      .+.+++++.|+|||++...
T Consensus        60 ~------al~~li~~~d~VIn~~p~~   79 (389)
T COG1748          60 D------ALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             H------HHHHHHhcCCEEEEeCCch
Confidence            5      6888999899999998654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.14  E-value=2.4e-05  Score=59.45  Aligned_cols=78  Identities=22%  Similarity=0.296  Sum_probs=54.0

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      |+|.|+ |++|+.+++.|++.+ ...+|.+.+|+..      +++.+...           ....++..+..|+.|.+  
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~------~~~~~~~~-----------~~~~~~~~~~~d~~~~~--   59 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPE------KAERLAEK-----------LLGDRVEAVQVDVNDPE--   59 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHH------HHHHHHT-------------TTTTEEEEE--TTTHH--
T ss_pred             CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHH------HHHHHHhh-----------ccccceeEEEEecCCHH--
Confidence            689999 999999999999985 3337888888632      33322210           02478999999998854  


Q ss_pred             CChhHHHHHhccccEEEeccccc
Q psy11862         93 IKDSDLLMLQEEVSVVFNGAASL  115 (152)
Q Consensus        93 ~~~~~~~~~~~~~d~vi~~a~~~  115 (152)
                          ++.+++++.|+|||+++..
T Consensus        60 ----~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen   60 ----SLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             ----HHHHHHTTSSEEEE-SSGG
T ss_pred             ----HHHHHHhcCCEEEECCccc
Confidence                6899999999999999865

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.09  E-value=0.00042  Score=45.45  Aligned_cols=116  Identities=14%  Similarity=0.154  Sum_probs=73.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++|.|+|++|.+|++++..|...+. +.+++++++.+.  .+.-...+         +................+     
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l-~~ei~L~D~~~~--~~~g~a~D---------l~~~~~~~~~~~~i~~~~-----   63 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGL-ADEIVLIDINED--KAEGEALD---------LSHASAPLPSPVRITSGD-----   63 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTT-SSEEEEEESSHH--HHHHHHHH---------HHHHHHGSTEEEEEEESS-----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-CCceEEeccCcc--cceeeehh---------hhhhhhhccccccccccc-----
Confidence            5899999999999999999988853 467999987532  11111111         111111111222222222     


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                              .+.++++|+||-++|.... .++..++++.|..-...+.+...+...-..++.+
T Consensus        64 --------~~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivv  117 (141)
T PF00056_consen   64 --------YEALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVV  117 (141)
T ss_dssp             --------GGGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-
T ss_pred             --------ccccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEe
Confidence                    2244689999999997543 4567778899999999999998886322344443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.06  E-value=6e-06  Score=58.40  Aligned_cols=29  Identities=28%  Similarity=0.513  Sum_probs=22.5

Q ss_pred             EEcC-CcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         14 LVTG-GTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        14 lItG-~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .||. ++|++|.+++++|+++|+   .|+++++
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga---~Vvlv~~   47 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGH---EVTLVTT   47 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCC---EEEEEcC
Confidence            3444 589999999999999997   5555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG2774|consensus

Probab=97.93  E-value=8.3e-06  Score=57.45  Aligned_cols=109  Identities=25%  Similarity=0.212  Sum_probs=72.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      -.+++|||+-|-+|..++..|..+ ++-..|++.+-.+.+.+.                       ...-.++..|+.|.
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~-yGs~~VILSDI~KPp~~V-----------------------~~~GPyIy~DILD~   99 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYM-YGSECVILSDIVKPPANV-----------------------TDVGPYIYLDILDQ   99 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHH-hCCccEehhhccCCchhh-----------------------cccCCchhhhhhcc
Confidence            468999999999999999988776 332344443322221111                       11123556788775


Q ss_pred             CCCCChhHHHHHh--ccccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceE
Q psy11862         90 NLGIKDSDLLMLQ--EEVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSL  149 (152)
Q Consensus        90 ~~~~~~~~~~~~~--~~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v  149 (152)
                      .      .+++.+  .++|-+||..+..+.  +.+..-...+|+.|..|+++.+++. +.+-||
T Consensus       100 K------~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iFV  156 (366)
T KOG2774|consen  100 K------SLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVFV  156 (366)
T ss_pred             c------cHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEee
Confidence            4      366554  378999999876542  3334446789999999999999987 554443

>KOG4288|consensus

Probab=97.86  E-value=3.6e-05  Score=54.00  Aligned_cols=109  Identities=17%  Similarity=0.129  Sum_probs=78.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ...++.|+.|+.|.++++.-...++   .|..+.|+....    .+                ..+...+.++.+|.....
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~---svgilsen~~k~----~l----------------~sw~~~vswh~gnsfssn  109 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVH---SVGILSENENKQ----TL----------------SSWPTYVSWHRGNSFSSN  109 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhce---eeeEeecccCcc----hh----------------hCCCcccchhhccccccC
Confidence            4678889999999999999999886   566777765411    11                123467888888876654


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .      +.....++..++.+++...   +...+.++|=+.-.+..+++++. ++++|+|+|
T Consensus       110 ~------~k~~l~g~t~v~e~~ggfg---n~~~m~~ing~ani~a~kaa~~~-gv~~fvyIS  161 (283)
T KOG4288|consen  110 P------NKLKLSGPTFVYEMMGGFG---NIILMDRINGTANINAVKAAAKA-GVPRFVYIS  161 (283)
T ss_pred             c------chhhhcCCcccHHHhcCcc---chHHHHHhccHhhHHHHHHHHHc-CCceEEEEE
Confidence            2      4555567788887776442   34446677777777888889887 899999987

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.83  E-value=0.00048  Score=51.28  Aligned_cols=118  Identities=18%  Similarity=0.067  Sum_probs=72.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ++|.|+|++|.+|..++..|+..+. +.     .+++++..+....+.-..-+         +..........+.     
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~D---------l~~~~~~~~~~~~-----   67 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQALKALEGVAME---------LEDCAFPLLAEIV-----   67 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCCcccccceeehh---------hhhccccccCceE-----
Confidence            5899999999999999999987643 34     68888875432111000000         0000000001111     


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCC-CcceEec
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKK-LVVSLDI  151 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~  151 (152)
                      +..        +....++++|+||.+||.... .++..+.+..|+.-...+.....+... -..++.+
T Consensus        68 i~~--------~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivv  127 (322)
T cd01338          68 ITD--------DPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVV  127 (322)
T ss_pred             Eec--------CcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEe
Confidence            111        134556899999999997653 346677899999999999999887632 2344444

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.82  E-value=7.3e-05  Score=56.92  Aligned_cols=75  Identities=21%  Similarity=0.305  Sum_probs=50.9

Q ss_pred             cCCceEEEcCCc----------------chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862          8 YAGRSVLVTGGT----------------GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE   71 (152)
Q Consensus         8 ~~~~~ilItG~~----------------G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (152)
                      +++++++||||.                |.+|.++++++..+|+   .|+++.+.....                     
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga---~V~~~~g~~~~~---------------------  238 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGA---DVTLITGPVSLL---------------------  238 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCC---EEEEeCCCCccC---------------------
Confidence            788999999993                4599999999999996   666666543210                     


Q ss_pred             ccccCCcEEEEEcccCCCCCCCChhHH-H----HHhccccEEEeccccccc
Q psy11862         72 CPAQLSRLHIIEGDILQANLGIKDSDL-L----MLQEEVSVVFNGAASLKL  117 (152)
Q Consensus        72 ~~~~~~~~~~~~~D~~~~~~~~~~~~~-~----~~~~~~d~vi~~a~~~~~  117 (152)
                         .+..+  ...|+.+.+      ++ .    ....+.|++|++||..++
T Consensus       239 ---~~~~~--~~~~v~~~~------~~~~~~~~~~~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       239 ---TPPGV--KSIKVSTAE------EMLEAALNELAKDFDIFISAAAVADF  278 (390)
T ss_pred             ---CCCCc--EEEEeccHH------HHHHHHHHhhcccCCEEEEccccccc
Confidence               01222  345666543      33 2    233468999999998764

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.82  E-value=0.00012  Score=50.24  Aligned_cols=79  Identities=20%  Similarity=0.258  Sum_probs=46.1

Q ss_pred             cCCceEEEcCC----------------cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862          8 YAGRSVLVTGG----------------TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE   71 (152)
Q Consensus         8 ~~~~~ilItG~----------------~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (152)
                      ++|++|+||+|                +|-.|.++++++..+|+   .|.++.......                     
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga---~V~li~g~~~~~---------------------   56 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGA---EVTLIHGPSSLP---------------------   56 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT----EEEEEE-TTS-----------------------
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCC---EEEEEecCcccc---------------------
Confidence            36788888876                57799999999999997   555555432100                     


Q ss_pred             ccccCCcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccccccc
Q psy11862         72 CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL  117 (152)
Q Consensus        72 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~  117 (152)
                         .+..+..+...-.++-    .+.+...++..|++||+|+..++
T Consensus        57 ---~p~~~~~i~v~sa~em----~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   57 ---PPPGVKVIRVESAEEM----LEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             -----TTEEEEE-SSHHHH----HHHHHHHGGGGSEEEE-SB--SE
T ss_pred             ---ccccceEEEecchhhh----hhhhccccCcceeEEEecchhhe
Confidence               0246666665533321    22455556678999999999875

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.82  E-value=7.4e-05  Score=48.61  Aligned_cols=81  Identities=20%  Similarity=0.165  Sum_probs=52.7

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      ...+++++++|.|+ |+.|+.++..|...|.  ..|+++.|+..      +.+.+...         .  ....+.++..
T Consensus         7 ~~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~~------ra~~l~~~---------~--~~~~~~~~~~   66 (135)
T PF01488_consen    7 FGDLKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTPE------RAEALAEE---------F--GGVNIEAIPL   66 (135)
T ss_dssp             HSTGTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSHH------HHHHHHHH---------H--TGCSEEEEEG
T ss_pred             cCCcCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCHH------HHHHHHHH---------c--CccccceeeH
Confidence            34578999999996 8899999999999865  67999998632      22222110         0  0133444433


Q ss_pred             ccCCCCCCCChhHHHHHhccccEEEecccccc
Q psy11862         85 DILQANLGIKDSDLLMLQEEVSVVFNGAASLK  116 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~  116 (152)
                        .+         +.......|+||++.+...
T Consensus        67 --~~---------~~~~~~~~DivI~aT~~~~   87 (135)
T PF01488_consen   67 --ED---------LEEALQEADIVINATPSGM   87 (135)
T ss_dssp             --GG---------HCHHHHTESEEEE-SSTTS
T ss_pred             --HH---------HHHHHhhCCeEEEecCCCC
Confidence              22         4556678999999876543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.80  E-value=0.0003  Score=52.05  Aligned_cols=110  Identities=15%  Similarity=0.056  Sum_probs=67.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|.|+|++|.+|..++..|+..|.. ..|++++|......+.....++         ............   ...+.  
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~-~~v~lvd~~~~~~~l~~~~~dl---------~d~~~~~~~~~~---i~~~~--   65 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVV-KEINLISRPKSLEKLKGLRLDI---------YDALAAAGIDAE---IKISS--   65 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEECcccccccccccchh---------hhchhccCCCcE---EEECC--
Confidence            58999999999999999999998752 3688888843211111100000         000000000111   11111  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccch-hhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLE-AELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                            +.. .+.++|++|-++|....+ .+..+.+..|+.....+.+...+.
T Consensus        66 ------d~~-~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~  111 (309)
T cd05294          66 ------DLS-DVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF  111 (309)
T ss_pred             ------CHH-HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                  223 378999999999976543 355668888999999988887765

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.75  E-value=0.00046  Score=51.40  Aligned_cols=110  Identities=16%  Similarity=0.051  Sum_probs=69.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .+|.|+|++|.+|..++..|...+. +.     .+++++..+....+.-...++         ..........+.     
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl---------~~~~~~~~~~~~-----   68 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPPAMKALEGVAMEL---------EDCAFPLLAGVV-----   68 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCCcccccchHHHHH---------hhccccccCCcE-----
Confidence            3799999999999999999988753 34     688888754211111111111         100000001111     


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcC
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMK  143 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~  143 (152)
                      +..        +....++++|+||.+||.... .++..+.+..|+.-...+.....+..
T Consensus        69 i~~--------~~~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~  119 (323)
T TIGR01759        69 ATT--------DPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVA  119 (323)
T ss_pred             Eec--------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            111        134556889999999997643 45677799999999999999888863

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>KOG1494|consensus

Probab=97.75  E-value=0.00052  Score=49.62  Aligned_cols=108  Identities=18%  Similarity=0.079  Sum_probs=72.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ..+.++.|.|+.|+||+.+..-|- ..+.+..+.+++-...+. ..                       .++.  ..|-.
T Consensus        26 ~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~G-Va-----------------------aDlS--HI~T~   78 (345)
T KOG1494|consen   26 QRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPG-VA-----------------------ADLS--HINTN   78 (345)
T ss_pred             cCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCc-cc-----------------------cccc--ccCCC
Confidence            356799999999999999766554 557777776666433211 00                       0111  11111


Q ss_pred             CCCCCCC-hhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         88 QANLGIK-DSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      ..-.+.. +++++..+++.|+|+--||.... ....++++++|..-...|..+..+.
T Consensus        79 s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~  135 (345)
T KOG1494|consen   79 SSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC  135 (345)
T ss_pred             CceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh
Confidence            1101111 34799999999999999997653 5667779999999999999888875

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.72  E-value=0.00034  Score=50.39  Aligned_cols=34  Identities=18%  Similarity=0.296  Sum_probs=28.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      |+|+|+||||. |+.+++.|.+.|+   .|+..+++..
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~---~v~~s~~t~~   34 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGI---EILVTVTTSE   34 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCC---eEEEEEccCC
Confidence            57999999999 9999999999986   6677777654

This enzyme was found to be a monomer by gel filtration.

>KOG2733|consensus

Probab=97.72  E-value=8.9e-05  Score=55.10  Aligned_cols=85  Identities=19%  Similarity=0.303  Sum_probs=60.6

Q ss_pred             eEEEcCCcchhHHHHHHHHHh----hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLR----SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~----~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      -++|.||+||.|..+++++.+    .+.   .+-+..|++.  .+.+.+....++         .....+...++.+|..
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~---slavAGRn~~--KL~~vL~~~~~k---------~~~~ls~~~i~i~D~~   72 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGL---SLAVAGRNEK--KLQEVLEKVGEK---------TGTDLSSSVILIADSA   72 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCc---eEEEecCCHH--HHHHHHHHHhhc---------cCCCcccceEEEecCC
Confidence            478999999999999999988    333   5566677644  445555544332         1111233338889998


Q ss_pred             CCCCCCChhHHHHHhccccEEEecccccc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLK  116 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~  116 (152)
                      |+.      ++.+..+.+.+|+||+|+..
T Consensus        73 n~~------Sl~emak~~~vivN~vGPyR   95 (423)
T KOG2733|consen   73 NEA------SLDEMAKQARVIVNCVGPYR   95 (423)
T ss_pred             CHH------HHHHHHhhhEEEEeccccce
Confidence            865      79999999999999999765

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.69  E-value=0.00037  Score=54.00  Aligned_cols=77  Identities=22%  Similarity=0.252  Sum_probs=51.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|+|+++ +|.++++.|++.|+   .|.+.+++.. ....+.+.++..               .++.++.+|..
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~---~V~~~d~~~~-~~~~~~~~~l~~---------------~~~~~~~~~~~   62 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGA---KVILTDEKEE-DQLKEALEELGE---------------LGIELVLGEYP   62 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCC---EEEEEeCCch-HHHHHHHHHHHh---------------cCCEEEeCCcc
Confidence            5789999999887 99999999999997   5666666432 112222222211               23556666665


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASL  115 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~  115 (152)
                      +           ....++|+||+++|..
T Consensus        63 ~-----------~~~~~~d~vv~~~g~~   79 (450)
T PRK14106         63 E-----------EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             h-----------hHhhcCCEEEECCCCC
Confidence            4           1235789999999864

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.66  E-value=0.00026  Score=45.14  Aligned_cols=35  Identities=31%  Similarity=0.616  Sum_probs=29.8

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +|.|.|++|++|..+++.|.++ +.+..+.+++++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence            5889999999999999999996 6776677777766

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.66  E-value=0.0021  Score=47.58  Aligned_cols=106  Identities=15%  Similarity=0.023  Sum_probs=69.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++|.|+|++|.+|..++..|+..+. +..+++++.. ...-...++...            .    ......... .+. 
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~-~~elvLiDi~-~a~g~alDL~~~------------~----~~~~i~~~~-~~~-   60 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPL-VSELALYDIV-NTPGVAADLSHI------------N----TPAKVTGYL-GPE-   60 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEecC-ccceeehHhHhC------------C----CcceEEEec-CCC-
Confidence            4789999999999999999987753 4578888875 211101111110            0    111111110 111 


Q ss_pred             CCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                            ++.+.++++|+||-+||... ..++..++++.|..-...+.+...+.
T Consensus        61 ------~~y~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~  107 (310)
T cd01337          61 ------ELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA  107 (310)
T ss_pred             ------chHHhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                  25566789999999999754 34567778999999999999888876

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.65  E-value=0.0012  Score=49.24  Aligned_cols=117  Identities=21%  Similarity=0.105  Sum_probs=72.7

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEeecCCCCCCH---HHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYILCRAKRGLTP---KARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      +.++|.|+|++|.+|..++..|+..+. +.     .+++++..+....+   ..++.....           +. ...+.
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~-----------~~-~~~~~   69 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVMELDDCAF-----------PL-LAGVV   69 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeehhhhhhhh-----------hh-cCCcE
Confidence            346899999999999999999887643 23     68888875431101   111111100           00 01111


Q ss_pred             EEEcccCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCC-CcceEec
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKK-LVVSLDI  151 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~  151 (152)
                           ++.        +..+.++++|+||-+||.... .++..+.+..|+.-...+.+...+... -..++.+
T Consensus        70 -----i~~--------~~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivv  129 (326)
T PRK05442         70 -----ITD--------DPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVV  129 (326)
T ss_pred             -----Eec--------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence                 111        134556789999999997543 456777899999999999988888432 3345544

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.49  E-value=0.0004  Score=51.96  Aligned_cols=39  Identities=31%  Similarity=0.457  Sum_probs=33.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +++|+|.||+|++|.++++.|.++++.+..+..+.+...
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~   39 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS   39 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence            468999999999999999999998877777777876543

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.47  E-value=0.0013  Score=49.30  Aligned_cols=40  Identities=33%  Similarity=0.433  Sum_probs=32.8

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.++..+|+|.|+ |++|.+++..|...|.  ..+.+++.+.
T Consensus        19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGv--g~i~lvD~D~   58 (339)
T PRK07688         19 QQKLREKHVLIIGA-GALGTANAEMLVRAGV--GKVTIVDRDY   58 (339)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCCc
Confidence            34567789999995 8999999999999875  5888888754

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.43  E-value=0.003  Score=46.83  Aligned_cols=105  Identities=15%  Similarity=0.022  Sum_probs=67.5

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +|.|+|++|.+|..++..|+..+. +..++++++.+.... ..++.            ..    .....+.... .+.  
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~-~~elvL~Di~~a~g~-a~DL~------------~~----~~~~~i~~~~-~~~--   59 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPY-VSELSLYDIAGAAGV-AADLS------------HI----PTAASVKGFS-GEE--   59 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCC-CcEEEEecCCCCcEE-Echhh------------cC----CcCceEEEec-CCC--
Confidence            578999999999999999988753 357888887541110 00111            00    0111111100 011  


Q ss_pred             CCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         92 GIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        92 ~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                           ++...++++|+||-+||.... ..+..+.+..|+.-...+.+...+.
T Consensus        60 -----~~~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~  106 (312)
T TIGR01772        60 -----GLENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES  106 (312)
T ss_pred             -----chHHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh
Confidence                 245677899999999997543 4566678899999988888888776

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.39  E-value=0.0038  Score=46.39  Aligned_cols=107  Identities=14%  Similarity=0.143  Sum_probs=68.7

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++|.|+|+ |.+|..++..|+..|. +..+++++++...  +.....++         ....+. ..++.....   +
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~-~~el~L~D~~~~~--~~g~~~Dl---------~~~~~~-~~~~~i~~~---~   67 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGI-ADELVIIDINKEK--AEGDAMDL---------SHAVPF-TSPTKIYAG---D   67 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCCch--hHHHHHHH---------Hhhccc-cCCeEEEeC---C
Confidence            4579999997 9999999999988753 3478888885432  11111111         111110 012222211   1


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                               .+ .++++|+||-+||.... ..+..+.+..|..-...+++...+.
T Consensus        68 ---------~~-~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~  112 (315)
T PRK00066         68 ---------YS-DCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS  112 (315)
T ss_pred             ---------HH-HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                     22 35899999999997543 3566678899999999888888775

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.34  E-value=0.006  Score=45.13  Aligned_cols=114  Identities=11%  Similarity=0.039  Sum_probs=69.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ++|.|.|+ |++|+.++..|+..|.. ..+++++++... .....++....            ...........   .+ 
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~-~ei~l~D~~~~~~~~~a~dL~~~~------------~~~~~~~~i~~---~~-   62 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIA-DELVLIDINEEKAEGEALDLEDAL------------AFLPSPVKIKA---GD-   62 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCcchhhHhHhhHHHHh------------hccCCCeEEEc---CC-
Confidence            37889995 89999999999988642 278888886542 11111111110            00011222221   11 


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                              .. .+.++|+||.++|.... .++..+.+..|..-...+.+...+...-..++.+
T Consensus        63 --------~~-~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivv  116 (306)
T cd05291          63 --------YS-DCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVA  116 (306)
T ss_pred             --------HH-HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence                    22 34789999999997543 3456678899999999998888876322344443

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.26  E-value=0.0012  Score=49.54  Aligned_cols=40  Identities=33%  Similarity=0.419  Sum_probs=33.1

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.++.++|+|.| .|++|.+++..|+..|.  .++.+++++.
T Consensus        19 Q~~L~~~~VlIiG-~GglGs~va~~La~aGv--g~i~lvD~D~   58 (338)
T PRK12475         19 QRKIREKHVLIVG-AGALGAANAEALVRAGI--GKLTIADRDY   58 (338)
T ss_pred             HHhhcCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCc
Confidence            4567788999999 57799999999999975  5788888764

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.21  E-value=0.011  Score=44.00  Aligned_cols=109  Identities=16%  Similarity=0.137  Sum_probs=66.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .+.++|.|+|+ |.+|+.++..++..|.  ..++++++++.... .+.++-          ............+. +  +
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~--~~l~L~Di~~~~~~-g~~lDl----------~~~~~~~~~~~~i~-~--~   65 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNL--GDVVLYDVIKGVPQ-GKALDL----------KHFSTLVGSNINIL-G--T   65 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEECCCccch-hHHHHH----------hhhccccCCCeEEE-e--C
Confidence            45679999996 9999999998888763  46888887654221 111111          00000001111111 1  1


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      .        +++ .++++|+||.++|.... ..+..+.+..|..-...+.+...+.
T Consensus        66 ~--------d~~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~  112 (319)
T PTZ00117         66 N--------NYE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY  112 (319)
T ss_pred             C--------CHH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            1        244 55899999999986543 3455667788887777777777765

>PRK08223 hypothetical protein; Validated

Probab=97.17  E-value=0.0045  Score=45.27  Aligned_cols=96  Identities=20%  Similarity=0.141  Sum_probs=55.9

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CH-------HHHHHHHhcChhhhhhhhhccccC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TP-------KARLAEFSKLPVFERLRKECPAQL   76 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~   76 (152)
                      ++.++..+|+|.| .|++|.+++..|+..|.  .++.+++.+.... ++       .+.+...+.....+.++...+  .
T Consensus        22 Q~kL~~s~VlIvG-~GGLGs~va~~LA~aGV--G~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP--~   96 (287)
T PRK08223         22 QQRLRNSRVAIAG-LGGVGGIHLLTLARLGI--GKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINP--E   96 (287)
T ss_pred             HHHHhcCCEEEEC-CCHHHHHHHHHHHHhCC--CeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCC--C
Confidence            4567788999998 67899999999999975  6888887654321 11       011100000011112221111  2


Q ss_pred             CcEEEEEcccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         77 SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        77 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .++..+...++..       +...++++.|+|+.+.
T Consensus        97 v~V~~~~~~l~~~-------n~~~ll~~~DlVvD~~  125 (287)
T PRK08223         97 LEIRAFPEGIGKE-------NADAFLDGVDVYVDGL  125 (287)
T ss_pred             CEEEEEecccCcc-------CHHHHHhCCCEEEECC
Confidence            3455565556543       3677788999998654

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.14  E-value=0.016  Score=42.96  Aligned_cols=106  Identities=11%  Similarity=0.134  Sum_probs=67.1

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccC-CcEEEEEcccCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQL-SRLHIIEGDILQAN   90 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~   90 (152)
                      +|.|.|+ |.+|..++..|+..+ -+..+++++..+...  .-...+         +........ ..+....+|     
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~a--~g~a~D---------L~~~~~~~~~~~~~i~~~~-----   62 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALG-LFSEIVLIDVNEGVA--EGEALD---------FHHATALTYSTNTKIRAGD-----   62 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCcchh--hHHHHH---------HHhhhccCCCCCEEEEECC-----
Confidence            4778897 999999999998875 345788888754311  111111         111111111 123333222     


Q ss_pred             CCCChhHHHHHhccccEEEeccccccch-hh--HHHHHHhhhHHHHHHHHHHHhcC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLE-AE--LKENVAANTRGTQRLLDIALKMK  143 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~~--~~~~~~~n~~~~~~l~~~~~~~~  143 (152)
                              .+.++++|+||-+||....+ ++  ..+++..|..-...+.....+..
T Consensus        63 --------y~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~  110 (307)
T cd05290          63 --------YDDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT  110 (307)
T ss_pred             --------HHHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence                    23457899999999976543 33  36688999999999999888763

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.12  E-value=0.0015  Score=45.45  Aligned_cols=40  Identities=20%  Similarity=0.233  Sum_probs=33.4

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.+...+|+|.| .|++|.++++.|+..|.  .++.+++.+.
T Consensus        16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv--~~i~lvD~d~   55 (202)
T TIGR02356        16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGV--GTIVIVDDDH   55 (202)
T ss_pred             HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEecCCE
Confidence            4567788999998 78899999999999875  6888888764

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.10  E-value=0.019  Score=42.52  Aligned_cols=106  Identities=17%  Similarity=0.103  Sum_probs=67.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ++|.|+|+ |.+|+.++..|+.++.. ..+++++..+... -...++.            .......... .+.+| .  
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~~~~~G~a~DL~------------~~~~~~~~~~-~i~~~-~--   62 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINEEKAEGVALDLS------------HAAAPLGSDV-KITGD-G--   62 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEcccccccchhcchh------------hcchhccCce-EEecC-C--
Confidence            47899999 99999999999777542 2888888763211 0011111            1011011111 11111 1  


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                             + .+.+++.|+|+-.||.... .++-.++++.|..-...+.+...+.
T Consensus        63 -------~-y~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~  108 (313)
T COG0039          63 -------D-YEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY  108 (313)
T ss_pred             -------C-hhhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Confidence                   1 2345789999999997764 3477779999999999998888876

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.09  E-value=0.0014  Score=49.10  Aligned_cols=36  Identities=28%  Similarity=0.431  Sum_probs=30.3

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.|.||+|++|.++++.|.++++.+..+..+.+..
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~   36 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR   36 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc
Confidence            478999999999999999999878777777776654

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.09  E-value=0.0016  Score=45.20  Aligned_cols=40  Identities=20%  Similarity=0.238  Sum_probs=32.9

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .++.+..++++|.|+ |++|..++..|++.|.  ..+.+.+.+
T Consensus        15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gv--g~i~lvD~D   54 (200)
T TIGR02354        15 IVQKLEQATVAICGL-GGLGSNVAINLARAGI--GKLILVDFD   54 (200)
T ss_pred             HHHHHhCCcEEEECc-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence            345677889999995 7899999999999875  578888876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.05  E-value=0.017  Score=42.60  Aligned_cols=107  Identities=15%  Similarity=0.133  Sum_probs=62.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++|.|.|+ |.+|..++..++..|..  .|+++++++..  +.....++..         .........     .+...
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~--ev~L~D~~~~~--~~~~~~dl~~---------~~~~~~~~~-----~i~~~   62 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELG--DVVLFDIVEGV--PQGKALDIAE---------AAPVEGFDT-----KITGT   62 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEEECCCch--hHHHHHHHHh---------hhhhcCCCc-----EEEeC
Confidence            479999998 99999999999887642  78888875431  1111111100         000000111     11110


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      .      ++ +.++++|+||.+++.... ..+..+.+..|+.....+++...+.
T Consensus        63 ~------d~-~~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~  109 (307)
T PRK06223         63 N------DY-EDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY  109 (307)
T ss_pred             C------CH-HHHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            0      23 245799999999886542 2334456677777777777777665

>KOG1202|consensus

Probab=97.05  E-value=0.00095  Score=56.81  Aligned_cols=123  Identities=20%  Similarity=0.219  Sum_probs=82.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH-HHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ..+.++|+||-|+-|.+++.+|..+|.  +++++.+|+....--...+ ..+...             +..+.+-..|++
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~vrrWr~~-------------GVqV~vsT~nit 1831 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALMVRRWRRR-------------GVQVQVSTSNIT 1831 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHHHHHHHhc-------------CeEEEEecccch
Confidence            468999999999999999999999986  6888888876432222222 222211             234444455666


Q ss_pred             CCCCCCChhHHHHHh------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      ..+      .-..++      ..+-.|||+|+...       .++++++.-+..+.++.+|-+..++. +.++.||..|
T Consensus      1832 t~~------ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FS 1904 (2376)
T KOG1202|consen 1832 TAE------GARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFS 1904 (2376)
T ss_pred             hhh------hHHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEE
Confidence            543      223333      35678999987643       36777888888899999998888774 3456665443

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.04  E-value=0.017  Score=42.99  Aligned_cols=105  Identities=14%  Similarity=0.055  Sum_probs=66.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ++|.|+|+ |.+|..++..|+..+ -+..+++++...... -...++...            .+.. ....+...  .+ 
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~g~a~Dl~~~------------~~~~-~~~~v~~~--~d-   65 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKG-LADELVLVDVVEDKLKGEAMDLQHG------------SAFL-KNPKIEAD--KD-   65 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHHHHHHHHh------------hccC-CCCEEEEC--CC-
Confidence            48999995 999999999998875 345788888754311 111111111            1100 11111110  11 


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                              ++ .++++|+||-+||.... .++..+.+..|..-...+.+...+.
T Consensus        66 --------y~-~~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~  110 (312)
T cd05293          66 --------YS-VTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY  110 (312)
T ss_pred             --------HH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                    33 35889999999997553 3456678899999998888888876

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.03  E-value=0.0023  Score=44.84  Aligned_cols=40  Identities=20%  Similarity=0.175  Sum_probs=33.0

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.++..+|+|.| .|++|.+++..|+..|.  .++.+++.+.
T Consensus        23 q~~L~~~~V~ViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~   62 (212)
T PRK08644         23 LEKLKKAKVGIAG-AGGLGSNIAVALARSGV--GNLKLVDFDV   62 (212)
T ss_pred             HHHHhCCCEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCE
Confidence            4567788999999 68999999999999875  5788888763

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.02  E-value=0.0047  Score=44.30  Aligned_cols=40  Identities=20%  Similarity=0.148  Sum_probs=33.0

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.++..+|+|.|+ |++|.++++.|+..|.  .++.+++.+.
T Consensus        27 Q~~L~~~~VliiG~-GglGs~va~~La~~Gv--g~i~lvD~D~   66 (245)
T PRK05690         27 QEKLKAARVLVVGL-GGLGCAASQYLAAAGV--GTLTLVDFDT   66 (245)
T ss_pred             HHHhcCCeEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCE
Confidence            35667889999996 9999999999999875  6888887654

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.01  E-value=0.019  Score=44.60  Aligned_cols=117  Identities=17%  Similarity=0.069  Sum_probs=71.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh-------CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS-------CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~-------g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      -+|.|+|++|.+|.+++..|+..       +. +..++.+++.....  .-..-++         .........++.+..
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i-~~eLvliD~~~~~a--~G~amDL---------~daa~~~~~~v~i~~  168 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPI-ALKLLGSERSKQAL--EGVAMEL---------EDSLYPLLREVSIGI  168 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCc-ccEEEEEcCCcchh--HHHHHHH---------HHhhhhhcCceEEec
Confidence            48999999999999999999876       32 23677777654421  1111111         111100011221111


Q ss_pred             cccCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHh-cCCCcceEecC
Q psy11862         84 GDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALK-MKKLVVSLDIG  152 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~v~~S  152 (152)
                          +         -...++++|+||-.||.... .++..++++.|+.-...+.+...+ ...-..++.+|
T Consensus       169 ----~---------~ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        169 ----D---------PYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             ----C---------CHHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence                1         13455789999999997543 456777899999999999999888 43223455443

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.93  E-value=0.031  Score=40.44  Aligned_cols=106  Identities=15%  Similarity=0.066  Sum_probs=64.6

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCC-CCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCP-DIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~-~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      +.|+|++|.+|..++..|+..|. .+..++++++++... ....+++....            .. ....+.   .++  
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~------------~~-~~~~i~---~~~--   62 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVE------------PL-ADIKVS---ITD--   62 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhh------------hc-cCcEEE---ECC--
Confidence            46889989999999999988751 234788888765321 11111211110            00 011111   122  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccch-hhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLE-AELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                            ++...++++|+||..++....+ ....+....|+.....+.+...+.
T Consensus        63 ------d~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~  109 (263)
T cd00650          63 ------DPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY  109 (263)
T ss_pred             ------chHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                  2556678999999999875432 334446677888888888877765

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.93  E-value=0.0046  Score=43.79  Aligned_cols=40  Identities=25%  Similarity=0.238  Sum_probs=32.5

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.+...+|+|.| .|++|.++++.|+..|.  .++.+++.+.
T Consensus        16 q~~L~~~~VlivG-~GglGs~va~~La~~Gv--g~i~lvD~D~   55 (228)
T cd00757          16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAGV--GKLGLVDDDV   55 (228)
T ss_pred             HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCE
Confidence            4567788999998 78899999999999875  6787776543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.91  E-value=0.011  Score=46.03  Aligned_cols=111  Identities=13%  Similarity=0.006  Sum_probs=67.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh---CCCC-cEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS---CPDI-GKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~---g~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      -+|+||||+|.||++++..+++-   |++- ..+++++..+....+.-..-++.         ....-....+.+. .  
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~---------D~a~pll~~v~i~-~--  191 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVE---------DLAFPLLRGISVT-T--  191 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHH---------HhHHhhcCCcEEE-E--
Confidence            36999999999999999999883   5432 23455555322211111111111         1000001122222 1  


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcC
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMK  143 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~  143 (152)
                       +         ....++++|+||-.+|.... .++..+.++.|..-.....+...+..
T Consensus       192 -~---------~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a  239 (452)
T cd05295         192 -D---------LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNA  239 (452)
T ss_pred             -C---------CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence             1         24566899999999997543 45677789999999999988888763

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.89  E-value=0.003  Score=49.34  Aligned_cols=78  Identities=15%  Similarity=0.170  Sum_probs=49.0

Q ss_pred             cCCceEEEcCC----------------cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862          8 YAGRSVLVTGG----------------TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE   71 (152)
Q Consensus         8 ~~~~~ilItG~----------------~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (152)
                      ++|++++||+|                +|-.|.+|++++..+|.+|   .++.-.....                     
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~V---tlI~Gp~~~~---------------------  309 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEV---TLISGPVDLA---------------------  309 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcE---EEEeCCcCCC---------------------
Confidence            78999999987                4669999999999999754   4443211100                     


Q ss_pred             ccccCCcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccccccc
Q psy11862         72 CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL  117 (152)
Q Consensus        72 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~  117 (152)
                         .+..+.++..+-.++-    .+.+.+.+ ..|++|++|+..++
T Consensus       310 ---~p~~v~~i~V~ta~eM----~~av~~~~-~~Di~I~aAAVaDy  347 (475)
T PRK13982        310 ---DPQGVKVIHVESARQM----LAAVEAAL-PADIAIFAAAVADW  347 (475)
T ss_pred             ---CCCCceEEEecCHHHH----HHHHHhhC-CCCEEEEeccccce
Confidence               1244555555432211    11233333 37999999998775

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.85  E-value=0.0091  Score=42.68  Aligned_cols=41  Identities=20%  Similarity=0.177  Sum_probs=33.4

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      ++.++..+|+|.| .|++|.+++..|+..|.  .++.+++.+..
T Consensus        19 q~~L~~~~VlvvG-~GglGs~va~~La~~Gv--g~i~lvD~D~v   59 (240)
T TIGR02355        19 QEALKASRVLIVG-LGGLGCAASQYLAAAGV--GNLTLLDFDTV   59 (240)
T ss_pred             HHHHhCCcEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCCcc
Confidence            4557778999998 77899999999999865  68888887643

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.83  E-value=0.0054  Score=46.13  Aligned_cols=38  Identities=29%  Similarity=0.339  Sum_probs=31.0

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +..++.|.|++|++|.++++.|.++++.+..+..+...
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~   43 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA   43 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc
Confidence            45789999999999999999999877766677666543

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.82  E-value=0.016  Score=49.49  Aligned_cols=79  Identities=19%  Similarity=0.202  Sum_probs=52.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCc------------EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIG------------KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQL   76 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~------------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (152)
                      .+++|+|.|+ |++|+.+++.|.+. .++.            .|.+.+++.      ++.+.+...             .
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~------~~a~~la~~-------------~  626 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYL------KDAKETVEG-------------I  626 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCH------HHHHHHHHh-------------c
Confidence            4679999995 99999999999876 2322            244444431      222222110             1


Q ss_pred             CcEEEEEcccCCCCCCCChhHHHHHhccccEEEecccc
Q psy11862         77 SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAAS  114 (152)
Q Consensus        77 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~  114 (152)
                      +++..+..|++|.+      ++.++++++|+||++...
T Consensus       627 ~~~~~v~lDv~D~e------~L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        627 ENAEAVQLDVSDSE------SLLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             CCCceEEeecCCHH------HHHHhhcCCCEEEECCCc
Confidence            35667888988744      688887889999998754

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=96.77  E-value=0.0035  Score=47.77  Aligned_cols=37  Identities=19%  Similarity=0.452  Sum_probs=29.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..++|.|.||||++|.++++.|.++ +. ..+..+.++.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~-~el~~l~s~~   73 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANH-PD-FEITVMTADR   73 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhC-CC-CeEEEEEChh
Confidence            4568999999999999999999888 33 3677776643

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.77  E-value=0.0076  Score=39.03  Aligned_cols=92  Identities=18%  Similarity=0.219  Sum_probs=52.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CH-------HHHHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TP-------KARLAEFSKLPVFERLRKECPAQLSRLHI   81 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (152)
                      .++++|.| .|++|.++++.|+..|.  .++.+++.+.-.. ++       .+.+...+...+-..+....  ...++..
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv--~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n--p~~~v~~   76 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGV--GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN--PDVEVEA   76 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTT--SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS--TTSEEEE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCC--CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc--Cceeeee
Confidence            46888988 78899999999999976  6888887653211 00       00000000000001111111  1345667


Q ss_pred             EEcccCCCCCCCChhHHHHHhccccEEEeccc
Q psy11862         82 IEGDILQANLGIKDSDLLMLQEEVSVVFNGAA  113 (152)
Q Consensus        82 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~  113 (152)
                      +..++.+       +....++++.|+||.+..
T Consensus        77 ~~~~~~~-------~~~~~~~~~~d~vi~~~d  101 (135)
T PF00899_consen   77 IPEKIDE-------ENIEELLKDYDIVIDCVD  101 (135)
T ss_dssp             EESHCSH-------HHHHHHHHTSSEEEEESS
T ss_pred             eeccccc-------ccccccccCCCEEEEecC
Confidence            7677632       357777889999998753

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.74  E-value=0.005  Score=46.88  Aligned_cols=38  Identities=24%  Similarity=0.219  Sum_probs=31.7

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.++.++|+|.| .|++|.+++..|+..|.  .++.+++++
T Consensus       131 ~~l~~~~VlvvG-~GG~Gs~ia~~La~~Gv--g~i~lvD~d  168 (376)
T PRK08762        131 RRLLEARVLLIG-AGGLGSPAALYLAAAGV--GTLGIVDHD  168 (376)
T ss_pred             HHHhcCcEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence            456778899997 58899999999999875  688888876

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.72  E-value=0.044  Score=40.91  Aligned_cols=117  Identities=15%  Similarity=0.043  Sum_probs=68.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +.++|.|.| .|.+|..++..++..|.  ..+++++.++... ..+.++....          .........+...  . 
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~-~~~~ld~~~~----------~~~~~~~~~I~~~--~-   67 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIP-QGKALDISHS----------NVIAGSNSKVIGT--N-   67 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchh-hHHHHHHHhh----------hhccCCCeEEEEC--C-
Confidence            457999999 68999999999888765  3588888765432 1112211100          0000111222210  1 


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccch-h-----hHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLE-A-----ELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                              +++ .++++|+||.++|....+ .     +..+.+..|+.-...+.+...+......++.+
T Consensus        68 --------d~~-~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~  127 (321)
T PTZ00082         68 --------NYE-DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVI  127 (321)
T ss_pred             --------CHH-HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence                    132 458999999999875422 2     45557777888777777777765222244443

>PLN02602 lactate dehydrogenase

Probab=96.71  E-value=0.054  Score=40.95  Aligned_cols=105  Identities=13%  Similarity=0.106  Sum_probs=66.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ++|.|+|+ |.+|..++..|+..+. +..+++++..+... -...++...            .+. .....+ .+. .+ 
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~LiDi~~~~~~g~a~DL~~~------------~~~-~~~~~i-~~~-~d-   99 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDL-ADELALVDVNPDKLRGEMLDLQHA------------AAF-LPRTKI-LAS-TD-   99 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCCchhhHHHHHHHhh------------hhc-CCCCEE-EeC-CC-
Confidence            69999995 9999999999988753 35788888754311 111111111            110 111111 111 11 


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                              .. .++++|+||-+||.... .++..+.+..|+.-...+.+...+.
T Consensus       100 --------y~-~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~  144 (350)
T PLN02602        100 --------YA-VTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY  144 (350)
T ss_pred             --------HH-HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                    22 35789999999997543 3456678888999888888888776

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.70  E-value=0.011  Score=44.68  Aligned_cols=40  Identities=23%  Similarity=0.211  Sum_probs=32.9

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.+++.+|+|.| .|++|.+++..|+..|.  .++.+++.+.
T Consensus        23 q~~L~~~~VlivG-~GGlGs~~a~~La~~Gv--g~i~lvD~D~   62 (355)
T PRK05597         23 QQSLFDAKVAVIG-AGGLGSPALLYLAGAGV--GHITIIDDDT   62 (355)
T ss_pred             HHHHhCCeEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCCE
Confidence            3457788999998 58899999999999865  6888888764

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.69  E-value=0.031  Score=38.00  Aligned_cols=93  Identities=17%  Similarity=0.189  Sum_probs=52.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHh--cChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS--KLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+.++++.|.| .|.||+++++.+...|.   +|+.++|+.....   ......  ...+. ++-     ...++.++.+
T Consensus        33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~---~V~~~d~~~~~~~---~~~~~~~~~~~l~-ell-----~~aDiv~~~~   99 (178)
T PF02826_consen   33 ELRGKTVGIIG-YGRIGRAVARRLKAFGM---RVIGYDRSPKPEE---GADEFGVEYVSLD-ELL-----AQADIVSLHL   99 (178)
T ss_dssp             -STTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCHHHH---HHHHTTEEESSHH-HHH-----HH-SEEEE-S
T ss_pred             ccCCCEEEEEE-EcCCcCeEeeeeecCCc---eeEEecccCChhh---hcccccceeeehh-hhc-----chhhhhhhhh
Confidence            46789999998 79999999999998884   8889988654211   011110  00100 000     0156667777


Q ss_pred             ccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         85 DILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .+++...++-.++..+.+++--++||.+
T Consensus       100 plt~~T~~li~~~~l~~mk~ga~lvN~a  127 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPGAVLVNVA  127 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred             ccccccceeeeeeeeeccccceEEEecc
Confidence            7666554444344445455444666654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.68  E-value=0.028  Score=43.11  Aligned_cols=39  Identities=26%  Similarity=0.226  Sum_probs=31.7

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..++..+|+|.| .|++|.+++..|+..|.  .++.+++.+.
T Consensus        38 ~~L~~~~VlviG-~GGlGs~va~~La~~Gv--g~i~lvD~D~   76 (392)
T PRK07878         38 KRLKNARVLVIG-AGGLGSPTLLYLAAAGV--GTLGIVEFDV   76 (392)
T ss_pred             HHHhcCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCCE
Confidence            456778999998 77899999999999875  6788877653

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.67  E-value=0.012  Score=45.59  Aligned_cols=72  Identities=17%  Similarity=0.254  Sum_probs=47.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++|+|+ |.+|.++++.|.+.|+   .++++++++.      .+..+..              ..++.++.+|.+++.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~---~v~vid~~~~------~~~~~~~--------------~~~~~~~~gd~~~~~   56 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENN---DVTVIDTDEE------RLRRLQD--------------RLDVRTVVGNGSSPD   56 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC---cEEEEECCHH------HHHHHHh--------------hcCEEEEEeCCCCHH
Confidence            47889986 9999999999999886   5567776432      2222211              134677788877643


Q ss_pred             CCCChhHHHHH-hccccEEEecc
Q psy11862         91 LGIKDSDLLML-QEEVSVVFNGA  112 (152)
Q Consensus        91 ~~~~~~~~~~~-~~~~d~vi~~a  112 (152)
                            .+.++ ++++|.++-+.
T Consensus        57 ------~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496         57 ------VLREAGAEDADLLIAVT   73 (453)
T ss_pred             ------HHHHcCCCcCCEEEEec
Confidence                  45555 56778777654

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.62  E-value=0.083  Score=40.45  Aligned_cols=117  Identities=17%  Similarity=0.089  Sum_probs=68.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCc-----EEEEe--ecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIG-----KVYIL--CRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~-----~v~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      -+|.|+|++|.+|.+++..|+..+. +.     .++++  ++...  .+.-..-++         ..........+.+..
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l-~~~~~ei~L~L~diD~~~~--~a~g~a~DL---------~d~a~~~~~~v~i~~  112 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEV-FGQDQPIALKLLGSERSKE--ALEGVAMEL---------EDSLYPLLREVSIGI  112 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEeccCccch--hhhHHHHHH---------HHhhhhhcCceEEec
Confidence            4899999999999999999988753 22     23333  43322  111111111         111100011221111


Q ss_pred             cccCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCC-cceEecC
Q psy11862         84 GDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKL-VVSLDIG  152 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~S  152 (152)
                      .             -...++++|+||-+||.... .++..+++..|+.-...+.....+..+. .+++.+|
T Consensus       113 ~-------------~y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       113 D-------------PYEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             C-------------CHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            1             13455789999999997653 3567778999999999999988884323 3445443

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.60  E-value=0.0048  Score=46.25  Aligned_cols=37  Identities=24%  Similarity=0.381  Sum_probs=30.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +++|.|+||||++|.++++.|.++++.+..+..+...
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~   40 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS   40 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc
Confidence            3689999999999999999999876777777666543

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.55  E-value=0.027  Score=43.69  Aligned_cols=36  Identities=22%  Similarity=0.188  Sum_probs=29.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++++|||+++ +|.++++.|.+.|+   .|++.++..
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~---~V~~~d~~~   38 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGA---NVTVNDGKP   38 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCC---EEEEEcCCC
Confidence            4678999999887 99999999999986   567766543

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.52  E-value=0.022  Score=42.57  Aligned_cols=87  Identities=17%  Similarity=0.175  Sum_probs=58.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-------CHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-------TPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      +.++++-|.| .|.||+.+++.+...|.   +|+..++.....       ...+.++++.+.              .++.
T Consensus       140 l~gkTvGIiG-~G~IG~~va~~l~afgm---~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~--------------sDiv  201 (324)
T COG0111         140 LAGKTVGIIG-LGRIGRAVAKRLKAFGM---KVIGYDPYSPRERAGVDGVVGVDSLDELLAE--------------ADIL  201 (324)
T ss_pred             ccCCEEEEEC-CCHHHHHHHHHHHhCCC---eEEEECCCCchhhhccccceecccHHHHHhh--------------CCEE
Confidence            5689999999 89999999999999885   788888732221       001234444332              6788


Q ss_pred             EEEcccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .+...++++..++--.+..+.++.--++||++
T Consensus       202 ~lh~PlT~eT~g~i~~~~~a~MK~gailIN~a  233 (324)
T COG0111         202 TLHLPLTPETRGLINAEELAKMKPGAILINAA  233 (324)
T ss_pred             EEcCCCCcchhcccCHHHHhhCCCCeEEEECC
Confidence            88888888765555344444444334888887

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.51  E-value=0.011  Score=39.00  Aligned_cols=37  Identities=24%  Similarity=0.354  Sum_probs=29.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .++++++|+|+ |.+|..+++.|.+.|.  ..|.+.+|+.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~--~~v~v~~r~~   53 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGA--AKIVIVNRTL   53 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCH
Confidence            45789999997 8999999999998852  4677777753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK08328 hypothetical protein; Provisional

Probab=96.49  E-value=0.022  Score=40.43  Aligned_cols=40  Identities=18%  Similarity=0.222  Sum_probs=32.5

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.+++.+|+|.| .|++|.+++..|+..|.  .++.+++.+.
T Consensus        22 q~~L~~~~VlIiG-~GGlGs~ia~~La~~Gv--g~i~lvD~D~   61 (231)
T PRK08328         22 QEKLKKAKVAVVG-VGGLGSPVAYYLAAAGV--GRILLIDEQT   61 (231)
T ss_pred             HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCc
Confidence            3456778999998 77899999999999875  6888887654

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.49  E-value=0.017  Score=43.91  Aligned_cols=40  Identities=20%  Similarity=0.286  Sum_probs=32.7

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.++..+|+|.| .|++|.+++..|+..|.  .++.+++.+.
T Consensus        36 q~~l~~~~VliiG-~GglG~~v~~~La~~Gv--g~i~ivD~D~   75 (370)
T PRK05600         36 QERLHNARVLVIG-AGGLGCPAMQSLASAGV--GTITLIDDDT   75 (370)
T ss_pred             HHHhcCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEeCCE
Confidence            3456778999998 67899999999999865  6888888763

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.46  E-value=0.027  Score=39.07  Aligned_cols=40  Identities=20%  Similarity=0.223  Sum_probs=31.8

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.++..+|+|.|+ |++|.++++.|+..|.  .++.+++.+.
T Consensus        16 Q~~L~~s~VlIiG~-gglG~evak~La~~GV--g~i~lvD~d~   55 (197)
T cd01492          16 QKRLRSARILLIGL-KGLGAEIAKNLVLSGI--GSLTILDDRT   55 (197)
T ss_pred             HHHHHhCcEEEEcC-CHHHHHHHHHHHHcCC--CEEEEEECCc
Confidence            34567789999985 5599999999999875  6888887653

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.41  E-value=0.09  Score=38.98  Aligned_cols=115  Identities=11%  Similarity=0.104  Sum_probs=66.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      +++.|.|+ |.+|..++..++..|..  .|++++..+.... .+.+ ++...         ......     ...+.-..
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~--~VvlvDi~~~l~~-g~a~-d~~~~---------~~~~~~-----~~~i~~t~   62 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELA--DLVLLDVVEGIPQ-GKAL-DMYEA---------SPVGGF-----DTKVTGTN   62 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCC--eEEEEeCCCChhH-HHHH-hhhhh---------hhccCC-----CcEEEecC
Confidence            47888895 99999999999998752  5788887433111 1111 11100         000000     01111000


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                            ++.. ++++|+||-++|.... .++..+.+..|+.....+++...+...-..++.+
T Consensus        63 ------d~~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~  117 (305)
T TIGR01763        63 ------NYAD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVV  117 (305)
T ss_pred             ------CHHH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence                  2333 5789999999996543 3345567888999988888887765322334443

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.37  E-value=0.037  Score=41.13  Aligned_cols=88  Identities=17%  Similarity=0.167  Sum_probs=53.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH---HHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP---KARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      -+.++++.|.| .|.||+.+++.+...|-   +|++.+|.......   ...+.++.+              ..++..+.
T Consensus       142 ~L~gktvGIiG-~G~IG~~vA~~~~~fgm---~V~~~d~~~~~~~~~~~~~~l~ell~--------------~sDvv~lh  203 (311)
T PRK08410        142 EIKGKKWGIIG-LGTIGKRVAKIAQAFGA---KVVYYSTSGKNKNEEYERVSLEELLK--------------TSDIISIH  203 (311)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhhcCC---EEEEECCCccccccCceeecHHHHhh--------------cCCEEEEe
Confidence            37899999999 89999999999987763   78888875321100   012222222              15677777


Q ss_pred             cccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         84 GDILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      +.+++...++-.++..+.+++--++||.+
T Consensus       204 ~Plt~~T~~li~~~~~~~Mk~~a~lIN~a  232 (311)
T PRK08410        204 APLNEKTKNLIAYKELKLLKDGAILINVG  232 (311)
T ss_pred             CCCCchhhcccCHHHHHhCCCCeEEEECC
Confidence            77766543333334444445444555544

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.36  E-value=0.052  Score=35.39  Aligned_cols=33  Identities=30%  Similarity=0.362  Sum_probs=26.9

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++|.|. |++|.++++.|...|.  .++.+++.+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFDT   33 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCCC
Confidence            4788884 8999999999999876  5788887653

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.34  E-value=0.021  Score=43.02  Aligned_cols=34  Identities=26%  Similarity=0.500  Sum_probs=26.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      ++++.|.|++|++|+++++.|.+. +.+ ++..+.+
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~-p~~-elv~v~~   35 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNH-PEV-EIVAVTS   35 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEEC
Confidence            478999999999999999999876 344 5545444

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.32  E-value=0.03  Score=41.15  Aligned_cols=38  Identities=11%  Similarity=0.168  Sum_probs=30.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .++++++|.|+ |+.+++++..|...|.  .+|+++.|+..
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~--~~i~i~nRt~~  159 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDE  159 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCcc
Confidence            46789999996 5559999999988765  68999999743

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.30  E-value=0.0042  Score=46.08  Aligned_cols=77  Identities=18%  Similarity=0.283  Sum_probs=51.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ..++|-||+||.|..++++|.++|.   +..+..|+.      .++..+..            ..+..+..+++..    
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~---~~aLAgRs~------~kl~~l~~------------~LG~~~~~~p~~~----   61 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGL---TAALAGRSS------AKLDALRA------------SLGPEAAVFPLGV----   61 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCC---chhhccCCH------HHHHHHHH------------hcCccccccCCCC----
Confidence            4689999999999999999999975   335556653      23332221            1123333333332    


Q ss_pred             CCCChhHHHHHhccccEEEecccccc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLK  116 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~  116 (152)
                          +..+.+...+.++|+||+|...
T Consensus        62 ----p~~~~~~~~~~~VVlncvGPyt   83 (382)
T COG3268          62 ----PAALEAMASRTQVVLNCVGPYT   83 (382)
T ss_pred             ----HHHHHHHHhcceEEEecccccc
Confidence                2357888889999999999764

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.29  E-value=0.025  Score=38.43  Aligned_cols=89  Identities=19%  Similarity=0.201  Sum_probs=49.6

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC-CCHHHHH---HHHh---cChhhhhhhhhccccCCcEEEEEc
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG-LTPKARL---AEFS---KLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~-~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      +++|.| .|++|.+++..|+..|.  .++.+.+.+... .++...+   ..+.   .....+.+++..+  ..++..+..
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp--~v~i~~~~~   75 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGV--GNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINP--FVKIEAINI   75 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCC--CCEEEEEEe
Confidence            477888 68999999999999875  578888876421 1211100   0110   0011111111111  234545554


Q ss_pred             ccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         85 DILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .+..       +.+.+.+++.|+||.+.
T Consensus        76 ~~~~-------~~~~~~l~~~DlVi~~~   96 (174)
T cd01487          76 KIDE-------NNLEGLFGDCDIVVEAF   96 (174)
T ss_pred             ecCh-------hhHHHHhcCCCEEEECC
Confidence            4433       24677788999999874

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.26  E-value=0.032  Score=40.31  Aligned_cols=35  Identities=31%  Similarity=0.432  Sum_probs=26.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +++.|+|++|.+|+.+++.+.+. .++..+.+++++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~   36 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRP   36 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence            58999999999999999888765 344444445554

>PRK07411 hypothetical protein; Validated

Probab=96.23  E-value=0.028  Score=43.10  Aligned_cols=97  Identities=20%  Similarity=0.204  Sum_probs=55.4

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CH-------HHHHHHHhcChhhhhhhhhccccC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TP-------KARLAEFSKLPVFERLRKECPAQL   76 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~   76 (152)
                      ++.++..+|+|.| .|++|.+++..|+..|.  .++.+++.+.... ++       .+.+...+.....+.++...+  .
T Consensus        33 q~~L~~~~VlivG-~GGlG~~va~~La~~Gv--g~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np--~  107 (390)
T PRK07411         33 QKRLKAASVLCIG-TGGLGSPLLLYLAAAGI--GRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINP--Y  107 (390)
T ss_pred             HHHHhcCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCC--C
Confidence            3456778999998 67899999999999865  6888887654221 11       011110000011112221111  2


Q ss_pred             CcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccc
Q psy11862         77 SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA  113 (152)
Q Consensus        77 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~  113 (152)
                      .++..+...++..       .....+.+.|+||.+..
T Consensus       108 v~v~~~~~~~~~~-------~~~~~~~~~D~Vvd~~d  137 (390)
T PRK07411        108 CQVDLYETRLSSE-------NALDILAPYDVVVDGTD  137 (390)
T ss_pred             CeEEEEecccCHH-------hHHHHHhCCCEEEECCC
Confidence            3455555555442       35667788999988753

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.22  E-value=0.018  Score=43.20  Aligned_cols=38  Identities=32%  Similarity=0.538  Sum_probs=31.0

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +..++.|.||||++|.++++.|.++.+.+.++..+..+
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~   40 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE   40 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence            45789999999999999999999865566777766654

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.21  E-value=0.024  Score=42.70  Aligned_cols=33  Identities=27%  Similarity=0.617  Sum_probs=25.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEE-Eeec
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVY-ILCR   45 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~-~~~r   45 (152)
                      ++|.|.|+||++|..+++.|.++ +.+ .+. ++++
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~h-P~~-el~~l~~s   34 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNH-PEV-EITYLVSS   34 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEecc
Confidence            47899999999999999999876 444 455 4343

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK14851 hypothetical protein; Provisional

Probab=96.19  E-value=0.028  Score=46.05  Aligned_cols=96  Identities=20%  Similarity=0.237  Sum_probs=57.2

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHH----HHHHHhcC---hhhhhhhhhccccC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKA----RLAEFSKL---PVFERLRKECPAQL   76 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~----~~~~~~~~---~~~~~~~~~~~~~~   76 (152)
                      ++.+++.+|+|.| .|++|.+++..|+..|.  .++.+++.+.... ++.-    ....+...   .+-+.+....+  .
T Consensus        38 Q~kL~~~~VlIvG-~GGlGs~va~~Lar~GV--G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP--~  112 (679)
T PRK14851         38 QERLAEAKVAIPG-MGGVGGVHLITMVRTGI--GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINP--F  112 (679)
T ss_pred             HHHHhcCeEEEEC-cCHHHHHHHHHHHHhCC--CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCC--C
Confidence            4567888999999 78999999999999976  5788777543221 1110    00111000   01111111111  2


Q ss_pred             CcEEEEEcccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         77 SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        77 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .+++.+...++.       +++..+++++|+||.+.
T Consensus       113 ~~I~~~~~~i~~-------~n~~~~l~~~DvVid~~  141 (679)
T PRK14851        113 LEITPFPAGINA-------DNMDAFLDGVDVVLDGL  141 (679)
T ss_pred             CeEEEEecCCCh-------HHHHHHHhCCCEEEECC
Confidence            456666666643       35778889999999765

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.18  E-value=0.019  Score=42.90  Aligned_cols=35  Identities=26%  Similarity=0.450  Sum_probs=28.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ++++.|.|++|+.|.+|++.|..+ +.+. +.+.+.+
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~H-p~ve-~~~~ss~   36 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGH-PDVE-LILISSR   36 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcC-CCeE-EEEeech
Confidence            578999999999999999999998 5665 5555443

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.17  E-value=0.031  Score=37.74  Aligned_cols=37  Identities=30%  Similarity=0.379  Sum_probs=31.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+.+++++|.|+++.+|..+++.|.+.|.   +|+++.|+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~---~V~v~~r~   77 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA---TVTVCHSK   77 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCC---EEEEEECC
Confidence            47899999999977889999999999874   57777775

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.12  E-value=0.18  Score=37.36  Aligned_cols=105  Identities=17%  Similarity=0.183  Sum_probs=64.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |++.|.|+ |.+|..++..|+..|. +..+++++++...  +.....++...         ... .........      
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~--~~g~a~dl~~~---------~~~-~~~~~i~~~------   60 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAK--AEGEAMDLAHG---------TPF-VKPVRIYAG------   60 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchh--hhhHHHHHHcc---------ccc-cCCeEEeeC------
Confidence            46889997 8999999999999873 3478888886431  11111111110         000 011111111      


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                            +. ..++++|++|-+++.... ..+..+....|+.-...+.+...+.
T Consensus        61 ------d~-~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~  106 (308)
T cd05292          61 ------DY-ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY  106 (308)
T ss_pred             ------CH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                  12 236899999999986542 3456667788888888887777665

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.05  E-value=0.045  Score=37.97  Aligned_cols=40  Identities=15%  Similarity=0.210  Sum_probs=31.9

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.++..+|+|.|.+| +|.++++.|+..|.  .++.+++.+.
T Consensus        14 q~~L~~s~VlviG~gg-lGsevak~L~~~GV--g~i~lvD~d~   53 (198)
T cd01485          14 QNKLRSAKVLIIGAGA-LGAEIAKNLVLAGI--DSITIVDHRL   53 (198)
T ss_pred             HHHHhhCcEEEECCCH-HHHHHHHHHHHcCC--CEEEEEECCc
Confidence            3456778999998655 99999999999865  6888887654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.05  E-value=0.035  Score=42.87  Aligned_cols=39  Identities=21%  Similarity=0.426  Sum_probs=32.3

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..+.+++++|.|+ |+.|..++..|...|.  ..+++..|+.
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~  215 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTI  215 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence            3467899999995 8999999999998865  5788888863

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.98  E-value=0.22  Score=36.85  Aligned_cols=111  Identities=14%  Similarity=0.055  Sum_probs=66.2

Q ss_pred             EcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCCC
Q psy11862         15 VTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIK   94 (152)
Q Consensus        15 ItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   94 (152)
                      |.| .|.+|..++..|+..+. +..++++++....  +.-...++         ..........+.+. .  .+      
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l-~~el~L~Di~~~~--~~g~a~Dl---------~~~~~~~~~~~~i~-~--~~------   58 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGI-ADEIVLIDINKDK--AEGEAMDL---------QHAASFLPTPKKIR-S--GD------   58 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCC-CCEEEEEeCCCCh--hhHHHHHH---------HHhhcccCCCeEEe-c--CC------
Confidence            345 59999999999988753 4578888875431  11111111         11111011222222 1  11      


Q ss_pred             hhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         95 DSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        95 ~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                          .+.++++|+||-+||.... ..+..+.+..|+.-...+.+...+...-..++.+
T Consensus        59 ----~~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivv  112 (299)
T TIGR01771        59 ----YSDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVA  112 (299)
T ss_pred             ----HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence                2356789999999997543 3456678899999999998888876322344443

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.94  E-value=0.032  Score=35.64  Aligned_cols=36  Identities=31%  Similarity=0.434  Sum_probs=27.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++|.|.|.+|..|+.+++.+.+. .+..-+-.++|++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~   36 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP   36 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence            47999999999999999999995 3434455566654

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG1198|consensus

Probab=95.91  E-value=0.045  Score=41.29  Aligned_cols=29  Identities=31%  Similarity=0.493  Sum_probs=23.3

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSC   34 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g   34 (152)
                      ..-+++.+||.||+|++|++.++-....+
T Consensus       154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~  182 (347)
T KOG1198|consen  154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAG  182 (347)
T ss_pred             ccCCCCeEEEEeCCcHHHHHHHHHHHhcC
Confidence            34577899999999999999776666654

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.89  E-value=0.041  Score=40.37  Aligned_cols=35  Identities=29%  Similarity=0.429  Sum_probs=29.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      +++++++|.|++|.+|++++..|.+.|.   .|.++.|
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~ga---tVtv~~~  191 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANA---TVTICHS  191 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCC---EEEEEeC
Confidence            6889999999999999999999998874   5666555

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.88  E-value=0.067  Score=40.16  Aligned_cols=36  Identities=14%  Similarity=0.303  Sum_probs=30.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++++.|.| .|.||+.+++.|...|.   +|+..+|+.
T Consensus       148 L~gktvgIiG-~G~IG~~vA~~l~~~G~---~V~~~d~~~  183 (333)
T PRK13243        148 VYGKTIGIIG-FGRIGQAVARRAKGFGM---RILYYSRTR  183 (333)
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCC---EEEEECCCC
Confidence            6889999999 69999999999998875   677788754

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.88  E-value=0.095  Score=39.00  Aligned_cols=90  Identities=21%  Similarity=0.254  Sum_probs=50.1

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CH-------HHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TP-------KARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      +|+|.| .|++|.++++.|+..|.  ..+.+++.+.... ++       .+.+...+.....+.+++..+  ..++..+.
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gv--g~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp--~v~V~~~~   75 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGF--GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNP--NVKIVAYH   75 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcC--CeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCC--CCeEEEEe
Confidence            478888 58999999999999875  6888887654321 11       011111111111112221111  24556666


Q ss_pred             cccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         84 GDILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .++.+..+      ....+++.|+||.+.
T Consensus        76 ~~i~~~~~------~~~f~~~~DvVv~a~   98 (312)
T cd01489          76 ANIKDPDF------NVEFFKQFDLVFNAL   98 (312)
T ss_pred             ccCCCccc------hHHHHhcCCEEEECC
Confidence            67665321      345667889998774

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.87  E-value=0.1  Score=36.32  Aligned_cols=37  Identities=16%  Similarity=0.257  Sum_probs=29.6

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      +-.+++++++|.|| |-+|...++.|++.|.   .|.++++
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga---~V~VIs~   41 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGA---HIVVISP   41 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEcC
Confidence            33478999999995 8899999999999985   5555554

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.80  E-value=0.024  Score=42.37  Aligned_cols=35  Identities=23%  Similarity=0.321  Sum_probs=26.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .+.++||+||+|++|...++-....|.  ..+...++
T Consensus       142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~--~~v~~~~s  176 (326)
T COG0604         142 PGETVLVHGAAGGVGSAAIQLAKALGA--TVVAVVSS  176 (326)
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC--cEEEEecC
Confidence            378999999999999998877777775  24444443

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.80  E-value=0.037  Score=40.52  Aligned_cols=37  Identities=22%  Similarity=0.209  Sum_probs=30.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .++++++|.| +|+.+++++..|.+.|.  .+|+++.|+.
T Consensus       123 ~~~k~vlvlG-aGGaarai~~aL~~~G~--~~i~I~nRt~  159 (282)
T TIGR01809       123 LAGFRGLVIG-AGGTSRAAVYALASLGV--TDITVINRNP  159 (282)
T ss_pred             cCCceEEEEc-CcHHHHHHHHHHHHcCC--CeEEEEeCCH
Confidence            4678899998 58889999999999865  6888888863

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.79  E-value=0.11  Score=38.76  Aligned_cols=88  Identities=14%  Similarity=0.127  Sum_probs=51.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-C-HHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-T-PKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      -+.++++.|.| .|.||+++++.+...|.   +|++.+|..... . ....+.++.+              ..++..+.+
T Consensus       144 ~l~gktvgIiG-~G~IG~~va~~l~~fg~---~V~~~~~~~~~~~~~~~~~l~ell~--------------~sDiv~l~~  205 (314)
T PRK06932        144 DVRGSTLGVFG-KGCLGTEVGRLAQALGM---KVLYAEHKGASVCREGYTPFEEVLK--------------QADIVTLHC  205 (314)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhcCCC---EEEEECCCcccccccccCCHHHHHH--------------hCCEEEEcC
Confidence            36889999999 79999999999977764   677776643211 0 0112222222              156666667


Q ss_pred             ccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         85 DILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .++....++--.+..+.+++--++||.+
T Consensus       206 Plt~~T~~li~~~~l~~mk~ga~lIN~a  233 (314)
T PRK06932        206 PLTETTQNLINAETLALMKPTAFLINTG  233 (314)
T ss_pred             CCChHHhcccCHHHHHhCCCCeEEEECC
Confidence            6666543333333444444444555554

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.79  E-value=0.018  Score=43.45  Aligned_cols=35  Identities=23%  Similarity=0.219  Sum_probs=27.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.++.|+||+|++|+++++.|.++. . .++..+.++
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p-~-~el~~~~~s   37 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHP-W-FEVTALAAS   37 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCC-C-ceEEEEEcC
Confidence            5799999999999999999998763 3 366666443

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.75  E-value=0.057  Score=39.61  Aligned_cols=37  Identities=19%  Similarity=0.142  Sum_probs=30.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .++++++|.| +|+.|++++..|...|.  .+|+++.|+.
T Consensus       125 ~~~k~vlIlG-aGGaaraia~aL~~~G~--~~I~I~nR~~  161 (284)
T PRK12549        125 ASLERVVQLG-AGGAGAAVAHALLTLGV--ERLTIFDVDP  161 (284)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence            4568999999 57799999999999864  6888888864

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.75  E-value=0.044  Score=38.80  Aligned_cols=74  Identities=19%  Similarity=0.325  Sum_probs=48.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++|.| .|-+|..+++.|.+.|++   |+++.+++.      ++.+..+.             ......+.+|-+++.
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~---Vv~Id~d~~------~~~~~~~~-------------~~~~~~v~gd~t~~~   57 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHN---VVLIDRDEE------RVEEFLAD-------------ELDTHVVIGDATDED   57 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCc---eEEEEcCHH------HHHHHhhh-------------hcceEEEEecCCCHH
Confidence            4677777 778899999999999984   456665432      22221110             146778889988854


Q ss_pred             CCCChhHHHHH-hccccEEEeccc
Q psy11862         91 LGIKDSDLLML-QEEVSVVFNGAA  113 (152)
Q Consensus        91 ~~~~~~~~~~~-~~~~d~vi~~a~  113 (152)
                            -+.++ +..+|+++-.-+
T Consensus        58 ------~L~~agi~~aD~vva~t~   75 (225)
T COG0569          58 ------VLEEAGIDDADAVVAATG   75 (225)
T ss_pred             ------HHHhcCCCcCCEEEEeeC
Confidence                  35555 567888886544

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.73  E-value=0.13  Score=38.41  Aligned_cols=88  Identities=16%  Similarity=0.124  Sum_probs=52.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH-HHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP-KARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .+.++++.|.| .|.||+++++.+...|.   +|++.+|....... ...+.++.+              ..++..+.+.
T Consensus       145 ~l~gktvgIiG-~G~IG~~vA~~l~~fgm---~V~~~~~~~~~~~~~~~~l~ell~--------------~sDiv~l~lP  206 (317)
T PRK06487        145 ELEGKTLGLLG-HGELGGAVARLAEAFGM---RVLIGQLPGRPARPDRLPLDELLP--------------QVDALTLHCP  206 (317)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhhCCC---EEEEECCCCCcccccccCHHHHHH--------------hCCEEEECCC
Confidence            36889999999 79999999999987764   77777765322110 111222222              1566666676


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      ++....++-..+..+.++.--++||.+
T Consensus       207 lt~~T~~li~~~~~~~mk~ga~lIN~a  233 (317)
T PRK06487        207 LTEHTRHLIGARELALMKPGALLINTA  233 (317)
T ss_pred             CChHHhcCcCHHHHhcCCCCeEEEECC
Confidence            665543333333444444444555554

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.72  E-value=0.076  Score=37.80  Aligned_cols=40  Identities=28%  Similarity=0.221  Sum_probs=32.5

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.++..+++|.| .|++|.++++.|++.|.  .++.+++.+.
T Consensus         6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~GV--g~i~LvD~D~   45 (231)
T cd00755           6 LEKLRNAHVAVVG-LGGVGSWAAEALARSGV--GKLTLIDFDV   45 (231)
T ss_pred             HHHHhCCCEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCCE
Confidence            3456778999998 78899999999999875  6888887654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.70  E-value=0.064  Score=39.35  Aligned_cols=36  Identities=25%  Similarity=0.365  Sum_probs=30.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .++|++++|.|.++.+|+.++..|.+.|.   .|.++.+
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~ga---tVtv~~s  190 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNA---SVTILHS  190 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEEeC
Confidence            37899999999999999999999998874   5555554

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.70  E-value=0.063  Score=39.39  Aligned_cols=37  Identities=19%  Similarity=0.127  Sum_probs=30.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .++++++|.|+ ||.+++++..|.+.|.  .+++++.|+.
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~--~~i~i~nR~~  161 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT  161 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCH
Confidence            45788999995 8889999999998865  6888888853

>PRK14852 hypothetical protein; Provisional

Probab=95.65  E-value=0.059  Score=45.69  Aligned_cols=97  Identities=16%  Similarity=0.211  Sum_probs=57.0

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHH----HHHHHhcC---hhhhhhhhhccccC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKA----RLAEFSKL---PVFERLRKECPAQL   76 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~----~~~~~~~~---~~~~~~~~~~~~~~   76 (152)
                      ++.++..+|+|.| .||+|.+++..|+..|.  .++.+++-+.... ++.-    ....+...   .+.+.+....+  .
T Consensus       327 Q~kL~~srVlVvG-lGGlGs~ia~~LAraGV--G~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP--~  401 (989)
T PRK14852        327 QRRLLRSRVAIAG-LGGVGGIHLMTLARTGI--GNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNP--F  401 (989)
T ss_pred             HHHHhcCcEEEEC-CcHHHHHHHHHHHHcCC--CeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCC--C
Confidence            4567788999998 78899999999999975  6787777553221 1100    00111100   11112221111  2


Q ss_pred             CcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccc
Q psy11862         77 SRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA  113 (152)
Q Consensus        77 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~  113 (152)
                      .+++.+...++.       +.+..+++++|+||.+..
T Consensus       402 v~I~~~~~~I~~-------en~~~fl~~~DiVVDa~D  431 (989)
T PRK14852        402 LDIRSFPEGVAA-------ETIDAFLKDVDLLVDGID  431 (989)
T ss_pred             CeEEEEecCCCH-------HHHHHHhhCCCEEEECCC
Confidence            455566555543       357788899999997653

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.64  E-value=0.12  Score=32.12  Aligned_cols=69  Identities=23%  Similarity=0.301  Sum_probs=44.5

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      ++|.|. |.+|..+++.|.+.+   ..++++.+++      +....+..               ..+.++.+|.++++  
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~---~~vvvid~d~------~~~~~~~~---------------~~~~~i~gd~~~~~--   53 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGG---IDVVVIDRDP------ERVEELRE---------------EGVEVIYGDATDPE--   53 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTT---SEEEEEESSH------HHHHHHHH---------------TTSEEEES-TTSHH--
T ss_pred             eEEEcC-CHHHHHHHHHHHhCC---CEEEEEECCc------HHHHHHHh---------------cccccccccchhhh--
Confidence            567774 689999999999965   3677777642      22333222               34778999999854  


Q ss_pred             CChhHHHHH-hccccEEEecc
Q psy11862         93 IKDSDLLML-QEEVSVVFNGA  112 (152)
Q Consensus        93 ~~~~~~~~~-~~~~d~vi~~a  112 (152)
                          .+.++ +++++.++-+.
T Consensus        54 ----~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen   54 ----VLERAGIEKADAVVILT   70 (116)
T ss_dssp             ----HHHHTTGGCESEEEEES
T ss_pred             ----HHhhcCccccCEEEEcc
Confidence                35443 34778777554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.61  E-value=0.083  Score=39.51  Aligned_cols=38  Identities=21%  Similarity=0.254  Sum_probs=31.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      -+.+|++.|.| .|.||+++++.+...|   .+|+..+|++.
T Consensus       143 ~l~gktvGIiG-~GrIG~avA~r~~~Fg---m~v~y~~~~~~  180 (324)
T COG1052         143 DLRGKTLGIIG-LGRIGQAVARRLKGFG---MKVLYYDRSPN  180 (324)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhcCC---CEEEEECCCCC
Confidence            36799999999 9999999999998554   38888888764

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.60  E-value=0.053  Score=40.88  Aligned_cols=38  Identities=32%  Similarity=0.468  Sum_probs=28.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHh-hCCCCcEEEEeecC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLR-SCPDIGKVYILCRA   46 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~-~g~~~~~v~~~~r~   46 (152)
                      +..++.|.|+||++|..+++.|.+ ...++..+..++..
T Consensus         4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~   42 (347)
T PRK06728          4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK   42 (347)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence            346899999999999999999985 44555556555543

>PLN02928 oxidoreductase family protein

Probab=95.55  E-value=0.099  Score=39.48  Aligned_cols=36  Identities=25%  Similarity=0.314  Sum_probs=30.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+.++++.|.| .|.||+++++.+...|.   +|+..+|+
T Consensus       156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~---~V~~~dr~  191 (347)
T PLN02928        156 TLFGKTVFILG-YGAIGIELAKRLRPFGV---KLLATRRS  191 (347)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhhCCC---EEEEECCC
Confidence            36789999999 79999999999998875   77787775

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.55  E-value=0.029  Score=40.92  Aligned_cols=37  Identities=22%  Similarity=0.381  Sum_probs=31.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..+++++|+|+ |++|++++..|...|.  .+|+++.|+.
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~--~~V~v~~R~~  157 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGV--AEITIVNRTV  157 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence            56789999996 9999999999998863  5888888864

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.55  E-value=0.037  Score=42.02  Aligned_cols=36  Identities=19%  Similarity=0.361  Sum_probs=26.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~   46 (152)
                      +++.|.||||++|..+++.++++ ...+..+..++.+
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~   38 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS   38 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence            57899999999999999966554 4444456666554

>PRK06436 glycerate dehydrogenase; Provisional

Probab=95.50  E-value=0.12  Score=38.27  Aligned_cols=37  Identities=16%  Similarity=0.148  Sum_probs=30.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+.++++.|.| .|.||+++++.+...|.   +|++.+|+.
T Consensus       119 ~L~gktvgIiG-~G~IG~~vA~~l~afG~---~V~~~~r~~  155 (303)
T PRK06436        119 LLYNKSLGILG-YGGIGRRVALLAKAFGM---NIYAYTRSY  155 (303)
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCC---EEEEECCCC
Confidence            36789999999 79999999998777675   778888754

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.50  E-value=0.39  Score=35.52  Aligned_cols=104  Identities=12%  Similarity=0.112  Sum_probs=62.9

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      +.|.|+ |++|..++..|+..|. +..++++++++..  +.....++         ...... ........   ++    
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~-~~el~l~D~~~~~--~~g~~~DL---------~~~~~~-~~~~~i~~---~~----   59 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGL-ASELVLVDVNEEK--AKGDALDL---------SHASAF-LATGTIVR---GG----   59 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCccH--HHHHHHhH---------HHhccc-cCCCeEEE---CC----
Confidence            356785 7899999999988753 3478888875431  11111111         111110 01111111   11    


Q ss_pred             CChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         93 IKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        93 ~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                          + ...++++|+||.++|.... .++..+....|+.-...+.+...+.
T Consensus        60 ----~-~~~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~  105 (300)
T cd00300          60 ----D-YADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY  105 (300)
T ss_pred             ----C-HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                1 2356789999999997543 3456678888999888888888876

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.49  E-value=0.057  Score=40.34  Aligned_cols=38  Identities=34%  Similarity=0.425  Sum_probs=30.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++.|.|+||-+|+.+++.|.++.+.+..+.++...+
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~r   38 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASAR   38 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEeccc
Confidence            36889999999999999999999656776666665443

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.42  E-value=0.066  Score=39.35  Aligned_cols=37  Identities=22%  Similarity=0.307  Sum_probs=30.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+.+++++|.|. |.+|+.+++.|...|.   +|++..|+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~---~V~v~~R~~  184 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGA---RVFVGARSS  184 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence            357899999996 7799999999999875   678888753

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.42  E-value=0.15  Score=37.15  Aligned_cols=39  Identities=23%  Similarity=0.336  Sum_probs=31.9

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+...+|+|.| .|++|.++++.|++.|.  .++.+++.+.
T Consensus        26 ~kL~~s~VlVvG-~GGVGs~vae~Lar~GV--g~itLiD~D~   64 (268)
T PRK15116         26 QLFADAHICVVG-IGGVGSWAAEALARTGI--GAITLIDMDD   64 (268)
T ss_pred             HHhcCCCEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCCE
Confidence            456778999998 77899999999999875  5788887653

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.41  E-value=0.12  Score=34.71  Aligned_cols=34  Identities=32%  Similarity=0.435  Sum_probs=26.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      ++|++++|.|.+..+|+.++..|.++|.   .|..+.
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~a---tVt~~h   67 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGA---TVTICH   67 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT----EEEEE-
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCC---eEEecc
Confidence            6899999999999999999999999974   554443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.39  E-value=0.3  Score=36.07  Aligned_cols=104  Identities=16%  Similarity=0.093  Sum_probs=59.0

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      |.|.|+ |.+|..++..++..|..  .|+++++++.... .+.+ ++.         ...........+.   .+.    
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~-g~~~-dl~---------~~~~~~~~~~~I~---~t~----   59 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQ-GKAL-DIS---------QAAPILGSDTKVT---GTN----   59 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHH-HHHH-HHH---------HhhhhcCCCeEEE---EcC----
Confidence            457887 99999999998887643  7888888643110 0111 110         0000000111111   111    


Q ss_pred             CChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         93 IKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        93 ~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                          +.. .++++|+||.+++.... ..+..+.+..|+.....+++...+.
T Consensus        60 ----d~~-~l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~  105 (300)
T cd01339          60 ----DYE-DIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY  105 (300)
T ss_pred             ----CHH-HhCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                122 35889999999986543 2333446667787777777777665

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PLN02306 hydroxypyruvate reductase

Probab=95.36  E-value=0.21  Score=38.28  Aligned_cols=36  Identities=17%  Similarity=0.181  Sum_probs=29.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHH-hhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~-~~g~~~~~v~~~~r~~   47 (152)
                      +.++++.|.| .|.||+++++.+. ..|.   +|++.++..
T Consensus       163 L~gktvGIiG-~G~IG~~vA~~l~~~fGm---~V~~~d~~~  199 (386)
T PLN02306        163 LKGQTVGVIG-AGRIGSAYARMMVEGFKM---NLIYYDLYQ  199 (386)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcCCC---EEEEECCCC
Confidence            6789999999 8999999999985 5553   778887654

>PRK06153 hypothetical protein; Provisional

Probab=95.28  E-value=0.044  Score=41.81  Aligned_cols=40  Identities=13%  Similarity=0.253  Sum_probs=33.4

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.+++.+|+|.| .|++|++++..|++.|.  .++.+++.+.
T Consensus       171 q~kL~~~~VaIVG-~GG~GS~Va~~LAR~GV--geI~LVD~D~  210 (393)
T PRK06153        171 SAKLEGQRIAIIG-LGGTGSYILDLVAKTPV--REIHLFDGDD  210 (393)
T ss_pred             HHHHhhCcEEEEc-CCccHHHHHHHHHHcCC--CEEEEECCCE
Confidence            4567888999999 78899999999999864  7888887653

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.28  E-value=0.036  Score=38.94  Aligned_cols=34  Identities=35%  Similarity=0.390  Sum_probs=28.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |+|.|.||+|.+|..++..|.+.|+   .|.+.+|++
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~---~V~v~~r~~   34 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGN---KIIIGSRDL   34 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCC---EEEEEEcCH
Confidence            4789999999999999999999986   556667754

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=95.23  E-value=0.15  Score=38.13  Aligned_cols=36  Identities=14%  Similarity=0.220  Sum_probs=28.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHH-hhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~-~~g~~~~~v~~~~r~~   47 (152)
                      +.++++.|.| .|.||+++++.+. ..|  . +|+..+|..
T Consensus       143 L~gktvGIiG-~G~IG~~va~~l~~~fg--m-~V~~~~~~~  179 (323)
T PRK15409        143 VHHKTLGIVG-MGRIGMALAQRAHFGFN--M-PILYNARRH  179 (323)
T ss_pred             CCCCEEEEEc-ccHHHHHHHHHHHhcCC--C-EEEEECCCC
Confidence            6889999999 7999999999986 555  3 667776653

>PLN00203 glutamyl-tRNA reductase

Probab=95.18  E-value=0.1  Score=41.56  Aligned_cols=37  Identities=35%  Similarity=0.516  Sum_probs=31.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++++|.|+ |.+|..+++.|...|.  ..|+++.|+.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~--~~V~V~nRs~  300 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGC--TKMVVVNRSE  300 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCC--CeEEEEeCCH
Confidence            66899999997 9999999999998864  5788888863

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=95.17  E-value=0.21  Score=38.17  Aligned_cols=87  Identities=16%  Similarity=0.215  Sum_probs=51.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH---HHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP---KARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..++.......   ...+.++.+              ..++.++.+
T Consensus       114 L~gktvGIIG-~G~IG~~vA~~l~a~G~---~V~~~dp~~~~~~~~~~~~~L~ell~--------------~sDiI~lh~  175 (378)
T PRK15438        114 LHDRTVGIVG-VGNVGRRLQARLEALGI---KTLLCDPPRADRGDEGDFRSLDELVQ--------------EADILTFHT  175 (378)
T ss_pred             cCCCEEEEEC-cCHHHHHHHHHHHHCCC---EEEEECCcccccccccccCCHHHHHh--------------hCCEEEEeC
Confidence            6789999999 79999999999998885   66666653221100   011222221              156777667


Q ss_pred             ccCCC----CCCCChhHHHHHhccccEEEecc
Q psy11862         85 DILQA----NLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        85 D~~~~----~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .+++.    ..++-.++..+.+++--++||.+
T Consensus       176 PLt~~g~~~T~~li~~~~l~~mk~gailIN~a  207 (378)
T PRK15438        176 PLFKDGPYKTLHLADEKLIRSLKPGAILINAC  207 (378)
T ss_pred             CCCCCcccccccccCHHHHhcCCCCcEEEECC
Confidence            76663    33333333444445445666654

>PRK07574 formate dehydrogenase; Provisional

Probab=95.08  E-value=0.091  Score=40.25  Aligned_cols=36  Identities=25%  Similarity=0.302  Sum_probs=30.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++++.|.| .|.||+.+++.|...|.   +|+..+|..
T Consensus       190 L~gktVGIvG-~G~IG~~vA~~l~~fG~---~V~~~dr~~  225 (385)
T PRK07574        190 LEGMTVGIVG-AGRIGLAVLRRLKPFDV---KLHYTDRHR  225 (385)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEECCCC
Confidence            6789999999 68999999999998875   778888764

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.07  E-value=0.21  Score=38.57  Aligned_cols=36  Identities=19%  Similarity=0.238  Sum_probs=30.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..++..
T Consensus       149 L~gktvGIiG-~G~IG~~vA~~~~~fGm---~V~~~d~~~  184 (409)
T PRK11790        149 VRGKTLGIVG-YGHIGTQLSVLAESLGM---RVYFYDIED  184 (409)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEECCCc
Confidence            6889999999 79999999999988875   778887653

>PRK07877 hypothetical protein; Provisional

Probab=95.04  E-value=0.093  Score=43.38  Aligned_cols=97  Identities=10%  Similarity=0.110  Sum_probs=57.5

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH----HHHhcC---hhhhhhhhhccccCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL----AEFSKL---PVFERLRKECPAQLS   77 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~   77 (152)
                      ++.++..+|+|.|. | +|.+++..|+..|- +.++.+++.+....+-.++.    ..+...   ..-+.+....  ..-
T Consensus       102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~in--p~i  176 (722)
T PRK07877        102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELD--PYL  176 (722)
T ss_pred             HHHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHC--CCC
Confidence            45678889999999 6 99999999999862 25788877664332222221    000000   0001111111  124


Q ss_pred             cEEEEEcccCCCCCCCChhHHHHHhccccEEEeccc
Q psy11862         78 RLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA  113 (152)
Q Consensus        78 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~  113 (152)
                      +++.+...++.       +++..+++++|+|+.|.-
T Consensus       177 ~v~~~~~~i~~-------~n~~~~l~~~DlVvD~~D  205 (722)
T PRK07877        177 PVEVFTDGLTE-------DNVDAFLDGLDVVVEECD  205 (722)
T ss_pred             EEEEEeccCCH-------HHHHHHhcCCCEEEECCC
Confidence            55666666653       358888899999998853

>PRK04148 hypothetical protein; Provisional

Probab=95.04  E-value=0.3  Score=31.71  Aligned_cols=69  Identities=14%  Similarity=0.190  Sum_probs=46.8

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +++++++.|.+  -|.+++..|.+.|+   .|.+++.++.      .+.....               ..+.++.+|+.+
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~---~ViaIDi~~~------aV~~a~~---------------~~~~~v~dDlf~   69 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGF---DVIVIDINEK------AVEKAKK---------------LGLNAFVDDLFN   69 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH---------------hCCeEEECcCCC
Confidence            45789999954  68888999999886   6778776533      1222111               346788999999


Q ss_pred             CCCCCChhHHHHHhccccEEEec
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNG  111 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~  111 (152)
                      +.        .++.+++|.|+..
T Consensus        70 p~--------~~~y~~a~liysi   84 (134)
T PRK04148         70 PN--------LEIYKNAKLIYSI   84 (134)
T ss_pred             CC--------HHHHhcCCEEEEe
Confidence            86        3445677777653

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=94.98  E-value=0.23  Score=40.50  Aligned_cols=39  Identities=21%  Similarity=0.256  Sum_probs=31.7

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++..+|+|.| .|++|.++++.|+..|.  .++.+++...
T Consensus       334 ekL~~~kVLIvG-aGGLGs~VA~~La~~GV--g~ItlVD~D~  372 (664)
T TIGR01381       334 ERYSQLKVLLLG-AGTLGCNVARCLIGWGV--RHITFVDNGK  372 (664)
T ss_pred             HHHhcCeEEEEC-CcHHHHHHHHHHHHcCC--CeEEEEcCCE
Confidence            456788999998 67899999999999754  7888887653

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.97  E-value=0.23  Score=35.39  Aligned_cols=33  Identities=27%  Similarity=0.360  Sum_probs=27.2

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++|.| .|++|.++++.|+..|.  .++.+++.+.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gv--g~i~ivD~D~   33 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGF--GQIHVIDMDT   33 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCCE
Confidence            467777 78999999999999876  6888888764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=94.94  E-value=0.047  Score=43.55  Aligned_cols=35  Identities=31%  Similarity=0.361  Sum_probs=30.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +++++++|+|+ |++|++++..|.+.|.   +|+++.|+
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~---~V~i~nR~  411 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGA---RVVIANRT  411 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEcCC
Confidence            56789999998 7999999999999975   67777774

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.80  E-value=0.17  Score=37.70  Aligned_cols=36  Identities=14%  Similarity=0.192  Sum_probs=30.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++++.|.| .|.||+.+++.|...|.   +|++.+|..
T Consensus       134 l~g~tvgIvG-~G~IG~~vA~~l~afG~---~V~~~~~~~  169 (312)
T PRK15469        134 REDFTIGILG-AGVLGSKVAQSLQTWGF---PLRCWSRSR  169 (312)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEeCCC
Confidence            5789999998 89999999999998885   667777654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.77  E-value=0.2  Score=38.90  Aligned_cols=75  Identities=21%  Similarity=0.255  Sum_probs=47.8

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ..++++|.|+ |.+|..+++.|.+.|+   .++++++++.      .+..+...             ..++.++.+|.++
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~---~v~vid~~~~------~~~~~~~~-------------~~~~~~i~gd~~~  286 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGY---SVKLIERDPE------RAEELAEE-------------LPNTLVLHGDGTD  286 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHH------HHHHHHHH-------------CCCCeEEECCCCC
Confidence            4678999996 9999999999999876   5566665422      22222110             1356678888877


Q ss_pred             CCCCCChhHHH-HHhccccEEEecc
Q psy11862         89 ANLGIKDSDLL-MLQEEVSVVFNGA  112 (152)
Q Consensus        89 ~~~~~~~~~~~-~~~~~~d~vi~~a  112 (152)
                      ++      .+. .-+.++|.+|-+.
T Consensus       287 ~~------~L~~~~~~~a~~vi~~~  305 (453)
T PRK09496        287 QE------LLEEEGIDEADAFIALT  305 (453)
T ss_pred             HH------HHHhcCCccCCEEEECC
Confidence            54      343 2234677776543

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.72  E-value=0.047  Score=40.61  Aligned_cols=35  Identities=20%  Similarity=0.171  Sum_probs=30.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .++.| |+||-+|+.+.+.|.+++..+..++++...
T Consensus         4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~   38 (322)
T PRK06901          4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE   38 (322)
T ss_pred             ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence            47889 999999999999999988888888877653

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=94.71  E-value=0.27  Score=34.05  Aligned_cols=34  Identities=18%  Similarity=0.349  Sum_probs=29.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      ++|++++|.|.+.-+|+.++..|+++|.   .|..+.
T Consensus        60 l~GK~vvVIGrS~iVGkPla~lL~~~~A---tVti~~   93 (197)
T cd01079          60 LYGKTITIINRSEVVGRPLAALLANDGA---RVYSVD   93 (197)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCC---EEEEEe
Confidence            7899999999999999999999999874   566553

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK06849 hypothetical protein; Provisional

Probab=94.60  E-value=0.079  Score=40.46  Aligned_cols=36  Identities=19%  Similarity=0.174  Sum_probs=30.7

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.|+|||||+...+|..+++.|.+.|+   +|++++..+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~---~Vi~~d~~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH---TVILADSLK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence            468999999999999999999999987   667776543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.59  E-value=0.086  Score=36.63  Aligned_cols=37  Identities=30%  Similarity=0.334  Sum_probs=30.4

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ..+++++++|+|. |.+|+++++.|.+.|+   +|+..+++
T Consensus        24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~---~Vvv~D~~   60 (200)
T cd01075          24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGA---KLIVADIN   60 (200)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEcCC
Confidence            3578899999996 5899999999999986   56666654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN03139 formate dehydrogenase; Provisional

Probab=94.58  E-value=0.16  Score=38.90  Aligned_cols=37  Identities=27%  Similarity=0.344  Sum_probs=30.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      -+.++++.|.| .|.||+.+++.|...|.   +|+..+|..
T Consensus       196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~---~V~~~d~~~  232 (386)
T PLN03139        196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNC---NLLYHDRLK  232 (386)
T ss_pred             CCCCCEEEEEe-ecHHHHHHHHHHHHCCC---EEEEECCCC
Confidence            36889999999 79999999999998875   667777753

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=94.55  E-value=0.37  Score=35.55  Aligned_cols=88  Identities=15%  Similarity=0.136  Sum_probs=49.5

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CH-------HHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TP-------KARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      +|+|.| .|++|.++++.|+..|.  .++.+++.+.... ++       .+.+...+.....+.+....+  ..++..+.
T Consensus         1 kVlVVG-aGGlG~eilknLal~Gv--g~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np--~v~I~~~~   75 (291)
T cd01488           1 KILVIG-AGGLGCELLKNLALSGF--RNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVP--GVNVTPHF   75 (291)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCC--CCEEEEEe
Confidence            477887 78899999999999875  6888877543221 11       111111111111112222111  24566666


Q ss_pred             cccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         84 GDILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .++.+.        -...+++.|+||.+.
T Consensus        76 ~~i~~~--------~~~f~~~fdvVi~al   96 (291)
T cd01488          76 GKIQDK--------DEEFYRQFNIIICGL   96 (291)
T ss_pred             cccCch--------hHHHhcCCCEEEECC
Confidence            666542        245667889998764

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.51  E-value=0.18  Score=37.34  Aligned_cols=36  Identities=22%  Similarity=0.396  Sum_probs=30.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.|+++.|.|.++.+|+.++..|++.|+   .|.++.|.
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~~ga---tVtv~~~~  192 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQAHC---SVTVVHSR  192 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEECCC
Confidence            6899999999999999999999999986   56666543

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=94.49  E-value=0.12  Score=39.18  Aligned_cols=37  Identities=19%  Similarity=0.335  Sum_probs=29.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHH-hhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~-~~g~~~~~v~~~~r~~   47 (152)
                      +++.|.|+||-+|+.+++.|. +....+..++.++.+.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~   38 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQ   38 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchh
Confidence            368899999999999999998 5566656677776543

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=94.47  E-value=0.039  Score=40.72  Aligned_cols=36  Identities=31%  Similarity=0.292  Sum_probs=30.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++++|.|. |.+|+.++..|...|.   +|.+++|+.
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga---~V~v~~r~~  185 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGA---NVTVGARKS  185 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECCH
Confidence            46899999995 7799999999998874   778888763

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.44  E-value=0.35  Score=37.88  Aligned_cols=40  Identities=20%  Similarity=0.301  Sum_probs=31.3

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +..++.+++++|.| .|..|.++++.|.+.|+   .|...++++
T Consensus         8 ~~~~~~~~~i~v~G-~G~sG~a~a~~L~~~G~---~V~~~D~~~   47 (458)
T PRK01710          8 FKKFIKNKKVAVVG-IGVSNIPLIKFLVKLGA---KVTAFDKKS   47 (458)
T ss_pred             HhhhhcCCeEEEEc-ccHHHHHHHHHHHHCCC---EEEEECCCC
Confidence            34566788999988 67789999999999997   567777654

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=94.43  E-value=0.13  Score=39.88  Aligned_cols=37  Identities=30%  Similarity=0.478  Sum_probs=30.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++++|.|+ |.+|..+++.|...|.  ..|++..|+.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~--~~V~v~~r~~  216 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGV--RKITVANRTL  216 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence            57789999985 9999999999988764  5778888753

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.41  E-value=0.38  Score=32.29  Aligned_cols=35  Identities=29%  Similarity=0.323  Sum_probs=25.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .+.+|+++|+| -|.+|+.+++.|...|.   +|.+...
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga---~V~V~e~   54 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGA---RVTVTEI   54 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT----EEEEE-S
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCC---EEEEEEC
Confidence            46889999998 89999999999999984   6666655

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=94.32  E-value=0.59  Score=34.66  Aligned_cols=32  Identities=19%  Similarity=0.241  Sum_probs=25.7

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +|+|.| .|++|.++++.|+..|.  .++.+++.+
T Consensus         1 kVLIvG-aGGLGs~vA~~La~aGV--g~ItlvD~D   32 (307)
T cd01486           1 KCLLLG-AGTLGCNVARNLLGWGV--RHITFVDSG   32 (307)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCC
Confidence            477877 67899999999998764  688887754

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=94.27  E-value=0.15  Score=39.48  Aligned_cols=38  Identities=34%  Similarity=0.555  Sum_probs=31.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+.+++++|.|+ |.+|..+++.|...|.  ..|++..|+.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~--~~V~v~~rs~  214 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGV--GKILIANRTY  214 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence            367889999995 9999999999988763  5788888754

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00518 alaDH alanine dehydrogenase

Probab=94.25  E-value=0.36  Score=36.81  Aligned_cols=35  Identities=23%  Similarity=0.188  Sum_probs=28.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +...+++|.|+ |.+|...++.+...|.   +|.+++|+
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa---~V~v~d~~  199 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGA---TVTILDIN  199 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCC---eEEEEECC
Confidence            34567999985 8899999999999874   57777775

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.23  E-value=0.24  Score=36.59  Aligned_cols=36  Identities=28%  Similarity=0.447  Sum_probs=30.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~   46 (152)
                      ++|++++|.|.++.+|+.++..|++.|+   .|.++ .|+
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~---tVtv~~~rT  192 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLAANA---TVTIAHSRT  192 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhCCC---EEEEECCCC
Confidence            6899999999999999999999999986   55555 354

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=93.99  E-value=0.2  Score=37.26  Aligned_cols=37  Identities=30%  Similarity=0.433  Sum_probs=29.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++++|.|+ |.+|..+++.|...|.  ..|++.+|+.
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~--~~V~v~~r~~  212 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGV--AEITIANRTY  212 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence            56899999986 9999999999988653  5788888753

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>KOG4022|consensus

Probab=93.98  E-value=1.3  Score=30.06  Aligned_cols=33  Identities=21%  Similarity=0.255  Sum_probs=27.0

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEE
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVY   41 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~   41 (152)
                      ...+++|-||-|.+|++++..+...+|-|..|.
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siD   34 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSID   34 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEe
Confidence            346899999999999999999999988544333

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=93.97  E-value=0.44  Score=38.11  Aligned_cols=36  Identities=17%  Similarity=0.137  Sum_probs=30.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+.++|..
T Consensus       138 l~gktvgIiG-~G~IG~~vA~~l~~fG~---~V~~~d~~~  173 (526)
T PRK13581        138 LYGKTLGIIG-LGRIGSEVAKRAKAFGM---KVIAYDPYI  173 (526)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEECCCC
Confidence            6789999999 68999999999998875   778887753

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.94  E-value=0.3  Score=36.04  Aligned_cols=27  Identities=19%  Similarity=0.489  Sum_probs=25.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSC   34 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g   34 (152)
                      +.|++++|.|.+..+|+.++..|.++|
T Consensus       155 l~GK~vvViGrS~iVGkPla~lL~~~~  181 (293)
T PRK14185        155 TSGKKCVVLGRSNIVGKPMAQLMMQKA  181 (293)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHcCC
Confidence            689999999999999999999999874

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=93.93  E-value=0.59  Score=35.84  Aligned_cols=36  Identities=28%  Similarity=0.186  Sum_probs=29.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|++.++.
T Consensus       113 ~l~gktvGIIG-~G~IG~~va~~l~a~G~---~V~~~Dp~  148 (381)
T PRK00257        113 DLAERTYGVVG-AGHVGGRLVRVLRGLGW---KVLVCDPP  148 (381)
T ss_pred             CcCcCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEECCc
Confidence            36789999999 78899999999998886   66776653

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=93.90  E-value=0.13  Score=37.38  Aligned_cols=35  Identities=26%  Similarity=0.323  Sum_probs=29.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++++|+|+ |++|++++..|.+.|.   .|.+..|+.
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~---~v~v~~R~~  150 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADC---NVIIANRTV  150 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence            4789999997 7999999999998874   677777753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=93.88  E-value=0.42  Score=38.19  Aligned_cols=35  Identities=20%  Similarity=0.218  Sum_probs=30.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.++++.|.| .|.||+.+++.|...|.   +|+..++.
T Consensus       136 l~gktvgIiG-~G~IG~~vA~~l~~fG~---~V~~~d~~  170 (525)
T TIGR01327       136 LYGKTLGVIG-LGRIGSIVAKRAKAFGM---KVLAYDPY  170 (525)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEECCC
Confidence            6789999999 79999999999998875   67777764

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.73  E-value=0.37  Score=35.42  Aligned_cols=28  Identities=21%  Similarity=0.455  Sum_probs=25.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      +.|++++|.|.+..+|+.++..|.++|.
T Consensus       162 l~Gk~vvViGrs~iVGkPla~lL~~~~a  189 (287)
T PRK14176        162 IEGKNAVIVGHSNVVGKPMAAMLLNRNA  189 (287)
T ss_pred             CCCCEEEEECCCcccHHHHHHHHHHCCC
Confidence            6899999999999999999999998874

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=93.72  E-value=0.14  Score=35.78  Aligned_cols=34  Identities=24%  Similarity=0.230  Sum_probs=25.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +|++.| ||+|.+|..++++|.+.|+   .|++.+|+.
T Consensus         1 m~~~~i-~GtGniG~alA~~~a~ag~---eV~igs~r~   34 (211)
T COG2085           1 MMIIAI-IGTGNIGSALALRLAKAGH---EVIIGSSRG   34 (211)
T ss_pred             CcEEEE-eccChHHHHHHHHHHhCCC---eEEEecCCC
Confidence            355665 6699999999999999997   445554443

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.69  E-value=0.12  Score=40.31  Aligned_cols=34  Identities=26%  Similarity=0.305  Sum_probs=28.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |++.|.||.|.+|..+++.|.+.|+   .|.+.+|++
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~---~V~v~~r~~   34 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGF---EVIVTGRDP   34 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCC---EEEEEECCh
Confidence            4789999999999999999999886   567777754

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=93.68  E-value=0.39  Score=38.89  Aligned_cols=89  Identities=16%  Similarity=0.136  Sum_probs=54.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ..+..+|+|.| .|+.|.+++..|+..|.  ..+.+++-+.. .+...++.++.+.      .   ....+.+.+...|.
T Consensus       126 ~qR~akVlVlG-~Gg~~s~lv~sL~~sG~--~~I~~vd~D~v-~SNlnRIgEl~e~------A---~~~n~~v~v~~i~~  192 (637)
T TIGR03693       126 LSRNAKILAAG-SGDFLTKLVRSLIDSGF--PRFHAIVTDAE-EHALDRIHELAEI------A---EETDDALLVQEIDF  192 (637)
T ss_pred             hhhcccEEEEe-cCchHHHHHHHHHhcCC--CcEEEEecccc-chhhhHHHHHHHH------H---HHhCCCCceEeccC
Confidence            34567899999 67779999999999987  46666644333 2223333332110      0   01124454444554


Q ss_pred             CCCCCCCChhHHHHHhccccEEEecccc
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAAS  114 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~  114 (152)
                      ++.      +++...+++.|.|++.+.-
T Consensus       193 ~~~------~dl~ev~~~~DiVi~vsDd  214 (637)
T TIGR03693       193 AED------QHLHEAFEPADWVLYVSDN  214 (637)
T ss_pred             Ccc------hhHHHhhcCCcEEEEECCC
Confidence            433      3689999999999998753

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.60  E-value=0.77  Score=35.75  Aligned_cols=37  Identities=19%  Similarity=0.284  Sum_probs=29.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +.+++++|+|. |++|.++++.|.+.|+   .|.+.+..+.
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~---~v~~~d~~~~   39 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGA---EVAAYDAELK   39 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCCC
Confidence            45789999996 5899999999999986   5666665443

>KOG2013|consensus

Probab=93.59  E-value=0.33  Score=38.13  Aligned_cols=38  Identities=24%  Similarity=0.239  Sum_probs=30.6

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +..++.+||+.| .||||-++.+.|+..|.  ..|++++-+
T Consensus         8 eai~~~riLvVG-aGGIGCELLKnLal~gf--~~IhiIDlD   45 (603)
T KOG2013|consen    8 EAIKSGRILVVG-AGGIGCELLKNLALTGF--EEIHIIDLD   45 (603)
T ss_pred             HHhccCeEEEEe-cCcccHHHHHHHHHhcC--CeeEEEecc
Confidence            345678999999 67899999999999877  578777754

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.57  E-value=0.36  Score=35.50  Aligned_cols=28  Identities=39%  Similarity=0.587  Sum_probs=25.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      ++|++++|.|.+..+|+.++..|.+++.
T Consensus       153 l~Gk~vvViGrS~iVGkPla~lL~~~~a  180 (287)
T PRK14173        153 LAGKEVVVVGRSNIVGKPLAALLLREDA  180 (287)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCC
Confidence            6899999999999999999999998864

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.57  E-value=0.37  Score=35.40  Aligned_cols=26  Identities=31%  Similarity=0.322  Sum_probs=24.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhh
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRS   33 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~   33 (152)
                      +.|++++|.|.+..+|+.++..|.+.
T Consensus       156 l~Gk~vvViGrS~~VGkPla~lL~~~  181 (284)
T PRK14193        156 LAGAHVVVIGRGVTVGRPIGLLLTRR  181 (284)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHhhc
Confidence            57999999999999999999999883

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.52  E-value=0.18  Score=39.12  Aligned_cols=36  Identities=28%  Similarity=0.317  Sum_probs=30.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++++|+| .|.+|+.++..+...|.   +|++.++++
T Consensus       210 l~Gk~VlViG-~G~IG~~vA~~lr~~Ga---~ViV~d~dp  245 (425)
T PRK05476        210 IAGKVVVVAG-YGDVGKGCAQRLRGLGA---RVIVTEVDP  245 (425)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEEcCCc
Confidence            5789999999 58999999999998875   677777654

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=93.51  E-value=0.25  Score=29.28  Aligned_cols=35  Identities=31%  Similarity=0.407  Sum_probs=29.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      +.+++++|.|. |..|..++..|.+.+.  .++++.+|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~--~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGG--KKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcC
Confidence            67889999997 9999999999999842  47777766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.49  E-value=0.38  Score=35.57  Aligned_cols=28  Identities=32%  Similarity=0.432  Sum_probs=25.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      ++|++++|.|.+..+|+.++..|.++|.
T Consensus       156 l~Gk~vvVIGrS~iVGkPla~lL~~~~a  183 (297)
T PRK14186        156 IAGKKAVVVGRSILVGKPLALMLLAANA  183 (297)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCC
Confidence            6899999999999999999999998864

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.47  E-value=0.47  Score=34.86  Aligned_cols=34  Identities=21%  Similarity=0.280  Sum_probs=28.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      +.|++++|.|.+..+|+.++..|.++|.   .|..+.
T Consensus       157 l~Gk~vvViGrs~iVG~Pla~lL~~~~a---tVtv~h  190 (285)
T PRK10792        157 TYGLNAVVVGASNIVGRPMSLELLLAGC---TVTVCH  190 (285)
T ss_pred             CCCCEEEEECCCcccHHHHHHHHHHCCC---eEEEEE
Confidence            6799999999999999999999998864   444443

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.47  E-value=0.28  Score=36.85  Aligned_cols=37  Identities=14%  Similarity=0.034  Sum_probs=31.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      -+.++++.|.| .|.+|+.+++.|...|.   +|++.+|+.
T Consensus       143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~---~V~~~d~~~  179 (330)
T PRK12480        143 PVKNMTVAIIG-TGRIGAATAKIYAGFGA---TITAYDAYP  179 (330)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEEeCCh
Confidence            36788999998 78999999999998885   677888764

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=93.43  E-value=0.59  Score=30.63  Aligned_cols=36  Identities=33%  Similarity=0.422  Sum_probs=30.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .++|++++|.|.+.-+|..++..|.++|.   .|..+.+
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~ga---tV~~~~~   60 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGA---TVYSCDW   60 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEeCC
Confidence            36899999999999999999999999874   5555543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.36  E-value=0.42  Score=35.08  Aligned_cols=28  Identities=21%  Similarity=0.453  Sum_probs=25.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      ++|++++|.|.+..+|+.++..|.++|.
T Consensus       154 l~Gk~vvViGrS~iVGkPla~lL~~~~a  181 (282)
T PRK14169        154 VAGKRVVIVGRSNIVGRPLAGLMVNHDA  181 (282)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCC
Confidence            6899999999999999999999998864

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.35  E-value=0.43  Score=35.02  Aligned_cols=29  Identities=24%  Similarity=0.334  Sum_probs=26.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      .++|++++|.|.+..+|+.++..|.+++.
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~A  183 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKA  183 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCC
Confidence            36799999999999999999999998864

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.28  E-value=0.42  Score=35.12  Aligned_cols=28  Identities=25%  Similarity=0.458  Sum_probs=25.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      +.|++++|.|.+..+|+.++..|.+++.
T Consensus       155 l~Gk~vvVvGrS~iVGkPla~lL~~~~a  182 (284)
T PRK14170        155 IEGKRAVVIGRSNIVGKPVAQLLLNENA  182 (284)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCC
Confidence            6899999999999999999999998864

>PRK08605 D-lactate dehydrogenase; Validated

Probab=93.25  E-value=1.1  Score=33.60  Aligned_cols=38  Identities=18%  Similarity=0.086  Sum_probs=28.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+.++++.|.| .|.+|+++++.|.+ +.++ +|+..+++.
T Consensus       143 ~l~g~~VgIIG-~G~IG~~vA~~L~~-~~g~-~V~~~d~~~  180 (332)
T PRK08605        143 SIKDLKVAVIG-TGRIGLAVAKIFAK-GYGS-DVVAYDPFP  180 (332)
T ss_pred             eeCCCEEEEEC-CCHHHHHHHHHHHh-cCCC-EEEEECCCc
Confidence            36789999999 78999999999954 2333 677777654

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=93.21  E-value=0.15  Score=38.84  Aligned_cols=36  Identities=31%  Similarity=0.445  Sum_probs=30.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..+++.|.||.|.+|..+++.|.+.|+   .|.+.+|+.
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~---~V~~~d~~~  132 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGY---QVRILEQDD  132 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCC---eEEEeCCCc
Confidence            347899999999999999999999987   566777653

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.17  E-value=0.51  Score=34.69  Aligned_cols=28  Identities=25%  Similarity=0.491  Sum_probs=26.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      +.|++++|.|.+..+|+.++..|.++|.
T Consensus       155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gA  182 (285)
T PRK14191        155 IKGKDVVIIGASNIVGKPLAMLMLNAGA  182 (285)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC
Confidence            6799999999999999999999999875

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.15  E-value=0.53  Score=34.60  Aligned_cols=29  Identities=21%  Similarity=0.287  Sum_probs=26.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      .+.|++++|.|.+..+|+.++..|.+++.
T Consensus       156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~a  184 (284)
T PRK14177        156 DVTGKNAVVVGRSPILGKPMAMLLTEMNA  184 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCC
Confidence            36899999999999999999999998864

>PRK06444 prephenate dehydrogenase; Provisional

Probab=93.13  E-value=0.088  Score=36.53  Aligned_cols=27  Identities=22%  Similarity=0.314  Sum_probs=24.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDI   37 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~   37 (152)
                      +++.|.||+|.+|+.+++.|.+.|+.|
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v   27 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGV   27 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEE
Confidence            478999999999999999999988854

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=93.12  E-value=0.62  Score=33.07  Aligned_cols=38  Identities=21%  Similarity=0.413  Sum_probs=28.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~   46 (152)
                      |+.+++.|.| +|.+|.+++..|.+.+ .++..+++..|+
T Consensus         2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~   40 (245)
T PRK07634          2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRS   40 (245)
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCC
Confidence            3467899998 6899999999998875 334346666653

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=93.11  E-value=0.75  Score=32.10  Aligned_cols=34  Identities=26%  Similarity=0.415  Sum_probs=27.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      +++++++|.| +|.+|..-++.|++.|.   .|.+++.
T Consensus         7 l~gk~vlVvG-gG~va~rk~~~Ll~~ga---~VtVvsp   40 (205)
T TIGR01470         7 LEGRAVLVVG-GGDVALRKARLLLKAGA---QLRVIAE   40 (205)
T ss_pred             cCCCeEEEEC-cCHHHHHHHHHHHHCCC---EEEEEcC
Confidence            7889999999 67889999999999985   5555554

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.09  E-value=0.51  Score=34.68  Aligned_cols=33  Identities=27%  Similarity=0.390  Sum_probs=28.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL   43 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~   43 (152)
                      +.|++++|.|.++.+|+.++..|.++|.   .|..+
T Consensus       156 l~Gk~vvViGrs~iVGkPla~lL~~~~a---tVt~~  188 (285)
T PRK14189        156 LRGAHAVVIGRSNIVGKPMAMLLLQAGA---TVTIC  188 (285)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEe
Confidence            5899999999999999999999999874   55443

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.09  E-value=0.42  Score=35.14  Aligned_cols=29  Identities=24%  Similarity=0.454  Sum_probs=26.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPD   36 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~   36 (152)
                      +.|+++.|.|.+|.+|+.++..|++.|+.
T Consensus       156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gat  184 (284)
T PRK14179        156 LEGKHAVVIGRSNIVGKPMAQLLLDKNAT  184 (284)
T ss_pred             CCCCEEEEECCCCcCcHHHHHHHHHCCCE
Confidence            68999999999999999999999999863

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=93.00  E-value=0.38  Score=27.93  Aligned_cols=34  Identities=35%  Similarity=0.475  Sum_probs=27.0

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG   49 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~   49 (152)
                      +++|.| +|++|.+++..|.+.|.   +|.++.|++..
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g~---~vtli~~~~~~   34 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELGK---EVTLIERSDRL   34 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTTS---EEEEEESSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhCc---EEEEEeccchh
Confidence            356666 89999999999999874   77888887643

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=92.97  E-value=0.24  Score=31.97  Aligned_cols=47  Identities=19%  Similarity=0.219  Sum_probs=32.4

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHh
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS   60 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~   60 (152)
                      +.|.|+||.||...+.-+.+...+ -+|+.++-..+.+.+.+...++.
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~-f~v~~Lsa~~n~~~L~~q~~~f~   47 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDK-FEVVALSAGSNIEKLAEQAREFK   47 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTT-EEEEEEEESSTHHHHHHHHHHHT
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCc-eEEEEEEcCCCHHHHHHHHHHhC
Confidence            578999999999988888887433 47777775444344444445543

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=92.96  E-value=0.17  Score=38.08  Aligned_cols=31  Identities=23%  Similarity=0.350  Sum_probs=24.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL   43 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~   43 (152)
                      +++.|+|++|++|.++++.|.++. .+ .+..+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~-~~-~l~~v   31 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHP-YF-ELAKV   31 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-Cc-eEEEE
Confidence            378999999999999999887763 34 44444

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.92  E-value=0.61  Score=34.16  Aligned_cols=28  Identities=29%  Similarity=0.502  Sum_probs=25.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      ++|++++|.|.+..+|+.++..|.++|.
T Consensus       156 l~Gk~vvViGrS~~VGkPla~lL~~~~A  183 (278)
T PRK14172        156 IEGKEVVVIGRSNIVGKPVAQLLLNENA  183 (278)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCC
Confidence            6899999999999999999999998864

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=92.89  E-value=0.51  Score=37.95  Aligned_cols=70  Identities=17%  Similarity=0.281  Sum_probs=46.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ..++|.| .|.+|+++++.|.++|+   .+++++++      .++.++...               .+...+.+|.++++
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~---~vvvId~d------~~~~~~~~~---------------~g~~~i~GD~~~~~  472 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGI---PLVVIETS------RTRVDELRE---------------RGIRAVLGNAANEE  472 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCC---CEEEEECC------HHHHHHHHH---------------CCCeEEEcCCCCHH
Confidence            3677877 78899999999999986   45666653      223333321               46778899998865


Q ss_pred             CCCChhHHHHH-hccccEEEec
Q psy11862         91 LGIKDSDLLML-QEEVSVVFNG  111 (152)
Q Consensus        91 ~~~~~~~~~~~-~~~~d~vi~~  111 (152)
                            .+++. ++++|.++-+
T Consensus       473 ------~L~~a~i~~a~~viv~  488 (558)
T PRK10669        473 ------IMQLAHLDCARWLLLT  488 (558)
T ss_pred             ------HHHhcCccccCEEEEE
Confidence                  23332 3467766643

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=92.88  E-value=0.48  Score=36.06  Aligned_cols=35  Identities=23%  Similarity=0.283  Sum_probs=28.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +++++|.|+ |.+|+.++.+..+.|+   ++++++.++.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~---~v~~~d~~~~   36 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGY---KVIVLDPDPD   36 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCCCC
Confidence            478999996 6899999999999987   6777776543

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=92.82  E-value=2.7  Score=30.54  Aligned_cols=35  Identities=11%  Similarity=0.163  Sum_probs=25.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +++.|.| .|.+|..+++.+.+.+.++..+.+++|+
T Consensus         2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~   36 (265)
T PRK13304          2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRN   36 (265)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCC
Confidence            5788989 6999999999998763244344555553

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=92.80  E-value=0.03  Score=36.08  Aligned_cols=28  Identities=25%  Similarity=0.400  Sum_probs=22.0

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDI   37 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~   37 (152)
                      ...+|-|.|+ |.+|.++.+.|.+.|+.+
T Consensus         9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v   36 (127)
T PF10727_consen    9 ARLKIGIIGA-GRVGTALARALARAGHEV   36 (127)
T ss_dssp             ---EEEEECT-SCCCCHHHHHHHHTTSEE
T ss_pred             CccEEEEECC-CHHHHHHHHHHHHCCCeE
Confidence            3468889995 899999999999999743

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.77  E-value=0.66  Score=34.10  Aligned_cols=33  Identities=27%  Similarity=0.401  Sum_probs=28.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL   43 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~   43 (152)
                      ++|++++|.|.+..+|+.++..|.+++.   .|..+
T Consensus       156 l~Gk~vvViGrS~iVG~Pla~lL~~~~a---tVt~c  188 (284)
T PRK14190        156 ISGKHVVVVGRSNIVGKPVGQLLLNENA---TVTYC  188 (284)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEE
Confidence            6899999999999999999999998864   45444

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=92.74  E-value=0.26  Score=34.91  Aligned_cols=39  Identities=13%  Similarity=0.233  Sum_probs=31.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++++|.|+ |+.|..++..|...|.+..++++++|+.
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~g   61 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKG   61 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCC
Confidence            67789999996 8899999999998865212899999973

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=92.73  E-value=0.23  Score=36.96  Aligned_cols=34  Identities=24%  Similarity=0.381  Sum_probs=26.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      +.+|.|.|++|+.|.++++.|.++ +.+ .+..+..
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~h-p~~-~l~~~~s   35 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGR-SDI-ELLSIPE   35 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcC-CCe-EEEEEec
Confidence            458899999999999999988887 455 4544443

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=92.70  E-value=0.19  Score=37.36  Aligned_cols=34  Identities=26%  Similarity=0.324  Sum_probs=26.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      -+|.|.|++|+.|.++++.|..+ +++..+.+.++
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~H-P~~el~~l~s~   35 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGR-DDIELLSIAPD   35 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCC-CCeEEEEEecc
Confidence            37899999999999999999998 56644444444

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.68  E-value=0.62  Score=34.27  Aligned_cols=26  Identities=31%  Similarity=0.549  Sum_probs=24.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhh
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRS   33 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~   33 (152)
                      ++|++++|.|.+..+|+.++..|.++
T Consensus       151 l~Gk~vvViGrS~iVGkPla~lL~~~  176 (287)
T PRK14181        151 LHGRHVAIVGRSNIVGKPLAALLMQK  176 (287)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHhC
Confidence            67999999999999999999999987

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.65  E-value=0.58  Score=34.43  Aligned_cols=28  Identities=29%  Similarity=0.506  Sum_probs=25.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      +.|++++|.|.+..+|+.++..|.+++.
T Consensus       157 l~GK~vvViGrS~iVGkPla~lL~~~~A  184 (288)
T PRK14171        157 LTGKNVVIIGRSNIVGKPLSALLLKENC  184 (288)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCC
Confidence            6899999999999999999999998864

>KOG0023|consensus

Probab=92.58  E-value=0.7  Score=34.57  Aligned_cols=45  Identities=13%  Similarity=0.274  Sum_probs=31.7

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHH
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEF   59 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~   59 (152)
                      .|+.+.|+|++| +|.--++.-...|.   +|+.++++..  .-++.+..+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~---rV~vis~~~~--kkeea~~~L  225 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGM---RVTVISTSSK--KKEEAIKSL  225 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCc---EEEEEeCCch--hHHHHHHhc
Confidence            688999999888 88776666666786   7788887643  224444444

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=92.48  E-value=2.7  Score=30.29  Aligned_cols=70  Identities=19%  Similarity=0.208  Sum_probs=44.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++|+|.|||+= |+.++..|.+.|+.   +++..-...+. .                      ......++.+-+.+.
T Consensus         2 ~~~IlvlgGT~e-gr~la~~L~~~g~~---v~~Svat~~g~-~----------------------~~~~~~v~~G~l~~~   54 (248)
T PRK08057          2 MPRILLLGGTSE-ARALARALAAAGVD---IVLSLAGRTGG-P----------------------ADLPGPVRVGGFGGA   54 (248)
T ss_pred             CceEEEEechHH-HHHHHHHHHhCCCe---EEEEEccCCCC-c----------------------ccCCceEEECCCCCH
Confidence            568999999975 89999999988763   33333221111 0                      013455566666443


Q ss_pred             CCCCChhHHHHHhc--cccEEEecc
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGA  112 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a  112 (152)
                            +++..++.  +++.||...
T Consensus        55 ------~~l~~~l~~~~i~~VIDAT   73 (248)
T PRK08057         55 ------EGLAAYLREEGIDLVIDAT   73 (248)
T ss_pred             ------HHHHHHHHHCCCCEEEECC
Confidence                  35777776  789999864

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.40  E-value=0.68  Score=33.98  Aligned_cols=28  Identities=29%  Similarity=0.437  Sum_probs=25.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      ++|++++|.|.+..+|+.++..|.+++.
T Consensus       155 l~Gk~vvViGrS~iVGkPla~lL~~~~A  182 (282)
T PRK14182        155 PKGKRALVVGRSNIVGKPMAMMLLERHA  182 (282)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCC
Confidence            6899999999999999999999998864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	152
4dqv_A	478	Crystal Structure Of Reductase (R) Domain Of Non-Ri		5e-09
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-04
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-04
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-04
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-04
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		5e-04
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-04
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		5e-04
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		5e-04
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		6e-04
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		6e-04

>pdb|4DQV|A Chain A, Crystal Structure Of Reductase (R) Domain Of Non-Ribosomal Peptide Synthetase From Mycobacterium Tuberculosis Length = 478

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 11  RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEF--SKLPVFERL 68
           R+VL+TG TGF+G+ L+ +LLR     G++  L RA+     + RL +   S  P   R 
Sbjct: 74  RTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRH 133
Query: 69  RKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAAN 128
            KE  A   RL ++ GD  + +LG+       L E V ++ + AA +       E    N
Sbjct: 134 FKELAA--DRLEVVAGDKSEPDLGLDQPXWRRLAETVDLIVDSAAXVN-AFPYHELFGPN 190
Query: 129 TRGTQRLLDIALKMK----KLVVSLDIG 152
             GT  L+ IAL  K      V + D+G
Sbjct: 191 VAGTAELIRIALTTKLKPFTYVSTADVG 218

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGKH 51
Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
           P        +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 52  PT------FVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99
Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGKH 51
Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
           P        +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 52  PT------FVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99
Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGKH 51
Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
           P        +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 52  PT------FVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99
Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGKH 51
Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
           P        +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 52  PT------FVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99
Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGKH 51
Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
           P        +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 52  PT------FVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99
Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGKH 51
Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
           P        +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 52  PT------FVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99
Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGKH 51
Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
           P        +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 52  PT------FVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99
Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGKH 51
Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
           P        +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 52  PT------FVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99
Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGKH 51
Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
           P        +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 52  PT------FVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99
Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGKH 51
Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
           P        +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 52  PT------FVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99
Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	1e-34
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-08
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	6e-07
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	7e-07
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-06
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	5e-06
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	6e-06
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	8e-06
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-05
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	4e-05
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	5e-05
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	7e-05
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	9e-05
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	2e-04
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	3e-04
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	6e-04

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score =  125 bits (314), Expect = 1e-34
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 1/134 (0%)

Query: 10  GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLR 69
            R+VL+TG TGF+G+ L+ +LLR     G++  L RA+     + RL +       E LR
Sbjct: 73  LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLR 132

Query: 70  KECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANT 129
                   RL ++ GD  + +LG+       L E V ++ + AA +       E    N 
Sbjct: 133 HFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAF-PYHELFGPNV 191

Query: 130 RGTQRLLDIALKMK 143
            GT  L+ IAL  K
Sbjct: 192 AGTAELIRIALTTK 205

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 17/138 (12%), Positives = 37/138 (26%), Gaps = 35/138 (25%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIG-KVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71
             V G TG +G      +  +    G  + ++ R      P +++   + L         
Sbjct: 16  YAVLGATGLLGHHAARAIRAA----GHDLVLIHR------PSSQIQRLAYLEP------- 58

Query: 72  CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKEN-VAANTR 130
                        ++L        + L      +  V   A          +  VA+   
Sbjct: 59  --------ECRVAEMLDH------AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALG 104

Query: 131 GTQRLLDIALKM--KKLV 146
            T       L+    +++
Sbjct: 105 QTNPFYAACLQARVPRIL 122

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 46.2 bits (110), Expect = 6e-07
 Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 38/137 (27%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           +LVTG  G +G+V+ E+L      +                 RLA+ S L          
Sbjct: 6   LLVTGAAGQLGRVMRERLAPMAEIL-----------------RLADLSPL---------- 38

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLM-LQEEVSVVFNGAASLKLEAELKENVAANTRG 131
                    ++ D       + D++ +  +      + +    + +E   ++ +  N  G
Sbjct: 39  DPAGPNEECVQCD-------LADANAVNAMVAGCDGIVHLGG-ISVEKPFEQILQGNIIG 90

Query: 132 TQRLLDIALK--MKKLV 146
              L + A      ++V
Sbjct: 91  LYNLYEAARAHGQPRIV 107

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 46.2 bits (110), Expect = 7e-07
 Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 35/140 (25%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           +LVTG +G +G  L+  L        K  I     +  T                     
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGK--KNVIASDIVQRDTG-------------------- 39

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA--SLKLEAELKENVAANTR 130
                 +  I  D+   +   +     + +  +  +F+ A   S K E +       N  
Sbjct: 40  -----GIKFITLDVSNRDEIDR----AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMN 90

Query: 131 GTQRLLDIA--LKMKKLVVS 148
           GT  +L+ A   +++K+V+ 
Sbjct: 91  GTYNILEAAKQHRVEKVVIP 110

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 30/132 (22%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           + + G  G +G+ L ++L+               K G      + +     + +  + E 
Sbjct: 17  IAIIGAAGMVGRKLTQRLV---------------KDGSLGGKPVEK---FTLIDVFQPEA 58

Query: 73  PAQLS-RLHIIEGDILQANLGIKDSDLL--MLQEEVSVVFNGAASLKLEAELKENVAA-- 127
           PA  S  +     D+               +++    V+F+ AA +  EAEL  +     
Sbjct: 59  PAGFSGAVDARAADLS-------APGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRI 111

Query: 128 NTRGTQRLLDIA 139
           N  GT+ L D  
Sbjct: 112 NLDGTRYLFDAI 123

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 46/155 (29%)

Query: 8   YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR--AKRGLTPKARLAEFSKLPVF 65
              +++L+TGGTG  GK  + K+L +  +  K+ +  R   K+                 
Sbjct: 19  LDNQTILITGGTGSFGKCFVRKVLDT-TNAKKIIVYSRDELKQ----------------- 60

Query: 66  ERLRKECPAQLSRLHIIEGDILQANLGIKDSD-LLMLQEEVSVVFNGAASLK-------- 116
             +  E      R+    GD       ++D + L    E V +  + AA+LK        
Sbjct: 61  SEMAMEFND--PRMRFFIGD-------VRDLERLNYALEGVDICIH-AAALKHVPIAEYN 110

Query: 117 -LEAELKENVAANTRGTQRLLDIALKMK-KLVVSL 149
            LE  +K N+     G   +++  LK     V++L
Sbjct: 111 PLEC-IKTNIM----GASNVINACLKNAISQVIAL 140

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 43.4 bits (103), Expect = 6e-06
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 29/146 (19%)

Query: 10  GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL----CRAKRGLTPKARLAEFSKLPVF 65
            +++L+TGG GF+G  L      + P   KV +L              + L  F  L  F
Sbjct: 10  NQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68

Query: 66  ERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA----SLKLEAEL 121
                       +  +I  DI       +     + +     +F+ AA    ++  +  +
Sbjct: 69  ------------KGEVIAADINNPLDLRR-----LEKLHFDYLFHQAAVSDTTMLNQELV 111

Query: 122 KENVAANTRGTQRLLDIALKMKKLVV 147
            +    N +    LL+IA   K  V+
Sbjct: 112 MKT---NYQAFLNLLEIARSKKAKVI 134

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 43.2 bits (101), Expect = 8e-06
 Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 31/146 (21%)

Query: 11  RSVLVTGGTGFMGKVLLEKLLRSCPDIG--KVYILCRAKRGLTPKARLAEFSKLPVFERL 68
              L+ G TG +G  L E L  +    G  KVY + R                     R 
Sbjct: 2   SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR---------------------RT 40

Query: 69  RKECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAAN 128
           R       + ++ ++ DI   +        L    +V+ VF    +    +  +EN  AN
Sbjct: 41  RPAWHED-NPINYVQCDISDPD---DSQAKLSPLTDVTHVF--YVTWANRSTEQENCEAN 94

Query: 129 TRGTQRLLDIALKMKKLV--VSLDIG 152
           ++  + +LD  +     +  +SL  G
Sbjct: 95  SKMFRNVLDAVIPNCPNLKHISLQTG 120

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 38/139 (27%)

Query: 11  RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRK 70
             +LVTG  G +G  +   L     +   V +      G        E            
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGTLAHE---VRLSDIVDLG--AAEAHEEI----------- 46

Query: 71  ECPAQLSRLHIIEGDILQANLGIKDSDLLM-LQEEVSVVFNGAASLKLEAELKENVAANT 129
                      +  D+        D+  +  L ++   + +    + +E    + + AN 
Sbjct: 47  -----------VACDLA-------DAQAVHDLVKDCDGIIHLGG-VSVERPWNDILQANI 87

Query: 130 RGTQRLLDIA--LKMKKLV 146
            G   L + A  L   ++V
Sbjct: 88  IGAYNLYEAARNLGKPRIV 106

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 31/143 (21%), Positives = 44/143 (30%), Gaps = 42/143 (29%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIG-KVYI---LCRAKRGLTPKARLAEFSKLPVFERL 68
           V +TG  G +G  + E LL      G KV         +R                 E L
Sbjct: 24  VFITGICGQIGSHIAELLLER----GDKVVGIDNFATGRR-----------------EHL 62

Query: 69  RKECPAQLSRLHIIEGDILQANLGIKDSDL---LMLQEEVSVVFNGAASLKLEAELKENV 125
                     L  +EG I        D  L   L+   +   V + AAS K   +   + 
Sbjct: 63  -----KDHPNLTFVEGSI-------ADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDT 110

Query: 126 AANTRGTQRLLDIALKM--KKLV 146
             N  G   ++  A K    + V
Sbjct: 111 LTNCVGGSNVVQAAKKNNVGRFV 133

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 40.6 bits (96), Expect = 5e-05
 Identities = 27/143 (18%), Positives = 42/143 (29%), Gaps = 51/143 (35%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIG-KVYILCRAKRGLTPKARLAEFSKLPVFERLRKE 71
           + VTGGTGF+G+ ++E +       G    IL R+           E+            
Sbjct: 5   IAVTGGTGFLGQYVVESIKND----GNTPIILTRSIGN--KAINDYEY------------ 46

Query: 72  CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENV 125
                        D           DL+    +V  V + AA       +          
Sbjct: 47  ----------RVSDY-------TLEDLINQLNDVDAVVHLAATRGSQGKI-------SEF 82

Query: 126 AANTRGTQRLLDIALK--MKKLV 146
             N   TQ L D   +  +  +V
Sbjct: 83  HDNEILTQNLYDACYENNISNIV 105

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 40.2 bits (94), Expect = 7e-05
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45
          +SV + G +G  G+VLL+++L       KV ++ R
Sbjct: 19 KSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGR 52

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 40.0 bits (94), Expect = 9e-05
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPK 53
           + VL+ G TG  G+ LL+++L   P + KV    R      P+
Sbjct: 5  PKRVLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKALAEHPR 47

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 44/148 (29%)

Query: 8   YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYI---LCRAKRGLTPKARLAEFSKLPV 64
            A  +V+V GG GF+G  L+++LL    +  +V++   L  A++                
Sbjct: 30  LANTNVMVVGGAGFVGSNLVKRLLELGVN--QVHVVDNLLSAEK---------------- 71

Query: 65  FERLRKECPAQLSRLHIIEGDILQANLGIKDSDLLM-LQEEVSVVFNGAA------SLKL 117
              +          +   E         I D  LL  LQ+E   VF+ A       S+  
Sbjct: 72  -INV-----PDHPAVRFSETS-------ITDDALLASLQDEYDYVFHLATYHGNQSSIH- 117

Query: 118 EAELKENVAANTRGTQRLLDIALKMKKL 145
             +   +   NT  T +L +     K+L
Sbjct: 118 --DPLADHENNTLTTLKLYERLKHFKRL 143

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 37.4 bits (87), Expect = 6e-04
 Identities = 16/137 (11%), Positives = 42/137 (30%), Gaps = 36/137 (26%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           +++ G +GF+G  LL + L                RG    A            R  ++ 
Sbjct: 7   IVLIGASGFVGSALLNEALN---------------RGFEVTA----------VVRHPEKI 41

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGT 132
             +   L + + D+   +      ++  + +    V +         ++        +  
Sbjct: 42  KIENEHLKVKKADVSSLD------EVCEVCKGADAVISAFNPGWNNPDI---YDETIKVY 92

Query: 133 QRLLDIALKM--KKLVV 147
             ++D   K    + ++
Sbjct: 93  LTIIDGVKKAGVNRFLM 109

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.82
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.81
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.81
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.8
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.8
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.79
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.79
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.79
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.79
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.79
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.78
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.78
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.77
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.77
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.77
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.77
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.77
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.77
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.77
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.77
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.76
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.76
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.76
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.76
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.76
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.76
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.76
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.76
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.76
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.75
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.75
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.75
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.75
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.75
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.75
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.75
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.74
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.74
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.74
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.74
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.74
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.74
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.74
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.74
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.74
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.74
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.74
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.74
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.74
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.74
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.73
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.73
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.73
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.73
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.73
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.73
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.73
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.73
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.73
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.73
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.73
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.73
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.73
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.73
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.73
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.73
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.73
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.73
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.73
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.73
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.73
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.73
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.73
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.73
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.73
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.73
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.72
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.72
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.72
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.72
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.72
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.72
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.72
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.72
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.72
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.72
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.72
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.72
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.72
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.72
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.72
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.72
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.72
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.72
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.72
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.72
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.72
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.72
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.72
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.72
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.72
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.72
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.72
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.72
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.72
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.72
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.72
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.72
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.72
1spx_A	278	Short-chain reductase family member (5L265); paral	99.72
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.71
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.71
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.71
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.71
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.71
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.71
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.71
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.71
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.71
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.71
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.71
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.71
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.71
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.71
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.71
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.71
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.71
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.71
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.71
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.71
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.71
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.71
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.71
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.71
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.71
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.71
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.71
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.71
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.71
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.71
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.71
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.71
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.71
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.71
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.7
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.7
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.7
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.7
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.7
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.7
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.7
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.7
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.7
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.7
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.7
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.7
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.7
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.7
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.7
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.7
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.7
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.7
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.7
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.69
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.69
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.69
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.69
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.69
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.69
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.69
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.69
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.69
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.69
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.69
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.69
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.69
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.69
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.69
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.69
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.69
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.69
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.69
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.69
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.69
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.69
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.69
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.69
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.69
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.69
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.69
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.69
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.69
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.69
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.68
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.68
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.68
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.68
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.68
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.68
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.68
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.68
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.68
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.68
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.68
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.68
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.68
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.68
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.68
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.68
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.68
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.68
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.68
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.68
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.68
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.68
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.67
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.67
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.67
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.67
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.67
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.67
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.67
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.67
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.67
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.67
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.67
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.67
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.67
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.67
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.67
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.66
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.66
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.66
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.66
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.66
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.66
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.66
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.66
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.66
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.66
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.66
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.66
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.65
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.65
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.65
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.65
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.65
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.65
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.65
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.65
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.64
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.64
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.64
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.64
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.64
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.64
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.64
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.63
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.63
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.63
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.63
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.63
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.63
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.63
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.63
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.62
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.62
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.62
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.62
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.62
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.62
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.62
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.62
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.62
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.61
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.61
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.61
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.61
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.6
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.6
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.6
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.59
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.59
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.57
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.57
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.57
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.56
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.56
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.56
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.56
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.55
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.53
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.52
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.51
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.47
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.46
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.45
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.45
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.44
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.43
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.43
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.4
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.35
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.32
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.3
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.3
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.28
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.26
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.26
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.25
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.24
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.23
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.15
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.07
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.95
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.92
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.89
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.79
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.77
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.71
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.7
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.68
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.63
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.48
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.43
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.38
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.34
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.29
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.22
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.19
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.18
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.12
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.97
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.96
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.96
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.86
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.79
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.7
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.68
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.62
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.6
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.58
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.57
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.53
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.52
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.52
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.5
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.45
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.45
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.45
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.44
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.44
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.44
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.44
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.43
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.41
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.32
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.3
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.27
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.26
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.24
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.22
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.22
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.21
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.2
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.2
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.18
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.16
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.13
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.09
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.06
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.05
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.98
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.96
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.95
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.92
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.9
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.89
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.87
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.87
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.84
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.83
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.83
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.8
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.8
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.78
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.77
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.72
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.72
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.68
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.65
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.61
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.61
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.58
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.57
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.53
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.51
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.47
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.45
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.43
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.39
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.38
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.37
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.36
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.35
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.31
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	96.26
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.26
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.26
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.21
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	96.15
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.14
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.12
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.1
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.1
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.08
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.08
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.05
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	96.04
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.02
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.01
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.01
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.97
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.96
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	95.89
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	95.86
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.86
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	95.84
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.83
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.82
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	95.8
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	95.78
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	95.74
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.74
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.67
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	95.66
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.66
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.64
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.63
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.63
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	95.58
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	95.58
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	95.56
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	95.55
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.51
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.45
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	95.41
3kb6_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.38
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.36
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.36
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	95.35
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	95.32
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.3
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.28
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	95.24
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.2
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.18
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	95.17
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	95.16
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.14
1lnq_A	336	MTHK channels, potassium channel related protein;	95.13
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	95.07
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.03
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	95.01
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	95.0
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	94.98
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	94.94
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	94.94
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	94.92
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	94.88
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	94.84
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	94.81
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	94.78
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	94.78
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	94.75
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	94.73
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.71
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	94.71
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	94.69
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	94.68
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	94.67
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	94.64
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	94.64
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	94.63
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.63
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	94.59
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	94.59
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	94.56
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	94.55
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	94.51
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	94.49
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	94.47
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	94.44
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	94.43
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	94.43
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	94.34
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	94.31
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	94.3

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=8.3e-21  Score=145.76  Aligned_cols=141  Identities=30%  Similarity=0.357  Sum_probs=109.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhh---CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRS---CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~---g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      ..++|+|+||||+|+||++++++|++.   |+   +|++++|+.......+++......+....+.........++.++.
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~---~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDG---RLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA  146 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTC---EEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCC---EEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence            357899999999999999999999998   64   889999986644344444443332111111111111236899999


Q ss_pred             cccCCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         84 GDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +|++++.++++.+++..+++++|+|||+||..+. .++...+++|+.++.++++++.+. ++++|||+|
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iS  213 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVS  213 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEE
T ss_pred             eECCCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEe
Confidence            9999988888888999999999999999998876 666678899999999999999986 688999987

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.82  E-value=5.7e-20  Score=131.31  Aligned_cols=110  Identities=16%  Similarity=0.142  Sum_probs=94.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++||||+|+||+++++.|++.|+   +|++++|+.....                        ..++.++.+|++
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~---~V~~~~r~~~~~~------------------------~~~~~~~~~Dl~   53 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAE---ILRLADLSPLDPA------------------------GPNEECVQCDLA   53 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEE---EEEEEESSCCCCC------------------------CTTEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCC---EEEEEecCCcccc------------------------CCCCEEEEcCCC
Confidence            4568999999999999999999999985   7888898764221                        257889999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.++++++|+||||||.. ...+++.++++|+.++.++++++.+. +.++||++|
T Consensus        54 d~~------~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~S  110 (267)
T 3rft_A           54 DAN------AVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFAS  110 (267)
T ss_dssp             CHH------HHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             CHH------HHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence            854      7899999999999999985 46678889999999999999999887 678999986

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.81  E-value=2e-19  Score=132.81  Aligned_cols=126  Identities=22%  Similarity=0.347  Sum_probs=96.9

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRL   79 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (152)
                      |+.+.+.+++|+|+||||+|++|++++++|++. |+  ..|++++|++.   ..+.+.....              ..++
T Consensus        12 ~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r~~~---~~~~~~~~~~--------------~~~v   72 (344)
T 2gn4_A           12 MPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSRDEL---KQSEMAMEFN--------------DPRM   72 (344)
T ss_dssp             ----CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEESCHH---HHHHHHHHHC--------------CTTE
T ss_pred             CccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEECChh---hHHHHHHHhc--------------CCCE
Confidence            345666788999999999999999999999999 75  37888888532   1111111100              2578


Q ss_pred             EEEEcccCCCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         80 HIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        80 ~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .++.+|++|++      ++.++++++|+|||+||....   ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        73 ~~~~~Dl~d~~------~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~S  141 (344)
T 2gn4_A           73 RFFIGDVRDLE------RLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALS  141 (344)
T ss_dssp             EEEECCTTCHH------HHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred             EEEECCCCCHH------HHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEec
Confidence            89999999854      688899999999999997653   3455678999999999999999997 688999987

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.81  E-value=5.3e-19  Score=130.32  Aligned_cols=125  Identities=28%  Similarity=0.294  Sum_probs=97.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+|+||||+|+||++++++|++.|+   .|++++|+....  .+.+..+....        ......++.++.+|++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~   89 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQ---VVIGLDNFSTGH--QYNLDEVKTLV--------STEQWSRFCFIEGDIR   89 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCC--HHHHHHHHHTS--------CHHHHTTEEEEECCTT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCCCc--hhhhhhhhhcc--------ccccCCceEEEEccCC
Confidence            5678999999999999999999999986   788999876532  23333221100        0000157899999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.++++++|+|||+||....   ..++...+++|+.++.++++++.+. ++++|||+|
T Consensus        90 d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~S  150 (351)
T 3ruf_A           90 DLT------TCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAA  150 (351)
T ss_dssp             CHH------HHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred             CHH------HHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence            854      789999999999999997543   3456678999999999999999997 688999986

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.80  E-value=3e-19  Score=130.89  Aligned_cols=127  Identities=23%  Similarity=0.181  Sum_probs=96.7

Q ss_pred             ccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          3 DVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         3 ~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      .|...+++++++||||+|+||++++++|++.|+   .|++++|+...   .+.+.....        .   ....++.++
T Consensus         4 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~---~~~~~~~~~--------~---~~~~~~~~~   66 (342)
T 1y1p_A            4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHGY---KVRGTARSASK---LANLQKRWD--------A---KYPGRFETA   66 (342)
T ss_dssp             TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHHHH--------H---HSTTTEEEE
T ss_pred             CcccCCCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCccc---HHHHHHHhh--------c---cCCCceEEE
Confidence            345567889999999999999999999999986   77888885321   111211100        0   001467888


Q ss_pred             -EcccCCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         83 -EGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        83 -~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                       .+|+++++      ++.++++++|+|||+||......++...+++|+.++.++++++.+..++++||++|
T Consensus        67 ~~~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~S  131 (342)
T 1y1p_A           67 VVEDMLKQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS  131 (342)
T ss_dssp             ECSCTTSTT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEEC
T ss_pred             EecCCcChH------HHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence             79999876      46777789999999999876656778899999999999999998643678999987

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.80  E-value=4.3e-19  Score=125.99  Aligned_cols=127  Identities=16%  Similarity=0.098  Sum_probs=95.3

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |+.|++ +++|+++||||+++||+++++.|+++|+   +|++.+|+..  .+.+..+++...             ..++.
T Consensus         1 Ms~~f~-L~gKvalVTGas~GIG~aia~~la~~Ga---~Vvi~~~~~~--~~~~~~~~l~~~-------------g~~~~   61 (255)
T 4g81_D            1 MTALFD-LTGKTALVTGSARGLGFAYAEGLAAAGA---RVILNDIRAT--LLAESVDTLTRK-------------GYDAH   61 (255)
T ss_dssp             --CTTC-CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEECCSCHH--HHHHHHHHHHHT-------------TCCEE
T ss_pred             CCCCcC-CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHhc-------------CCcEE
Confidence            777776 8999999999999999999999999996   7788887532  223333333221             36788


Q ss_pred             EEEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----  142 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----  142 (152)
                      .+.+|+++++      ++++++       .++|++|||||...       ..++|+.++++|+.+++.+.+++.+.    
T Consensus        62 ~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~  135 (255)
T 4g81_D           62 GVAFDVTDEL------AIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR  135 (255)
T ss_dssp             ECCCCTTCHH------HHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeCCCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence            9999999965      454443       47899999999754       26789999999999999999887542    


Q ss_pred             CCCcceEecC
Q psy11862        143 KKLVVSLDIG  152 (152)
Q Consensus       143 ~~~~~~v~~S  152 (152)
                      ++..++|++|
T Consensus       136 ~~~G~IVnis  145 (255)
T 4g81_D          136 NSGGKIINIG  145 (255)
T ss_dssp             TCCEEEEEEC
T ss_pred             cCCCEEEEEe
Confidence            2446888876

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.79  E-value=3.4e-19  Score=131.15  Aligned_cols=122  Identities=21%  Similarity=0.268  Sum_probs=91.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+|+||||+|+||++++++|++.|+++ .|++++|....... +.+..+              ....++.++.+|++
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~-~~l~~~--------------~~~~~~~~~~~Dl~   85 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNL-NNVKSI--------------QDHPNYYFVKGEIQ   85 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCG-GGGTTT--------------TTCTTEEEEECCTT
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccch-hhhhhh--------------ccCCCeEEEEcCCC
Confidence            567899999999999999999999998654 77778776532211 111111              01257899999999


Q ss_pred             CCCCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      .+.+++++  +|+|||+||....   ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        86 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~S  148 (346)
T 4egb_A           86 NGE------LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVS  148 (346)
T ss_dssp             CHH------HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEE
T ss_pred             CHH------HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeC
Confidence            854      68888886  9999999997654   3556668999999999999999997 688999986

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.79  E-value=9e-19  Score=129.78  Aligned_cols=133  Identities=21%  Similarity=0.173  Sum_probs=96.5

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHh--hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCc
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLR--SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSR   78 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~--~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (152)
                      |..|...+++|+|+||||+||||++++++|++  .|+   .|++++|+...........+.        +.........+
T Consensus         1 M~~~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~---~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~~~   69 (362)
T 3sxp_A            1 MRYIDDELENQTILITGGAGFVGSNLAFHFQENHPKA---KVVVLDKFRSNTLFSNNRPSS--------LGHFKNLIGFK   69 (362)
T ss_dssp             CCSSSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTS---EEEEEECCCCC-------CCC--------CCCGGGGTTCC
T ss_pred             CcccchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCC---eEEEEECCCccccccccchhh--------hhhhhhccccC
Confidence            45555457889999999999999999999999  776   788898865421110000000        00000111346


Q ss_pred             EEEEEcccCCCCCCCChhHHHHH-hccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         79 LHIIEGDILQANLGIKDSDLLML-QEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        79 ~~~~~~D~~~~~~~~~~~~~~~~-~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.++.+|+++++      ++..+ ..++|+|||+||.... ..++...+++|+.++.++++++.+. +++ ||++|
T Consensus        70 ~~~~~~Dl~d~~------~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~S  137 (362)
T 3sxp_A           70 GEVIAADINNPL------DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYAS  137 (362)
T ss_dssp             SEEEECCTTCHH------HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEE
T ss_pred             ceEEECCCCCHH------HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeC
Confidence            789999999854      67777 7799999999997663 4678889999999999999999987 565 99886

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.79  E-value=1.2e-18  Score=127.79  Aligned_cols=120  Identities=18%  Similarity=0.291  Sum_probs=87.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++|+||||+||||++++++|++.|+   .|+++.|+.........+..+.              ...++.++.+|++++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~---~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~d~   71 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGY---AVNTTVRDPDNQKKVSHLLELQ--------------ELGDLKIFRADLTDE   71 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTC---EEEEEESCTTCTTTTHHHHHHG--------------GGSCEEEEECCTTTS
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC---EEEEEEcCcchhhhHHHHHhcC--------------CCCcEEEEecCCCCh
Confidence            57999999999999999999999997   6677778654221111111110              014688899999987


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccch-hhH-HHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLE-AEL-KENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++++|+|||+|+..... .+. .+++++|+.++.++++++.+.+++++||++|
T Consensus        72 ~------~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~S  130 (338)
T 2rh8_A           72 L------SFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTS  130 (338)
T ss_dssp             S------SSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred             H------HHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEe
Confidence            6      4778888999999999865432 222 3488999999999999999873478999987

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.79  E-value=8e-19  Score=129.20  Aligned_cols=108  Identities=23%  Similarity=0.207  Sum_probs=89.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++|+|+||||+|+||+++++.|++.|+   .|++++|+...                           .++.++.+|++
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~---------------------------~~~~~~~~Dl~   66 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGR---TVRGFDLRPSG---------------------------TGGEEVVGSLE   66 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTC---CEEEEESSCCS---------------------------SCCSEEESCTT
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCC---EEEEEeCCCCC---------------------------CCccEEecCcC
Confidence            5678999999999999999999999997   67888886541                           35678899998


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++..++.++|+|||+|+.... ...+...+++|+.++.++++++.+. ++++||++|
T Consensus        67 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~S  125 (347)
T 4id9_A           67 DGQ------ALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFAS  125 (347)
T ss_dssp             CHH------HHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred             CHH------HHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEC
Confidence            854      688899999999999997654 3445789999999999999999987 688999986

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.79  E-value=1e-18  Score=122.69  Aligned_cols=116  Identities=17%  Similarity=0.128  Sum_probs=93.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++|+++||||+|+||++++++|++.|+. .+|++++|++......                     ....+.++.+|++
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~-~~V~~~~r~~~~~~~~---------------------~~~~~~~~~~D~~   73 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKLTFDEE---------------------AYKNVNQEVVDFE   73 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCCCCCSG---------------------GGGGCEEEECCGG
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCC-CEEEEEEcCCCCcccc---------------------ccCCceEEecCcC
Confidence            57789999999999999999999999851 1678888876432100                     0135778899999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.++++++|+|||+||.......+...+++|+.++.++++++.+. +.++||++|
T Consensus        74 d~~------~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~S  131 (242)
T 2bka_A           74 KLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLS  131 (242)
T ss_dssp             GGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             CHH------HHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEc
Confidence            865      5788888999999999976555566778999999999999999886 678999987

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.78  E-value=8.2e-19  Score=122.98  Aligned_cols=112  Identities=17%  Similarity=0.224  Sum_probs=89.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcE-EEEEcc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRL-HIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D   85 (152)
                      .+++|+++||||+|+||++++++|++.|+   .|++++|+...      +..+..               .++ .++.+|
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~---~V~~~~R~~~~------~~~~~~---------------~~~~~~~~~D   73 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNKGH---EPVAMVRNEEQ------GPELRE---------------RGASDIVVAN   73 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSGGG------HHHHHH---------------TTCSEEEECC
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhCCC---eEEEEECChHH------HHHHHh---------------CCCceEEEcc
Confidence            47889999999999999999999999986   78889986431      111111               357 889999


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++ .       ++.+.++++|+|||+||... ..++...+++|+.++.++++++.+. +.++||++|
T Consensus        74 l~-~-------~~~~~~~~~D~vi~~ag~~~-~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~S  130 (236)
T 3e8x_A           74 LE-E-------DFSHAFASIDAVVFAAGSGP-HTGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVS  130 (236)
T ss_dssp             TT-S-------CCGGGGTTCSEEEECCCCCT-TSCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEEC
T ss_pred             cH-H-------HHHHHHcCCCEEEECCCCCC-CCCccccchhhHHHHHHHHHHHHHc-CCCEEEEEe
Confidence            98 2       36777889999999999764 4668889999999999999999887 688999986

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.78  E-value=1.8e-18  Score=126.86  Aligned_cols=120  Identities=23%  Similarity=0.242  Sum_probs=92.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++|+++||||+|+||++++++|++.|+   .|++++|+...... +.+..+..              ..++.++.+|++
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~-~~~~~~~~--------------~~~~~~~~~Dl~   62 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGY---EVYGADRRSGEFAS-WRLKELGI--------------ENDVKIIHMDLL   62 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCCSTTTT-HHHHHTTC--------------TTTEEECCCCTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCCccccc-ccHhhccc--------------cCceeEEECCCC
Confidence            4578999999999999999999999986   78888987653211 22222110              246888999998


Q ss_pred             CCCCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCC-cceEecC
Q psy11862         88 QANLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKL-VVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~S  152 (152)
                      +++      ++.+++++  +|+|||+||....   ..++...+++|+.++.++++++.+. ++ ++||++|
T Consensus        63 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~S  126 (345)
T 2z1m_A           63 EFS------NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQAS  126 (345)
T ss_dssp             CHH------HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEE
T ss_pred             CHH------HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEe
Confidence            854      67777775  6999999997653   3567789999999999999999987 55 7999886

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.77  E-value=1.5e-18  Score=128.95  Aligned_cols=115  Identities=17%  Similarity=0.188  Sum_probs=92.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .|++|+|+||||+|+||++++++|++. |+   .|++++|+....  .    .+.              ...++.++.+|
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~--~----~~~--------------~~~~v~~~~~D   77 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDW---EVFGMDMQTDRL--G----DLV--------------KHERMHFFEGD   77 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSC---EEEEEESCCTTT--G----GGG--------------GSTTEEEEECC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCC---EEEEEeCChhhh--h----hhc--------------cCCCeEEEeCc
Confidence            467889999999999999999999998 76   788899875421  0    000              02579999999


Q ss_pred             cC-CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 IL-QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~-~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++ ++      +.+.++++++|+|||+|+....   ..++...+++|+.++.++++++.+. + ++|||+|
T Consensus        78 l~~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~S  140 (372)
T 3slg_A           78 ITINK------EWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPS  140 (372)
T ss_dssp             TTTCH------HHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEEC
T ss_pred             cCCCH------HHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeC
Confidence            98 64      3688888899999999997664   3456678899999999999999998 5 8999987

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.77  E-value=1.8e-18  Score=126.88  Aligned_cols=122  Identities=18%  Similarity=0.256  Sum_probs=89.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++++++||||+||||++++++|++.|+   .|++++|+...  . +.+..+...          .....++.++.+|+++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~~--~-~~~~~~~~~----------~~~~~~~~~~~~Dl~d   67 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGY---TVRATVRDPTN--V-KKVKHLLDL----------PKAETHLTLWKADLAD   67 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCTTC--H-HHHHHHHTS----------TTHHHHEEEEECCTTS
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC---EEEEEECCcch--h-HHHHHHHhc----------ccCCCeEEEEEcCCCC
Confidence            578999999999999999999999997   67777886431  1 112211110          0001357889999998


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.++++++|+|||+|+....  ..+....+++|+.++.++++++.+.+.+++||++|
T Consensus        68 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~S  127 (337)
T 2c29_D           68 EG------SFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS  127 (337)
T ss_dssp             TT------TTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             HH------HHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEee
Confidence            76      578888899999999986543  22334588999999999999999873478999987

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.77  E-value=3.5e-18  Score=127.51  Aligned_cols=113  Identities=17%  Similarity=0.093  Sum_probs=92.8

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++|+|+||||+|+||++++++|++.|+   .|++++|+.......                     ...++.++.+|+++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~---------------------~~~~v~~~~~Dl~d   83 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGH---YVIASDWKKNEHMTE---------------------DMFCDEFHLVDLRV   83 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCSSSCG---------------------GGTCSEEEECCTTS
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCC---eEEEEECCCccchhh---------------------ccCCceEEECCCCC
Confidence            568999999999999999999999986   788889875422100                     01467889999998


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.++++++|+|||+|+....    ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        84 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~S  144 (379)
T 2c5a_A           84 ME------NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYAS  144 (379)
T ss_dssp             HH------HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred             HH------HHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence            54      688888999999999997653    4567889999999999999999987 688999986

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.77  E-value=5.4e-18  Score=125.12  Aligned_cols=125  Identities=28%  Similarity=0.258  Sum_probs=95.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+|+||||+|+||++++++|++.|+   .|++++|+....  .+.+..+...     +..   ....++.++.+|++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~--~~~~~~~~~~-----~~~---~~~~~~~~~~~Dl~   91 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQ---KVVGLDNFATGH--QRNLDEVRSL-----VSE---KQWSNFKFIQGDIR   91 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCC--HHHHHHHHHH-----SCH---HHHTTEEEEECCTT
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCccc--hhhHHHHhhh-----ccc---ccCCceEEEECCCC
Confidence            6788999999999999999999999986   788888865421  2222222100     000   00157889999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.++++++|+|||+||....   ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        92 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~S  152 (352)
T 1sb8_A           92 NLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAA  152 (352)
T ss_dssp             SHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred             CHH------HHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence            854      688888999999999997653   3567778999999999999999987 688999986

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.77  E-value=3.7e-18  Score=125.02  Aligned_cols=123  Identities=24%  Similarity=0.326  Sum_probs=91.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++|+++||||+||||++++++|++.|++. .|++++|....... +.+..+.              ...++.++.+|++
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~-~V~~~~r~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~   64 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDW-EVINIDKLGYGSNP-ANLKDLE--------------DDPRYTFVKGDVA   64 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCG-GGGTTTT--------------TCTTEEEEECCTT
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCC-EEEEEecCcccCch-hHHhhhc--------------cCCceEEEEcCCC
Confidence            346789999999999999999999997333 78888886432111 1111110              0257889999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.+++.++|+|||+||....   ..++..++++|+.++.++++++.+.+..++||++|
T Consensus        65 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S  126 (336)
T 2hun_A           65 DYE------LVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVS  126 (336)
T ss_dssp             CHH------HHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             CHH------HHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            854      688888899999999997643   34567789999999999999999873236999986

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.77  E-value=4.7e-18  Score=124.71  Aligned_cols=119  Identities=19%  Similarity=0.166  Sum_probs=93.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-HHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-PKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ++|+++||||+||||++++++|++.|+   .|++++|+..... ..+.+....               ..++.++.+|++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~   65 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY---DVVIADNLVNSKREAIARIEKIT---------------GKTPAFHETDVS   65 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCCSSSCTHHHHHHHHHH---------------SCCCEEECCCTT
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC---cEEEEecCCcchHHHHHHHHhhc---------------CCCceEEEeecC
Confidence            467999999999999999999999986   7788888754321 122222111               256888999999


Q ss_pred             CCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.++++  ++|+|||+||....   .......++.|+.++.++++++.+. ++++||++|
T Consensus        66 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~S  128 (341)
T 3enk_A           66 DER------ALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSS  128 (341)
T ss_dssp             CHH------HHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             CHH------HHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEe
Confidence            854      6888887  89999999997653   3445568899999999999999987 678999986

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.77  E-value=4.5e-18  Score=120.69  Aligned_cols=123  Identities=13%  Similarity=0.125  Sum_probs=92.8

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++|+++||||+++||+++++.|++.|.   +|++.+|++.  .+.+..+++..             ...++.++.+|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga---~Vv~~~~~~~--~~~~~~~~i~~-------------~g~~~~~~~~D   64 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDS---IVVAVELLED--RLNQIVQELRG-------------MGKEVLGVKAD   64 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEcc
Confidence            358999999999999999999999999985   7788888532  22222222221             13678899999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVV  147 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~  147 (152)
                      +++++      ++++++       .++|++|||||...        ..+.|+.++++|+.+++.+.+++.+.   ++..+
T Consensus        65 vt~~~------~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~  138 (254)
T 4fn4_A           65 VSKKK------DVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGV  138 (254)
T ss_dssp             TTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcE
Confidence            99965      444443       47899999999643        15778999999999999999998652   24568


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       139 IVnis  143 (254)
T 4fn4_A          139 IVNTA  143 (254)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            88875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.77  E-value=1.7e-18  Score=120.45  Aligned_cols=108  Identities=15%  Similarity=0.200  Sum_probs=86.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +|+|+||||+|++|++++++|++.|+   .|++++|++...                      .....++.++.+|++++
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~----------------------~~~~~~~~~~~~Dl~d~   58 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGF---EVTAVVRHPEKI----------------------KIENEHLKVKKADVSSL   58 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTC---EEEEECSCGGGC----------------------CCCCTTEEEECCCTTCH
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEEcCcccc----------------------hhccCceEEEEecCCCH
Confidence            47999999999999999999999986   788999865421                      01126789999999985


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++++|+|||+||...   .....+++|+.++.++++++.+. ++++||++|
T Consensus        59 ~------~~~~~~~~~d~vi~~a~~~~---~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S  111 (227)
T 3dhn_A           59 D------EVCEVCKGADAVISAFNPGW---NNPDIYDETIKVYLTIIDGVKKA-GVNRFLMVG  111 (227)
T ss_dssp             H------HHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred             H------HHHHHhcCCCEEEEeCcCCC---CChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeC
Confidence            4      78999999999999998652   12237788999999999999997 688999987

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.76  E-value=3.4e-18  Score=127.42  Aligned_cols=118  Identities=24%  Similarity=0.242  Sum_probs=94.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .+++|+|+||||+|+||++++++|++.| +   .|++++|+....  .+.+.                 ...++.++.+|
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~--~~~l~-----------------~~~~v~~~~~D   86 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVN---QVHVVDNLLSAE--KINVP-----------------DHPAVRFSETS   86 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCS---EEEEECCCTTCC--GGGSC-----------------CCTTEEEECSC
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCc---eEEEEECCCCCc--hhhcc-----------------CCCceEEEECC
Confidence            3678899999999999999999999998 6   778888865421  00000                 02578899999


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++++      ++.++++++|+|||+||....   ..++...+++|+.++.++++++.+.+++++||++|
T Consensus        87 l~d~~------~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~S  150 (377)
T 2q1s_A           87 ITDDA------LLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSA  150 (377)
T ss_dssp             TTCHH------HHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEE
T ss_pred             CCCHH------HHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence            99854      688888999999999997653   24667789999999999999998753578999986

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.76  E-value=3e-18  Score=125.72  Aligned_cols=113  Identities=17%  Similarity=0.187  Sum_probs=84.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+|+|+||||+|+||++++++|++.|+   .|++++|+....  . .   +         .      ..++.++.+|+++
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~--~-~---l---------~------~~~~~~~~~Dl~d   67 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGH---DLVLIHRPSSQI--Q-R---L---------A------YLEPECRVAEMLD   67 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECTTSCG--G-G---G---------G------GGCCEEEECCTTC
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEecChHhh--h-h---h---------c------cCCeEEEEecCCC
Confidence            346899999999999999999999986   788889875421  1 0   0         0      1267888999988


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.++++++|+|||+||.... ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        68 ~~------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~S  125 (342)
T 2x4g_A           68 HA------GLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVG  125 (342)
T ss_dssp             HH------HHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEEC
T ss_pred             HH------HHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEC
Confidence            54      688999999999999997543 3456678999999999999999987 688999987

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.76  E-value=1.4e-18  Score=126.48  Aligned_cols=121  Identities=20%  Similarity=0.292  Sum_probs=85.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec-CCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR-AKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +++++||||+||||++++++|++.|+   .|++++| +.........+..+             .....++.++.+|+++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dl~d   64 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGY---SVNTTIRADPERKRDVSFLTNL-------------PGASEKLHFFNADLSN   64 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECCCC----CCCHHHHTS-------------TTHHHHEEECCCCTTC
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCC---EEEEEEeCCccchhHHHHHHhh-------------hccCCceEEEecCCCC
Confidence            57899999999999999999999987   6777777 43210001111110             0001357788999998


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccch--hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLE--AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.++++++|+|||+|+.....  .....++++|+.++.++++++.+..++++||++|
T Consensus        65 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~S  124 (322)
T 2p4h_X           65 PD------SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTS  124 (322)
T ss_dssp             GG------GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEE
T ss_pred             HH------HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence            65      6888889999999999754321  1234488999999999999998863578999986

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.76  E-value=9.3e-18  Score=122.97  Aligned_cols=116  Identities=22%  Similarity=0.279  Sum_probs=91.1

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +.+++|+++||||+|+||++++++|++.|+   .|++++|+.....  +    ..             ....++.++.+|
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~----~~-------------~~l~~v~~~~~D   73 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGH---EILVIDNFATGKR--E----VL-------------PPVAGLSVIEGS   73 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTC---EEEEEECCSSSCG--G----GS-------------CSCTTEEEEECC
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCccch--h----hh-------------hccCCceEEEee
Confidence            356789999999999999999999999986   7888888643210  0    00             001468889999


Q ss_pred             cCCCCCCCChhHHHHHhc--cccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQE--EVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++++      ++.++++  ++|+|||+||....  ..++.  +++|+.++.++++++.+. ++++||++|
T Consensus        74 l~d~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~S  135 (330)
T 2pzm_A           74 VTDAG------LLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQ  135 (330)
T ss_dssp             TTCHH------HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEE
T ss_pred             CCCHH------HHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence            99854      6888888  89999999997653  23344  899999999999999987 678999986

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.76  E-value=6.6e-18  Score=124.80  Aligned_cols=121  Identities=26%  Similarity=0.255  Sum_probs=93.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+|+||||+|+||++++++|++.|+   .|++++|+.....  +....+.              ...++.++.+|+
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~~~~~~--------------~~~~~~~~~~Dl   66 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGA---TVKGYSLTAPTVP--SLFETAR--------------VADGMQSEIGDI   66 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCSSSS--CHHHHTT--------------TTTTSEEEECCT
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCC---eEEEEeCCCcccc--hhhHhhc--------------cCCceEEEEccc
Confidence            46789999999999999999999999986   7888998764321  1111110              025688899999


Q ss_pred             CCCCCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++++      ++.+++++  +|+|||+||....   ..++...+++|+.++.++++++.+.+.+++||++|
T Consensus        67 ~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S  131 (357)
T 1rkx_A           67 RDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT  131 (357)
T ss_dssp             TCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred             cCHH------HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEec
Confidence            9854      67777775  8999999996432   35567789999999999999999874478999987

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.76  E-value=1.8e-17  Score=116.88  Aligned_cols=125  Identities=17%  Similarity=0.107  Sum_probs=93.2

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |+..++ ++||+++||||+++||+++++.|++.|.   +|++.+|+..    .+..+.+...             ..+..
T Consensus         1 M~n~f~-L~GKvalVTGas~GIG~aiA~~la~~Ga---~Vvi~~r~~~----~~~~~~~~~~-------------g~~~~   59 (247)
T 4hp8_A            1 MKNPFS-LEGRKALVTGANTGLGQAIAVGLAAAGA---EVVCAARRAP----DETLDIIAKD-------------GGNAS   59 (247)
T ss_dssp             --CTTC-CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCC----HHHHHHHHHT-------------TCCEE
T ss_pred             CcCCcC-CCCCEEEEeCcCCHHHHHHHHHHHHcCC---EEEEEeCCcH----HHHHHHHHHh-------------CCcEE
Confidence            444444 8899999999999999999999999996   7788888643    2223332221             36788


Q ss_pred             EEEcccCCCCCCCChhHHHHHh--ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcc
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQ--EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVV  147 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~--~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~  147 (152)
                      .+.+|++|+..      ++..+  .++|++|||||...       .+++|+.++++|+.+++.+.+++.+.    +...+
T Consensus        60 ~~~~Dv~d~~~------v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~  133 (247)
T 4hp8_A           60 ALLIDFADPLA------AKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGK  133 (247)
T ss_dssp             EEECCTTSTTT------TTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             EEEccCCCHHH------HHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcE
Confidence            99999999762      33333  47999999999754       26789999999999999999987542    23468


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       134 IVnis  138 (247)
T 4hp8_A          134 VVNIA  138 (247)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            88876

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.76  E-value=9e-18  Score=118.79  Aligned_cols=124  Identities=19%  Similarity=0.239  Sum_probs=90.8

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |+.+.+ +++++++||||+|+||++++++|++.|+   +|++.+|+..  . .+.+.+..               .....
T Consensus         1 M~~~~~-l~gk~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~--~-~~~~~~~~---------------~~~~~   58 (248)
T 3op4_A            1 MSQFMN-LEGKVALVTGASRGIGKAIAELLAERGA---KVIGTATSES--G-AQAISDYL---------------GDNGK   58 (248)
T ss_dssp             -CCTTC-CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSHH--H-HHHHHHHH---------------GGGEE
T ss_pred             CccccC-CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--H-HHHHHHHh---------------cccce
Confidence            555544 6889999999999999999999999996   6788887532  1 11111110               13467


Q ss_pred             EEEcccCCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---C
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---K  143 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~  143 (152)
                      .+.+|+++++      ++.++++       ++|++|||||...       ..++|+..+++|+.+++++++++.+.   .
T Consensus        59 ~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~  132 (248)
T 3op4_A           59 GMALNVTNPE------SIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK  132 (248)
T ss_dssp             EEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence            8899999854      4555443       7899999999754       25678889999999999999998642   2


Q ss_pred             CCcceEecC
Q psy11862        144 KLVVSLDIG  152 (152)
Q Consensus       144 ~~~~~v~~S  152 (152)
                      +.+++|++|
T Consensus       133 ~~g~iv~is  141 (248)
T 3op4_A          133 RQGRIINVG  141 (248)
T ss_dssp             TCEEEEEEC
T ss_pred             CCCEEEEEc
Confidence            456888876

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.76  E-value=1.3e-17  Score=122.45  Aligned_cols=118  Identities=22%  Similarity=0.270  Sum_probs=90.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ||+|+||||+||||++++++|++.|+   .|++++|.... ...+.+..+..              ..++.++.+|++++
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~-~~~~~~~~l~~--------------~~~~~~~~~Dl~d~   62 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGI---DLIVFDNLSRK-GATDNLHWLSS--------------LGNFEFVHGDIRNK   62 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCST-THHHHHHHHHT--------------TCCCEEEECCTTCH
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCC---EEEEEeCCCcc-Cchhhhhhhcc--------------CCceEEEEcCCCCH
Confidence            36899999999999999999999986   77888875321 11222222211              14588899999985


Q ss_pred             CCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCc-ceEecC
Q psy11862         90 NLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLV-VSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  152 (152)
                      +      ++.+++++  +|+|||+||....   ..++...+++|+.++.++++++.+. +.+ +||++|
T Consensus        63 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~S  124 (347)
T 1orr_A           63 N------DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSS  124 (347)
T ss_dssp             H------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEE
T ss_pred             H------HHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEec
Confidence            4      68888877  9999999997653   3467778999999999999999987 454 899886

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.76  E-value=1.4e-17  Score=118.47  Aligned_cols=121  Identities=17%  Similarity=0.180  Sum_probs=89.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++..             ...++.++.+|++
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   68 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGA---SVYTCSRNQK--ELNDCLTQWRS-------------KGFKVEASVCDLS   68 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCEEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence            6789999999999999999999999986   6788888532  11111122111             1257888999999


Q ss_pred             CCCCCCChhHHHHHh--------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ--------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~--------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v  149 (152)
                      +++      ++.+++        .++|++|||||...       ..+.++..+++|+.++.++++++.+   ..+.+++|
T Consensus        69 ~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv  142 (260)
T 2ae2_A           69 SRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVV  142 (260)
T ss_dssp             CHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            854      455444        57999999999653       2466788999999999999999853   22457899


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       143 ~is  145 (260)
T 2ae2_A          143 FIS  145 (260)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.75  E-value=1.4e-17  Score=121.76  Aligned_cols=112  Identities=20%  Similarity=0.227  Sum_probs=89.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ||+++||||+|+||++++++|++.|+   .|++++|.....  .+                   ....++.++.+|++++
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~--~~-------------------~~~~~~~~~~~D~~~~   56 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGL---SVVVVDNLQTGH--ED-------------------AITEGAKFYNGDLRDK   56 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCC--GG-------------------GSCTTSEEEECCTTCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCCCcCc--hh-------------------hcCCCcEEEECCCCCH
Confidence            47899999999999999999999986   678888865421  00                   0013678899999885


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++  ++|+|||+||....   ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        57 ~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~S  117 (330)
T 2c20_A           57 A------FLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSS  117 (330)
T ss_dssp             H------HHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             H------HHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeC
Confidence            4      6888887  89999999997653   3466778999999999999999987 688999987

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.75  E-value=9.4e-18  Score=122.17  Aligned_cols=111  Identities=23%  Similarity=0.279  Sum_probs=88.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++++++||||+|+||++++++|++.|+   .|++++|+....                      .   -++.++.+|++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~----------------------~---l~~~~~~~Dl~   61 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNV---EVFGTSRNNEAK----------------------L---PNVEMISLDIM   61 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCTTCC----------------------C---TTEEEEECCTT
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCC---EEEEEecCCccc----------------------c---ceeeEEECCCC
Confidence            4678999999999999999999999986   778888865421                      0   15778899999


Q ss_pred             CCCCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.+++++  +|+|||+||....   ..++...+++|+.++.++++++...++.++||++|
T Consensus        62 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S  125 (321)
T 2pk3_A           62 DSQ------RVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIG  125 (321)
T ss_dssp             CHH------HHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred             CHH------HHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence            854      67777775  8999999997653   34677899999999999999997653578999986

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.75  E-value=1.3e-17  Score=122.44  Aligned_cols=118  Identities=16%  Similarity=0.205  Sum_probs=92.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCC----CcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPD----IGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~----~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      +++|+++||||+||||++++++|++.|+.    +..|++++|+......                     ....++.++.
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------------------~~~~~~~~~~   70 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------------------GFSGAVDARA   70 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------------------TCCSEEEEEE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------------------ccCCceeEEE
Confidence            67889999999999999999999999820    0167888886542110                     0125688899


Q ss_pred             cccCCCCCCCChhHHHHHh-ccccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcC----CCcceEecC
Q psy11862         84 GDILQANLGIKDSDLLMLQ-EEVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMK----KLVVSLDIG  152 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~-~~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~S  152 (152)
                      +|+++++      ++.+++ .++|+|||+||....  ..++...+++|+.++.++++++.+..    .+++||++|
T Consensus        71 ~Dl~d~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~S  140 (342)
T 2hrz_A           71 ADLSAPG------EAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTS  140 (342)
T ss_dssp             CCTTSTT------HHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred             cCCCCHH------HHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeC
Confidence            9999876      577777 489999999997642  35677789999999999999998763    268999886

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.75  E-value=1.3e-17  Score=122.76  Aligned_cols=121  Identities=21%  Similarity=0.173  Sum_probs=91.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC----CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG----LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +|+++||||+|+||++++++|++.|+   .|++++|....    ....+.+..+..         .   ...++.++.+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~r~~~~~~~~~~~l~~---------~---~~~~~~~~~~D   66 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGY---LPVVIDNFHNAFRGGGSLPESLRRVQE---------L---TGRSVEFEEMD   66 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC---CEEEEECSSSSCBCSSSSBHHHHHHHH---------H---HTCCCEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEecCCcccccccccHHHHHHHHh---------c---cCCceEEEECC
Confidence            47899999999999999999999987   56778875432    001122222110         0   02467889999


Q ss_pred             cCCCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++++      ++.++++  ++|+|||+||....   ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        67 ~~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~S  131 (348)
T 1ek6_A           67 ILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSS  131 (348)
T ss_dssp             TTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             CCCHH------HHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEC
Confidence            99854      6778777  89999999997643   3456778999999999999999886 678999986

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.75  E-value=1.5e-17  Score=118.51  Aligned_cols=122  Identities=21%  Similarity=0.226  Sum_probs=91.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+|+||++++++|+++|+   +|++.+|+..  ...+...++..            ....++.++.+|++
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~------------~~~~~~~~~~~Dv~   70 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGA---NVAVAGRSTA--DIDACVADLDQ------------LGSGKVIGVQTDVS   70 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHT------------TSSSCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh------------hCCCcEEEEEcCCC
Confidence            7889999999999999999999999996   7788888532  12222222211            11257889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+.   .+.+++|+
T Consensus        71 ~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~  144 (262)
T 3pk0_A           71 DRA------QCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVL  144 (262)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            954      455444       37999999999753       25678889999999999999988653   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       145 is  146 (262)
T 3pk0_A          145 TS  146 (262)
T ss_dssp             EC
T ss_pred             Ee
Confidence            75

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.75  E-value=1.7e-17  Score=120.52  Aligned_cols=126  Identities=15%  Similarity=0.160  Sum_probs=92.3

Q ss_pred             ccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          3 DVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         3 ~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      .+...+++++++||||+|+||++++++|++.|+   +|++.+|+..  .+.+...++..             ...++.++
T Consensus        24 ~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~   85 (301)
T 3tjr_A           24 GFLSGFDGRAAVVTGGASGIGLATATEFARRGA---RLVLSDVDQP--ALEQAVNGLRG-------------QGFDAHGV   85 (301)
T ss_dssp             CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEE
T ss_pred             hHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCceEEE
Confidence            333447789999999999999999999999996   6788888632  22222222211             13578899


Q ss_pred             EcccCCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-
Q psy11862         83 EGDILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-  144 (152)
Q Consensus        83 ~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-  144 (152)
                      .+|+++++      ++.++++       ++|++|||||...       ..+.+...+++|+.++.++++++.+.   .+ 
T Consensus        86 ~~Dv~d~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~  159 (301)
T 3tjr_A           86 VCDVRHLD------EMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT  159 (301)
T ss_dssp             ECCTTCHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred             EccCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC
Confidence            99999854      4554443       7899999999753       25667889999999999999998542   12 


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      ..++|++|
T Consensus       160 ~g~iv~is  167 (301)
T 3tjr_A          160 GGHIAFTA  167 (301)
T ss_dssp             CEEEEEEC
T ss_pred             CcEEEEeC
Confidence            46888876

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.75  E-value=1.6e-18  Score=131.12  Aligned_cols=130  Identities=22%  Similarity=0.257  Sum_probs=88.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ..+++|+||||+|+||++++++|++.|+   +|++++|+.......+++.......+....   ......++.++.+|++
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~---~~~~~~~v~~v~~Dl~  140 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSH---RIYCFIRADNEEIAWYKLMTNLNDYFSEET---VEMMLSNIEVIVGDFE  140 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEE---EEEEEEECSSHHHHHHHHHHHHHHHSCHHH---HHHHHTTEEEEEECC-
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCC---EEEEEECCCChHHHHHHHHHHHHHhccccc---cccccCceEEEeCCCC
Confidence            4578999999999999999999988875   889999976532233333322111000000   0011268999999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++.      +. .+.++|+|||+||......++...+++|+.++.++++++.+  +.++||++|
T Consensus       141 d~~~------l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~S  196 (427)
T 4f6c_A          141 CMDD------VV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVS  196 (427)
T ss_dssp             --CC------CC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEE
T ss_pred             Cccc------CC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEEC
Confidence            8552      33 66799999999998877777888999999999999999998  468999986

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.74  E-value=3.2e-17  Score=115.39  Aligned_cols=118  Identities=23%  Similarity=0.253  Sum_probs=91.8

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+.++||+++||||+++||+++++.|++.|+   +|++.+|+.....                     .....++..+.+
T Consensus         6 ~dlf~GK~alVTGas~GIG~aia~~la~~Ga---~Vv~~~~~~~~~~---------------------~~~~~~~~~~~~   61 (242)
T 4b79_A            6 HDIYAGQQVLVTGGSSGIGAAIAMQFAELGA---EVVALGLDADGVH---------------------APRHPRIRREEL   61 (242)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTSTT---------------------SCCCTTEEEEEC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHh---------------------hhhcCCeEEEEe
Confidence            3457899999999999999999999999996   7888888754211                     111357889999


Q ss_pred             ccCCCCCCCChhHHHHH---hccccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         85 DILQANLGIKDSDLLML---QEEVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~---~~~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      |+++++      +++++   +.++|++|||||....     .++|+.++++|+.+++.+.+++.++  ++..++|++|
T Consensus        62 Dv~~~~------~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnis  133 (242)
T 4b79_A           62 DITDSQ------RLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIA  133 (242)
T ss_dssp             CTTCHH------HHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEEC
T ss_pred             cCCCHH------HHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence            999965      45544   4589999999997652     5678889999999999999988653  1236788875

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.74  E-value=3.2e-17  Score=116.76  Aligned_cols=112  Identities=16%  Similarity=0.186  Sum_probs=88.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++.+|+....                        ....+.++.+|++
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~------------------------~~~~~~~~~~Dv~   78 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNY---RVVATSRSIKPS------------------------ADPDIHTVAGDIS   78 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSCCCC------------------------SSTTEEEEESCTT
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChhhc------------------------ccCceEEEEccCC
Confidence            5789999999999999999999999996   788888865421                        0246889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+.++..+++|+.++.++++++.+   ..+.+++|+
T Consensus        79 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~  152 (260)
T 3un1_A           79 KPE------TADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVS  152 (260)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            865      4555543       7999999999753       2567788999999999999998843   224578888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       153 is  154 (260)
T 3un1_A          153 IT  154 (260)
T ss_dssp             EC
T ss_pred             Ee
Confidence            75

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.74  E-value=1.6e-17  Score=121.87  Aligned_cols=115  Identities=23%  Similarity=0.168  Sum_probs=88.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+|+||++++++|++.|+   .|++++|+....  .+.+                . ...++.++.+|+
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~--~~~l----------------~-~~~~~~~~~~Dl   75 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGD---KVVGIDNFATGR--REHL----------------K-DHPNLTFVEGSI   75 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCC--GGGS----------------C-CCTTEEEEECCT
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEECCCccc--hhhH----------------h-hcCCceEEEEeC
Confidence            36789999999999999999999999986   788888865321  0000                0 014688899999


Q ss_pred             CCCCCCCChhHHHHHhcc--ccEEEeccccccch--hhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEE--VSVVFNGAASLKLE--AELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~--~d~vi~~a~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++++      ++.+++++  +|+|||+||.....  .++.  +++|+.++.++++++.+. ++++||++|
T Consensus        76 ~d~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~S  136 (333)
T 2q1w_A           76 ADHA------LVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYFQ  136 (333)
T ss_dssp             TCHH------HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred             CCHH------HHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEEC
Confidence            9854      68888877  99999999976541  3333  899999999999999987 678999986

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.74  E-value=7.3e-18  Score=122.50  Aligned_cols=107  Identities=23%  Similarity=0.251  Sum_probs=88.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +|+|+||||+|+||++++++|++.|+   .|++++|++...   +                     ..++.++.+|++ +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~---~---------------------~~~~~~~~~Dl~-~   53 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGN---TPIILTRSIGNK---A---------------------INDYEYRVSDYT-L   53 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCC-----------------------------CCEEEECCCC-H
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCCCCcc---c---------------------CCceEEEEcccc-H
Confidence            47999999999999999999999986   789999973211   0                     126788999998 6


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++++|+|||+|+..... ++...+++|+.++.++++++.+. ++++|||+|
T Consensus        54 ~------~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~S  108 (311)
T 3m2p_A           54 E------DLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYAS  108 (311)
T ss_dssp             H------HHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             H------HHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence            5      6888999999999999987644 56668899999999999999997 688999986

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.74  E-value=6.1e-17  Score=115.90  Aligned_cols=122  Identities=16%  Similarity=0.116  Sum_probs=91.9

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      |...+++++++||||+|+||++++++|+++|+   +|++.+|+..  .+.+...++                ..++.++.
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~----------------~~~~~~~~   63 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGA---RVVLADLPET--DLAGAAASV----------------GRGAVHHV   63 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTS--CHHHHHHHH----------------CTTCEEEE
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEcCCHH--HHHHHHHHh----------------CCCeEEEE
Confidence            33457889999999999999999999999996   7788888754  333332222                25678889


Q ss_pred             cccCCCCCCCChhHHHHHhc-------cccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CC
Q psy11862         84 GDILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KK  144 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~  144 (152)
                      +|+++++      ++.++++       ++|++|||||...         ..+.|+..+++|+.+++++++++.+.   .+
T Consensus        64 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  137 (271)
T 3tzq_B           64 VDLTNEV------SVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG  137 (271)
T ss_dssp             CCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            9999854      4555544       7899999999762         24667889999999999999998431   24


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      .+++|++|
T Consensus       138 ~g~iv~is  145 (271)
T 3tzq_B          138 GGAIVNIS  145 (271)
T ss_dssp             CEEEEEEC
T ss_pred             CCEEEEEC
Confidence            57888876

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.74  E-value=2.6e-17  Score=117.03  Aligned_cols=119  Identities=18%  Similarity=0.204  Sum_probs=89.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++.+|+..  ...+...++                ...+.++.+|+
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~----------------~~~~~~~~~D~   63 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGA---TVAIADIDIE--RARQAAAEI----------------GPAAYAVQMDV   63 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHH----------------CTTEEEEECCT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh----------------CCCceEEEeeC
Confidence            37789999999999999999999999996   6788887532  111111111                25678899999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~  148 (152)
                      ++++      ++.++++       ++|++|||||...       ..+.++..+++|+.+++++++++.+.    +...++
T Consensus        64 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~i  137 (259)
T 4e6p_A           64 TRQD------SIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKI  137 (259)
T ss_dssp             TCHH------HHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence            9854      4555544       7999999999753       25678889999999999999988643    114588


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       138 v~is  141 (259)
T 4e6p_A          138 INMA  141 (259)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8876

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.74  E-value=1.4e-17  Score=119.37  Aligned_cols=121  Identities=18%  Similarity=0.219  Sum_probs=90.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++.+|+..  ...+..+++..             ...++.++.+|++
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dv~   85 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAGA---RILINGTDPS--RVAQTVQEFRN-------------VGHDAEAVAFDVT   85 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEECCSCHH--HHHHHHHHHHH-------------TTCCEEECCCCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence            6889999999999999999999999996   7788887532  22222222211             1357889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+.|+..+++|+.+++++++++.+.   .+.+++|+
T Consensus        86 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~  159 (271)
T 4ibo_A           86 SES------EIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVN  159 (271)
T ss_dssp             CHH------HHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            854      4555543       7899999999753       25678889999999999998887653   24468888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       160 is  161 (271)
T 4ibo_A          160 IG  161 (271)
T ss_dssp             EC
T ss_pred             Ec
Confidence            76

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.74  E-value=2.4e-17  Score=116.88  Aligned_cols=121  Identities=11%  Similarity=0.043  Sum_probs=91.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..  .+.+...++..             ...++.++.+|++
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dv~   66 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGF---TVFAGRRNGE--KLAPLVAEIEA-------------AGGRIVARSLDAR   66 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTC---EEEEEESSGG--GGHHHHHHHHH-------------TTCEEEEEECCTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEECcCC
Confidence            6789999999999999999999999996   7888888654  22332222221             1367899999999


Q ss_pred             CCCCCCChhHHHHHhc------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQE------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      ++.++++      ++|++|||||...       ..+.+...+++|+.+++++++++.+.   .+.+++|++
T Consensus        67 ~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i  140 (252)
T 3h7a_A           67 NED------EVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFT  140 (252)
T ss_dssp             CHH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CHH------HHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            954      4555554      7899999999753       25677889999999999999987542   234688887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       141 s  141 (252)
T 3h7a_A          141 G  141 (252)
T ss_dssp             E
T ss_pred             C
Confidence            5

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.74  E-value=3.7e-17  Score=116.19  Aligned_cols=122  Identities=16%  Similarity=0.156  Sum_probs=90.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .|++++++||||+|+||++++++|+++|+   +|++++|+..  ...+...++.             ....++.++.+|+
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~-------------~~~~~~~~~~~Dv   64 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGA---RVVITGRTKE--KLEEAKLEIE-------------QFPGQILTVQMDV   64 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHC-------------CSTTCEEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHH-------------hcCCcEEEEEccC
Confidence            47789999999999999999999999996   6788888532  1122222221             1235788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcce
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~  148 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.|+..+++|+.+++++.+++.+    .+...++
T Consensus        65 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~i  138 (257)
T 3imf_A           65 RNTD------DIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNI  138 (257)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEE
Confidence            9964      454444       37899999999643       2567888999999999999998843    2235688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       139 v~is  142 (257)
T 3imf_A          139 INMV  142 (257)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.74  E-value=2e-17  Score=121.30  Aligned_cols=120  Identities=29%  Similarity=0.369  Sum_probs=90.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh-CCCC--cEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS-CPDI--GKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~-g~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |+++||||+|+||++++++|++. ++++  ..|++++|....... +.+..+.              ...++.++.+|++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~   65 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLAPVD--------------ADPRLRFVHGDIR   65 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGGGGT--------------TCTTEEEEECCTT
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch-hhhhhcc--------------cCCCeEEEEcCCC
Confidence            47999999999999999999996 3220  278888886432111 1111110              1257889999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.+++.++|+|||+||....   ..++..++++|+.++.++++++.+. ++++||++|
T Consensus        66 d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~S  126 (337)
T 1r6d_A           66 DAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVS  126 (337)
T ss_dssp             CHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             CHH------HHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence            854      688888999999999997653   2456678999999999999999997 678999986

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.74  E-value=5.5e-18  Score=117.50  Aligned_cols=104  Identities=18%  Similarity=0.243  Sum_probs=86.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC-C
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ-A   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~   89 (152)
                      |+|+||||+|+||++++++|++.|+   +|++++|+....                       ....++.++.+|+++ +
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~-----------------------~~~~~~~~~~~D~~d~~   54 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDY---QIYAGARKVEQV-----------------------PQYNNVKAVHFDVDWTP   54 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSC---EEEEEESSGGGS-----------------------CCCTTEEEEECCTTSCH
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCccch-----------------------hhcCCceEEEecccCCH
Confidence            4799999999999999999999986   788999865311                       001578999999998 5


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++++|+|||+||...     ...+++|+.++.++++++.+. ++++||++|
T Consensus        55 ~------~~~~~~~~~d~vi~~ag~~~-----~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~S  105 (219)
T 3dqp_A           55 E------EMAKQLHGMDAIINVSGSGG-----KSLLKVDLYGAVKLMQAAEKA-EVKRFILLS  105 (219)
T ss_dssp             H------HHHTTTTTCSEEEECCCCTT-----SSCCCCCCHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             H------HHHHHHcCCCEEEECCcCCC-----CCcEeEeHHHHHHHHHHHHHh-CCCEEEEEC
Confidence            4      68889999999999999764     226789999999999999987 688999987

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.74  E-value=2.8e-17  Score=120.87  Aligned_cols=116  Identities=22%  Similarity=0.271  Sum_probs=90.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhh--CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRS--CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +|+++||||+|+||++++++|++.  |+   .|++++|+...... +.+..+               ...++.++.+|++
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~~~-~~~~~~---------------~~~~~~~~~~Dl~   64 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDV---HVTVLDKLTYAGNK-ANLEAI---------------LGDRVELVVGDIA   64 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTC---EEEEEECCCTTCCG-GGTGGG---------------CSSSEEEEECCTT
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCC---EEEEEeCCCCCCCh-hHHhhh---------------ccCCeEEEECCCC
Confidence            479999999999999999999998  54   78888886532111 111110               0257889999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.++++++|+|||+||....   ..++...+++|+.++.++++++.+. ++ +||++|
T Consensus        65 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~S  124 (348)
T 1oc2_A           65 DAE------LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVS  124 (348)
T ss_dssp             CHH------HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEE
T ss_pred             CHH------HHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEec
Confidence            854      688899999999999997653   3456778999999999999999987 56 999876

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.74  E-value=4.4e-17  Score=115.14  Aligned_cols=121  Identities=17%  Similarity=0.157  Sum_probs=89.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+..+++..             ...++.++.+|++
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   70 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINAD--AANHVVDEIQQ-------------LGGQAFACRCDIT   70 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHH--HHHHHHHHHHH-------------hCCceEEEEcCCC
Confidence            6789999999999999999999999986   6788888532  11111112111             1256888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      ++.++++       ++|++||+||....      .+.+...+++|+.++.++++++.+.   .+.++||++
T Consensus        71 ~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~  144 (255)
T 1fmc_A           71 SEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI  144 (255)
T ss_dssp             CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            854      4555554       89999999997542      4567789999999999999988631   245788887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       145 s  145 (255)
T 1fmc_A          145 T  145 (255)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.73  E-value=5.4e-18  Score=120.79  Aligned_cols=108  Identities=18%  Similarity=0.151  Sum_probs=90.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|++.|+   .|++++|+.....                        ..++.++.+|++++
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~------------------------~~~~~~~~~Dl~d~   54 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAH---EVRLSDIVDLGAA------------------------EAHEEIVACDLADA   54 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEE---EEEECCSSCCCCC------------------------CTTEEECCCCTTCH
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCCCcccc------------------------CCCccEEEccCCCH
Confidence            46899999999999999999999985   7889998754210                        13567889999885


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++++|+|||+||.. ...++...+++|+.++.++++++.+. ++++||++|
T Consensus        55 ~------~~~~~~~~~d~vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~S  109 (267)
T 3ay3_A           55 Q------AVHDLVKDCDGIIHLGGVS-VERPWNDILQANIIGAYNLYEAARNL-GKPRIVFAS  109 (267)
T ss_dssp             H------HHHHHHTTCSEEEECCSCC-SCCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             H------HHHHHHcCCCEEEECCcCC-CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeC
Confidence            4      6888899999999999976 34567789999999999999999986 678999886

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.73  E-value=7.4e-17  Score=114.66  Aligned_cols=119  Identities=16%  Similarity=0.173  Sum_probs=90.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++++|+..  ...+..+++                ..++.++.+|+
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~~----------------~~~~~~~~~D~   67 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGA---SAVLLDLPNS--GGEAQAKKL----------------GNNCVFAPADV   67 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTS--SHHHHHHHH----------------CTTEEEEECCT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcH--hHHHHHHHh----------------CCceEEEEcCC
Confidence            36789999999999999999999999986   7788888754  223222221                24688999999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEecccccc-------------chhhHHHHHHhhhHHHHHHHHHHHhc---C
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------------LEAELKENVAANTRGTQRLLDIALKM---K  143 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~---~  143 (152)
                      ++++      ++.++++       ++|++||+||...             ..+.+...+++|+.++.++++++.+.   .
T Consensus        68 ~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  141 (265)
T 2o23_A           68 TSEK------DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQN  141 (265)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred             CCHH------HHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            9854      4555554       7999999999652             23567789999999999999998753   1


Q ss_pred             ------CCcceEecC
Q psy11862        144 ------KLVVSLDIG  152 (152)
Q Consensus       144 ------~~~~~v~~S  152 (152)
                            +.++||++|
T Consensus       142 ~~~~~~~~~~iv~is  156 (265)
T 2o23_A          142 EPDQGGQRGVIINTA  156 (265)
T ss_dssp             CCCTTSCCEEEEEEC
T ss_pred             ccccCCCCcEEEEeC
Confidence                  346788876

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.73  E-value=2.3e-17  Score=118.26  Aligned_cols=120  Identities=18%  Similarity=0.156  Sum_probs=89.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+.   ...+...++..             ...++.++.+|++
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~---~~~~~~~~~~~-------------~~~~~~~~~~Dv~   89 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGA---HVLAWGRTD---GVKEVADEIAD-------------GGGSAEAVVADLA   89 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESST---HHHHHHHHHHT-------------TTCEEEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCHH---HHHHHHHHHHh-------------cCCcEEEEEecCC
Confidence            6789999999999999999999999996   677777642   22222222221             1367889999999


Q ss_pred             CCCCCCChhHHHHHh------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQ------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      ++.++.      .++|++|||||...       ..+.|+..+++|+.+++++++++.+.   .+.+++|++
T Consensus        90 d~~------~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~i  163 (273)
T 3uf0_A           90 DLE------GAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTI  163 (273)
T ss_dssp             CHH------HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CHH------HHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            865      343332      37899999999764       25677889999999999999988532   245688887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       164 s  164 (273)
T 3uf0_A          164 A  164 (273)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.73  E-value=4e-17  Score=115.76  Aligned_cols=121  Identities=17%  Similarity=0.192  Sum_probs=88.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..  ...+..+.+..             ...++.++.+|++
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~D~~   72 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGA---RVIIADLDEA--MATKAVEDLRM-------------EGHDVSSVVMDVT   72 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEecCC
Confidence            6789999999999999999999999986   7888888532  11111122111             1257889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      ++.++++       ++|++||+||...        ..+.+...+++|+.++.++++++.+.   .+.+++|
T Consensus        73 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv  146 (260)
T 3awd_A           73 NTE------SVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIV  146 (260)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEE
Confidence            854      4555543       7899999999653        14556778999999999999988652   2456888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       147 ~~s  149 (260)
T 3awd_A          147 AIG  149 (260)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.73  E-value=3.3e-17  Score=115.82  Aligned_cols=121  Identities=17%  Similarity=0.207  Sum_probs=89.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  .+.+...++..             ...++.++.+|+
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dv   65 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGA---AVAIAARRVE--KLRALGDELTA-------------AGAKVHVLELDV   65 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEECCC
Confidence            46789999999999999999999999986   6788888532  11111111111             125788899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++|||||...       ..++++..+++|+.++.++++++.+.   .+ +++|
T Consensus        66 ~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv  138 (247)
T 2jah_A           66 ADRQ------GVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVV  138 (247)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEE
Confidence            9854      454444       37899999999653       24667889999999999999988642   23 6888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       139 ~is  141 (247)
T 2jah_A          139 QMS  141 (247)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.73  E-value=1e-17  Score=120.94  Aligned_cols=117  Identities=18%  Similarity=0.280  Sum_probs=92.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++.+|+..      .......            ....++.++.+|++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dl~   72 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGA---TVIMAVRDTR------KGEAAAR------------TMAGQVEVRELDLQ   72 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHT------------TSSSEEEEEECCTT
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH------------HhcCCeeEEEcCCC
Confidence            6789999999999999999999999986   7888888532      2222211            11357899999999


Q ss_pred             CCCCCCChhHHHHHhc---cccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE---EVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.++++   ++|++|||||....     .+.++..+++|+.++.++++++.+. ..+++|++|
T Consensus        73 d~~------~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~is  138 (291)
T 3rd5_A           73 DLS------SVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVS  138 (291)
T ss_dssp             CHH------HHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEEC
T ss_pred             CHH------HHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEee
Confidence            854      6776665   67999999997542     4667789999999999999999886 356888876

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.73  E-value=3.5e-17  Score=117.61  Aligned_cols=128  Identities=17%  Similarity=0.168  Sum_probs=92.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC------CHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL------TPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++++|++...      ...+.+.+...     .+    .....++.
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~   74 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGA---DIAICDRCENSDVVGYPLATADDLAETVA-----LV----EKTGRRCI   74 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCSSCCCCHHHHHHHHH-----HH----HHTTCCEE
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCccccccccccccHHHHHHHHH-----HH----HhcCCeEE
Confidence            47889999999999999999999999996   688888864321      01222222111     00    11236788


Q ss_pred             EEEcccCCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---C
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---K  143 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~  143 (152)
                      ++.+|+++++      ++.++++       ++|++|||||...       ..+.++..+++|+.+++++++++.+.   .
T Consensus        75 ~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~  148 (281)
T 3s55_A           75 SAKVDVKDRA------ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR  148 (281)
T ss_dssp             EEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence            9999999954      4554443       7899999999754       25678889999999999999997541   2


Q ss_pred             CCcceEecC
Q psy11862        144 KLVVSLDIG  152 (152)
Q Consensus       144 ~~~~~v~~S  152 (152)
                      +..++|++|
T Consensus       149 ~~g~iv~is  157 (281)
T 3s55_A          149 NYGRIVTVS  157 (281)
T ss_dssp             TCEEEEEEC
T ss_pred             CCCEEEEEC
Confidence            456888876

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.73  E-value=5.2e-17  Score=116.21  Aligned_cols=121  Identities=17%  Similarity=0.202  Sum_probs=89.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH-HHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|+..  ...+.+ ..+..             ...++.++.+|+
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~---~V~~~~~~~~--~~~~~~~~~~~~-------------~~~~~~~~~~D~   87 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGA---KVAVNYASSA--GAADEVVAAIAA-------------AGGEAFAVKADV   87 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCCh--HHHHHHHHHHHh-------------cCCcEEEEECCC
Confidence            6789999999999999999999999996   6677776432  111111 11111             135788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +|++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+.   .+.++||
T Consensus        88 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv  161 (269)
T 4dmm_A           88 SQES------EVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRII  161 (269)
T ss_dssp             TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence            9964      454444       37899999999764       25678889999999999999988542   2456888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       162 ~is  164 (269)
T 4dmm_A          162 NIA  164 (269)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            876

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.73  E-value=5.2e-17  Score=114.69  Aligned_cols=122  Identities=16%  Similarity=0.232  Sum_probs=88.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+|+||++++++|+++|+   +|++.+|+... ...+..+.+..             ...++.++.+|++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~Dv~   64 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGY---NVAVNYAGSKE-KAEAVVEEIKA-------------KGVDSFAIQANVA   64 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH-HHHHHHHHHHH-------------TTSCEEEEECCTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCHH-HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence            4578999999999999999999999996   66666664320 11111111111             1357889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..++|+..+++|+.++.++++++.+.   .+.+++|+
T Consensus        65 d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~  138 (246)
T 3osu_A           65 DAD------EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIIN  138 (246)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            854      4555443       7899999999753       25678889999999999999998431   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       139 is  140 (246)
T 3osu_A          139 LS  140 (246)
T ss_dssp             EC
T ss_pred             Ec
Confidence            76

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.73  E-value=3.6e-17  Score=119.76  Aligned_cols=119  Identities=24%  Similarity=0.174  Sum_probs=91.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++|+||||+|+||++++++|++.|+   .|++++|+..... .+.+..+.              ...++.++.+|+++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-~~~~~~~~--------------~~~~~~~~~~Dl~d   74 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGY---RVHGLVARRSSDT-RWRLRELG--------------IEGDIQYEDGDMAD   74 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCC-CHHHHHTT--------------CGGGEEEEECCTTC
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCCcccc-ccchhhcc--------------ccCceEEEECCCCC
Confidence            467999999999999999999999986   7888998764321 11222110              02468889999988


Q ss_pred             CCCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCC-cceEecC
Q psy11862         89 ANLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKL-VVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~S  152 (152)
                      ++      ++.+++++  +|+|||+||....   ..++...+++|+.++.++++++.+. ++ ++||++|
T Consensus        75 ~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~S  137 (335)
T 1rpn_A           75 AC------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQAS  137 (335)
T ss_dssp             HH------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEE
T ss_pred             HH------HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEe
Confidence            54      67777774  6999999997653   3467778999999999999999987 54 7999886

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.73  E-value=6e-17  Score=114.56  Aligned_cols=120  Identities=13%  Similarity=0.137  Sum_probs=88.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+.. ....+.+..                ...++.++.+|+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~-~~~~~~~~~----------------~~~~~~~~~~Dv   63 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGA---DIAIADLVPA-PEAEAAIRN----------------LGRRVLTVKCDV   63 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCC-HHHHHHHHH----------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCch-hHHHHHHHh----------------cCCcEEEEEeec
Confidence            36789999999999999999999999986   6788888642 111111111                125688899999


Q ss_pred             CCCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.++       +.++|++|||||...       ..+.++..+++|+.++.++.+++.+.   .+.+++|
T Consensus        64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv  137 (249)
T 2ew8_A           64 SQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRII  137 (249)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEE
Confidence            9854      45444       347899999999753       24667889999999999998886431   2457888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       138 ~is  140 (249)
T 2ew8_A          138 NLT  140 (249)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.73  E-value=4.8e-17  Score=116.42  Aligned_cols=122  Identities=15%  Similarity=0.145  Sum_probs=89.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++..             ...++.++.+|+
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl   89 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS---KLVLWDINKH--GLEETAAKCKG-------------LGAKVHTFVVDC   89 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEEcCHH--HHHHHHHHHHh-------------cCCeEEEEEeeC
Confidence            47889999999999999999999999986   6788888532  11111111111             125788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++||+||....       .+.+...+++|+.++.++++++.+.   .+.++||
T Consensus        90 ~~~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv  163 (272)
T 1yb1_A           90 SNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIV  163 (272)
T ss_dssp             TCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence            9854      454444       378999999997542       3566779999999999988887542   2567898


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       164 ~is  166 (272)
T 1yb1_A          164 TVA  166 (272)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            876

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.73  E-value=7.3e-17  Score=116.83  Aligned_cols=122  Identities=22%  Similarity=0.230  Sum_probs=91.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+|+||++++++|++.|+   +|++++|+..  .+.+...++...            ...++.++.+|++
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~l~~~------------~~~~~~~~~~Dv~  101 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGA---NVAVAARSPR--ELSSVTAELGEL------------GAGNVIGVRLDVS  101 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSGG--GGHHHHHHHTTS------------SSSCEEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHhh------------CCCcEEEEEEeCC
Confidence            6789999999999999999999999996   7788888654  223333333211            1257889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++|||||...       ..+.|+..+++|+.+++++++++.+   ..+.++||+
T Consensus       102 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~  175 (293)
T 3rih_A          102 DPG------SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVIL  175 (293)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            854      444443       47899999999753       2567888999999999999999852   124578888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       176 is  177 (293)
T 3rih_A          176 TS  177 (293)
T ss_dssp             EC
T ss_pred             Ee
Confidence            76

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.73  E-value=1e-16  Score=113.65  Aligned_cols=119  Identities=18%  Similarity=0.185  Sum_probs=89.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..    .+...++..             ...++.++.+|++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~----~~~~~~l~~-------------~~~~~~~~~~D~~   61 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGA---NIVLNGFGDP----APALAEIAR-------------HGVKAVHHPADLS   61 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEECSSCC----HHHHHHHHT-------------TSCCEEEECCCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCch----HHHHHHHHh-------------cCCceEEEeCCCC
Confidence            5789999999999999999999999986   6788888653    222222211             1256888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+.++..+++|+.+++++.+++.+   ..+.++||+
T Consensus        62 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~  135 (255)
T 2q2v_A           62 DVA------QIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIIN  135 (255)
T ss_dssp             SHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            854      5655554       7999999999653       2466788999999999988887743   124578998


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       136 is  137 (255)
T 2q2v_A          136 IA  137 (255)
T ss_dssp             EC
T ss_pred             Ec
Confidence            76

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.73  E-value=4.5e-17  Score=117.08  Aligned_cols=122  Identities=15%  Similarity=0.132  Sum_probs=88.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++++|+..  ...+...++..             ...++.++.+|+
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dv   82 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGI---AVYGCARDAK--NVSAAVDGLRA-------------AGHDVDGSSCDV   82 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHT-------------TTCCEEEEECCT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEECCC
Confidence            35678999999999999999999999996   6788888532  12222222211             136788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-----CCCcc
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-----KKLVV  147 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~  147 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+.     .+.++
T Consensus        83 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~  156 (279)
T 3sju_A           83 TSTD------EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGR  156 (279)
T ss_dssp             TCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcE
Confidence            9854      454444       37899999999754       25667889999999999999988651     24568


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       157 iV~is  161 (279)
T 3sju_A          157 IVNIA  161 (279)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            88876

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.73  E-value=7.3e-17  Score=115.21  Aligned_cols=122  Identities=16%  Similarity=0.156  Sum_probs=90.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++.+|+..  .+.+...++..            ....++.++.+|++
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~------------~~~~~~~~~~~Dv~   80 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGA---RLVLSGRDVS--ELDAARRALGE------------QFGTDVHTVAIDLA   80 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH------------HHCCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH------------hcCCcEEEEEecCC
Confidence            6789999999999999999999999996   6788888532  11222222111            01367899999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v  149 (152)
                      +++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+.    +...++|
T Consensus        81 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv  154 (266)
T 4egf_A           81 EPD------APAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAII  154 (266)
T ss_dssp             STT------HHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            976      344443       47899999999754       25667889999999999999988642    1245888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       155 ~is  157 (266)
T 4egf_A          155 TVA  157 (266)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.73  E-value=2e-16  Score=113.56  Aligned_cols=122  Identities=22%  Similarity=0.205  Sum_probs=92.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++.+|+..  ...+...++..             ...++.++.+|+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dv   91 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGA---HVILHGVKPG--STAAVQQRIIA-------------SGGTAQELAGDL   91 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSTT--TTHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCHH--HHHHHHHHHHh-------------cCCeEEEEEecC
Confidence            36889999999999999999999999996   7888888754  22333333221             136788999999


Q ss_pred             CCCCCCCChhHHHHHh------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         87 LQANLGIKDSDLLMLQ------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      ++++      ++.+++      .++|++|||||...       ..+.++..+++|+.+++++++++.+.   .+..++|+
T Consensus        92 ~~~~------~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~  165 (275)
T 4imr_A           92 SEAG------AGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVS  165 (275)
T ss_dssp             TSTT------HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            9976      344444      37899999999643       25677889999999999999998542   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       166 is  167 (275)
T 4imr_A          166 IG  167 (275)
T ss_dssp             EC
T ss_pred             EC
Confidence            76

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.73  E-value=6.1e-17  Score=115.03  Aligned_cols=122  Identities=14%  Similarity=0.104  Sum_probs=90.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++.+|+..  ...+....+..             ...++.++.+|+
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dv   70 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGA---SVVVTDLKSE--GAEAVAAAIRQ-------------AGGKAIGLECNV   70 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTC---EEEEEESSHH--HHHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEECCC
Confidence            37889999999999999999999999996   6788887532  11221122211             136788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +|++      ++.+++       .++|++|||||....      .+.++..+++|+.+++++++++.+.   .+..++|+
T Consensus        71 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~  144 (256)
T 3gaf_A           71 TDEQ------HREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILN  144 (256)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            9854      444444       378999999997542      4677889999999999999998542   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       145 is  146 (256)
T 3gaf_A          145 IS  146 (256)
T ss_dssp             EC
T ss_pred             Ec
Confidence            76

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.73  E-value=2.8e-17  Score=117.18  Aligned_cols=123  Identities=14%  Similarity=0.190  Sum_probs=90.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|+++|+   +|+++.|..... .+.+...++.             ....++.++.+|+
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~Dv   72 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESV---NLVLHYHQAKDSDTANKLKDELE-------------DQGAKVALYQSDL   72 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSC---EEEEEESCGGGHHHHHHHHHHHH-------------TTTCEEEEEECCC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecCccCHHHHHHHHHHHH-------------hcCCcEEEEECCC
Confidence            7889999999999999999999999986   677777643211 1111111221             1136788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI  151 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~  151 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+. .+.+++|++
T Consensus        73 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i  146 (262)
T 3ksu_A           73 SNEE------EVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI  146 (262)
T ss_dssp             CSHH------HHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence            9955      455544       37899999999653       25677889999999999999999874 233578877


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       147 s  147 (262)
T 3ksu_A          147 A  147 (262)
T ss_dssp             C
T ss_pred             e
Confidence            5

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.73  E-value=6.5e-17  Score=116.18  Aligned_cols=129  Identities=16%  Similarity=0.101  Sum_probs=92.1

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-------CHHHHHHHHhcChhhhhhhhhccccCCc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-------TPKARLAEFSKLPVFERLRKECPAQLSR   78 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (152)
                      ..+++++++||||+|+||++++++|+++|+   +|++++|+....       ...+.+++...         .......+
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~   78 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGA---DIIACDICAPVSASVTYAPASPEDLDETAR---------LVEDQGRK   78 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCCTTCCSCCCCHHHHHHHHH---------HHHTTTCC
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeccccccccccccccCHHHHHHHHH---------HHHhcCCe
Confidence            347889999999999999999999999996   778888743110       01222322211         01112467


Q ss_pred             EEEEEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--
Q psy11862         79 LHIIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--  142 (152)
Q Consensus        79 ~~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--  142 (152)
                      +.++.+|+++++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+.  
T Consensus        79 ~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~  152 (280)
T 3pgx_A           79 ALTRVLDVRDDA------ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMI  152 (280)
T ss_dssp             EEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            889999999854      455444       37899999999754       25677889999999999999998542  


Q ss_pred             --CCCcceEecC
Q psy11862        143 --KKLVVSLDIG  152 (152)
Q Consensus       143 --~~~~~~v~~S  152 (152)
                        +...+||++|
T Consensus       153 ~~~~~g~iv~is  164 (280)
T 3pgx_A          153 EAGNGGSIVVVS  164 (280)
T ss_dssp             HHCSCEEEEEEC
T ss_pred             hcCCCCEEEEEc
Confidence              1246788876

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.73  E-value=2.9e-17  Score=117.60  Aligned_cols=123  Identities=17%  Similarity=0.125  Sum_probs=90.3

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||++++++|++.|+   +|++.+|+..  ...+....+..             ...++..+.+|
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D   85 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGA---MVIGTATTEA--GAEGIGAAFKQ-------------AGLEGRGAVLN   85 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHH--HHHHHHHHHHH-------------HTCCCEEEECC
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEEe
Confidence            447889999999999999999999999996   7788888532  11111112111             13567888999


Q ss_pred             cCCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++|++      ++.++++       ++|++|||||...       ..+.|+..+++|+.+++++++++.+.   .+..+|
T Consensus        86 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i  159 (270)
T 3ftp_A           86 VNDAT------AVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRI  159 (270)
T ss_dssp             TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEE
Confidence            99854      4544443       7899999999653       25678889999999999999988642   234678


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       160 v~is  163 (270)
T 3ftp_A          160 VNIT  163 (270)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8876

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.73  E-value=4.1e-17  Score=117.15  Aligned_cols=121  Identities=20%  Similarity=0.203  Sum_probs=89.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+..+++..             ...++.++.+|++
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dv~   81 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGL---RVFVCARGEE--GLRTTLKELRE-------------AGVEADGRTCDVR   81 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEECCCC
Confidence            6789999999999999999999999986   6788888532  11111122111             1256888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-----CCCcce
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-----KKLVVS  148 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~  148 (152)
                      +++      ++.++++       ++|++|||||....       .+.+...+++|+.++.++++++.+.     .+.++|
T Consensus        82 ~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~i  155 (277)
T 2rhc_B           82 SVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI  155 (277)
T ss_dssp             CHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEE
Confidence            854      4544443       78999999996531       4567889999999999999998653     134688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       156 v~is  159 (277)
T 2rhc_B          156 VNIA  159 (277)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8876

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.73  E-value=1e-17  Score=121.47  Aligned_cols=110  Identities=19%  Similarity=0.132  Sum_probs=88.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhh--CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRS--CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +|+++||||+|+||++++++|++.  |+   .|++++|+.....    +.                   .++.++.+|++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~~----~~-------------------~~~~~~~~D~~   55 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTE---NVIASDIRKLNTD----VV-------------------NSGPFEVVNAL   55 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGG---GEEEEESCCCSCH----HH-------------------HSSCEEECCTT
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCC---EEEEEcCCCcccc----cc-------------------CCCceEEecCC
Confidence            478999999999999999999998  76   6788888654210    10                   23567889998


Q ss_pred             CCCCCCChhHHHHHhc--cccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE--EVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.++++  ++|+|||+||....  ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        56 d~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S  117 (312)
T 2yy7_A           56 DFN------QIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPS  117 (312)
T ss_dssp             CHH------HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCE
T ss_pred             CHH------HHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence            854      6888887  89999999997543  3566778999999999999999987 688999986

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.73  E-value=1.5e-16  Score=117.56  Aligned_cols=124  Identities=18%  Similarity=0.199  Sum_probs=93.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-C----HHHHHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-T----PKARLAEFSKLPVFERLRKECPAQLSRLHI   81 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+.... .    +.+...++..             ...++.+
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-------------~g~~~~~  105 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGA---NIVIAAKTAQPHPKLLGTIYTAAEEIEA-------------VGGKALP  105 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESCCSCCSSSCCCHHHHHHHHHH-------------TTCEEEE
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCC---EEEEEECChhhhhhhHHHHHHHHHHHHh-------------cCCeEEE
Confidence            46889999999999999999999999986   788888876531 1    2222222221             1367889


Q ss_pred             EEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC
Q psy11862         82 IEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK  144 (152)
Q Consensus        82 ~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~  144 (152)
                      +.+|+++++      ++.+++       .++|++|||||...       ..+.++.++++|+.+++++++++.+.   .+
T Consensus       106 ~~~Dv~d~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~  179 (346)
T 3kvo_A          106 CIVDVRDEQ------QISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK  179 (346)
T ss_dssp             EECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS
T ss_pred             EEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC
Confidence            999999864      454444       37899999999754       25678889999999999999998642   24


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      ..+||++|
T Consensus       180 ~g~IV~iS  187 (346)
T 3kvo_A          180 VAHILNIS  187 (346)
T ss_dssp             SCEEEEEC
T ss_pred             CCEEEEEC
Confidence            46888876

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.73  E-value=1.7e-16  Score=112.27  Aligned_cols=123  Identities=18%  Similarity=0.188  Sum_probs=89.4

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC-CCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA-KRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      ..+++++++||||+|+||++++++|+++|+   +|++++|+ ..  ...+...++..             ...++.++.+
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~--~~~~~~~~~~~-------------~~~~~~~~~~   64 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGA---KVGLHGRKAPA--NIDETIASMRA-------------DGGDAAFFAA   64 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCCT--THHHHHHHHHH-------------TTCEEEEEEC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEECCCchh--hHHHHHHHHHh-------------cCCceEEEEC
Confidence            347889999999999999999999999986   68888887 32  22222222211             1257889999


Q ss_pred             ccCCCCCCCChhHHHHHhc-------cccEEEecccc-cc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC--
Q psy11862         85 DILQANLGIKDSDLLMLQE-------EVSVVFNGAAS-LK-------LEAELKENVAANTRGTQRLLDIALKM---KK--  144 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~-~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--  144 (152)
                      |+++++      ++.++++       ++|++||+||. ..       ..+.+...+++|+.++.++++++.+.   .+  
T Consensus        65 D~~~~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  138 (258)
T 3afn_B           65 DLATSE------ACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKA  138 (258)
T ss_dssp             CTTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccC
Confidence            999854      5655554       79999999996 22       13557778999999999999887532   01  


Q ss_pred             C---cceEecC
Q psy11862        145 L---VVSLDIG  152 (152)
Q Consensus       145 ~---~~~v~~S  152 (152)
                      .   +++|++|
T Consensus       139 ~~~~~~iv~~s  149 (258)
T 3afn_B          139 SGQTSAVISTG  149 (258)
T ss_dssp             HTSCEEEEEEC
T ss_pred             CCCCcEEEEec
Confidence            1   5788765

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.73  E-value=6.9e-17  Score=114.66  Aligned_cols=118  Identities=19%  Similarity=0.173  Sum_probs=86.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+....  .+...++                ..++.++.+|++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~--~~~~~~~----------------~~~~~~~~~Dv~   63 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGA---TVLGLDLKPPAG--EEPAAEL----------------GAAVRFRNADVT   63 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSCC------------------------------CEEEECCTT
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHH--HHHHHHh----------------CCceEEEEccCC
Confidence            6789999999999999999999999996   678888876421  1111111                246788999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-------
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-------  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-------  142 (152)
                      +++      ++.++++       ++|++|||||...           ..+.+...+++|+.+++++++++.+.       
T Consensus        64 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~  137 (257)
T 3tpc_A           64 NEA------DATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPD  137 (257)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccc
Confidence            854      4554443       7999999999753           14678889999999999999998753       


Q ss_pred             --CCCcceEecC
Q psy11862        143 --KKLVVSLDIG  152 (152)
Q Consensus       143 --~~~~~~v~~S  152 (152)
                        ++..++|++|
T Consensus       138 ~~~~~g~iv~is  149 (257)
T 3tpc_A          138 ADGERGVIVNTA  149 (257)
T ss_dssp             TTSCCEEEEEEC
T ss_pred             CCCCCeEEEEEe
Confidence              1345788875

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.72  E-value=6.8e-17  Score=116.00  Aligned_cols=118  Identities=20%  Similarity=0.229  Sum_probs=87.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+....                ...++.++.+|++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~----------------~~~~~~~~~~Dv~   61 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGD---TVIGTARRTE--ALDDLVAA----------------YPDRAEAISLDVT   61 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSGG--GGHHHHHH----------------CTTTEEEEECCTT
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHh----------------ccCCceEEEeeCC
Confidence            4678999999999999999999999996   7788888643  12221111                1357889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+++...+++|+.++.++.+++.+.   .+.++||+
T Consensus        62 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~  135 (281)
T 3m1a_A           62 DGE------RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVN  135 (281)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            854      4555443       7899999999753       24677889999999977777766431   24678998


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       136 ~s  137 (281)
T 3m1a_A          136 IS  137 (281)
T ss_dssp             EC
T ss_pred             Ec
Confidence            76

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.72  E-value=4.7e-17  Score=116.23  Aligned_cols=121  Identities=17%  Similarity=0.218  Sum_probs=89.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|+..  .+.+...++..             ...++.++.+|++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dv~   63 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGA---KILLGARRQA--RIEAIATEIRD-------------AGGTALAQVLDVT   63 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSHH--HHHHHHHHHHH-------------TTCEEEEEECCTT
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence            4679999999999999999999999996   6788888632  11222222211             1357888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++.+++.+.   .+.+++|+
T Consensus        64 d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~  137 (264)
T 3tfo_A           64 DRH------SVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIIN  137 (264)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            864      444443       37899999999754       25678889999999999999887642   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       138 is  139 (264)
T 3tfo_A          138 IG  139 (264)
T ss_dssp             EC
T ss_pred             Ec
Confidence            76

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.72  E-value=1.3e-16  Score=114.94  Aligned_cols=123  Identities=14%  Similarity=0.210  Sum_probs=92.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-----CHHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-----TPKARLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+....     .+.+...++..             ...++.++
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~   70 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGA---NVALVAKSAEPHPKLPGTIYTAAKEIEE-------------AGGQALPI   70 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTC---EEEEEESCCSCCSSSCCCHHHHHHHHHH-------------HTSEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECChhhhhhhhHHHHHHHHHHHh-------------cCCcEEEE
Confidence            6789999999999999999999999986   788889876431     22222222211             13678999


Q ss_pred             EcccCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC
Q psy11862         83 EGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKL  145 (152)
Q Consensus        83 ~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~  145 (152)
                      .+|+++++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+.   .+.
T Consensus        71 ~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  144 (285)
T 3sc4_A           71 VGDIRDGD------AVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDN  144 (285)
T ss_dssp             ECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSS
T ss_pred             ECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            99999854      454444       37899999999754       25677889999999999999998764   234


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      +++|++|
T Consensus       145 g~iv~is  151 (285)
T 3sc4_A          145 PHILTLS  151 (285)
T ss_dssp             CEEEECC
T ss_pred             cEEEEEC
Confidence            6888876

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.72  E-value=5.5e-17  Score=115.53  Aligned_cols=122  Identities=14%  Similarity=0.181  Sum_probs=89.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++++|+..  ...+...++..             ...++.++.+|+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~   65 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGT---AIALLDMNRE--ALEKAEASVRE-------------KGVEARSYVCDV   65 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHT-------------TTSCEEEEECCT
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEecC
Confidence            46789999999999999999999999986   6788887532  11111111111             135688899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccc-c-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASL-K-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~-~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++++      ++.+++       .++|++|||||.. .       ..+.++..+++|+.+++++++++.+.   .+.+++
T Consensus        66 ~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i  139 (262)
T 1zem_A           66 TSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRI  139 (262)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence            9854      444443       3789999999965 2       24667889999999999999988653   245688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       140 v~is  143 (262)
T 1zem_A          140 VNTA  143 (262)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            8876

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.72  E-value=5.2e-18  Score=121.95  Aligned_cols=107  Identities=14%  Similarity=0.136  Sum_probs=83.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++|+|+||| +|+||++++++|++.|+   .|++++|+....                         ..++.++.+|++
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~---~V~~~~r~~~~~-------------------------~~~~~~~~~Dl~   51 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGH---EVTGLRRSAQPM-------------------------PAGVQTLIADVT   51 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTC---CEEEEECTTSCC-------------------------CTTCCEEECCTT
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCC---EEEEEeCCcccc-------------------------ccCCceEEccCC
Confidence            4578999999 59999999999999987   678888865421                         256788999999


Q ss_pred             CCCCCCChhHHHHHhcc-ccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEE-VSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~-~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.+++++ +|+|||+||...  .++...+++|+.++.++++++.+. ++++||++|
T Consensus        52 d~~------~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~S  108 (286)
T 3gpi_A           52 RPD------TLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVS  108 (286)
T ss_dssp             CGG------GCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEE
T ss_pred             ChH------HHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEc
Confidence            865      46667776 999999998743  456678899999999999999986 688999986

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.72  E-value=2.9e-17  Score=117.59  Aligned_cols=122  Identities=20%  Similarity=0.242  Sum_probs=90.3

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      |.+.+++|+++||||+++||+++++.|++.|+   +|++.+|+..  .+.+...++                ..+...+.
T Consensus        23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga---~V~i~~r~~~--~l~~~~~~~----------------g~~~~~~~   81 (273)
T 4fgs_A           23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGA---RVFITGRRKD--VLDAAIAEI----------------GGGAVGIQ   81 (273)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHH----------------CTTCEEEE
T ss_pred             hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHc----------------CCCeEEEE
Confidence            33457899999999999999999999999996   7888888532  222222221                35678889


Q ss_pred             cccCCCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcce
Q psy11862         84 GDILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVS  148 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~  148 (152)
                      +|+++++      +++++       +.++|++|||||...       ..+.|+..+++|+.+++.+.+++.+. .+-.++
T Consensus        82 ~Dv~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~I  155 (273)
T 4fgs_A           82 ADSANLA------ELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSV  155 (273)
T ss_dssp             CCTTCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEE
T ss_pred             ecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeE
Confidence            9999965      44444       347899999999754       26789999999999999999998763 122467


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       156 Inis  159 (273)
T 4fgs_A          156 VLTG  159 (273)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            7664

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.72  E-value=6.1e-17  Score=114.28  Aligned_cols=122  Identities=19%  Similarity=0.255  Sum_probs=87.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+.. ....+..+++..             ...++.++.+|++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~   64 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGA---NVVVNYAGNE-QKANEVVDEIKK-------------LGSDAIAVRADVA   64 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH-HHHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCH-HHHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence            5689999999999999999999999986   6777777321 011111111111             1256888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+.++..+++|+.+++++.+++.+.   .+.+++|+
T Consensus        65 ~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~  138 (246)
T 2uvd_A           65 NAE------DVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVN  138 (246)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            854      4555443       7999999999753       24567889999999999888887542   24578988


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       139 is  140 (246)
T 2uvd_A          139 IA  140 (246)
T ss_dssp             EC
T ss_pred             EC
Confidence            76

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.72  E-value=8.7e-17  Score=114.12  Aligned_cols=124  Identities=19%  Similarity=0.248  Sum_probs=89.0

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||++++++|++.|+   +|++++|+.. ....+....+..             ...++.++.+|
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~-~~~~~~~~~l~~-------------~~~~~~~~~~D   65 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKA---KVVVNYRSKE-DEANSVLEEIKK-------------VGGEAIAVKGD   65 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH-HHHHHHHHHHHH-------------TTCEEEEEECC
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEcCCCh-HHHHHHHHHHHh-------------cCCceEEEECC
Confidence            347789999999999999999999999986   6788887321 011111111111             12568889999


Q ss_pred             cCCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-Ccc
Q psy11862         86 ILQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LVV  147 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~  147 (152)
                      +++++      ++.++++       ++|++||+||....       .+.+...+++|+.++.++++++.+.   .+ .++
T Consensus        66 ~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~  139 (261)
T 1gee_A           66 VTVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGT  139 (261)
T ss_dssp             TTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCE
Confidence            99854      4555443       78999999996532       4567789999999999998887642   13 468


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      ||++|
T Consensus       140 iv~is  144 (261)
T 1gee_A          140 VINMS  144 (261)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            88876

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.72  E-value=6.5e-17  Score=114.58  Aligned_cols=124  Identities=15%  Similarity=0.121  Sum_probs=89.1

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+....+..            .....+.++.+|
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~D   70 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGA---TVILLGRNEE--KLRQVASHINE------------ETGRQPQWFILD   70 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH------------HHSCCCEEEECC
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh------------hcCCCceEEEEe
Confidence            457899999999999999999999999986   6788888532  11111111111            012467888999


Q ss_pred             c--CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC
Q psy11862         86 I--LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKL  145 (152)
Q Consensus        86 ~--~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~  145 (152)
                      +  ++++      ++.+++       .++|++|||||...        ..+.|+..+++|+.+++++++++.+.   .+.
T Consensus        71 ~~~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~  144 (252)
T 3f1l_A           71 LLTCTSE------NCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDA  144 (252)
T ss_dssp             TTTCCHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSS
T ss_pred             cccCCHH------HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCC
Confidence            9  6643      444443       37899999999742        25667889999999999999998532   245


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      +++|++|
T Consensus       145 g~iv~is  151 (252)
T 3f1l_A          145 GSLVFTS  151 (252)
T ss_dssp             CEEEEEC
T ss_pred             CEEEEEC
Confidence            6888876

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.72  E-value=6.2e-17  Score=114.51  Aligned_cols=121  Identities=15%  Similarity=0.132  Sum_probs=88.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++..             ...++.++.+|++
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   68 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGA---AVVVADINAE--AAEAVAKQIVA-------------DGGTAISVAVDVS   68 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCEEEEEECCTT
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence            6789999999999999999999999986   6788887532  11221222211             1367889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc----------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK----------LEAELKENVAANTRGTQRLLDIALKM---KKLVV  147 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~  147 (152)
                      +++      ++.++++       ++|++|||||...          ..+.+...+++|+.++.++.+++.+.   .+.++
T Consensus        69 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  142 (253)
T 3qiv_A           69 DPE------SAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGA  142 (253)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCE
Confidence            954      4555443       7899999999731          25667889999999988888877542   24568


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      ||++|
T Consensus       143 iv~is  147 (253)
T 3qiv_A          143 IVNQS  147 (253)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            88876

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.72  E-value=7.6e-17  Score=114.79  Aligned_cols=121  Identities=15%  Similarity=0.179  Sum_probs=88.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   .|++++|+..  ...+...++..             ...++.++.+|++
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   73 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA---VIHTCARNEY--ELNECLSKWQK-------------KGFQVTGSVCDAS   73 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeeEEEECCCC
Confidence            5789999999999999999999999986   6788887532  11221122111             1256888999999


Q ss_pred             CCCCCCChhHHHHHh--------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ--------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~--------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      ++.+++        .++|++||+||...       ..+.+...+++|+.++.++++++.+.   .+.+++|
T Consensus        74 ~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv  147 (266)
T 1xq1_A           74 LRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNII  147 (266)
T ss_dssp             SHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            854      454444        57899999999653       24567789999999999999998431   2467888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       148 ~is  150 (266)
T 1xq1_A          148 FMS  150 (266)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.72  E-value=1.2e-16  Score=113.95  Aligned_cols=110  Identities=20%  Similarity=0.241  Sum_probs=87.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+...                          ..++.++.+|++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~--------------------------~~~~~~~~~Dl~   56 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGS---KVIDLSIHDPG--------------------------EAKYDHIECDVT   56 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESSCCC--------------------------SCSSEEEECCTT
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEecCccc--------------------------CCceEEEEecCC
Confidence            7889999999999999999999999986   67888886541                          146778899999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.++||+
T Consensus        57 ~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~  130 (264)
T 2dtx_A           57 NPD------QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVN  130 (264)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            854      4554443       7899999999653       24578889999999999999998652   24578988


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       131 is  132 (264)
T 2dtx_A          131 IS  132 (264)
T ss_dssp             EC
T ss_pred             EC
Confidence            76

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.72  E-value=8.2e-17  Score=115.70  Aligned_cols=125  Identities=21%  Similarity=0.190  Sum_probs=90.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++++|+..  ...+...++...          ......+.++.+|+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~~----------~~~~~~~~~~~~Dv   72 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA---SVMIVGRNPD--KLAGAVQELEAL----------GANGGAIRYEPTDI   72 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHTT----------CCSSCEEEEEECCT
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHHh----------CCCCceEEEEeCCC
Confidence            46789999999999999999999999996   6788887532  222222222211          11123788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++++      ++.+++       .++|++|||||...        ..+.|+..+++|+.+++++++++.+.   .+..+|
T Consensus        73 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~i  146 (281)
T 3svt_A           73 TNED------ETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSF  146 (281)
T ss_dssp             TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence            9854      454444       37899999999622        25667889999999999999988653   234588


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       147 v~is  150 (281)
T 3svt_A          147 VGIS  150 (281)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            8876

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.72  E-value=1.1e-16  Score=114.96  Aligned_cols=121  Identities=14%  Similarity=0.144  Sum_probs=90.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|+..  ...+..+++..             ...++.++.+|++
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dl~   91 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGA---QVAVAARHSD--ALQVVADEIAG-------------VGGKALPIRCDVT   91 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSGG--GGHHHHHHHHH-------------TTCCCEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCeEEEEEcCCC
Confidence            6789999999999999999999999996   7888888643  22222222211             1357888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM----KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v  149 (152)
                      +++      ++.++++       ++|++|||||....       .+.++..+++|+.+++++++++.+.    +...++|
T Consensus        92 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv  165 (276)
T 3r1i_A           92 QPD------QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTII  165 (276)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence            854      4555544       78999999997542       5677889999999999999988642    1125787


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       166 ~is  168 (276)
T 3r1i_A          166 TTA  168 (276)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            765

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.72  E-value=6.7e-17  Score=115.48  Aligned_cols=119  Identities=17%  Similarity=0.252  Sum_probs=88.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+|+||++++++|++.|+   +|++.+|+..      .+.+...            ....++.++.+|+
T Consensus        24 ~l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv   82 (266)
T 3grp_A           24 KLTGRKALVTGATGGIGEAIARCFHAQGA---IVGLHGTRED------KLKEIAA------------DLGKDVFVFSANL   82 (266)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH------------HHCSSEEEEECCT
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH------------HhCCceEEEEeec
Confidence            36789999999999999999999999996   6777777532      2222211            0135788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.|+..+++|+.+++++.+++.+.   .+.++||
T Consensus        83 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv  156 (266)
T 3grp_A           83 SDRK------SIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRII  156 (266)
T ss_dssp             TSHH------HHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence            9965      455444       37899999999754       25678889999999999888887542   2456888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       157 ~is  159 (266)
T 3grp_A          157 NIT  159 (266)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            876

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.72  E-value=6.6e-17  Score=115.16  Aligned_cols=116  Identities=13%  Similarity=0.164  Sum_probs=86.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+.+..                  ..+.++.+|++
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~------------------~~~~~~~~Dv~   81 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGH---RVIISYRTEH--ASVTELRQ------------------AGAVALYGDFS   81 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTC---CEEEEESSCC--HHHHHHHH------------------HTCEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCChH--HHHHHHHh------------------cCCeEEECCCC
Confidence            5788999999999999999999999996   5788888654  22222221                  13678899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      ++.+++       .++|++|||||....      .+.+...+++|+.+++++++++.+.   .+..++|++
T Consensus        82 ~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~i  155 (260)
T 3gem_A           82 CET------GIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHI  155 (260)
T ss_dssp             SHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            854      454444       378999999996532      4567789999999999999988642   245688887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       156 s  156 (260)
T 3gem_A          156 S  156 (260)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.72  E-value=7.2e-17  Score=115.60  Aligned_cols=128  Identities=14%  Similarity=0.152  Sum_probs=86.5

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec-CCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR-AKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      ..|++++++||||+|+||++++++|++.|+   +|++++| +..  ...+...++         ...   ...++.++.+
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~--~~~~~~~~~---------~~~---~~~~~~~~~~   69 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGF---RVVVHYRHSEG--AAQRLVAEL---------NAA---RAGSAVLCKG   69 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHH---------HHH---STTCEEEEEC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCChH--HHHHHHHHH---------HHh---cCCceEEEec
Confidence            346789999999999999999999999986   7788887 421  111111111         100   0256888999


Q ss_pred             ccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------h-----------hhHHHHHHhhhHHHHHHHHHH
Q psy11862         85 DILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------E-----------AELKENVAANTRGTQRLLDIA  139 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~-----------~~~~~~~~~n~~~~~~l~~~~  139 (152)
                      |++++..  ..+++.+++       .++|++|||||....       .           +.++..+++|+.++.++++++
T Consensus        70 Dl~~~~~--~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  147 (276)
T 1mxh_A           70 DLSLSSS--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAF  147 (276)
T ss_dssp             CCSSSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cCCCccc--cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHH
Confidence            9998610  002444444       378999999996532       2           677889999999999999999


Q ss_pred             Hhc--CCC------cceEecC
Q psy11862        140 LKM--KKL------VVSLDIG  152 (152)
Q Consensus       140 ~~~--~~~------~~~v~~S  152 (152)
                      .+.  .+.      ++||++|
T Consensus       148 ~~~~~~~~~~~~~~g~iv~is  168 (276)
T 1mxh_A          148 ARRQGEGGAWRSRNLSVVNLC  168 (276)
T ss_dssp             HHTC-------CCCEEEEEEC
T ss_pred             HHHHhcCCCCCCCCcEEEEEC
Confidence            874  123      6888876

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.72  E-value=8.8e-17  Score=113.19  Aligned_cols=121  Identities=18%  Similarity=0.251  Sum_probs=83.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|++.|+   +|+++ .|++.  ...+....+..             ...++.++.+|+
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~---~V~~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~   64 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA---NIVLNGSPAST--SLDATAEEFKA-------------AGINVVVAKGDV   64 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECTTCS--HHHHHHHHHHH-------------TTCCEEEEESCT
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCcCHH--HHHHHHHHHHh-------------cCCcEEEEECCC
Confidence            5789999999999999999999999986   66777 44322  22222222211             135788999999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.++++       ++|++||+||...       ..+.+...+++|+.++.++++++.+.   .+.++||
T Consensus        65 ~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv  138 (247)
T 2hq1_A           65 KNPE------DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKII  138 (247)
T ss_dssp             TSHH------HHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            9854      4555544       7899999999753       23556779999999999998887642   2457898


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       139 ~~s  141 (247)
T 2hq1_A          139 NIT  141 (247)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.72  E-value=8.8e-17  Score=115.81  Aligned_cols=121  Identities=17%  Similarity=0.133  Sum_probs=89.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++..             ...++.++.+|++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dv~   87 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGV---TVGALGRTRT--EVEEVADEIVG-------------AGGQAIALEADVS   87 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESSHH--HHHHHHHHHTT-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence            5678999999999999999999999986   7788888532  12222222211             2367889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      |++      ++.+++       .++|++|||||...        ..+.|+..+++|+.+++++++++.+.   .+.+++|
T Consensus        88 d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv  161 (283)
T 3v8b_A           88 DEL------QMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIV  161 (283)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEE
Confidence            864      444444       37899999999743        15677889999999999999998431   2457888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       162 ~is  164 (283)
T 3v8b_A          162 VVS  164 (283)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.72  E-value=6.4e-17  Score=120.96  Aligned_cols=125  Identities=20%  Similarity=0.162  Sum_probs=90.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHH-hhCCCCcEEEEeecCCCCC------CHHHHHHHHhcChhhhhhhhhccc-cCCc---
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAKRGL------TPKARLAEFSKLPVFERLRKECPA-QLSR---   78 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~-~~g~~~~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---   78 (152)
                      +|+|+||||+|+||++++++|+ +.|+   .|++++|.....      ...+.+.....        ..... ...+   
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~   70 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNH---SVVIVDSLVGTHGKSDHVETRENVARKLQ--------QSDGPKPPWADRY   70 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC---EEEEEECCTTTTTCCTTSCCHHHHHHHHH--------HSCSSCCTTTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCC---EEEEEecCCcccccccccchHHHHHHHHH--------HhhccccccCCce
Confidence            4689999999999999999999 8886   778888865421      00222221100        00000 0123   


Q ss_pred             EEEEEcccCCCCCCCChhHHHHHhc--c-ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         79 LHIIEGDILQANLGIKDSDLLMLQE--E-VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        79 ~~~~~~D~~~~~~~~~~~~~~~~~~--~-~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.++.+|+++++      .+.++++  + +|+|||+||....   ..++..++++|+.++.++++++.+. ++++||++|
T Consensus        71 ~~~~~~Dl~d~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~S  143 (397)
T 1gy8_A           71 AALEVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSS  143 (397)
T ss_dssp             CEEEESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             EEEEECCCCCHH------HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEEC
Confidence            889999999854      5777776  5 9999999997653   3566779999999999999999887 678999986

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.72  E-value=4.8e-17  Score=118.01  Aligned_cols=109  Identities=21%  Similarity=0.194  Sum_probs=86.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+||||+|+||++++++|++.|+   .|++++|......  +                   .....+.++.+|+.+++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~-------------------~~~~~~~~~~~Dl~d~~   56 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGY---EVVVVDNLSSGRR--E-------------------FVNPSAELHVRDLKDYS   56 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCCSSCCG--G-------------------GSCTTSEEECCCTTSTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC---EEEEEeCCCCCch--h-------------------hcCCCceEEECccccHH
Confidence            5799999999999999999999987   7788888654221  0                   01256888999998864


Q ss_pred             CCCChhHHHHHhccccEEEecccccc---chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLK---LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                             +.+.+++ |+|||+|+...   ...++...+++|+.++.++++++.+. ++++||++|
T Consensus        57 -------~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~S  112 (312)
T 3ko8_A           57 -------WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFAS  112 (312)
T ss_dssp             -------TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             -------HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeC
Confidence                   4445556 99999999643   24567788999999999999999987 688999986

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.72  E-value=1.6e-16  Score=116.56  Aligned_cols=126  Identities=19%  Similarity=0.222  Sum_probs=90.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++||||+||||++++++|++.|+   +|++..|+..+.+ .+.++.+...         ......++.++.+|++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~---~V~~~~r~~~~r~-~~~~~~l~~~---------~~~~~~~~~~~~~Dvt   69 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGH---RVYASMRDIVGRN-ASNVEAIAGF---------ARDNDVDLRTLELDVQ   69 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCTTTTT-HHHHHHHHHH---------HHHHTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEecCcccccC-HHHHHHHHHH---------HHhcCCcEEEEEeecC
Confidence            5678999999999999999999999996   7788888644322 2222222110         0111367899999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..++++.++++|+.++.++++++.+.   .+.+++|+
T Consensus        70 d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~  143 (324)
T 3u9l_A           70 SQV------SVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIW  143 (324)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            854      4555544       8999999999653       25677889999999999999998431   24578888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       144 is  145 (324)
T 3u9l_A          144 IS  145 (324)
T ss_dssp             EC
T ss_pred             Ee
Confidence            76

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.72  E-value=5.5e-17  Score=116.69  Aligned_cols=126  Identities=19%  Similarity=0.149  Sum_probs=88.7

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      |...+++++++||||+|+||++++++|++.|+   +|++++|+.. ....+...++..             ...++.++.
T Consensus        23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~   85 (280)
T 4da9_A           23 MMTQKARPVAIVTGGRRGIGLGIARALAASGF---DIAITGIGDA-EGVAPVIAELSG-------------LGARVIFLR   85 (280)
T ss_dssp             CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCH-HHHHHHHHHHHH-------------TTCCEEEEE
T ss_pred             hhhccCCCEEEEecCCCHHHHHHHHHHHHCCC---eEEEEeCCCH-HHHHHHHHHHHh-------------cCCcEEEEE
Confidence            33346789999999999999999999999996   6777775322 111111122211             136789999


Q ss_pred             cccCCCCCCCChhHHHHHh-------ccccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CC
Q psy11862         84 GDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KK  144 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~  144 (152)
                      +|+++++      ++.+++       .++|++|||||...         ..+.+...+++|+.+++++++++.+.   .+
T Consensus        86 ~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~  159 (280)
T 4da9_A           86 ADLADLS------SHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASD  159 (280)
T ss_dssp             CCTTSGG------GHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred             ecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhC
Confidence            9999976      344444       37899999999732         25678889999999999999988653   11


Q ss_pred             ---CcceEecC
Q psy11862        145 ---LVVSLDIG  152 (152)
Q Consensus       145 ---~~~~v~~S  152 (152)
                         ..+||++|
T Consensus       160 ~~~~g~Iv~is  170 (280)
T 4da9_A          160 ARASRSIINIT  170 (280)
T ss_dssp             CCCCEEEEEEC
T ss_pred             CCCCCEEEEEc
Confidence               45788876

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.72  E-value=7.1e-17  Score=114.93  Aligned_cols=118  Identities=18%  Similarity=0.142  Sum_probs=87.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..      .+......            ...++.++.+|++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~   68 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGA---TVAIADLDVM------AAQAVVAG------------LENGGFAVEVDVT   68 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHHT------------CTTCCEEEECCTT
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHHH------------HhcCCeEEEEeCC
Confidence            5789999999999999999999999986   6788887532      22221110            0125778899999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceE
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-LVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v  149 (152)
                      +++      ++.++++       ++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+ .+++|
T Consensus        69 d~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv  142 (263)
T 3ak4_A           69 KRA------SVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIV  142 (263)
T ss_dssp             CHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            854      4555554       7999999999653       14567889999999999999988652   23 46888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       143 ~is  145 (263)
T 3ak4_A          143 NTA  145 (263)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.72  E-value=9.9e-17  Score=116.34  Aligned_cols=131  Identities=16%  Similarity=0.123  Sum_probs=93.1

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC------CHHHHHHHHhcChhhhhhhhhccccCC
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL------TPKARLAEFSKLPVFERLRKECPAQLS   77 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (152)
                      |...+++++++||||+|+||++++++|++.|+   +|++++|++...      ...+.+.+...     .+    .....
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~   89 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREGA---DIIAIDVCKQLDGVKLPMSTPDDLAETVR-----QV----EALGR   89 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCCSCCCCHHHHHHHHH-----HH----HHTTC
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEecccccccccccccCHHHHHHHHH-----HH----HhcCC
Confidence            33457889999999999999999999999996   778888763211      11222222211     01    11236


Q ss_pred             cEEEEEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         78 RLHIIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        78 ~~~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      ++.++.+|+++++      ++.+++       .++|++|||||...        ..+.++..+++|+.+++++++++.+.
T Consensus        90 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  163 (299)
T 3t7c_A           90 RIIASQVDVRDFD------AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPH  163 (299)
T ss_dssp             CEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            7899999999854      454444       37899999999653        24677889999999999999987642


Q ss_pred             ----CCCcceEecC
Q psy11862        143 ----KKLVVSLDIG  152 (152)
Q Consensus       143 ----~~~~~~v~~S  152 (152)
                          .+..+||++|
T Consensus       164 ~~~~~~~g~Iv~is  177 (299)
T 3t7c_A          164 IMAGKRGGSIVFTS  177 (299)
T ss_dssp             HHHTTSCEEEEEEC
T ss_pred             HHhcCCCcEEEEEC
Confidence                2346888876

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.72  E-value=5.2e-17  Score=115.63  Aligned_cols=119  Identities=18%  Similarity=0.174  Sum_probs=87.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++++|+..      .+.+...     .+       ...+.++.+|+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~~-----~~-------~~~~~~~~~D~   62 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGA---KVVFGDILDE------EGKAMAA-----EL-------ADAARYVHLDV   62 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH-----HT-------GGGEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH-----Hh-------hcCceEEEecC
Confidence            36789999999999999999999999996   6788887532      1211110     00       12477889999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.++++       ++|++|||||....       .+.++..+++|+.++.++.+++.+.   .+.+++|
T Consensus        63 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv  136 (260)
T 1nff_A           63 TQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSII  136 (260)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence            9854      5555554       79999999996532       4567889999999998887776531   2457888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       137 ~is  139 (260)
T 1nff_A          137 NIS  139 (260)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            876

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.72  E-value=2.5e-16  Score=112.13  Aligned_cols=113  Identities=25%  Similarity=0.279  Sum_probs=83.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|.+...|++++|+.....   .+.++...             ..++.++.+|+
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~---~~~~l~~~-------------~~~~~~~~~Dl   81 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK---ELEDLAKN-------------HSNIHILEIDL   81 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH---HHHHHHHH-------------CTTEEEEECCT
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH---HHHHhhcc-------------CCceEEEEecC
Confidence            467899999999999999999999999822127888898765322   22222110             25788999999


Q ss_pred             CCCCCCCChhHHHHHhc---------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         87 LQANLGIKDSDLLMLQE---------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~---------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      ++++      ++.++++         ++|++||+||...        ..+.+...+++|+.++.++++++.+
T Consensus        82 ~~~~------~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  147 (267)
T 1sny_A           82 RNFD------AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLP  147 (267)
T ss_dssp             TCGG------GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CChH------HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHH
Confidence            9865      3554443         6999999999754        1466777999999999999998864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.72  E-value=8.1e-17  Score=115.47  Aligned_cols=128  Identities=14%  Similarity=0.140  Sum_probs=92.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC------CHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL------TPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++++|+....      ...+.+.....     .+    .....++.
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~   77 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGA---DIIAVDLCDQIASVPYPLATPEELAATVK-----LV----EDIGSRIV   77 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCSSCCCCHHHHHHHHH-----HH----HHHTCCEE
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEecccccccccccccchHHHHHHHH-----HH----HhcCCeEE
Confidence            46889999999999999999999999996   678888763211      11222222211     00    11136789


Q ss_pred             EEEcccCCCCCCCChhHHHHHhc-------cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhc----CCCc
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKM----KKLV  146 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~  146 (152)
                      ++.+|+++++      ++.++++       ++|++|||||....   .+.+...+++|+.+++++++++.+.    +...
T Consensus        78 ~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g  151 (278)
T 3sx2_A           78 ARQADVRDRE------SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGG  151 (278)
T ss_dssp             EEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCE
T ss_pred             EEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc
Confidence            9999999855      4555543       78999999997642   5678889999999999999998642    1246


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       152 ~iv~is  157 (278)
T 3sx2_A          152 SIVLIS  157 (278)
T ss_dssp             EEEEEC
T ss_pred             EEEEEc
Confidence            888876

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.72  E-value=6.5e-17  Score=114.31  Aligned_cols=119  Identities=20%  Similarity=0.211  Sum_probs=88.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+|+||++++++|+++|+   +|++.+|+..  ...+...++                ..++.++.+|+
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~~----------------~~~~~~~~~Dv   61 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGA---TVIVSDINAE--GAKAAAASI----------------GKKARAIAADI   61 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCHH--HHHHHHHHH----------------CTTEEECCCCT
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHh----------------CCceEEEEcCC
Confidence            36789999999999999999999999996   6788887532  111111111                35788899999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcce
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~  148 (152)
                      ++++      ++.++++       ++|++|||||...       ..+.|+..+++|+.+++++++++.+    .+..+++
T Consensus        62 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~i  135 (247)
T 3rwb_A           62 SDPG------SVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRV  135 (247)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEE
Confidence            9864      4554443       7899999999753       2567888999999999999998643    2225688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       136 v~is  139 (247)
T 3rwb_A          136 ISIA  139 (247)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8875

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.72  E-value=1.4e-16  Score=115.46  Aligned_cols=129  Identities=12%  Similarity=0.141  Sum_probs=88.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++.+|+..  ...+.+.++...            ...++.++.+|+
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~---~V~~~~r~~~--~~~~~~~~l~~~------------~~~~~~~~~~Dl   71 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI---MVVLTCRDVT--KGHEAVEKLKNS------------NHENVVFHQLDV   71 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHTT------------TCCSEEEEECCT
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHhc------------CCCceEEEEccC
Confidence            45789999999999999999999999986   7888888643  222333333221            135789999999


Q ss_pred             CCC-CCCCC-hhHHHHHhccccEEEecccccc-------------------------------------chhhHHHHHHh
Q psy11862         87 LQA-NLGIK-DSDLLMLQEEVSVVFNGAASLK-------------------------------------LEAELKENVAA  127 (152)
Q Consensus        87 ~~~-~~~~~-~~~~~~~~~~~d~vi~~a~~~~-------------------------------------~~~~~~~~~~~  127 (152)
                      +++ +.--. .+.+.+.+.++|++|||||...                                     ..+.++..+++
T Consensus        72 ~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (311)
T 3o26_A           72 TDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKI  151 (311)
T ss_dssp             TSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheee
Confidence            996 41000 0112223347999999999752                                     13445668999


Q ss_pred             hhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862        128 NTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus       128 n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      |+.++.++++++.+.   .+.+++|++|
T Consensus       152 N~~g~~~l~~~~~~~l~~~~~~~IV~is  179 (311)
T 3o26_A          152 NYNGVKSVTEVLIPLLQLSDSPRIVNVS  179 (311)
T ss_dssp             HTHHHHHHHHHHHHHHTTSSSCEEEEEC
T ss_pred             eeehHHHHHHHhhHhhccCCCCeEEEEe
Confidence            999999999998642   2446898876

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.72  E-value=9.4e-17  Score=114.71  Aligned_cols=116  Identities=15%  Similarity=0.175  Sum_probs=86.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+.+++++||||+|+||++++++|++.|+   +|++++|+.      +.++...               ...+.++.+|+
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~------~~~~~~~---------------~~~~~~~~~Dv   68 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGH---PLLLLARRV------ERLKALN---------------LPNTLCAQVDV   68 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCH------HHHHTTC---------------CTTEEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHhh---------------cCCceEEEecC
Confidence            35678999999999999999999999997   567788752      2222211               24688899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.+++|
T Consensus        69 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV  142 (266)
T 3p19_A           69 TDKY------TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTII  142 (266)
T ss_dssp             TCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            9854      454444       37899999999753       25678889999999999988887531   2457888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       143 ~is  145 (266)
T 3p19_A          143 NIS  145 (266)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.72  E-value=1e-16  Score=113.93  Aligned_cols=122  Identities=16%  Similarity=0.102  Sum_probs=89.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++..             ...++.++.+|+
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~D~   72 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGA---HVVVSSRKQE--NVDRTVATLQG-------------EGLSVTGTVCHV   72 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEccC
Confidence            36789999999999999999999999986   7788888532  11111122111             125688899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++++      ++.+++       .++|++|||||...        ..+.++..+++|+.++.++++++.+.   .+.++|
T Consensus        73 ~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~i  146 (260)
T 2zat_A           73 GKAE------DRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSV  146 (260)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence            9854      454444       37999999999642        14567889999999999999987631   246789


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       147 v~is  150 (260)
T 2zat_A          147 LIVS  150 (260)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            8876

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.72  E-value=5.4e-17  Score=117.93  Aligned_cols=110  Identities=22%  Similarity=0.250  Sum_probs=84.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ||+|+||||+||||++++++|++.|+   .+ ++++..... .                    ......+.++.+|+++ 
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~---~v-~~~~~~~~~-~--------------------~~~~~~~~~~~~Dl~~-   54 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNE---IV-VIDNLSSGN-E--------------------EFVNEAARLVKADLAA-   54 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSC---EE-EECCCSSCC-G--------------------GGSCTTEEEECCCTTT-
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC---EE-EEEcCCCCC-h--------------------hhcCCCcEEEECcCCh-
Confidence            46899999999999999999999972   33 444432211 0                    0012568899999988 


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++++|+|||+|+....   ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        55 ~------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~S  113 (313)
T 3ehe_A           55 D------DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTS  113 (313)
T ss_dssp             S------CCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEC
T ss_pred             H------HHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeC
Confidence            4      377788899999999996432   4667889999999999999999987 678999987

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.72  E-value=8.4e-17  Score=115.36  Aligned_cols=123  Identities=15%  Similarity=0.159  Sum_probs=87.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  .+.+...++..         . .....++.++.+|++
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~---------~-~~~~~~~~~~~~D~~   68 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGA---KVTITGRHAE--RLEETRQQILA---------A-GVSEQNVNSVVADVT   68 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH---------T-TCCGGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh---------c-ccCCCceeEEecccC
Confidence            5789999999999999999999999986   6788888532  11111111100         0 011246888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCc
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM---KKLV  146 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~  146 (152)
                      +++      ++.++++       ++|++|||||...           ..+.++..+++|+.++.++++++.+.   .+ +
T Consensus        69 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g  141 (278)
T 1spx_A           69 TDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-G  141 (278)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C
Confidence            854      4555554       8999999999653           34567778999999999999998753   13 6


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       142 ~iv~is  147 (278)
T 1spx_A          142 EIVNIS  147 (278)
T ss_dssp             EEEEEC
T ss_pred             eEEEEe
Confidence            888876

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.71  E-value=8.7e-17  Score=114.89  Aligned_cols=124  Identities=19%  Similarity=0.196  Sum_probs=90.0

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++..            ....++.++.+|
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~------------~~~~~~~~~~~D   79 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGC---SVVVASRNLE--EASEAAQKLTE------------KYGVETMAFRCD   79 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH------------HHCCCEEEEECC
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH------------hcCCeEEEEEcC
Confidence            357889999999999999999999999986   6788888532  11111111100            012568889999


Q ss_pred             cCCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++++      ++.++++       ++|++|||||....       .+.++..+++|+.+++++++++.+.   .+.++|
T Consensus        80 l~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~i  153 (267)
T 1vl8_A           80 VSNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSI  153 (267)
T ss_dssp             TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEE
Confidence            99854      4554443       78999999997532       4567889999999999999988542   245789


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       154 v~is  157 (267)
T 1vl8_A          154 INIG  157 (267)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            9876

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.71  E-value=6.3e-17  Score=115.18  Aligned_cols=122  Identities=11%  Similarity=0.103  Sum_probs=89.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..  ...+...++..         .   ...++.++.+|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~---------~---~~~~~~~~~~D~~   67 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGA---HIVLVARQVD--RLHEAARSLKE---------K---FGVRVLEVAVDVA   67 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH---------H---HCCCEEEEECCTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHH--HHHHHHHHHHH---------h---cCCceEEEEcCCC
Confidence            6789999999999999999999999986   6788888532  11111111110         0   0246888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.+++|+
T Consensus        68 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~  141 (263)
T 3ai3_A           68 TPE------GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIH  141 (263)
T ss_dssp             SHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            854      4555543       7899999999753       24677889999999999999988642   24578888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       142 is  143 (263)
T 3ai3_A          142 NA  143 (263)
T ss_dssp             EC
T ss_pred             EC
Confidence            76

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.71  E-value=1.1e-16  Score=114.40  Aligned_cols=124  Identities=19%  Similarity=0.169  Sum_probs=90.2

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||++++++|++.|+   +|++..++... ...+...++..             ...++.++.+|
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~D   76 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGA---KVVVNYANSTK-DAEKVVSEIKA-------------LGSDAIAIKAD   76 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTC---EEEEEESSCHH-HHHHHHHHHHH-------------TTCCEEEEECC
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCCHH-HHHHHHHHHHh-------------cCCcEEEEEcC
Confidence            457889999999999999999999999996   66666654320 11111111111             13678899999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEe
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLD  150 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~  150 (152)
                      +++++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+. ....++|+
T Consensus        77 v~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~  150 (270)
T 3is3_A           77 IRQVP------EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVL  150 (270)
T ss_dssp             TTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEE
Confidence            99954      454444       37899999999754       25678889999999999999999864 12347888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       151 is  152 (270)
T 3is3_A          151 TS  152 (270)
T ss_dssp             EC
T ss_pred             Ee
Confidence            75

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.71  E-value=6.2e-17  Score=116.47  Aligned_cols=122  Identities=16%  Similarity=0.102  Sum_probs=90.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  .+.+...++.             ....++.++.+|+
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~~~-------------~~~~~~~~~~~Dv   66 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGA---KVVVTARNGN--ALAELTDEIA-------------GGGGEAAALAGDV   66 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEECCSCHH--HHHHHHHHHT-------------TTTCCEEECCCCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHH-------------hcCCcEEEEECCC
Confidence            37789999999999999999999999996   6788887532  1122222221             1236788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++++      ++.+++       .++|++|||||...        ..+.++..+++|+.+++++++++.+.   .+..++
T Consensus        67 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i  140 (280)
T 3tox_A           67 GDEA------LHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSL  140 (280)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence            9854      454444       37899999999652        24678889999999999999988642   244688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       141 v~is  144 (280)
T 3tox_A          141 TFTS  144 (280)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            8875

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.71  E-value=5.2e-17  Score=115.71  Aligned_cols=121  Identities=17%  Similarity=0.165  Sum_probs=89.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHh-hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLR-SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~-~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .++++++||||+|+||++++++|++ .|+   .|++++|+..  ...+...++..             ...++.++.+|+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl   63 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSG---DVVLTARDVT--RGQAAVQQLQA-------------EGLSPRFHQLDI   63 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS---EEEEEESSHH--HHHHHHHHHHH-------------TTCCCEEEECCT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCC---eEEEEeCChH--HHHHHHHHHHh-------------cCCeeEEEECCC
Confidence            4678999999999999999999999 886   7788888532  11222222211             125688899999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEec
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMK-KLVVSLDI  151 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~  151 (152)
                      ++++      ++..+++       ++|++||+||....       .+.+...+++|+.++.++++++.+.. ..++||++
T Consensus        64 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~  137 (276)
T 1wma_A           64 DDLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV  137 (276)
T ss_dssp             TCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCHH------HHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence            9854      4555544       79999999997532       36677899999999999999998751 12488887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       138 s  138 (276)
T 1wma_A          138 S  138 (276)
T ss_dssp             C
T ss_pred             C
Confidence            6

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.71  E-value=1.1e-16  Score=114.96  Aligned_cols=118  Identities=17%  Similarity=0.137  Sum_probs=88.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..      .+.+...            ....++.++.+|++
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv~   83 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGA---YVVVADVNED------AAVRVAN------------EIGSKAFGVRVDVS   83 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHH------HHHHHHH------------HHCTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH------------HhCCceEEEEecCC
Confidence            5789999999999999999999999996   7788887532      2222111            01357889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.+++|+
T Consensus        84 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~  157 (277)
T 4dqx_A           84 SAK------DAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIIN  157 (277)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            854      4554443       7899999999653       25678889999999999999988642   23468888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       158 is  159 (277)
T 4dqx_A          158 TT  159 (277)
T ss_dssp             EC
T ss_pred             EC
Confidence            76

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.71  E-value=1.5e-16  Score=112.97  Aligned_cols=122  Identities=11%  Similarity=0.110  Sum_probs=90.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+.+.++..            ....++.++.+|++
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~------------~~~~~~~~~~~Dl~   74 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA---NVAVIYRSAA--DAVEVTEKVGK------------EFGVKTKAYQCDVS   74 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCT--THHHHHHHHHH------------HHTCCEEEEECCTT
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCcch--hhHHHHHHHHH------------hcCCeeEEEEeeCC
Confidence            6789999999999999999999999986   7888888654  22332332211            01257889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v  149 (152)
                      +++      ++.+++       .++|++||+||...       ..+.+...+++|+.++.++++++.+.    +..++||
T Consensus        75 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv  148 (265)
T 1h5q_A           75 NTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIV  148 (265)
T ss_dssp             CHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEE
Confidence            854      454443       35899999999753       24567778999999999999988643    2246888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       149 ~~s  151 (265)
T 1h5q_A          149 VTS  151 (265)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            876

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.71  E-value=3.7e-17  Score=122.46  Aligned_cols=123  Identities=18%  Similarity=0.161  Sum_probs=87.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC--------------CCHHHHHHHHhcChhhhhhhhhcc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG--------------LTPKARLAEFSKLPVFERLRKECP   73 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~   73 (152)
                      .++++|+||||+||||++++++|++.|+   .|++++|....              ..+.+.+....            .
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------------~   73 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNY---EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK------------A   73 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHH------------H
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCC---eEEEEEecCccccccccccccccccchhhhhhhhHh------------h
Confidence            5789999999999999999999999987   67788764210              00011111110            0


Q ss_pred             ccCCcEEEEEcccCCCCCCCChhHHHHHhcc--ccEEEeccccccch------hhHHHHHHhhhHHHHHHHHHHHhcCCC
Q psy11862         74 AQLSRLHIIEGDILQANLGIKDSDLLMLQEE--VSVVFNGAASLKLE------AELKENVAANTRGTQRLLDIALKMKKL  145 (152)
Q Consensus        74 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~d~vi~~a~~~~~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~  145 (152)
                      ....++.++.+|+++++      ++.+++++  +|+|||+||.....      ..+...+++|+.++.++++++.+. +.
T Consensus        74 ~~~~~v~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~  146 (404)
T 1i24_A           74 LTGKSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GE  146 (404)
T ss_dssp             HHCCCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CT
T ss_pred             ccCCceEEEECCCCCHH------HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CC
Confidence            01256888999999854      67788876  99999999976431      222357899999999999999987 45


Q ss_pred             -cceEecC
Q psy11862        146 -VVSLDIG  152 (152)
Q Consensus       146 -~~~v~~S  152 (152)
                       ++||++|
T Consensus       147 ~~~~V~~S  154 (404)
T 1i24_A          147 ECHLVKLG  154 (404)
T ss_dssp             TCEEEEEC
T ss_pred             CcEEEEeC
Confidence             5999987

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.71  E-value=4.8e-17  Score=116.01  Aligned_cols=125  Identities=14%  Similarity=0.176  Sum_probs=90.2

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      |...+++++++||||+|+||++++++|+++|+   +|++.+|+..  .+.+...++..             ...++.++.
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~   66 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGA---DLVLAARTVE--RLEDVAKQVTD-------------TGRRALSVG   66 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEE
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEE
Confidence            33457899999999999999999999999996   6788888532  11222222211             136788999


Q ss_pred             cccCCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCc
Q psy11862         84 GDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM--KKLV  146 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~  146 (152)
                      +|+++++      ++.+++       .++|++|||||...        ..+.++..+++|+.+++++++++.+.  .+..
T Consensus        67 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g  140 (264)
T 3ucx_A           67 TDITDDA------QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKG  140 (264)
T ss_dssp             CCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTC
T ss_pred             cCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            9999964      454444       37899999998642        14678889999999999999987642  1125


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       141 ~iv~is  146 (264)
T 3ucx_A          141 AVVNVN  146 (264)
T ss_dssp             EEEEEC
T ss_pred             EEEEEC
Confidence            888876

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.71  E-value=1.3e-16  Score=114.71  Aligned_cols=128  Identities=17%  Similarity=0.126  Sum_probs=92.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC------HHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT------PKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++++|+.....      ..+.+.....     .+    .....++.
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~   74 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGA---DIILFDICHDIETNEYPLATSRDLEEAGL-----EV----EKTGRKAY   74 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTSCSCCCCHHHHHHHHH-----HH----HHTTSCEE
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCC---eEEEEcccccccccccchhhhHHHHHHHH-----HH----HhcCCceE
Confidence            37889999999999999999999999996   6788887632211      1222222111     00    11236789


Q ss_pred             EEEcccCCCCCCCChhHHHHHhc-------cccEEEeccccccc-----hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcc
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL-----EAELKENVAANTRGTQRLLDIALKM-KKLVV  147 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~  147 (152)
                      ++.+|+++++      ++.++++       ++|++|||||....     .+.+...+++|+.+++++++++.+. .+..+
T Consensus        75 ~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~  148 (287)
T 3pxx_A           75 TAEVDVRDRA------AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGAS  148 (287)
T ss_dssp             EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCE
T ss_pred             EEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcE
Confidence            9999999854      4544443       78999999997542     5678889999999999999999864 23357


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       149 iv~is  153 (287)
T 3pxx_A          149 IITTG  153 (287)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            88875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.71  E-value=8e-17  Score=114.39  Aligned_cols=121  Identities=14%  Similarity=0.119  Sum_probs=88.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|++.|+   +|++++|+.....+.+....+..             ...++.++.+|++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~   65 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF---DIAVADLPQQEEQAAETIKLIEA-------------ADQKAVFVGLDVTDK   65 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEECGGGHHHHHHHHHHHHT-------------TTCCEEEEECCTTCH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcchHHHHHHHHHHHh-------------cCCcEEEEEccCCCH
Confidence            68999999999999999999999986   67888886431002222222211             135788999999985


Q ss_pred             CCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC-cceEec
Q psy11862         90 NLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKL-VVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v~~  151 (152)
                      +      ++.++++       ++|++|||||...       ..+.++..+++|+.+++++++++.+.   .+. ++||++
T Consensus        66 ~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  139 (258)
T 3a28_C           66 A------NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINA  139 (258)
T ss_dssp             H------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred             H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            4      4554443       7899999999753       24677889999999999999988752   234 688887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       140 s  140 (258)
T 3a28_C          140 A  140 (258)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.71  E-value=6.8e-17  Score=116.00  Aligned_cols=120  Identities=20%  Similarity=0.284  Sum_probs=87.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+..+++..              ..++.++.+|++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~--~~~~~~~~l~~--------------~~~~~~~~~Dv~   87 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGA---RVFICARDAE--ACADTATRLSA--------------YGDCQAIPADLS   87 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCHH--HHHHHHHHHTT--------------SSCEEECCCCTT
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh--------------cCceEEEEeeCC
Confidence            6789999999999999999999999986   6788887532  11111112111              126788899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC----c
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKL----V  146 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~----~  146 (152)
                      +++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+.   .+.    +
T Consensus        88 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g  161 (276)
T 2b4q_A           88 SEA------GARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPA  161 (276)
T ss_dssp             SHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCC
Confidence            854      454444       37899999999653       24668889999999999998887531   122    7


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      +||++|
T Consensus       162 ~iV~is  167 (276)
T 2b4q_A          162 RVINIG  167 (276)
T ss_dssp             EEEEEC
T ss_pred             EEEEEC
Confidence            888876

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.71  E-value=1e-16  Score=112.64  Aligned_cols=118  Identities=18%  Similarity=0.201  Sum_probs=88.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..      .+.++..         .    ..++.++.+|+
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~~---------~----~~~~~~~~~D~   61 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGA---KVVAVTRTNS------DLVSLAK---------E----CPGIEPVCVDL   61 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH---------H----STTCEEEECCT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH---------h----ccCCCcEEecC
Confidence            37789999999999999999999999986   6788887532      2222111         0    13456679999


Q ss_pred             CCCCCCCChhHHHHHhc---cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQE---EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-LVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~S  152 (152)
                      ++++      ++.++++   ++|++||+||...       ..+.+...+++|+.++.++++++.+.   .+ .++||++|
T Consensus        62 ~~~~------~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~s  135 (244)
T 1cyd_A           62 GDWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVS  135 (244)
T ss_dssp             TCHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCHH------HHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Confidence            9854      6777665   5899999999653       14567789999999999999988653   13 57899876

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.71  E-value=6.7e-17  Score=110.52  Aligned_cols=109  Identities=17%  Similarity=0.178  Sum_probs=86.2

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++|+++||||+|++|++++++|++.|+   .|++++|++....                     .....++.++.+|+++
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~---~V~~~~r~~~~~~---------------------~~~~~~~~~~~~D~~~   57 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDSSRLP---------------------SEGPRPAHVVVGDVLQ   57 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCGGGSC---------------------SSSCCCSEEEESCTTS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeChhhcc---------------------cccCCceEEEEecCCC
Confidence            347999999999999999999999986   7888888643110                     0002568899999988


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.+.++++|+|||++|..... ++   .++|+.++.++++++.+. +.++||++|
T Consensus        58 ~~------~~~~~~~~~d~vi~~a~~~~~~-~~---~~~n~~~~~~~~~~~~~~-~~~~~v~~S  110 (206)
T 1hdo_A           58 AA------DVDKTVAGQDAVIVLLGTRNDL-SP---TTVMSEGARNIVAAMKAH-GVDKVVACT  110 (206)
T ss_dssp             HH------HHHHHHTTCSEEEECCCCTTCC-SC---CCHHHHHHHHHHHHHHHH-TCCEEEEEC
T ss_pred             HH------HHHHHHcCCCEEEECccCCCCC-Cc---cchHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence            54      7889999999999999975431 11   258899999999999987 678999986

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.71  E-value=1.1e-16  Score=113.87  Aligned_cols=120  Identities=13%  Similarity=0.102  Sum_probs=91.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|+++|.   +|++.+|+....   +.++.+..             ...++.++.+|++
T Consensus         5 L~gKvalVTGas~GIG~aia~~la~~Ga---~Vv~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~Dv~   65 (258)
T 4gkb_A            5 LQDKVVIVTGGASGIGGAISMRLAEERA---IPVVFARHAPDG---AFLDALAQ-------------RQPRATYLPVELQ   65 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCCH---HHHHHHHH-------------HCTTCEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCcccH---HHHHHHHh-------------cCCCEEEEEeecC
Confidence            7899999999999999999999999985   788888876532   22222211             1367889999999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEecccccc------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +++      ++.++       +.++|++|||||...      ..+.|+..+++|+.+++.+.+++.+.  .+..++|++|
T Consensus        66 ~~~------~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnis  139 (258)
T 4gkb_A           66 DDA------QCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNIS  139 (258)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence            864      34333       347899999999753      25778889999999999999988642  1235788875

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.71  E-value=1.5e-16  Score=116.63  Aligned_cols=117  Identities=21%  Similarity=0.219  Sum_probs=87.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |+++||||+|+||++++++|++.|+   .|++++|.... ....+.+....               ..++.++.+|++++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~~~   62 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGH---DVIILDNLCNSKRSVLPVIERLG---------------GKHPTFVEGDIRNE   62 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTTHHHHHHHHH---------------TSCCEEEECCTTCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEecCCCcchhHHHHHHhhc---------------CCcceEEEccCCCH
Confidence            4799999999999999999999987   66777764322 22222222110               14577889999885


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++  ++|+|||+||....   ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        63 ~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~S  123 (338)
T 1udb_A           63 A------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSS  123 (338)
T ss_dssp             H------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             H------HHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEc
Confidence            4      5777765  59999999997542   2345668999999999999999886 678999986

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.71  E-value=9.9e-17  Score=115.41  Aligned_cols=125  Identities=11%  Similarity=0.106  Sum_probs=89.7

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||++++++|++.|+   +|++.+|+... ...+....+..            ....++.++.+|
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~---~V~~~~r~~~~-~~~~~~~~~~~------------~~~~~~~~~~~D   84 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGA---NIVLNGFGAPD-EIRTVTDEVAG------------LSSGTVLHHPAD   84 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEECCCCHH-HHHHHHHHHHT------------TCSSCEEEECCC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCChH-HHHHHHHHHhh------------ccCCcEEEEeCC
Confidence            347789999999999999999999999996   67888774320 11111111111            113578899999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+.   .+.+++
T Consensus        85 v~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i  158 (281)
T 3v2h_A           85 MTKPS------EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRI  158 (281)
T ss_dssp             TTCHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence            99854      455444       37899999999753       25677889999999999999998532   245688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       159 v~is  162 (281)
T 3v2h_A          159 INIA  162 (281)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8876

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.71  E-value=1.1e-16  Score=114.43  Aligned_cols=120  Identities=17%  Similarity=0.230  Sum_probs=88.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..  ...+...++             . ...++.++.+|++
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~~-------------~-~~~~~~~~~~D~~   74 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGA---KVVIADIADD--HGQKVCNNI-------------G-SPDVISFVHCDVT   74 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHH-------------C-CTTTEEEEECCTT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCChh--HHHHHHHHh-------------C-CCCceEEEECCCC
Confidence            6789999999999999999999999986   6778887532  111111111             0 0136889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++      ++.++++       ++|++||+||....         .+.+...+++|+.++.++++++.+.   .+.++|
T Consensus        75 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i  148 (278)
T 2bgk_A           75 KDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSI  148 (278)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeE
Confidence            854      4555544       78999999996531         3667889999999999999998763   245788


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       149 v~is  152 (278)
T 2bgk_A          149 VFTA  152 (278)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            8876

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.71  E-value=9.1e-17  Score=112.82  Aligned_cols=118  Identities=16%  Similarity=0.155  Sum_probs=85.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |.+++++||||+|+||++++++|+++|+   +|++.+|+..      .+.+...     .+       ..++.++.+|++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~---~V~~~~r~~~------~~~~~~~-----~~-------~~~~~~~~~D~~   59 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGH---QVSMMGRRYQ------RLQQQEL-----LL-------GNAVIGIVADLA   59 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH-----HH-------GGGEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH-----Hh-------cCCceEEECCCC
Confidence            4578999999999999999999999996   7888888532      2222111     00       135889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~  151 (152)
                      +++      ++.+++       .++|++|||||...       ..+.++..+++|+.++.++++++.+.  ....++|++
T Consensus        60 ~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~i  133 (235)
T 3l6e_A           60 HHE------DVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANV  133 (235)
T ss_dssp             SHH------HHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEE
Confidence            854      454444       37899999999753       25678889999999999999998653  122378877


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       134 s  134 (235)
T 3l6e_A          134 L  134 (235)
T ss_dssp             C
T ss_pred             e
Confidence            5

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.71  E-value=3.2e-16  Score=112.35  Aligned_cols=123  Identities=15%  Similarity=0.157  Sum_probs=91.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-----CHHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-----TPKARLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      +++|+++||||+|+||++++++|+++|+   +|++.+|+....     .+.+....+..             ...++.++
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~   67 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGA---NVAIAAKSAVANPKLPGTIHSAAAAVNA-------------AGGQGLAL   67 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCSCCTTSCCCHHHHHHHHHH-------------HTSEEEEE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeccchhhhhhHHHHHHHHHHHHh-------------cCCeEEEE
Confidence            6789999999999999999999999986   788888876431     12222222211             13678899


Q ss_pred             EcccCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC
Q psy11862         83 EGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKL  145 (152)
Q Consensus        83 ~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~  145 (152)
                      .+|+++++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++.+++.+.   .+.
T Consensus        68 ~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  141 (274)
T 3e03_A           68 KCDIREED------QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPN  141 (274)
T ss_dssp             ECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSS
T ss_pred             eCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCC
Confidence            99999864      444443       37899999999753       25677889999999999999998652   234


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      .++|++|
T Consensus       142 g~iv~is  148 (274)
T 3e03_A          142 PHILTLA  148 (274)
T ss_dssp             CEEEECC
T ss_pred             ceEEEEC
Confidence            6888876

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.71  E-value=1.3e-16  Score=113.84  Aligned_cols=123  Identities=17%  Similarity=0.169  Sum_probs=89.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|+..  ...+...++..         .  ....++.++.+|++
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~~~~Dv~   69 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGA---AVAFCARDGE--RLRAAESALRQ---------R--FPGARLFASVCDVL   69 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH---------H--STTCCEEEEECCTT
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH---------h--cCCceEEEEeCCCC
Confidence            7889999999999999999999999996   6788888532  11222222211         0  11245889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++|||||....       .+.++..+++|+.+++++++++.+.   .+..++|+
T Consensus        70 ~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~  143 (265)
T 3lf2_A           70 DAL------QVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVC  143 (265)
T ss_dssp             CHH------HHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Confidence            854      444443       478999999997532       5678889999999999999998652   23467887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       144 is  145 (265)
T 3lf2_A          144 VN  145 (265)
T ss_dssp             EE
T ss_pred             EC
Confidence            75

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.71  E-value=1.2e-16  Score=113.68  Aligned_cols=122  Identities=19%  Similarity=0.148  Sum_probs=89.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  .+.+...++..             ...++.++.+|+
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~   87 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGA---RVVLTARDVE--KLRAVEREIVA-------------AGGEAESHACDL   87 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCEEEEEECCT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHH-------------hCCceeEEEecC
Confidence            36789999999999999999999999986   6788888532  11222122211             136788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++++      ++.+++       .++|++|||||...        ..+.+...+++|+.++.++++++.+.   .+.++|
T Consensus        88 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i  161 (262)
T 3rkr_A           88 SHSD------AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHI  161 (262)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceE
Confidence            9854      454443       36899999999721        25667889999999999999987642   245688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       162 v~is  165 (262)
T 3rkr_A          162 INIS  165 (262)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            8876

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.71  E-value=1.4e-16  Score=114.05  Aligned_cols=121  Identities=19%  Similarity=0.230  Sum_probs=89.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  .+.+...++..             ...++.++.+|++
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   80 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGA---RVYTCSRNEK--ELDECLEIWRE-------------KGLNVEGSVCDLL   80 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEECCCC
Confidence            6789999999999999999999999986   6788888532  11221122111             1256888999999


Q ss_pred             CCCCCCChhHHHHHh--------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ--------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~--------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      ++.+++        .++|++|||||...       ..+.++..+++|+.+++++++++.+.   .+.+++|
T Consensus        81 ~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv  154 (273)
T 1ae1_A           81 SRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVI  154 (273)
T ss_dssp             CHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            854      454444        57899999999753       24678889999999999999988531   2457888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       155 ~is  157 (273)
T 1ae1_A          155 FLS  157 (273)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.71  E-value=1.3e-16  Score=114.67  Aligned_cols=119  Identities=14%  Similarity=0.116  Sum_probs=89.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++                ..++.++.+|+
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~~----------------~~~~~~~~~Dv   84 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGC---HVLCADIDGD--AADAAATKI----------------GCGAAACRVDV   84 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTC---EEEEEESSHH--HHHHHHHHH----------------CSSCEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHc----------------CCcceEEEecC
Confidence            36789999999999999999999999996   7788887532  111111111                25688899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.++..+++|+.+++++++++.+.   .+..++|
T Consensus        85 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv  158 (277)
T 3gvc_A           85 SDEQ------QIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIV  158 (277)
T ss_dssp             TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            9864      444443       37899999999754       25678889999999999999998652   2456888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       159 ~is  161 (277)
T 3gvc_A          159 NLS  161 (277)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.71  E-value=1e-16  Score=114.22  Aligned_cols=117  Identities=16%  Similarity=0.121  Sum_probs=85.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ++||+++||||+++||+++++.|++.|+   +|++.+|+....                         ..+...+.+|++
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~~~-------------------------~~~~~~~~~Dv~   60 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLELGA---QVLTTARARPEG-------------------------LPEELFVEADLT   60 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHTTC---EEEEEESSCCTT-------------------------SCTTTEEECCTT
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHcCC---EEEEEECCchhC-------------------------CCcEEEEEcCCC
Confidence            7899999999999999999999999996   778888864311                         123346789999


Q ss_pred             CCCCCCC-hhHHHHHhccccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIK-DSDLLMLQEEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +++..-. .+...+.+.++|++|||||...         ..++|+..+++|+.+++.+.+++.+.   ++-.++|++|
T Consensus        61 ~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~is  138 (261)
T 4h15_A           61 TKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVT  138 (261)
T ss_dssp             SHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEE
Confidence            8651000 1112233347899999998642         15678889999999999999888642   2446788765

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.71  E-value=1e-16  Score=115.70  Aligned_cols=127  Identities=18%  Similarity=0.253  Sum_probs=92.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+....|++.+|+..  .+.+...++..         .  ....++.++.+|+
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~~~~Dv   96 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLE--KLEELKKTIDQ---------E--FPNAKVHVAQLDI   96 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHH--HHHHHHHHHHH---------H--CTTCEEEEEECCT
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHH--HHHHHHHHHHh---------h--CCCCeEEEEECCC
Confidence            478899999999999999999999999865447888888532  11111111111         0  0135788999999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++++      ++.++++       ++|++|||||...        ..+.++..+++|+.+++++++++.+.   .+.++|
T Consensus        97 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~I  170 (287)
T 3rku_A           97 TQAE------KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDI  170 (287)
T ss_dssp             TCGG------GHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence            9976      4655554       6899999999653        25678889999999999999998531   245688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       171 V~is  174 (287)
T 3rku_A          171 VNLG  174 (287)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8876

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.71  E-value=4.9e-17  Score=118.97  Aligned_cols=123  Identities=20%  Similarity=0.165  Sum_probs=89.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+||||.+++++|++.|+   +|++.+|+..  ...+....+...           .....+.++.+|++
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~---~Vv~~~r~~~--~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~   69 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGC---KVAIADIRQD--SIDKALATLEAE-----------GSGPEVMGVQLDVA   69 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHHH-----------TCGGGEEEEECCTT
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHhc-----------CCCCeEEEEECCCC
Confidence            6789999999999999999999999997   6788888643  122222222110           01137889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhcC---------C
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKMK---------K  144 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~  144 (152)
                      +++      ++.+++       .++|++|||||...       ..+.+..++++|+.++.++++++.+..         +
T Consensus        70 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  143 (319)
T 3ioy_A           70 SRE------GFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQK  143 (319)
T ss_dssp             CHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCC
Confidence            954      455444       36899999999653       246678899999999999999886531         2


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      .++||++|
T Consensus       144 ~g~iV~is  151 (319)
T 3ioy_A          144 GGHVVNTA  151 (319)
T ss_dssp             CCEEEEEC
T ss_pred             CcEEEEec
Confidence            35788876

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.71  E-value=8e-17  Score=116.92  Aligned_cols=111  Identities=21%  Similarity=0.220  Sum_probs=86.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|++.|+   .|++++|.....  .+.                   ...++.++.+|+++++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~--~~~-------------------~~~~~~~~~~Dl~~~~   56 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGL---EVAVLDNLATGK--REN-------------------VPKGVPFFRVDLRDKE   56 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC---EEEEECCCSSCC--GGG-------------------SCTTCCEECCCTTCHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC---EEEEEECCCcCc--hhh-------------------cccCeEEEECCCCCHH
Confidence            4799999999999999999999987   677777743211  000                   0135667889998854


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++.++++  ++|+|||+|+....   ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        57 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~S  116 (311)
T 2p5y_A           57 ------GVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFAS  116 (311)
T ss_dssp             ------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred             ------HHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeC
Confidence                  6777777  79999999997643   3456778999999999999999986 678999986

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.71  E-value=7.6e-17  Score=114.53  Aligned_cols=130  Identities=17%  Similarity=0.127  Sum_probs=88.0

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+....+...+      ........++.++.+|
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~D   71 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGA---TVAACDLDRA--AAQETVRLLGGPG------SKEGPPRGNHAAFQAD   71 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHH--HHHHHHHTC------------------CCEEEECC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCChH--HHHHHHHHHHhcC------ccccccCcceEEEEec
Confidence            347789999999999999999999999986   6788888532  1111111110000      0000001467889999


Q ss_pred             cCCCCCCCChhHHHHHhc-------cc-cEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-Cc
Q psy11862         86 ILQANLGIKDSDLLMLQE-------EV-SVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-LV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~-------~~-d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~  146 (152)
                      +++++      ++.++++       ++ |++||+||...       ..+.+...+++|+.++.++++++.+.   .+ .+
T Consensus        72 ~~~~~------~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g  145 (264)
T 2pd6_A           72 VSEAR------AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRG  145 (264)
T ss_dssp             TTSHH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred             CCCHH------HHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCc
Confidence            99854      4555444       45 99999999753       24567889999999999999998753   12 46


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      +||++|
T Consensus       146 ~iv~is  151 (264)
T 2pd6_A          146 SIINIS  151 (264)
T ss_dssp             EEEEEC
T ss_pred             eEEEEC
Confidence            888876

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.71  E-value=6.3e-17  Score=117.81  Aligned_cols=100  Identities=16%  Similarity=0.191  Sum_probs=81.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++|+++||||+|+||++++++|++.|+   .|+++.|+.                                   .+|++
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~---~v~~~~r~~-----------------------------------~~D~~   42 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGD---VELVLRTRD-----------------------------------ELNLL   42 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTT---EEEECCCTT-----------------------------------TCCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEecCc-----------------------------------cCCcc
Confidence            3468999999999999999999999986   566666531                                   25887


Q ss_pred             CCCCCCChhHHHHHhc--cccEEEeccccccc----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE--EVSVVFNGAASLKL----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +++      ++.++++  ++|+|||+|+....    ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        43 d~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S  106 (321)
T 1e6u_A           43 DSR------AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLG  106 (321)
T ss_dssp             CHH------HHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             CHH------HHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEc
Confidence            743      6888888  89999999997642    3466778999999999999999987 688999987

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.71  E-value=1.1e-16  Score=113.90  Aligned_cols=122  Identities=14%  Similarity=0.118  Sum_probs=89.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-HHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-PKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  . +.+....+..         .   ...++.++.+|+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~~---------~---~~~~~~~~~~D~   64 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGA---DIVLNGFGDA--AEIEKVRAGLAA---------Q---HGVKVLYDGADL   64 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEECCSCH--HHHHHHHHHHHH---------H---HTSCEEEECCCT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCC---EEEEEeCCcc--hHHHHHHHHHHh---------c---cCCcEEEEECCC
Confidence            5789999999999999999999999986   6788887642  1 1111111110         0   024688899999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.++++       ++|++|||||...       ..+.++..+++|+.+++++++++.+.   .+.++||
T Consensus        65 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv  138 (260)
T 1x1t_A           65 SKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRII  138 (260)
T ss_dssp             TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence            9854      4554443       7899999999653       24677889999999999999988642   2457898


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       139 ~is  141 (260)
T 1x1t_A          139 NIA  141 (260)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            876

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.71  E-value=1.1e-16  Score=113.88  Aligned_cols=122  Identities=16%  Similarity=0.129  Sum_probs=88.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++..++.. ....+...++..             ...++.++.+|++
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~Dv~   68 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGA---NVVLTYNGAA-EGAATAVAEIEK-------------LGRSALAIKADLT   68 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECSSC-HHHHHHHHHHHT-------------TTSCCEEEECCTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCCH-HHHHHHHHHHHh-------------cCCceEEEEcCCC
Confidence            7889999999999999999999999996   6666644322 111222222211             1357889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEec
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKMK-KLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~  151 (152)
                      +++      ++.+++       .++|++|||||...        ..+.|+..+++|+.+++++++++.+.- ...++|++
T Consensus        69 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i  142 (259)
T 3edm_A           69 NAA------EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF  142 (259)
T ss_dssp             CHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence            964      455444       37899999998652        256678899999999999999998641 12478877


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       143 s  143 (259)
T 3edm_A          143 S  143 (259)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.71  E-value=1.1e-16  Score=117.28  Aligned_cols=127  Identities=16%  Similarity=0.135  Sum_probs=90.5

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC-------C-CCCHHHHHHHHhcChhhhhhhhhcccc
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK-------R-GLTPKARLAEFSKLPVFERLRKECPAQ   75 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (152)
                      ++..+++++++||||+|+||++++++|++.|+   +|++.+|+.       . .....+...++..             .
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------------~   84 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSPASGGSAAQSVVDEITA-------------A   84 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSSBTCTTSHHHHHHHHHHH-------------T
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCcccccccccccHHHHHHHHHHHHh-------------c
Confidence            33457889999999999999999999999996   778887751       1 1112222222211             1


Q ss_pred             CCcEEEEEcccCCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         76 LSRLHIIEGDILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        76 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      ..++.++.+|+++++      ++.++++       ++|++|||||...       ..+.++..+++|+.+++++++++.+
T Consensus        85 ~~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  158 (322)
T 3qlj_A           85 GGEAVADGSNVADWD------QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAA  158 (322)
T ss_dssp             TCEEEEECCCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            357889999999854      4554443       7899999999754       2567888999999999999998754


Q ss_pred             cC---------CCcceEecC
Q psy11862        142 MK---------KLVVSLDIG  152 (152)
Q Consensus       142 ~~---------~~~~~v~~S  152 (152)
                      .-         ...+||++|
T Consensus       159 ~~~~~~~~~~~~~g~IV~is  178 (322)
T 3qlj_A          159 YWRGLSKAGKAVDGRIINTS  178 (322)
T ss_dssp             HHHHHHHTTCCCCEEEEEEC
T ss_pred             HHHHccccCCCCCcEEEEEc
Confidence            20         014888876

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.71  E-value=2.5e-16  Score=113.88  Aligned_cols=122  Identities=15%  Similarity=0.218  Sum_probs=90.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|+..  ...+.+.+...            ....++.++.+|++
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dv~  107 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGA---NIAIAYLDEE--GDANETKQYVE------------KEGVKCVLLPGDLS  107 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHHH------------TTTCCEEEEESCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCch--HHHHHHHHHHH------------hcCCcEEEEECCCC
Confidence            6789999999999999999999999996   6788887643  11222222111            12367889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~  151 (152)
                      +++      ++.+++       .++|++|||||...        ..+.+...+++|+.+++++++++.+. ...+++|++
T Consensus       108 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i  181 (291)
T 3ijr_A          108 DEQ------HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT  181 (291)
T ss_dssp             SHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence            854      454444       37899999999653        24677889999999999999999874 223578887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       182 s  182 (291)
T 3ijr_A          182 A  182 (291)
T ss_dssp             C
T ss_pred             e
Confidence            5

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.70  E-value=2.4e-16  Score=115.57  Aligned_cols=112  Identities=22%  Similarity=0.263  Sum_probs=88.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |+++||||+|+||++++++|++. |+   .|++++|+....      ..+.              ...++.++.+|++++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~------~~~~--------------~~~~~~~~~~D~~~~   57 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHY---EVYGLDIGSDAI------SRFL--------------NHPHFHFVEGDISIH   57 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC---EEEEEESCCGGG------GGGT--------------TCTTEEEEECCTTTC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCC---EEEEEeCCcchH------HHhh--------------cCCCeEEEeccccCc
Confidence            57999999999999999999998 76   788888864311      0000              125788999999874


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .     +.+.++++++|+|||+||....   ..++...+++|+.++.++++++.+. + ++||++|
T Consensus        58 ~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~S  116 (345)
T 2bll_A           58 S-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPS  116 (345)
T ss_dssp             S-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEEC
T ss_pred             H-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEe
Confidence            3     2467778899999999997653   3456778999999999999999987 5 7999987

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.70  E-value=1.5e-16  Score=112.20  Aligned_cols=121  Identities=14%  Similarity=0.134  Sum_probs=89.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++.+|+..  ...+....+..             ...++.++.+|++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~   64 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGA---TVVGTATSQA--SAEKFENSMKE-------------KGFKARGLVLNIS   64 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSHH--HHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCceEEEEecCC
Confidence            5789999999999999999999999986   6788888532  11111111111             1357889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+..++|+
T Consensus        65 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~  138 (247)
T 3lyl_A           65 DIE------SIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIIS  138 (247)
T ss_dssp             CHH------HHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence            854      4554443       6899999999753       25677889999999999999987642   24468888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       139 is  140 (247)
T 3lyl_A          139 IG  140 (247)
T ss_dssp             EC
T ss_pred             Ec
Confidence            75

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.70  E-value=1.9e-16  Score=113.39  Aligned_cols=122  Identities=20%  Similarity=0.220  Sum_probs=89.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+|+||++++++|+++|+   +|++.+++... ...+....+..             ...++.++.+|++
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~-~~~~~~~~l~~-------------~~~~~~~~~~Dv~   91 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGA---AVALTYVNAAE-RAQAVVSEIEQ-------------AGGRAVAIRADNR   91 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHH-HHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCHH-HHHHHHHHHHh-------------cCCcEEEEECCCC
Confidence            6789999999999999999999999996   66776554320 11111111111             1367889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      +++      ++.++++       ++|++|||||...       ..+.|+..+++|+.+++++++++.+. ....++|++|
T Consensus        92 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is  165 (271)
T 3v2g_A           92 DAE------AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG  165 (271)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred             CHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence            854      4554443       7899999999753       25678889999999999999998764 2346788775

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.70  E-value=1.4e-16  Score=114.13  Aligned_cols=118  Identities=19%  Similarity=0.164  Sum_probs=86.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|+..      .+++...            ....++.++.+|++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv~   84 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGY---GVALAGRRLD------ALQETAA------------EIGDDALCVPTDVT   84 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH------------HHTSCCEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH------------HhCCCeEEEEecCC
Confidence            5678999999999999999999999996   6788887532      2222111            00256888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CC--Ccc
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KK--LVV  147 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~  147 (152)
                      +++      ++.++++       ++|++|||||...        ..+.|+..+++|+.+++++++++.+.   .+  ..+
T Consensus        85 d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~  158 (272)
T 4dyv_A           85 DPD------SVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGR  158 (272)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcE
Confidence            854      4555443       7999999999742        25667889999999999999988643   12  368


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      ||++|
T Consensus       159 IV~is  163 (272)
T 4dyv_A          159 IINNG  163 (272)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            88876

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.70  E-value=2.4e-16  Score=112.28  Aligned_cols=122  Identities=19%  Similarity=0.187  Sum_probs=89.7

Q ss_pred             cCCceEEEcCCcc-hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTG-FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G-~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+| +||++++++|+++|+   +|++++|+..  ...+...++..            ....++.++.+|+
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~------------~~~~~~~~~~~Dl   82 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGA---DVVISDYHER--RLGETRDQLAD------------LGLGRVEAVVCDV   82 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHT------------TCSSCEEEEECCT
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCC---EEEEecCCHH--HHHHHHHHHHh------------cCCCceEEEEeCC
Confidence            6789999999986 899999999999986   6788888532  12222222211            1135799999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~  148 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.++..+++|+.++.++++++.+.    ....++
T Consensus        83 ~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i  156 (266)
T 3o38_A           83 TSTE------AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVI  156 (266)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence            9854      454444       37899999999754       25667889999999999999998653    134678


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       157 v~~s  160 (266)
T 3o38_A          157 VNNA  160 (266)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            8775

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.70  E-value=9.9e-17  Score=115.13  Aligned_cols=123  Identities=16%  Similarity=0.143  Sum_probs=90.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++.+|+..  ...+...++..            ....++.++.+|+
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dv   86 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC---HTVIASRSLP--RVLTAARKLAG------------ATGRRCLPLSMDV   86 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESCHH--HHHHHHHHHHH------------HHSSCEEEEECCT
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH------------hcCCcEEEEEcCC
Confidence            47889999999999999999999999986   7788888532  11222222211            1135788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.++.++++|+.+++++.+++.+.   .+..+||
T Consensus        87 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv  160 (277)
T 4fc7_A           87 RAPP------AVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIV  160 (277)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence            9854      454444       37899999999543       25678889999999999999998542   1346888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       161 ~is  163 (277)
T 4fc7_A          161 NIT  163 (277)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            876

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.70  E-value=3.1e-16  Score=111.25  Aligned_cols=115  Identities=20%  Similarity=0.246  Sum_probs=86.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+...   .+...++                 .. .++.+|++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~-----------------~~-~~~~~D~~   59 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGA---LVALCDLRPEG---KEVAEAI-----------------GG-AFFQVDLE   59 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTH---HHHHHHH-----------------TC-EEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChhH---HHHHHHh-----------------hC-CEEEeeCC
Confidence            6789999999999999999999999986   67888886541   1111111                 13 67889999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++|||||....       .+.++..+++|+.++.++++++.+.   .+.+++|+
T Consensus        60 ~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~  133 (256)
T 2d1y_A           60 DER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVN  133 (256)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            854      444443       378999999997532       4567889999999999999988642   24578988


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       134 is  135 (256)
T 2d1y_A          134 VA  135 (256)
T ss_dssp             EC
T ss_pred             Ec
Confidence            76

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.70  E-value=1e-16  Score=114.75  Aligned_cols=123  Identities=26%  Similarity=0.324  Sum_probs=88.2

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      |+++.+ +++++++||||+|+||++++++|++.|+   +|++++|+..      .++.+..         +    ...+.
T Consensus         1 M~~~~~-l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~~---------~----~~~~~   57 (270)
T 1yde_A            1 MATGTR-YAGKVVVVTGGGRGIGAGIVRAFVNSGA---RVVICDKDES------GGRALEQ---------E----LPGAV   57 (270)
T ss_dssp             ---CCT-TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH---------H----CTTEE
T ss_pred             CCCCCC-CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH---------H----hcCCe
Confidence            434433 7889999999999999999999999986   6788887532      2222111         0    13478


Q ss_pred             EEEcccCCCCCCCChhHHHHHhc-------cccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc--C
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM--K  143 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~--~  143 (152)
                      ++.+|+++++      ++.++++       ++|++|||||....        .+.++..+++|+.++.++++++.+.  .
T Consensus        58 ~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  131 (270)
T 1yde_A           58 FILCDVTQED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK  131 (270)
T ss_dssp             EEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            8999999854      4554443       78999999996431        3567889999999999999998642  1


Q ss_pred             CCcceEecC
Q psy11862        144 KLVVSLDIG  152 (152)
Q Consensus       144 ~~~~~v~~S  152 (152)
                      +.+++|++|
T Consensus       132 ~~g~iv~is  140 (270)
T 1yde_A          132 SQGNVINIS  140 (270)
T ss_dssp             HTCEEEEEC
T ss_pred             CCCEEEEEc
Confidence            236888876

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.70  E-value=1.2e-16  Score=127.56  Aligned_cols=124  Identities=18%  Similarity=0.179  Sum_probs=91.2

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-HHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-PKARLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      +...+++|+|+||||+|+||++++++|++.|+   .|++++|+..... ..+.+..+.               ..++.++
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~~~---------------~~~v~~v   66 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGY---DCVVADNLSNSTYDSVARLEVLT---------------KHHIPFY   66 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTHHHHHHHHHH---------------TSCCCEE
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCCcchHHHHHHHhhcc---------------CCceEEE
Confidence            34446789999999999999999999999986   7788888654321 112221110               2467788


Q ss_pred             EcccCCCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         83 EGDILQANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        83 ~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .+|+++++      ++.++++  ++|+|||+||....   .......+++|+.++.++++++.+. ++++||++|
T Consensus        67 ~~Dl~d~~------~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~S  134 (699)
T 1z45_A           67 EVDLCDRK------GLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSS  134 (699)
T ss_dssp             ECCTTCHH------HHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             EcCCCCHH------HHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence            99999854      6777777  89999999997653   2345568899999999999999887 678999986

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.70  E-value=2.3e-16  Score=112.82  Aligned_cols=113  Identities=13%  Similarity=0.209  Sum_probs=87.3

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ...++|+++||||+|+||++++++|++.|+   +|++++|+....                         ......+.+|
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~-------------------------~~~~~~~~~D   61 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGA---KVVSVSLDEKSD-------------------------VNVSDHFKID   61 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCC--C-------------------------TTSSEEEECC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCchhc-------------------------cCceeEEEec
Confidence            457899999999999999999999999996   678888865421                         1345678899


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++++      ++.+++       .++|++|||||....       .+.++..+++|+.+++++++++.+.   .+.+++
T Consensus        62 v~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i  135 (269)
T 3vtz_A           62 VTNEE------EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSI  135 (269)
T ss_dssp             TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEE
Confidence            99854      454444       378999999997542       4667889999999999999987652   245688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       136 v~is  139 (269)
T 3vtz_A          136 INIA  139 (269)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8876

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.70  E-value=2.5e-16  Score=113.41  Aligned_cols=131  Identities=15%  Similarity=0.118  Sum_probs=92.6

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC----------CCHHHHHHHHhcChhhhhhhhhcc
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG----------LTPKARLAEFSKLPVFERLRKECP   73 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~   73 (152)
                      |...+++++++||||+|+||++++++|++.|+   +|++++|+...          ....+.+.+...         ...
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~   72 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGA---DIIAVDICKPIRAGVVDTAIPASTPEDLAETAD---------LVK   72 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHH---------HHH
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeccccccccccccccccCCHHHHHHHHH---------HHh
Confidence            34457899999999999999999999999996   77888876321          011233332211         011


Q ss_pred             ccCCcEEEEEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHH
Q psy11862         74 AQLSRLHIIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDI  138 (152)
Q Consensus        74 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~  138 (152)
                      ....++.++.+|+++++      ++.+++       .++|++|||||...        ..+.++..+++|+.++++++++
T Consensus        73 ~~~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~  146 (286)
T 3uve_A           73 GHNRRIVTAEVDVRDYD------ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKA  146 (286)
T ss_dssp             TTTCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             hcCCceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHH
Confidence            12367899999999864      455444       37899999999643        1466788999999999999998


Q ss_pred             HHhc----CCCcceEecC
Q psy11862        139 ALKM----KKLVVSLDIG  152 (152)
Q Consensus       139 ~~~~----~~~~~~v~~S  152 (152)
                      +.+.    +...++|++|
T Consensus       147 ~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A          147 GVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             HHHHHHHHTSCEEEEEEC
T ss_pred             HHHHHHhCCCCcEEEEEC
Confidence            8652    1245888876

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.70  E-value=1.3e-16  Score=113.40  Aligned_cols=121  Identities=19%  Similarity=0.158  Sum_probs=86.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|+++|+   +|++. .|+..  ...+....+..             ...++.++.+|+
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~---~vv~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dv   63 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGY---NIVINYARSKK--AALETAEEIEK-------------LGVKVLVVKANV   63 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHHHT-------------TTCCEEEEECCT
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCC
Confidence            3678999999999999999999999996   55664 55422  11121122211             136789999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.|+..+++|+.+++++++++.+.   .+..+||
T Consensus        64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv  137 (258)
T 3oid_A           64 GQPA------KIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIV  137 (258)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            9964      454444       36799999998643       25667889999999999999998542   2456888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       138 ~is  140 (258)
T 3oid_A          138 SIS  140 (258)
T ss_dssp             EEE
T ss_pred             EEC
Confidence            875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.70  E-value=1.4e-16  Score=118.49  Aligned_cols=123  Identities=23%  Similarity=0.227  Sum_probs=88.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++||||+|+||++++++|++.|+   .|++++|+..... .+.+..+...     ..   .....++.++.+|+++++
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-~~~~~~l~~~-----~~---~~~~~~~~~~~~Dl~d~~   92 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGY---EVHGIVRRSSSFN-TGRIEHLYKN-----PQ---AHIEGNMKLHYGDLTDST   92 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCC-CTTTGGGC-----------------CEEEEECCTTCHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCccccc-hhhHHHHhhh-----hc---cccCCCceEEEccCCCHH
Confidence            6899999999999999999999986   7888888754210 0011111000     00   001246888999999854


Q ss_pred             CCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCC---cceEecC
Q psy11862         91 LGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKL---VVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~S  152 (152)
                            ++.+++++  +|+|||+||....   ..++...+++|+.++.++++++.+. ++   ++||++|
T Consensus        93 ------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~S  155 (375)
T 1t2a_A           93 ------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQAS  155 (375)
T ss_dssp             ------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEE
T ss_pred             ------HHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEec
Confidence                  67777775  6999999997654   3566778999999999999999986 45   7999886

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.70  E-value=2.1e-16  Score=112.39  Aligned_cols=122  Identities=25%  Similarity=0.338  Sum_probs=88.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.+++++||||+|+||++++++|++.|+   +|++++|+..  ...+.+.+...            ....++.++.+|++
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~---~v~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dl~   67 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGY---SVTVTYHSDT--TAMETMKETYK------------DVEERLQFVQADVT   67 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHTG------------GGGGGEEEEECCTT
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCC---EEEEEcCCCh--HHHHHHHHHHH------------hcCCceEEEEecCC
Confidence            3578999999999999999999999986   6777766543  22233322211            11357899999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccc--cc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAAS--LK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~--~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++      ++.++++       ++|++|||||.  ..       ..+.+...+++|+.++.++++++.+.   .+.+++
T Consensus        68 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~i  141 (264)
T 3i4f_A           68 KKE------DLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRI  141 (264)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeE
Confidence            865      4555443       78999999993  21       24667889999999999999998421   245788


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       142 v~is  145 (264)
T 3i4f_A          142 INYG  145 (264)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            8875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.70  E-value=1.5e-16  Score=113.48  Aligned_cols=123  Identities=20%  Similarity=0.225  Sum_probs=88.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++.         ..  ....++.++.+|++
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~---------~~--~~~~~~~~~~~D~~   74 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGA---KLSLVDVSSE--GLEASKAAVL---------ET--APDAEVLTTVADVS   74 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHH---------HH--CTTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHH---------hh--cCCceEEEEEccCC
Confidence            6789999999999999999999999986   6788888532  1111111111         00  01256888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      ++.++++       ++|++|||||....        .+.++..+++|+.+++.+.+++.+.   .+.+++|
T Consensus        75 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv  148 (267)
T 1iy8_A           75 DEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVV  148 (267)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence            854      4555443       78999999996432        4667889999999999887776431   2457888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       149 ~is  151 (267)
T 1iy8_A          149 NTA  151 (267)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.70  E-value=1.1e-17  Score=129.26  Aligned_cols=129  Identities=22%  Similarity=0.263  Sum_probs=88.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++|+||||+|+||++++++|.+.|+   .|++++|+.......+++.+.....+....   ......++.++.+|+++
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~---~~~~~~~v~~v~~Dl~d  222 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSH---RIYCFIRADNEEIAWYKLMTNLNDYFSEET---VEMMLSNIEVIVGDFEC  222 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEE---EEEEEEESSSHHHHHHHHHHHHHHHSCHHH---HHHHSTTEEEEEEBTTB
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCC---EEEEEECCCChHHHHHHHHHHHHHhccccc---chhccCceEEEecCCcc
Confidence            468999999999999999999988775   889999976532233333222111000000   01123689999999999


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++.      +. ...++|+|||+||..+...++..++++|+.++.++++++.+  +.++|||+|
T Consensus       223 ~~~------l~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iS  277 (508)
T 4f6l_B          223 MDD------VV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVS  277 (508)
T ss_dssp             CSS------CC-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEE
T ss_pred             ccc------CC-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeC
Confidence            542      23 66789999999998877777788899999999999999988  457999986

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.70  E-value=2e-16  Score=112.91  Aligned_cols=124  Identities=19%  Similarity=0.194  Sum_probs=90.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++.+|+..  ...+...++..         .  .....+..+.+|+
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~---------~--~~~~~~~~~~~D~   70 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGA---NVLINGRREE--NVNETIKEIRA---------Q--YPDAILQPVVADL   70 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHH--HHHHHHHHHHH---------H--CTTCEEEEEECCT
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh---------h--CCCceEEEEecCC
Confidence            36789999999999999999999999996   6788888633  22222222211         0  0125678889999


Q ss_pred             CCCCCCCChhHHHHHh---ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQ---EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~---~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      ++++      ++.+++   .++|++|||||....       .+.|+..+++|+.+++++.+++.+.   .+.+++|++|
T Consensus        71 ~~~~------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~is  143 (267)
T 3t4x_A           71 GTEQ------GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIA  143 (267)
T ss_dssp             TSHH------HHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEEC
T ss_pred             CCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEc
Confidence            9854      454444   489999999997542       5677889999999999998887542   2456888876

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.70  E-value=1.3e-16  Score=112.13  Aligned_cols=119  Identities=20%  Similarity=0.247  Sum_probs=85.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEE-eecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYI-LCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +++++||||+|+||++++++|++.|+   +|++ ..|+..  ...+...++..             ...++.++.+|+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~---~v~~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~~   62 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC---KVLVNYARSAK--AAEEVSKQIEA-------------YGGQAITFGGDVSK   62 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHHHH-------------HTCEEEEEECCTTS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHHh-------------cCCcEEEEeCCCCC
Confidence            57899999999999999999999986   5666 356422  11111111110             12568889999998


Q ss_pred             CCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         89 ANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      ++      ++.++++       ++|++||+||...       ..+.++..+++|+.++.++++++.+.   .+.++||++
T Consensus        63 ~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~  136 (244)
T 1edo_A           63 EA------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINI  136 (244)
T ss_dssp             HH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            54      4555544       7899999999754       24567789999999999999988653   246789987


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       137 s  137 (244)
T 1edo_A          137 A  137 (244)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.69  E-value=9.4e-17  Score=112.93  Aligned_cols=113  Identities=17%  Similarity=0.147  Sum_probs=88.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhh--CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRS--CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+|+||++++++|++.  |+   .|++++|++.      .+..+                ..++.++.+|
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~---~V~~~~r~~~------~~~~~----------------~~~~~~~~~D   56 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKF---VAKGLVRSAQ------GKEKI----------------GGEADVFIGD   56 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTC---EEEEEESCHH------HHHHT----------------TCCTTEEECC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCc---EEEEEEcCCC------chhhc----------------CCCeeEEEec
Confidence            46789999999999999999999998  55   7888888532      12111                1456688999


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccch----------------hhHHHHHHhhhHHHHHHHHHHHhcCCCcceE
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKLE----------------AELKENVAANTRGTQRLLDIALKMKKLVVSL  149 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~----------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v  149 (152)
                      +++++      ++.++++++|+|||+||.....                ..+...+++|+.++.++++++.+. +.++||
T Consensus        57 ~~d~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv  129 (253)
T 1xq6_A           57 ITDAD------SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIV  129 (253)
T ss_dssp             TTSHH------HHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEE
T ss_pred             CCCHH------HHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEE
Confidence            99854      7889999999999999865321                112246799999999999999987 678999


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       130 ~~S  132 (253)
T 1xq6_A          130 VVG  132 (253)
T ss_dssp             EEE
T ss_pred             EEc
Confidence            876

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.69  E-value=2.5e-16  Score=110.98  Aligned_cols=124  Identities=16%  Similarity=0.151  Sum_probs=87.6

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+....+..            .......++.+|
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~d   72 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGA---SVVLLGRTEA--SLAEVSDQIKS------------AGQPQPLIIALN   72 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH------------TTSCCCEEEECC
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEecCHH--HHHHHHHHHHh------------cCCCCceEEEec
Confidence            457899999999999999999999999996   6788888632  11222222211            112456677777


Q ss_pred             c--CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC
Q psy11862         86 I--LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKL  145 (152)
Q Consensus        86 ~--~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~  145 (152)
                      +  ++.+      ++.+++       .++|++|||||...        ..+.++..+++|+.++.++++++.+.   .+.
T Consensus        73 ~d~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  146 (247)
T 3i1j_A           73 LENATAQ------QYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSED  146 (247)
T ss_dssp             TTTCCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred             cccCCHH------HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence            7  5533      444433       47899999999742        24677889999999999999998542   245


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      +++|++|
T Consensus       147 ~~iv~is  153 (247)
T 3i1j_A          147 ASIAFTS  153 (247)
T ss_dssp             EEEEEEC
T ss_pred             CeEEEEc
Confidence            6888875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.69  E-value=4.2e-16  Score=110.36  Aligned_cols=121  Identities=19%  Similarity=0.219  Sum_probs=88.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|++  .|++++|+..    .+.++++..         ..  ...++.++.+|++
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~--~v~~~~r~~~----~~~~~~l~~---------~~--~~~~~~~~~~D~~   65 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVEN----PTALAELKA---------IN--PKVNITFHTYDVT   65 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCC----HHHHHHHHH---------HC--TTSEEEEEECCTT
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCc--EEEEEecCch----HHHHHHHHH---------hC--CCceEEEEEEecC
Confidence            67899999999999999999999999862  4777888653    122222211         00  0246889999999


Q ss_pred             CC-CCCCChhHHHHHh-------ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcC---C---CcceEecC
Q psy11862         88 QA-NLGIKDSDLLMLQ-------EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMK---K---LVVSLDIG  152 (152)
Q Consensus        88 ~~-~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~---~~~~v~~S  152 (152)
                      ++ +      ++.+++       .++|++|||||... .+.++..+++|+.++.++++++.+.-   +   .+++|++|
T Consensus        66 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~is  137 (254)
T 1sby_A           66 VPVA------ESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC  137 (254)
T ss_dssp             SCHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CChH------HHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence            86 4      344333       47899999999764 56788899999999999999987531   1   35688876

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.69  E-value=2.5e-16  Score=112.64  Aligned_cols=122  Identities=18%  Similarity=0.221  Sum_probs=89.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++.+|+..  ...+.+.+..            .....++.++.+|++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~------------~~~~~~~~~~~~D~~   89 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGL---KVWINYRSNA--EVADALKNEL------------EEKGYKAAVIKFDAA   89 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHH------------HHTTCCEEEEECCTT
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCH--HHHHHHHHHH------------HhcCCceEEEECCCC
Confidence            6789999999999999999999999986   6788888532  1122222111            111367889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++|||||....       .+.+...+++|+.++.++++++.+.   .+.+++|+
T Consensus        90 ~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~  163 (271)
T 4iin_A           90 SES------DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVN  163 (271)
T ss_dssp             CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEE
Confidence            854      454444       378999999997542       4677889999999999998887642   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       164 is  165 (271)
T 4iin_A          164 VA  165 (271)
T ss_dssp             EC
T ss_pred             Ee
Confidence            76

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.69  E-value=3.9e-16  Score=110.43  Aligned_cols=111  Identities=16%  Similarity=0.197  Sum_probs=86.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+....                         ...+.++.+|++
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~~-------------------------~~~~~~~~~D~~   56 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGA---KVTGFDQAFTQE-------------------------QYPFATEVMDVA   56 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCCCSS-------------------------CCSSEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCchhhh-------------------------cCCceEEEcCCC
Confidence            6789999999999999999999999986   778888864310                         012678889999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.+++|+
T Consensus        57 d~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~  130 (250)
T 2fwm_X           57 DAA------QVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVT  130 (250)
T ss_dssp             CHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            854      4555543       7899999999753       24678889999999999999988431   24578888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       131 is  132 (250)
T 2fwm_X          131 VA  132 (250)
T ss_dssp             EC
T ss_pred             EC
Confidence            76

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.69  E-value=1.5e-16  Score=111.37  Aligned_cols=110  Identities=20%  Similarity=0.190  Sum_probs=82.7

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++++++||||+|+||++++++|+++|+   +|++.+|+..  ...+...++..            ....++.++.+|+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~D~~~   63 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGY---ALALGARSVD--RLEKIAHELMQ------------EQGVEVFYHHLDVSK   63 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH------------HHCCCEEEEECCTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh------------hcCCeEEEEEeccCC
Confidence            468999999999999999999999996   6788888532  11221122110            113678899999998


Q ss_pred             CCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         89 ANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      ++      ++.++++       ++|++|||||...       ..+.+...+++|+.++.++++++.+
T Consensus        64 ~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  124 (235)
T 3l77_A           64 AE------SVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLD  124 (235)
T ss_dssp             HH------HHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HH------HHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            54      5655554       7899999999753       2567788999999999999999865

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.69  E-value=2.9e-16  Score=112.65  Aligned_cols=131  Identities=14%  Similarity=0.106  Sum_probs=91.4

Q ss_pred             cccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-------CHHHHHHHHhcChhhhhhhhhccccC
Q psy11862          4 VARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-------TPKARLAEFSKLPVFERLRKECPAQL   76 (152)
Q Consensus         4 ~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (152)
                      |...+++++++||||+|+||++++++|+++|+   +|++++|+....       ...+.+.+...     .+    ....
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~   72 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGA---DIIAVDIAGKLPSCVPYDPASPDDLSETVR-----LV----EAAN   72 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCCTTCCSCCCCHHHHHHHHH-----HH----HHTT
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeccccccccccccccCHHHHHHHHH-----HH----HhcC
Confidence            34457899999999999999999999999996   678887742210       01222222211     00    1113


Q ss_pred             CcEEEEEcccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         77 SRLHIIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        77 ~~~~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      .++.++.+|+++++      ++.+++       .++|++|||||....       .+.++..+++|+.+++++++++.+.
T Consensus        73 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  146 (277)
T 3tsc_A           73 RRIVAAVVDTRDFD------RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPR  146 (277)
T ss_dssp             CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            67889999999854      454444       368999999997542       5678889999999999999987542


Q ss_pred             ----CCCcceEecC
Q psy11862        143 ----KKLVVSLDIG  152 (152)
Q Consensus       143 ----~~~~~~v~~S  152 (152)
                          +...+||++|
T Consensus       147 ~~~~~~~g~iv~is  160 (277)
T 3tsc_A          147 IIEGGRGGSIILIS  160 (277)
T ss_dssp             HHHHTSCEEEEEEC
T ss_pred             HHhcCCCCEEEEEc
Confidence                1245888876

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.69  E-value=3.4e-16  Score=112.60  Aligned_cols=121  Identities=19%  Similarity=0.211  Sum_probs=89.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH-HHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+.+ +.+..             ...++.++.+|+
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~~-------------~~~~~~~~~~D~   88 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGC---KVIVNYANST--ESAEEVVAAIKK-------------NGSDAACVKANV   88 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCch--HHHHHHHHHHHH-------------hCCCeEEEEcCC
Confidence            6789999999999999999999999986   6788887642  111111 11111             135788899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI  151 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~  151 (152)
                      ++++      ++.+++       .++|++|||||....       .+.++..+++|+.+++++++++.+. .+.+++|++
T Consensus        89 ~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i  162 (283)
T 1g0o_A           89 GVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM  162 (283)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence            9854      344433       478999999997532       5677889999999999999999874 234688887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       163 s  163 (283)
T 1g0o_A          163 G  163 (283)
T ss_dssp             C
T ss_pred             e
Confidence            6

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.69  E-value=2.4e-16  Score=111.38  Aligned_cols=118  Identities=19%  Similarity=0.229  Sum_probs=86.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcE-EEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRL-HIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..      .+.....     .+       ..++ .++.+|+
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~------~~~~~~~-----~~-------~~~~~~~~~~D~   67 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGA---RLILIDREAA------ALDRAAQ-----EL-------GAAVAARIVADV   67 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH-----HH-------GGGEEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH-----Hh-------cccceeEEEEec
Confidence            6789999999999999999999999986   6888888532      1221110     00       1345 7889999


Q ss_pred             CCCCCCCChhHHHHHh------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         87 LQANLGIKDSDLLMLQ------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      ++++      ++.+++      .++|++||+||....       .+.++..+++|+.++.++++++.+.   .+.++||+
T Consensus        68 ~~~~------~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~  141 (254)
T 2wsb_A           68 TDAE------AMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVN  141 (254)
T ss_dssp             TCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCHH------HHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            9854      455444      578999999997532       4567789999999999888876531   24678888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       142 is  143 (254)
T 2wsb_A          142 LG  143 (254)
T ss_dssp             EC
T ss_pred             Ee
Confidence            76

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.69  E-value=4.9e-16  Score=110.25  Aligned_cols=115  Identities=19%  Similarity=0.235  Sum_probs=85.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+.     .+....+                ..++.++.+|++
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~-----~~~~~~~----------------~~~~~~~~~D~~   62 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGA---QVVVLDIRG-----EDVVADL----------------GDRARFAAADVT   62 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSC-----HHHHHHT----------------CTTEEEEECCTT
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCch-----HHHHHhc----------------CCceEEEECCCC
Confidence            6789999999999999999999999996   778888732     1111111                257889999999


Q ss_pred             CCCCCCChhHHHHHhc------cccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc--------
Q psy11862         88 QANLGIKDSDLLMLQE------EVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM--------  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~------~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~--------  142 (152)
                      +++      ++.++++      ++|++|||||...           ..+.++..+++|+.+++++++++.+.        
T Consensus        63 ~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~  136 (257)
T 3tl3_A           63 DEA------AVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVG  136 (257)
T ss_dssp             CHH------HHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC-
T ss_pred             CHH------HHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccc
Confidence            865      4554443      8999999999643           24567889999999999999998753        


Q ss_pred             ---CCCcceEecC
Q psy11862        143 ---KKLVVSLDIG  152 (152)
Q Consensus       143 ---~~~~~~v~~S  152 (152)
                         .+..++|++|
T Consensus       137 ~~~~~~g~iv~is  149 (257)
T 3tl3_A          137 PNAEERGVIINTA  149 (257)
T ss_dssp             -CCCCSEEEEEEC
T ss_pred             cccCCCcEEEEEc
Confidence               1235788875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.69  E-value=3e-16  Score=110.32  Aligned_cols=118  Identities=21%  Similarity=0.251  Sum_probs=88.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhC--CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSC--PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g--~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      |++++++||||+|+||++++++|++.|  +   .|++++|+....   +.+.+.               ...++.++.+|
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~---~V~~~~r~~~~~---~~l~~~---------------~~~~~~~~~~D   59 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIR---HIIATARDVEKA---TELKSI---------------KDSRVHVLPLT   59 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCC---EEEEEESSGGGC---HHHHTC---------------CCTTEEEEECC
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCc---EEEEEecCHHHH---HHHHhc---------------cCCceEEEEee
Confidence            467899999999999999999999998  5   778888864321   122111               13578899999


Q ss_pred             cCCCCCCCChhHHHHHhc---------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---C--
Q psy11862         86 ILQANLGIKDSDLLMLQE---------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---K--  143 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~---------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~--  143 (152)
                      +++++      ++.++++         ++|++||+||...        ..+.+...+++|+.++.++++++.+.   .  
T Consensus        60 ~~~~~------~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  133 (250)
T 1yo6_A           60 VTCDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAAS  133 (250)
T ss_dssp             TTCHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHH
T ss_pred             cCCHH------HHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence            99854      4555444         7999999999754        24567789999999999999887642   1  


Q ss_pred             ----C-----CcceEecC
Q psy11862        144 ----K-----LVVSLDIG  152 (152)
Q Consensus       144 ----~-----~~~~v~~S  152 (152)
                          +     .++||++|
T Consensus       134 ~~~~~~~~~~~~~iv~is  151 (250)
T 1yo6_A          134 KESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             SSCSSCCCTTTCEEEEEC
T ss_pred             ccCCCcccCCCcEEEEec
Confidence                2     56888876

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.69  E-value=2.4e-17  Score=119.28  Aligned_cols=104  Identities=16%  Similarity=0.160  Sum_probs=81.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .|++|+|+||||+|+||++++++|++.|+         +...                          ....+..+.+|+
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~~--------------------------~~~~~~~~~~D~   47 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG---------LPGE--------------------------DWVFVSSKDADL   47 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTTC--------------------------EEEECCTTTCCT
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC---------cccc--------------------------cccccCceeccc
Confidence            36789999999999999999999999985         1000                          001233346788


Q ss_pred             CCCCCCCChhHHHHHhcc--ccEEEecccccc----chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEE--VSVVFNGAASLK----LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~--~d~vi~~a~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++++      .+.+++++  +|+|||+|+...    ...++...+++|+.++.++++++.+. ++++|||+|
T Consensus        48 ~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~S  112 (319)
T 4b8w_A           48 TDTA------QTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCL  112 (319)
T ss_dssp             TSHH------HHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred             CCHH------HHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEc
Confidence            8854      68888876  999999999864    24566778999999999999999997 688999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.69  E-value=2e-16  Score=111.37  Aligned_cols=122  Identities=22%  Similarity=0.258  Sum_probs=88.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..  ...+....+         ...   ...++.++.+|++
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~---------~~~---~~~~~~~~~~D~~   67 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGS---TVIITGTSGE--RAKAVAEEI---------ANK---YGVKAHGVEMNLL   67 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHH--HHHHHHHHH---------HHH---HCCCEEEEECCTT
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCChH--HHHHHHHHH---------Hhh---cCCceEEEEccCC
Confidence            6789999999999999999999999986   6788888532  111111111         000   1256888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++||+||...       ..+.+...+++|+.++.++++++.+.   .+.++||+
T Consensus        68 ~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~  141 (248)
T 2pnf_A           68 SEE------SINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVN  141 (248)
T ss_dssp             CHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            854      5555554       7899999999653       24567789999999998888776431   24678998


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       142 ~s  143 (248)
T 2pnf_A          142 IS  143 (248)
T ss_dssp             EC
T ss_pred             Ec
Confidence            76

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.69  E-value=2.1e-16  Score=113.69  Aligned_cols=123  Identities=22%  Similarity=0.169  Sum_probs=85.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++.+|+..  ...+...++..         .   ....+.++.+|+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~~~~---------~---~~~~~~~~~~Dv   92 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGY---SVVITGRRPD--VLDAAAGEIGG---------R---TGNIVRAVVCDV   92 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH---------H---HSSCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh---------c---CCCeEEEEEcCC
Confidence            36789999999999999999999999996   7788888532  11222222111         0   123468899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CC--Cc
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KK--LV  146 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~  146 (152)
                      +|++      ++.+++       .++|++|||||...        ..+.++..+++|+.+++++.+++.+.   .+  ..
T Consensus        93 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g  166 (281)
T 4dry_A           93 GDPD------QVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGG  166 (281)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCc
Confidence            9864      454444       47899999999743        15678889999999999998887642   11  46


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       167 ~IV~is  172 (281)
T 4dry_A          167 RIINNG  172 (281)
T ss_dssp             EEEEEC
T ss_pred             EEEEEC
Confidence            888876

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.69  E-value=1.3e-16  Score=118.26  Aligned_cols=123  Identities=22%  Similarity=0.215  Sum_probs=86.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ||+++||||+|+||++++++|++.|+   .|++++|+..... .+.+..+...         ......++.++.+|++++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~~Dl~d~   67 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGY---EVHGIKRRASSFN-TERVDHIYQD---------PHTCNPKFHLHYGDLSDT   67 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECC-------------------------------CCEEECCCCSSCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCCcccc-hHHHHHHhhc---------cccCCCceEEEECCCCCH
Confidence            47899999999999999999999986   7888888654210 1112111100         000124688889999985


Q ss_pred             CCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCC---cceEecC
Q psy11862         90 NLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKL---VVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~S  152 (152)
                      +      ++.+++++  +|+|||+||....   ..++...+++|+.++.++++++.+. ++   ++||++|
T Consensus        68 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~S  131 (372)
T 1db3_A           68 S------NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQAS  131 (372)
T ss_dssp             H------HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEE
T ss_pred             H------HHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeC
Confidence            4      67777774  7999999997543   3456778899999999999999986 55   7999886

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.69  E-value=5.9e-16  Score=109.40  Aligned_cols=115  Identities=23%  Similarity=0.271  Sum_probs=87.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +|+++||||+++||+++++.|++.|+   +|++.+|++      +.+.++...             ..++..+.+|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga---~V~~~~~~~------~~~~~~~~~-------------~~~~~~~~~Dv~~~   59 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD---KVCFIDIDE------KRSADFAKE-------------RPNLFYFHGDVADP   59 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHTT-------------CTTEEEEECCTTSH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHHh-------------cCCEEEEEecCCCH
Confidence            48999999999999999999999996   778888752      233332221             35788999999996


Q ss_pred             CCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         90 NLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +      +++++       +.++|++|||||....       .++|+.++++|+.+++.+.+++.+.  .+..++|++|
T Consensus        60 ~------~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInis  132 (247)
T 3ged_A           60 L------TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIA  132 (247)
T ss_dssp             H------HHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEe
Confidence            5      44444       3478999999987542       6788999999999999999988653  1236788765

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.69  E-value=5.6e-16  Score=111.03  Aligned_cols=120  Identities=12%  Similarity=0.021  Sum_probs=85.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+...  ..+....+..             ...++.++.+|++
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~--~~~~~~~~~~-------------~~~~~~~~~~Dl~   93 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGA---DVAIWYNSHPA--DEKAEHLQKT-------------YGVHSKAYKCNIS   93 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTC---EEEEEESSSCC--HHHHHHHHHH-------------HCSCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH--HHHHHHHHHh-------------cCCcceEEEeecC
Confidence            6789999999999999999999999986   67888887542  2221111110             1256889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHH----HhcCCCcc
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIA----LKMKKLVV  147 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~  147 (152)
                      +++      ++.++++       ++|++||+||....         .+.+...+++|+.++..+.+.+    .+. +.++
T Consensus        94 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~  166 (279)
T 3ctm_A           94 DPK------SVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGS  166 (279)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCE
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCe
Confidence            854      4555443       58999999996432         3456678999999976555554    443 4678


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      ||++|
T Consensus       167 iv~is  171 (279)
T 3ctm_A          167 LIITS  171 (279)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            98876

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.69  E-value=1.1e-16  Score=119.28  Aligned_cols=122  Identities=21%  Similarity=0.163  Sum_probs=87.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCC-cEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLS-RLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~   89 (152)
                      ++|+||||+||||++++++|++.|+   .|++++|+...... +.+..+..         ....... ++.++.+|++++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~Dl~d~   95 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGY---EVHGLIRRSSNFNT-QRINHIYI---------DPHNVNKALMKLHYADLTDA   95 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCC-TTTTTTC-----------------CCEEEEECCTTCH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC---EEEEEecCCccccc-hhhhhhhh---------ccccccccceEEEECCCCCH
Confidence            6899999999999999999999986   78888887542100 00000000         0000012 688899999885


Q ss_pred             CCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCc-----ceEecC
Q psy11862         90 NLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLV-----VSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~S  152 (152)
                      +      ++.+++++  +|+|||+||....   ..++...+++|+.++.++++++.+. +++     +||++|
T Consensus        96 ~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~S  161 (381)
T 1n7h_A           96 S------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAG  161 (381)
T ss_dssp             H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEE
T ss_pred             H------HHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeC
Confidence            4      67777775  6999999997654   3567778999999999999999876 344     899876

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.69  E-value=1.5e-16  Score=115.13  Aligned_cols=123  Identities=15%  Similarity=0.114  Sum_probs=89.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++.+|+..... .+.+.+..            .....++.++.+|++
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~~-~~~~~~~~------------~~~~~~~~~~~~Dv~  110 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREGA---DVAINYLPAEEED-AQQVKALI------------EECGRKAVLLPGDLS  110 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCGGGHHH-HHHHHHHH------------HHTTCCEEECCCCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcchhH-HHHHHHHH------------HHcCCcEEEEEecCC
Confidence            5789999999999999999999999996   6777776532111 11121111            111367889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEec
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKMK-KLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~  151 (152)
                      +++      ++.+++       .++|++|||||...        ..+.+...+++|+.+++++++++.+.- +..+||++
T Consensus       111 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i  184 (294)
T 3r3s_A          111 DES------FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT  184 (294)
T ss_dssp             SHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence            854      444443       47899999999743        256778899999999999999998642 22488887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       185 s  185 (294)
T 3r3s_A          185 S  185 (294)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.69  E-value=2.3e-16  Score=112.56  Aligned_cols=122  Identities=19%  Similarity=0.171  Sum_probs=88.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+.. ....+...++..             ...++.++.+|++
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~---~v~~~~r~~~-~~~~~~~~~l~~-------------~~~~~~~~~~D~~   81 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGA---SVVVNYGSSS-KAAEEVVAELKK-------------LGAQGVAIQADIS   81 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCH-HHHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCch-HHHHHHHHHHHh-------------cCCcEEEEEecCC
Confidence            6788999999999999999999999986   6778887321 011111111111             1356888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKMK-KLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  152 (152)
                      +++      ++.++++       ++|++||+||...       ..+.++..+++|+.++.++++++.+.- ..++||++|
T Consensus        82 ~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s  155 (274)
T 1ja9_A           82 KPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS  155 (274)
T ss_dssp             SHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEc
Confidence            854      4555554       7899999999653       245677899999999999999987641 115888876

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.69  E-value=3.2e-16  Score=111.80  Aligned_cols=123  Identities=12%  Similarity=0.098  Sum_probs=86.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+.+++++||||+|+||++++++|+++|+   +|+++.++.. ....+....+..             ...++.++.+|+
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~---~v~i~~~r~~-~~~~~~~~~l~~-------------~~~~~~~~~~Dl   85 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGF---NIGVHYHRDA-AGAQETLNAIVA-------------NGGNGRLLSFDV   85 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCH-HHHHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCch-HHHHHHHHHHHh-------------cCCceEEEEecC
Confidence            46778999999999999999999999997   5555443321 112222222211             136789999999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcce
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~  148 (152)
                      ++++      ++.++++       ++|++|||||...       ..+.+...+++|+.++.++++++..    ..+..++
T Consensus        86 ~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~i  159 (267)
T 4iiu_A           86 ANRE------QCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRI  159 (267)
T ss_dssp             TCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence            9854      4544443       7899999999754       2567788999999999999998742    2245788


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       160 v~is  163 (267)
T 4iiu_A          160 ITLS  163 (267)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            8876

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.69  E-value=1.1e-16  Score=116.35  Aligned_cols=105  Identities=21%  Similarity=0.244  Sum_probs=85.0

Q ss_pred             eEEEcCCcchhHHHHHHHHHhh--CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRS--CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++||||+|+||++++++|++.  |+   .|++++|+....                          ..+.++.+|++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~--------------------------~~~~~~~~D~~d~   51 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKK---NVIASDIVQRDT--------------------------GGIKFITLDVSNR   51 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGG---GEEEEESSCCCC--------------------------TTCCEEECCTTCH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCC---EEEEecCCCccc--------------------------cCceEEEecCCCH
Confidence            4899999999999999999998  65   577787764321                          1345788999885


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc--hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL--EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++  ++|+|||+|+....  ..++...+++|+.++.++++++.+. ++++||++|
T Consensus        52 ~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~S  111 (317)
T 3ajr_A           52 D------EIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPS  111 (317)
T ss_dssp             H------HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             H------HHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEec
Confidence            4      6788777  89999999997542  3456778999999999999999987 688999986

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.69  E-value=3.5e-16  Score=110.36  Aligned_cols=120  Identities=20%  Similarity=0.251  Sum_probs=87.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++.             . ..++.++.+|++
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~-------------~-~~~~~~~~~D~~   64 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGA---KVMITGRHSD--VGEKAAKSVG-------------T-PDQIQFFQHDSS   64 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHC-------------C-TTTEEEEECCTT
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHhh-------------c-cCceEEEECCCC
Confidence            6789999999999999999999999986   6788888532  1111111110             0 146889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC-cceE
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKL-VVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v  149 (152)
                      +++      ++.++++       ++|++||+||...       ..+.+...+++|+.++.++.+++.+.   .+. ++||
T Consensus        65 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv  138 (251)
T 1zk4_A           65 DED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASII  138 (251)
T ss_dssp             CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            854      4554443       5899999999653       24567889999999999888877542   234 6888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       139 ~is  141 (251)
T 1zk4_A          139 NMS  141 (251)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            876

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.69  E-value=1e-16  Score=118.16  Aligned_cols=114  Identities=18%  Similarity=0.186  Sum_probs=81.8

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-HHHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-PKARLAEFSKLPVFERLRKECPAQLSRL   79 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (152)
                      |+.....|.+++|+||||+|++|++++++|++.|+   .|++++|+..... ..+.+..+.               ..++
T Consensus         1 M~~s~~~M~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~~~~~l~---------------~~~v   62 (346)
T 3i6i_A            1 MTVSPVPSPKGRVLIAGATGFIGQFVATASLDAHR---PTYILARPGPRSPSKAKIFKALE---------------DKGA   62 (346)
T ss_dssp             ----------CCEEEECTTSHHHHHHHHHHHHTTC---CEEEEECSSCCCHHHHHHHHHHH---------------HTTC
T ss_pred             CCCCCCCCCCCeEEEECCCcHHHHHHHHHHHHCCC---CEEEEECCCCCChhHHHHHHHHH---------------hCCc
Confidence            44445557778999999999999999999999986   6789999764211 111122221               1578


Q ss_pred             EEEEcccCCCCCCCChhHHHHHhc--cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEe
Q psy11862         80 HIIEGDILQANLGIKDSDLLMLQE--EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLD  150 (152)
Q Consensus        80 ~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  150 (152)
                      .++.+|++|.+      ++.++++  ++|+|||+++..            |+.++.++++++.+.+.+++||+
T Consensus        63 ~~~~~Dl~d~~------~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           63 IIVYGLINEQE------AMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             EEEECCTTCHH------HHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             EEEEeecCCHH------HHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee
Confidence            89999999844      7899999  999999999863            78888999999999833888876

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.69  E-value=2.2e-16  Score=116.59  Aligned_cols=118  Identities=22%  Similarity=0.311  Sum_probs=88.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |+++||||+||||++++++|++. |+   .|++++|....... +.+..+.              ...++.++.+|++++
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~d~   62 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQD---TVVNIDKLTYAGNL-ESLSDIS--------------ESNRYNFEHADICDS   62 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC---EEEEEECCCTTCCG-GGGTTTT--------------TCTTEEEEECCTTCH
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCC---eEEEEecCCCCCch-hhhhhhh--------------cCCCeEEEECCCCCH
Confidence            46999999999999999999998 55   77888886432111 1111110              025788999999985


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhc-CCCc-------ceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKM-KKLV-------VSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~-------~~v~~S  152 (152)
                      +      ++.++++  ++|+|||+||....   ..++..++++|+.++.++++++.+. .+++       +||++|
T Consensus        63 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~S  132 (361)
T 1kew_A           63 A------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIS  132 (361)
T ss_dssp             H------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEE
T ss_pred             H------HHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeC
Confidence            4      6888887  89999999997653   3456778999999999999999875 1344       899886

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.69  E-value=2.1e-16  Score=112.33  Aligned_cols=123  Identities=18%  Similarity=0.207  Sum_probs=88.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+..+++         ...  ....++.++.+|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~---------~~~--~~~~~~~~~~~D~~   68 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGA---RLLLFSRNRE--KLEAAASRI---------ASL--VSGAQVDIVAGDIR   68 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHH---------HHH--STTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHH---------Hhc--CCCCeEEEEEccCC
Confidence            6789999999999999999999999986   6788888532  111111111         100  00136888999999


Q ss_pred             CCCCCCChhHHHHHhc------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQE------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      ++.++++      ++|++|||||...       ..+.++..+++|+.++.++.+++.+.   .+.+++|++
T Consensus        69 ~~~------~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i  142 (260)
T 2z1n_A           69 EPG------DIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYI  142 (260)
T ss_dssp             CHH------HHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            854      5655554      4999999999643       24578889999999999888887542   245789887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       143 s  143 (260)
T 2z1n_A          143 G  143 (260)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.69  E-value=2.3e-16  Score=111.84  Aligned_cols=118  Identities=14%  Similarity=0.109  Sum_probs=86.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..      .+.+....            ...++.++.+|++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~   61 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGA---RVVLADVLDE------EGAATARE------------LGDAARYQHLDVT   61 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHHT------------TGGGEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHHH------------hCCceeEEEecCC
Confidence            6789999999999999999999999986   6788887532      22221110            0146788899999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++++       ++|++|||||...       ..+.++..+++|+.++..+.+++.+.   .+.++||+
T Consensus        62 ~~~------~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~  135 (254)
T 1hdc_A           62 IEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVN  135 (254)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            854      4555544       7999999999653       24567889999999999777765431   14578988


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       136 is  137 (254)
T 1hdc_A          136 IS  137 (254)
T ss_dssp             EC
T ss_pred             EC
Confidence            76

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.69  E-value=3.5e-16  Score=111.81  Aligned_cols=122  Identities=20%  Similarity=0.189  Sum_probs=86.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++..++..  ...+.+.+..            .....++.++.+|++
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~---~Vv~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~~Dl~   87 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF---TVVINYAGKA--AAAEEVAGKI------------EAAGGKALTAQADVS   87 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC---EEEEEESSCS--HHHHHHHHHH------------HHTTCCEEEEECCTT
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEcCCCH--HHHHHHHHHH------------HhcCCeEEEEEcCCC
Confidence            4678999999999999999999999996   5666544322  1122222111            111357889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      +++      ++.+++       .++|++|||||....       .+.|+..+++|+.+++++++++.+. ....++|++|
T Consensus        88 ~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is  161 (267)
T 3u5t_A           88 DPA------AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS  161 (267)
T ss_dssp             CHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence            854      454444       378999999997532       4567889999999999999988763 1235788775

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.69  E-value=2.9e-16  Score=111.36  Aligned_cols=119  Identities=18%  Similarity=0.155  Sum_probs=86.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|++.|+   +|++++|+..  ...+..+++..             ...++.++.+|++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~~~   63 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF---AVAIADYNDA--TAKAVASEINQ-------------AGGHAVAVKVDVSDR   63 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTTSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEecCCCH
Confidence            57899999999999999999999986   6788888532  11111111111             125688899999985


Q ss_pred             CCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceEec
Q psy11862         90 NLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KK-LVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~  151 (152)
                      +      ++.++++       ++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+ .+++|++
T Consensus        64 ~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  137 (256)
T 1geg_A           64 D------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA  137 (256)
T ss_dssp             H------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            4      4555544       7999999999643       14667889999999999998887652   13 4688887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       138 s  138 (256)
T 1geg_A          138 C  138 (256)
T ss_dssp             C
T ss_pred             C
Confidence            5

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.69  E-value=1.7e-16  Score=112.74  Aligned_cols=119  Identities=21%  Similarity=0.285  Sum_probs=89.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+|+||++++++|+++|+   +|++.+|+..      .++++...            ...++.++.+|+
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv   63 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGA---EVLLTGRNES------NIARIREE------------FGPRVHALRSDI   63 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHHH------------HGGGEEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHHH------------hCCcceEEEccC
Confidence            37889999999999999999999999996   7788888532      22222110            025788999999


Q ss_pred             CCCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862         87 LQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI  151 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~  151 (152)
                      ++++      ++.++       +.++|++|||||...       ..+.++..+++|+.+++++++++.+. ....++|++
T Consensus        64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i  137 (255)
T 4eso_A           64 ADLN------EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT  137 (255)
T ss_dssp             TCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence            9854      44433       347899999999754       25678889999999999999999763 123578887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       138 s  138 (255)
T 4eso_A          138 S  138 (255)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.68  E-value=7.8e-16  Score=108.60  Aligned_cols=116  Identities=15%  Similarity=0.089  Sum_probs=87.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+.      +.+.+....              ..+.++.+|++
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~------~~~~~~~~~--------------~~~~~~~~D~~   59 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGA---RLVACDIEE------GPLREAAEA--------------VGAHPVVMDVA   59 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHHT--------------TTCEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH------HHHHHHHHH--------------cCCEEEEecCC
Confidence            5789999999999999999999999986   678888753      222222110              12678899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.+++|+
T Consensus        60 ~~~------~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~  133 (245)
T 1uls_A           60 DPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVL  133 (245)
T ss_dssp             CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            854      454444       36899999999653       24667889999999999999988653   24578888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       134 is  135 (245)
T 1uls_A          134 TA  135 (245)
T ss_dssp             EC
T ss_pred             Ec
Confidence            76

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.68  E-value=3.6e-16  Score=110.33  Aligned_cols=119  Identities=17%  Similarity=0.209  Sum_probs=86.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ..++++++||||+|+||+++++.|++.|+   +|++.+|+..      .+.++..            .....+.++.+|+
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~   69 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS---KVIISGSNEE------KLKSLGN------------ALKDNYTIEVCNL   69 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH------------HHCSSEEEEECCT
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHH------HHHHHHH------------HhccCccEEEcCC
Confidence            46789999999999999999999999986   6788887532      2222111            0124688889999


Q ss_pred             CCCCCCCChhHHHHHhc---cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQE---EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      ++.+      ++.++++   ++|++|||||...       ..+++...+++|+.++.++++++.+.   .+.++||++|
T Consensus        70 ~~~~------~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~is  142 (249)
T 3f9i_A           70 ANKE------ECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINIS  142 (249)
T ss_dssp             TSHH------HHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             CCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            8854      5666655   7899999999754       24677889999999999999887542   2456888876

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.68  E-value=1.7e-16  Score=112.91  Aligned_cols=121  Identities=15%  Similarity=0.128  Sum_probs=89.1

Q ss_pred             ccCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++++++||||+  |+||++++++|+++|+   +|++++|+..   ..+.++++...             ...+.++.+
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~   65 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA---EVALSYQAER---LRPEAEKLAEA-------------LGGALLFRA   65 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTC---EEEEEESCGG---GHHHHHHHHHH-------------TTCCEEEEC
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCCHH---HHHHHHHHHHh-------------cCCcEEEEC
Confidence            3788999999999  9999999999999996   6788888642   22333332110             123678899


Q ss_pred             ccCCCCCCCChhHHHHHhc-------cccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhcC-CC
Q psy11862         85 DILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKMK-KL  145 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~  145 (152)
                      |+++++      ++.++++       ++|++|||||...           ..+.++..+++|+.++.++++++.+.- ..
T Consensus        66 D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  139 (261)
T 2wyu_A           66 DVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG  139 (261)
T ss_dssp             CTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred             CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccC
Confidence            999854      4554443       7899999999643           145677899999999999999997641 12


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      ++||++|
T Consensus       140 g~iv~is  146 (261)
T 2wyu_A          140 GGIVTLT  146 (261)
T ss_dssp             EEEEEEE
T ss_pred             CEEEEEe
Confidence            5788775

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.68  E-value=5.3e-16  Score=113.39  Aligned_cols=128  Identities=11%  Similarity=0.124  Sum_probs=91.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC------HHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT------PKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      .+++++++||||+|+||+++++.|++.|+   +|++++|+....+      ..+.+.+...         .......++.
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~---~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  110 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGA---DIVAIDLCRQQPNLDYAQGSPEELKETVR---------LVEEQGRRII  110 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECCCCCTTCCSCCCCHHHHHHHHH---------HHHHTTCCEE
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC---eEEEEecccccccccccccCHHHHHHHHH---------HHHhcCCeEE
Confidence            36789999999999999999999999996   6777777532211      1233322211         0011236789


Q ss_pred             EEEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----
Q psy11862         81 IIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----  142 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----  142 (152)
                      ++.+|+++++      ++.+++       .++|++|||||...       ..+.|...+++|+.+++++++++.+.    
T Consensus       111 ~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~  184 (317)
T 3oec_A          111 ARQADVRDLA------SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIER  184 (317)
T ss_dssp             EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             EEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence            9999999854      455444       37899999999754       25678889999999999999988642    


Q ss_pred             CCCcceEecC
Q psy11862        143 KKLVVSLDIG  152 (152)
Q Consensus       143 ~~~~~~v~~S  152 (152)
                      +...+||++|
T Consensus       185 ~~~g~Iv~is  194 (317)
T 3oec_A          185 GQGGSVIFVS  194 (317)
T ss_dssp             CSCEEEEEEC
T ss_pred             CCCCEEEEEC
Confidence            1245788876

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.68  E-value=3.4e-16  Score=111.03  Aligned_cols=111  Identities=25%  Similarity=0.235  Sum_probs=85.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++.+|+....                          ..+.++.+|+
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~--------------------------~~~~~~~~Dl   68 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGD---KVAITYRSGEPP--------------------------EGFLAVKCDI   68 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSCCC--------------------------TTSEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHhh--------------------------ccceEEEecC
Confidence            46789999999999999999999999996   678888864311                          2367889999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.++||
T Consensus        69 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv  142 (253)
T 2nm0_A           69 TDTE------QVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVV  142 (253)
T ss_dssp             TSHH------HHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence            9854      454444       35799999999753       24678889999999999999987642   2457888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       143 ~is  145 (253)
T 2nm0_A          143 LIS  145 (253)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            876

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.68  E-value=2.6e-16  Score=111.41  Aligned_cols=124  Identities=15%  Similarity=0.169  Sum_probs=89.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  .+.+..+++..         . .....++.++.+|++
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~---------~-~~~~~~~~~~~~Dv~   69 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGY---RVVLIARSKQ--NLEKVHDEIMR---------S-NKHVQEPIVLPLDIT   69 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTC---EEEEEESCHH--HHHHHHHHHHH---------H-CTTSCCCEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHH---------h-ccccCcceEEeccCC
Confidence            6789999999999999999999999996   7788888642  11221122111         0 001256889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      ++.+++       .++|++|||||....      .+.++..+++|+.+++.+++++.+.   .+.+++|++
T Consensus        70 ~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~i  143 (250)
T 3nyw_A           70 DCT------KADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNV  143 (250)
T ss_dssp             CHH------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence            854      444443       478999999997532      4667889999999999999998542   245688877


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       144 s  144 (250)
T 3nyw_A          144 A  144 (250)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.68  E-value=3.2e-16  Score=111.97  Aligned_cols=110  Identities=21%  Similarity=0.297  Sum_probs=83.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|+....                          .....+.+|++
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~~--------------------------~~~~~~~~Dv~   76 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGA---RVAVADRAVAGI--------------------------AADLHLPGDLR   76 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEECSSCCTTS--------------------------CCSEECCCCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHH--------------------------HhhhccCcCCC
Confidence            6789999999999999999999999996   788888864421                          11233478988


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +.+      ++..+       +.++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.+++|+
T Consensus        77 ~~~------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~  150 (266)
T 3uxy_A           77 EAA------YADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVN  150 (266)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            854      33333       347999999999754       25678889999999999999998431   24578888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       151 is  152 (266)
T 3uxy_A          151 VA  152 (266)
T ss_dssp             EC
T ss_pred             EC
Confidence            76

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.68  E-value=6e-16  Score=109.62  Aligned_cols=123  Identities=16%  Similarity=0.169  Sum_probs=87.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ..++++++||||+|+||++++++|+++|+   +|++.+++.. ....+.+..+...             ..++.++.+|+
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~---~v~~~~~~~~-~~~~~~~~~~~~~-------------~~~~~~~~~Dv   72 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF---RVVAGCGPNS-PRRVKWLEDQKAL-------------GFDFYASEGNV   72 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE---EEEEEECTTC-SSHHHHHHHHHHT-------------TCCCEEEECCT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCH-HHHHHHHHHHHhc-------------CCeeEEEecCC
Confidence            45789999999999999999999999986   6677664332 1233333332211             35788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++.+      ++.+++       .++|++||+||...       ..+.++..+++|+.++.++++++.+.   .+.+++|
T Consensus        73 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv  146 (256)
T 3ezl_A           73 GDWD------STKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRII  146 (256)
T ss_dssp             TCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEE
Confidence            9854      454444       37899999999754       24677889999999999998887542   2456888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       147 ~is  149 (256)
T 3ezl_A          147 NIS  149 (256)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            876

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.68  E-value=2.8e-16  Score=111.63  Aligned_cols=118  Identities=20%  Similarity=0.238  Sum_probs=87.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..      .+.++..            ....++.++.+|++
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~   65 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGA---KVVIVDRDKA------GAERVAG------------EIGDAALAVAADIS   65 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH------------HHCTTEEEEECCTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHH------HHHHHHH------------HhCCceEEEEecCC
Confidence            6789999999999999999999999986   6888888532      2222111            01257889999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhcC-------CC
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKMK-------KL  145 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~  145 (152)
                      +++      ++.++++       ++|++|||||...        ..+.++..+++|+.++.++++++.+.-       ..
T Consensus        66 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~  139 (261)
T 3n74_A           66 KEA------DVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQE  139 (261)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCC
Confidence            854      4544443       7899999999754        246678899999999999998876431       13


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      .++|++|
T Consensus       140 ~~iv~is  146 (261)
T 3n74_A          140 CVILNVA  146 (261)
T ss_dssp             EEEEEEC
T ss_pred             eEEEEeC
Confidence            4578765

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.68  E-value=3.9e-16  Score=109.72  Aligned_cols=122  Identities=17%  Similarity=0.174  Sum_probs=87.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCC----cEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDI----GKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++||||+|+||++++++|++.|+..    ..|++++|+..  ...+...++.             ....++.++.+|
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~--~~~~~~~~~~-------------~~~~~~~~~~~D   66 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA--DLEKISLECR-------------AEGALTDTITAD   66 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH--HHHHHHHHHH-------------TTTCEEEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHH--HHHHHHHHHH-------------ccCCeeeEEEec
Confidence            6799999999999999999999998610    06778887532  1111111111             113578899999


Q ss_pred             cCCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++++      ++.++++       ++|++||+||...       ..+.+...+++|+.++.++++++.+.   .+.++|
T Consensus        67 ~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i  140 (244)
T 2bd0_A           67 ISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHI  140 (244)
T ss_dssp             TTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCCHH------HHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEE
Confidence            99854      4555443       7999999999653       24667889999999999999988542   245788


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       141 v~is  144 (244)
T 2bd0_A          141 FFIT  144 (244)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            8876

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.68  E-value=6.5e-16  Score=109.11  Aligned_cols=111  Identities=25%  Similarity=0.277  Sum_probs=85.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+....                          ..+..+.+|+
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~--------------------------~~~~~~~~D~   62 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGH---KVAVTHRGSGAP--------------------------KGLFGVEVDV   62 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSSCCC--------------------------TTSEEEECCT
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHH--------------------------HHhcCeeccC
Confidence            36789999999999999999999999986   778888865421                          1122378999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.+++|
T Consensus        63 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv  136 (247)
T 1uzm_A           63 TDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI  136 (247)
T ss_dssp             TCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEE
Confidence            8854      444444       36899999999753       24678889999999999999988642   2457898


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       137 ~is  139 (247)
T 1uzm_A          137 FIG  139 (247)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            876

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.68  E-value=6.9e-16  Score=110.67  Aligned_cols=123  Identities=20%  Similarity=0.173  Sum_probs=85.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+....+...           .....+.++.+|+
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~Dl   92 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGL---KVVGCARTVG--NIEELAAECKSA-----------GYPGTLIPYRCDL   92 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHHT-----------TCSSEEEEEECCT
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEECChH--HHHHHHHHHHhc-----------CCCceEEEEEecC
Confidence            37889999999999999999999999986   6788888532  111111111110           0124678899999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHH----HhcCCC--c
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIA----LKMKKL--V  146 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~--~  146 (152)
                      ++++      ++.++++       ++|++||+||...       ..+.+...+++|+.++..+.+.+    .+. +.  +
T Consensus        93 ~~~~------~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~g  165 (279)
T 1xg5_A           93 SNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDG  165 (279)
T ss_dssp             TCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSC
T ss_pred             CCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCc
Confidence            9854      4554443       7899999999653       24567889999999966655544    443 33  6


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      +||++|
T Consensus       166 ~iv~is  171 (279)
T 1xg5_A          166 HIININ  171 (279)
T ss_dssp             EEEEEC
T ss_pred             eEEEEc
Confidence            888876

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.68  E-value=5.1e-16  Score=112.53  Aligned_cols=123  Identities=13%  Similarity=0.185  Sum_probs=88.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  .+.+...++...          .....++.++.+|++
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~--~~~~~~~~l~~~----------~~~~~~~~~~~~Dv~   88 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGA---QVTITGRNED--RLEETKQQILKA----------GVPAEKINAVVADVT   88 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHHT----------TCCGGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHhc----------CCCCceEEEEecCCC
Confidence            6789999999999999999999999986   6788888532  111111121110          000016889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++      ++.+++       .++|++|||||...         ..+.++..+++|+.+++++++++.+.   .+ ++|
T Consensus        89 d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~I  161 (297)
T 1xhl_A           89 EAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEI  161 (297)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEE
Confidence            854      455444       37899999999642         14567889999999999999998653   23 688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       162 V~is  165 (297)
T 1xhl_A          162 VNVS  165 (297)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            8876

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.68  E-value=4.5e-16  Score=109.69  Aligned_cols=120  Identities=18%  Similarity=0.174  Sum_probs=86.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++..            ....++.++.+|++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~D~~~~   64 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD---RVAALDLSAE--TLEETARTHWH------------AYADKVLRVRADVADE   64 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHST------------TTGGGEEEEECCTTCH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH------------hcCCcEEEEEecCCCH
Confidence            57999999999999999999999986   6788888532  11111111100            0124688999999985


Q ss_pred             CCCCChhHHHHHhc-------cccEEEeccccccc----------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         90 NLGIKDSDLLMLQE-------EVSVVFNGAASLKL----------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        90 ~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +      ++.++++       ++|++||+||....          .+.+...+++|+.++.++++++.+.   .+.+++|
T Consensus        65 ~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv  138 (250)
T 2cfc_A           65 G------DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIV  138 (250)
T ss_dssp             H------HHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence            4      4555544       78999999986431          3567779999999999888877542   2457888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       139 ~is  141 (250)
T 2cfc_A          139 NIA  141 (250)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            876

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.68  E-value=4.5e-16  Score=114.41  Aligned_cols=115  Identities=22%  Similarity=0.286  Sum_probs=85.2

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++|+||||+|+||++++++|++.|+   .|++++|.....  .+.+..+.              ...++.++.+|
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~--~~~~~~~~--------------~~~~~~~~~~D   83 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH---EVTVVDNFFTGR--KRNVEHWI--------------GHENFELINHD   83 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCC--GGGTGGGT--------------TCTTEEEEECC
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCC---EEEEEeCCCccc--hhhhhhhc--------------cCCceEEEeCc
Confidence            346789999999999999999999999986   778888864321  11111110              12568899999


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.++.           +.++|+|||+||....   ..++...+++|+.++.++++++.+. +. +||++|
T Consensus        84 ~~~~~-----------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~S  140 (343)
T 2b69_A           84 VVEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLAS  140 (343)
T ss_dssp             TTSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEE
T ss_pred             cCChh-----------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEC
Confidence            98764           2579999999997653   3456778999999999999999987 45 888876

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.68  E-value=9.3e-17  Score=113.26  Aligned_cols=106  Identities=18%  Similarity=0.107  Sum_probs=82.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |++++||||+|+||++++++|+++|+   .|++++|+....  .                       .   .+.+|++++
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~---~V~~~~r~~~~~--~-----------------------~---~~~~D~~~~   49 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGH---TVIGIDRGQADI--E-----------------------A---DLSTPGGRE   49 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSSE--E-----------------------C---CTTSHHHHH
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCChhHc--c-----------------------c---cccCCcccH
Confidence            36899999999999999999999986   788888865411  0                       0   145788774


Q ss_pred             CCCCChhHHHHHhc----cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE----EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +      ++.++++    ++|+|||+||......++...+++|+.++.++++++.+.   .+.+++|++|
T Consensus        50 ~------~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~s  113 (255)
T 2dkn_A           50 T------AVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVG  113 (255)
T ss_dssp             H------HHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEEC
T ss_pred             H------HHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEe
Confidence            3      5666654    899999999976545678889999999999999988653   2457898876

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.68  E-value=3.3e-16  Score=112.74  Aligned_cols=121  Identities=16%  Similarity=0.195  Sum_probs=88.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||+++++.|++.|+   +|++++|+..  ...+..+.+..             ...++.++.+|++
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~--~~~~~~~~l~~-------------~~~~~~~~~~Dl~  103 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVS---HVICISRTQK--SCDSVVDEIKS-------------FGYESSGYAGDVS  103 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSS---EEEEEESSHH--HHHHHHHHHHT-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCC---EEEEEcCCHH--HHHHHHHHHHh-------------cCCceeEEECCCC
Confidence            5678999999999999999999999986   6777776432  11111112111             1356889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++||+||...       ..+.+...+++|+.++.++++++.+.   .+.++||+
T Consensus       104 d~~------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~  177 (285)
T 2c07_A          104 KKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIIN  177 (285)
T ss_dssp             CHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            854      455544       47899999999753       24567889999999999998887641   24578988


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       178 is  179 (285)
T 2c07_A          178 IS  179 (285)
T ss_dssp             EC
T ss_pred             EC
Confidence            76

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.68  E-value=3.4e-16  Score=108.55  Aligned_cols=104  Identities=13%  Similarity=0.097  Sum_probs=82.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|++.|+   .|++++|+..      .+..+.               ..++.++.+|+++++
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~------~~~~~~---------------~~~~~~~~~D~~d~~   56 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGH---EVLAVVRDPQ------KAADRL---------------GATVATLVKEPLVLT   56 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHT---------------CTTSEEEECCGGGCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCC---EEEEEEeccc------cccccc---------------CCCceEEeccccccc
Confidence            4799999999999999999999986   7888888532      222221               257889999999976


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            +  ..++++|+|||+||......    ....|+.++.++++++.+. + ++||++|
T Consensus        57 ------~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~S  104 (224)
T 3h2s_A           57 ------E--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFIL  104 (224)
T ss_dssp             ------H--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEEC
T ss_pred             ------H--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEe
Confidence                  3  67789999999999863222    2467999999999999987 5 8999886

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.68  E-value=4e-16  Score=112.94  Aligned_cols=123  Identities=21%  Similarity=0.164  Sum_probs=88.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++..         .   ...++.++.+|+
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~---~V~~~~r~~~--~~~~~~~~l~~---------~---~~~~~~~~~~Dl   85 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA---QCVIASRKMD--VLKATAEQISS---------Q---TGNKVHAIQCDV   85 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH---------H---HSSCEEEEECCT
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH---------h---cCCceEEEEeCC
Confidence            46789999999999999999999999986   6788888532  11111111110         0   025688999999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc----CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM----KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~  148 (152)
                      ++++      ++.++++       ++|++||+||...       ..+.+...+++|+.++.++++++.+.    .+.++|
T Consensus        86 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~i  159 (302)
T 1w6u_A           86 RDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAF  159 (302)
T ss_dssp             TCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEE
Confidence            9854      4554443       5699999999643       24567889999999999998887642    234688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       160 v~is  163 (302)
T 1w6u_A          160 LSIT  163 (302)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            8876

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.68  E-value=4.3e-16  Score=109.53  Aligned_cols=117  Identities=20%  Similarity=0.233  Sum_probs=87.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..      .++++..         +    .....++.+|++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~~---------~----~~~~~~~~~D~~   62 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGA---RVVAVSRTQA------DLDSLVR---------E----CPGIEPVCVDLG   62 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH---------H----STTCEEEECCTT
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH---------H----cCCCCEEEEeCC
Confidence            6789999999999999999999999986   6788887532      2222111         0    124566789999


Q ss_pred             CCCCCCChhHHHHHhc---cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-CcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE---EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-LVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~S  152 (152)
                      +++      ++.++++   ++|++||+||....       .+.++..+++|+.++.++++++.+.   .+ .+++|++|
T Consensus        63 ~~~------~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~s  135 (244)
T 3d3w_A           63 DWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS  135 (244)
T ss_dssp             CHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CHH------HHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeC
Confidence            854      6777665   68999999996532       4567789999999999999888653   13 57888876

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.68  E-value=9.4e-16  Score=110.77  Aligned_cols=128  Identities=16%  Similarity=0.115  Sum_probs=87.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee-cCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC-RAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++ |+..  .+.+...++.         .   ....++.++.+|+
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~~r~~~--~~~~~~~~l~---------~---~~~~~~~~~~~Dl   69 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSAA--EANALSATLN---------A---RRPNSAITVQADL   69 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHHH---------H---HSTTCEEEEECCC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEcCCCHH--HHHHHHHHHh---------h---hcCCeeEEEEeec
Confidence            6789999999999999999999999986   678888 7532  1111111111         0   0125788999999


Q ss_pred             CCCCCC----------C-ChhHHHHHh-------ccccEEEeccccccc---------------------hhhHHHHHHh
Q psy11862         87 LQANLG----------I-KDSDLLMLQ-------EEVSVVFNGAASLKL---------------------EAELKENVAA  127 (152)
Q Consensus        87 ~~~~~~----------~-~~~~~~~~~-------~~~d~vi~~a~~~~~---------------------~~~~~~~~~~  127 (152)
                      ++++.-          . ...++.+++       .++|++|||||....                     .+.+..++++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (291)
T 1e7w_A           70 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGS  149 (291)
T ss_dssp             SSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHH
T ss_pred             CCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHH
Confidence            986500          0 000233333       478999999996531                     4567779999


Q ss_pred             hhHHHHHHHHHHHhc---CC------CcceEecC
Q psy11862        128 NTRGTQRLLDIALKM---KK------LVVSLDIG  152 (152)
Q Consensus       128 n~~~~~~l~~~~~~~---~~------~~~~v~~S  152 (152)
                      |+.+++.+++++.+.   .+      .++||++|
T Consensus       150 N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~is  183 (291)
T 1e7w_A          150 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV  183 (291)
T ss_dssp             HTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEEC
T ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEe
Confidence            999999999988642   23      46888876

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.67  E-value=4.1e-16  Score=112.02  Aligned_cols=123  Identities=11%  Similarity=0.136  Sum_probs=87.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  .+.+...++...          .....++.++.+|++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~~----------~~~~~~~~~~~~Dv~   68 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGA---NVTITGRSSE--RLEETRQIILKS----------GVSEKQVNSVVADVT   68 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHTT----------TCCGGGEEEEECCTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHHc----------CCCCcceEEEEecCC
Confidence            6789999999999999999999999986   6788888532  111111221110          000126889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-----------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCc
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-----------EAELKENVAANTRGTQRLLDIALKM---KKLV  146 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~  146 (152)
                      +++      ++.+++       .++|++|||||....           .+.++..+++|+.++.++++++.+.   .+ +
T Consensus        69 ~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g  141 (280)
T 1xkq_A           69 TED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-G  141 (280)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-C
Confidence            854      454444       378999999996431           3567889999999999999998752   13 6


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       142 ~iv~is  147 (280)
T 1xkq_A          142 EIVNVS  147 (280)
T ss_dssp             EEEEEC
T ss_pred             cEEEec
Confidence            888876

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.67  E-value=9e-16  Score=108.27  Aligned_cols=116  Identities=16%  Similarity=0.209  Sum_probs=87.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..      .+.++.              ...++.++.+|++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~D~~   60 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGA---KVIATDINES------KLQELE--------------KYPGIQTRVLDVT   60 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHGGGG--------------GSTTEEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHH--------------hccCceEEEeeCC
Confidence            6789999999999999999999999986   6788887531      222111              0136788999999


Q ss_pred             CCCCCCChhHHHHH---hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIKDSDLLML---QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~---~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +++      ++.+.   +.++|++|||||....       .+.++..+++|+.++.++++++.+.   .+.+++|++|
T Consensus        61 ~~~------~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~is  132 (246)
T 2ag5_A           61 KKK------QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMS  132 (246)
T ss_dssp             CHH------HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             CHH------HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEe
Confidence            854      44444   4579999999997542       4667889999999999999988642   2457888876

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.67  E-value=4.3e-16  Score=112.84  Aligned_cols=126  Identities=19%  Similarity=0.238  Sum_probs=89.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhc-cccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC-PAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D   85 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+..  ...+...++.         ... .....++.++.+|
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~---------~~~~~~~~~~~~~~~~D   80 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGS---NVVIASRKLE--RLKSAADELQ---------ANLPPTKQARVIPIQCN   80 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHH---------HTSCTTCCCCEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHH---------hhccccCCccEEEEecC
Confidence            47789999999999999999999999986   6788888532  1111111111         100 0113578899999


Q ss_pred             cCCCCCCCChhHHHHHhc-------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++++      ++.++++       ++|++|||||...       ..+.+...+++|+.++.++++++.+.   .+.+++
T Consensus        81 ~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~i  154 (303)
T 1yxm_A           81 IRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSI  154 (303)
T ss_dssp             TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeE
Confidence            99854      4555543       5899999999542       24567778999999999999998652   124678


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       155 v~is  158 (303)
T 1yxm_A          155 VNII  158 (303)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            8775

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.67  E-value=8.6e-17  Score=116.87  Aligned_cols=103  Identities=18%  Similarity=0.219  Sum_probs=60.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +|+++||||+|+||++++++|++.|+   .|++++|+...                           .+  ++.+|++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~---------------------------~~--~~~~Dl~d~   49 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW---HAVGCGFRRAR---------------------------PK--FEQVNLLDS   49 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEC---------------------------------------------
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC---eEEEEccCCCC---------------------------CC--eEEecCCCH
Confidence            57899999999999999999999986   77888875331                           11  567899886


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++  ++|+|||+||....   ..++...+++|+.++.++++++.+. +. +||++|
T Consensus        50 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~S  109 (315)
T 2ydy_A           50 N------AVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYIS  109 (315)
T ss_dssp             --------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEE
T ss_pred             H------HHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEc
Confidence            5      4666666  48999999997653   3566778999999999999999987 45 899876

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.67  E-value=6.2e-16  Score=110.46  Aligned_cols=122  Identities=15%  Similarity=0.145  Sum_probs=87.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+++.. ....+....+.             ....++.++.+|++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~~Dl~   85 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM---AVAVSHSERN-DHVSTWLMHER-------------DAGRDFKAYAVDVA   85 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEECSCH-HHHHHHHHHHH-------------TTTCCCEEEECCTT
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCch-HHHHHHHHHHH-------------hcCCceEEEEecCC
Confidence            5788999999999999999999999986   6677775332 11111111111             11367889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.+++|+
T Consensus        86 ~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  159 (269)
T 3gk3_A           86 DFE------SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVN  159 (269)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            854      444444       37899999999753       25677889999999999999988642   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       160 is  161 (269)
T 3gk3_A          160 IG  161 (269)
T ss_dssp             EC
T ss_pred             eC
Confidence            76

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.67  E-value=3.3e-16  Score=112.74  Aligned_cols=120  Identities=13%  Similarity=0.156  Sum_probs=88.4

Q ss_pred             cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+  |+||+++++.|++.|+   +|++++|+..   ..+.+.++...             ...+.++.+|
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~D   79 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGA---QLAFTYATPK---LEKRVREIAKG-------------FGSDLVVKCD   79 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTC---EEEEEESSGG---GHHHHHHHHHH-------------TTCCCEEECC
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCCHH---HHHHHHHHHHh-------------cCCeEEEEcC
Confidence            678999999999  9999999999999986   6788888642   23333332210             1236788999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhcC--CC
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKMK--KL  145 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~  145 (152)
                      +++++      ++.+++       .++|++|||||...           ..+.+...+++|+.++.++++++.+.-  ..
T Consensus        80 l~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  153 (285)
T 2p91_A           80 VSLDE------DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRN  153 (285)
T ss_dssp             TTCHH------HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSC
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            99854      454444       37899999999653           145677899999999999999997641  23


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      ++||++|
T Consensus       154 g~iv~is  160 (285)
T 2p91_A          154 GAIVTLS  160 (285)
T ss_dssp             CEEEEEE
T ss_pred             CEEEEEc
Confidence            6888875

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.67  E-value=7.5e-16  Score=108.94  Aligned_cols=115  Identities=21%  Similarity=0.271  Sum_probs=85.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|++.|+   +|++.+|+..      .+.++..     .+       ..++.++.+|+++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~~~~~-----~~-------~~~~~~~~~Dv~~~~   59 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH---KVIATGRRQE------RLQELKD-----EL-------GDNLYIAQLDVRNRA   59 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH-----HH-------CTTEEEEECCTTCHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH-----Hh-------cCceEEEEcCCCCHH
Confidence            5799999999999999999999986   6788887532      2222111     00       146888999999854


Q ss_pred             CCCChhHHHHHhc-------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE-------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                            ++.++++       ++|++|||||...        ..+.++..+++|+.+++++++++.+.   .+.+++|++|
T Consensus        60 ------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~is  133 (248)
T 3asu_A           60 ------AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIG  133 (248)
T ss_dssp             ------HHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             ------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence                  5666654       6899999999652        14667889999999999999988641   2457888876

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.67  E-value=6.6e-16  Score=110.44  Aligned_cols=121  Identities=17%  Similarity=0.171  Sum_probs=85.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .++++++||||+|+||++++++|++.|+   +|++. .|+..  ...+....+.             ....++.++.+|+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~---~V~~~~~~~~~--~~~~~~~~~~-------------~~~~~~~~~~~Dl   85 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW---RVGVNYAANRE--AADAVVAAIT-------------ESGGEAVAIPGDV   85 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHHH-------------HTTCEEEEEECCT
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCChh--HHHHHHHHHH-------------hcCCcEEEEEcCC
Confidence            3578999999999999999999999997   55554 44321  1111111111             1136788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc------CCC
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM------KKL  145 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~  145 (152)
                      ++++      ++.+++       .++|++|||||...        ..+.+...+++|+.++.++++++.+.      .+.
T Consensus        86 ~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~  159 (272)
T 4e3z_A           86 GNAA------DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQG  159 (272)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC
T ss_pred             CCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCC
Confidence            9854      454444       37899999999754        24667789999999999999988653      124


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      ++||++|
T Consensus       160 g~iv~is  166 (272)
T 4e3z_A          160 GAIVNVS  166 (272)
T ss_dssp             EEEEEEC
T ss_pred             CEEEEEc
Confidence            5788876

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.67  E-value=6.7e-16  Score=111.71  Aligned_cols=122  Identities=11%  Similarity=0.071  Sum_probs=89.6

Q ss_pred             cccCCceEEEcCCcch--hHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          6 RWYAGRSVLVTGGTGF--MGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~--iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      ..+++++++||||+|+  ||++++++|++.|+   +|++.+|+..   ..+.+.++...             ..++.++.
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~---~V~~~~r~~~---~~~~~~~~~~~-------------~~~~~~~~   87 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGA---ELAFTYQGDA---LKKRVEPLAEE-------------LGAFVAGH   87 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTC---EEEEEECSHH---HHHHHHHHHHH-------------HTCEEEEE
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC---EEEEEcCCHH---HHHHHHHHHHh-------------cCCceEEE
Confidence            3478899999999966  99999999999996   6777887521   22233322111             14578899


Q ss_pred             cccCCCCCCCChhHHHHHh-------ccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CC
Q psy11862         84 GDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KK  144 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~  144 (152)
                      +|+++++      ++.+++       .++|++|||||...           ..+.+...+++|+.+++++++++.+. ..
T Consensus        88 ~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~  161 (293)
T 3grk_A           88 CDVADAA------SIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD  161 (293)
T ss_dssp             CCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT
T ss_pred             CCCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            9999964      454444       37899999999753           15677889999999999999998763 23


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      ..++|++|
T Consensus       162 ~g~Iv~is  169 (293)
T 3grk_A          162 GGSILTLT  169 (293)
T ss_dssp             CEEEEEEE
T ss_pred             CCEEEEEe
Confidence            45788765

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.67  E-value=4e-16  Score=111.22  Aligned_cols=121  Identities=12%  Similarity=0.142  Sum_probs=88.3

Q ss_pred             ccCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++++++||||+  |+||++++++|++.|+   +|++++|+..   ..+.+.++...             .....++.+
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~   66 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQNDK---LKGRVEEFAAQ-------------LGSDIVLQC   66 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSTT---THHHHHHHHHH-------------TTCCCEEEC
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEcCcHH---HHHHHHHHHHh-------------cCCcEEEEc
Confidence            3678999999999  9999999999999986   6788888652   23333332210             122367889


Q ss_pred             ccCCCCCCCChhHHHHHhc-------cccEEEecccccc------------chhhHHHHHHhhhHHHHHHHHHHHhcC-C
Q psy11862         85 DILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK------------LEAELKENVAANTRGTQRLLDIALKMK-K  144 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~  144 (152)
                      |+++++      ++.++++       ++|++|||||...            ..+.+...+++|+.++.++++++.+.- .
T Consensus        67 D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  140 (265)
T 1qsg_A           67 DVAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP  140 (265)
T ss_dssp             CTTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             cCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence            999854      4555543       6899999999643            134677799999999999999997641 1


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      .++||++|
T Consensus       141 ~g~iv~is  148 (265)
T 1qsg_A          141 GSALLTLS  148 (265)
T ss_dssp             EEEEEEEE
T ss_pred             CCEEEEEc
Confidence            25788765

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.67  E-value=6.8e-16  Score=107.93  Aligned_cols=115  Identities=21%  Similarity=0.224  Sum_probs=84.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|++.|+   .|++++|+..      .+..+..         .    ..++.++.+|++++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~~---------~----~~~~~~~~~D~~~~   62 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY---RVGLMARDEK------RLQALAA---------E----LEGALPLPGDVREE   62 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH---------H----STTCEEEECCTTCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH---------H----hhhceEEEecCCCH
Confidence            57899999999999999999999986   6788887532      2222111         0    12577889999985


Q ss_pred             CCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---cCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---MKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~S  152 (152)
                      +      ++.+++       .++|++||+||...       ..+++...+++|+.++.++++.+.+   ..+.++||++|
T Consensus        63 ~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~is  136 (234)
T 2ehd_A           63 G------DWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVG  136 (234)
T ss_dssp             H------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             H------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEC
Confidence            4      444443       37899999999643       2456788999999999988777643   12467899886

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.67  E-value=7.4e-16  Score=109.87  Aligned_cols=118  Identities=17%  Similarity=0.137  Sum_probs=88.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..      .+.+....            ...++.++.+|++
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~   62 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGA---SLVAVDREER------LLAEAVAA------------LEAEAIAVVADVS   62 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHHT------------CCSSEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHHH------------hcCceEEEEcCCC
Confidence            6789999999999999999999999986   7788888532      22222110            1146888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMK-KLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  152 (152)
                      +++      ++.+++       .++|++|||||....       .+.++..+++|+.++.++++++.+.- ..+++|++|
T Consensus        63 ~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  136 (263)
T 2a4k_A           63 DPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTG  136 (263)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred             CHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence            854      454444       367999999997542       45677899999999999999987641 135888876

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.67  E-value=2.3e-16  Score=113.45  Aligned_cols=104  Identities=13%  Similarity=0.152  Sum_probs=83.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |+|+||||+|++|+++++.|.+. |+   .|++++|++....      .+               ...++.++.+|++|+
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~---~V~~~~R~~~~~~------~~---------------~~~~v~~~~~D~~d~   56 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHID---HFHIGVRNVEKVP------DD---------------WRGKVSVRQLDYFNQ   56 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCT---TEEEEESSGGGSC------GG---------------GBTTBEEEECCTTCH
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCC---cEEEEECCHHHHH------Hh---------------hhCCCEEEEcCCCCH
Confidence            47999999999999999999887 76   6788888654211      00               125788999999985


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++++|+|||+++.....       ..|+.++.++++++.+. ++++||++|
T Consensus        57 ~------~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~S  105 (289)
T 3e48_A           57 E------SMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIG  105 (289)
T ss_dssp             H------HHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             H------HHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEc
Confidence            4      7999999999999999875422       33788899999999997 688999986

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.67  E-value=2.9e-16  Score=112.61  Aligned_cols=104  Identities=19%  Similarity=0.213  Sum_probs=82.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh--CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS--CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      |+++||||+|++|++++++|++.  |+   .|++++|+....  . .+.                  ..++.++.+|++|
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~--~-~l~------------------~~~~~~~~~D~~d   56 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS---QIIAIVRNVEKA--S-TLA------------------DQGVEVRHGDYNQ   56 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG---GEEEEESCTTTT--H-HHH------------------HTTCEEEECCTTC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC---eEEEEEcCHHHH--h-HHh------------------hcCCeEEEeccCC
Confidence            47999999999999999999998  76   678888865421  1 111                  1357788999998


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.++++++|+|||+|+.. ..   .   ++|+.++.++++++.+. ++++||++|
T Consensus        57 ~~------~l~~~~~~~d~vi~~a~~~-~~---~---~~n~~~~~~l~~a~~~~-~~~~~v~~S  106 (287)
T 2jl1_A           57 PE------SLQKAFAGVSKLLFISGPH-YD---N---TLLIVQHANVVKAARDA-GVKHIAYTG  106 (287)
T ss_dssp             HH------HHHHHTTTCSEEEECCCCC-SC---H---HHHHHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred             HH------HHHHHHhcCCEEEEcCCCC-cC---c---hHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence            54      7889999999999999863 11   1   57899999999999987 688999986

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.67  E-value=6.7e-16  Score=109.39  Aligned_cols=117  Identities=18%  Similarity=0.183  Sum_probs=86.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++++|+..      .+.++..     .+       ..++.++.+|++
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~------~~~~~~~-----~~-------~~~~~~~~~D~~   62 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGA---KVAFSDINEA------AGQQLAA-----EL-------GERSMFVRHDVS   62 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECSCHH------HHHHHHH-----HH-------CTTEEEECCCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH-----Hc-------CCceEEEEccCC
Confidence            6789999999999999999999999986   6788887532      2222111     00       246888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++|||||....       .+.++..+++|+.+++.+.+++.+.   .+ +++|+
T Consensus        63 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~  135 (253)
T 1hxh_A           63 SEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIIN  135 (253)
T ss_dssp             CHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEE
Confidence            854      454444       367999999997532       4667889999999999888877542   24 78888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       136 is  137 (253)
T 1hxh_A          136 MA  137 (253)
T ss_dssp             EC
T ss_pred             Ec
Confidence            76

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.66  E-value=1.1e-16  Score=110.29  Aligned_cols=109  Identities=20%  Similarity=0.145  Sum_probs=87.3

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+|+++||||+|++|++++++|+++|+. .+|++++|++...                         ..++.++.+|+++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~-~~V~~~~r~~~~~-------------------------~~~~~~~~~D~~~   57 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALAE-------------------------HPRLDNPVGPLAE   57 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCCC-------------------------CTTEECCBSCHHH
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCC-CeEEEEeCCCccc-------------------------CCCceEEeccccC
Confidence            3579999999999999999999999741 2788888875420                         2467788899987


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.+.+  +|+|||++|.... ..++...+++|+.++.++++++.+. +.++||++|
T Consensus        58 ~~------~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S  113 (215)
T 2a35_A           58 LL------PQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVS  113 (215)
T ss_dssp             HG------GGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             HH------HHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEEC
Confidence            54      355555  9999999997642 4567789999999999999999987 678999987

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.66  E-value=3.8e-16  Score=115.38  Aligned_cols=107  Identities=24%  Similarity=0.231  Sum_probs=87.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhC-----CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSC-----PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g-----~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      +|+++||||+|+||++++++|++.|     +   .|++++|+.....                      ....++.++.+
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~---~V~~~~r~~~~~~----------------------~~~~~~~~~~~   55 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPW---KVYGVARRTRPAW----------------------HEDNPINYVQC   55 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSE---EEEEEESSCCCSC----------------------CCSSCCEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCce---EEEEEeCCCCccc----------------------cccCceEEEEe
Confidence            4789999999999999999999987     5   7889998765321                      00246888999


Q ss_pred             ccCCCCCCCChhHHHHHhcc---ccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceE
Q psy11862         85 DILQANLGIKDSDLLMLQEE---VSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMK-KLVVSL  149 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~~---~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v  149 (152)
                      |+++++      ++.+++++   +|+|||+||...  .++...+++|+.++.++++++.+.. ++++||
T Consensus        56 Dl~d~~------~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v  116 (364)
T 2v6g_A           56 DISDPD------DSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHIS  116 (364)
T ss_dssp             CTTSHH------HHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEE
T ss_pred             ecCCHH------HHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEE
Confidence            998854      68888887   999999999764  4567789999999999999998752 577887

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.66  E-value=4.3e-16  Score=109.22  Aligned_cols=111  Identities=14%  Similarity=0.111  Sum_probs=83.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++||||+|+||++++++|+++|+   +|++++|+....                         .....++.+|++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~-------------------------~~~~~~~~~D~~   52 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGY---TVLNIDLSANDQ-------------------------ADSNILVDGNKN   52 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCCTT-------------------------SSEEEECCTTSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEecCcccc-------------------------ccccEEEeCCCC
Confidence            4678999999999999999999999986   788888875421                         023456789998


Q ss_pred             CCCCCCChhHHHHHh---------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceE
Q psy11862         88 QANLGIKDSDLLMLQ---------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKMK-KLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~---------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v  149 (152)
                      +++      ++.+++         .++|++|||||...        ..+.++..+++|+.++.++++++.+.- ..+++|
T Consensus        53 ~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv  126 (236)
T 1ooe_A           53 WTE------QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQ  126 (236)
T ss_dssp             HHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEE
Confidence            854      344433         37999999999642        245677899999999999999987631 125788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       127 ~is  129 (236)
T 1ooe_A          127 LTG  129 (236)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            775

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.66  E-value=8.5e-16  Score=108.94  Aligned_cols=117  Identities=23%  Similarity=0.252  Sum_probs=86.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +|+++||||+|+||++++++|++.|.++ .|++.+|+..      .+.++...            ...++.++.+|++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv~~~   62 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEA------PLKKLKEK------------YGDRFFYVVGDITED   62 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHH------HHHHHHHH------------HGGGEEEEESCTTSH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHH------HHHHHHHH------------hCCceEEEECCCCCH
Confidence            5899999999999999999999997544 6777777532      22222110            025788999999996


Q ss_pred             CCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         90 NLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +      ++.+++       .++|++|||||...        ..+.++..+++|+.++.++++++.+.   .+ +++|++
T Consensus        63 ~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~i  135 (254)
T 3kzv_A           63 S------VLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFV  135 (254)
T ss_dssp             H------HHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred             H------HHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEE
Confidence            4      454444       37899999999743        24677889999999999999998431   13 688887


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       136 s  136 (254)
T 3kzv_A          136 S  136 (254)
T ss_dssp             C
T ss_pred             c
Confidence            6

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.66  E-value=6.9e-16  Score=122.53  Aligned_cols=115  Identities=22%  Similarity=0.247  Sum_probs=90.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|++. |+   .|++++|+....  .    .+.              ...++.++.+|+
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~---~V~~~~r~~~~~--~----~~~--------------~~~~v~~v~~Dl  369 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHY---EVYGLDIGSDAI--S----RFL--------------NHPHFHFVEGDI  369 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSE---EEEEEESCCTTT--G----GGT--------------TCTTEEEEECCT
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCC---EEEEEEcCchhh--h----hhc--------------cCCceEEEECCC
Confidence            56789999999999999999999998 65   788899875421  0    000              025788999999


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++++     +.+..+++++|+|||+||....   ..++...+++|+.++.++++++.+. + ++||++|
T Consensus       370 ~d~~-----~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~S  431 (660)
T 1z7e_A          370 SIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPS  431 (660)
T ss_dssp             TTCH-----HHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEEC
T ss_pred             CCcH-----HHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEe
Confidence            8853     1366677899999999997653   3566778999999999999999987 5 8999987

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.66  E-value=7.6e-16  Score=109.81  Aligned_cols=122  Identities=16%  Similarity=0.174  Sum_probs=86.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++|+..  ...+....+...           ....++.++.+|++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~l~~~-----------~~~~~~~~~~~D~~   68 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGA---KVALVDWNLE--AGVQCKAALHEQ-----------FEPQKTLFIQCDVA   68 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHTTT-----------SCGGGEEEEECCTT
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHhh-----------cCCCceEEEecCCC
Confidence            5689999999999999999999999986   6788888532  111111121110           00246888999999


Q ss_pred             CCCCCCChhHHHHHhc-------cccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhc----C--CCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE-------EVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKM----K--KLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~~~v~~S  152 (152)
                      +++      ++.++++       ++|++|||||... .++++..+++|+.++..+.+.+.+.    +  ..+++|++|
T Consensus        69 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~is  139 (267)
T 2gdz_A           69 DQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS  139 (267)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeC
Confidence            854      4554443       5799999999764 5678889999999888877766532    1  146888876

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.66  E-value=6.6e-16  Score=111.85  Aligned_cols=120  Identities=10%  Similarity=0.059  Sum_probs=89.0

Q ss_pred             cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+|  +||++++++|++.|+   +|++.+|+..   ..+.+.++...             ...+.++.+|
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~---~V~~~~r~~~---~~~~~~~~~~~-------------~~~~~~~~~D   88 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA---EVALTYLSET---FKKRVDPLAES-------------LGVKLTVPCD   88 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTC---EEEEEESSGG---GHHHHHHHHHH-------------HTCCEEEECC
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC---EEEEEeCChH---HHHHHHHHHHh-------------cCCeEEEEcC
Confidence            6789999999997  999999999999996   6788888642   22333322111             1346788999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~  146 (152)
                      +++++      ++.+++       .++|++|||||...           ..+.+...+++|+.++.++++++.+. ....
T Consensus        89 v~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g  162 (296)
T 3k31_A           89 VSDAE------SVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGG  162 (296)
T ss_dssp             TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            99965      455444       37899999999753           14577889999999999999999764 2235


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       163 ~IV~is  168 (296)
T 3k31_A          163 SILTLS  168 (296)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            788765

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.66  E-value=6.2e-16  Score=108.79  Aligned_cols=112  Identities=16%  Similarity=0.013  Sum_probs=84.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ..++++++||||+|+||++++++|+++|+   +|++++|+....                         .....++.+|+
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~-------------------------~~~~~~~~~D~   55 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNW---WVASIDVVENEE-------------------------ASASVIVKMTD   55 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSCCTT-------------------------SSEEEECCCCS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCChhhc-------------------------cCCcEEEEcCC
Confidence            35678999999999999999999999986   688888875421                         02345678999


Q ss_pred             CCCCCCCChhHHHHHh---------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQ---------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM-KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~---------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~  148 (152)
                      ++++      ++.+++         .++|++|||||...        ..+.++..+++|+.++.++++++.+. ...+++
T Consensus        56 ~~~~------~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~i  129 (241)
T 1dhr_A           56 SFTE------QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLL  129 (241)
T ss_dssp             CHHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEE
Confidence            8854      444443         37899999999642        24567778999999999999998763 112578


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       130 v~is  133 (241)
T 1dhr_A          130 TLAG  133 (241)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            8875

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.66  E-value=1e-15  Score=107.30  Aligned_cols=107  Identities=22%  Similarity=0.213  Sum_probs=83.8

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++||||+|+||++++++|+++|+   +|++++|+..                           ...+.++.+|++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~---------------------------~~~~~~~~~D~~~~   51 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY---RVVVLDLRRE---------------------------GEDLIYVEGDVTRE   51 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSCC---------------------------SSSSEEEECCTTCH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEccCcc---------------------------ccceEEEeCCCCCH
Confidence            57999999999999999999999986   6788888643                           13457889999985


Q ss_pred             CCCCChhHHHHHhc------cccEEEeccccccc-------h----hhHHHHHHhhhHHHHHHHHHHHhcC---C-----
Q psy11862         90 NLGIKDSDLLMLQE------EVSVVFNGAASLKL-------E----AELKENVAANTRGTQRLLDIALKMK---K-----  144 (152)
Q Consensus        90 ~~~~~~~~~~~~~~------~~d~vi~~a~~~~~-------~----~~~~~~~~~n~~~~~~l~~~~~~~~---~-----  144 (152)
                      +      ++.++++      ++|++||+||....       .    +.+...+++|+.++.++++++.+..   +     
T Consensus        52 ~------~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  125 (242)
T 1uay_A           52 E------DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEG  125 (242)
T ss_dssp             H------HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTS
T ss_pred             H------HHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Confidence            4      5666555      78999999997532       1    1778899999999999999987531   1     


Q ss_pred             -CcceEecC
Q psy11862        145 -LVVSLDIG  152 (152)
Q Consensus       145 -~~~~v~~S  152 (152)
                       .++||++|
T Consensus       126 ~~~~iv~~s  134 (242)
T 1uay_A          126 QRGVIVNTA  134 (242)
T ss_dssp             CSEEEEEEC
T ss_pred             CCeEEEEeC
Confidence             13888876

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.66  E-value=1.1e-15  Score=109.52  Aligned_cols=120  Identities=15%  Similarity=0.171  Sum_probs=86.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .|+ ++++||||+|+||++++++|++.|+   +|++++|+..      .+.++..     .+.    . ..++.++.+|+
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~---~V~~~~r~~~------~~~~~~~-----~~~----~-~~~~~~~~~Dv   78 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGW---SLVLTGRREE------RLQALAG-----ELS----A-KTRVLPLTLDV   78 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH-----HHT----T-TSCEEEEECCT
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH-----Hhh----c-CCcEEEEEcCC
Confidence            355 8999999999999999999999996   6788888532      2222110     010    0 14688899999


Q ss_pred             CCCCCCCChhHHHHHhc-------cccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCc-c
Q psy11862         87 LQANLGIKDSDLLMLQE-------EVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM---KKLV-V  147 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~-~  147 (152)
                      ++++      ++.++++       ++|++|||||....        .+.++..+++|+.+++++++++.+.   .+.+ +
T Consensus        79 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~  152 (272)
T 2nwq_A           79 RDRA------AMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGAS  152 (272)
T ss_dssp             TCHH------HHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence            9854      5666654       46999999997431        4677889999999999988887532   1345 8


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       153 IV~is  157 (272)
T 2nwq_A          153 IVNLG  157 (272)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            88876

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.66  E-value=1.1e-15  Score=117.50  Aligned_cols=123  Identities=22%  Similarity=0.280  Sum_probs=93.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ..+++++||||+|+||.++++.|+++|+  .+|++++|+.... ...+...++..             .+.++.++.+|+
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l~~-------------~g~~v~~~~~Dv  288 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAELEA-------------LGARTTVAACDV  288 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHHHH-------------TTCEEEEEECCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCC--CEEEEEcCCCCCcHHHHHHHHHHHh-------------cCCEEEEEEeCC
Confidence            4678999999999999999999999986  4688888875422 22222222222             135788999999


Q ss_pred             CCCCCCCChhHHHHHhcc------ccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEE------VSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~------~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +|++      ++.++++.      +|+|||+||....       .+.+..++++|+.++.++.+++... +.++||++|
T Consensus       289 ~d~~------~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~S  360 (486)
T 2fr1_A          289 TDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFS  360 (486)
T ss_dssp             TCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEE
T ss_pred             CCHH------HHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEc
Confidence            9854      57766654      5999999997542       4567778999999999999999876 678998876

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.66  E-value=9.8e-16  Score=107.60  Aligned_cols=119  Identities=18%  Similarity=0.210  Sum_probs=82.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEE-EEcccC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHI-IEGDIL   87 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~   87 (152)
                      +++++||||+|+||++++++|++.|+   +|+++ +|+..  ...+....+..             ...++.. +.+|++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~---~v~~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~~D~~   62 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF---ALAIHYGQNRE--KAEEVAEEARR-------------RGSPLVAVLGANLL   62 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESSCHH--HHHHHHHHHHH-------------TTCSCEEEEECCTT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHHh-------------cCCceEEEEeccCC
Confidence            47899999999999999999999986   56666 66422  11111111111             1235555 899999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.++       +.++|++||+||...       ..+.+...+++|+.++.++++++.+.   .+.++||+
T Consensus        63 ~~~------~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~  136 (245)
T 2ph3_A           63 EAE------AATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVN  136 (245)
T ss_dssp             SHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            854      44444       347999999999653       24567789999999988877766531   24678998


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       137 ~s  138 (245)
T 2ph3_A          137 IT  138 (245)
T ss_dssp             EC
T ss_pred             Ee
Confidence            76

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.65  E-value=7.4e-16  Score=106.45  Aligned_cols=102  Identities=16%  Similarity=0.178  Sum_probs=81.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+||||+|+||++++++|++.|+   .|++++|++.      .+..+                ..++.++.+|+++++
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~------~~~~~----------------~~~~~~~~~D~~d~~   55 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGH---EVTAIVRNAG------KITQT----------------HKDINILQKDIFDLT   55 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCSH------HHHHH----------------CSSSEEEECCGGGCC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC---EEEEEEcCch------hhhhc----------------cCCCeEEeccccChh
Confidence            4799999999999999999999986   7888998643      11111                146789999999976


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            +  +.+.++|+|||+||....      ....|+.++.++++++.+. +.+++|++|
T Consensus        56 ------~--~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~S  102 (221)
T 3ew7_A           56 ------L--SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVG  102 (221)
T ss_dssp             ------H--HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEEC
T ss_pred             ------h--hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEe
Confidence                  3  667899999999997431      2467899999999999987 678998876

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.65  E-value=8e-16  Score=108.40  Aligned_cols=111  Identities=20%  Similarity=0.148  Sum_probs=85.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHh-hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLR-SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~-~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .++++++||||+|+||++++++|++ .|+   .|++.+|+....                         ...+.++.+|+
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~---~v~~~~~~~~~~-------------------------~~~~~~~~~Dv   53 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNH---TVINIDIQQSFS-------------------------AENLKFIKADL   53 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTE---EEEEEESSCCCC-------------------------CTTEEEEECCT
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCc---EEEEeccccccc-------------------------cccceEEecCc
Confidence            4678999999999999999999999 664   677777754311                         24678899999


Q ss_pred             CCCCCCCChhHHHHHhc-----cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQE-----EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKMK-KLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-----~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  152 (152)
                      ++++      ++.++++     ++|++|||||...       ..+.++..+++|+.++.++++++.+.. .-.++|++|
T Consensus        54 ~~~~------~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~s  126 (244)
T 4e4y_A           54 TKQQ------DITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNG  126 (244)
T ss_dssp             TCHH------HHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEEC
T ss_pred             CCHH------HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEEC
Confidence            9854      5666554     7899999999753       256788899999999999999987641 114787765

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.65  E-value=1.9e-16  Score=116.98  Aligned_cols=112  Identities=23%  Similarity=0.355  Sum_probs=82.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++|+|+||||+|+||++++++|++.| +   .|++++|+.....    ...                 ...+. +.+|+
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~----~~~-----------------~~~~~-~~~d~   98 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGIT---DILVVDNLKDGTK----FVN-----------------LVDLN-IADYM   98 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCC---CEEEEECCSSGGG----GGG-----------------TTTSC-CSEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCc---EEEEEecCCCcch----hhc-----------------ccCce-Eeeec
Confidence            456899999999999999999999998 5   5677887654210    000                 01122 56788


Q ss_pred             CCCCCCCChhHHHHHhc-----cccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQE-----EVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++++      .+..+++     ++|+|||+||.... ..++..++++|+.++.++++++.+. ++ +||++|
T Consensus        99 ~~~~------~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~S  162 (357)
T 2x6t_A           99 DKED------FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYAS  162 (357)
T ss_dssp             EHHH------HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEE
T ss_pred             CcHH------HHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEc
Confidence            7743      5777776     59999999997653 4567789999999999999999987 56 999886

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.65  E-value=1.7e-15  Score=107.94  Aligned_cols=122  Identities=10%  Similarity=0.059  Sum_probs=89.1

Q ss_pred             cCCceEEEcCCcch--hHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTGF--MGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G~--iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+|+  ||++++++|++.|+   +|++.+|+..   ..+.+.++...           ....++.++.+|
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~~~~~~-----------~~~~~~~~~~~D   67 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA---RLIFTYAGER---LEKSVHELAGT-----------LDRNDSIILPCD   67 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTC---EEEEEESSGG---GHHHHHHHHHT-----------SSSCCCEEEECC
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC---EEEEecCchH---HHHHHHHHHHh-----------cCCCCceEEeCC
Confidence            67899999999966  99999999999996   6788887632   23333332211           012378899999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhcC-CCc
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKMK-KLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~  146 (152)
                      +++++      ++.+++       .++|++||+||...           ..+.+...+++|+.++.++++++.+.- ...
T Consensus        68 ~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g  141 (266)
T 3oig_A           68 VTNDA------EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGG  141 (266)
T ss_dssp             CSSSH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCE
T ss_pred             CCCHH------HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCc
Confidence            99965      444444       37899999999753           145677789999999999999998642 235


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       142 ~iv~is  147 (266)
T 3oig_A          142 SIVTLT  147 (266)
T ss_dssp             EEEEEE
T ss_pred             eEEEEe
Confidence            788765

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.65  E-value=1.4e-15  Score=117.63  Aligned_cols=124  Identities=19%  Similarity=0.219  Sum_probs=94.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ..+++++||||+|+||.++++.|++.|+  ..|++++|+... ....+...++..             ...++.++.+|+
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l~~-------------~g~~v~~~~~Dv  321 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGA--ERLVLTSRRGPEAPGAAELAEELRG-------------HGCEVVHAACDV  321 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHHHT-------------TTCEEEEEECCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCC--cEEEEEecCCcccHHHHHHHHHHHh-------------cCCEEEEEEeCC
Confidence            4678999999999999999999999886  468888887532 223333333322             135788999999


Q ss_pred             CCCCCCCChhHHHHHhcc--ccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEE--VSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~--~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +|++      ++.++++.  +|+|||+||....       .+.+..++++|+.++.++.+++....+.++||++|
T Consensus       322 td~~------~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~S  390 (511)
T 2z5l_A          322 AERD------ALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFS  390 (511)
T ss_dssp             SCHH------HHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEE
T ss_pred             CCHH------HHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEe
Confidence            9954      67777764  9999999997542       45677789999999999999887643567888876

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.65  E-value=2.3e-15  Score=108.46  Aligned_cols=128  Identities=15%  Similarity=0.176  Sum_probs=86.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++++|+.. ....+....+.         .   ....++.++.+|+
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~-~~~~~~~~~l~---------~---~~~~~~~~~~~Dv   83 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGY---RVVIHYHNSA-EAAVSLADELN---------K---ERSNTAVVCQADL   83 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTC---EEEEEESSCH-HHHHHHHHHHH---------H---HSTTCEEEEECCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---eEEEEeCCch-HHHHHHHHHHH---------h---hcCCceEEEEeec
Confidence            37789999999999999999999999996   7788888641 11111111111         0   0125788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-----------------chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-----------------LEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-----------------~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      +++..  ..+++.+++       .++|++|||||...                 ..+.+...+++|+.+++.+++++.+.
T Consensus        84 ~~~~~--~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  161 (288)
T 2x9g_A           84 TNSNV--LPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQR  161 (288)
T ss_dssp             SCSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCccC--CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            98210  011344333       47899999999642                 12456678999999999999988753


Q ss_pred             C---C------CcceEecC
Q psy11862        143 K---K------LVVSLDIG  152 (152)
Q Consensus       143 ~---~------~~~~v~~S  152 (152)
                      .   +      ..++|++|
T Consensus       162 ~~~~~~~~~~~~g~iv~is  180 (288)
T 2x9g_A          162 QKGTNPNCTSSNLSIVNLC  180 (288)
T ss_dssp             C--------CCCEEEEEEC
T ss_pred             HhhcCCCCCCCCeEEEEEe
Confidence            1   2      45788875

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.65  E-value=6.5e-16  Score=107.91  Aligned_cols=116  Identities=16%  Similarity=0.166  Sum_probs=85.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ||+++||||+|+||++++++|++.|+   +|++++|+..      .+.+...            ....++.++.+|++++
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~~~   59 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGK---ATYLTGRSES------KLSTVTN------------CLSNNVGYRARDLASH   59 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCHH------HHHHHHH------------TCSSCCCEEECCTTCH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCC---EEEEEeCCHH------HHHHHHH------------HHhhccCeEeecCCCH
Confidence            47899999999999999999999996   5788888532      2222211            1125677889999985


Q ss_pred             CCCCChhHHHHHhccc----cEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEV----SVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~----d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +      ++.++++.+    |++||+||...       ..+.++..+++|+.++.++++++.+.  ....++|++|
T Consensus        60 ~------~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~is  129 (230)
T 3guy_A           60 Q------EVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIM  129 (230)
T ss_dssp             H------HHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEC
T ss_pred             H------HHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            4      677777643    89999999653       25677889999999999999998753  1123788765

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.65  E-value=1.7e-15  Score=107.86  Aligned_cols=123  Identities=13%  Similarity=0.057  Sum_probs=90.0

Q ss_pred             cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+  ++||++++++|++.|+   +|++++|+... ...+.++++...            ...++.++.+|
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~---~v~~~~~~~~~-~~~~~~~~l~~~------------~~~~~~~~~~D   81 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGA---AVAITYASRAQ-GAEENVKELEKT------------YGIKAKAYKCQ   81 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSC---EEEECBSSSSS-HHHHHHHHHHHH------------HCCCEECCBCC
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCC---eEEEEeCCcch-hHHHHHHHHHHh------------cCCceeEEecC
Confidence            678999999999  9999999999999986   67787776542 112333333211            13678899999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++++      ++.+++       .++|++|||||...       ..+.+...+++|+.++.++++++.+.   .+..++
T Consensus        82 l~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~i  155 (267)
T 3gdg_A           82 VDSYE------SCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSL  155 (267)
T ss_dssp             TTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceE
Confidence            99854      444444       36799999999754       25677889999999999999988431   134688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       156 v~is  159 (267)
T 3gdg_A          156 VITA  159 (267)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            8775

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.64  E-value=7.1e-16  Score=110.16  Aligned_cols=120  Identities=9%  Similarity=0.101  Sum_probs=87.5

Q ss_pred             ccCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++++++||||  +|+||++++++|++.|+   +|++.+|+..     ..++++..            ....++.++.+
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~---~V~~~~r~~~-----~~~~~~~~------------~~~~~~~~~~~   63 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGA---QLVLTGFDRL-----RLIQRITD------------RLPAKAPLLEL   63 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTC---EEEEEECSCH-----HHHHHHHT------------TSSSCCCEEEC
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCC---EEEEEecChH-----HHHHHHHH------------hcCCCceEEEc
Confidence            467899999999  99999999999999986   6788887532     11122111            01245778899


Q ss_pred             ccCCCCCCCChhHHHHHhc----------cccEEEecccccc------------chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         85 DILQANLGIKDSDLLMLQE----------EVSVVFNGAASLK------------LEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~----------~~d~vi~~a~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      |+++++      ++.++++          ++|++|||||...            ..+.++..+++|+.+++++++++.+.
T Consensus        64 Dv~~~~------~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  137 (269)
T 2h7i_A           64 DVQNEE------HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI  137 (269)
T ss_dssp             CTTCHH------HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             cCCCHH------HHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence            999854      4544443          7999999999653            14567788999999999999999763


Q ss_pred             C-CCcceEecC
Q psy11862        143 K-KLVVSLDIG  152 (152)
Q Consensus       143 ~-~~~~~v~~S  152 (152)
                      - .-+++|++|
T Consensus       138 ~~~~g~iv~is  148 (269)
T 2h7i_A          138 MNPGGSIVGMD  148 (269)
T ss_dssp             EEEEEEEEEEE
T ss_pred             hccCCeEEEEc
Confidence            1 125787764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.64  E-value=1.3e-15  Score=109.15  Aligned_cols=120  Identities=9%  Similarity=0.096  Sum_probs=88.4

Q ss_pred             cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+  |+||+++++.|++.|+   +|++++|+..   ..+.++++...             ...+.++.+|
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~---~V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~D   64 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA---TLAFTYLNES---LEKRVRPIAQE-------------LNSPYVYELD   64 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC---EEEEEESSTT---THHHHHHHHHH-------------TTCCCEEECC
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH---HHHHHHHHHHh-------------cCCcEEEEcC
Confidence            578999999999  9999999999999986   6888888753   23333333210             1236788999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEeccccccc-----------hhhHHHHHHhhhHHHHHHHHHHHhcC-CCc
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-----------EAELKENVAANTRGTQRLLDIALKMK-KLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~  146 (152)
                      +++++      ++.+++       .++|++|||||....           .+.++..+++|+.++.++++++.+.- ..+
T Consensus        65 ~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g  138 (275)
T 2pd4_A           65 VSKEE------HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGA  138 (275)
T ss_dssp             TTCHH------HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCC
Confidence            99854      454444       378999999996531           45677899999999999999997641 125


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      +||++|
T Consensus       139 ~iv~is  144 (275)
T 2pd4_A          139 SVLTLS  144 (275)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            788775

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.64  E-value=3.2e-15  Score=109.76  Aligned_cols=128  Identities=16%  Similarity=0.100  Sum_probs=87.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee-cCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC-RAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+||++++++|++.|+   +|++++ |+..  .+.+...++.         .   ....++.++.+|+
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~---~Vv~~~~r~~~--~~~~~~~~l~---------~---~~~~~~~~~~~Dl  106 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSAA--EANALSATLN---------A---RRPNSAITVQADL  106 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHHH---------H---HSTTCEEEEECCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHHH---------h---hcCCeEEEEEeeC
Confidence            6789999999999999999999999996   678887 6432  1111111111         0   0125788999999


Q ss_pred             CCCCC----------C-CChhHHHHHh-------ccccEEEeccccccc---------------------hhhHHHHHHh
Q psy11862         87 LQANL----------G-IKDSDLLMLQ-------EEVSVVFNGAASLKL---------------------EAELKENVAA  127 (152)
Q Consensus        87 ~~~~~----------~-~~~~~~~~~~-------~~~d~vi~~a~~~~~---------------------~~~~~~~~~~  127 (152)
                      ++++.          . -...++.+++       .++|++|||||....                     .+.+...+++
T Consensus       107 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~v  186 (328)
T 2qhx_A          107 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGS  186 (328)
T ss_dssp             SSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHH
T ss_pred             CCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHH
Confidence            98650          0 0000343333       478999999997531                     4566778999


Q ss_pred             hhHHHHHHHHHHHhc---CC------CcceEecC
Q psy11862        128 NTRGTQRLLDIALKM---KK------LVVSLDIG  152 (152)
Q Consensus       128 n~~~~~~l~~~~~~~---~~------~~~~v~~S  152 (152)
                      |+.+++++++++.+.   .+      .++||++|
T Consensus       187 N~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~is  220 (328)
T 2qhx_A          187 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV  220 (328)
T ss_dssp             HTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEEC
Confidence            999999999988642   23      46888876

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.64  E-value=6e-16  Score=111.29  Aligned_cols=97  Identities=21%  Similarity=0.208  Sum_probs=80.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ..++++||||+|+||++++++|++.|+   .|++++|+                                    .+|+++
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~------------------------------------~~Dl~d   51 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNV---EVIPTDVQ------------------------------------DLDITN   51 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSE---EEEEECTT------------------------------------TCCTTC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCC---eEEeccCc------------------------------------cCCCCC
Confidence            457999999999999999999999986   67888773                                    258877


Q ss_pred             CCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.++++  ++|+|||+||....   ..++...+++|+.++.++++++.+. +. +||++|
T Consensus        52 ~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~S  112 (292)
T 1vl0_A           52 VL------AVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQIS  112 (292)
T ss_dssp             HH------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEE
T ss_pred             HH------HHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEec
Confidence            43      6777777  79999999997653   3567789999999999999999987 56 899876

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.64  E-value=1.2e-15  Score=106.90  Aligned_cols=104  Identities=14%  Similarity=0.172  Sum_probs=79.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .+.+++++||||+|+||++++++|++.| +   .|++++|++....                     ......+.++.+|
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~---~V~~~~R~~~~~~---------------------~~~~~~~~~~~~D   75 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTI---KQTLFARQPAKIH---------------------KPYPTNSQIIMGD   75 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTE---EEEEEESSGGGSC---------------------SSCCTTEEEEECC
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCc---eEEEEEcChhhhc---------------------ccccCCcEEEEec
Confidence            3567899999999999999999999998 5   7888888653210                     0112578899999


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++|++      ++.++++++|+|||+++...    +.       ..+.++++++++. +.++||++|
T Consensus        76 l~d~~------~~~~~~~~~D~vv~~a~~~~----~~-------~~~~~~~~~~~~~-~~~~iV~iS  124 (236)
T 3qvo_A           76 VLNHA------ALKQAMQGQDIVYANLTGED----LD-------IQANSVIAAMKAC-DVKRLIFVL  124 (236)
T ss_dssp             TTCHH------HHHHHHTTCSEEEEECCSTT----HH-------HHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             CCCHH------HHHHHhcCCCEEEEcCCCCc----hh-------HHHHHHHHHHHHc-CCCEEEEEe
Confidence            99854      79999999999999998632    11       2355788888886 678999987

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.64  E-value=1.3e-15  Score=109.60  Aligned_cols=123  Identities=15%  Similarity=0.151  Sum_probs=86.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||++++++|+++|+   +|++++|+..  ...+...++..            ....++.++.+|+
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~------------~~~~~~~~~~~Dl   87 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGA---HVVVTARSKE--TLQKVVSHCLE------------LGAASAHYIAGTM   87 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH------------HTCSEEEEEECCT
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHH------------hCCCceEEEeCCC
Confidence            47889999999999999999999999986   6888888532  11111111110            0123688999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEec-ccccc------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEe
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNG-AASLK------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLD  150 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~-a~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~  150 (152)
                      ++++      ++.+++       .++|++||| +|...      ..+.+...+++|+.++.++++++.+.  .+.+++|+
T Consensus        88 ~d~~------~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~  161 (286)
T 1xu9_A           88 EDMT------FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV  161 (286)
T ss_dssp             TCHH------HHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEE
Confidence            9854      344443       378999999 56532      24567778999999999999988652  12358887


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       162 is  163 (286)
T 1xu9_A          162 VS  163 (286)
T ss_dssp             EE
T ss_pred             EC
Confidence            75

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.64  E-value=1.7e-15  Score=108.78  Aligned_cols=118  Identities=14%  Similarity=0.148  Sum_probs=86.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|+..      .+.++..            ....++.++.+|++
T Consensus        28 l~~k~vlVTGas~GIG~aia~~l~~~G~---~Vi~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dl~   86 (281)
T 3ppi_A           28 FEGASAIVSGGAGGLGEATVRRLHADGL---GVVIADLAAE------KGKALAD------------ELGNRAEFVSTNVT   86 (281)
T ss_dssp             GTTEEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH------------HHCTTEEEEECCTT
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCChH------HHHHHHH------------HhCCceEEEEcCCC
Confidence            7889999999999999999999999986   6788887532      2222111            01257889999999


Q ss_pred             CCCCCCChhHHHHHhc------cccEEEec-ccccc------------chhhHHHHHHhhhHHHHHHHHHHHhc------
Q psy11862         88 QANLGIKDSDLLMLQE------EVSVVFNG-AASLK------------LEAELKENVAANTRGTQRLLDIALKM------  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~------~~d~vi~~-a~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~------  142 (152)
                      +.+      ++.++++      ++|++||+ |+...            ..+.+...+++|+.++.++++++...      
T Consensus        87 ~~~------~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  160 (281)
T 3ppi_A           87 SED------SVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEP  160 (281)
T ss_dssp             CHH------HHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCC
T ss_pred             CHH------HHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc
Confidence            854      4555543      68999999 54321            13457889999999999999988642      


Q ss_pred             ---CCCcceEecC
Q psy11862        143 ---KKLVVSLDIG  152 (152)
Q Consensus       143 ---~~~~~~v~~S  152 (152)
                         .+..++|++|
T Consensus       161 ~~~~~~g~iv~is  173 (281)
T 3ppi_A          161 RENGERGALVLTA  173 (281)
T ss_dssp             CTTSCCEEEEEEC
T ss_pred             cccCCCeEEEEEe
Confidence               1335788875

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.63  E-value=4e-15  Score=106.87  Aligned_cols=120  Identities=11%  Similarity=0.151  Sum_probs=89.2

Q ss_pred             ccCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++++++||||+  ++||++++++|++.|+   +|++++|+.    ..+.++++...             ..++.++.+
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~---~V~~~~r~~----~~~~~~~l~~~-------------~~~~~~~~~   82 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGA---ELAFTYVGQ----FKDRVEKLCAE-------------FNPAAVLPC   82 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTC---EEEEEECTT----CHHHHHHHHGG-------------GCCSEEEEC
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCC---EEEEeeCch----HHHHHHHHHHh-------------cCCceEEEe
Confidence            3678999999998  5599999999999986   688888865    23444444221             145788999


Q ss_pred             ccCCCCCCCChhHHHHHh-------ccccEEEecccccc------------chhhHHHHHHhhhHHHHHHHHHHHhc--C
Q psy11862         85 DILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK------------LEAELKENVAANTRGTQRLLDIALKM--K  143 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~--~  143 (152)
                      |+++++      ++.+++       .++|++|||||...            ..+.+...+++|+.++.++++++.+.  .
T Consensus        83 Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  156 (280)
T 3nrc_A           83 DVISDQ------EIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKN  156 (280)
T ss_dssp             CTTCHH------HHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             ecCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999854      454444       36799999999753            24566778999999999999998753  1


Q ss_pred             CCcceEecC
Q psy11862        144 KLVVSLDIG  152 (152)
Q Consensus       144 ~~~~~v~~S  152 (152)
                      +..++|++|
T Consensus       157 ~~g~iv~is  165 (280)
T 3nrc_A          157 RNASMVALT  165 (280)
T ss_dssp             TTCEEEEEE
T ss_pred             CCCeEEEEe
Confidence            346788764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.63  E-value=1.3e-15  Score=109.51  Aligned_cols=118  Identities=18%  Similarity=0.254  Sum_probs=86.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+|+||++++++|+++|+   +|++.+|+.      +.+.++..            ....++.++.+|++
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~------~~~~~~~~------------~~~~~~~~~~~Dv~   61 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGA---RVAVLDKSA------ERLRELEV------------AHGGNAVGVVGDVR   61 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH------------HTBTTEEEEECCTT
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCH------HHHHHHHH------------HcCCcEEEEEcCCC
Confidence            6789999999999999999999999996   778888753      22222211            01257889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc------------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCc
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------------EAELKENVAANTRGTQRLLDIALKM--KKLV  146 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~  146 (152)
                      +++      ++.+++       .++|++|||||....            .+.|+..+++|+.+++++++++.+.  .+..
T Consensus        62 ~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g  135 (281)
T 3zv4_A           62 SLQ------DQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRG  135 (281)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            854      444443       478999999997431            2347788999999999999998652  1125


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       136 ~iv~is  141 (281)
T 3zv4_A          136 SVVFTI  141 (281)
T ss_dssp             EEEEEC
T ss_pred             eEEEEe
Confidence            777765

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.63  E-value=3.1e-15  Score=115.98  Aligned_cols=125  Identities=18%  Similarity=0.175  Sum_probs=91.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecCCCC-----------CCHHHHHHHHhcChhhhhhhhhccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRAKRG-----------LTPKARLAEFSKLPVFERLRKECPA   74 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~   74 (152)
                      +-.+++++||||+|+||.++++.|+++|.  ..+++. +|+...           ....+...++..             
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~--~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~-------------  312 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGA--GHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD-------------  312 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTC--CEEEEEECCCC---------------CHHHHHHHHH-------------
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCC--CEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh-------------
Confidence            34678999999999999999999999986  356776 787532           112222222211             


Q ss_pred             cCCcEEEEEcccCCCCCCCChhHHHHHhc------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         75 QLSRLHIIEGDILQANLGIKDSDLLMLQE------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        75 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      .+.++.++.+|++|++      ++.+++.      ++|+|||+||....       .+.+..++++|+.++.++.+++..
T Consensus       313 ~g~~v~~~~~Dvtd~~------~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~  386 (525)
T 3qp9_A          313 LGATATVVTCDLTDAE------AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLRE  386 (525)
T ss_dssp             HTCEEEEEECCTTSHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEEECCCCCHH------HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            1467999999999965      5666654      57999999997542       566788999999999999999987


Q ss_pred             cC---C-CcceEecC
Q psy11862        142 MK---K-LVVSLDIG  152 (152)
Q Consensus       142 ~~---~-~~~~v~~S  152 (152)
                      ..   + .++||++|
T Consensus       387 ~~~~~~~~~~iV~~S  401 (525)
T 3qp9_A          387 AAAAGGRPPVLVLFS  401 (525)
T ss_dssp             TC----CCCEEEEEE
T ss_pred             ccccCCCCCEEEEEC
Confidence            52   1 67888875

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.63  E-value=8.2e-15  Score=103.60  Aligned_cols=115  Identities=17%  Similarity=0.163  Sum_probs=82.9

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .-+++++++||||+|+||++++++|+++|+   +|++++|+.      +.++++                 ..+.++ +|
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~------~~~~~~-----------------~~~~~~-~D   67 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGA---EVTICARNE------ELLKRS-----------------GHRYVV-CD   67 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHT-----------------CSEEEE-CC
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCH------HHHHhh-----------------CCeEEE-ee
Confidence            457899999999999999999999999986   678888853      112111                 245666 99


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      + ...    .+.+.+.+.++|++|||||....       .+.++..+++|+.++.++.+++.+.   .+.++||++|
T Consensus        68 ~-~~~----~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~is  139 (249)
T 1o5i_A           68 L-RKD----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAIT  139 (249)
T ss_dssp             T-TTC----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             H-HHH----HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEc
Confidence            8 222    23344444489999999996532       4667889999999998887776431   2457898876

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.63  E-value=2.1e-15  Score=104.59  Aligned_cols=102  Identities=17%  Similarity=0.246  Sum_probs=78.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHH-hhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~-~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +++++||||+|+||++++++|+ +.|+   +|++++|++.     ..+..+..             ...++.++.+|+++
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~---~V~~~~r~~~-----~~~~~~~~-------------~~~~~~~~~~D~~d   63 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDM---HITLYGRQLK-----TRIPPEII-------------DHERVTVIEGSFQN   63 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCC---EEEEEESSHH-----HHSCHHHH-------------TSTTEEEEECCTTC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCc---eEEEEecCcc-----ccchhhcc-------------CCCceEEEECCCCC
Confidence            4679999999999999999999 7886   7788888532     01111100             13678899999998


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.++++++|++||++|..            |+. +.++++++++. +.++||++|
T Consensus        64 ~~------~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iS  107 (221)
T 3r6d_A           64 PG------XLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVS  107 (221)
T ss_dssp             HH------HHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEE
T ss_pred             HH------HHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEe
Confidence            54      7899999999999999864            233 88888988886 678999876

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.63  E-value=2.3e-15  Score=106.89  Aligned_cols=123  Identities=17%  Similarity=0.161  Sum_probs=87.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHh---hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLR---SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~---~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      +++++++||||+|+||++++++|++   .|+   +|++++|+..  ...+...++.         ..  ....++.++.+
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~---~V~~~~r~~~--~~~~~~~~l~---------~~--~~~~~~~~~~~   67 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS---VMLVSARSES--MLRQLKEELG---------AQ--QPDLKVVLAAA   67 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC---EEEEEESCHH--HHHHHHHHHH---------HH--CTTSEEEEEEC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC---eEEEEeCCHH--HHHHHHHHHH---------hh--CCCCeEEEEec
Confidence            6789999999999999999999999   786   7788888532  1111111111         00  01256889999


Q ss_pred             ccCCCCCCCChhHHHHHhc---------ccc--EEEecccccc----------chhhHHHHHHhhhHHHHHHHHHHHhcC
Q psy11862         85 DILQANLGIKDSDLLMLQE---------EVS--VVFNGAASLK----------LEAELKENVAANTRGTQRLLDIALKMK  143 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~---------~~d--~vi~~a~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~  143 (152)
                      |+++++      ++.++++         ++|  ++|||||...          ..+.++..+++|+.+++++++++.+.-
T Consensus        68 Dv~~~~------~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  141 (259)
T 1oaa_A           68 DLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAF  141 (259)
T ss_dssp             CTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTS
T ss_pred             CCCCHH------HHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999854      4444332         467  9999999642          235677899999999999999997641


Q ss_pred             -----CCcceEecC
Q psy11862        144 -----KLVVSLDIG  152 (152)
Q Consensus       144 -----~~~~~v~~S  152 (152)
                           +.++||++|
T Consensus       142 ~~~~~~~g~iv~is  155 (259)
T 1oaa_A          142 QDSPGLSKTVVNIS  155 (259)
T ss_dssp             CCCTTCEEEEEEEC
T ss_pred             hhccCCCceEEEEc
Confidence                 235788876

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.63  E-value=2.3e-15  Score=106.43  Aligned_cols=122  Identities=16%  Similarity=0.208  Sum_probs=86.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|+++.++.. ....+...++..             ...++.++.+|++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~   67 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGA---LVAIHYGNRK-EEAEETVYEIQS-------------NGGSAFSIGANLE   67 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCS-HHHHHHHHHHHH-------------TTCEEEEEECCTT
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCch-HHHHHHHHHHHh-------------cCCceEEEecCcC
Confidence            6789999999999999999999999986   5666543322 122222222221             1357888999998


Q ss_pred             CCCCCCChhHHHHHhc-------------cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862         88 QANLGIKDSDLLMLQE-------------EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLV  146 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-------------~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~  146 (152)
                      +.+      ++..+++             ++|++|||||...       ..+.++..+++|+.++.++++++.+. .+..
T Consensus        68 ~~~------~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  141 (255)
T 3icc_A           68 SLH------GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS  141 (255)
T ss_dssp             SHH------HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE
T ss_pred             CHH------HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCC
Confidence            854      3443332             2899999999753       24567778999999999999998764 1235


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       142 ~iv~is  147 (255)
T 3icc_A          142 RIINIS  147 (255)
T ss_dssp             EEEEEC
T ss_pred             EEEEeC
Confidence            788775

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.63  E-value=3e-15  Score=115.18  Aligned_cols=121  Identities=21%  Similarity=0.247  Sum_probs=93.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +++++||||+|+||.++++.|+++|+  ..|++.+|+.... ...+...++..             .+.++.++.+|++|
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga--~~vvl~~R~~~~~~~~~~l~~~l~~-------------~g~~v~~~~~Dvtd  303 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGA--AHLVLTSRRGADAPGAAELRAELEQ-------------LGVRVTIAACDAAD  303 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHHHH-------------TTCEEEEEECCTTC
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCC--cEEEEEeCCCCChHHHHHHHHHHHh-------------cCCeEEEEEccCCC
Confidence            48999999999999999999999986  4788888865332 23333333322             13689999999999


Q ss_pred             CCCCCChhHHHHHhc------cccEEEeccccc-c-------chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQE------EVSVVFNGAASL-K-------LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~------~~d~vi~~a~~~-~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.++++      ++|+|||+||.. .       ..+.+..++++|+.+++++.+++.+. ..++||++|
T Consensus       304 ~~------~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~S  374 (496)
T 3mje_A          304 RE------ALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFS  374 (496)
T ss_dssp             HH------HHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEE
T ss_pred             HH------HHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEe
Confidence            65      5666664      589999999976 2       25667889999999999999999886 577888875

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.62  E-value=3.4e-15  Score=107.84  Aligned_cols=109  Identities=21%  Similarity=0.227  Sum_probs=84.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +++++||||+|++|++++++|++.| +   .|++++|++.... .+.+.                  ..++.++.+|++|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~---~V~~~~R~~~~~~-~~~l~------------------~~~~~~~~~D~~d   62 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF---KVRVVTRNPRKKA-AKELR------------------LQGAEVVQGDQDD   62 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS---EEEEEESCTTSHH-HHHHH------------------HTTCEEEECCTTC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc---eEEEEEcCCCCHH-HHHHH------------------HCCCEEEEecCCC
Confidence            5789999999999999999999997 5   7888999754210 11111                  1457889999998


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++      ++.+.++++|+|||+++.....     ..+.|+.++.++++++.+. ++++||++|
T Consensus        63 ~~------~l~~~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~~aa~~~-gv~~iv~~S  114 (299)
T 2wm3_A           63 QV------IMELALNGAYATFIVTNYWESC-----SQEQEVKQGKLLADLARRL-GLHYVVYSG  114 (299)
T ss_dssp             HH------HHHHHHTTCSEEEECCCHHHHT-----CHHHHHHHHHHHHHHHHHH-TCSEEEECC
T ss_pred             HH------HHHHHHhcCCEEEEeCCCCccc-----cchHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence            54      7899999999999999853211     2346788999999999987 688999976

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.62  E-value=1.7e-15  Score=109.87  Aligned_cols=109  Identities=21%  Similarity=0.263  Sum_probs=83.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH--HHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP--KARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+||||+|++|++++++|++.|+   .|++++|+......  .+.+..+.               ..++.++.+|++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~~~---------------~~~~~~~~~D~~   65 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH---PTYVLFRPEVVSNIDKVQMLLYFK---------------QLGAKLIEASLD   65 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC---CEEEECCSCCSSCHHHHHHHHHHH---------------TTTCEEECCCSS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC---cEEEEECCCcccchhHHHHHHHHH---------------hCCeEEEeCCCC
Confidence            57899999999999999999999986   67888987643211  11121111               246888999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  150 (152)
                      +++      ++.++++++|+|||+++....        ..|+.++.++++++.+.+++++||+
T Consensus        66 d~~------~l~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~l~~aa~~~g~v~~~v~  114 (313)
T 1qyd_A           66 DHQ------RLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEAGNIKRFLP  114 (313)
T ss_dssp             CHH------HHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred             CHH------HHHHHHhCCCEEEECCccccc--------hhhHHHHHHHHHHHHhcCCCceEEe
Confidence            854      789999999999999987542        2367788999999998733889885

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.62  E-value=2.6e-15  Score=106.73  Aligned_cols=121  Identities=19%  Similarity=0.145  Sum_probs=85.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|+..  ...+...++..             ...++.++.+|++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~Dv~   64 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGA---TVYITGRHLD--TLRVVAQEAQS-------------LGGQCVPVVCDSS   64 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------HSSEEEEEECCTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH--HHHHHHHHHHH-------------cCCceEEEECCCC
Confidence            6789999999999999999999999986   6788887532  11111111111             1256888999999


Q ss_pred             CCCCCCChhHHHHH--------hccccEEEeccc--cc-------c-----chhhHHHHHHhhhHHHHHHHHHHHhc---
Q psy11862         88 QANLGIKDSDLLML--------QEEVSVVFNGAA--SL-------K-----LEAELKENVAANTRGTQRLLDIALKM---  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~--------~~~~d~vi~~a~--~~-------~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---  142 (152)
                      +++      ++.++        +.++|++|||||  ..       .     ..+.+..++++|+.+++++.+++.+.   
T Consensus        65 ~~~------~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  138 (260)
T 2qq5_A           65 QES------EVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVP  138 (260)
T ss_dssp             SHH------HHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGG
T ss_pred             CHH------HHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhh
Confidence            864      34333        346799999994  32       1     14567889999999999988877531   


Q ss_pred             CCCcceEecC
Q psy11862        143 KKLVVSLDIG  152 (152)
Q Consensus       143 ~~~~~~v~~S  152 (152)
                      .+.+++|++|
T Consensus       139 ~~~g~iv~is  148 (260)
T 2qq5_A          139 AGQGLIVVIS  148 (260)
T ss_dssp             GTCCEEEEEC
T ss_pred             cCCcEEEEEc
Confidence            2456888876

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.62  E-value=2.3e-15  Score=107.17  Aligned_cols=101  Identities=18%  Similarity=0.170  Sum_probs=81.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|++ |+   .|++++|++...                          .+   +.+|+++++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~---~V~~~~r~~~~~--------------------------~~---~~~Dl~~~~   47 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RH---EVIKVYNSSEIQ--------------------------GG---YKLDLTDFP   47 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TS---CEEEEESSSCCT--------------------------TC---EECCTTSHH
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CC---eEEEecCCCcCC--------------------------CC---ceeccCCHH
Confidence            4799999999999999999995 65   678888865310                          11   678998854


Q ss_pred             CCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++.+++++  +|+|||+||....   ..++...+++|+.++.++++++.+. +. +||++|
T Consensus        48 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~S  106 (273)
T 2ggs_A           48 ------RLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHIS  106 (273)
T ss_dssp             ------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEE
T ss_pred             ------HHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEe
Confidence                  67777775  9999999997653   3567789999999999999999986 44 888876

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.62  E-value=9.9e-16  Score=109.92  Aligned_cols=95  Identities=21%  Similarity=0.229  Sum_probs=79.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||+++++.|++.|+   .|++++|.                                    .+|+++++
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~------------------------------------~~D~~d~~   46 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEY---DIYPFDKK------------------------------------LLDITNIS   46 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTE---EEEEECTT------------------------------------TSCTTCHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCC---EEEEeccc------------------------------------ccCCCCHH
Confidence            3899999999999999999999986   77888872                                    26887744


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++.++++  ++|+|||+||....   ..++...+++|+.++.++++++.+. +. +||++|
T Consensus        47 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~S  105 (287)
T 3sc6_A           47 ------QVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYIS  105 (287)
T ss_dssp             ------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEE
T ss_pred             ------HHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEc
Confidence                  6777777  69999999998764   2467889999999999999999987 55 698876

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.62  E-value=1.3e-15  Score=117.91  Aligned_cols=103  Identities=17%  Similarity=0.131  Sum_probs=80.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +|+|+||||+|+||+++++.|++.|+   .|++++|+....                          .   .+.+|+.+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~---~V~~l~R~~~~~--------------------------~---~v~~d~~~~  194 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGH---EVIQLVRKEPKP--------------------------G---KRFWDPLNP  194 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSSCCT--------------------------T---CEECCTTSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCc--------------------------c---ceeecccch
Confidence            78999999999999999999999987   789999975421                          1   145676543


Q ss_pred             CCCCChhHHHHHhccccEEEecccccc----chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLK----LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                              +...++++|+|||+||...    ...+...++++|+.++.++++++....++++||++|
T Consensus       195 --------~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~S  253 (516)
T 3oh8_A          195 --------ASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISAS  253 (516)
T ss_dssp             --------CTTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEE
T ss_pred             --------hHHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence                    2445578999999999753    245667789999999999999955544788999986

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.62  E-value=6.8e-15  Score=112.30  Aligned_cols=119  Identities=16%  Similarity=0.132  Sum_probs=88.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++++||||+|+||.++++.|+++|+   +|++++|+..    .+.+.+....              .++.++.+|+
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga---~Vvl~~r~~~----~~~l~~~~~~--------------~~~~~~~~Dv  268 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGA---TVVAIDVDGA----AEDLKRVADK--------------VGGTALTLDV  268 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECGGG----HHHHHHHHHH--------------HTCEEEECCT
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCC---EEEEEeCCcc----HHHHHHHHHH--------------cCCeEEEEec
Confidence            35789999999999999999999999985   6788887542    2233222110              1356789999


Q ss_pred             CCCCCCCChhHHHHHhc-------c-ccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQE-------E-VSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~-------~-~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++++      ++.++++       + +|++|||||...       ..+.++.++++|+.+++++.+++...   .+..+|
T Consensus       269 td~~------~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~i  342 (454)
T 3u0b_A          269 TADD------AVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRV  342 (454)
T ss_dssp             TSTT------HHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEE
Confidence            9976      3444332       4 999999999764       25678889999999999999999864   134688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       343 V~iS  346 (454)
T 3u0b_A          343 IGLS  346 (454)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            8876

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.62  E-value=1.6e-15  Score=108.03  Aligned_cols=121  Identities=14%  Similarity=0.143  Sum_probs=89.3

Q ss_pred             ccCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++++++||||+  |+||++++++|++.|+   +|++.+|+..   ..+.+.++...             ...+.++.+
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~~~~~~-------------~~~~~~~~~   71 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA---ELAFTYVGDR---FKDRITEFAAE-------------FGSELVFPC   71 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSGG---GHHHHHHHHHH-------------TTCCCEEEC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC---CEEEEecchh---hHHHHHHHHHH-------------cCCcEEEEC
Confidence            4678999999999  9999999999999986   7788888632   23333333211             135778999


Q ss_pred             ccCCCCCCCChhHHHHHhc-------cccEEEecccccc------------chhhHHHHHHhhhHHHHHHHHHHHhcC-C
Q psy11862         85 DILQANLGIKDSDLLMLQE-------EVSVVFNGAASLK------------LEAELKENVAANTRGTQRLLDIALKMK-K  144 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~  144 (152)
                      |+++++      ++.++++       ++|++|||||...            ..+.+...+++|+.++.++++++.+.- .
T Consensus        72 Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  145 (271)
T 3ek2_A           72 DVADDA------QIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD  145 (271)
T ss_dssp             CTTCHH------HHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE
T ss_pred             CCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc
Confidence            999854      4555443       6899999999753            245677799999999999999987641 2


Q ss_pred             CcceEecC
Q psy11862        145 LVVSLDIG  152 (152)
Q Consensus       145 ~~~~v~~S  152 (152)
                      ..++|++|
T Consensus       146 ~g~iv~is  153 (271)
T 3ek2_A          146 DASLLTLS  153 (271)
T ss_dssp             EEEEEEEE
T ss_pred             CceEEEEe
Confidence            34677764

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.62  E-value=1.1e-14  Score=103.47  Aligned_cols=122  Identities=10%  Similarity=0.090  Sum_probs=87.0

Q ss_pred             cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++|+++||||+|  +||+++++.|+++|+   +|++.+|+..  . .+.+.+...           .....++.++.+|
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga---~Vvi~~r~~~--~-~~~~~~~~~-----------~~~~~~~~~~~~D   66 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA---KLVFTYRKER--S-RKELEKLLE-----------QLNQPEAHLYQID   66 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHHTTC---EEEEEESSGG--G-HHHHHHHHG-----------GGTCSSCEEEECC
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCC---EEEEEECCHH--H-HHHHHHHHH-----------hcCCCcEEEEEcc
Confidence            7899999999876  999999999999996   7788888643  1 222222211           0113578889999


Q ss_pred             cCCCCCCCChhHHHHH-------hccccEEEeccccccc-----------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862         86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-----------EAELKENVAANTRGTQRLLDIALKM-KKLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~  146 (152)
                      +++++      ++.++       +.++|++|||||....           .+.|...+++|+.++..+.+.+... ++-.
T Consensus        67 v~~~~------~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G  140 (256)
T 4fs3_A           67 VQSDE------EVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGG  140 (256)
T ss_dssp             TTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCE
T ss_pred             CCCHH------HHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            99865      44433       4478999999996431           3456667899999999988887753 2335


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       141 ~IVnis  146 (256)
T 4fs3_A          141 SIVATT  146 (256)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            788764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.61  E-value=1.4e-15  Score=109.65  Aligned_cols=98  Identities=18%  Similarity=0.170  Sum_probs=80.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|+ .|+   .|++++|+..                                .+.+|+++++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~---~V~~~~r~~~--------------------------------~~~~D~~d~~   44 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVG---NLIALDVHSK--------------------------------EFCGDFSNPK   44 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTS---EEEEECTTCS--------------------------------SSCCCTTCHH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCC---eEEEeccccc--------------------------------cccccCCCHH
Confidence            479999999999999999999 776   7788887531                                1357888744


Q ss_pred             CCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++.+++++  +|+|||+||....   ..++...+++|+.++.++++++.+. ++ +||++|
T Consensus        45 ------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~S  103 (299)
T 1n2s_A           45 ------GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYS  103 (299)
T ss_dssp             ------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEE
T ss_pred             ------HHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEe
Confidence                  67787775  9999999997653   3567778999999999999999886 55 799876

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.61  E-value=1.6e-15  Score=107.36  Aligned_cols=106  Identities=11%  Similarity=0.029  Sum_probs=81.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ||+++||||+|+||++++++|++.|+   +|++++|+....  .                       ..   +.+|++++
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~--~-----------------------~~---~~~Dl~~~   49 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGH---QIVGIDIRDAEV--I-----------------------AD---LSTAEGRK   49 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSSE--E-----------------------CC---TTSHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCchhh--c-----------------------cc---cccCCCCH
Confidence            46899999999999999999999986   678888865311  0                       01   45788774


Q ss_pred             CCCCChhHHHHHh----ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQ----EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~----~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +      ++.+++    .++|++|||||.......++..+++|+.++.++++++.+.   .+.+++|++|
T Consensus        50 ~------~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~is  113 (257)
T 1fjh_A           50 Q------AIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVIS  113 (257)
T ss_dssp             H------HHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEEC
T ss_pred             H------HHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEEC
Confidence            4      566665    4569999999986534568899999999999999998642   2457898876

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.61  E-value=7.1e-15  Score=103.23  Aligned_cols=116  Identities=20%  Similarity=0.103  Sum_probs=83.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +|+++||||+|+||++++++|++.|+   +|++++|+...     ..+++                  .+.++.+|+++ 
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~---~V~~~~r~~~~-----~~~~~------------------~~~~~~~D~~~-   54 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY---RVAIASRNPEE-----AAQSL------------------GAVPLPTDLEK-   54 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHH-----HHHHH------------------TCEEEECCTTT-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH-----HHHhh------------------CcEEEecCCch-
Confidence            57999999999999999999999986   67888886431     11110                  16678899998 


Q ss_pred             CC-CCChhHHHHHhccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         90 NL-GIKDSDLLMLQEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        90 ~~-~~~~~~~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +. .-..+++.+.+.++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.+++|++|
T Consensus        55 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~is  128 (239)
T 2ekp_A           55 DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIG  128 (239)
T ss_dssp             SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence            41 0001112223457999999999653       24678889999999999999988542   2467898876

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.61  E-value=8.3e-16  Score=105.42  Aligned_cols=110  Identities=20%  Similarity=0.217  Sum_probs=82.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|+++     +|++++|++.      .+..+..     .    .    .. .++.+|+++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~~------~~~~~~~-----~----~----~~-~~~~~D~~~~~   55 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRAG------ALAELAR-----E----V----GA-RALPADLADEL   55 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCHH------HHHHHHH-----H----H----TC-EECCCCTTSHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCHH------HHHHHHH-----h----c----cC-cEEEeeCCCHH
Confidence            57999999999999999999886     6788888532      2222111     0    0    11 67889999854


Q ss_pred             CCCChhHHHHHhc---cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE---EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~---~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ++.++++   ++|++||+||....       .+++...+++|+.++.++++++.+. +.++||++|
T Consensus        56 ------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~s  120 (207)
T 2yut_A           56 ------EAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFG  120 (207)
T ss_dssp             ------HHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEEC
T ss_pred             ------HHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEc
Confidence                  6777776   89999999997532       4567889999999999999999554 567898876

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.60  E-value=5e-15  Score=108.67  Aligned_cols=125  Identities=20%  Similarity=0.158  Sum_probs=86.9

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ++++++||||+|+||++++++|++.|++   |+++.|+... ....+.+.....          ......++.++.+|++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~---v~~v~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~Dv~   67 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQ---SFKVYATLRDLKTQGRLWEAARA----------LACPPGSLETLQLDVR   67 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTC---CEEEEEEESCGGGTHHHHHHHHH----------TTCCTTSEEEEECCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCc---eEEEEeecCcHHHHHHHHHHhhh----------ccCCCCceEEEEecCC
Confidence            3689999999999999999999999974   4455554321 111222221110          0011257889999999


Q ss_pred             CCCCCCChhHHHHHhc-----cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE-----EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~-----~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +++      ++.++++     ++|++|||||...       ..+.++..+++|+.++.++++++.+.   .+.++||++|
T Consensus        68 d~~------~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~is  141 (327)
T 1jtv_A           68 DSK------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTG  141 (327)
T ss_dssp             CHH------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CHH------HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEC
Confidence            854      6777665     4899999998643       24567889999999999999997431   2457888875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.60  E-value=1.3e-15  Score=110.10  Aligned_cols=108  Identities=22%  Similarity=0.310  Sum_probs=81.9

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      +++||||+|+||++++++|++.| +   .|++++|+..... ...+.                    .+. +.+|+++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~-~~~~~--------------------~~~-~~~d~~~~~   55 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGIT---DILVVDNLKDGTK-FVNLV--------------------DLN-IADYMDKED   55 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCC---CEEEEECCSSGGG-GHHHH--------------------TSC-CSEEEEHHH
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCc---EEEEEccCCCCch-hhhcC--------------------cce-eccccccHH
Confidence            48999999999999999999998 5   5677887654211 11110                    111 567887743


Q ss_pred             CCCChhHHHHHhcc-----ccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEE-----VSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~-----~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            .+..++++     +|+|||+||.... ..++...+++|+.++.++++++.+. ++ +||++|
T Consensus        56 ------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~S  115 (310)
T 1eq2_A           56 ------FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYAS  115 (310)
T ss_dssp             ------HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEE
T ss_pred             ------HHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEe
Confidence                  57777764     9999999997653 4567789999999999999999987 57 999876

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.60  E-value=8.1e-16  Score=111.69  Aligned_cols=110  Identities=21%  Similarity=0.291  Sum_probs=74.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-HHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-PKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++|+||||+|+||++++++|++.|+   .|++++|+..... ..+.+..+              .....+.++.+|+
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~~~~Dl   67 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGE---EVTVLDDLRVPPMIPPEGTGKF--------------LEKPVLELEERDL   67 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC---CEEEECCCSSCCSSCCTTSSEE--------------ECSCGGGCCHHHH
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCC---EEEEEecCCcccccchhhhhhh--------------ccCCCeeEEeCcc
Confidence            5578999999999999999999999987   6788888654110 00000000              0001122222222


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                                      .++|+|||+|+....   ..+....++ |+.++.++++++.+. ++++|||+|
T Consensus        68 ----------------~~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~S  118 (321)
T 3vps_A           68 ----------------SDVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGS  118 (321)
T ss_dssp             ----------------TTEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             ----------------ccCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEec
Confidence                            278999999997653   233344566 999999999999998 688999986

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.59  E-value=1.2e-14  Score=102.82  Aligned_cols=108  Identities=14%  Similarity=0.099  Sum_probs=81.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++++||||+|+||++++++|++.|+   +|++++|+....                           .-..+.+|++|
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~~---------------------------~~~~~~~d~~d   70 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW---NTISIDFRENPN---------------------------ADHSFTIKDSG   70 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCTT---------------------------SSEEEECSCSS
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCcccc---------------------------cccceEEEeCC
Confidence            368999999999999999999999996   688889875421                           11245678877


Q ss_pred             CCCCCChhHHHHHhc-------cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQE-------EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKMK-KLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  152 (152)
                      ++      ++.++++       ++|++|||||...        ..+.+...+++|+.++.++++++.+.- ..++||++|
T Consensus        71 ~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  144 (251)
T 3orf_A           71 EE------EIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTG  144 (251)
T ss_dssp             HH------HHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HH------HHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEe
Confidence            54      4554443       6799999999632        256677899999999999999987641 224788876

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.59  E-value=4e-15  Score=101.75  Aligned_cols=100  Identities=15%  Similarity=0.174  Sum_probs=77.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++||||+|+||++++++|+ +|+   +|++++|+..                                .+.+|+++++
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~---~V~~~~r~~~--------------------------------~~~~D~~~~~   47 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKA---EVITAGRHSG--------------------------------DVTVDITNID   47 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTS---EEEEEESSSS--------------------------------SEECCTTCHH
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCC---eEEEEecCcc--------------------------------ceeeecCCHH
Confidence            479999999999999999999 886   6788887532                                3578998854


Q ss_pred             CCCChhHHHHHhc---cccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEecC
Q psy11862         91 LGIKDSDLLMLQE---EVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKMK-KLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~---~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  152 (152)
                            ++.++++   ++|++||+||...       ..+.+...+++|+.++.++++++.+.- ..++||++|
T Consensus        48 ------~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s  114 (202)
T 3d7l_A           48 ------SIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTT  114 (202)
T ss_dssp             ------HHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEEC
T ss_pred             ------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEc
Confidence                  5666655   4899999999643       135667789999999999999987641 125788875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.57  E-value=4.5e-15  Score=106.29  Aligned_cols=101  Identities=15%  Similarity=0.208  Sum_probs=76.0

Q ss_pred             eEEEcCCcchhHHHHHHHHHhh--CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRS--CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++||||+|++|++++++|++.  |+   .|++++|++...  . .+.                  ..++.++.+|++|+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~--~-~~~------------------~~~~~~~~~D~~d~   56 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS---QIVAIVRNPAKA--Q-ALA------------------AQGITVRQADYGDE   56 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG---GEEEEESCTTTC--H-HHH------------------HTTCEEEECCTTCH
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc---eEEEEEcChHhh--h-hhh------------------cCCCeEEEcCCCCH
Confidence            4899999999999999999998  75   678888865421  1 111                  13577889999985


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++.++++++|+|||+|+...         ..|+.++.++++++.+. ++++||++|
T Consensus        57 ~------~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~l~~a~~~~-~~~~~v~~S  103 (286)
T 2zcu_A           57 A------ALTSALQGVEKLLLISSSEV---------GQRAPQHRNVINAAKAA-GVKFIAYTS  103 (286)
T ss_dssp             H------HHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             H------HHHHHHhCCCEEEEeCCCCc---------hHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence            4      78899999999999998531         24788999999999987 688999986

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.57  E-value=1.1e-14  Score=105.45  Aligned_cols=108  Identities=17%  Similarity=0.288  Sum_probs=79.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++|+||||+|++|++++++|++.|+   .|++++|+.......+..+.+..      +      ...++.++.+|++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~~~~~~~------l------~~~~v~~v~~D~~d~   68 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH---PTFLLVRESTASSNSEKAQLLES------F------KASGANIVHGSIDDH   68 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC---CEEEECCCCCTTTTHHHHHHHHH------H------HTTTCEEECCCTTCH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC---CEEEEECCcccccCHHHHHHHHH------H------HhCCCEEEEeccCCH
Confidence            57899999999999999999999986   56888887543201111111100      0      024688899999885


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEe
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLD  150 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  150 (152)
                      +      ++.++++++|+|||+++...            +.++.++++++.+.+++++||+
T Consensus        69 ~------~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~  111 (308)
T 1qyc_A           69 A------SLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP  111 (308)
T ss_dssp             H------HHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC
T ss_pred             H------HHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee
Confidence            4      68899999999999998642            4456789999988733888875

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.57  E-value=2.9e-14  Score=103.09  Aligned_cols=108  Identities=17%  Similarity=0.288  Sum_probs=78.8

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC-CCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK-RGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +++++||||+|++|++++++|++.|+   .|++++|+. ......+....+..      +.      ..++.++.+|++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~~~------l~------~~~v~~v~~D~~d   66 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN---PTYALVRKTITAANPETKEELIDN------YQ------SLGVILLEGDIND   66 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC---CEEEEECCSCCSSCHHHHHHHHHH------HH------HTTCEEEECCTTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC---cEEEEECCCcccCChHHHHHHHHH------HH------hCCCEEEEeCCCC
Confidence            57899999999999999999999986   567888875 22111022211100      00      1467889999988


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEe
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLD  150 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  150 (152)
                      ++      ++.++++++|+|||+++...            +.++.++++++.+.+++++||+
T Consensus        67 ~~------~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~  110 (307)
T 2gas_A           67 HE------TLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP  110 (307)
T ss_dssp             HH------HHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC
T ss_pred             HH------HHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee
Confidence            54      78999999999999998653            4556788999988733888874

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.56  E-value=2e-14  Score=104.56  Aligned_cols=102  Identities=22%  Similarity=0.360  Sum_probs=78.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++||||+|++|++++++|++.|+   .|++++|+...  ..+.+..+..               .++.++.+|++|++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~--~~~~~~~l~~---------------~~v~~v~~Dl~d~~   71 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGH---PTYVFTRPNSS--KTTLLDEFQS---------------LGAIIVKGELDEHE   71 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTC---CEEEEECTTCS--CHHHHHHHHH---------------TTCEEEECCTTCHH
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCC---cEEEEECCCCc--hhhHHHHhhc---------------CCCEEEEecCCCHH
Confidence            5899999999999999999999986   56888887641  1222222211               46788999999854


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEe
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLD  150 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  150 (152)
                            ++.++++++|+|||+++...            +.++.++++++.+.+++++||+
T Consensus        72 ------~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~  113 (318)
T 2r6j_A           72 ------KLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP  113 (318)
T ss_dssp             ------HHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC
T ss_pred             ------HHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe
Confidence                  78999999999999998642            4567889999988733888875

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.56  E-value=9e-15  Score=103.01  Aligned_cols=121  Identities=26%  Similarity=0.255  Sum_probs=78.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|++ |+   .|++++|+.      +.+..+..              ..++.++.+|++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~---~v~~~~r~~------~~~~~~~~--------------~~~~~~~~~D~~   58 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DH---IVYALGRNP------EHLAALAE--------------IEGVEPIESDIV   58 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TS---EEEEEESCH------HHHHHHHT--------------STTEEEEECCHH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CC---eEEEEeCCH------HHHHHHHh--------------hcCCcceecccc
Confidence            5789999999999999999999987 64   678888753      22222211              246888899987


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +........+..+.+.++|++||+||....       .+.+...+++|+.++.++.+++.+.  ....++|++|
T Consensus        59 ~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~is  132 (245)
T 3e9n_A           59 KEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYIN  132 (245)
T ss_dssp             HHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             hHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEc
Confidence            752100011122233579999999997542       4567778999999999998887542  1125788775

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.56  E-value=6.7e-14  Score=102.38  Aligned_cols=126  Identities=17%  Similarity=0.153  Sum_probs=81.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC-------CCCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK-------RGLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      +++++++||||+|+||++++++|++.|+   +|++.+|..       ......+...++...             ...  
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga---~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-------------~~~--   68 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGA---LVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-------------GGK--   68 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-------------TCE--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCcccccccCCHHHHHHHHHHHHhh-------------CCe--
Confidence            6789999999999999999999999996   667765421       111111111222110             111  


Q ss_pred             EEEcccCCCCCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         81 IIEGDILQANLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        81 ~~~~D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                       ..+|+++...... .+.+.+.+.++|++|||||....       .+.++..+++|+.+++++++++.+.   .+.++||
T Consensus        69 -~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV  147 (319)
T 1gz6_A           69 -AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRII  147 (319)
T ss_dssp             -EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             -EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence             2468877541000 11122234579999999996532       4567789999999999999988542   2457888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       148 ~vs  150 (319)
T 1gz6_A          148 MTA  150 (319)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            876

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.56  E-value=9.8e-15  Score=101.51  Aligned_cols=101  Identities=15%  Similarity=0.032  Sum_probs=79.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|+||++++++|+++|+   +|++.+|+..                                   +|++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~-----------------------------------~D~~   45 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHT---IVHVASRQTG-----------------------------------LDIS   45 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTE---EEEEESGGGT-----------------------------------CCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEecCCcc-----------------------------------cCCC
Confidence            5789999999999999999999999985   7787776421                                   6888


Q ss_pred             CCCCCCChhHHHHHh---ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ---EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKMK-KLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~---~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  152 (152)
                      +++      ++.+++   .++|++|||||...        ..+.++..+++|+.++.++++++.+.- ...++|++|
T Consensus        46 ~~~------~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~s  116 (223)
T 3uce_A           46 DEK------SVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTS  116 (223)
T ss_dssp             CHH------HHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             CHH------HHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEec
Confidence            854      455554   47899999999752        256778899999999999999997641 224788775

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.55  E-value=3.8e-14  Score=104.93  Aligned_cols=108  Identities=17%  Similarity=0.176  Sum_probs=81.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc-c
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD-I   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~   86 (152)
                      +++++++||||+|++|++++++|++.|+   .|++++|+...  ..  ...+..              ..++.++.+| +
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~--~~--~~~l~~--------------~~~v~~v~~D~l   61 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGH---HVRAQVHSLKG--LI--AEELQA--------------IPNVTLFQGPLL   61 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCSCS--HH--HHHHHT--------------STTEEEEESCCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECCCCh--hh--HHHHhh--------------cCCcEEEECCcc
Confidence            3467899999999999999999999986   57788887542  11  111111              1468889999 9


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCC-CcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKK-LVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~S  152 (152)
                      +|++      ++.++++++|+|||+++...        ...|..+ .++++++.+. + +++||++|
T Consensus        62 ~d~~------~l~~~~~~~d~Vi~~a~~~~--------~~~~~~~-~~l~~aa~~~-g~v~~~V~~S  112 (352)
T 1xgk_A           62 NNVP------LMDTLFEGAHLAFINTTSQA--------GDEIAIG-KDLADAAKRA-GTIQHYIYSS  112 (352)
T ss_dssp             TCHH------HHHHHHTTCSEEEECCCSTT--------SCHHHHH-HHHHHHHHHH-SCCSEEEEEE
T ss_pred             CCHH------HHHHHHhcCCEEEEcCCCCC--------cHHHHHH-HHHHHHHHHc-CCccEEEEeC
Confidence            8854      68889999999999987532        1335656 8999999887 5 88999986

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.53  E-value=4.5e-14  Score=102.78  Aligned_cols=105  Identities=19%  Similarity=0.325  Sum_probs=79.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC-CCCCH--HHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK-RGLTP--KARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++|+||||+|++|++++++|++.|+   .|++++|+. .....  .+.+..+.               ..++.++.+|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~l~~~~---------------~~~v~~v~~D~   65 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSH---PTFIYARPLTPDSTPSSVQLREEFR---------------SMGVTIIEGEM   65 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTC---CEEEEECCCCTTCCHHHHHHHHHHH---------------HTTCEEEECCT
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCC---cEEEEECCcccccChHHHHHHHHhh---------------cCCcEEEEecC
Confidence            57899999999999999999999986   678889875 32111  11222111               14688899999


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEe
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLD  150 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  150 (152)
                      +|++      ++.++++++|+|||+++...            +.++.++++++.+.+++++||+
T Consensus        66 ~d~~------~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~  111 (321)
T 3c1o_A           66 EEHE------KMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAAGNIKRFLP  111 (321)
T ss_dssp             TCHH------HHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCCEEEC
T ss_pred             CCHH------HHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHhCCccEEec
Confidence            9854      79999999999999998642            5567889999988722888874

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.52  E-value=4.3e-14  Score=102.06  Aligned_cols=99  Identities=24%  Similarity=0.149  Sum_probs=71.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+||||+||||++++++|+++||   .|++++|++..                           ..+   ..|.    
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~---~V~~l~R~~~~---------------------------~~~---~~~~----   43 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGH---EVTLVSRKPGP---------------------------GRI---TWDE----   43 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCT---------------------------TEE---EHHH----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCc---------------------------Cee---ecch----
Confidence            6799999999999999999999998   67888886541                           111   1121    


Q ss_pred             CCCChhHHHHHhccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhcC-CCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKMK-KLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  152 (152)
                            .....++++|+|||+|+..-       .......+++.|+.++.++++++...+ ...+||+.|
T Consensus        44 ------~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~S  107 (298)
T 4b4o_A           44 ------LAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVT  107 (298)
T ss_dssp             ------HHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEE
T ss_pred             ------hhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEe
Confidence                  12344578999999998431       133445688999999999999998863 223466654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.51  E-value=1.1e-13  Score=98.02  Aligned_cols=120  Identities=13%  Similarity=0.035  Sum_probs=77.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ||+++||||+|+||++++++|+++|+   +|++++|+...  .. .+.++...             ..++..+  |..+-
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~--~~-~~~~l~~~-------------~~~~~~~--d~~~v   59 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGH---TVACHDESFKQ--KD-ELEAFAET-------------YPQLKPM--SEQEP   59 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGS--HH-HHHHHHHH-------------CTTSEEC--CCCSH
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH--HH-HHHHHHhc-------------CCcEEEE--CHHHH
Confidence            36899999999999999999999996   78888886532  22 12111110             1223332  32221


Q ss_pred             CCCCChhHHHHHhccccEEEeccccc-c-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASL-K-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~-~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      ..  ..+++.+.+.++|++|||||.. .       ..+.++..+++|+.++.++++++.+.   .+.+++|++|
T Consensus        60 ~~--~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~is  131 (254)
T 1zmt_A           60 AE--LIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFIT  131 (254)
T ss_dssp             HH--HHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             HH--HHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence            00  0112223345899999999976 2       24567889999999999999988532   2346888876

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.47  E-value=6.7e-13  Score=104.69  Aligned_cols=121  Identities=17%  Similarity=0.123  Sum_probs=79.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC-------CCCCHHHHHHHHhcChhhhhhhhhccccCCcE
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK-------RGLTPKARLAEFSKLPVFERLRKECPAQLSRL   79 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (152)
                      .+++++++||||+|+||++++++|++.|+   +|++.+|..       ......+...++...             ...+
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga---~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~-------------~~~~   79 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAERGA---KVVVNDLGGTHSGDGASQRAADIVVDEIRKA-------------GGEA   79 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEC--------------CHHHHHHHHHHT-------------TCCE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcccccccCCHHHHHHHHHHHHHh-------------CCeE
Confidence            47899999999999999999999999996   778877621       112222222222211             1222


Q ss_pred             EEEEcccCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh---c
Q psy11862         80 HIIEGDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK---M  142 (152)
Q Consensus        80 ~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---~  142 (152)
                         .+|+++.+      ++.+++       .++|++|||||...       ..+.++.++++|+.+++++++++.+   .
T Consensus        80 ---~~D~~d~~------~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~  150 (613)
T 3oml_A           80 ---VADYNSVI------DGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKK  150 (613)
T ss_dssp             ---EECCCCGG------GHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ---EEEeCCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               36877754      344443       36899999999753       2567888999999999999999854   2


Q ss_pred             CCCcceEecC
Q psy11862        143 KKLVVSLDIG  152 (152)
Q Consensus       143 ~~~~~~v~~S  152 (152)
                      ++..+||++|
T Consensus       151 ~~~g~IV~is  160 (613)
T 3oml_A          151 QNYGRIIMTS  160 (613)
T ss_dssp             TTCEEEEEEC
T ss_pred             cCCCEEEEEC
Confidence            2457888876

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.46  E-value=2.3e-13  Score=95.76  Aligned_cols=117  Identities=15%  Similarity=0.049  Sum_probs=74.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-e--cCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-C--RAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +|+++||||+|+||++++++|+++|+   +|+++ +  |+..      .+.....     .+        ....+.  |.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~r~~~------~~~~~~~-----~~--------~~~~~~--~~   56 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY---TVVCHDASFADAA------ERQRFES-----EN--------PGTIAL--AE   56 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGSHH------HHHHHHH-----HS--------TTEEEC--CC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCcCCHH------HHHHHHH-----Hh--------CCCccc--CH
Confidence            47899999999999999999999986   67777 5  7532      2222111     00        011111  22


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc----------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL----------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      .+-..  ..+++.+.+.++|++|||||....          .+.++..+++|+.++.++++++.+.   .+.+++|++|
T Consensus        57 ~~v~~--~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~is  133 (244)
T 1zmo_A           57 QKPER--LVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFIT  133 (244)
T ss_dssp             CCGGG--HHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             HHHHH--HHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence            11110  011122223478999999996432          3567889999999999999988642   2457888876

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.45  E-value=2.1e-13  Score=97.73  Aligned_cols=97  Identities=12%  Similarity=-0.021  Sum_probs=72.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +|+|+|||+ |+||++++++|++.|+   .|++++|++..   .+.+.                  ..++.++.+|+.+.
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~---~V~~~~r~~~~---~~~~~------------------~~~~~~~~~D~~d~   59 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGW---RIIGTSRNPDQ---MEAIR------------------ASGAEPLLWPGEEP   59 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTC---EEEEEESCGGG---HHHHH------------------HTTEEEEESSSSCC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCC---EEEEEEcChhh---hhhHh------------------hCCCeEEEeccccc
Confidence            479999998 9999999999999987   78889986431   11111                  14688999999872


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                               .  +.++|+|||+|+.......          .+.++++++... .++++||++|
T Consensus        60 ---------~--~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~S  102 (286)
T 3ius_A           60 ---------S--LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLS  102 (286)
T ss_dssp             ---------C--CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEE
T ss_pred             ---------c--cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEee
Confidence                     1  5789999999997643221          246778888773 2678999986

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.45  E-value=3.5e-14  Score=105.40  Aligned_cols=92  Identities=20%  Similarity=0.218  Sum_probs=73.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+||||+|++|++++++|++.|+  ..|++++|+                                        .+  
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~--~~v~~~d~~----------------------------------------~d--   36 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTD--HHIFEVHRQ----------------------------------------TK--   36 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCC--CEEEECCTT----------------------------------------CC--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--CEEEEECCC----------------------------------------CC--
Confidence            5799999999999999999999985  245554431                                        33  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCc-ceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLV-VSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  152 (152)
                          .+++.++++++|+|||+||.... .++...+++|+.++.++++++++. +.+ +||++|
T Consensus        37 ----~~~l~~~~~~~d~Vih~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~S   93 (369)
T 3st7_A           37 ----EEELESALLKADFIVHLAGVNRP-EHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSS   93 (369)
T ss_dssp             ----HHHHHHHHHHCSEEEECCCSBCT-TCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEE
T ss_pred             ----HHHHHHHhccCCEEEECCcCCCC-CCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeC
Confidence                34688888899999999997653 445567889999999999999987 555 899886

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.44  E-value=5.2e-13  Score=108.00  Aligned_cols=120  Identities=18%  Similarity=0.272  Sum_probs=91.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHH-hhCCCCcEEEEeecCCCC-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAKRG-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~-~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++++||||+|+||.+++++|+ ++|.  +.|++++|+... ....+.++++...             +.++.++.+|+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga--~~vvl~~R~~~~~~~~~~~~~~l~~~-------------G~~v~~~~~Dv  593 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGV--RNLVLVSRRGPAASGAAELVAQLTAY-------------GAEVSLQACDV  593 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSC--CEEEEEESSGGGSTTHHHHHHHHHHT-------------TCEEEEEECCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCC--cEEEEeccCccchHHHHHHHHHHHhc-------------CCcEEEEEeec
Confidence            57899999999999999999999 6775  468888987432 3344444444322             36789999999


Q ss_pred             CCCCCCCChhHHHHHhc------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQE------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +|++      ++.++++      ++|++|||||....       .+.|+..+++|+.+++++.+++..  .. +||++|
T Consensus       594 sd~~------~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~--~l-~iV~~S  663 (795)
T 3slk_A          594 ADRE------TLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP--DV-ALVLFS  663 (795)
T ss_dssp             TCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT--TS-EEEEEE
T ss_pred             CCHH------HHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh--CC-EEEEEc
Confidence            9955      5666654      57999999997642       567888999999999999998843  33 777765

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.43  E-value=1.4e-12  Score=102.71  Aligned_cols=126  Identities=18%  Similarity=0.141  Sum_probs=81.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC-------CCCHHHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR-------GLTPKARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      +++++++||||+++||+++++.|+++|+   +|++.+|...       ...+.+..+++...             .... 
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga---~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~-------------g~~~-   68 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGA---KVVVNDLGGALNGQGGNSKAADVVVDEIVKN-------------GGVA-   68 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECC-----------CHHHHHHHHHHHT-------------TCEE-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCC---EEEEEeCCccccccccchHHHHHHHHHHHhc-------------CCeE-
Confidence            7889999999999999999999999996   6777766431       01122222222110             1222 


Q ss_pred             EEEcccCCCCCCCC-hhHHHHHhccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         81 IIEGDILQANLGIK-DSDLLMLQEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        81 ~~~~D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                        .+|+.|..-.-. .+.+.+.+.++|++|||||+..       ..+.|+.++++|+.+++.+.+++.+.   ++..++|
T Consensus        69 --~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IV  146 (604)
T 2et6_A           69 --VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIV  146 (604)
T ss_dssp             --EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             --EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence              246655431000 1223334568999999999753       25678889999999999999988642   2346888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       147 nis  149 (604)
T 2et6_A          147 NTS  149 (604)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            875

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.43  E-value=1.5e-12  Score=102.45  Aligned_cols=124  Identities=16%  Similarity=0.133  Sum_probs=86.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+++||+++++.|++.|+   +|++.+|+.    ..+...++...             ..++..+.+|+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga---~Vv~~~~~~----~~~~~~~i~~~-------------g~~~~~~~~Dv  378 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGA---KVVVNDFKD----ATKTVDEIKAA-------------GGEAWPDQHDV  378 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEECSSC----CHHHHHHHHHT-------------TCEEEEECCCH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCC---EEEEEeCcc----HHHHHHHHHhc-------------CCeEEEEEcCh
Confidence            36789999999999999999999999996   677776532    12222222111             24566778888


Q ss_pred             -CCCCCCCChhHHHHHhccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         87 -LQANLGIKDSDLLMLQEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        87 -~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                       .+.+.  ..+++.+.+.++|++|||||+..       ..+.|+.++++|+.+++.+.+++.+.   ++-.++|++|
T Consensus       379 ~~~~~~--~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnis  453 (604)
T 2et6_A          379 AKDSEA--IIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINIT  453 (604)
T ss_dssp             HHHHHH--HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             HHHHHH--HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence             44210  01223334568999999999753       25678889999999999999988642   2346888876

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.40  E-value=9e-13  Score=96.66  Aligned_cols=121  Identities=15%  Similarity=0.098  Sum_probs=79.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCC----CCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCP----DIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~----~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .++|+||||+|++|++++..|+..|+    ....|+++++.+.    .+......     .++..      ..+.++ +|
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~----~~~~~g~~-----~dl~~------~~~~~~-~d   67 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA----MKALEGVV-----MELED------CAFPLL-AG   67 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG----HHHHHHHH-----HHHHT------TTCTTE-EE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc----hhhccchh-----hhhhc------cccccc-CC
Confidence            36899999999999999999999874    1236788876421    11111000     01110      011112 46


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCc-ceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLV-VSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  152 (152)
                      +.+..      ++...++++|+|||+||.... ..+..++++.|+.++.++++++.+.++++ +++++|
T Consensus        68 i~~~~------~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~s  130 (327)
T 1y7t_A           68 LEATD------DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (327)
T ss_dssp             EEEES------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             eEecc------ChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            65533      367778899999999997653 35567799999999999999999863133 666554

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.35  E-value=1e-11  Score=104.27  Aligned_cols=125  Identities=17%  Similarity=0.122  Sum_probs=85.9

Q ss_pred             cCCceEEEcCCcch-hHHHHHHHHHhhCCCCcEEEEe-ecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTGF-MGKVLLEKLLRSCPDIGKVYIL-CRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G~-iG~~l~~~l~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+|+ ||.++++.|++.|+   +|++. .|+...  +.+..+++..         .......++.++.+|
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA---~VVL~~~R~~e~--lee~a~eL~a---------el~a~Ga~V~vV~~D  539 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGA---KVVVTTSRFSKQ--VTDYYQSIYA---------KYGAKGSTLIVVPFN  539 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTC---EEEEEESSCSTT--TTTHHHHTTT---------TTCCTTCEEEEEECC
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcC---EEEEEeCCCHHH--HHHHHHHHHH---------HhhcCCCeEEEEEeC
Confidence            67899999999998 99999999999986   66666 454321  1222222211         111113578899999


Q ss_pred             cCCCCCCCChhHHHHHh------------c-cccEEEeccccccc----------hhhHHHHHHhhhHHHHHHHHHHHh-
Q psy11862         86 ILQANLGIKDSDLLMLQ------------E-EVSVVFNGAASLKL----------EAELKENVAANTRGTQRLLDIALK-  141 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~------------~-~~d~vi~~a~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~-  141 (152)
                      +++++      ++.+++            . ++|++|||||....          .+.+..++++|+.++..+++++.. 
T Consensus       540 VTD~e------sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~l  613 (1688)
T 2pff_A          540 QGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSA  613 (1688)
T ss_dssp             SSSTT------HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             CCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99976      444443            2 58999999996421          356778999999999999998732 


Q ss_pred             -c---CCCcceEecC
Q psy11862        142 -M---KKLVVSLDIG  152 (152)
Q Consensus       142 -~---~~~~~~v~~S  152 (152)
                       .   .+..+||++|
T Consensus       614 p~M~krggGrIVnIS  628 (1688)
T 2pff_A          614 RGIETRPAQVILPMS  628 (1688)
T ss_dssp             HTCTTSCEEECCCCC
T ss_pred             hHHHhCCCCEEEEEE
Confidence             1   1125788776

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.32  E-value=9.4e-13  Score=96.58  Aligned_cols=138  Identities=7%  Similarity=0.001  Sum_probs=82.6

Q ss_pred             CCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          9 AGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         9 ~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ++|+++|||+++  +||.+++++|++.|+   +|++.+|++.. .+..+-.+  ..................+.++.+|+
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~---~Vv~~~~~~~~-~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv   74 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNV---KIIFGIWPPVY-NIFMKNYK--NGKFDNDMIIDKDKKMNILDMLPFDA   74 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEECHHHH-HHHHHHHH--TTTTTGGGBCSSSCBCCEEEEEECCT
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCC---EEEEEecCccc-cccccchH--HHHHHHHHHHhhcccccccccccccc
Confidence            468999999875  999999999999996   66755543200 00000000  00000000000111234578889999


Q ss_pred             CCCCCC-CChh-------------HHH-------HHhccccEEEecccccc---------chhhHHHHHHhhhHHHHHHH
Q psy11862         87 LQANLG-IKDS-------------DLL-------MLQEEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLL  136 (152)
Q Consensus        87 ~~~~~~-~~~~-------------~~~-------~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~  136 (152)
                      ++.... ...+             ++.       +.+.++|++|||||+..         ..+.+..++++|+.+++.+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  154 (329)
T 3lt0_A           75 SFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLC  154 (329)
T ss_dssp             TCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            876211 0011             232       23347899999999631         25668889999999999999


Q ss_pred             HHHHhcC-CCcceEecC
Q psy11862        137 DIALKMK-KLVVSLDIG  152 (152)
Q Consensus       137 ~~~~~~~-~~~~~v~~S  152 (152)
                      +++.+.- .-.++|++|
T Consensus       155 ~~~~p~m~~~g~Iv~is  171 (329)
T 3lt0_A          155 KYFVNIMKPQSSIISLT  171 (329)
T ss_dssp             HHHGGGEEEEEEEEEEE
T ss_pred             HHHHHHHhhCCeEEEEe
Confidence            9987631 115777764

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.30  E-value=2.4e-11  Score=104.07  Aligned_cols=126  Identities=17%  Similarity=0.149  Sum_probs=85.1

Q ss_pred             cCCceEEEcCCcch-hHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGF-MGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~-iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++++++||||+|+ ||.++++.|++.|+   +|++.+++.. ....+..+++.         ......+.++.++.+|+
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA---~VVl~~~R~~-~~l~~~a~eL~---------~el~~~G~~v~~v~~DV  716 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGA---KVIVTTSRFS-RQVTEYYQGIY---------ARCGARGSQLVVVPFNQ  716 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTC---EEEEEESSCC-HHHHHHHHHHH---------HHHCCTTCEEEEEECCT
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCCh-HHHHHHHHHHH---------HHhhccCCeEEEEEcCC
Confidence            67899999999999 99999999999986   6777754322 11111112211         11111135788999999


Q ss_pred             CCCCCCCChhHHHHHh----------c-cccEEEeccccccc----------hhhHHHHHHhhhHHHHHHHHHHH--h-c
Q psy11862         87 LQANLGIKDSDLLMLQ----------E-EVSVVFNGAASLKL----------EAELKENVAANTRGTQRLLDIAL--K-M  142 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~----------~-~~d~vi~~a~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~--~-~  142 (152)
                      ++++      ++.+++          . ++|++|||||+...          .+.+..++++|+.+++.+++++.  . +
T Consensus       717 sd~e------sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M  790 (1878)
T 2uv9_A          717 GSKQ------DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGY  790 (1878)
T ss_dssp             TCHH------HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             CCHH------HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            9964      454443          2 58999999996532          35678899999999999887742  2 1


Q ss_pred             --CCCcceEecC
Q psy11862        143 --KKLVVSLDIG  152 (152)
Q Consensus       143 --~~~~~~v~~S  152 (152)
                        .+..+||++|
T Consensus       791 ~~~~~G~IVnIS  802 (1878)
T 2uv9_A          791 ETRPAQVILPLS  802 (1878)
T ss_dssp             CSCCEEECCEEC
T ss_pred             HhCCCCEEEEEc
Confidence              1225788775

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.30  E-value=2.9e-11  Score=103.72  Aligned_cols=125  Identities=17%  Similarity=0.131  Sum_probs=85.8

Q ss_pred             cCCceEEEcCCcch-hHHHHHHHHHhhCCCCcEEEEee-cCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTGF-MGKVLLEKLLRSCPDIGKVYILC-RAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G~-iG~~l~~~l~~~g~~~~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+++ ||.++++.|++.|+   +|++.+ |+..  ...+..+++.         ........++.++.+|
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA---~Vvl~~~R~~~--~l~~~~~eL~---------~~~~~~g~~v~~v~~D  738 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGA---KVVVTTSRFSK--QVTDYYQSIY---------AKYGAKGSTLIVVPFN  738 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTC---EEEEEESSCCH--HHHHHHHHHH---------HHHCCTTCEEEEEECC
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCCHH--HHHHHHHHHH---------HHhhcCCCeEEEEEec
Confidence            67899999999998 99999999999986   667764 4322  1122122221         1111113578899999


Q ss_pred             cCCCCCCCChhHHHHHh------------c-cccEEEeccccccc----------hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         86 ILQANLGIKDSDLLMLQ------------E-EVSVVFNGAASLKL----------EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~------------~-~~d~vi~~a~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      +++++      ++..++            . ++|++|||||....          .+.+..++++|+.+++.+++++...
T Consensus       739 Vsd~~------sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~l  812 (1887)
T 2uv8_A          739 QGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSA  812 (1887)
T ss_dssp             TTCHH------HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             CCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99964      444433            2 58999999996531          3557789999999999999987432


Q ss_pred             C-----CCcceEecC
Q psy11862        143 K-----KLVVSLDIG  152 (152)
Q Consensus       143 ~-----~~~~~v~~S  152 (152)
                      +     +..+||++|
T Consensus       813 p~m~~~~~G~IVnIS  827 (1887)
T 2uv8_A          813 RGIETRPAQVILPMS  827 (1887)
T ss_dssp             TTCCSCCEEEEEEEC
T ss_pred             hhhhhCCCCEEEEEc
Confidence            1     125788875

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.28  E-value=1.8e-11  Score=89.35  Aligned_cols=139  Identities=12%  Similarity=0.059  Sum_probs=75.8

Q ss_pred             cCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCC---------CCCCHHHHHHHHhcC---hhhhhhhhhcc
Q psy11862          8 YAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAK---------RGLTPKARLAEFSKL---PVFERLRKECP   73 (152)
Q Consensus         8 ~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~---------~~~~~~~~~~~~~~~---~~~~~~~~~~~   73 (152)
                      +++++++||||  +++||++++++|++.|+   +|++.+|++         ....+ +....+...   ...+.+.....
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   82 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGA---RVLVGTWPPVYSIFKKGLESSRF-EQDSFYAQEPSSKVAAEAAEKPV   82 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTC---EEEEEECHHHHHHHHC-------------------------------
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCC---EEEEEeccccccchhhhhhhhhh-hhhhhhhcchhhhHHHHhhhccc
Confidence            67899999999  89999999999999986   677777531         00000 000000000   00000000000


Q ss_pred             ccCCcEEEEEcc------------cCC--------CCCCCC--hhHHHHHhccccEEEecccccc---------chhhHH
Q psy11862         74 AQLSRLHIIEGD------------ILQ--------ANLGIK--DSDLLMLQEEVSVVFNGAASLK---------LEAELK  122 (152)
Q Consensus        74 ~~~~~~~~~~~D------------~~~--------~~~~~~--~~~~~~~~~~~d~vi~~a~~~~---------~~~~~~  122 (152)
                       ......++.+|            +++        ++. +.  .+++.+.+.++|++|||||...         ..+.|+
T Consensus        83 -~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~-v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~  160 (319)
T 2ptg_A           83 -DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFT-ISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYL  160 (319)
T ss_dssp             ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCS-HHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHH
T ss_pred             -cccccccccccccccccccccchhcccccccccCHHH-HHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHH
Confidence             00002333333            332        110 00  1112223347999999998531         246678


Q ss_pred             HHHHhhhHHHHHHHHHHHhcC-CCcceEecC
Q psy11862        123 ENVAANTRGTQRLLDIALKMK-KLVVSLDIG  152 (152)
Q Consensus       123 ~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  152 (152)
                      ..+++|+.+++++++++.+.- ..+++|++|
T Consensus       161 ~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~is  191 (319)
T 2ptg_A          161 AAVSSSSYSFVSLLQHFLPLMKEGGSALALS  191 (319)
T ss_dssp             HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             HHHhHhhHHHHHHHHHHHHHHhcCceEEEEe
Confidence            899999999999999997641 125777764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.26  E-value=9.3e-11  Score=87.61  Aligned_cols=130  Identities=15%  Similarity=0.076  Sum_probs=82.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHh-hCCCCcEEEEeecCCCCCCH---------HHHHHHHhcChhhhhhhhhccccCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLR-SCPDIGKVYILCRAKRGLTP---------KARLAEFSKLPVFERLRKECPAQLS   77 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~-~g~~~~~v~~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~   77 (152)
                      ..+|+++||||+++||.++++.|++ .|.   +|++.+|+......         .+.+.+..            ...+.
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA---~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~------------~~~G~  109 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGA---DTLGVFFERPGEEGKPGTSGWYNSAAFHKFA------------AQKGL  109 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCBTTBCCCHHHHHHHHHHHHH------------HHTTC
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCC---EEEEEeCCchhhhhhcccccchhHHHHHHHH------------HhcCC
Confidence            3578999999999999999999999 985   67777776543210         11111110            01135


Q ss_pred             cEEEEEcccCCCCCCCC-hhHHHHHhccccEEEeccccc---------------------------------------c-
Q psy11862         78 RLHIIEGDILQANLGIK-DSDLLMLQEEVSVVFNGAASL---------------------------------------K-  116 (152)
Q Consensus        78 ~~~~~~~D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~---------------------------------------~-  116 (152)
                      .+..+.+|+++++.--. .+.+.+.+.++|++|||||..                                       . 
T Consensus       110 ~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~  189 (405)
T 3zu3_A          110 YAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQP  189 (405)
T ss_dssp             CEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECC
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCC
Confidence            67889999998651000 111223334789999999863                                       0 


Q ss_pred             -chhhHHHHHHhhhHHHH-HHHHHHHhcC---CCcceEecC
Q psy11862        117 -LEAELKENVAANTRGTQ-RLLDIALKMK---KLVVSLDIG  152 (152)
Q Consensus       117 -~~~~~~~~~~~n~~~~~-~l~~~~~~~~---~~~~~v~~S  152 (152)
                       ..+.|+.++++|..+.+ .+++++....   .-.++|.+|
T Consensus       190 ~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniS  230 (405)
T 3zu3_A          190 ATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFT  230 (405)
T ss_dssp             CCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEe
Confidence             24567788899988887 6666654321   124677654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.26  E-value=2.6e-11  Score=107.37  Aligned_cols=123  Identities=18%  Similarity=0.153  Sum_probs=84.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-HHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-PKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .+++++||||+|+||.++++.|+++|.  +.|++.+|+..... ..+.+.++...             +.++.++.+|++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l~~~-------------g~~v~~~~~Dvs 1947 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGA--QKLVLTSRSGIRTGYQARQVREWRRQ-------------GVQVLVSTSNAS 1947 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCSHHHHHHHHHHHHT-------------TCEEEEECCCSS
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCC--CEEEEEeCCCcchHHHHHHHHHHHhC-------------CCEEEEEecCCC
Confidence            678999999999999999999999986  35778888754321 12222222211             357888999999


Q ss_pred             CCCCCCChhHHHHHh------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      +++      ++.+++      .++|++|||||...       ..+.|+..+++|+.+++++.+++... ...++||++|
T Consensus      1948 d~~------~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iS 2020 (2512)
T 2vz8_A         1948 SLD------GARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFS 2020 (2512)
T ss_dssp             SHH------HHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred             CHH------HHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEec
Confidence            965      444433      46899999999753       14567778999999999999888653 2346888876

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.25  E-value=1.3e-11  Score=89.94  Aligned_cols=133  Identities=13%  Similarity=0.044  Sum_probs=77.2

Q ss_pred             cCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH-----HHHHHHHhcChhhhhhhhhccccCCcEE
Q psy11862          8 YAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP-----KARLAEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         8 ~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      +++++++||||  +|+||++++++|++.|+   +|++.+|++.....     .+.+.+..      .+..  ........
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~   75 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGA---RVALGTWPPVLGLFQKSLQSGRLDEDR------KLPD--GSLIEFAG   75 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTC---EEEEEECHHHHHHHHHHHHHTTTHHHH------BCTT--SCBCCCSC
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCC---EEEEEecccccchhhhhhhhhhhhhhh------hhhc--cccccccc
Confidence            67899999999  89999999999999986   67777764200000     00001100      0000  00000012


Q ss_pred             EEEcc------------cCC--------CCCCCC--hhHHHHHhccccEEEecccccc---------chhhHHHHHHhhh
Q psy11862         81 IIEGD------------ILQ--------ANLGIK--DSDLLMLQEEVSVVFNGAASLK---------LEAELKENVAANT  129 (152)
Q Consensus        81 ~~~~D------------~~~--------~~~~~~--~~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~  129 (152)
                      ++.+|            +++        ++. +.  .+++.+.+.++|++|||||...         ..+.|...+++|+
T Consensus        76 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~-v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~  154 (315)
T 2o2s_A           76 VYPLDAAFDKPEDVPQDIKDNKRYAGVDGYT-IKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSA  154 (315)
T ss_dssp             EEECCTTCSSTTSSCHHHHTCGGGSSCCCCS-HHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred             cccccccccccchhhhhhhcccccccCCHHH-HHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhh
Confidence            33333            332        110 00  1112222347999999998541         1466788999999


Q ss_pred             HHHHHHHHHHHhc-CCCcceEecC
Q psy11862        130 RGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus       130 ~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      .+++++++++.+. ...+++|++|
T Consensus       155 ~g~~~l~~~~~~~m~~~g~Iv~is  178 (315)
T 2o2s_A          155 YSFVSLLQHFGPIMNEGGSAVTLS  178 (315)
T ss_dssp             HHHHHHHHHHSTTEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhcCCEEEEEe
Confidence            9999999998763 1125777764

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.24  E-value=7.5e-11  Score=88.72  Aligned_cols=128  Identities=14%  Similarity=0.027  Sum_probs=82.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHh-hCCCCcEEEEeecCCCCCCH---------HHHH-HHHhcChhhhhhhhhccccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLR-SCPDIGKVYILCRAKRGLTP---------KARL-AEFSKLPVFERLRKECPAQLS   77 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~-~g~~~~~v~~~~r~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~   77 (152)
                      .+|+++||||+++||.++++.|++ .|.   +|++.+|+......         .+.+ +.+..             .+.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA---~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~-------------~G~  123 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGA---DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA-------------AGL  123 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-------------TTC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCC---EEEEEeCCchhhhhhhcccccchhHHHHHHHHh-------------cCC
Confidence            478999999999999999999999 985   77778876543211         0111 11111             135


Q ss_pred             cEEEEEcccCCCCCCCC-hhHHHHHh-ccccEEEeccccc----------------------------------------
Q psy11862         78 RLHIIEGDILQANLGIK-DSDLLMLQ-EEVSVVFNGAASL----------------------------------------  115 (152)
Q Consensus        78 ~~~~~~~D~~~~~~~~~-~~~~~~~~-~~~d~vi~~a~~~----------------------------------------  115 (152)
                      ....+.+|+++++.-.. .+.+.+.+ .++|++|||||..                                        
T Consensus       124 ~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~  203 (422)
T 3s8m_A          124 YSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIE  203 (422)
T ss_dssp             CEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEEC
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccC
Confidence            67889999999651000 12233445 6789999999862                                        


Q ss_pred             -cchhhHHHHHHhhhHHHH-HHHHHHHhcC---CCcceEecC
Q psy11862        116 -KLEAELKENVAANTRGTQ-RLLDIALKMK---KLVVSLDIG  152 (152)
Q Consensus       116 -~~~~~~~~~~~~n~~~~~-~l~~~~~~~~---~~~~~v~~S  152 (152)
                       -..+.|+..+++|..+.+ .+++++....   +-.++|++|
T Consensus       204 ~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniS  245 (422)
T 3s8m_A          204 PASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFS  245 (422)
T ss_dssp             CCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred             CCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEe
Confidence             024566777888877776 6666665421   124677654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.23  E-value=5.9e-11  Score=85.66  Aligned_cols=138  Identities=9%  Similarity=0.011  Sum_probs=76.9

Q ss_pred             cCCceEEEcCCc--chhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGT--GFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~--G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++++++||||+  |+||++++++|++.|+   +|++.+|++......+....-..... +.+..  .........+.+|
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~   79 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA---EILVGTWVPALNIFETSLRRGKFDQS-RVLPD--GSLMEIKKVYPLD   79 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT--SSBCCEEEEEEEC
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCC---eEEEeeccccchhhhhhhhhhHhhhh-hhhcc--ccccccccccccc
Confidence            678999999999  9999999999999986   67777753100000000000000000 00000  0000112233333


Q ss_pred             ------------cCC--------CCCCCC--hhHHHHHhccccEEEecccccc---------chhhHHHHHHhhhHHHHH
Q psy11862         86 ------------ILQ--------ANLGIK--DSDLLMLQEEVSVVFNGAASLK---------LEAELKENVAANTRGTQR  134 (152)
Q Consensus        86 ------------~~~--------~~~~~~--~~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~  134 (152)
                                  +++        ++. +.  .+++.+.+.++|++|||||...         ..+.++..+++|+.++++
T Consensus        80 ~~~~~~~dv~~Dv~~~~~~~~~~~~~-v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~  158 (297)
T 1d7o_A           80 AVFDNPEDVPEDVKANKRYAGSSNWT-VQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVS  158 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCS-HHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             eeccchhhhhhhhhccccccccCHHH-HHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHH
Confidence                        222        221 00  1112223347999999998531         246678899999999999


Q ss_pred             HHHHHHhc-CCCcceEecC
Q psy11862        135 LLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus       135 l~~~~~~~-~~~~~~v~~S  152 (152)
                      +++++.+. ...+++|++|
T Consensus       159 l~~~~~~~m~~~g~iv~is  177 (297)
T 1d7o_A          159 LLSHFLPIMNPGGASISLT  177 (297)
T ss_dssp             HHHHHGGGEEEEEEEEEEE
T ss_pred             HHHHHHHHhccCceEEEEe
Confidence            99999764 1125777764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.15  E-value=5.1e-10  Score=84.44  Aligned_cols=87  Identities=10%  Similarity=0.032  Sum_probs=60.9

Q ss_pred             cCCceEEEcCCcchhHHH--HHHHHHhhCCCCcEEEEeecCCCCCC--H-------HHHHHHHhcChhhhhhhhhccccC
Q psy11862          8 YAGRSVLVTGGTGFMGKV--LLEKLLRSCPDIGKVYILCRAKRGLT--P-------KARLAEFSKLPVFERLRKECPAQL   76 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~--l~~~l~~~g~~~~~v~~~~r~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~   76 (152)
                      ..+|+++||||+++||.+  +++++.+.|+   .|++++|+.....  .       .+.+.+...            ..+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga---~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------------~~g  122 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEA---HTIGVSYETGATDRRIGTAGWYNNIFFKEFAK------------KKG  122 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCC---EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH------------HTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCC---EEEEEecCcchhhhcccccccchHHHHHHHHH------------HcC
Confidence            568999999999999999  9999999885   7788888654321  0       122222211            113


Q ss_pred             CcEEEEEcccCCCCCCCChhHHHHH-------hccccEEEeccccc
Q psy11862         77 SRLHIIEGDILQANLGIKDSDLLML-------QEEVSVVFNGAASL  115 (152)
Q Consensus        77 ~~~~~~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~  115 (152)
                      ..+..+.+|+++++      ++.++       +.++|++|||||..
T Consensus       123 ~~~~~~~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          123 LVAKNFIEDAFSNE------TKDKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             CCEEEEESCTTCHH------HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             CcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCccc
Confidence            57889999999964      34333       34789999999863

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.07  E-value=2.7e-09  Score=66.29  Aligned_cols=76  Identities=18%  Similarity=0.132  Sum_probs=56.9

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++++|+|+ |++|.++++.|.+.|.  ..|++++|++      +++..+.               ...+.++.+|+.+
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~--~~v~~~~r~~------~~~~~~~---------------~~~~~~~~~d~~~   59 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSN--YSVTVADHDL------AALAVLN---------------RMGVATKQVDAKD   59 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSS--EEEEEEESCH------HHHHHHH---------------TTTCEEEECCTTC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCH------HHHHHHH---------------hCCCcEEEecCCC
Confidence            3578999999 9999999999999871  2678888753      2222221               1356678889887


Q ss_pred             CCCCCChhHHHHHhccccEEEecccc
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAAS  114 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~  114 (152)
                      .+      ++.+.++++|+|||+++.
T Consensus        60 ~~------~~~~~~~~~d~vi~~~~~   79 (118)
T 3ic5_A           60 EA------GLAKALGGFDAVISAAPF   79 (118)
T ss_dssp             HH------HHHHHTTTCSEEEECSCG
T ss_pred             HH------HHHHHHcCCCEEEECCCc
Confidence            43      688888999999999863

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.95  E-value=6.9e-09  Score=92.91  Aligned_cols=116  Identities=14%  Similarity=0.097  Sum_probs=78.5

Q ss_pred             ccCCceEEEcCCcch-hHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTGF-MGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~-iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .+++|+++||||+++ ||.++++.|++.|.   +|++.+|+... ...+.++++.         .+....+.++..+.+|
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA---~Vvi~~r~~~~-~~~~~~~~l~---------~~l~~~G~~~~~v~~D 2199 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGA---TVIATTSRLDD-DRLAFYKQLY---------RDHARFDATLWVVPAN 2199 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTC---EEEEEESCCSH-HHHHHHHHHH---------HHHCCTTCEEEEEECC
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCC---EEEEEeCChhh-hhhHHHHHHH---------HHHhhcCCeEEEEEec
Confidence            378999999999999 99999999999995   77888876441 0111122111         1111123578889999


Q ss_pred             cCCCCCCCChhHHHHHh-----------ccccEEEeccccc----c--------chh----hHHHHHHhhhHHHHHHHHH
Q psy11862         86 ILQANLGIKDSDLLMLQ-----------EEVSVVFNGAASL----K--------LEA----ELKENVAANTRGTQRLLDI  138 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-----------~~~d~vi~~a~~~----~--------~~~----~~~~~~~~n~~~~~~l~~~  138 (152)
                      +++++      ++.+++           .++|++|||||..    .        ...    .++..+++|+.+++.+++.
T Consensus      2200 vtd~~------~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~ 2273 (3089)
T 3zen_D         2200 MASYS------DIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISG 2273 (3089)
T ss_dssp             TTCHH------HHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHH
T ss_pred             CCCHH------HHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99965      444432           3589999999971    1        012    2334588999999988887


Q ss_pred             HHh
Q psy11862        139 ALK  141 (152)
Q Consensus       139 ~~~  141 (152)
                      +..
T Consensus      2274 ~~~ 2276 (3089)
T 3zen_D         2274 LSK 2276 (3089)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.92  E-value=1e-09  Score=78.94  Aligned_cols=82  Identities=17%  Similarity=0.197  Sum_probs=58.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++||||+|++|++++..|++.|+   .|++.+|+..  ...+..+++..         .     .++.++.+|++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~---~V~i~~R~~~--~~~~l~~~~~~---------~-----~~~~~~~~D~~  177 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA---EVVLCGRKLD--KAQAAADSVNK---------R-----FKVNVTAAETA  177 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSHH--HHHHHHHHHHH---------H-----HTCCCEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEECCHH--HHHHHHHHHHh---------c-----CCcEEEEecCC
Confidence            5789999999999999999999999985   5788888532  11111111100         0     13455678988


Q ss_pred             CCCCCCChhHHHHHhccccEEEecccc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAAS  114 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~  114 (152)
                      +++      ++.+.++.+|++||+++.
T Consensus       178 ~~~------~~~~~~~~~DvlVn~ag~  198 (287)
T 1lu9_A          178 DDA------SRAEAVKGAHFVFTAGAI  198 (287)
T ss_dssp             SHH------HHHHHTTTCSEEEECCCT
T ss_pred             CHH------HHHHHHHhCCEEEECCCc
Confidence            743      688888899999999974

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.89  E-value=8.2e-09  Score=75.72  Aligned_cols=124  Identities=15%  Similarity=0.050  Sum_probs=78.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCC----CCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCP----DIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~----~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      +.++|+||||+|++|++++..|+..|.    ....|.++++...  ...+++....     .++...    ...+   ..
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~--~~~~~~~g~~-----~dl~~~----~~~~---~~   69 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNE--KAQKALQGVM-----MEIDDC----AFPL---LA   69 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCH--HHHHHHHHHH-----HHHHTT----TCTT---EE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCc--cccccchhhH-----HHHhhh----cccc---cC
Confidence            347999999999999999999988763    1136777776310  0011111100     011110    0011   12


Q ss_pred             ccCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCC-cceEecC
Q psy11862         85 DILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKL-VVSLDIG  152 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~S  152 (152)
                      |+....      ++...++++|+|||+||.... ..+..+++..|+..+.++++.+.+..+. .+|+++|
T Consensus        70 ~i~~~~------~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S  133 (329)
T 1b8p_A           70 GMTAHA------DPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG  133 (329)
T ss_dssp             EEEEES------SHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cEEEec------CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence            443322      367788999999999997653 3455678899999999999999987323 3777775

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.79  E-value=5.7e-08  Score=71.13  Aligned_cols=116  Identities=12%  Similarity=0.053  Sum_probs=75.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +.++|+||||+|++|..++..|+..|. +..|.++++++.    .....++...         .  ....+..    +..
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~----~~~~~dL~~~---------~--~~~~v~~----~~~   66 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA----PGVTADISHM---------D--TGAVVRG----FLG   66 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH----HHHHHHHHTS---------C--SSCEEEE----EES
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc----HhHHHHhhcc---------c--ccceEEE----EeC
Confidence            457999999999999999999988762 346777776432    1111111110         0  0012222    111


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                            ..++...++++|+|||++|.... ..+..++...|+..+..+++.+.+. +++.+|++
T Consensus        67 ------t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv  123 (326)
T 1smk_A           67 ------QQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNL  123 (326)
T ss_dssp             ------HHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred             ------CCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEE
Confidence                  12477788999999999997643 2334567899999999999999987 45555443

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.77  E-value=1.3e-07  Score=68.91  Aligned_cols=119  Identities=13%  Similarity=0.122  Sum_probs=73.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++|+||||+|++|++++..|+..|. ...+.++++.+.    .+++....     .++....+....++.+...+  +  
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~----~~~~~~~~-----~dl~~~~~~~~~~~~i~~~~--d--   66 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHS----INKLEGLR-----EDIYDALAGTRSDANIYVES--D--   66 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGG----HHHHHHHH-----HHHHHHHTTSCCCCEEEEEE--T--
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCc----hhhhHHHH-----HHHHHhHHhcCCCeEEEeCC--c--
Confidence            4899999999999999999988764 346777776211    11111100     00111001111222222211  1  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                            ++.+.++++|+|||+||.... ..+..+++..|+..+.++++++.+..  +.++++
T Consensus        67 ------~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv  120 (313)
T 1hye_A           67 ------ENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFV  120 (313)
T ss_dssp             ------TCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEE
T ss_pred             ------chHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEE
Confidence                  134457899999999997643 34456689999999999999999984  544443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.71  E-value=1.6e-07  Score=71.67  Aligned_cols=108  Identities=20%  Similarity=0.201  Sum_probs=69.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++++|+| +|++|+++++.|++.|+   .|.+.+|+.      ++.+.+..             ....+..+.+|+.
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~---~V~v~~R~~------~~a~~la~-------------~~~~~~~~~~Dv~   57 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGI---KVTVACRTL------ESAKKLSA-------------GVQHSTPISLDVN   57 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTC---EEEEEESSH------HHHHHTTT-------------TCTTEEEEECCTT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcC---EEEEEECCH------HHHHHHHH-------------hcCCceEEEeecC
Confidence            4578999998 89999999999998875   677788752      22222211             0124667888998


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHh--h-------hHHHHHHHHHHHhcCCC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAA--N-------TRGTQRLLDIALKMKKL  145 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~--n-------~~~~~~l~~~~~~~~~~  145 (152)
                      +.+      ++.++++++|+|||+++......-....++.  +       ...+..+++++++. ++
T Consensus        58 d~~------~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv  117 (450)
T 1ff9_A           58 DDA------ALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GI  117 (450)
T ss_dssp             CHH------HHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TC
T ss_pred             CHH------HHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CC
Confidence            743      6778888999999999864322111122221  2       23567788888876 44

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.70  E-value=8.8e-08  Score=66.69  Aligned_cols=80  Identities=21%  Similarity=0.238  Sum_probs=53.2

Q ss_pred             CCceEEEcCC----------------cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhc
Q psy11862          9 AGRSVLVTGG----------------TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC   72 (152)
Q Consensus         9 ~~~~ilItG~----------------~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (152)
                      +|++++||||                +|++|.+++++++++|+   .|.++.|......                     
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga---~V~lv~~~~~~~~---------------------   57 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGY---EVCLITTKRALKP---------------------   57 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTC---EEEEEECTTSCCC---------------------
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCC---EEEEEeCCccccc---------------------
Confidence            5899999999                89999999999999996   6778887543110                     


Q ss_pred             cccCCcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccccccc
Q psy11862         73 PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL  117 (152)
Q Consensus        73 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~  117 (152)
                       ..+..+..+..+-.+..    .+.+...+.++|++||+||..++
T Consensus        58 -~~~~~~~~~~v~s~~em----~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           58 -EPHPNLSIREITNTKDL----LIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             -CCCTTEEEEECCSHHHH----HHHHHHHGGGCSEEEECSBCCSE
T ss_pred             -cCCCCeEEEEHhHHHHH----HHHHHHhcCCCCEEEEcCccccc
Confidence             00124444433321111    12344556689999999998764

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.68  E-value=5.6e-07  Score=65.24  Aligned_cols=116  Identities=10%  Similarity=-0.046  Sum_probs=73.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++|+||||+|++|.+++..|+..+. ...+.++++.+.    .++++...     .++..... ...++.+...|     
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~----~~~~~~~~-----~dl~~~~~-~~~~~~v~~~~-----   64 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDK----EDDTVGQA-----ADTNHGIA-YDSNTRVRQGG-----   64 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGG----HHHHHHHH-----HHHHHHHT-TTCCCEEEECC-----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCC----hhhHHHHH-----HHHHHHHh-hCCCcEEEeCC-----
Confidence            5899999999999999999988764 346777776111    11221110     11111111 11233333221     


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                              .+.++++|+|||+||.... .....+++..|+..+..+++.+.+. +++.++++
T Consensus        65 --------~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv  117 (303)
T 1o6z_A           65 --------YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLT  117 (303)
T ss_dssp             --------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEE
T ss_pred             --------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE
Confidence                    1235789999999997643 3445568899999999999999987 45555544

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.63  E-value=1.8e-07  Score=64.99  Aligned_cols=78  Identities=14%  Similarity=0.148  Sum_probs=52.4

Q ss_pred             cCCceEEEcCC----------------cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862          8 YAGRSVLVTGG----------------TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE   71 (152)
Q Consensus         8 ~~~~~ilItG~----------------~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (152)
                      +++++++||||                +|++|.++++++++.|+   .|+++.++.... .                   
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga---~V~l~~~~~~l~-~-------------------   62 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA---NVTLVSGPVSLP-T-------------------   62 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC---EEEEEECSCCCC-C-------------------
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCC---EEEEEECCcccc-c-------------------
Confidence            78999999999                69999999999999996   666666643211 0                   


Q ss_pred             ccccCCcEEEEEcccCCCCCCCChhHHHHHhccccEEEecccccc
Q psy11862         72 CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLK  116 (152)
Q Consensus        72 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~  116 (152)
                          ...+.  ..|+.+..-  -.+.+.+.+.++|++||+||..+
T Consensus        63 ----~~g~~--~~dv~~~~~--~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           63 ----PPFVK--RVDVMTALE--MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             ----CTTEE--EEECCSHHH--HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             ----CCCCe--EEccCcHHH--HHHHHHHhcCCCCEEEECCcccC
Confidence                11222  346655220  01223444568999999999765

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.48  E-value=1.4e-06  Score=64.91  Aligned_cols=92  Identities=15%  Similarity=0.041  Sum_probs=57.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHH-hhCCCCcEEEEeecCCCCCC--H-------HHHHHHHhcChhhhhhhhhccccCCc
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAKRGLT--P-------KARLAEFSKLPVFERLRKECPAQLSR   78 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~-~~g~~~~~v~~~~r~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (152)
                      ..|++||||+++++|.+.+.+|+ ..|.   .++.+.+...+..  .       .+.+.+.            ....+..
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA---~vi~v~~~~~~~~~~~atag~~~~~a~~~~------------i~~~G~~  113 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGA---ATIGVSFEKAGSETKYGTPGWYNNLAFDEA------------AKREGLY  113 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCCSSSCCCHHHHHHHHHHHH------------HHHHTCC
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCC---CEEEEecCCcccccccccccchhHHHHHHH------------HHHcCCC
Confidence            46899999999999999999987 5664   5666666543221  0       1111111            1112468


Q ss_pred             EEEEEcccCCCCCCCC-hhHHHHHhccccEEEeccccc
Q psy11862         79 LHIIEGDILQANLGIK-DSDLLMLQEEVSVVFNGAASL  115 (152)
Q Consensus        79 ~~~~~~D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~  115 (152)
                      ...+.+|+++++.--. .+.+.+.+.++|++||++|..
T Consensus       114 a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          114 SVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             EEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             ceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence            8899999999651000 112223334789999999865

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.43  E-value=6.9e-07  Score=67.22  Aligned_cols=84  Identities=20%  Similarity=0.298  Sum_probs=57.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCC-cEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDI-GKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      |++++|+|+ |++|+++++.|++.| .+ ..|.+.+|+..      +.+.+..     .+.   .....++..+.+|+++
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g-~~~~~V~v~~r~~~------~~~~la~-----~l~---~~~~~~~~~~~~D~~d   64 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNR-EVFSHITLASRTLS------KCQEIAQ-----SIK---AKGYGEIDITTVDADS   64 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCT-TTCCEEEEEESCHH------HHHHHHH-----HHH---HTTCCCCEEEECCTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEEECCHH------HHHHHHH-----Hhh---hhcCCceEEEEecCCC
Confidence            368999998 899999999999986 22 37788887532      2221111     000   0011357888999987


Q ss_pred             CCCCCChhHHHHHhcc--ccEEEeccccc
Q psy11862         89 ANLGIKDSDLLMLQEE--VSVVFNGAASL  115 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~--~d~vi~~a~~~  115 (152)
                      .+      ++.+++++  +|+|||+++..
T Consensus        65 ~~------~l~~~l~~~~~DvVin~ag~~   87 (405)
T 4ina_A           65 IE------ELVALINEVKPQIVLNIALPY   87 (405)
T ss_dssp             HH------HHHHHHHHHCCSEEEECSCGG
T ss_pred             HH------HHHHHHHhhCCCEEEECCCcc
Confidence            43      68888876  89999999854

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.38  E-value=4.1e-06  Score=53.35  Aligned_cols=76  Identities=17%  Similarity=0.270  Sum_probs=50.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|+|+ |.+|..+++.|.+.|++   |++++|++      +....+..               .....+.+|..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~---v~~~d~~~------~~~~~~~~---------------~~~~~~~~d~~   58 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHE---VLAVDINE------EKVNAYAS---------------YATHAVIANAT   58 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCC---CEEEESCH------HHHHTTTT---------------TCSEEEECCTT
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCCH------HHHHHHHH---------------hCCEEEEeCCC
Confidence            45678999997 99999999999999864   45666632      22222111               12345678876


Q ss_pred             CCCCCCChhHHHHH-hccccEEEecccc
Q psy11862         88 QANLGIKDSDLLML-QEEVSVVFNGAAS  114 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-~~~~d~vi~~a~~  114 (152)
                      +++      .+.+. ++++|++|++.+.
T Consensus        59 ~~~------~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           59 EEN------ELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             CHH------HHHTTTGGGCSEEEECCCS
T ss_pred             CHH------HHHhcCCCCCCEEEECCCC
Confidence            632      45554 5789999998764

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.34  E-value=1.5e-05  Score=58.08  Aligned_cols=116  Identities=16%  Similarity=0.054  Sum_probs=74.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|.|+|++|++|..++..|+..|. +..+.++++++    ......++...         .  ...++....+  +   
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~----~~~~a~dL~~~---------~--~~~~l~~~~~--t---   59 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH----TPGVAADLSHI---------E--TRATVKGYLG--P---   59 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS----HHHHHHHHTTS---------S--SSCEEEEEES--G---
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCc----cHHHHHHHhcc---------C--cCceEEEecC--C---
Confidence            4799999999999999999988763 45788998864    12211222110         0  0111222111  0   


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                           .++...++++|+||+++|.... .....+++..|+..+..+++.+.+...-.+++++|
T Consensus        60 -----~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           60 -----EQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             -----GGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             -----CCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence                 1367778999999999987643 23334567889999999998888763223566554

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.29  E-value=1.1e-06  Score=64.45  Aligned_cols=118  Identities=19%  Similarity=0.095  Sum_probs=72.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcE-----EEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGK-----VYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~-----v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ++|+||||+|++|++++..|+..+. +..     ++++++.+.    .+.+....     .++....   .+-..  ...
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~----~~~~~g~a-----~DL~~~~---~~~~~--~~~   68 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPM----MGVLDGVL-----MELQDCA---LPLLK--DVI   68 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGG----HHHHHHHH-----HHHHHTC---CTTEE--EEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCc----cccchhhH-----hhhHhhh---hcccC--CEE
Confidence            5899999999999999999987643 223     777776421    11111100     0111100   01111  111


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCc--ceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLV--VSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~v~~S  152 (152)
                      ..+        +..+.++++|+||++||.... .++..++++.|+..+..+++.+.+. +.+  +++.+|
T Consensus        69 ~~~--------~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvs  129 (333)
T 5mdh_A           69 ATD--------KEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVG  129 (333)
T ss_dssp             EES--------CHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECS
T ss_pred             EcC--------CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Confidence            111        256667899999999997643 3455668899999999999999887 333  455543

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.22  E-value=5.5e-06  Score=53.00  Aligned_cols=74  Identities=19%  Similarity=0.192  Sum_probs=51.8

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++++|+|+ |.+|.++++.|.+.|+   .|+++++++      +.+..+..               ..+.++.+|.++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~---~V~~id~~~------~~~~~~~~---------------~~~~~~~gd~~~   59 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGK---KVLAVDKSK------EKIELLED---------------EGFDAVIADPTD   59 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTC---CEEEEESCH------HHHHHHHH---------------TTCEEEECCTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEECCH------HHHHHHHH---------------CCCcEEECCCCC
Confidence            4678999997 8899999999999987   567777642      23332221               346678899988


Q ss_pred             CCCCCChhHHHHH-hccccEEEeccc
Q psy11862         89 ANLGIKDSDLLML-QEEVSVVFNGAA  113 (152)
Q Consensus        89 ~~~~~~~~~~~~~-~~~~d~vi~~a~  113 (152)
                      ++      .+.++ .+++|++|.+.+
T Consensus        60 ~~------~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A           60 ES------FYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             HH------HHHHSCCTTCSEEEECCS
T ss_pred             HH------HHHhCCcccCCEEEEecC
Confidence            54      35544 357899998765

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.19  E-value=4e-06  Score=61.71  Aligned_cols=112  Identities=9%  Similarity=0.085  Sum_probs=70.7

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      ++.|++++|.|+|++|++|+.++..++..|. +..|++++...      +++....     .++.... ....++.    
T Consensus         3 ~~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~~------~k~~g~a-----~DL~~~~-~~~~~i~----   65 (343)
T 3fi9_A            3 LSYLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPFA------VGLEGVA-----EEIRHCG-FEGLNLT----   65 (343)
T ss_dssp             CCCSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSCH------HHHHHHH-----HHHHHHC-CTTCCCE----
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCCc------hhHHHHH-----HhhhhCc-CCCCceE----
Confidence            4568889999999999999999999988874 23678887632      1111100     0111110 0001111    


Q ss_pred             ccCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         85 DILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                       .+.        +....++++|+||.++|.... .++..+++..|+.....+.+...+.
T Consensus        66 -~t~--------d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~  115 (343)
T 3fi9_A           66 -FTS--------DIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY  115 (343)
T ss_dssp             -EES--------CHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -EcC--------CHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence             111        356677899999999997543 3445668899999999999998876

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.18  E-value=5.1e-06  Score=63.63  Aligned_cols=81  Identities=22%  Similarity=0.292  Sum_probs=55.1

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++++++|+|+ |++|++++..|++.+ . ..|.+.+|+..      +.+.+...              ..+..+.+|
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~-g-~~V~v~~R~~~------ka~~la~~--------------~~~~~~~~D   75 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAAND-D-INVTVACRTLA------NAQALAKP--------------SGSKAISLD   75 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTST-T-EEEEEEESSHH------HHHHHHGG--------------GTCEEEECC
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCC-C-CeEEEEECCHH------HHHHHHHh--------------cCCcEEEEe
Confidence            3467889999997 999999999999873 1 26888888532      22222110              134556788


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccc
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASL  115 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~  115 (152)
                      +.+.+      ++.++++++|+|||+++..
T Consensus        76 ~~d~~------~l~~~l~~~DvVIn~tp~~   99 (467)
T 2axq_A           76 VTDDS------ALDKVLADNDVVISLIPYT   99 (467)
T ss_dssp             TTCHH------HHHHHHHTSSEEEECSCGG
T ss_pred             cCCHH------HHHHHHcCCCEEEECCchh
Confidence            87643      5777788999999999864

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.12  E-value=1.2e-05  Score=52.19  Aligned_cols=79  Identities=11%  Similarity=0.101  Sum_probs=53.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |..++++|+|+ |.+|+.+++.|.+.|+   .|.++++++.  ...+.+....               ..++.++.+|.+
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~---~V~vid~~~~--~~~~~~~~~~---------------~~~~~~i~gd~~   59 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQ---NVTVISNLPE--DDIKQLEQRL---------------GDNADVIPGDSN   59 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTC---CEEEEECCCH--HHHHHHHHHH---------------CTTCEEEESCTT
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCC---CEEEEECCCh--HHHHHHHHhh---------------cCCCeEEEcCCC
Confidence            34578999985 9999999999999986   5566776421  1111222211               145778899998


Q ss_pred             CCCCCCChhHHHHH-hccccEEEeccc
Q psy11862         88 QANLGIKDSDLLML-QEEVSVVFNGAA  113 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-~~~~d~vi~~a~  113 (152)
                      +++      .+.+. ++++|.+|.+.+
T Consensus        60 ~~~------~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A           60 DSS------VLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             SHH------HHHHHTTTTCSEEEECSS
T ss_pred             CHH------HHHHcChhhCCEEEEecC
Confidence            754      46655 778999997754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.97  E-value=8.6e-05  Score=50.02  Aligned_cols=37  Identities=19%  Similarity=0.262  Sum_probs=31.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ...+++++|+||+|++|..+++.+...|.   +|++.+|+
T Consensus        36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~~   72 (198)
T 1pqw_A           36 LSPGERVLIHSATGGVGMAAVSIAKMIGA---RIYTTAGS   72 (198)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHHTC---EEEEEESS
T ss_pred             CCCCCEEEEeeCCChHHHHHHHHHHHcCC---EEEEEeCC
Confidence            34678999999999999999999988885   67777764

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.96  E-value=4.4e-05  Score=48.26  Aligned_cols=74  Identities=18%  Similarity=0.184  Sum_probs=48.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++++|+|+ |.+|..+++.|.+.|+   .|.+++|++      +.+..+..              ..++.++.+|..++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~---~v~~~d~~~------~~~~~~~~--------------~~~~~~~~~d~~~~   59 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGH---DIVLIDIDK------DICKKASA--------------EIDALVINGDCTKI   59 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH--------------HCSSEEEESCTTSH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCH------HHHHHHHH--------------hcCcEEEEcCCCCH
Confidence            578999986 9999999999999886   677777642      22222211              01345667787663


Q ss_pred             CCCCChhHHHHH-hccccEEEeccc
Q psy11862         90 NLGIKDSDLLML-QEEVSVVFNGAA  113 (152)
Q Consensus        90 ~~~~~~~~~~~~-~~~~d~vi~~a~  113 (152)
                      +      .+... ++++|+||++.+
T Consensus        60 ~------~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A           60 K------TLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             H------HHHHTTTTTCSEEEECCS
T ss_pred             H------HHHHcCcccCCEEEEeeC
Confidence            2      34433 568999999864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.96  E-value=5.5e-05  Score=56.00  Aligned_cols=72  Identities=19%  Similarity=0.239  Sum_probs=52.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+|.|+ |++|+.+++.|.+. +   .|.+.+++.      ++++...                .....+..|+.|. 
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~~-~---~v~~~~~~~------~~~~~~~----------------~~~~~~~~d~~d~-   68 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKDE-F---DVYIGDVNN------ENLEKVK----------------EFATPLKVDASNF-   68 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTT-S---EEEEEESCH------HHHHHHT----------------TTSEEEECCTTCH-
T ss_pred             cEEEEECC-CHHHHHHHHHHhcC-C---CeEEEEcCH------HHHHHHh----------------ccCCcEEEecCCH-
Confidence            47999998 99999999998765 4   566666642      2333221                3445677898874 


Q ss_pred             CCCChhHHHHHhccccEEEeccccc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASL  115 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~  115 (152)
                           +++.+++++.|+||++++..
T Consensus        69 -----~~l~~~~~~~DvVi~~~p~~   88 (365)
T 3abi_A           69 -----DKLVEVMKEFELVIGALPGF   88 (365)
T ss_dssp             -----HHHHHHHTTCSEEEECCCGG
T ss_pred             -----HHHHHHHhCCCEEEEecCCc
Confidence                 47899999999999998653

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.86  E-value=7.1e-05  Score=48.60  Aligned_cols=81  Identities=14%  Similarity=0.180  Sum_probs=51.0

Q ss_pred             ccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          3 DVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         3 ~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      .|+....+++++|+|+ |.+|..+++.|.+.|+   .|++++|++..      +..+.            .  ..+..++
T Consensus        12 ~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~---~V~vid~~~~~------~~~~~------------~--~~g~~~~   67 (155)
T 2g1u_A           12 HMSKKQKSKYIVIFGC-GRLGSLIANLASSSGH---SVVVVDKNEYA------FHRLN------------S--EFSGFTV   67 (155)
T ss_dssp             -----CCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCGGG------GGGSC------------T--TCCSEEE
T ss_pred             hhhcccCCCcEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHHH------HHHHH------------h--cCCCcEE
Confidence            3556667889999995 9999999999999885   67788875431      11110            0  1234566


Q ss_pred             EcccCCCCCCCChhHHHHH-hccccEEEeccc
Q psy11862         83 EGDILQANLGIKDSDLLML-QEEVSVVFNGAA  113 (152)
Q Consensus        83 ~~D~~~~~~~~~~~~~~~~-~~~~d~vi~~a~  113 (152)
                      .+|..+++      .+.+. +.++|+||.+.+
T Consensus        68 ~~d~~~~~------~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           68 VGDAAEFE------TLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             ESCTTSHH------HHHTTTGGGCSEEEECSS
T ss_pred             EecCCCHH------HHHHcCcccCCEEEEEeC
Confidence            67766532      34443 568899998865

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.79  E-value=0.00013  Score=53.15  Aligned_cols=37  Identities=14%  Similarity=0.198  Sum_probs=31.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++++|+|+ |++|++++..|.+.|.  .+|++..|++
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~  188 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKD  188 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSS
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCC
Confidence            57899999997 7999999999999875  5788888873

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.70  E-value=0.00036  Score=51.38  Aligned_cols=115  Identities=17%  Similarity=0.105  Sum_probs=70.4

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhh---CCC-CcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRS---CPD-IGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHI   81 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~---g~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (152)
                      .+|+.-+|.|+||+|.||+.++..|...   |.+ ...+.+++..+.    .+.++...     -++... . .+.....
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~----~~~~~Gva-----~DL~~~-~-~~~~~~~   88 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPA----LKALAGVE-----AELEDC-A-FPLLDKV   88 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG----HHHHHHHH-----HHHHHT-T-CTTEEEE
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCc----cccchhhh-----hhhhhc-C-ccCCCcE
Confidence            4566679999999999999999988764   211 125777775322    11111100     011110 0 0111112


Q ss_pred             EEcccCCCCCCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         82 IEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        82 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      +.   .+        +....++++|+||-.||... ..++..++++.|..-...+.+...+.
T Consensus        89 ~~---~~--------~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~  139 (345)
T 4h7p_A           89 VV---TA--------DPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAV  139 (345)
T ss_dssp             EE---ES--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EE---cC--------ChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhh
Confidence            11   11        24566789999999999765 34667789999999999999998774

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.68  E-value=0.0029  Score=45.89  Aligned_cols=106  Identities=16%  Similarity=0.062  Sum_probs=69.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |+|.|+||+|.+|..++..|... +. +..+++++..+.   ..-..-++         ...    .....+... .++ 
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~-~~el~L~Di~~~---~~G~a~Dl---------~~~----~~~~~v~~~-~~~-   61 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPV---TPGVAVDL---------SHI----PTAVKIKGF-SGE-   61 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCT-TEEEEEECSSTT---HHHHHHHH---------HTS----CSSEEEEEE-CSS-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC-CceEEEEecCCC---chhHHHHh---------hCC----CCCceEEEe-cCC-
Confidence            57999999999999999998876 43 357888887541   11111111         110    111222111 111 


Q ss_pred             CCCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                             +....++++|+||-.+|... ..++..++++.|+.-...+.+...+.
T Consensus        62 -------~~~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~  108 (312)
T 3hhp_A           62 -------DATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT  108 (312)
T ss_dssp             -------CCHHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                   12456689999999999764 34566778999999999999888876

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.62  E-value=0.00013  Score=52.32  Aligned_cols=37  Identities=19%  Similarity=0.127  Sum_probs=31.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++++|+|+ |++|++++..|.+.|.  .+|++..|+.
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~--~~v~i~~R~~  161 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT  161 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEECCH
Confidence            57899999997 8999999999999875  4788888863

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.60  E-value=0.00055  Score=49.82  Aligned_cols=36  Identities=25%  Similarity=0.221  Sum_probs=31.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ..+++++|+|++|++|..+++.+...|.   +|++.+|+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~~  179 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGC---KVVGAAGS  179 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCC---EEEEEeCC
Confidence            4678999999999999999999988885   67887764

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.58  E-value=0.0015  Score=47.67  Aligned_cols=108  Identities=14%  Similarity=0.098  Sum_probs=57.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++++|.|+|+ |.+|..++..|+..|. +..++++++++      +.+....     .++....+. ...+.....|  
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~------~k~~g~a-----~DL~~~~~~-~~~~~i~~~~--   70 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFK------DKTKGDA-----IDLEDALPF-TSPKKIYSAE--   70 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHH-----HHHHTTGGG-SCCCEEEECC--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCCh------HHHHHHH-----hhHhhhhhh-cCCcEEEECc--
Confidence            45679999996 9999999999998864 34788888632      1121100     011111110 1223333222  


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                 .+.++++|+||.+||.... .++..++++.|+.-...+.+...+.
T Consensus        71 -----------~~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~  115 (326)
T 3vku_A           71 -----------YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS  115 (326)
T ss_dssp             -----------GGGGTTCSEEEECCCCC----------------CHHHHHHHHHTT
T ss_pred             -----------HHHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence                       1245789999999997543 3445557888888888888888876

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.57  E-value=0.0045  Score=45.18  Aligned_cols=108  Identities=13%  Similarity=0.063  Sum_probs=68.0

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +.++|.|+|+ |.+|..++..|+..|. +..++++++++      +++....     .++....+.....+.....|.  
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~~------~k~~g~a-----~DL~~~~~~~~~~v~i~~~~~--   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVNK------EKAMGDV-----MDLNHGKAFAPQPVKTSYGTY--   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHH-----HHHHHTGGGSSSCCEEEEECG--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecch------HHHHHHH-----HHHHhccccccCCeEEEeCcH--
Confidence            3578999995 9999999999999864 24788888642      1111100     011111111112233332221  


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                 +.++++|+||.++|.... .++..+++..|+.....+.+...+.
T Consensus        69 -----------~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~  112 (326)
T 3pqe_A           69 -----------EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS  112 (326)
T ss_dssp             -----------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -----------HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence                       245789999999997543 3445668899999999999888876

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.53  E-value=0.0038  Score=45.45  Aligned_cols=118  Identities=14%  Similarity=0.060  Sum_probs=71.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++|.|+| +|.+|..++..|+..|. . .++++++++.  .+.....++.....+       ......+.. ..|  
T Consensus         3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~-~-~v~l~Di~~~--~~~g~a~dL~~~~~~-------~~~~~~v~~-t~d--   67 (321)
T 3p7m_A            3 MARKKITLVG-AGNIGGTLAHLALIKQL-G-DVVLFDIAQG--MPNGKALDLLQTCPI-------EGVDFKVRG-TND--   67 (321)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTC-C-EEEEECSSSS--HHHHHHHHHHTTHHH-------HTCCCCEEE-ESC--
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCC-c-eEEEEeCChH--HHHHHHHHHHhhhhh-------cCCCcEEEE-cCC--
Confidence            5668999999 59999999999998875 2 7888887643  111111122111000       000112211 111  


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                                 .+.++++|+||.++|.... .....+++..|+.....+++...+...-..++.+
T Consensus        68 -----------~~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivv  121 (321)
T 3p7m_A           68 -----------YKDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICI  121 (321)
T ss_dssp             -----------GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             -----------HHHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEe
Confidence                       1255789999999987543 3445667888999999998888876322244443

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.52  E-value=0.00042  Score=50.47  Aligned_cols=36  Identities=19%  Similarity=0.204  Sum_probs=31.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ..+++++|+|++|++|..+++.+...|.   +|++.+|+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~Vi~~~~~  179 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGA---TVIGTVST  179 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCC
Confidence            4678999999999999999999988885   77888875

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.52  E-value=0.0003  Score=48.20  Aligned_cols=73  Identities=23%  Similarity=0.206  Sum_probs=49.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++|+|+ |.+|+++++.|.+.|+   .|.++++++      +.+..+..              ..++.++.+|.++++
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~---~v~vid~~~------~~~~~l~~--------------~~~~~~i~gd~~~~~   56 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKY---GVVIINKDR------ELCEEFAK--------------KLKATIIHGDGSHKE   56 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTC---CEEEEESCH------HHHHHHHH--------------HSSSEEEESCTTSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCH------HHHHHHHH--------------HcCCeEEEcCCCCHH
Confidence            47899995 9999999999999987   456667642      22322211              024667889988854


Q ss_pred             CCCChhHHHHH-hccccEEEeccc
Q psy11862         91 LGIKDSDLLML-QEEVSVVFNGAA  113 (152)
Q Consensus        91 ~~~~~~~~~~~-~~~~d~vi~~a~  113 (152)
                            .+.+. ++++|++|-+.+
T Consensus        57 ------~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C           57 ------ILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             ------HHHHHTCCTTCEEEECCS
T ss_pred             ------HHHhcCcccCCEEEEecC
Confidence                  45554 568898886643

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.50  E-value=0.00045  Score=50.14  Aligned_cols=36  Identities=11%  Similarity=0.011  Sum_probs=31.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+++++|+||+|++|..+++.+...|.   +|++.+|+
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~V~~~~~~  174 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGA---KLIGTVGT  174 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTC---EEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCC
Confidence            4678999999999999999999988885   67888774

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.45  E-value=0.0024  Score=46.00  Aligned_cols=115  Identities=11%  Similarity=0.035  Sum_probs=71.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE-cccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE-GDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~   89 (152)
                      |+|.|+|+ |.+|+.++..|+.++ -+..+.+++..+..  +.-...         ++.+............. .|.   
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~-~~~el~L~Di~~~~--~~G~a~---------DL~h~~~~~~~~~~i~~~~d~---   64 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDL--AVGEAM---------DLAHAAAGIDKYPKIVGGADY---   64 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHH--HHHHHH---------HHHHHHGGGTCCCEEEEESCG---
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeCCCCc--chhhhh---------hhhcccccCCCCCeEecCCCH---
Confidence            57889995 999999999998885 45688888864310  110011         11111111111122221 122   


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                                +.++++|+||-.||.... .++..++++.|..-...+.+...+...-..++.+
T Consensus        65 ----------~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvv  117 (294)
T 2x0j_A           65 ----------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVV  117 (294)
T ss_dssp             ----------GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEEC
T ss_pred             ----------HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEe
Confidence                      134789999999997653 5677789999999999999999886322334444

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.45  E-value=0.00019  Score=53.21  Aligned_cols=77  Identities=18%  Similarity=0.180  Sum_probs=49.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.+++++|+|+ |.+|..+++.+...|.   +|++.+|++.      +++.....            ....   +.+|..
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga---~V~~~d~~~~------~~~~~~~~------------~g~~---~~~~~~  218 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGA---QVTILDVNHK------RLQYLDDV------------FGGR---VITLTA  218 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHHH------------TTTS---EEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEECCHH------HHHHHHHh------------cCce---EEEecC
Confidence            56789999998 9999999999999885   7788887532      22211100            0112   233444


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASL  115 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~  115 (152)
                      +.      +++.+.++++|+||++++..
T Consensus       219 ~~------~~l~~~~~~~DvVi~~~g~~  240 (369)
T 2eez_A          219 TE------ANIKKSVQHADLLIGAVLVP  240 (369)
T ss_dssp             CH------HHHHHHHHHCSEEEECCC--
T ss_pred             CH------HHHHHHHhCCCEEEECCCCC
Confidence            32      35667777888888888743

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.45  E-value=0.00035  Score=46.45  Aligned_cols=75  Identities=15%  Similarity=0.134  Sum_probs=50.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +.+++++|+| .|.+|..+++.|.+. |+   .|+++++++      +++..+..               .++.++.+|.
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~---~V~vid~~~------~~~~~~~~---------------~g~~~~~gd~   91 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGK---ISLGIEIRE------EAAQQHRS---------------EGRNVISGDA   91 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCS---CEEEEESCH------HHHHHHHH---------------TTCCEEECCT
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCC---eEEEEECCH------HHHHHHHH---------------CCCCEEEcCC
Confidence            4466899998 699999999999998 87   566777642      22322211               2345667787


Q ss_pred             CCCCCCCChhHHHHH--hccccEEEeccc
Q psy11862         87 LQANLGIKDSDLLML--QEEVSVVFNGAA  113 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~--~~~~d~vi~~a~  113 (152)
                      ++++      .+.++  ++++|.||.+.+
T Consensus        92 ~~~~------~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           92 TDPD------FWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             TCHH------HHHTBCSCCCCCEEEECCS
T ss_pred             CCHH------HHHhccCCCCCCEEEEeCC
Confidence            6633      34554  567888887654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.44  E-value=0.00052  Score=50.46  Aligned_cols=36  Identities=28%  Similarity=0.219  Sum_probs=30.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+++++|+|++|++|..+++.+...|.   +|++.+|+
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga---~Vi~~~~~  204 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGL---KILGTAGT  204 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCC
Confidence            4678999999999999999999888885   67888765

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.44  E-value=0.0041  Score=45.20  Aligned_cols=107  Identities=15%  Similarity=0.127  Sum_probs=64.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |++.|+|+ |.+|..++..|+..|. +..++++++++.  .+.-...++.         ...........+...|  +  
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~--k~~g~a~DL~---------~~~~~~~~~~~v~~~~--~--   63 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDG--MPQGKALDMR---------ESSPIHGFDTRVTGTN--D--   63 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTT--HHHHHHHHHH---------HHHHHHTCCCEEEEES--S--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchH--HHHHHHHHHh---------ccccccCCCcEEEECC--C--
Confidence            57899996 9999999999998864 458888887653  1111111111         0000001122222111  1  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                              ...++++|+||-++|.... ..+..+++..|+.-...+.+...+.
T Consensus        64 --------~~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~  108 (314)
T 3nep_X           64 --------YGPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG  108 (314)
T ss_dssp             --------SGGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --------HHHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh
Confidence                    1245789999999987642 3445568889999999998888876

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.44  E-value=0.0006  Score=50.12  Aligned_cols=37  Identities=16%  Similarity=0.146  Sum_probs=31.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .-.+++++|+||+|++|..+++.+...|.   +|++.+|+
T Consensus       160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~Vi~~~~~  196 (354)
T 2j8z_A          160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGA---IPLVTAGS  196 (354)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeCC
Confidence            34678999999999999999999988875   67888874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.44  E-value=0.0008  Score=49.26  Aligned_cols=37  Identities=19%  Similarity=0.227  Sum_probs=31.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..+++++|+|++|++|..+++.+...|.   +|++.+|++
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~V~~~~~~~  204 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGY---RVLGIDGGE  204 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECST
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---cEEEEcCCH
Confidence            4678999999999999999999888875   778888754

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.43  E-value=0.0029  Score=46.18  Aligned_cols=111  Identities=14%  Similarity=0.070  Sum_probs=65.7

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..|++++|.|+|+ |.+|..++..|+..|. . .++++++++.  .+.....++.....+       ......+.. ..|
T Consensus         3 ~~m~~~kI~viGa-G~vG~~~a~~l~~~~~-~-~v~L~Di~~~--~~~g~~~dl~~~~~~-------~~~~~~v~~-t~d   69 (324)
T 3gvi_A            3 GSMARNKIALIGS-GMIGGTLAHLAGLKEL-G-DVVLFDIAEG--TPQGKGLDIAESSPV-------DGFDAKFTG-AND   69 (324)
T ss_dssp             ---CCCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSS--HHHHHHHHHHHHHHH-------HTCCCCEEE-ESS
T ss_pred             CCCcCCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCch--hHHHHHHHHhchhhh-------cCCCCEEEE-eCC
Confidence            3467789999997 9999999999999876 2 7888887653  111111111110000       000112211 122


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                  . +.++++|+||.++|.... ..+..+++..|+.....+++...+.
T Consensus        70 ------------~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~  114 (324)
T 3gvi_A           70 ------------Y-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY  114 (324)
T ss_dssp             ------------G-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------H-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH
Confidence                        2 355789999999986542 2334457788888888888888776

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.41  E-value=0.00098  Score=42.41  Aligned_cols=72  Identities=19%  Similarity=0.257  Sum_probs=49.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      .+++|.|. |.+|..+++.|.+.|+   .|+++++++      +++..+..               .++.++.+|.++++
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~---~v~vid~~~------~~~~~~~~---------------~g~~~i~gd~~~~~   62 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDI---PLVVIETSR------TRVDELRE---------------RGVRAVLGNAANEE   62 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTC---CEEEEESCH------HHHHHHHH---------------TTCEEEESCTTSHH
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCC---CEEEEECCH------HHHHHHHH---------------cCCCEEECCCCCHH
Confidence            47888885 9999999999999987   567777642      23333221               35677889998854


Q ss_pred             CCCChhHHHHH-hccccEEEeccc
Q psy11862         91 LGIKDSDLLML-QEEVSVVFNGAA  113 (152)
Q Consensus        91 ~~~~~~~~~~~-~~~~d~vi~~a~  113 (152)
                            .+.+. ++++|.+|-+.+
T Consensus        63 ------~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A           63 ------IMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             ------HHHHTTGGGCSEEEECCS
T ss_pred             ------HHHhcCcccCCEEEEECC
Confidence                  34443 457899987654

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.32  E-value=0.017  Score=41.94  Aligned_cols=109  Identities=12%  Similarity=0.167  Sum_probs=66.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |+.++|.|+|+ |.+|..++..|+..+. +..+.+++.++      ++++...     .++....+....++.+.. |  
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~------~~~~g~~-----~dl~~~~~~~~~~~~v~~-~--   67 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDT------EKVRGDV-----MDLKHATPYSPTTVRVKA-G--   67 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCH------HHHHHHH-----HHHHHHGGGSSSCCEEEE-C--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHhhhhh-----hhHHhhhhhcCCCeEEEe-C--
Confidence            45579999998 9999999999988864 45788887642      1221100     001111111112233322 2  


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      +          ...++++|+||..++.... .....++...|+.....+.+...+.
T Consensus        68 ~----------~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  113 (317)
T 3d0o_A           68 E----------YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS  113 (317)
T ss_dssp             C----------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             C----------HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            1          2235789999999987543 3444557788888888888887775

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.30  E-value=0.00096  Score=48.46  Aligned_cols=37  Identities=11%  Similarity=0.200  Sum_probs=31.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++++|+|+ |+.|++++..|.+.|.  .+|++..|+.
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~--~~v~v~nRt~  182 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGI--KEIKLFNRKD  182 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSS
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCC--CEEEEEECCC
Confidence            56889999996 8999999999999875  5788888863

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.27  E-value=0.00021  Score=50.26  Aligned_cols=38  Identities=21%  Similarity=0.206  Sum_probs=31.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+++++|+|.| .|++|.++++.|+..|.  .++.+++++.
T Consensus        28 ~l~~~~VlVvG-~Gg~G~~va~~La~~Gv--~~i~lvD~d~   65 (249)
T 1jw9_B           28 ALKDSRVLIVG-LGGLGCAASQYLASAGV--GNLTLLDFDT   65 (249)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECCCB
T ss_pred             HHhCCeEEEEe-eCHHHHHHHHHHHHcCC--CeEEEEcCCC
Confidence            45678999999 57899999999999975  5888888765

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.26  E-value=0.00073  Score=49.20  Aligned_cols=37  Identities=19%  Similarity=0.194  Sum_probs=31.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .-.+++++|+|++|++|..+++.+...|.   +|++.+|+
T Consensus       147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~  183 (336)
T 4b7c_A          147 PKNGETVVISGAAGAVGSVAGQIARLKGC---RVVGIAGG  183 (336)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCC
Confidence            34678999999999999999988888875   77888764

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.24  E-value=0.0078  Score=43.71  Aligned_cols=109  Identities=16%  Similarity=0.085  Sum_probs=67.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccc--cCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPA--QLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D   85 (152)
                      |+.+++.|+|+ |.+|..++..|+..|.  ..|.++++++.    .+..+...     .++....+.  ...++.. ..|
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~----~~~~~g~a-----~dl~~~~~~~~~~~~i~~-t~d   72 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQL----ENPTKGKA-----LDMLEASPVQGFDANIIG-TSD   72 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGG----HHHHHHHH-----HHHHHHHHHHTCCCCEEE-ESC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccch----HHHHHHhh-----hhHHHhhhhccCCCEEEE-cCC
Confidence            44578999996 9999999999999875  47888887521    11111110     011110000  0112221 111


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                   ...++++|+||.++|.... ..+..+++..|+.....+.+...+.
T Consensus        73 -------------~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~  117 (315)
T 3tl2_A           73 -------------YADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH  117 (315)
T ss_dssp             -------------GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                         1245789999999987643 3456678899999999998888776

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.22  E-value=0.00077  Score=49.54  Aligned_cols=37  Identities=24%  Similarity=0.298  Sum_probs=30.8

Q ss_pred             cCC--ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAG--RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~--~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+  ++++|+|++|++|..+++.+...|.  .+|++.+++
T Consensus       157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~  195 (357)
T 2zb4_A          157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGT  195 (357)
T ss_dssp             CTTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESC
T ss_pred             CCCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCC
Confidence            356  8999999999999999999888874  377777764

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.22  E-value=0.0021  Score=46.92  Aligned_cols=37  Identities=16%  Similarity=0.072  Sum_probs=31.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ...+++++|+|++|++|..+++.+...|.   +|++.+|+
T Consensus       153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~---~V~~~~~~  189 (345)
T 2j3h_A          153 PKEGETVYVSAASGAVGQLVGQLAKMMGC---YVVGSAGS  189 (345)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCC
Confidence            34678999999999999999998888874   67887764

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.20  E-value=0.015  Score=41.77  Aligned_cols=116  Identities=10%  Similarity=0.018  Sum_probs=69.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |++.|+|+ |.+|..++..|+..|. +..+.++++++.      .++...     .++.......+....+...  +|  
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~~------~~~g~~-----~dl~~~~~~~~~~~~i~~t--~d--   63 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAED------LAVGEA-----MDLAHAAAGIDKYPKIVGG--AD--   63 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHH------HHHHHH-----HHHHHHHHTTTCCCEEEEE--SC--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECChH------HHHHHH-----HHHHhhhhhcCCCCEEEEe--CC--
Confidence            57899998 9999999999998864 347888887532      111000     0011100000111222211  11  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                              .+.++++|+||.++|.... ..+..+++..|+.-...+.+...+...-..++.+
T Consensus        64 --------~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivv  117 (294)
T 1oju_A           64 --------YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVV  117 (294)
T ss_dssp             --------GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEEC
T ss_pred             --------HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence                    2245789999999987643 3456668888999999998888876322344444

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.20  E-value=0.012  Score=42.96  Aligned_cols=109  Identities=12%  Similarity=0.089  Sum_probs=67.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ...+++.|+|+ |.+|..++..|+..|. +..+++++++..  .+.-...++         ....+. ......+..  .
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~--~~~g~a~DL---------~~~~~~-~~~~~i~~~--~   80 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDL-ADELALVDVIED--KLKGEMMDL---------QHGSLF-LKTPKIVSS--K   80 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCHH--HHHHHHHHH---------HHTGGG-CSCCEEEEC--S
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEeCChH--HHHHHHHhh---------hhhhhc-cCCCeEEEc--C
Confidence            45679999997 9999999999998863 347888886421  111111111         111000 011111111  1


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      +         .. .++++|+||.++|.... .++..++++.|+.-...+.+...+.
T Consensus        81 d---------~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~  126 (331)
T 4aj2_A           81 D---------YS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY  126 (331)
T ss_dssp             S---------GG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             C---------HH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            1         22 35789999999997643 3445568889999888888888776

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.18  E-value=0.0018  Score=47.31  Aligned_cols=36  Identities=14%  Similarity=0.059  Sum_probs=30.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ..+++++|+|++|++|..+++.+...|.   +|++.+++
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~---~Vi~~~~~  200 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGA---RVIATAGS  200 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCC
Confidence            4678999999999999999998888875   67887764

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.16  E-value=0.0019  Score=47.32  Aligned_cols=36  Identities=14%  Similarity=0.149  Sum_probs=30.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~   46 (152)
                      -.+++++|+|++|++|..+++.+... |.   +|++.+++
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga---~Vi~~~~~  205 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGA---TIIGVDVR  205 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCC---EEEEEESS
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCC---eEEEEcCC
Confidence            36789999999999999999998888 85   67777764

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.13  E-value=0.03  Score=40.83  Aligned_cols=107  Identities=15%  Similarity=0.131  Sum_probs=64.7

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +.++|.|+|+ |.+|..++..|+..+. +..++++++...  .+.....++.         ...+ ...++.+.. |  +
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~-~~el~L~Di~~~--~~~g~~~dl~---------~~~~-~~~~~~i~~-~--~   70 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFKD--KTKGDAIDLS---------NALP-FTSPKKIYS-A--E   70 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHH--HHHHHHHHHH---------TTGG-GSCCCEEEE-C--C
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCch--HhHHHHHHHH---------HHHH-hcCCeEEEE-C--C
Confidence            4468999998 9999999999988864 567888887321  1111111111         1111 112333332 1  1


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                ...++++|+||..++.... .....++...|+.....+.+...+.
T Consensus        71 ----------~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~  115 (326)
T 2zqz_A           71 ----------YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS  115 (326)
T ss_dssp             ----------GGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                      2236789999999986542 2334456778888888888887765

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.09  E-value=0.004  Score=45.38  Aligned_cols=39  Identities=10%  Similarity=0.101  Sum_probs=32.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .-.+.+++|+|++|++|...+..+...|.   +|++.++++.
T Consensus       142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~~  180 (340)
T 3gms_A          142 LQRNDVLLVNACGSAIGHLFAQLSQILNF---RLIAVTRNNK  180 (340)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSST
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence            34678999999999999999988887874   7888887654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.06  E-value=0.0027  Score=45.99  Aligned_cols=37  Identities=14%  Similarity=0.074  Sum_probs=31.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .-.+.+++|+||+|++|...++.+...|.   +|++.+++
T Consensus       138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~  174 (325)
T 3jyn_A          138 VKPGEIILFHAAAGGVGSLACQWAKALGA---KLIGTVSS  174 (325)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESS
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCC
Confidence            34678999999999999999998888885   77887764

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.05  E-value=0.024  Score=40.93  Aligned_cols=103  Identities=18%  Similarity=0.158  Sum_probs=62.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .+++|.|+|+ |.+|..++..++..|. +..|++++.++.......++..+               ..+++.. ..|   
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~~~g~a~dl~~~---------------~~~~i~~-t~d---   71 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEGTKGATMDLEIF---------------NLPNVEI-SKD---   71 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC-----CHHHHHHH---------------TCTTEEE-ESC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcchHHHHHHHhhh---------------cCCCeEE-eCC---
Confidence            3478999995 8999999999998875 45788888765311111111111               0123433 122   


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                               + +.++++|+||..+|.........++...|+.-...+++...+.
T Consensus        72 ---------~-~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~  115 (303)
T 2i6t_A           72 ---------L-SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY  115 (303)
T ss_dssp             ---------G-GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------H-HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                     2 2457899999999875433444556777887777887777765

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.00  E-value=0.0032  Score=45.77  Aligned_cols=37  Identities=19%  Similarity=0.178  Sum_probs=30.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .-.+.+++|+||+|++|...+..+...|.   +|++.+++
T Consensus       146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~  182 (334)
T 3qwb_A          146 VKKGDYVLLFAAAGGVGLILNQLLKMKGA---HTIAVAST  182 (334)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCC
Confidence            34678999999999999999988888874   67887764

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.98  E-value=0.0035  Score=46.01  Aligned_cols=37  Identities=27%  Similarity=0.366  Sum_probs=31.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .-.+.+++|+||+|++|..+++.+...|.   +|++.+++
T Consensus       165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga---~Vi~~~~~  201 (353)
T 4dup_A          165 LTEGESVLIHGGTSGIGTTAIQLARAFGA---EVYATAGS  201 (353)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCC
Confidence            34678999999999999999998888875   67888865

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.96  E-value=0.017  Score=41.89  Aligned_cols=106  Identities=10%  Similarity=0.112  Sum_probs=63.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .++|.|+|+ |++|..++..|+..+. +..+++++.++...+  -...++..         ..+ ....+.+..   .+ 
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~~~~~--g~~~dl~~---------~~~-~~~~~~i~~---~~-   68 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAI--GEAMDINH---------GLP-FMGQMSLYA---GD-   68 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CC--HHHHHHTT---------SCC-CTTCEEEC-----C-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChHHHH--HHHHHHHH---------hHH-hcCCeEEEE---CC-
Confidence            468999997 9999999999998864 468899987643221  11111111         000 012222221   11 


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                               ...++++|+||.+++.... .....+....|+.....+++...+.
T Consensus        69 ---------~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~  113 (318)
T 1y6j_A           69 ---------YSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY  113 (318)
T ss_dssp             ---------GGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------HHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh
Confidence                     2236789999999986542 2334457788888888888888775

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.95  E-value=0.0074  Score=44.86  Aligned_cols=122  Identities=17%  Similarity=0.064  Sum_probs=69.7

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcE---EEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGK---VYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +..+|.|+||+|.+|++++..|+..+. +..   +.+......  ...+.+....     -++....   .+-..-  ..
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l-~~e~~~l~L~d~d~~--~~~~~~~G~a-----mDL~h~~---~p~~~~--v~   97 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEV-FGQDQPIALKLLGSE--RSFQALEGVA-----MELEDSL---YPLLRE--VS   97 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTT-TCTTCCEEEEEECCG--GGHHHHHHHH-----HHHHTTT---CTTEEE--EE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCc-CCCCceeEEEecCcc--chhhhhHHHH-----HhHHhhh---hhhcCC--cE
Confidence            446899999999999999999988642 112   444332111  1112111110     0111100   011111  11


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEec
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDI  151 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~  151 (152)
                      +..        +....++++|+||-.||... ..++..++++.|+.-...+.+...+. ..-..++.+
T Consensus        98 i~~--------~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVv  157 (375)
T 7mdh_A           98 IGI--------DPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVV  157 (375)
T ss_dssp             EES--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred             Eec--------CCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            121        13556789999999998754 34567778999999999998888764 222345544

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.92  E-value=0.00084  Score=47.21  Aligned_cols=39  Identities=18%  Similarity=0.135  Sum_probs=31.3

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++.+|+|.|+ |++|.++++.|+..|.  .++.+++++.
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gv--g~i~lvD~d~   62 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGV--GTLVLADDDD   62 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTC--SEEEEECCCB
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCC--CeEEEEeCCC
Confidence            3466789999995 6799999999999875  5788876653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.90  E-value=0.006  Score=44.94  Aligned_cols=35  Identities=26%  Similarity=0.321  Sum_probs=29.9

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++++|+|+ |++|..+++.+...|.   +|++.++++
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~  214 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGL---EVWMANRRE  214 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTC---EEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCc
Confidence            3899999999 9999999998888874   788888764

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.89  E-value=0.037  Score=40.15  Aligned_cols=105  Identities=11%  Similarity=0.079  Sum_probs=61.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++|.|+|+ |.+|..++..|+..+. +..++++++.+.  .+.....++         ....+. ..++.+.. |  +  
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~--~~~g~~~dl---------~~~~~~-~~~~~v~~-~--~--   66 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKD--RTKGDALDL---------EDAQAF-TAPKKIYS-G--E--   66 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH--HHHHHHHHH---------HGGGGG-SCCCEEEE-C--C--
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCch--HHHHHHHHH---------HHHHHh-cCCeEEEE-C--C--
Confidence            68999998 9999999999988864 568888887421  111111111         111111 12333332 1  1  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                              .+.++++|+||..++.... .....+....|+.....+.+...+.
T Consensus        67 --------~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~  111 (318)
T 1ez4_A           67 --------YSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS  111 (318)
T ss_dssp             --------GGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT
T ss_pred             --------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                    1236789999999986542 2223346677888888888877775

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.87  E-value=0.0078  Score=43.93  Aligned_cols=37  Identities=27%  Similarity=0.339  Sum_probs=31.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      -.+.+++|+|++|++|...+..+...|.   +|++.++++
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga---~Vi~~~~~~  194 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGA---KVIAVVNRT  194 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSG
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence            4678999999999999999988888875   778887754

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.87  E-value=0.0098  Score=43.78  Aligned_cols=36  Identities=25%  Similarity=0.337  Sum_probs=30.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+.+++|+||+|++|..+++.+...|.   +|++.+++
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga---~Vi~~~~~  197 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKC---HVIGTCSS  197 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEECC
Confidence            4678999999999999999988888875   67887764

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.84  E-value=0.0095  Score=43.21  Aligned_cols=38  Identities=42%  Similarity=0.502  Sum_probs=30.2

Q ss_pred             cCCce-EEEcCC-c-----------------chhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRS-VLVTGG-T-----------------GFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~-ilItG~-~-----------------G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +.|++ ++||+| |                 |-.|.+++++++..|+   .|.++.+..+
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga---~V~lv~g~~s   90 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGY---GVLFLYRARS   90 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTC---EEEEEEETTS
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCC---EEEEEecCCC
Confidence            56777 999874 4                 7799999999999997   6677777543

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.83  E-value=0.005  Score=40.01  Aligned_cols=73  Identities=12%  Similarity=0.041  Sum_probs=44.3

Q ss_pred             cchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-C---HHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCCCC
Q psy11862         19 TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-T---PKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLGIK   94 (152)
Q Consensus        19 ~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   94 (152)
                      +|.++.++++.|.+.|.   ++++..|+.... .   ..+.+..                .+.+...+++|++++.    
T Consensus        25 s~~p~~a~a~~La~~Ga---~vvi~~r~~~e~~~~~~~~~~~~~----------------~G~~~~~i~~Dv~~~~----   81 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGV---DVVINLMPDSSKDAHPDEGKLVTQ----------------AGMDYVYIPVDWQNPK----   81 (157)
T ss_dssp             EBCCCHHHHHHHHHTTC---CEEEECSCTTSTTSCTTHHHHHHH----------------TTCEEEECCCCTTSCC----
T ss_pred             cCCCCHHHHHHHHHcCC---CEEEECCCcccccccccHHHHHHH----------------cCCeEEEecCCCCCCC----
Confidence            45678999999999986   444445543221 1   1222111                1346777888998862    


Q ss_pred             hhHHHHHh-------ccccEEEeccccc
Q psy11862         95 DSDLLMLQ-------EEVSVVFNGAASL  115 (152)
Q Consensus        95 ~~~~~~~~-------~~~d~vi~~a~~~  115 (152)
                      ++++.+++       .+ |++|||+|..
T Consensus        82 ~~~v~~~~~~i~~~~G~-dVLVnnAgg~  108 (157)
T 3gxh_A           82 VEDVEAFFAAMDQHKGK-DVLVHCLANY  108 (157)
T ss_dssp             HHHHHHHHHHHHHTTTS-CEEEECSBSH
T ss_pred             HHHHHHHHHHHHhcCCC-CEEEECCCCC
Confidence            23444443       34 9999999864

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.83  E-value=0.0026  Score=45.70  Aligned_cols=41  Identities=27%  Similarity=0.246  Sum_probs=33.0

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      ++.++..+|+|.| .|++|.+++..|+..|.  .++.+++.+..
T Consensus        31 q~kL~~~~VlVvG-aGGlGs~va~~La~aGV--G~i~lvD~D~V   71 (292)
T 3h8v_A           31 YEKIRTFAVAIVG-VGGVGSVTAEMLTRCGI--GKLLLFDYDKV   71 (292)
T ss_dssp             -CGGGGCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECCCBC
T ss_pred             HHHHhCCeEEEEC-cCHHHHHHHHHHHHcCC--CEEEEECCCcc
Confidence            3456778999998 67899999999999975  68888887653

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.80  E-value=0.057  Score=39.36  Aligned_cols=108  Identities=12%  Similarity=0.054  Sum_probs=62.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .++|.|+|+ |.+|..++..|+..|+  ..|.++++++.  .+......+.. .    ... .. ...++..     +. 
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~--~~V~L~D~~~~--~~~~~~~~l~~-~----~~~-~~-~~~~i~~-----t~-   70 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKG--MPEGKALDLSH-V----TSV-VD-TNVSVRA-----EY-   70 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSS--HHHHHHHHHHH-H----HHH-TT-CCCCEEE-----EC-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEECChh--HHHHHHHHHHh-h----hhc-cC-CCCEEEE-----eC-
Confidence            358999997 9999999999999876  24788887642  12211111111 0    000 00 0112211     11 


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccch-h-----hHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLE-A-----ELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~-----~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                             ++.+.++++|+||..+|....+ .     ...+....|+.....+.+...+.
T Consensus        71 -------d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~  122 (331)
T 1pzg_A           71 -------SYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY  122 (331)
T ss_dssp             -------SHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             -------CHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                   2555678999999999765322 1     23334566667777777776665

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.80  E-value=0.003  Score=45.49  Aligned_cols=36  Identities=22%  Similarity=0.369  Sum_probs=30.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.+++++|+|+ |++|++++..|.+.|.  ..|++..|+
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~  174 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRT  174 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSS
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCC
Confidence            56889999996 7899999999999875  478888885

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.78  E-value=0.066  Score=38.70  Aligned_cols=105  Identities=13%  Similarity=0.083  Sum_probs=65.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++|.|+|+ |.+|..++..|+..+. +..++++++++      ++++...     .++....+. ..++.+...   +  
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~------~k~~g~a-----~dl~~~~~~-~~~~~v~~~---~--   61 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGV-AREVVLVDLDR------KLAQAHA-----EDILHATPF-AHPVWVWAG---S--   61 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHH-----HHHHTTGGG-SCCCEEEEC---C--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHHHHHH-----HHHHHhHhh-cCCeEEEEC---C--
Confidence            57999997 9999999999988753 56888888742      2222110     011111110 122333321   1  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                              .+.++++|+||..++.... .....++...|+.....+.+...+.
T Consensus        62 --------~~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  106 (310)
T 2xxj_A           62 --------YGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA  106 (310)
T ss_dssp             --------GGGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------HHHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH
Confidence                    1236789999999986543 3344456788888888888887765

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.77  E-value=0.054  Score=39.55  Aligned_cols=107  Identities=12%  Similarity=0.021  Sum_probs=64.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccc-cCCcEEEEEcccC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPA-QLSRLHIIEGDIL   87 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~   87 (152)
                      ..+++.|+|+ |.+|..++..++..|. +..++++++++.      .+....     .++...... ...++ ....|..
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~~------~~~g~a-----~DL~~~~~~~~~~~i-~~t~d~~   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVMED------KLKGEM-----MDLEHGSLFLHTAKI-VSGKDYS   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCHH------HHHHHH-----HHHHHHGGGSCCSEE-EEESSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCHH------HHHHHH-----HHhhhhhhcccCCeE-EEcCCHH
Confidence            4578999998 9999999999999864 347888876421      111110     011111010 01122 1223332


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      +             ++++|+||-++|.... .++..+++..|+.-...+.+...+.
T Consensus        86 ~-------------~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~  128 (330)
T 3ldh_A           86 V-------------SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH  128 (330)
T ss_dssp             S-------------CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH
T ss_pred             H-------------hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Confidence            1             4789999999987543 2334456777888888887777765

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.72  E-value=0.0053  Score=45.34  Aligned_cols=35  Identities=20%  Similarity=0.247  Sum_probs=30.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +..++++|+|+ |++|..++..+...|.   +|++.+|+
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga---~V~v~dr~  199 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGA---QVQIFDIN  199 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCC
Confidence            45689999998 9999999999999884   78888875

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.72  E-value=0.04  Score=39.75  Aligned_cols=106  Identities=11%  Similarity=0.125  Sum_probs=59.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++|.|+|+ |.+|..++..|+..|+ + .|.++++++.  .+.....++... .    ..  .....++... .|     
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~-~-~v~L~Di~~~--~~~g~~~dl~~~-~----~~--~~~~~~i~~t-~d-----   64 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKEL-G-DIVLLDIVEG--VPQGKALDLYEA-S----PI--EGFDVRVTGT-NN-----   64 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-S-EEEEECSSSS--HHHHHHHHHHTT-H----HH--HTCCCCEEEE-SC-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-C-eEEEEeCCcc--HHHHHHHhHHHh-H----hh--cCCCeEEEEC-CC-----
Confidence            68999998 9999999999988874 2 4788887532  121111111110 0    00  0001122211 22     


Q ss_pred             CCCChhHHHHHhccccEEEeccccccchh-hHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLEA-ELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                             + +.++++|+||.++|....+. ...++...|+.....+.+.+.+.
T Consensus        65 -------~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~  109 (309)
T 1ur5_A           65 -------Y-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL  109 (309)
T ss_dssp             -------G-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG
T ss_pred             -------H-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence                   2 34578999999998654321 22335677777777888777765

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.68  E-value=0.0018  Score=46.22  Aligned_cols=37  Identities=16%  Similarity=0.218  Sum_probs=30.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++++|+|+ |+.|++++..|.+.|.  ..|++..|+.
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~  151 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVR--PTLTVANRTM  151 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCC--SCCEEECSCG
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence            46789999996 7999999999999876  3667778764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.65  E-value=0.012  Score=43.01  Aligned_cols=35  Identities=11%  Similarity=0.203  Sum_probs=29.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++|+||+|++|...+..+...|.   +|++.++++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga---~Vi~~~~~~  199 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGF---RPIVTVRRD  199 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESCG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence            37999999999999999988888874   778887653

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.61  E-value=0.0073  Score=44.30  Aligned_cols=35  Identities=26%  Similarity=0.465  Sum_probs=27.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .|+++.|.|++|++|..+++.|.++ +++ .+..+..
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~-p~~-el~~l~s   37 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRH-PHM-NITALTV   37 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHC-TTE-EEEEEEE
T ss_pred             CceEEEEECCCChHHHHHHHHHHhC-CCC-cEEEEEe
Confidence            3578999999999999999988886 444 5555443

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.61  E-value=0.0087  Score=43.59  Aligned_cols=35  Identities=20%  Similarity=0.114  Sum_probs=28.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ..+.+++|+|+ |++|..+++.+...|.   +|+..+++
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga---~Vi~~~~~  197 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGL---NVVAVDIG  197 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTC---EEEEECSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCC
Confidence            35789999999 7899999988887774   77887764

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.58  E-value=0.0026  Score=45.29  Aligned_cols=39  Identities=31%  Similarity=0.520  Sum_probs=29.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |++++|.|.|++|.+|+.+++.+.+. .++.-+-+++|+.
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~   43 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG   43 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence            66789999999999999999999876 3544444466653

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.57  E-value=0.009  Score=44.15  Aligned_cols=35  Identities=23%  Similarity=0.446  Sum_probs=28.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      -.+.+++|+||+|++|...+..+...|.   +|++.++
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga---~Vi~~~~  216 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDA---HVTAVCS  216 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeC
Confidence            4678999999999999998888777774   6666653

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.53  E-value=0.094  Score=37.93  Aligned_cols=108  Identities=12%  Similarity=0.111  Sum_probs=62.3

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +.++|.|+|+ |.+|..++..|...|. +..|+++++++.      +.....     .++..........+.+.. +  +
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~~------~~~~~~-----~dl~~~~~~~~~~~~i~~-~--~   68 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANES------KAIGDA-----MDFNHGKVFAPKPVDIWH-G--D   68 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH------HHHHHH-----HHHHHHTTSSSSCCEEEE-C--C
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCcc------hHHHHH-----hhHHHHhhhcCCCeEEEc-C--c
Confidence            4579999998 9999999999988763 457888887532      111110     011111111111333332 1  1


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccch-hhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLE-AELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                ...++++|+||.+++....+ ....+.+..|......+.+...+.
T Consensus        69 ----------~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  113 (316)
T 1ldn_A           69 ----------YDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS  113 (316)
T ss_dssp             ----------GGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH
Confidence                      12357899999998865432 122234566666677777776664

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.51  E-value=0.0021  Score=47.71  Aligned_cols=36  Identities=33%  Similarity=0.464  Sum_probs=28.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      +++|.|.|++|++|..+++.|.++++....+..+..
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as   37 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS   37 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEEC
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEc
Confidence            358999999999999999988887555556666553

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.47  E-value=0.004  Score=45.95  Aligned_cols=40  Identities=18%  Similarity=0.222  Sum_probs=32.8

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.++..+|+|.|+ |++|.+++..|+..|.  .++.+++++.
T Consensus       113 q~~L~~~~VlvvG~-GglGs~va~~La~aGv--g~i~lvD~D~  152 (353)
T 3h5n_A          113 QDKLKNAKVVILGC-GGIGNHVSVILATSGI--GEIILIDNDQ  152 (353)
T ss_dssp             HHHHHTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEEECCB
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHhCCC--CeEEEECCCc
Confidence            44567789999995 7899999999999975  6888888754

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.45  E-value=0.0073  Score=45.50  Aligned_cols=73  Identities=22%  Similarity=0.311  Sum_probs=50.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +++|+|+| .|.+|+.+++.|.+.|+   .|++++++      .+++..+..               .++.++.+|.+++
T Consensus         4 ~~~viIiG-~Gr~G~~va~~L~~~g~---~vvvId~d------~~~v~~~~~---------------~g~~vi~GDat~~   58 (413)
T 3l9w_A            4 GMRVIIAG-FGRFGQITGRLLLSSGV---KMVVLDHD------PDHIETLRK---------------FGMKVFYGDATRM   58 (413)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTC---CEEEEECC------HHHHHHHHH---------------TTCCCEESCTTCH
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCC---CEEEEECC------HHHHHHHHh---------------CCCeEEEcCCCCH
Confidence            45789999 48899999999999986   55667754      233333322               3466788999885


Q ss_pred             CCCCChhHHHHH-hccccEEEeccc
Q psy11862         90 NLGIKDSDLLML-QEEVSVVFNGAA  113 (152)
Q Consensus        90 ~~~~~~~~~~~~-~~~~d~vi~~a~  113 (152)
                      +      .+.++ +.++|+||-+.+
T Consensus        59 ~------~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A           59 D------LLESAGAAKAEVLINAID   77 (413)
T ss_dssp             H------HHHHTTTTTCSEEEECCS
T ss_pred             H------HHHhcCCCccCEEEECCC
Confidence            4      35554 567888887653

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.43  E-value=0.011  Score=42.38  Aligned_cols=36  Identities=19%  Similarity=0.259  Sum_probs=30.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+.+++|+|++|++|..+++.+...|.   +|++.++++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga---~Vi~~~~~~  160 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAASRP  160 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSG
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence            578999999999999999988887774   788888754

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.39  E-value=0.11  Score=37.36  Aligned_cols=34  Identities=15%  Similarity=0.222  Sum_probs=28.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ++|.|.| +|.+|..++..|+..|. ...|.+++|+
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~   35 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDAN   35 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCC
Confidence            6899999 89999999999999873 2378888875

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.38  E-value=0.0049  Score=43.68  Aligned_cols=35  Identities=29%  Similarity=0.265  Sum_probs=30.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +++++++|+|+ |++|++++..|++.|.   +|++..|+
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~---~V~v~~R~  151 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDC---AVTITNRT  151 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCC---EEEEEECC
Confidence            56889999998 7899999999999984   77888875

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.37  E-value=0.0049  Score=41.71  Aligned_cols=33  Identities=30%  Similarity=0.360  Sum_probs=28.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |++.|+||+|.+|.++++.|.+.|+   .|.+++|+
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~---~V~~~~r~   33 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGH---EIVVGSRR   33 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCC---EEEEEeCC
Confidence            4789999999999999999999886   67777875

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.36  E-value=0.0042  Score=42.83  Aligned_cols=71  Identities=18%  Similarity=0.114  Sum_probs=47.8

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .++++|+|+ |.+|+.+++.|.+.|+    |+++++++.      .+..+.                .++.++.+|.+++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~----v~vid~~~~------~~~~~~----------------~~~~~i~gd~~~~   61 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV----FVLAEDENV------RKKVLR----------------SGANFVHGDPTRV   61 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE----EEEESCGGG------HHHHHH----------------TTCEEEESCTTCH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe----EEEEECCHH------HHHHHh----------------cCCeEEEcCCCCH
Confidence            458999996 8999999999988863    556665422      222211                2467888998875


Q ss_pred             CCCCChhHHHHH-hccccEEEeccc
Q psy11862         90 NLGIKDSDLLML-QEEVSVVFNGAA  113 (152)
Q Consensus        90 ~~~~~~~~~~~~-~~~~d~vi~~a~  113 (152)
                      +      .+.+. ++++|.+|.+.+
T Consensus        62 ~------~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A           62 S------DLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             H------HHHHTTCTTCSEEEECCS
T ss_pred             H------HHHhcCcchhcEEEEcCC
Confidence            4      45555 678898887643

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.35  E-value=0.013  Score=42.33  Aligned_cols=36  Identities=19%  Similarity=0.271  Sum_probs=28.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .-.+.+++|+||+|++|...+..+...|.   +|+..++
T Consensus       150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga---~vi~~~~  185 (321)
T 3tqh_A          150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGT---TVITTAS  185 (321)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEEC
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHcCC---EEEEEec
Confidence            34678999999999999998888877775   5666654

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.31  E-value=0.007  Score=45.00  Aligned_cols=35  Identities=20%  Similarity=0.085  Sum_probs=30.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.+++++|+|+ |.+|..+++.+...|.   +|++.+|+
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga---~V~~~d~~  200 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGA---TVTVLDIN  200 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCC
Confidence            67899999997 9999999999998885   77888875

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=96.26  E-value=0.013  Score=43.28  Aligned_cols=34  Identities=26%  Similarity=0.374  Sum_probs=27.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      .+.++.|.||+|++|.++++.|.++ +.+ .+..+.
T Consensus        12 ~~~~V~IvGAtG~vG~ellrlL~~h-P~~-el~~l~   45 (351)
T 1vkn_A           12 HMIRAGIIGATGYTGLELVRLLKNH-PEA-KITYLS   45 (351)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHC-TTE-EEEEEE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEe
Confidence            4678999999999999999999987 444 565554

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.26  E-value=0.022  Score=41.52  Aligned_cols=33  Identities=30%  Similarity=0.550  Sum_probs=27.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL   43 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~   43 (152)
                      -.+.+++|+||+|++|...+..+...|.   +|++.
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga---~Vi~~  181 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGA---RVFAT  181 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEE
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEE
Confidence            4678999999999999999988888875   56666

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.26  E-value=0.0062  Score=45.02  Aligned_cols=39  Identities=15%  Similarity=0.320  Sum_probs=28.3

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.|+.+++.|.||+|++|+.+++.|.++ +.+ .++.+.++
T Consensus        12 ~~M~~~kV~IiGAtG~iG~~llr~L~~~-p~~-elvai~~~   50 (359)
T 1xyg_A           12 KPEKDIRIGLLGASGYTGAEIVRLLANH-PHF-QVTLMTAD   50 (359)
T ss_dssp             ---CCEEEEEECCSSHHHHHHHHHHHTC-SSE-EEEEEBCS
T ss_pred             ccccCcEEEEECcCCHHHHHHHHHHHcC-CCc-EEEEEeCc
Confidence            3355578999999999999999999887 344 55555443

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.21  E-value=0.0092  Score=45.59  Aligned_cols=73  Identities=18%  Similarity=0.320  Sum_probs=50.7

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +.|+++|.| .|-+|+.+++.|.+.|+   .|.+++++      .++++.+..              .-++.++.||-++
T Consensus         2 ~~M~iiI~G-~G~vG~~la~~L~~~~~---~v~vId~d------~~~~~~~~~--------------~~~~~~i~Gd~~~   57 (461)
T 4g65_A            2 NAMKIIILG-AGQVGGTLAENLVGENN---DITIVDKD------GDRLRELQD--------------KYDLRVVNGHASH   57 (461)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHTCSTTE---EEEEEESC------HHHHHHHHH--------------HSSCEEEESCTTC
T ss_pred             CcCEEEEEC-CCHHHHHHHHHHHHCCC---CEEEEECC------HHHHHHHHH--------------hcCcEEEEEcCCC
Confidence            457899999 57899999999999887   56666653      333433321              1357788999988


Q ss_pred             CCCCCChhHHHHH-hccccEEEec
Q psy11862         89 ANLGIKDSDLLML-QEEVSVVFNG  111 (152)
Q Consensus        89 ~~~~~~~~~~~~~-~~~~d~vi~~  111 (152)
                      ++      -++++ ++.+|.+|-.
T Consensus        58 ~~------~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A           58 PD------VLHEAGAQDADMLVAV   75 (461)
T ss_dssp             HH------HHHHHTTTTCSEEEEC
T ss_pred             HH------HHHhcCCCcCCEEEEE
Confidence            65      34443 4678988854

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=96.15  E-value=0.0053  Score=45.31  Aligned_cols=37  Identities=24%  Similarity=0.322  Sum_probs=28.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCC----CCcEEEEeec
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCP----DIGKVYILCR   45 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~----~~~~v~~~~r   45 (152)
                      |++++|.|.||+|++|+.+++.|.++++    . ..+..+.+
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~-~ei~~l~s   47 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGR-LRIGALTA   47 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTS-EEEEEEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCcc-EEEEEEEC
Confidence            4567999999999999999999988741    2 35666654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.14  E-value=0.0032  Score=40.10  Aligned_cols=34  Identities=21%  Similarity=0.336  Sum_probs=28.3

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+++++|.|+ |.+|..+++.|...|.   .|.+.+|+
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~---~v~v~~r~   53 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQY---KVTVAGRN   53 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTC---EEEEEESC
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEcCC
Confidence            4789999995 9999999999988764   47778875

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.12  E-value=0.09  Score=37.79  Aligned_cols=105  Identities=16%  Similarity=0.152  Sum_probs=56.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++|.|+|+ |.+|..++..|+..|+ +..|+++++++      +++....     .++....+. .....+...   +  
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~------~~~~~~~-----~~l~~~~~~-~~~~~i~~~---~--   61 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDE------DRAQAEA-----EDIAHAAPV-SHGTRVWHG---G--   61 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHH-----HHHTTSCCT-TSCCEEEEE---C--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCH------HHHHHHH-----Hhhhhhhhh-cCCeEEEEC---C--
Confidence            47899997 9999999999998875 34788888752      1221110     011111100 012222211   1  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                             . +.++++|+||.+++.... .....+....|+.....+++...+.
T Consensus        62 -------~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  106 (304)
T 2v6b_A           62 -------H-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA  106 (304)
T ss_dssp             -------G-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHH
T ss_pred             -------H-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh
Confidence                   1 235789999999875432 2233345667777777777777664

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.10  E-value=0.11  Score=37.49  Aligned_cols=104  Identities=12%  Similarity=0.118  Sum_probs=62.7

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE-cccCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE-GDILQAN   90 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~   90 (152)
                      +|.|+|+ |.+|..++..++..+.  ..++++++++.  .+.-...++.         ...........+.. .|     
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l--~el~L~Di~~~--~~~g~~~dl~---------~~~~~~~~~~~i~~t~d-----   61 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGY--DDLLLIARTPG--KPQGEALDLA---------HAAAELGVDIRISGSNS-----   61 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSSTT--HHHHHHHHHH---------HHHHHHTCCCCEEEESC-----
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCChh--hHHHHHHHHH---------HhhhhcCCCeEEEECCC-----
Confidence            5789998 9999999999988865  46888887642  1211111111         10000011221221 22     


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                             . +.++++|+||..++.... .....+....|+.-...+++...+.
T Consensus        62 -------~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~  106 (308)
T 2d4a_B           62 -------Y-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY  106 (308)
T ss_dssp             -------G-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------H-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence                   2 245789999999886542 3344456778888888888887765

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.10  E-value=0.028  Score=43.02  Aligned_cols=39  Identities=15%  Similarity=0.320  Sum_probs=28.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhC-CCCcEEEEeecCCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSC-PDIGKVYILCRAKRGL   50 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g-~~~~~v~~~~r~~~~~   50 (152)
                      ++|+|.| .|++|+.+++.|++.. .....|.+.+......
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~   53 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV   53 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh
Confidence            5688889 8999999999999873 2224677777655433

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.08  E-value=0.11  Score=37.53  Aligned_cols=107  Identities=12%  Similarity=-0.019  Sum_probs=62.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|.|+|+ |.+|..++..|...+. ...|.++++++.   ..+.+..-..+...    .  .....++.. ..|     
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~-g~~V~l~D~~~~---~~~~~~~~l~~~~~----~--~~~~~~i~~-t~d-----   63 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEG---IPQGKALDMYESGP----V--GLFDTKVTG-SND-----   63 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSS---HHHHHHHHHHTTHH----H--HTCCCEEEE-ESC-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChh---HHHHHHHhHHhhhh----c--ccCCcEEEE-CCC-----
Confidence            47889997 9999999999988532 137888888643   12222110011000    0  000111111 112     


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                             ... ++++|+||-+++.... .....++...|+.....+.+...+.
T Consensus        64 -------~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~  108 (310)
T 1guz_A           64 -------YAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH  108 (310)
T ss_dssp             -------GGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------HHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                   222 5789999999875432 2234567778888888888877765

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.08  E-value=0.04  Score=40.43  Aligned_cols=38  Identities=18%  Similarity=0.222  Sum_probs=31.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+++.+|+|.| .|++|.++++.|+..|.  .++.+++++.
T Consensus        31 kL~~~~VlIvG-aGGlGs~va~~La~aGV--g~ItlvD~D~   68 (340)
T 3rui_A           31 IIKNTKVLLLG-AGTLGCYVSRALIAWGV--RKITFVDNGT   68 (340)
T ss_dssp             HHHTCEEEEEC-CSHHHHHHHHHHHHTTC--CEEEEECCCB
T ss_pred             HHhCCEEEEEC-CCHHHHHHHHHHHHcCC--CEEEEecCCE
Confidence            45678999999 67899999999999865  6888888754

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.05  E-value=0.036  Score=40.19  Aligned_cols=38  Identities=21%  Similarity=0.190  Sum_probs=31.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..+|++.
T Consensus       136 ~l~g~tvGIiG-~G~IG~~vA~~l~~~G~---~V~~~dr~~~  173 (315)
T 3pp8_A          136 TREEFSVGIMG-AGVLGAKVAESLQAWGF---PLRCWSRSRK  173 (315)
T ss_dssp             CSTTCCEEEEC-CSHHHHHHHHHHHTTTC---CEEEEESSCC
T ss_pred             CcCCCEEEEEe-eCHHHHHHHHHHHHCCC---EEEEEcCCch
Confidence            36789999998 79999999999998886   6677887654

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=96.04  E-value=0.0051  Score=45.22  Aligned_cols=35  Identities=26%  Similarity=0.290  Sum_probs=27.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      +.++.|.|++|++|..+++.|.++.+....+..++
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~   35 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA   35 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence            46899999999999999998887644444566665

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.02  E-value=0.092  Score=37.62  Aligned_cols=37  Identities=16%  Similarity=0.174  Sum_probs=32.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +.++++.|.| .|.+|+.+++.+...|.   +|+..+|++.
T Consensus       120 l~g~tvGIIG-lG~IG~~vA~~l~~~G~---~V~~~dr~~~  156 (290)
T 3gvx_A          120 LYGKALGILG-YGGIGRRVAHLAKAFGM---RVIAYTRSSV  156 (290)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHHTC---EEEEECSSCC
T ss_pred             eecchheeec-cCchhHHHHHHHHhhCc---EEEEEecccc
Confidence            6789999998 89999999999999986   7788888754

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.01  E-value=0.013  Score=46.12  Aligned_cols=38  Identities=18%  Similarity=0.218  Sum_probs=31.1

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.+++.+|+|.| .|++|.++++.|+..|.  .++.+++.+
T Consensus       323 ~kL~~~kVLIVG-aGGLGs~va~~La~aGV--G~ItLvD~D  360 (598)
T 3vh1_A          323 DIIKNTKVLLLG-AGTLGCYVSRALIAWGV--RKITFVDNG  360 (598)
T ss_dssp             HHHHTCEEEEEC-CSHHHHHHHHHHHTTTC--CEEEEECCS
T ss_pred             HHHhCCeEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCC
Confidence            345678999999 67899999999999864  688888765

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.01  E-value=0.016  Score=43.42  Aligned_cols=37  Identities=30%  Similarity=0.424  Sum_probs=31.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++++|.|+ |.+|..+++.+...|.  .+|++.+|+.
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~--~~V~v~~r~~  201 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY  201 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence            57899999997 9999999999998875  4788888753

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.97  E-value=0.019  Score=42.30  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=28.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+.+++|+|+ |++|...++.+...|.   +|++.++++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~  221 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGS---KVTVISTSP  221 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence            6789999996 9999999988877774   677777653

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.96  E-value=0.055  Score=41.08  Aligned_cols=42  Identities=19%  Similarity=0.180  Sum_probs=31.6

Q ss_pred             CcccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          1 MGDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         1 ~~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |..+.+ ++++++.|.|. |..|.++++.|.++|+   .|...+++.
T Consensus         1 m~~~~~-~~~k~v~viG~-G~sG~s~A~~l~~~G~---~V~~~D~~~   42 (451)
T 3lk7_A            1 MKTITT-FENKKVLVLGL-ARSGEAAARLLAKLGA---IVTVNDGKP   42 (451)
T ss_dssp             ---CCT-TTTCEEEEECC-TTTHHHHHHHHHHTTC---EEEEEESSC
T ss_pred             Ccchhh-cCCCEEEEEee-CHHHHHHHHHHHhCCC---EEEEEeCCc
Confidence            333433 57899999997 7899999999999997   677777654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=95.89  E-value=0.027  Score=41.11  Aligned_cols=35  Identities=29%  Similarity=0.327  Sum_probs=28.7

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+.+++|+|+ |++|...++.+...|.  .+|++.+++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~  201 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGA--YPVIVSEPS  201 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence            6789999999 9999999988877775  367777764

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=95.86  E-value=0.012  Score=43.10  Aligned_cols=34  Identities=26%  Similarity=0.331  Sum_probs=27.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      +++.|.||+|.+|+.+++.|.++++....++.+.
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~   40 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   40 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            5899999999999999999987655555565554

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.86  E-value=0.035  Score=39.67  Aligned_cols=37  Identities=16%  Similarity=0.317  Sum_probs=30.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .++|++++|.|+++.+|+.++..|+..|.   .|.++.|.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA---tVtv~h~~  193 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGA---TVSVCHIK  193 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCC
Confidence            36899999999999999999999999974   56666543

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=95.84  E-value=0.0065  Score=47.10  Aligned_cols=35  Identities=34%  Similarity=0.373  Sum_probs=26.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +++++++|||+ |++|++++..|++.|.   +|++..|+
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~---~V~i~~R~  396 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGA---KVVIANRT  396 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC----CEEEESS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECC
Confidence            56789999998 6999999999999986   56777775

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.83  E-value=0.32  Score=35.26  Aligned_cols=107  Identities=13%  Similarity=0.052  Sum_probs=59.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .++|.|+|+ |.+|..++..|+..|.  ..|+++++++.  . .+.......+...    .  .....++... .|    
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~--~~v~L~Di~~~--~-l~~~~~~l~~~~~----~--~~~~~~i~~t-~d----   66 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNL--GDVVLFDIVKN--M-PHGKALDTSHTNV----M--AYSNCKVSGS-NT----   66 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSSS--H-HHHHHHHHHTHHH----H--HTCCCCEEEE-CC----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeCCHH--H-HHHHHHHHHhhhh----h--cCCCcEEEEC-CC----
Confidence            468999997 9999999999999875  24788887542  1 2211111111100    0  0001122211 22    


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccchh-h-----HHHHHHhhhHHHHHHHHHHHhc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLEA-E-----LKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~-~-----~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                              + +.++++|+||.+++....+. .     ..++...|+.....+.+...+.
T Consensus        67 --------~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~  116 (322)
T 1t2d_A           67 --------Y-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN  116 (322)
T ss_dssp             --------G-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             --------H-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence                    3 34678999999997643211 1     2234555666666666666554

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.82  E-value=0.098  Score=38.08  Aligned_cols=38  Identities=24%  Similarity=0.260  Sum_probs=32.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..+|++.
T Consensus       134 ~l~gktvGIiG-lG~IG~~vA~~l~~~G~---~V~~~dr~~~  171 (324)
T 3evt_A          134 TLTGQQLLIYG-TGQIGQSLAAKASALGM---HVIGVNTTGH  171 (324)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSCC
T ss_pred             cccCCeEEEEC-cCHHHHHHHHHHHhCCC---EEEEECCCcc
Confidence            36789999998 89999999999999886   7788888754

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=95.80  E-value=0.044  Score=40.17  Aligned_cols=37  Identities=19%  Similarity=0.114  Sum_probs=29.1

Q ss_pred             cCC-ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAG-RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~-~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      -.+ .+++|+|++|++|...+..+...|.   ++++.+++.
T Consensus       165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga---~vi~~~~~~  202 (364)
T 1gu7_A          165 TPGKDWFIQNGGTSAVGKYASQIGKLLNF---NSISVIRDR  202 (364)
T ss_dssp             CTTTCEEEESCTTSHHHHHHHHHHHHHTC---EEEEEECCC
T ss_pred             CCCCcEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCc
Confidence            356 8999999999999998887777774   667776544

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=95.78  E-value=0.044  Score=39.97  Aligned_cols=35  Identities=17%  Similarity=0.284  Sum_probs=29.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+.+++|+||+|++|...+..+...|.   +|++.+++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga---~Vi~~~~~  184 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGL---RVITTASR  184 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCC
Confidence            688999999999999998888877774   77877764

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=95.74  E-value=0.01  Score=42.35  Aligned_cols=34  Identities=12%  Similarity=0.230  Sum_probs=29.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +++++++|+|++ ++|++++..|++.|    +|++..|+
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G----~V~v~~r~  159 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN----NIIIANRT  159 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS----EEEEECSS
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC----CEEEEECC
Confidence            578999999986 99999999999987    56677775

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.74  E-value=0.016  Score=41.36  Aligned_cols=37  Identities=24%  Similarity=0.419  Sum_probs=31.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++++|+|+ |++|++++..|.+.|.  .+|++..|+.
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~  160 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQP--ASITVTNRTF  160 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCC--SEEEEEESSH
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCC--CeEEEEECCH
Confidence            56899999997 7899999999999874  4788888863

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.67  E-value=0.12  Score=37.99  Aligned_cols=37  Identities=16%  Similarity=0.219  Sum_probs=31.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..+|++
T Consensus       170 ~l~gktvGIIG-lG~IG~~vA~~l~~~G~---~V~~~dr~~  206 (345)
T 4g2n_A          170 GLTGRRLGIFG-MGRIGRAIATRARGFGL---AIHYHNRTR  206 (345)
T ss_dssp             CCTTCEEEEES-CSHHHHHHHHHHHTTTC---EEEEECSSC
T ss_pred             ccCCCEEEEEE-eChhHHHHHHHHHHCCC---EEEEECCCC
Confidence            46789999999 89999999999998875   778888865

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=95.66  E-value=0.012  Score=41.77  Aligned_cols=36  Identities=25%  Similarity=0.289  Sum_probs=30.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++++|+|+ |++|++++..|++.|.   +|++..|+.
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~---~v~v~~R~~  152 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQ---NIVLANRTF  152 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTC---EEEEEESSH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECCH
Confidence            46789999997 7899999999999983   788888853

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.66  E-value=0.018  Score=40.96  Aligned_cols=37  Identities=27%  Similarity=0.326  Sum_probs=31.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++++|+|+ |++|++++..|.+.|.  .+|++..|+.
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~--~~v~i~~R~~  154 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGP--SELVIANRDM  154 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCC--SEEEEECSCH
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence            56899999996 7899999999999874  5788888853

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.64  E-value=0.026  Score=44.49  Aligned_cols=38  Identities=18%  Similarity=0.222  Sum_probs=31.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+++.+|+|.| .|++|.++++.|+..|.  .++.+++.+.
T Consensus       323 kL~~arVLIVG-aGGLGs~vA~~La~aGV--G~ItLvD~D~  360 (615)
T 4gsl_A          323 IIKNTKVLLLG-AGTLGCYVSRALIAWGV--RKITFVDNGT  360 (615)
T ss_dssp             HHHTCEEEEEC-CSHHHHHHHHHHHHTTC--CEEEEECCCB
T ss_pred             HHhCCeEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCCC
Confidence            45678999999 67899999999999865  6888888765

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.63  E-value=0.072  Score=39.25  Aligned_cols=34  Identities=26%  Similarity=0.189  Sum_probs=27.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      -.+.+++|+|++|.+|...+..+...|.   +|+...
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga---~Vi~~~  196 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGY---IPIATC  196 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCC---EEEEEe
Confidence            4678999999999999998888777775   556554

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.63  E-value=0.088  Score=38.78  Aligned_cols=95  Identities=18%  Similarity=0.203  Sum_probs=53.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.++++.|.| .|.||+.+++.|...|.   +|+..+|++..   .+......... ...+....  ...++.++.+.++
T Consensus       162 l~gktvGIIG-~G~IG~~vA~~l~~~G~---~V~~~dr~~~~---~~~~~~~g~~~-~~~l~ell--~~aDvV~l~~Plt  231 (351)
T 3jtm_A          162 LEGKTIGTVG-AGRIGKLLLQRLKPFGC---NLLYHDRLQMA---PELEKETGAKF-VEDLNEML--PKCDVIVINMPLT  231 (351)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGGCC---EEEEECSSCCC---HHHHHHHCCEE-CSCHHHHG--GGCSEEEECSCCC
T ss_pred             ccCCEEeEEE-eCHHHHHHHHHHHHCCC---EEEEeCCCccC---HHHHHhCCCeE-cCCHHHHH--hcCCEEEECCCCC
Confidence            6789999998 78999999999999885   67888876532   11122111000 00001000  1246666666655


Q ss_pred             CCCCCCChhHHHHHhccccEEEecc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      +...++-..+..+.++.-.++||.+
T Consensus       232 ~~t~~li~~~~l~~mk~gailIN~a  256 (351)
T 3jtm_A          232 EKTRGMFNKELIGKLKKGVLIVNNA  256 (351)
T ss_dssp             TTTTTCBSHHHHHHSCTTEEEEECS
T ss_pred             HHHHHhhcHHHHhcCCCCCEEEECc
Confidence            4433232334445555556667665

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=95.58  E-value=0.018  Score=42.62  Aligned_cols=40  Identities=25%  Similarity=0.317  Sum_probs=28.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecCCCCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRAKRGLT   51 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~~~~~~   51 (152)
                      ..++.|.|++|++|.++++.|.++ +.+ .+..+ +++..+..
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~-el~~l~S~~saGk~   47 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNH-PYI-KPAYLAGKGSVGKP   47 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTC-SSE-EEEEEEESTTTTSB
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEECchhcCCC
Confidence            468999999999999999977665 444 55544 44444343

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=95.58  E-value=0.018  Score=42.62  Aligned_cols=40  Identities=25%  Similarity=0.317  Sum_probs=28.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecCCCCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRAKRGLT   51 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~~~~~~   51 (152)
                      ..++.|.|++|++|.++++.|.++ +.+ .+..+ +++..+..
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~-el~~l~S~~saGk~   47 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNH-PYI-KPAYLAGKGSVGKP   47 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTC-SSE-EEEEEEESTTTTSB
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEECchhcCCC
Confidence            468999999999999999977665 444 55544 44444343

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=95.56  E-value=0.068  Score=40.55  Aligned_cols=37  Identities=19%  Similarity=0.236  Sum_probs=29.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .-.+.+++|+|++|++|...+..+...|.   ++++.+++
T Consensus       226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga---~vi~~~~~  262 (456)
T 3krt_A          226 MKQGDNVLIWGASGGLGSYATQFALAGGA---NPICVVSS  262 (456)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCC---eEEEEECC
Confidence            34678999999999999998888877774   66776653

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=95.55  E-value=0.062  Score=39.39  Aligned_cols=37  Identities=22%  Similarity=0.266  Sum_probs=30.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      -.+.+++|+|+ |++|...+..+...|.   +|++.++++.
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga---~Vi~~~~~~~  214 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGA---ETYVISRSSR  214 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSST
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEcCCHH
Confidence            36789999999 9999998888777775   6888887644

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.51  E-value=0.098  Score=38.26  Aligned_cols=34  Identities=24%  Similarity=0.229  Sum_probs=26.2

Q ss_pred             ceEEEcCCcchhHHHH-HHHH-HhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVL-LEKL-LRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l-~~~l-~~~g~~~~~v~~~~r~~   47 (152)
                      .+++|+|+ |++|... +..+ ...|.  .+|++.++++
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga--~~Vi~~~~~~  209 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGY--ENLYCLGRRD  209 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCC--CEEEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCC--cEEEEEeCCc
Confidence            89999999 9999998 6666 55564  3488888754

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.45  E-value=0.042  Score=43.65  Aligned_cols=39  Identities=28%  Similarity=0.325  Sum_probs=31.7

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+...+|+|.| .|++|.++++.|+..|.  ..+.+++.+.
T Consensus        13 ~kL~~s~VlVVG-aGGLGsevak~La~aGV--G~ItlvD~D~   51 (640)
T 1y8q_B           13 EAVAGGRVLVVG-AGGIGCELLKNLVLTGF--SHIDLIDLDT   51 (640)
T ss_dssp             HHHHHCEEEEEC-CSHHHHHHHHHHHHHTC--CEEEEEECCB
T ss_pred             HHHhcCeEEEEC-cCHHHHHHHHHHHHcCC--CeEEEecCCE
Confidence            445667999999 58899999999999975  6888888654

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=95.41  E-value=0.074  Score=38.74  Aligned_cols=38  Identities=29%  Similarity=0.351  Sum_probs=32.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..+|++.
T Consensus       137 ~l~g~tvGIIG-lG~IG~~vA~~l~~~G~---~V~~~dr~~~  174 (324)
T 3hg7_A          137 GLKGRTLLILG-TGSIGQHIAHTGKHFGM---KVLGVSRSGR  174 (324)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred             ccccceEEEEE-ECHHHHHHHHHHHhCCC---EEEEEcCChH
Confidence            46789999999 89999999999998885   7788888753

>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}

Probab=95.38  E-value=0.16  Score=37.16  Aligned_cols=86  Identities=21%  Similarity=0.110  Sum_probs=56.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHH------HHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKA------RLAEFSKLPVFERLRKECPAQLSRLHI   81 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|++.++..... ..+      .+.++.+              ..++..
T Consensus       139 l~g~tvGIiG-~G~IG~~va~~~~~fg~---~v~~~d~~~~~~-~~~~~~~~~~l~ell~--------------~sDivs  199 (334)
T 3kb6_A          139 LNRLTLGVIG-TGRIGSRVAMYGLAFGM---KVLCYDVVKRED-LKEKGCVYTSLDELLK--------------ESDVIS  199 (334)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCCHH-HHHTTCEECCHHHHHH--------------HCSEEE
T ss_pred             ecCcEEEEEC-cchHHHHHHHhhcccCc---eeeecCCccchh-hhhcCceecCHHHHHh--------------hCCEEE
Confidence            5678999988 89999999999988875   777877654310 000      1111111              167888


Q ss_pred             EEcccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         82 IEGDILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        82 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      +.+.+++...++-..+..+.+++--++||.+
T Consensus       200 lh~Plt~~T~~li~~~~l~~mk~~a~lIN~a  230 (334)
T 3kb6_A          200 LHVPYTKETHHMINEERISLMKDGVYLINTA  230 (334)
T ss_dssp             ECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred             EcCCCChhhccCcCHHHHhhcCCCeEEEecC
Confidence            8888887665555445556666666777766

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.36  E-value=0.041  Score=40.43  Aligned_cols=38  Identities=16%  Similarity=0.204  Sum_probs=30.6

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ..+...+|+|.| .|++|.++++.|+..|.  ..+.+++.+
T Consensus        32 ~~L~~~~VlivG-~GGlG~~ia~~La~~Gv--g~itlvD~d   69 (346)
T 1y8q_A           32 KRLRASRVLLVG-LKGLGAEIAKNLILAGV--KGLTMLDHE   69 (346)
T ss_dssp             HHHHTCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECCC
T ss_pred             HHHhCCeEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEECC
Confidence            345678999999 57899999999999975  688888644

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.36  E-value=0.072  Score=38.06  Aligned_cols=36  Identities=25%  Similarity=0.296  Sum_probs=30.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .++|++++|.|.++-+|+.++..|...|.   .|.++.|
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA---tVtv~hs  193 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKA---TVTTCHR  193 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEECT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEEeC
Confidence            36899999999999999999999999874   5655554

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=95.35  E-value=0.17  Score=37.07  Aligned_cols=38  Identities=21%  Similarity=0.181  Sum_probs=32.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .+.++++.|.| .|.+|+.+++.+...|.   +|+..+|++.
T Consensus       168 ~l~gktiGIIG-lG~IG~~vA~~l~~~G~---~V~~~dr~~~  205 (340)
T 4dgs_A          168 SPKGKRIGVLG-LGQIGRALASRAEAFGM---SVRYWNRSTL  205 (340)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECSSCC
T ss_pred             cccCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEcCCcc
Confidence            46789999999 69999999999998885   6788888754

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=95.32  E-value=0.2  Score=36.46  Aligned_cols=37  Identities=19%  Similarity=0.041  Sum_probs=31.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..+|+..
T Consensus       144 l~g~~vgIiG-~G~IG~~~A~~l~~~G~---~V~~~d~~~~  180 (331)
T 1xdw_A          144 VRNCTVGVVG-LGRIGRVAAQIFHGMGA---TVIGEDVFEI  180 (331)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCC---EEEEECCCcc
Confidence            5788999998 79999999999998885   6788887654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.30  E-value=0.085  Score=37.96  Aligned_cols=36  Identities=22%  Similarity=0.354  Sum_probs=30.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .++|++++|.|.++-+|+.++..|+..|.   .|.++.|
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA---tVtv~~~  197 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENA---TVTIVHS  197 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEECT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeC
Confidence            36899999999999999999999999975   5666665

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.28  E-value=0.07  Score=38.13  Aligned_cols=35  Identities=23%  Similarity=0.339  Sum_probs=29.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      ++|++++|.|.++-+|+.++..|...|.   .|.++.+
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~~gA---tVtv~hs  193 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLLGGC---TVTVTHR  193 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHHTTC---EEEEECT
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEEeC
Confidence            6899999999999999999999999874   5555554

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=95.24  E-value=0.11  Score=37.85  Aligned_cols=35  Identities=29%  Similarity=0.263  Sum_probs=27.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+.+++|+|+ |++|...+..+...|.   +|++.+++
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~  201 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGA---FVVCTARS  201 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEcCC
Confidence            46789999996 9999998887777775   57777754

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.18  E-value=0.021  Score=40.16  Aligned_cols=35  Identities=20%  Similarity=0.369  Sum_probs=29.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +++ +++|.|+ |+.|++++..|.+.|.  ..|++..|+
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~--~~I~v~nR~  141 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGV--KDIWVVNRT  141 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTC--CCEEEEESC
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCC
Confidence            356 8999995 8899999999999875  478888885

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=95.17  E-value=0.25  Score=36.23  Aligned_cols=86  Identities=14%  Similarity=0.091  Sum_probs=52.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHH-----HHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKA-----RLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..+|+.... ...     .+.++.+              ..++.+.
T Consensus       146 l~gktvgIiG-lG~IG~~vA~~l~~~G~---~V~~~d~~~~~~-~~~~~~~~~l~ell~--------------~aDvV~l  206 (343)
T 2yq5_A          146 IYNLTVGLIG-VGHIGSAVAEIFSAMGA---KVIAYDVAYNPE-FEPFLTYTDFDTVLK--------------EADIVSL  206 (343)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCCGG-GTTTCEECCHHHHHH--------------HCSEEEE
T ss_pred             cCCCeEEEEe-cCHHHHHHHHHHhhCCC---EEEEECCChhhh-hhccccccCHHHHHh--------------cCCEEEE
Confidence            5688999998 79999999999998885   788888875421 000     1111111              1466666


Q ss_pred             EcccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         83 EGDILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        83 ~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .+.++....++-..+..+.++.--++||.+
T Consensus       207 ~~Plt~~t~~li~~~~l~~mk~gailIN~a  236 (343)
T 2yq5_A          207 HTPLFPSTENMIGEKQLKEMKKSAYLINCA  236 (343)
T ss_dssp             CCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             cCCCCHHHHHHhhHHHHhhCCCCcEEEECC
Confidence            666654433232233445555556777766

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=95.16  E-value=0.2  Score=36.50  Aligned_cols=38  Identities=24%  Similarity=0.188  Sum_probs=32.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..+|+..
T Consensus       142 ~l~g~~vgIiG-~G~IG~~~A~~l~~~G~---~V~~~d~~~~  179 (333)
T 1dxy_A          142 ELGQQTVGVMG-TGHIGQVAIKLFKGFGA---KVIAYDPYPM  179 (333)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCC---EEEEECCCcc
Confidence            36788999998 79999999999998885   7788888654

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.14  E-value=0.48  Score=34.42  Aligned_cols=35  Identities=20%  Similarity=0.340  Sum_probs=28.8

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .++|.|+|+ |.+|..++..|+..|+  ..|.+.++++
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~--~~V~L~Di~~   48 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDL--GDVYMFDIIE   48 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSST
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEECCH
Confidence            358999997 9999999999999876  2588888764

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.13  E-value=0.033  Score=40.49  Aligned_cols=69  Identities=19%  Similarity=0.120  Sum_probs=48.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++++|+|. |.+|+.+++.|.+.|+    +.++++++.      +++ +..               .++.++.+|.++++
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~----v~vid~~~~------~~~-~~~---------------~~~~~i~gd~~~~~  168 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV----FVLAEDENV------RKK-VLR---------------SGANFVHGDPTRVS  168 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE----EEEESCGGG------HHH-HHH---------------TTCEEEESCTTSHH
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc----EEEEeCChh------hhh-HHh---------------CCcEEEEeCCCCHH
Confidence            47999995 9999999999998863    555555432      222 111               45778999998854


Q ss_pred             CCCChhHHHHH-hccccEEEecc
Q psy11862         91 LGIKDSDLLML-QEEVSVVFNGA  112 (152)
Q Consensus        91 ~~~~~~~~~~~-~~~~d~vi~~a  112 (152)
                            .+.++ ++++|.++-+.
T Consensus       169 ------~L~~a~i~~a~~vi~~~  185 (336)
T 1lnq_A          169 ------DLEKANVRGARAVIVDL  185 (336)
T ss_dssp             ------HHHHTCSTTEEEEEECC
T ss_pred             ------HHHhcChhhccEEEEcC
Confidence                  46655 66888888654

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=95.07  E-value=0.029  Score=41.18  Aligned_cols=34  Identities=21%  Similarity=0.443  Sum_probs=27.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      +++|.|.|++|++|+.+++.|.++ +.+ .++.+.+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-elv~v~s   37 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSH-PYL-EVKQVTS   37 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTC-TTE-EEEEEBC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEEC
Confidence            478999999999999999999876 343 5555554

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.03  E-value=0.17  Score=36.76  Aligned_cols=37  Identities=19%  Similarity=0.270  Sum_probs=31.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+.+++++|.|++.-+|+.+++.|+..|.   .|.++.|+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gA---tVtv~nR~  210 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGA---TVYSVDVN  210 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSC---EEEEECSS
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCC---EEEEEeCc
Confidence            46889999999888899999999999873   67777664

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=95.01  E-value=0.033  Score=42.79  Aligned_cols=35  Identities=23%  Similarity=0.213  Sum_probs=30.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.+++++|||++ +||+.+++.|...|.   +|++.+++
T Consensus       263 L~GKtVvVtGaG-gIG~aiA~~Laa~GA---~Viv~D~~  297 (488)
T 3ond_A          263 IAGKVAVVAGYG-DVGKGCAAALKQAGA---RVIVTEID  297 (488)
T ss_dssp             CTTCEEEEECCS-HHHHHHHHHHHHTTC---EEEEECSC
T ss_pred             ccCCEEEEECCC-HHHHHHHHHHHHCCC---EEEEEcCC
Confidence            689999999976 999999999999985   67777764

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=95.00  E-value=0.34  Score=34.99  Aligned_cols=38  Identities=18%  Similarity=0.261  Sum_probs=32.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .+.++++.|.| .|.+|+.+++.+...|.   +|+..+|+..
T Consensus       141 ~l~g~~vgIIG-~G~IG~~~A~~l~~~G~---~V~~~d~~~~  178 (311)
T 2cuk_A          141 DLQGLTLGLVG-MGRIGQAVAKRALAFGM---RVVYHARTPK  178 (311)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred             CCCCCEEEEEE-ECHHHHHHHHHHHHCCC---EEEEECCCCc
Confidence            46789999998 79999999999998885   6788888764

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=94.98  E-value=0.68  Score=33.40  Aligned_cols=105  Identities=16%  Similarity=0.058  Sum_probs=59.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|.|.|+ |.+|..++..|+..|+ ...|.++++++.      .+.....     ++...... .....+..   ++. 
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~~------~~~~~~~-----~l~~~~~~-~~~~~i~~---~d~-   62 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKK------RAEGDAL-----DLIHGTPF-TRRANIYA---GDY-   62 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH------HHHHHHH-----HHHHHGGG-SCCCEEEE---CCG-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChH------HHHHHHH-----HHHhhhhh-cCCcEEEe---CCH-
Confidence            47889997 9999999999999886 347888887531      2221110     00000000 01111111   121 


Q ss_pred             CCCChhHHHHHhccccEEEeccccccch-hhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLE-AELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                               ..++++|+||-+++....+ ....++...|+.....+++...+.
T Consensus        63 ---------~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  106 (319)
T 1a5z_A           63 ---------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY  106 (319)
T ss_dssp             ---------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence                     1346899999998765422 123345666777777777766654

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=94.94  E-value=0.04  Score=40.29  Aligned_cols=35  Identities=26%  Similarity=0.434  Sum_probs=27.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      ++++.|.||+|.+|+.+++.|.++++....++.+.
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~   37 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA   37 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence            57899999999999999999988742223555554

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=94.94  E-value=0.09  Score=39.28  Aligned_cols=33  Identities=36%  Similarity=0.525  Sum_probs=27.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      |.+++|+|.|+ |.+|+.+++++.+.|+   ++++++
T Consensus        22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~---~v~~~d   54 (403)
T 3k5i_A           22 WNSRKVGVLGG-GQLGRMLVESANRLNI---QVNVLD   54 (403)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEE
Confidence            45789999995 6799999999999997   566666

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=94.92  E-value=0.52  Score=33.92  Aligned_cols=35  Identities=20%  Similarity=0.237  Sum_probs=29.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .++|.|.|+ |.+|..++..|+..|+  ..|+++++++
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~--~~V~l~D~~~   38 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNL--ADVVLFDIAE   38 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCc
Confidence            368999997 9999999999999875  2588888764

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=94.88  E-value=0.099  Score=38.72  Aligned_cols=37  Identities=22%  Similarity=0.223  Sum_probs=31.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..+|+.
T Consensus       173 ~l~gktvGIIG-lG~IG~~vA~~l~~fG~---~V~~~d~~~  209 (365)
T 4hy3_A          173 LIAGSEIGIVG-FGDLGKALRRVLSGFRA---RIRVFDPWL  209 (365)
T ss_dssp             CSSSSEEEEEC-CSHHHHHHHHHHTTSCC---EEEEECSSS
T ss_pred             ccCCCEEEEec-CCcccHHHHHhhhhCCC---EEEEECCCC
Confidence            36789999998 89999999999988875   778888763

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=94.84  E-value=0.049  Score=39.03  Aligned_cols=37  Identities=27%  Similarity=0.447  Sum_probs=28.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..+|.|.|++|.+|+.+++.+.+. +++.-+-+++|+.
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~   57 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKG   57 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence            358999999999999999998876 4554455556653

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=94.81  E-value=0.14  Score=38.07  Aligned_cols=36  Identities=25%  Similarity=0.375  Sum_probs=27.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+.+++|+|+ |++|...+..+...|.  .+|++.+++
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~  247 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGA--SKVILSEPS  247 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence            46789999998 9999998877776764  477777654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=94.78  E-value=0.15  Score=36.99  Aligned_cols=35  Identities=20%  Similarity=0.188  Sum_probs=27.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+.+++|+|+ |++|...+..+...|.   +|++.+++
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~  199 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGL---RVAAVDID  199 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTC---EEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEeCC
Confidence            46789999996 8899998887777774   77887764

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=94.78  E-value=0.038  Score=41.20  Aligned_cols=42  Identities=21%  Similarity=0.298  Sum_probs=29.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe--ecCCCCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL--CRAKRGLT   51 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~--~r~~~~~~   51 (152)
                      |++.+|.|.|++|++|.++++.|.++ +. ..+..+  +++..+..
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~h-p~-~el~~l~aS~~saGk~   60 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKH-PE-FEIHALGASSRSAGKK   60 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTC-SS-EEEEEEEECTTTTTSB
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcC-CC-ceEEEeeccccccCCC
Confidence            56678999999999999999988776 33 466444  34444343

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=94.75  E-value=0.15  Score=36.77  Aligned_cols=37  Identities=24%  Similarity=0.260  Sum_probs=31.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +.++++.|.| .|.+|+.+++.+...|.   +|+..+|+..
T Consensus       122 l~g~~vgIIG-~G~IG~~~A~~l~~~G~---~V~~~dr~~~  158 (303)
T 1qp8_A          122 IQGEKVAVLG-LGEIGTRVGKILAALGA---QVRGFSRTPK  158 (303)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred             CCCCEEEEEc-cCHHHHHHHHHHHHCCC---EEEEECCCcc
Confidence            6789999998 79999999999998885   6788887654

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=94.73  E-value=0.12  Score=35.50  Aligned_cols=35  Identities=26%  Similarity=0.398  Sum_probs=28.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .+++++++|.| +|-+|..-++.|++.|.   .|.+++.
T Consensus        28 ~L~gk~VLVVG-gG~va~~ka~~Ll~~GA---~VtVvap   62 (223)
T 3dfz_A           28 DLKGRSVLVVG-GGTIATRRIKGFLQEGA---AITVVAP   62 (223)
T ss_dssp             CCTTCCEEEEC-CSHHHHHHHHHHGGGCC---CEEEECS
T ss_pred             EcCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEECC
Confidence            37889999999 56899999999999986   4555554

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=94.71  E-value=0.17  Score=37.50  Aligned_cols=37  Identities=19%  Similarity=0.304  Sum_probs=29.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+.+++++|.| +|.+|+.+++++.+.|+   ++++++..+
T Consensus        11 ~~~~k~IlIlG-~G~~g~~la~aa~~~G~---~vi~~d~~~   47 (389)
T 3q2o_A           11 ILPGKTIGIIG-GGQLGRMMALAAKEMGY---KIAVLDPTK   47 (389)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESST
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCC---EEEEEeCCC
Confidence            35788999998 55699999999999987   567776543

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=94.71  E-value=0.43  Score=34.42  Aligned_cols=38  Identities=18%  Similarity=0.047  Sum_probs=31.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .+.++++.|.| .|.+|+.+++.+...|.   +|+..+|+..
T Consensus       139 ~l~g~~vgIIG-~G~IG~~~A~~l~~~G~---~V~~~d~~~~  176 (313)
T 2ekl_A          139 ELAGKTIGIVG-FGRIGTKVGIIANAMGM---KVLAYDILDI  176 (313)
T ss_dssp             CCTTCEEEEES-CSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHHCCC---EEEEECCCcc
Confidence            36789999998 79999999999998885   7788887654

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=94.69  E-value=0.11  Score=39.30  Aligned_cols=36  Identities=28%  Similarity=0.271  Sum_probs=29.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ++..+|+|.| .|++|.++++.|+..|.  .++.+++.+
T Consensus        38 L~~~~VlvvG-~GGlGs~va~~La~aGv--g~i~ivD~D   73 (434)
T 1tt5_B           38 LDTCKVLVIG-AGGLGCELLKNLALSGF--RQIHVIDMD   73 (434)
T ss_dssp             HHTCCEEEEC-SSTHHHHHHHHHHHTTC--CCEEEEECC
T ss_pred             hcCCEEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEcCC
Confidence            3567899999 57899999999999875  678887654

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=94.68  E-value=0.54  Score=35.24  Aligned_cols=36  Identities=19%  Similarity=0.139  Sum_probs=31.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..+|+.
T Consensus       143 l~gktlGiIG-lG~IG~~vA~~l~~~G~---~V~~~d~~~  178 (404)
T 1sc6_A          143 ARGKKLGIIG-YGHIGTQLGILAESLGM---YVYFYDIEN  178 (404)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSC
T ss_pred             cCCCEEEEEe-ECHHHHHHHHHHHHCCC---EEEEEcCCc
Confidence            6789999998 89999999999999885   778888754

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=94.67  E-value=0.11  Score=38.46  Aligned_cols=36  Identities=22%  Similarity=0.331  Sum_probs=29.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++++|.| +|.+|+.+++++.+.|+   ++++++..+
T Consensus        10 ~~~~~IlIlG-~G~lg~~la~aa~~lG~---~viv~d~~~   45 (377)
T 3orq_A           10 KFGATIGIIG-GGQLGKMMAQSAQKMGY---KVVVLDPSE   45 (377)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESCT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEECCC
Confidence            4678999999 56789999999999987   667777644

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=94.64  E-value=0.061  Score=38.42  Aligned_cols=37  Identities=19%  Similarity=0.349  Sum_probs=31.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++++|.|+ |+.|++++..|.+.|.  .+|.++.|+.
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~--~~v~v~nRt~  156 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFA--KDIYVVTRNP  156 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence            46889999996 7899999999999875  5788888853

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=94.64  E-value=0.49  Score=34.03  Aligned_cols=38  Identities=11%  Similarity=0.086  Sum_probs=32.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..+|+..
T Consensus       139 ~l~g~~vgIiG-~G~IG~~~A~~l~~~G~---~V~~~d~~~~  176 (307)
T 1wwk_A          139 ELEGKTIGIIG-FGRIGYQVAKIANALGM---NILLYDPYPN  176 (307)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred             ccCCceEEEEc-cCHHHHHHHHHHHHCCC---EEEEECCCCC
Confidence            46789999998 79999999999998885   7788887654

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=94.63  E-value=0.43  Score=35.97  Aligned_cols=36  Identities=14%  Similarity=0.097  Sum_probs=31.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..++++
T Consensus       154 l~gktvGIIG-lG~IG~~vA~~l~~~G~---~V~~yd~~~  189 (416)
T 3k5p_A          154 VRGKTLGIVG-YGNIGSQVGNLAESLGM---TVRYYDTSD  189 (416)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECTTC
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHCCC---EEEEECCcc
Confidence            6789999999 89999999999998885   778888764

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.63  E-value=0.052  Score=38.47  Aligned_cols=34  Identities=24%  Similarity=0.304  Sum_probs=29.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +++|.|.|++|.+|..+++.|.+.|+   .|++.+|+
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~---~V~~~~r~   44 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAH---HLAAIEIA   44 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSS---EEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECC
Confidence            36899999889999999999999986   66777764

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=94.59  E-value=0.19  Score=36.64  Aligned_cols=36  Identities=14%  Similarity=0.121  Sum_probs=31.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..+|++
T Consensus       143 l~g~tvGIIG-~G~IG~~vA~~l~~~G~---~V~~~d~~~  178 (330)
T 4e5n_A          143 LDNATVGFLG-MGAIGLAMADRLQGWGA---TLQYHEAKA  178 (330)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHTTTSCC---EEEEECSSC
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHHCCC---EEEEECCCC
Confidence            6789999999 89999999999988875   778888865

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=94.59  E-value=0.11  Score=37.80  Aligned_cols=35  Identities=29%  Similarity=0.413  Sum_probs=28.3

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+.+++|+|+ |++|...+..+...|.  .+|++.+++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~  198 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGA--GPILVSDPN  198 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence            6889999999 9999999887777774  357777764

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=94.56  E-value=0.11  Score=38.22  Aligned_cols=36  Identities=17%  Similarity=0.168  Sum_probs=30.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..+|+
T Consensus       157 ~l~g~tvGIIG-lG~IG~~vA~~l~~~G~---~V~~~d~~  192 (352)
T 3gg9_A          157 VLKGQTLGIFG-YGKIGQLVAGYGRAFGM---NVLVWGRE  192 (352)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSH
T ss_pred             cCCCCEEEEEe-ECHHHHHHHHHHHhCCC---EEEEECCC
Confidence            46789999998 79999999999998885   77888765

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=94.55  E-value=0.036  Score=41.07  Aligned_cols=37  Identities=19%  Similarity=0.289  Sum_probs=27.8

Q ss_pred             CceEEEcCCcchhHHHHHHHHHh-hCCCCcEEEEeecC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLR-SCPDIGKVYILCRA   46 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~-~g~~~~~v~~~~r~   46 (152)
                      |++|.|.||+|++|+.++++++. +++.+..++.+..+
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~   38 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS   38 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence            36899999999999999995544 44445577777654

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=94.51  E-value=0.18  Score=36.94  Aligned_cols=36  Identities=25%  Similarity=0.252  Sum_probs=28.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .-.+.+++|+| +|++|...+..+...|.   +|++.+++
T Consensus       187 ~~~g~~VlV~G-~G~vG~~a~qla~~~Ga---~Vi~~~~~  222 (363)
T 3uog_A          187 LRAGDRVVVQG-TGGVALFGLQIAKATGA---EVIVTSSS  222 (363)
T ss_dssp             CCTTCEEEEES-SBHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCC---EEEEEecC
Confidence            34678999999 89999998887777774   67777764

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=94.49  E-value=0.094  Score=38.40  Aligned_cols=35  Identities=14%  Similarity=0.102  Sum_probs=28.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+.+++|+|+ |++|...+..+...|.   +|++.++++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga---~Vi~~~~~~  214 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGH---HVTVISSSN  214 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEeCCh
Confidence            6789999995 9999998887777774   678777653

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=94.47  E-value=0.54  Score=34.23  Aligned_cols=38  Identities=13%  Similarity=0.291  Sum_probs=32.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .+.++++.|.| .|.+|..+++.|...|.   +|++.+|+..
T Consensus       147 ~l~g~~vgIIG-~G~iG~~iA~~l~~~G~---~V~~~d~~~~  184 (334)
T 2dbq_A          147 DVYGKTIGIIG-LGRIGQAIAKRAKGFNM---RILYYSRTRK  184 (334)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred             CCCCCEEEEEc-cCHHHHHHHHHHHhCCC---EEEEECCCcc
Confidence            36788999998 79999999999999885   6788888654

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=94.44  E-value=0.3  Score=36.55  Aligned_cols=37  Identities=16%  Similarity=0.107  Sum_probs=31.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..+|+..
T Consensus       189 l~gktvGIIG-lG~IG~~vA~~l~a~G~---~V~~~d~~~~  225 (393)
T 2nac_A          189 LEAMHVGTVA-AGRIGLAVLRRLAPFDV---HLHYTDRHRL  225 (393)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHGGGTC---EEEEECSSCC
T ss_pred             CCCCEEEEEe-ECHHHHHHHHHHHhCCC---EEEEEcCCcc
Confidence            6789999998 89999999999998885   7788887653

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=94.43  E-value=0.44  Score=34.96  Aligned_cols=38  Identities=13%  Similarity=0.078  Sum_probs=31.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .+.++++.|.| .|.+|+.+++.+...|.   +|+..+|+..
T Consensus       165 ~l~g~tvGIIG-~G~IG~~vA~~l~~~G~---~V~~~d~~~~  202 (347)
T 1mx3_A          165 RIRGETLGIIG-LGRVGQAVALRAKAFGF---NVLFYDPYLS  202 (347)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECTTSC
T ss_pred             CCCCCEEEEEe-ECHHHHHHHHHHHHCCC---EEEEECCCcc
Confidence            36789999998 89999999999998885   6777887654

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=94.43  E-value=0.048  Score=40.13  Aligned_cols=34  Identities=26%  Similarity=0.338  Sum_probs=27.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      ++++.|.||+|++|+.+++.|.++ +.+ .+..+.+
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-ev~~i~~   41 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADH-PMF-ELTALAA   41 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC-SSE-EEEEEEE
T ss_pred             cceEEEECcCCHHHHHHHHHHhcC-CCC-EEEEEEc
Confidence            368999999999999999999876 333 6666654

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=94.34  E-value=0.071  Score=37.80  Aligned_cols=35  Identities=29%  Similarity=0.320  Sum_probs=30.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +++++|.|+ |+.|++++..|.+.|   ..|++..|+..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G---~~v~V~nRt~~  152 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQG---LQVSVLNRSSR  152 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence            789999995 899999999999997   37888888754

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=94.31  E-value=0.18  Score=36.90  Aligned_cols=36  Identities=14%  Similarity=0.177  Sum_probs=28.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+.+++|+|++|++|...+..+...|.   ++++.+++
T Consensus       166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga---~vi~~~~~  201 (357)
T 1zsy_A          166 QPGDSVIQNASNSGVGQAVIQIAAALGL---RTINVVRD  201 (357)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEECC
T ss_pred             CCCCEEEEeCCcCHHHHHHHHHHHHcCC---EEEEEecC
Confidence            4678999999999999998877776774   55665544

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=94.30  E-value=0.2  Score=36.70  Aligned_cols=35  Identities=26%  Similarity=0.302  Sum_probs=28.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~   46 (152)
                      -.+.+++|+|+ |++|...+..+... |.   +|++.+++
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga---~Vi~~~~~  220 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPA---TVIALDVK  220 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCC---EEEEEESS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCC---eEEEEeCC
Confidence            46789999999 89999988877777 74   67887764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	7e-09
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-07
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-07
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-06
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	7e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	7e-06
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	1e-05
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-05
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-05
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-05
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-05
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	6e-05
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	1e-04
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-04
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	2e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	7e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	7e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.001
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	0.001
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	0.002
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	0.002

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.1 bits (120), Expect = 7e-09
 Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 1/82 (1%)

Query: 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLR 69
          G  V+V GG G+ G      L +   ++  V  L R           +      + +R+ 
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLE-SLTPIASIHDRIS 59

Query: 70 KECPAQLSRLHIIEGDILQANL 91
          +        + +  GDI     
Sbjct: 60 RWKALTGKSIELYVGDICDFEF 81

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 47.3 bits (111), Expect = 1e-07
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 32/144 (22%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG+G++G     +LL++  D+  +  LC +KR           S LPV ERL  + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-----------SVLPVIERLGGK- 50

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA------SLKLEAELKENVA 126
                    +EGDI    L  +    ++    +  V + A       S++   E  +N  
Sbjct: 51  -----HPTFVEGDIRNEALMTE----ILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-- 99

Query: 127 ANTRGTQRLLDI--ALKMKKLVVS 148
            N  GT RL+    A  +K  + S
Sbjct: 100 -NVNGTLRLISAMRAANVKNFIFS 122

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 46.3 bits (109), Expect = 3e-07
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 24/134 (17%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           +L+TGG GF+G  ++  ++++  D   V  + +    LT    L   S +          
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQD--TVVNIDK----LTYAGNLESLSDI---------- 46

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELK---ENVAANT 129
            ++ +R +    DI  +    +    +  Q +   V + AA   ++  +      +  N 
Sbjct: 47  -SESNRYNFEHADICDSAEITR----IFEQYQPDAVMHLAAESHVDRSITGPAAFIETNI 101

Query: 130 RGTQRLLDIALKMK 143
            GT  LL++A K  
Sbjct: 102 VGTYALLEVARKYW 115

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 33/138 (23%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           +L+TGG GF+G  L +KL+    +   V ++     G   K  +  +     FE      
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHE---VTVVDNFFTG--RKRNVEHWIGHENFE------ 52

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAA---NT 129
                   +I  D+++            L  EV  +++ A+       +   +     NT
Sbjct: 53  --------LINHDVVEP-----------LYIEVDQIYHLASPASPPNYMYNPIKTLKTNT 93

Query: 130 RGTQRLLDIALKMKKLVV 147
            GT  +L +A ++   ++
Sbjct: 94  IGTLNMLGLAKRVGARLL 111

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 44.4 bits (104), Expect = 1e-06
 Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 14/129 (10%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
            L+TG TG  G  L E LL       +V+ +           R A        + + ++ 
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGY---EVHGI----------KRRASSFNTERVDHIYQDP 50

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGT 132
                + H+  GD+   +  +      +  +EV  +   +         +     +  GT
Sbjct: 51  HTCNPKFHLHYGDLSDTSN-LTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGT 109

Query: 133 QRLLDIALK 141
            RLL+    
Sbjct: 110 LRLLEAIRF 118

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 44.5 bits (103), Expect = 1e-06
 Identities = 19/83 (22%), Positives = 23/83 (27%), Gaps = 19/83 (22%)

Query: 8  YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFER 67
          + G+ V VTG TGF G  L   L         V                       +FE 
Sbjct: 6  WQGKRVFVTGHTGFKGGWLSLWLQTMGA---TVKGYSLTAPT-----------VPSLFET 51

Query: 68 LRKECPAQLSRLHIIEGDILQAN 90
           R         +    GDI   N
Sbjct: 52 ARVA-----DGMQSEIGDIRDQN 69

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 42.5 bits (98), Expect = 5e-06
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 18/79 (22%)

Query: 10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIG-KVYILCRAKRGLTPKARLAEFSKLPVFERL 68
          G  VLVTG  GF+   ++E+LL      G KV    R        ++LA   K    +  
Sbjct: 11 GSLVLVTGANGFVASHVVEQLLEH----GYKVRGTAR------SASKLANLQKRWDAKYP 60

Query: 69 RKECPAQLSRLHIIEGDIL 87
           +           +  D+L
Sbjct: 61 GR-------FETAVVEDML 72

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 7e-06
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK 47
          +SV + G +G  G+VLL+++L       KV ++ R K
Sbjct: 15 KSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRK 50

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 42.0 bits (97), Expect = 7e-06
 Identities = 28/127 (22%), Positives = 40/127 (31%), Gaps = 25/127 (19%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           +L+TGG GF+G  L    L    D+     L R          L   S L          
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA----TDNLHWLSSLG--------- 49

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELK---ENVAANT 129
                    + GDI   N    D   L+ +      F+ A  + +   +     +   N 
Sbjct: 50  -----NFEFVHGDIRNKN----DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINV 100

Query: 130 RGTQRLL 136
            GT  LL
Sbjct: 101 GGTLNLL 107

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.4 bits (95), Expect = 1e-05
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEF 59
          VLVTG +G  G+++ +KL            L R+ +G       A+ 
Sbjct: 6  VLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKIGGEADV 51

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 41.5 bits (96), Expect = 1e-05
 Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 28/130 (21%)

Query: 11  RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRK 70
           ++++VTGG GF+G   +  +  + PD+  V +L           +L         E +  
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVL----------DKLTYAGNKANLEAILG 51

Query: 71  ECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKEN----VA 126
           +      R+ ++ GDI        D++L+      +      A+         +    + 
Sbjct: 52  D------RVELVVGDIA-------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIH 98

Query: 127 ANTRGTQRLL 136
            N  GT  LL
Sbjct: 99  TNFIGTYTLL 108

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 41.5 bits (95), Expect = 1e-05
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 22/82 (26%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
          VL+ G  GF+G  L E+LLR   D  +VY L            ++ F   P         
Sbjct: 3  VLILGVNGFIGNHLTERLLRE--DHYEVYGLDIGSDA------ISRFLNHP--------- 45

Query: 73 PAQLSRLHIIEGDILQANLGIK 94
                 H +EGDI   +  I+
Sbjct: 46 -----HFHFVEGDISIHSEWIE 62

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.9 bits (94), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR 45
          + VL+ G TG  G+ LL+++L   P + KV    R
Sbjct: 3  KRVLLAGATGLTGEHLLDRILSE-PTLAKVIAPAR 36

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 40.5 bits (93), Expect = 3e-05
 Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 4/81 (4%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL--CRAKRGLTPKARLAEFSKLPVFERLRK 70
          VLV GG G++G   +  LLR       V I+       G +      E     + +    
Sbjct: 5  VLVCGGAGYIGSHFVRALLRDTNH--SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62

Query: 71 ECPAQLSRLHIIEGDILQANL 91
          + P       +  GD+   + 
Sbjct: 63 KPPWADRYAALEVGDVRNEDF 83

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (91), Expect = 5e-05
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 11/74 (14%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
          VLVTGG G++G   + +LL +      +     A RG              + E LR+  
Sbjct: 5  VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRG-----------GGSLPESLRRVQ 53

Query: 73 PAQLSRLHIIEGDI 86
                +   E DI
Sbjct: 54 ELTGRSVEFEEMDI 67

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 39.4 bits (91), Expect = 6e-05
 Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 21/140 (15%)

Query: 13  VLVTGGTGFMGKVLLEKLL-RSCPDIGKVYILCRAKRGLT-PKARLAEFSKLPVFERLRK 70
           +LVTGG GF+G   + +LL  + PD+    ++          +A LA     P       
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADP------- 55

Query: 71  ECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTR 130
                  RL  + GDI  A L  ++       + +      +   +  A        N +
Sbjct: 56  -------RLRFVHGDIRDAGLLAREL---RGVDAIVHFAAESHVDRSIAGASVFTETNVQ 105

Query: 131 GTQRLLDIALK--MKKLVVS 148
           GTQ LL  A+   + ++V  
Sbjct: 106 GTQTLLQCAVDAGVGRVVHV 125

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.6 bits (91), Expect = 6e-05
 Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 21/101 (20%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           VLVTGG G++G   + +L+ +  D     +                +  +   E L K  
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYD---CVVADNLSNS--------TYDSVARLEVLTKH- 51

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAA 113
                 +   E D+       K  + +  + ++  V + A 
Sbjct: 52  -----HIPFYEVDLCD----RKGLEKVFKEYKIDSVIHFAG 83

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 39.4 bits (90), Expect = 6e-05
 Identities = 8/50 (16%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKL 62
          +L+ G TG++G+ + +  L         ++L R     +   +       
Sbjct: 6  ILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQLLESF 52

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 38.9 bits (88), Expect = 1e-04
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFER 67
          ++VTGG GF+G  +++ L      I  + ++   K G T    L + +     ++
Sbjct: 2  IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDG-TKFVNLVDLNIADYMDK 53

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 38.6 bits (88), Expect = 1e-04
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP-KARLAEFSKLPVFE 66
          VL+ GGTG++GK ++   +         Y+L R +      K ++  + K    +
Sbjct: 6  VLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNIDKVQMLLYFKQLGAK 57

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.1 bits (87), Expect = 2e-04
 Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 21/134 (15%)

Query: 11  RSVLVTGGTGFMGKVLLEKLLRSCPDIG-KVYILCRAKRGLTPKARLAEFSKLPVFERLR 69
           RS LVTG TG  G  L + LL      G +V+ L   +     + RL E           
Sbjct: 1   RSALVTGITGQDGAYLAKLLLEK----GYRVHGLVARRSSD-TRWRLRELGIEG------ 49

Query: 70  KECPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANT 129
                    +   +GD+  A   ++ + +    +EV  +   +       +       + 
Sbjct: 50  --------DIQYEDGDMADACS-VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDG 100

Query: 130 RGTQRLLDIALKMK 143
            G   LL+   +  
Sbjct: 101 LGVTHLLEAIRQFS 114

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 38.4 bits (87), Expect = 2e-04
 Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 4/38 (10%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL 50
          +L+ G TG +G  L   L       G +  L    +  
Sbjct: 3  ILLFGKTGQVGWELQRSLAPV----GNLIALDVHSKEF 36

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.6 bits (86), Expect = 2e-04
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRK 70
          +  L+TG  GF+G  LLE LL+    +  +       +    + R     K     +  +
Sbjct: 17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ 76

Query: 71 ECPAQLSRLH 80
               L   +
Sbjct: 77 GDIRNLDDCN 86

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 3e-04
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 5/38 (13%)

Query: 9  AGRSVLVTGGTGFMGKVLLEKLLRSCPDIG-KVYILCR 45
          A + + + G TG  G   L + +++    G +V +L R
Sbjct: 2  AVKKIAIFGATGQTGLTTLAQAVQA----GYEVTVLVR 35

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 3e-04
 Identities = 27/134 (20%), Positives = 43/134 (32%), Gaps = 17/134 (12%)

Query: 13  VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
            L+TG TG  G  L E LL       +V+ + R         R+    K P         
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGY---EVHGIVRRSSSFNTG-RIEHLYKNPQAH------ 53

Query: 73  PAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASL--KLEAELKENVAANTR 130
                 + +  GD+  +   +K   ++   +   +   GA S         +     +  
Sbjct: 54  --IEGNMKLHYGDLTDSTCLVK---IINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGV 108

Query: 131 GTQRLLDIALKMKK 144
           GT RLLD       
Sbjct: 109 GTLRLLDAVKTCGL 122

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.6 bits (83), Expect = 7e-04
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 12/74 (16%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKEC 72
           L+TG TG  G  L E LL       +V+ L R         R + F+   +        
Sbjct: 4  ALITGITGQDGSYLTEFLLGKGY---EVHGLIR---------RSSNFNTQRINHIYIDPH 51

Query: 73 PAQLSRLHIIEGDI 86
              + + +   D+
Sbjct: 52 NVNKALMKLHYADL 65

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 36.3 bits (82), Expect = 7e-04
 Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 3/47 (6%)

Query: 13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEF 59
          +L+TG  G +G+ + ++L        +V         +T    + +F
Sbjct: 4  ILITGANGQLGREIQKQLKGKNV---EVIPTDVQDLDITNVLAVNKF 47

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 35.8 bits (81), Expect = 0.001
 Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 5/48 (10%)

Query: 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIG-KVYILCRAKRGLTPKARLA 57
          +++ V G TG  G  L+          G  V     + +GL  +   A
Sbjct: 4  KTIAVVGATGRQGASLIRVAAAV----GHHVRAQVHSLKGLIAEELQA 47

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.7 bits (81), Expect = 0.001
 Identities = 5/20 (25%), Positives = 10/20 (50%)

Query: 13 VLVTGGTGFMGKVLLEKLLR 32
          + +TG  GF+   +  +L  
Sbjct: 18 ISITGAGGFIASHIARRLKH 37

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 35.2 bits (80), Expect = 0.002
 Identities = 5/20 (25%), Positives = 10/20 (50%)

Query: 13 VLVTGGTGFMGKVLLEKLLR 32
          V + G  G +G  +  +L +
Sbjct: 5  VFIAGHRGMVGSAIRRQLEQ 24

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 34.7 bits (78), Expect = 0.002
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAE 58
           S+L+TG    +G  L++ LL        ++  CR +        LA+
Sbjct: 3  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK 50

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.82
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.78
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.76
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.75
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.75
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.74
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.74
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.74
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.74
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.74
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.74
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.74
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.73
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.73
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.73
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.73
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.73
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.73
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.72
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.72
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.72
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.72
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.72
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.72
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.72
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.72
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.72
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.72
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.72
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.71
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.71
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.71
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.71
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.71
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.71
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.69
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.69
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.69
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.69
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.68
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.68
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.67
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.67
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.67
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.67
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.67
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.66
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.66
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.66
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.66
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.66
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.65
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.65
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.65
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.64
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.64
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.64
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.64
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.64
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.64
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.63
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.63
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.63
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.62
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.62
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.61
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.61
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.61
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.58
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.58
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.58
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.56
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.55
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.54
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.53
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.51
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.47
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.46
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.45
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.43
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.42
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.4
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.38
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.37
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.35
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.23
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.21
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.21
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.14
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.12
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.12
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.06
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.05
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.03
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	98.98
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.38
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.23
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.21
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.07
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.87
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.87
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.87
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.87
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.83
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.76
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.75
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.74
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.7
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.69
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.67
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.65
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.65
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.64
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.62
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.62
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.61
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.49
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.47
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.46
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.45
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.42
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.41
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.36
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.34
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.33
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.23
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.17
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.08
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.06
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.04
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.03
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.02
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.97
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.93
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.78
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.76
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.69
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.69
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.61
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.59
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.55
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.54
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.54
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.51
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.51
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.44
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.44
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.43
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.32
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.31
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.3
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.23
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.21
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.16
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.13
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	96.1
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.06
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.94
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.93
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.85
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.77
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.76
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.71
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.69
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.68
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.55
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.39
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.36
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.36
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.3
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.27
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.27
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.21
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.14
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.07
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.04
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.97
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.83
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	94.54
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.53
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.51
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.51
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.3
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.26
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.18
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.16
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.14
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.04
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.01
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.92
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	93.62
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.6
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	93.51
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.43
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.38
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.38
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.29
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.22
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.2
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.15
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.02
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.96
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.95
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.92
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	92.85
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.72
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.72
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.68
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.67
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	92.65
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.62
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.61
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	92.31
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.24
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.14
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	92.14
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	91.86
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	91.81
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.8
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.71
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.64
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.62
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.6
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.53
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.39
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.35
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	91.15
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	91.0
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	90.99
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.77
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.21
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.13
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	90.07
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	89.98
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	89.55
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.48
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.42
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.38
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	89.11
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	88.66
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	88.52
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	88.27
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	88.22
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.15
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	87.75
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.73
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	87.63
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	87.62
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	87.61
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.32
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	87.01
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	86.5
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.2
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	86.06
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	85.82
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	85.71
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.65
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	85.52
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	85.41
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.05
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	85.0
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	84.71
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	84.71
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	84.47
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	84.18
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	84.05
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	82.93
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	82.7
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	82.5
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	82.19
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.03
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	81.14
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	80.83
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	80.74
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	80.34
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	80.29
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	80.14

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=7.7e-20  Score=132.78  Aligned_cols=117  Identities=21%  Similarity=0.219  Sum_probs=91.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |+||||||+||||+++++.|++.|+   .|++++|..... ..........               ..++.++.+|++|.
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~---~V~~~d~~~~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~d~   62 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGH---DVIILDNLCNSKRSVLPVIERLG---------------GKHPTFVEGDIRNE   62 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTTHHHHHHHHH---------------TSCCEEEECCTTCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCCCcchhhHHHHHhhc---------------CCCCEEEEeecCCH
Confidence            5799999999999999999999997   567777644332 2222221111               25789999999995


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      .+.+.++  ++|+|||+||..+.   ..++..++++|+.++.++++++++. ++++||++|
T Consensus        63 ~------~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~S  123 (338)
T d1udca_          63 A------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSS  123 (338)
T ss_dssp             H------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             H------HHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecC
Confidence            4      6888877  78999999997653   3456678999999999999999998 789999876

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5.9e-19  Score=122.06  Aligned_cols=116  Identities=17%  Similarity=0.135  Sum_probs=95.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |++++|+||||||++|++++++|++.| .+.+|++++|++.....                     .....+....+|+.
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g-~~~~v~~~~R~~~~~~~---------------------~~~~~i~~~~~D~~   69 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLTFDE---------------------EAYKNVNQEVVDFE   69 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCCCCS---------------------GGGGGCEEEECCGG
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CCCEEEEEecChhhhcc---------------------cccceeeeeeeccc
Confidence            677899999999999999999999997 34589999997653211                     01246677778887


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.+      ++...++++|++||++|......+.....++|+.++.+++++|.+. ++++||++|
T Consensus        70 ~~~------~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~S  127 (232)
T d2bkaa1          70 KLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLS  127 (232)
T ss_dssp             GGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             ccc------cccccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccCC
Confidence            744      6888889999999999987666777778999999999999999987 799999987

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=4.4e-18  Score=123.75  Aligned_cols=117  Identities=19%  Similarity=0.196  Sum_probs=88.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC-HHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT-PKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |.||||||+||||+++++.|++.|+   .|+++++...... ........               ...++.++.+|+.|.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~---~V~~~d~~~~~~~~~~~~~~~~---------------~~~~v~~~~~Dl~d~   63 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY---DCVVADNLSNSTYDSVARLEVL---------------TKHHIPFYEVDLCDR   63 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTHHHHHHHHH---------------HTSCCCEEECCTTCH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC---eEEEEECCCCcchhHHHhHHhh---------------cccCCeEEEeecCCH
Confidence            6799999999999999999999997   5677765433211 11111111               125788899999985


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +      ++..++.  ++|+|||+|+....   ......+..+|+.++.++++++.+. ++++||++|
T Consensus        64 ~------~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~S  124 (347)
T d1z45a2          64 K------GLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSS  124 (347)
T ss_dssp             H------HHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             H------HHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeec
Confidence            4      6777766  78999999997653   3444568899999999999999997 788999876

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3e-18  Score=116.37  Aligned_cols=110  Identities=17%  Similarity=0.175  Sum_probs=88.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |.+++|+||||+|++|++++++|+++|+   .|.+++|++...                     .......++++.+|++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~---~V~~~~R~~~~~---------------------~~~~~~~~~~~~gD~~   56 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDSSRL---------------------PSEGPRPAHVVVGDVL   56 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCGGGS---------------------CSSSCCCSEEEESCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEEcChhhc---------------------cccccccccccccccc
Confidence            6789999999999999999999999997   778888865421                     0112357889999999


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +.+      ++.+.++++|+|||++|.......    .+++..++.++++++++. +++|||++|
T Consensus        57 d~~------~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~s  110 (205)
T d1hdoa_          57 QAA------DVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACT  110 (205)
T ss_dssp             SHH------HHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEEC
T ss_pred             chh------hHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEEe
Confidence            854      789999999999999986543222    245678899999999987 789999986

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=6.1e-18  Score=117.83  Aligned_cols=123  Identities=15%  Similarity=0.147  Sum_probs=92.8

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +.++||+++||||+++||++++++|+++|+   +|++.+|+..  .+.+..+++..             ...++..+.+|
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~---~V~l~~r~~~--~l~~~~~~~~~-------------~~~~~~~~~~D   64 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKS---KLVLWDINKH--GLEETAAKCKG-------------LGAKVHTFVVD   64 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEee
Confidence            458899999999999999999999999996   7888888643  22222222211             24688999999


Q ss_pred             cCCCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++|++      ++.++       +.++|++|||||....       .+.+++++++|+.++.++.+++.+.   ++..++
T Consensus        65 vs~~~------~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~I  138 (244)
T d1yb1a_          65 CSNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHI  138 (244)
T ss_dssp             TTCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             CCCHH------HHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceE
Confidence            99965      34433       3478999999997642       5667889999999999999987642   345688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       139 v~is  142 (244)
T d1yb1a_         139 VTVA  142 (244)
T ss_dssp             EEEC
T ss_pred             EEee
Confidence            8875

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.75  E-value=3e-18  Score=124.52  Aligned_cols=122  Identities=21%  Similarity=0.157  Sum_probs=94.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +|++||||||+||||+++++.|+++|+   .|++++|+...   .+.+.....          ..........+.+|+.+
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~---~V~~~vR~~~~---~~~~~~~~~----------~~~~~~~~~~~~~Dl~~   73 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGY---KVRGTARSASK---LANLQKRWD----------AKYPGRFETAVVEDMLK   73 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHHHH----------HHSTTTEEEEECSCTTS
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEeCCchh---HHHHHHhhh----------ccccccccEEEeccccc
Confidence            589999999999999999999999997   67788885321   122211110          01112344567889988


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ..      .+..++.++|+++|+++......+....++.|+.++.+++++|.+..++++||++|
T Consensus        74 ~~------~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~S  131 (342)
T d1y1pa1          74 QG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS  131 (342)
T ss_dssp             TT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEEC
T ss_pred             hh------hhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccc
Confidence            76      47778889999999999887777788889999999999999999976789999986

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=3.6e-18  Score=124.83  Aligned_cols=124  Identities=22%  Similarity=0.224  Sum_probs=86.8

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .|++|||||+||||++++++|++.|+   .|++++|..+..+ .+++..+..         .......++.++.+|++|.
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~---~V~~~~r~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~Dl~d~   67 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGY---EVHGIKRRASSFN-TERVDHIYQ---------DPHTCNPKFHLHYGDLSDT   67 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECC-------------------------------CCEEECCCCSSCH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcC---EEEEEECCCcccc-hhhHHHHHh---------hhhhcCCCeEEEEeecCCH
Confidence            37899999999999999999999997   7788888643211 111111111         1111236899999999985


Q ss_pred             CCCCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcC--CCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMK--KLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~S  152 (152)
                      +      ++.+.+++  +|+|||+|+..+.   ..++...+++|+.++.+++++|...+  +..+||++|
T Consensus        68 ~------~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~S  131 (357)
T d1db3a_          68 S------NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAS  131 (357)
T ss_dssp             H------HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred             H------HHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEE
Confidence            4      68888874  5999999998653   35566789999999999999998862  334699876

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.74  E-value=1.4e-17  Score=119.86  Aligned_cols=114  Identities=23%  Similarity=0.307  Sum_probs=85.4

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +||||||+||||++++++|+++|+   .|+++++-... ...+++..+..              ..+++++.+|+++.+ 
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~---~V~~id~~~~~-~~~~~~~~~~~--------------~~~~~~i~~Di~~~~-   62 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI---DLIVFDNLSRK-GATDNLHWLSS--------------LGNFEFVHGDIRNKN-   62 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCST-THHHHHHHHHT--------------TCCCEEEECCTTCHH-
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC---EEEEEECCCcc-cchhHHHHhhc--------------cCCcEEEEcccCCHH-
Confidence            799999999999999999999997   56676643221 22333333222              267899999999854 


Q ss_pred             CCChhHHHHHhcc--ccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEe
Q psy11862         92 GIKDSDLLMLQEE--VSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLD  150 (152)
Q Consensus        92 ~~~~~~~~~~~~~--~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  150 (152)
                           .+.+++++  +|+|||+|+....   ..+....+++|+.++.++++++.+. +++++++
T Consensus        63 -----~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~  120 (338)
T d1orra_          63 -----DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNII  120 (338)
T ss_dssp             -----HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred             -----HHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-ccccccc
Confidence                 67887764  5999999998764   3355678999999999999999997 4554443

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.74  E-value=1.1e-17  Score=117.05  Aligned_cols=122  Identities=19%  Similarity=0.210  Sum_probs=91.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++.+|+..  .+.+..+++..            ..+.++.++.+|++
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga---~V~i~~r~~~--~~~~~~~~l~~------------~~g~~~~~~~~Dv~   65 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGC---SVVVASRNLE--EASEAAQKLTE------------KYGVETMAFRCDVS   65 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH------------HHCCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHH------------HhCCcEEEEEccCC
Confidence            7899999999999999999999999996   7788887533  22222222211            11367889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++++++       .++|++|||||...       ..++|+..+++|+.+++.+.+++.+.   ++..++|+
T Consensus        66 ~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~  139 (251)
T d1vl8a_          66 NYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIIN  139 (251)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccc
Confidence            864      444443       47899999999754       26788889999999999999998652   23457777


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       140 i~  141 (251)
T d1vl8a_         140 IG  141 (251)
T ss_dssp             EC
T ss_pred             cc
Confidence            64

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.74  E-value=1.8e-17  Score=115.01  Aligned_cols=112  Identities=25%  Similarity=0.272  Sum_probs=88.8

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      ..+++|+++||||+++||+++++.|++.|+   +|++.+|+...                          ...+..+.+|
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga---~V~~~~r~~~~--------------------------~~~~~~~~~D   53 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGH---KVAVTHRGSGA--------------------------PKGLFGVEVD   53 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSSCC--------------------------CTTSEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCcch--------------------------hcCceEEEEe
Confidence            458899999999999999999999999996   78888886542                          2456778999


Q ss_pred             cCCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         86 ILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++++      ++++++       .++|++|||||...       ..++|+..+++|+.+++.+.+++.+.   ++..++
T Consensus        54 v~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~I  127 (237)
T d1uzma1          54 VTDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRM  127 (237)
T ss_dssp             TTCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             cCCHH------HHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCce
Confidence            99965      444433       47899999999754       26788999999999999998876542   245688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       128 v~is  131 (237)
T d1uzma1         128 IFIG  131 (237)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            8875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.74  E-value=2.1e-17  Score=116.19  Aligned_cols=124  Identities=19%  Similarity=0.242  Sum_probs=90.7

Q ss_pred             ccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHH-HHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          5 ARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKAR-LAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         5 ~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      +.-+++|+++||||+++||++++++|++.|+   +|++.+|+..  +..+. .+++..             ...++..+.
T Consensus         2 ~~dL~gK~alITGas~GIG~aia~~la~~G~---~Vv~~~r~~~--~~~~~~~~~~~~-------------~g~~~~~~~   63 (261)
T d1geea_           2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKA---KVVVNYRSKE--DEANSVLEEIKK-------------VGGEAIAVK   63 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHHHH-------------TTCEEEEEE
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcH--HHHHHHHHHHHh-------------cCCcEEEEE
Confidence            3348999999999999999999999999996   7788888642  11222 222211             136788999


Q ss_pred             cccCCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CC-C
Q psy11862         84 GDILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KK-L  145 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~  145 (152)
                      +|+++++      ++++++       .++|++|||||....       .++|+..+++|+.+++++.+++.+.   ++ .
T Consensus        64 ~Dvt~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g  137 (261)
T d1geea_          64 GDVTVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIK  137 (261)
T ss_dssp             CCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC
T ss_pred             ccCCCHH------HHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccc
Confidence            9999865      444443       478999999997642       6788899999999999998887542   22 3


Q ss_pred             cceEecC
Q psy11862        146 VVSLDIG  152 (152)
Q Consensus       146 ~~~v~~S  152 (152)
                      .+++++|
T Consensus       138 ~~Iv~is  144 (261)
T d1geea_         138 GTVINMS  144 (261)
T ss_dssp             CEEEEEC
T ss_pred             ccccccc
Confidence            3577664

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.74  E-value=3.1e-17  Score=114.43  Aligned_cols=120  Identities=13%  Similarity=0.154  Sum_probs=90.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+++||+++++.|++.|+   +|++.+|++.. ...+.++.                ...++..+.+|+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga---~V~~~~~~~~~-~~~~~~~~----------------~g~~~~~~~~Dv   61 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGA---DIAIADLVPAP-EAEAAIRN----------------LGRRVLTVKCDV   61 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCH-HHHHHHHH----------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCchH-HHHHHHHH----------------cCCcEEEEEeeC
Confidence            47899999999999999999999999996   67888886531 11111111                136788999999


Q ss_pred             CCCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      +++++       +.++|++|||||....       .++|+..+++|+.+++.+.+++.+.   ++..++|
T Consensus        62 s~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv  135 (247)
T d2ew8a1          62 SQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRII  135 (247)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCcc
Confidence            9865      44444       3478999999997542       5788999999999999999988642   2446788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       136 ~is  138 (247)
T d2ew8a1         136 NLT  138 (247)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            775

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=2.3e-17  Score=121.63  Aligned_cols=122  Identities=19%  Similarity=0.177  Sum_probs=85.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee---cC-----------CCCCCHHHHHHHHhcChhhhhhhhhcccc
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC---RA-----------KRGLTPKARLAEFSKLPVFERLRKECPAQ   75 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~---r~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (152)
                      ||+||||||+||||++++++|++.||   .|++++   |+           .......+.+.....            ..
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~---~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~   65 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY---EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA------------LT   65 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHH------------HH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEecCCcccccccccccccccccchHHHHHHHHh------------hc
Confidence            68999999999999999999999998   456554   11           111122222222211            11


Q ss_pred             CCcEEEEEcccCCCCCCCChhHHHHHhc--cccEEEeccccccc------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcc
Q psy11862         76 LSRLHIIEGDILQANLGIKDSDLLMLQE--EVSVVFNGAASLKL------EAELKENVAANTRGTQRLLDIALKMKKLVV  147 (152)
Q Consensus        76 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  147 (152)
                      ..++.++.+|++|.+      .+..+++  ++|+|||+||....      .......++.|+.++.++++++.+.+..++
T Consensus        66 ~~~i~~~~~Dl~d~~------~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~  139 (393)
T d1i24a_          66 GKSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECH  139 (393)
T ss_dssp             CCCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             CCCcEEEEccCCCHH------HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccc
Confidence            367899999999954      6888877  56999999987543      233456789999999999999998743445


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +++.|
T Consensus       140 ~i~~s  144 (393)
T d1i24a_         140 LVKLG  144 (393)
T ss_dssp             EEEEC
T ss_pred             eeecc
Confidence            66554

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=1.8e-17  Score=116.11  Aligned_cols=121  Identities=17%  Similarity=0.143  Sum_probs=89.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||++++++|++.|+   +|++.+|+..  .+.+..+++..             .+.++.++.+|++
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~~--~~~~~~~~l~~-------------~g~~~~~~~~Dvs   70 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINAD--AANHVVDEIQQ-------------LGGQAFACRCDIT   70 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHH-------------cCCcEEEEEccCC
Confidence            6899999999999999999999999996   7788887532  22222223222             1367889999999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEecccccc------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEec
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~  151 (152)
                      +++      +++++       +.++|++|||||...      ..++|+..+++|+.+++.+.+.+.+.   ++..++|++
T Consensus        71 ~~~------~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~i  144 (255)
T d1fmca_          71 SEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI  144 (255)
T ss_dssp             CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccc
Confidence            965      34333       347899999999754      26778889999999999999887542   234567765


Q ss_pred             C
Q psy11862        152 G  152 (152)
Q Consensus       152 S  152 (152)
                      |
T Consensus       145 s  145 (255)
T d1fmca_         145 T  145 (255)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.73  E-value=1.2e-17  Score=116.41  Aligned_cols=119  Identities=17%  Similarity=0.140  Sum_probs=89.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+++||+++++.|++.|+   +|++.+|++.      +++++...            ...+..++.+|+
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~---~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv   61 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGA---KVVFGDILDE------EGKAMAAE------------LADAARYVHLDV   61 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHHH------------TGGGEEEEECCT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHHH------------hhCcceEEEeec
Confidence            47899999999999999999999999996   7788888532      22222110            124678899999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++++++       .++|++|||||....       .++|++.+++|+.+++.+.+.+.+.   ++..++|
T Consensus        62 ~~~~------~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii  135 (244)
T d1nffa_          62 TQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSII  135 (244)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEE
Confidence            9965      444443       478999999997642       6788999999999999999877532   2346788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       136 ~is  138 (244)
T d1nffa_         136 NIS  138 (244)
T ss_dssp             EEC
T ss_pred             ecc
Confidence            775

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.9e-17  Score=115.20  Aligned_cols=128  Identities=20%  Similarity=0.185  Sum_probs=92.4

Q ss_pred             cccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862          2 GDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHI   81 (152)
Q Consensus         2 ~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (152)
                      +.|.+ +++|+++||||+++||.++++.|+++|+   +|++.+|+..  .+.+..+++...           ....++.+
T Consensus         3 ~~M~~-lk~Kv~lITGas~GIG~aiA~~la~~G~---~Vv~~~r~~~--~l~~~~~~l~~~-----------~~~~~~~~   65 (257)
T d1xg5a_           3 PGMER-WRDRLALVTGASGGIGAAVARALVQQGL---KVVGCARTVG--NIEELAAECKSA-----------GYPGTLIP   65 (257)
T ss_dssp             TTCGG-GTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHHT-----------TCSSEEEE
T ss_pred             CCCCC-CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHhc-----------CCCceEEE
Confidence            34444 8899999999999999999999999996   6788887532  222222222221           11257889


Q ss_pred             EEcccCCCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cC
Q psy11862         82 IEGDILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MK  143 (152)
Q Consensus        82 ~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~  143 (152)
                      +.+|+++++      ++.++       +.++|++|||||...       ..+.|+..+++|+.+++++.+++.+    ..
T Consensus        66 ~~~Dls~~~------~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~  139 (257)
T d1xg5a_          66 YRCDLSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN  139 (257)
T ss_dssp             EECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             EEccCCCHH------HHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhc
Confidence            999999965      44443       347899999999754       2678888999999999998888753    21


Q ss_pred             -CCcceEecC
Q psy11862        144 -KLVVSLDIG  152 (152)
Q Consensus       144 -~~~~~v~~S  152 (152)
                       ...++|++|
T Consensus       140 ~~~g~Ii~is  149 (257)
T d1xg5a_         140 VDDGHIININ  149 (257)
T ss_dssp             CCSCEEEEEC
T ss_pred             cCCCceEEEe
Confidence             235788775

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.73  E-value=2.3e-17  Score=115.81  Aligned_cols=121  Identities=17%  Similarity=0.189  Sum_probs=90.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ++||+++||||+++||+++++.|+++|+   +|++.+|++.  .+.+...++..             ...++.++.+|++
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~~--~l~~~~~~~~~-------------~g~~~~~~~~Dv~   67 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGA---SVYTCSRNQK--ELNDCLTQWRS-------------KGFKVEASVCDLS   67 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCEEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCCceEEEeeCC
Confidence            7899999999999999999999999996   7788888533  23333333322             1367888999999


Q ss_pred             CCCCCCChhHHHHH-------hc-cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLML-------QE-EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~-~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      +++++       +. ++|++|||||....       .++|+.++++|+.+++.+.+++.+.   ++..++|
T Consensus        68 ~~~------~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii  141 (259)
T d2ae2a_          68 SRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVV  141 (259)
T ss_dssp             CHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccc
Confidence            865      33333       23 58999999997542       5778889999999999999887642   2456888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       142 ~is  144 (259)
T d2ae2a_         142 FIS  144 (259)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            875

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.73  E-value=2.1e-17  Score=116.06  Aligned_cols=122  Identities=14%  Similarity=0.179  Sum_probs=90.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+++||+++++.|+++|+   +|++.+|++.  .+.+..+++..             ...++..+.+|+
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~~--~l~~~~~~~~~-------------~g~~~~~~~~Dv   63 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGT---AIALLDMNRE--ALEKAEASVRE-------------KGVEARSYVCDV   63 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHT-------------TTSCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEccC
Confidence            37899999999999999999999999996   7788888532  22222222211             236788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      ++++      ++++++       .++|++|||||...        ..+.|+..+++|+.+++.+.+++.+.   ++..++
T Consensus        64 ~~~~------~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~I  137 (260)
T d1zema1          64 TSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRI  137 (260)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCC
Confidence            9864      344433       47899999999653        15678889999999999999987542   245688


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       138 I~is  141 (260)
T d1zema1         138 VNTA  141 (260)
T ss_dssp             EEEC
T ss_pred             Ceee
Confidence            8875

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.73  E-value=1.3e-17  Score=116.77  Aligned_cols=118  Identities=14%  Similarity=0.107  Sum_probs=90.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||++++++|+++|+   +|++.+|+.      +++.+..+            ....++.++.+|++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~~~~~~~------------~~~~~~~~~~~Dv~   61 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGA---RVVLADVLD------EEGAATAR------------ELGDAARYQHLDVT   61 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHH------------TTGGGEEEEECCTT
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH------------HhCCceEEEEcccC
Confidence            6899999999999999999999999996   778888753      22322211            11257889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++++++       .++|++|||||....       .++|+..+++|+.+++.+.+++.+.   ++..++|+
T Consensus        62 ~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~  135 (254)
T d1hdca_          62 IEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVN  135 (254)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecc
Confidence            865      444443       478999999997642       5788889999999999999988642   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       136 is  137 (254)
T d1hdca_         136 IS  137 (254)
T ss_dssp             EC
T ss_pred             cc
Confidence            75

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1.9e-17  Score=115.30  Aligned_cols=118  Identities=19%  Similarity=0.245  Sum_probs=89.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++.+|++.      .++++...     +       ..+...+.+|++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~---~Vv~~~r~~~------~l~~~~~~-----~-------~~~~~~~~~Dv~   60 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGA---KVIGTATSEN------GAQAISDY-----L-------GANGKGLMLNVT   60 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSHH------HHHHHHHH-----H-------GGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCHH------HHHHHHHH-----h-------CCCCcEEEEEec
Confidence            6899999999999999999999999996   6788887532      22222110     0       246778899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++++++       .++|++|||||....       .++|+..+++|+.+++.+.+++.+.   ++..++|+
T Consensus        61 ~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~  134 (243)
T d1q7ba_          61 DPA------SIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIIT  134 (243)
T ss_dssp             CHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeee
Confidence            854      444443       478999999987542       6788889999999999999988642   24468888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       135 is  136 (243)
T d1q7ba_         135 IG  136 (243)
T ss_dssp             EC
T ss_pred             ec
Confidence            76

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.72  E-value=1.8e-17  Score=116.42  Aligned_cols=122  Identities=13%  Similarity=0.116  Sum_probs=90.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHH-HHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLA-EFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++.+|+..  +..+.+. ++..            ....++.++.+|+
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga---~V~~~~r~~~--~~~~~~~~~~~~------------~~g~~~~~~~~Dv   64 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGA---DIVLNGFGDA--AEIEKVRAGLAA------------QHGVKVLYDGADL   64 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEECCSCH--HHHHHHHHHHHH------------HHTSCEEEECCCT
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCcH--HHHHHHHHHHHH------------hcCCcEEEEECCC
Confidence            6899999999999999999999999996   7788887532  1122221 1111            1136788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++++++       .++|++|||||...       ..++|+..+++|+.+++.+.+++.+.   ++..++|
T Consensus        65 ~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv  138 (260)
T d1x1ta1          65 SKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRII  138 (260)
T ss_dssp             TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEe
Confidence            9965      454444       47899999999764       26788899999999999998887542   2446788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       139 ~is  141 (260)
T d1x1ta1         139 NIA  141 (260)
T ss_dssp             EEC
T ss_pred             ecc
Confidence            775

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.72  E-value=1.7e-17  Score=115.96  Aligned_cols=121  Identities=16%  Similarity=0.190  Sum_probs=91.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|++.|+   +|++.+|++.  .+.+..+++..             ...++..+.+|++
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga---~V~~~~r~~~--~l~~~~~~l~~-------------~g~~~~~~~~Dvt   69 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVS---HVICISRTQK--SCDSVVDEIKS-------------FGYESSGYAGDVS   69 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSS---EEEEEESSHH--HHHHHHHHHHT-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEccCC
Confidence            7899999999999999999999999996   7788888532  22222222221             1357889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++.+++       .++|++|||||....       .++|+.++++|+.+++.+.+++.+.   ++..++|+
T Consensus        70 ~~~------~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVn  143 (251)
T d2c07a1          70 KKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIIN  143 (251)
T ss_dssp             CHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEE
Confidence            965      444443       478999999997542       5788999999999999999887542   24568888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       144 is  145 (251)
T d2c07a1         144 IS  145 (251)
T ss_dssp             EC
T ss_pred             EC
Confidence            75

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.72  E-value=2.5e-17  Score=115.47  Aligned_cols=118  Identities=16%  Similarity=0.172  Sum_probs=89.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++.+|+.      +.+++...            ....++..+.+|++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~l~~~~~------------~~~~~~~~~~~Dvt   61 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGA---RVAIADINL------EAARATAA------------EIGPAACAIALDVT   61 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTE---EEEEEESCH------HHHHHHHH------------HHCTTEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHH------------HhCCceEEEEeeCC
Confidence            6899999999999999999999999995   778888753      22222211            11367889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceE
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALK----MKKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v  149 (152)
                      +++      ++.+++       .++|++|||||....       .++|+..+++|+.+++.+.+++.+    .+...++|
T Consensus        62 ~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv  135 (256)
T d1k2wa_          62 DQA------SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKII  135 (256)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccc
Confidence            965      444443       478999999997542       678888999999999999987543    22346888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       136 ~is  138 (256)
T d1k2wa_         136 NMA  138 (256)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            875

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=2.7e-17  Score=120.08  Aligned_cols=113  Identities=17%  Similarity=0.090  Sum_probs=89.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++|+||||||+||||++|+++|+++|+   .|+.+++.......                     .......+..+|+.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~---~V~~~d~~~~~~~~---------------------~~~~~~~~~~~D~~~   69 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH---YVIASDWKKNEHMT---------------------EDMFCDEFHLVDLRV   69 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCSSSC---------------------GGGTCSEEEECCTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEeCCCccchh---------------------hhcccCcEEEeechh
Confidence            467899999999999999999999997   66777765442110                     011345677889887


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .+      ++...++++|.|||+|+....    ..........|+.++.++++++.+. ++++||++|
T Consensus        70 ~~------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~S  130 (363)
T d2c5aa1          70 ME------NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYAS  130 (363)
T ss_dssp             HH------HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred             HH------HHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Ccccccccc
Confidence            43      678888899999999987654    4566778899999999999999998 789999876

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.72  E-value=1.7e-17  Score=115.80  Aligned_cols=116  Identities=19%  Similarity=0.196  Sum_probs=87.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .++||+++||||+++||+++++.|+++|+   +|++.+|++.   ..+..+.                  ....++.+|+
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~---~V~~~~~~~~---~~~~~~~------------------~~~~~~~~Dv   57 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGA---LVALCDLRPE---GKEVAEA------------------IGGAFFQVDL   57 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTT---HHHHHHH------------------HTCEEEECCT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH---HHHHHHH------------------cCCeEEEEeC
Confidence            36899999999999999999999999996   7788888643   2222211                  1245678999


Q ss_pred             CCCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      +++++       +.++|++|||||....       .++|+..+++|+.+++++.+++.+.   ++..++|
T Consensus        58 ~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii  131 (248)
T d2d1ya1          58 EDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIV  131 (248)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccc
Confidence            9854      34333       3478999999997542       5778899999999999999998652   2446888


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       132 ~is  134 (248)
T d2d1ya1         132 NVA  134 (248)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            765

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.72  E-value=2.6e-17  Score=115.42  Aligned_cols=120  Identities=20%  Similarity=0.207  Sum_probs=89.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++|+++||||+++||+++++.|+++|+   +|++.+|++.  .+.+..+++..             ...++.++.+|+++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga---~V~i~~r~~~--~l~~~~~~l~~-------------~g~~~~~~~~Dvs~   62 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGL---RVFVCARGEE--GLRTTLKELRE-------------AGVEADGRTCDVRS   62 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEeecCC
Confidence            478999999999999999999999996   6788888532  22222233222             13678899999999


Q ss_pred             CCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-----CCCcceE
Q psy11862         89 ANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-----KKLVVSL  149 (152)
Q Consensus        89 ~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v  149 (152)
                      ++      ++++++       .++|++|||||....       .++|++.+++|+.+++.+.+++.+.     .+..++|
T Consensus        63 ~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii  136 (257)
T d2rhca1          63 VP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIV  136 (257)
T ss_dssp             HH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEE
T ss_pred             HH------HHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccc
Confidence            65      444443       478999999997542       6788899999999999999998652     1335677


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       137 ~i~  139 (257)
T d2rhca1         137 NIA  139 (257)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.72  E-value=3.1e-17  Score=115.09  Aligned_cols=123  Identities=20%  Similarity=0.222  Sum_probs=90.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++.+|+..  .+.+...++..           .....++..+.+|++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~~--~l~~~~~~~~~-----------~~~~~~~~~~~~Dvt   65 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGA---KLSLVDVSSE--GLEASKAAVLE-----------TAPDAEVLTTVADVS   65 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-----------HCTTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-----------hCCCCeEEEEeccCC
Confidence            6899999999999999999999999996   7788888532  12222222111           011357889999999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      ++.++       +.++|++|||||...        ..++|+..+++|+.+++.+.+++.+.   ++..++|
T Consensus        66 ~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii  139 (258)
T d1iy8a_          66 DEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVV  139 (258)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCc
Confidence            965      44444       347899999999643        15778889999999999999987542   2446788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       140 ~is  142 (258)
T d1iy8a_         140 NTA  142 (258)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            775

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.72  E-value=8.3e-18  Score=123.10  Aligned_cols=119  Identities=21%  Similarity=0.309  Sum_probs=87.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+||||||+|+||++++++|++.|++  .|+++++...... .+.+..+              ....++.++.+|++++.
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~--vv~~~d~~~~~~~-~~~~~~~--------------~~~~~~~~~~~Dl~d~~   63 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQD--TVVNIDKLTYAGN-LESLSDI--------------SESNRYNFEHADICDSA   63 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC--EEEEEECCCTTCC-GGGGTTT--------------TTCTTEEEEECCTTCHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCC--EEEEEeCCCcccc-HHHHHhh--------------hhcCCcEEEEccCCCHH
Confidence            58999999999999999999999884  4556665432221 1112111              11368999999999954


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcC--------CCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMK--------KLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~v~~S  152 (152)
                            .+..+++  .+|+|||+|+..+.   ..++..++++|+.++.+++++|.+..        +.++||++|
T Consensus        64 ------~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~S  132 (361)
T d1kewa_          64 ------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIS  132 (361)
T ss_dssp             ------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEE
T ss_pred             ------HHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEec
Confidence                  5777766  58999999997664   23456689999999999999997641        235788875

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.72  E-value=4.3e-17  Score=113.95  Aligned_cols=121  Identities=20%  Similarity=0.233  Sum_probs=89.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+++||+++++.|++.|+   +|++.+|+..  .+.+..+++.              ...++.++.+|+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~--~~~~~~~~~~--------------~~~~~~~~~~Dv   63 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGA---KVMITGRHSD--VGEKAAKSVG--------------TPDQIQFFQHDS   63 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHC--------------CTTTEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHhC--------------CCCcEEEEEccC
Confidence            47899999999999999999999999996   7788887532  1122212211              135788999999


Q ss_pred             CCCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCC-cce
Q psy11862         87 LQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKL-VVS  148 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~  148 (152)
                      ++++      ++.++       +.++|++|||||...       ..++|+..+++|+.+++.+.+++.+.   ++. .++
T Consensus        64 ~~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~I  137 (251)
T d1zk4a1          64 SDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASI  137 (251)
T ss_dssp             TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCce
Confidence            9965      34433       347899999999754       26778889999999999999988642   222 467


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      |++|
T Consensus       138 i~is  141 (251)
T d1zk4a1         138 INMS  141 (251)
T ss_dssp             EEEC
T ss_pred             Eeee
Confidence            7765

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.6e-17  Score=113.92  Aligned_cols=118  Identities=19%  Similarity=0.219  Sum_probs=89.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .++||+++||||+++||+++++.|+++|+   +|++.+|++      +.++++...             ...+..+.+|+
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~---~V~~~~r~~------~~l~~~~~~-------------~~~~~~~~~Dv   61 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGA---RVVAVSRTQ------ADLDSLVRE-------------CPGIEPVCVDL   61 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHHH-------------STTCEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCH------HHHHHHHHh-------------cCCCeEEEEeC
Confidence            47899999999999999999999999996   778888753      233332211             24577889999


Q ss_pred             CCCCCCCChhHHHHHhc---cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQE---EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM----KKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~S  152 (152)
                      +|++      +++++++   ++|++|||||....       .++|+..+++|+.+++.+.+++.+.    ++..++|++|
T Consensus        62 ~d~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~is  135 (244)
T d1pr9a_          62 GDWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS  135 (244)
T ss_dssp             TCHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCHH------HHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecc
Confidence            9864      5655554   78999999997542       6788889999999999998887541    2346777765

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=4e-17  Score=114.58  Aligned_cols=121  Identities=15%  Similarity=0.175  Sum_probs=89.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|++.|+   +|++.+|++.  .+.+...++..             ...++..+.+|++
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga---~V~~~~r~~~--~l~~~~~~~~~-------------~~~~~~~~~~Dv~   67 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGA---VIHTCARNEY--ELNECLSKWQK-------------KGFQVTGSVCDAS   67 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCceEEEeccCC
Confidence            6899999999999999999999999996   7788888532  22332233221             1357899999999


Q ss_pred             CCCCCCChhHHHHH-------h-ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLML-------Q-EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~-~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      ++.++       + ..+|++|||||...       ..++|+..+++|+.+++.+.+++.+.   ++..++|
T Consensus        68 ~~~------~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv  141 (259)
T d1xq1a_          68 LRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNII  141 (259)
T ss_dssp             SHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccc
Confidence            864      33332       3 35899999999754       26788999999999999999987642   2446788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       142 ~is  144 (259)
T d1xq1a_         142 FMS  144 (259)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            775

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.71  E-value=6.9e-17  Score=113.89  Aligned_cols=121  Identities=17%  Similarity=0.219  Sum_probs=89.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+++||+++++.|+++|+   +|++.+|+..  .+.+...++..              ...+.++.+|+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga---~V~i~~r~~~--~~~~~~~~l~~--------------~~~~~~~~~Dv   63 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGA---KVVIADIADD--HGQKVCNNIGS--------------PDVISFVHCDV   63 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHCC--------------TTTEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHhcC--------------CCceEEEEccC
Confidence            47899999999999999999999999996   7788887532  22222222211              24677889999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc---------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcc
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL---------EAELKENVAANTRGTQRLLDIALKM---KKLVV  147 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~  147 (152)
                      ++++      ++++++       .++|++|||||....         .+.|+.++++|+.+++.+.+++.+.   ++..+
T Consensus        64 ~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~  137 (268)
T d2bgka1          64 TKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGS  137 (268)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCC
Confidence            9865      454443       478999999996431         4678889999999999999988642   23456


Q ss_pred             eEecC
Q psy11862        148 SLDIG  152 (152)
Q Consensus       148 ~v~~S  152 (152)
                      +|++|
T Consensus       138 ii~is  142 (268)
T d2bgka1         138 IVFTA  142 (268)
T ss_dssp             EEEEC
T ss_pred             ccccc
Confidence            77654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.71  E-value=1.4e-16  Score=110.70  Aligned_cols=116  Identities=15%  Similarity=0.084  Sum_probs=86.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|++.|+   +|++.+|+.      +.+++....              -+..++.+|++
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~---~V~~~~r~~------~~l~~~~~~--------------~~~~~~~~Dv~   59 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGA---RLVACDIEE------GPLREAAEA--------------VGAHPVVMDVA   59 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHHT--------------TTCEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHHH--------------cCCeEEEEecC
Confidence            6899999999999999999999999996   778888753      233332211              24567899999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~  150 (152)
                      +++      ++++++       .++|++|||||....       .++|+..+++|+.+++.+.+++.+.   ++...+++
T Consensus        60 ~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~  133 (242)
T d1ulsa_          60 DPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVL  133 (242)
T ss_dssp             CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeee
Confidence            865      444443       478999999997542       5788999999999999999988653   23344554


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       134 ~s  135 (242)
T d1ulsa_         134 TA  135 (242)
T ss_dssp             EC
T ss_pred             ec
Confidence            43

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.71  E-value=6.3e-17  Score=113.22  Aligned_cols=119  Identities=17%  Similarity=0.151  Sum_probs=89.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+++||+++++.|+++|+   +|++.+|++.      .++++..            +...+..++.+|+
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~~~~~------~~~~~~~------------~~~~~~~~~~~Dv   61 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGA---KVAFSDINEA------AGQQLAA------------ELGERSMFVRHDV   61 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECSCHH------HHHHHHH------------HHCTTEEEECCCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH------------HhCCCeEEEEeec
Confidence            47899999999999999999999999996   6788887532      2222211            0135678889999


Q ss_pred             CCCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEe
Q psy11862         87 LQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM--KKLVVSLD  150 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~  150 (152)
                      ++++      +++++       +.++|++|||||....       .++|+..+++|+.+++.+.+++.+.  .+..++|+
T Consensus        62 ~~~~------~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~  135 (253)
T d1hxha_          62 SSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIIN  135 (253)
T ss_dssp             TCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceec
Confidence            9854      34333       3478999999997542       5778999999999999999988652  23467888


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       136 is  137 (253)
T d1hxha_         136 MA  137 (253)
T ss_dssp             EC
T ss_pred             cc
Confidence            75

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=6.3e-17  Score=112.54  Aligned_cols=117  Identities=17%  Similarity=0.198  Sum_probs=88.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ++||+++||||+++||+++++.|++.|+   +|++.+|++      +.+.++...             ...+..+.+|++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~------~~l~~~~~~-------------~~~~~~~~~Dv~   60 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGA---KVVAVTRTN------SDLVSLAKE-------------CPGIEPVCVDLG   60 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHHH-------------STTCEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHHh-------------cCCCeEEEEeCC
Confidence            6899999999999999999999999996   778888753      233322211             245778899999


Q ss_pred             CCCCCCChhHHHHHhc---cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc----CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE---EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM----KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~S  152 (152)
                      +++      ++++.++   ++|++|||||....       .++|+..+++|+.+++.+.+++.+.    +...++|++|
T Consensus        61 ~~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~is  133 (242)
T d1cyda_          61 DWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVS  133 (242)
T ss_dssp             CHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CHH------HHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccc
Confidence            864      5665554   78999999997542       6778889999999999998876531    2345777764

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.9e-17  Score=114.08  Aligned_cols=117  Identities=25%  Similarity=0.305  Sum_probs=88.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ++||+++||||+++||+++++.|+++|+   +|++.+|++      +.++++...             ..+..++.+|++
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~------~~~~~~~~~-------------~~~~~~~~~Dvs   61 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGA---RVVICDKDE------SGGRALEQE-------------LPGAVFILCDVT   61 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHHH-------------CTTEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHHh-------------cCCCeEEEccCC
Confidence            6899999999999999999999999996   778888753      233332211             256788999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEe
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLD  150 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~  150 (152)
                      +++      ++++++       .++|++|||||...        ..+.|+..+++|+.+++.+.+++.+.  .+..++|+
T Consensus        62 ~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~  135 (250)
T d1ydea1          62 QED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVIN  135 (250)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CHH------HHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcc
Confidence            965      444443       47899999999542        14668889999999999999988642  12257777


Q ss_pred             cC
Q psy11862        151 IG  152 (152)
Q Consensus       151 ~S  152 (152)
                      +|
T Consensus       136 is  137 (250)
T d1ydea1         136 IS  137 (250)
T ss_dssp             EC
T ss_pred             cc
Confidence            65

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.1e-16  Score=116.16  Aligned_cols=120  Identities=22%  Similarity=0.195  Sum_probs=87.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC----CCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR----GLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ++||||||+||||++|+++|++.|+   .|++++|...    .....+.+.....            ....++.++.+|+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~---~V~~ld~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~Dl   67 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY---LPVVIDNFHNAFRGGGSLPESLRRVQE------------LTGRSVEFEEMDI   67 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC---CEEEEECSSSSCBCSSSSBHHHHHHHH------------HHTCCCEEEECCT
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC---EEEEEECCCccccccccchHHHHHHHH------------hcCCCcEEEEeec
Confidence            6899999999999999999999998   4566654211    1122222222110            0136789999999


Q ss_pred             CCCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +|.+      .+.+.+.  .+++++|+||..+.   ..++...++.|+.++.++++++.+. ++++|+++|
T Consensus        68 ~d~~------~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~s  131 (346)
T d1ek6a_          68 LDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSS  131 (346)
T ss_dssp             TCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             cccc------cccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Ccccccccc
Confidence            9854      5777665  56789999997664   2345668899999999999999987 788998875

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.69  E-value=2.3e-16  Score=110.71  Aligned_cols=112  Identities=13%  Similarity=0.112  Sum_probs=86.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+++||+++++.|++.|+   +|++.+|+..  .+.+..+++...            .+.++.++.+|+
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~~--~~~~~~~~~~~~------------~g~~~~~~~~Dv   68 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGA---NVAVIYRSAA--DAVEVTEKVGKE------------FGVKTKAYQCDV   68 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCT--THHHHHHHHHHH------------HTCCEEEEECCT
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHHH------------hCCceEEEEccC
Confidence            37899999999999999999999999996   7888888764  344443333211            136788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      ++++      ++.+++       .++|++|||||...       ..++|+..+++|+.+++.+.+++.+
T Consensus        69 ~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  131 (260)
T d1h5qa_          69 SNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK  131 (260)
T ss_dssp             TCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCHH------HHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcc
Confidence            9965      444443       47899999998654       2567888999999999999887754

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.69  E-value=1.2e-16  Score=116.02  Aligned_cols=120  Identities=25%  Similarity=0.241  Sum_probs=90.2

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++|+||||||+||||+++++.|++.|+   .|+.++|......  ..+...              .....++++.+|++
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~---~V~~~~r~~~~~~--~~~~~~--------------~~~~~i~~~~~Dl~   66 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGA---TVKGYSLTAPTVP--SLFETA--------------RVADGMQSEIGDIR   66 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCSSSS--CHHHHT--------------TTTTTSEEEECCTT
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCccH--HHHhhh--------------hcccCCeEEEeecc
Confidence            5789999999999999999999999997   6788888764321  111111              01257889999999


Q ss_pred             CCCCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      |++      .+.+.++  .+|+++|+|+....   ...+...+++|+.++.++++++........+++.|
T Consensus        67 d~~------~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s  130 (356)
T d1rkxa_          67 DQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT  130 (356)
T ss_dssp             CHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred             ChH------hhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccc
Confidence            854      5766665  57999999997653   34566789999999999999999874445555543

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.69  E-value=1.5e-16  Score=111.45  Aligned_cols=118  Identities=17%  Similarity=0.142  Sum_probs=86.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |.++||||+++||+++++.|+++|+   +|++.+|++.  .+.+..+++..             ...++.++.+|+++++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga---~V~~~~r~~~--~l~~~~~~i~~-------------~g~~~~~~~~Dv~~~~   63 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGF---AVAIADYNDA--TAKAVASEINQ-------------AGGHAVAVKVDVSDRD   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTTSHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEeeCCCHH
Confidence            5679999999999999999999996   7788888532  22222222221             1367889999999965


Q ss_pred             CCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHh----cCCCcceEecC
Q psy11862         91 LGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALK----MKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~S  152 (152)
                            ++.++       +.++|++|||||...       ..+.|+..+++|+.+++++.+++.+    .+...+++++|
T Consensus        64 ------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~is  137 (255)
T d1gega_          64 ------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINAC  137 (255)
T ss_dssp             ------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             ------HHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcccccccccc
Confidence                  44443       347899999999754       2677888999999999999988754    22345677764

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.69  E-value=1.1e-16  Score=111.97  Aligned_cols=127  Identities=16%  Similarity=0.185  Sum_probs=88.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||++++++|+++|.   +|+++.|+...   .+.+.++..           .....++.++.+|++
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~---~vii~~r~~~~---~~~~~~~~~-----------~~~~~~~~~~~~d~~   65 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNL---KNFVILDRVEN---PTALAELKA-----------INPKVNITFHTYDVT   65 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCC---SEEEEEESSCC---HHHHHHHHH-----------HCTTSEEEEEECCTT
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEECCccc---HHHHHHHHh-----------hCCCCCEEEEEeecC
Confidence            7899999999999999999999999986   56677676542   222222211           011357889999998


Q ss_pred             CCCCCCC--hhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhc------CCCcceEecC
Q psy11862         88 QANLGIK--DSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKM------KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~--~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~S  152 (152)
                      ++...+.  .+.+.+.+.++|++|||||... .+.|+.++++|+.+++++.+++.+.      +...++|++|
T Consensus        66 ~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~is  137 (254)
T d1sbya1          66 VPVAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC  137 (254)
T ss_dssp             SCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEe
Confidence            5321000  1222333457999999999765 6779999999999999999988652      1235677765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=3.8e-16  Score=112.97  Aligned_cols=109  Identities=23%  Similarity=0.294  Sum_probs=82.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+||||||+||||++++++|+++|+  ..|+++++.....      ..+              ....+++++.+|+++..
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~--~~V~~ld~~~~~~------~~~--------------~~~~~~~~i~~Di~~~~   58 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAI------SRF--------------LNHPHFHFVEGDISIHS   58 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGG------GGG--------------TTCTTEEEEECCTTTCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCCcch------hhh--------------ccCCCeEEEECccCChH
Confidence            5799999999999999999999974  3688887643210      000              01367999999998865


Q ss_pred             CCCChhHH-HHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcce
Q psy11862         91 LGIKDSDL-LMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVS  148 (152)
Q Consensus        91 ~~~~~~~~-~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  148 (152)
                            ++ +...+++|+|||+|+....   ..+....+..|+.++.++++++.+. +.+.+
T Consensus        59 ------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~~~~  113 (342)
T d2blla1          59 ------EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RKRII  113 (342)
T ss_dssp             ------HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCEEE
T ss_pred             ------HHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-ccccc
Confidence                  34 3466789999999998764   3334568999999999999999987 55443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2e-16  Score=113.01  Aligned_cols=127  Identities=19%  Similarity=0.209  Sum_probs=90.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+++||+++++.|++.|+   +|++.+|+..  .+.+..+++...        .......++..+.+|+
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga---~Vvi~~r~~~--~l~~~~~el~~~--------~~~~~~~~~~~~~~Dv   75 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGS---NVVIASRKLE--RLKSAADELQAN--------LPPTKQARVIPIQCNI   75 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHHT--------SCTTCCCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHhh--------hccccCceEEEEeccC
Confidence            57999999999999999999999999996   7788888533  222222222110        0111246789999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      ++.+++       .++|++|||||...       ..+.|+..+++|+.+++.+.+++.+.   ++..++|
T Consensus        76 s~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii  149 (297)
T d1yxma1          76 RNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIV  149 (297)
T ss_dssp             TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccc
Confidence            9965      444443       47899999998654       26788889999999999999988643   1234555


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       150 ~~s  152 (297)
T d1yxma1         150 NII  152 (297)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.9e-16  Score=109.81  Aligned_cols=122  Identities=16%  Similarity=0.166  Sum_probs=89.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .+||+++||||+++||+++++.|+++|+   +|++.+|+..  .+.+...++...           ....++.++.+|++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga---~V~i~~r~~~--~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~   64 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGA---KVALVDWNLE--AGVQCKAALHEQ-----------FEPQKTLFIQCDVA   64 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHTTT-----------SCGGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHHh-----------cCCCcEEEEEeecC
Confidence            4799999999999999999999999996   7888888533  222222222111           11357889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhc------CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKM------KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~S  152 (152)
                      +++      ++++++       .++|++|||||... ..+|++.+++|+.+++++.+++.+.      +...++|++|
T Consensus        65 ~~~------~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~is  135 (254)
T d2gdza1          65 DQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS  135 (254)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CHH------HHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeec
Confidence            965      444443       47899999999864 5678999999999999988887642      1124588775

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.67  E-value=3e-16  Score=110.01  Aligned_cols=121  Identities=19%  Similarity=0.226  Sum_probs=89.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||++++++|++.|+   +|++.+|++.  .+.+..+.+..             ....+.++.+|++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~---~V~i~~r~~~--~l~~~~~~~~~-------------~~~~~~~~~~D~s   65 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGA---RVYTCSRNEK--ELDECLEIWRE-------------KGLNVEGSVCDLL   65 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHh-------------cCCCceEEEeecC
Confidence            7899999999999999999999999996   7788888632  22222222221             1367888899999


Q ss_pred             CCCCCCChhHHHHH-------h-ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         88 QANLGIKDSDLLML-------Q-EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~-~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      +++      +++++       + ..+|+++|+||...       ..++|..++++|+.+++.+.+++.+.   +...++|
T Consensus        66 ~~~------~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii  139 (258)
T d1ae1a_          66 SRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVI  139 (258)
T ss_dssp             CHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             CHH------HHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccc
Confidence            865      34333       2 24799999999765       26788999999999999999887542   2456777


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       140 ~is  142 (258)
T d1ae1a_         140 FLS  142 (258)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            765

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.67  E-value=3.5e-16  Score=110.58  Aligned_cols=124  Identities=13%  Similarity=0.152  Sum_probs=88.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ++||+++||||+++||+++++.|++.|+   +|++.+|+..  .+.+..+++...          .....++.++.+|++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~~--~l~~~~~~i~~~----------~~~~~~~~~~~~Dv~   66 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGA---QVTITGRNED--RLEETKQQILKA----------GVPAEKINAVVADVT   66 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHHT----------TCCGGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHHc----------CCCCcceEEEEeeCC
Confidence            6899999999999999999999999996   7788888532  222222222211          011247889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc---------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcce
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLLDIALKM---KKLVVS  148 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~  148 (152)
                      +++      ++++++       .++|++|||||...         ..+.|+..+++|+.+++.+.+++.+.   ++..++
T Consensus        67 ~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~i  140 (274)
T d1xhla_          67 EAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIV  140 (274)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             CHH------HHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccc
Confidence            965      444443       47899999998542         13568889999999999999888652   234566


Q ss_pred             EecC
Q psy11862        149 LDIG  152 (152)
Q Consensus       149 v~~S  152 (152)
                      +++|
T Consensus       141 i~~s  144 (274)
T d1xhla_         141 NVSS  144 (274)
T ss_dssp             EECC
T ss_pred             cchh
Confidence            6654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.67  E-value=2.9e-16  Score=110.83  Aligned_cols=113  Identities=12%  Similarity=0.140  Sum_probs=83.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++.+|++.  .+.+..+++.+.          .....++.++.+|++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~l~~r~~~--~l~~~~~~l~~~----------~~~~~~~~~~~~Dvs   67 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGA---NVTITGRSSE--RLEETRQIILKS----------GVSEKQVNSVVADVT   67 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHTT----------TCCGGGEEEEECCTT
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHhc----------CCCCCceEEEEccCC
Confidence            7899999999999999999999999996   7888888642  222222222221          111257889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-----------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-----------EAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      +++      ++++++       .++|++|||||....           .+.|+..+++|+.+++.+.+++.+
T Consensus        68 ~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p  133 (272)
T d1xkqa_          68 TED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKP  133 (272)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CHH------HHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcc
Confidence            965      444443       478999999997531           235888999999999999998765

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=4.9e-16  Score=111.34  Aligned_cols=118  Identities=24%  Similarity=0.178  Sum_probs=89.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+||||||+||||+++++.|++.||   +|+.++|...... .+++..+..              ..++.++.+|+++..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~---~V~~~~r~~~~~~-~~~l~~~~~--------------~~~~~~~~~Dl~d~~   62 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY---RVHGLVARRSSDT-RWRLRELGI--------------EGDIQYEDGDMADAC   62 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCC-CHHHHHTTC--------------GGGEEEEECCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCCCccc-HHHHHHhcc--------------cCCcEEEEccccChH
Confidence            6899999999999999999999998   6788888754322 234443322              257899999999854


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            .+.+.+.  ..++++|+++....   ..+...++..|+.++.++++++.+.+..++|++.|
T Consensus        63 ------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~S  123 (321)
T d1rpna_          63 ------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAS  123 (321)
T ss_dssp             ------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             ------HhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCccccccc
Confidence                  5666555  46788888876553   34566789999999999999999874445677654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.66  E-value=2.7e-16  Score=109.12  Aligned_cols=121  Identities=17%  Similarity=0.173  Sum_probs=87.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCC----cEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDI----GKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +.++||||+++||+++++.|+++|+++    ..|++.+|+..  .+.+...++..             .+.++.++.+|+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~--~l~~~~~~~~~-------------~g~~~~~~~~Dv   66 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA--DLEKISLECRA-------------EGALTDTITADI   66 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH--HHHHHHHHHHT-------------TTCEEEEEECCT
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHH--HHHHHHHHHHh-------------cCCcEEEEEecC
Confidence            468999999999999999999999752    13677777532  22222222221             246788999999


Q ss_pred             CCCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceE
Q psy11862         87 LQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSL  149 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v  149 (152)
                      ++++      +++++       +.++|++|||||....       .++|+.++++|+.+++.+.+++.+.   ++-.++|
T Consensus        67 t~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii  140 (240)
T d2bd0a1          67 SDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIF  140 (240)
T ss_dssp             TSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCHH------HHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceE
Confidence            9965      34433       3478999999997542       6788999999999999999988652   2346788


Q ss_pred             ecC
Q psy11862        150 DIG  152 (152)
Q Consensus       150 ~~S  152 (152)
                      ++|
T Consensus       141 ~is  143 (240)
T d2bd0a1         141 FIT  143 (240)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            775

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.9e-16  Score=111.95  Aligned_cols=110  Identities=23%  Similarity=0.330  Sum_probs=79.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+||||+|++|++++++|++.|+   .|++++|.....  .+.+...              .....+.....|+.+..
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~---~V~~~d~~~~~~--~~~~~~~--------------~~~~~~d~~~~~~~~~~   62 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH---EVTVVDNFFTGR--KRNVEHW--------------IGHENFELINHDVVEPL   62 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCC--GGGTGGG--------------TTCTTEEEEECCTTSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCCcCC--HHHHHHh--------------cCCCceEEEehHHHHHH
Confidence            7899999999999999999999997   567777643221  1111111              11245666666665432


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                                 +.++|+|||+|+..+.   ..++...+++|+.++.++++++.+. ++ ++|++|
T Consensus        63 -----------~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~S  114 (312)
T d2b69a1          63 -----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLAS  114 (312)
T ss_dssp             -----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEE
T ss_pred             -----------HcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEE
Confidence                       3579999999997653   3456778999999999999999987 44 788875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.66  E-value=3.4e-16  Score=110.03  Aligned_cols=113  Identities=14%  Similarity=0.157  Sum_probs=82.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||++++++|++.|+   +|++.+|+..  .+.+..+++...          .....++.++.+|++
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~--~l~~~~~~l~~~----------~~~~~~~~~~~~Dvt   67 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGA---KVTITGRHAE--RLEETRQQILAA----------GVSEQNVNSVVADVT   67 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHHT----------TCCGGGEEEEECCTT
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHHhc----------CCCcCceEEEEccCC
Confidence            6899999999999999999999999996   7788888632  222222222211          111246889999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      +++      ++++++       .++|++|||||...           ..+.|+..+++|+.+++.+.+++.+
T Consensus        68 ~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p  133 (264)
T d1spxa_          68 TDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVP  133 (264)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CHH------HHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCC
Confidence            865      444443       47899999998642           1356888999999999999998865

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.66  E-value=5.2e-16  Score=107.93  Aligned_cols=119  Identities=20%  Similarity=0.207  Sum_probs=85.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      +.++||||+++||++++++|++.|+   +|++..++..  +..+.+.+..            ...+.++.++.+|+++++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga---~V~i~~~~~~--~~~~~~~~~~------------~~~g~~~~~~~~Dv~~~~   64 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGC---KVLVNYARSA--KAAEEVSKQI------------EAYGGQAITFGGDVSKEA   64 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHH------------HHHTCEEEEEECCTTSHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCH--HHHHHHHHHH------------HHcCCcEEEEeCCCCCHH
Confidence            5899999999999999999999996   5665544321  1122221111            111367889999999965


Q ss_pred             CCCChhHHHHHh-------ccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         91 LGIKDSDLLMLQ-------EEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~-------~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                            ++++++       .++|++|||||...       ..+.|+..+++|+.+++.+.+++.+.   ++..++|++|
T Consensus        65 ------~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnis  137 (244)
T d1edoa_          65 ------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIA  137 (244)
T ss_dssp             ------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             ------HHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEc
Confidence                  444443       47899999999764       26788899999999999999988642   2456888876

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.66  E-value=7.3e-16  Score=111.80  Aligned_cols=117  Identities=25%  Similarity=0.328  Sum_probs=87.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ||+||||||+|+||++++++|++.|+++ .++.+++...... ...+.               .....++.++.+|+.|.
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v-~v~~~d~~~~~~~-~~~~~---------------~~~~~~i~~~~~Di~d~   64 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGN-KANLE---------------AILGDRVELVVGDIADA   64 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCC-GGGTG---------------GGCSSSEEEEECCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCe-EEEEEeCCCcccc-HHHHH---------------HhhcCCeEEEEccCCCH
Confidence            6899999999999999999999999876 4555553222111 11111               11236899999999885


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                      +      .+..++.+.+.++|+|+....   ..+....+++|+.++.++++++... +. +++++
T Consensus        65 ~------~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~~-k~i~~  121 (346)
T d1oc2a_          65 E------LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHV  121 (346)
T ss_dssp             H------HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEE
T ss_pred             H------HHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-cc-ccccc
Confidence            4      688889999999999987654   3445668899999999999999887 43 55554

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.65  E-value=9.2e-16  Score=106.50  Aligned_cols=108  Identities=19%  Similarity=0.184  Sum_probs=83.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++..|+..      ++.+...            ....++.++.+|++
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~---~V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dls   61 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGA---SLVAVDREER------LLAEAVA------------ALEAEAIAVVADVS   61 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHHHHH------------TCCSSEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHHHHHH------------HcCCceEEEEecCC
Confidence            6899999999999999999999999996   7788887532      2222211            11367888999999


Q ss_pred             CCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         88 QANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      +++      ++++++       .++|++|||||....       .+.|+..+++|+.++..+.+++.+.
T Consensus        62 ~~~------~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~  124 (241)
T d2a4ka1          62 DPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV  124 (241)
T ss_dssp             SHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHH------HHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccc
Confidence            865      444433       478999999987542       5778889999999999999998764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.65  E-value=2.6e-15  Score=103.72  Aligned_cols=113  Identities=19%  Similarity=0.173  Sum_probs=85.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++.+|++      +.+++                  ....++.+|++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga---~V~~~~r~~------~~l~~------------------~~~~~~~~Dv~   54 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGA---EVTICARNE------ELLKR------------------SGHRYVVCDLR   54 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHH------------------TCSEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHh------------------cCCcEEEcchH
Confidence            6899999999999999999999999996   778888752      22322                  23456788997


Q ss_pred             CCCCCCChhHHHHHhccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +.     .+.+.+.+.++|++|||||...       ..++|+..+++|+.+++.+.+++.+.   ++..++|++|
T Consensus        55 ~~-----~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~  124 (234)
T d1o5ia_          55 KD-----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAIT  124 (234)
T ss_dssp             TC-----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             HH-----HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccc
Confidence            63     3456666779999999999654       25778889999999999998887542   2345666654

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.65  E-value=1.4e-15  Score=106.38  Aligned_cols=124  Identities=23%  Similarity=0.324  Sum_probs=93.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC-CCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG-LTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +-.+++++||||+|+||.+++++|+++|+  +.|++++|+... ....+.+.++...             +.++.++.+|
T Consensus         6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l~~~-------------g~~v~~~~~D   70 (259)
T d2fr1a1           6 WKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAELEAL-------------GARTTVAACD   70 (259)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHHHHT-------------TCEEEEEECC
T ss_pred             cCCcCEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCccCHHHHHHHHHHHHhc-------------cccccccccc
Confidence            34567999999999999999999999986  467788886432 3344444443322             3689999999


Q ss_pred             cCCCCCCCChhHHHHHhc------cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         86 ILQANLGIKDSDLLMLQE------EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~------~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      ++|++      ++.+++.      ++|.++|++|....       ...++..+++|+.+++++.++.... ..++||++|
T Consensus        71 v~d~~------~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~S  143 (259)
T d2fr1a1          71 VTDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFS  143 (259)
T ss_dssp             TTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEE
T ss_pred             cchHH------HHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeeec
Confidence            99954      5655554      47999999997652       5667778999999999999887765 566888765

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.64  E-value=8.5e-16  Score=110.43  Aligned_cols=120  Identities=28%  Similarity=0.296  Sum_probs=89.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCc---EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIG---KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |+|+||||+|+||+++++.|+++|+.+.   +++.+++....... ..+...              ....++.++.+|+.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~-~~~~~~--------------~~~~~~~~~~~d~~   65 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLAPV--------------DADPRLRFVHGDIR   65 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGGGG--------------TTCTTEEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH-hHhhhh--------------hcCCCeEEEEeccc
Confidence            5899999999999999999999988654   34555543222111 111111              12368999999998


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      +..      ........+|.|+|+|+....   ..+....+++|+.++.++++++.+. ++++||++|
T Consensus        66 ~~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~S  126 (322)
T d1r6da_          66 DAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVS  126 (322)
T ss_dssp             CHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             cch------hhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEee
Confidence            854      566777799999999987653   4455668899999999999999987 688999876

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.64  E-value=2e-15  Score=106.40  Aligned_cols=117  Identities=20%  Similarity=0.227  Sum_probs=87.7

Q ss_pred             cccccccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHH-HHHhcChhhhhhhhhccccCCcEE
Q psy11862          2 GDVARWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARL-AEFSKLPVFERLRKECPAQLSRLH   80 (152)
Q Consensus         2 ~~~~~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
                      ++-+.+++||+++||||+++||+++++.|+++|+   +|++.+|+..  +..+.+ +.+..             ...++.
T Consensus        10 ~~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga---~Vvi~~~~~~--~~~~~~~~~~~~-------------~g~~~~   71 (272)
T d1g0oa_          10 GPQSASLEGKVALVTGAGRGIGREMAMELGRRGC---KVIVNYANST--ESAEEVVAAIKK-------------NGSDAA   71 (272)
T ss_dssp             SGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHHHH-------------TTCCEE
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCch--HHHHHHHHHHHh-------------hCCcee
Confidence            4455679999999999999999999999999996   6777776533  112222 22211             236788


Q ss_pred             EEEcccCCCCCCCChhHHHHH-------hccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         81 IIEGDILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        81 ~~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      ++.+|+++++      ++.+.       +.++|++||++|...       ..+.|...+++|+.+++.+.+++.+.
T Consensus        72 ~~~~D~~~~~------~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~  141 (272)
T d1g0oa_          72 CVKANVGVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH  141 (272)
T ss_dssp             EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             eEeCCCCCHH------HHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccc
Confidence            9999999855      34433       347899999998754       26778889999999999999998763

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.64  E-value=1.3e-15  Score=110.18  Aligned_cols=124  Identities=26%  Similarity=0.216  Sum_probs=92.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ++.|++|||||+|+||++++++|.+.|+   .|++++|..... ...+.+.....           ......+.++.+|.
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~---~V~~~d~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~d~   79 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQ---KVVGLDNFATGHQRNLDEVRSLVS-----------EKQWSNFKFIQGDI   79 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCHHHHHHHHHHSC-----------HHHHTTEEEEECCT
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcC---EEEEEECCCCcchhhHHHHHHhhh-----------hcccCCeeEEeecc
Confidence            3557999999999999999999999998   678887754322 11111222111           01125788999999


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .|..      .+.......+.++|+++....   ..++...+++|+.++.+++++|.+. ++++||++|
T Consensus        80 ~d~~------~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~S  141 (341)
T d1sb8a_          80 RNLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAA  141 (341)
T ss_dssp             TSHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred             cccc------ccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcc
Confidence            8843      567777789999999987653   4556668999999999999999998 688999876

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.64  E-value=5.2e-16  Score=109.75  Aligned_cols=118  Identities=21%  Similarity=0.271  Sum_probs=86.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++.+|++      ++++++...            ...++..+.+|++
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~------~~l~~~~~~------------~~~~~~~~~~Dv~   61 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGA---KVAVLDKSA------ERLAELETD------------HGDNVLGIVGDVR   61 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHHHHHH------------HGGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHHHHHHH------------cCCCeeEEecccc
Confidence            6899999999999999999999999996   778888753      333332211            1257889999999


Q ss_pred             CCCCCCChhHHHHH-------hccccEEEeccccccc------------hhhHHHHHHhhhHHHHHHHHHHHhc--CCCc
Q psy11862         88 QANLGIKDSDLLML-------QEEVSVVFNGAASLKL------------EAELKENVAANTRGTQRLLDIALKM--KKLV  146 (152)
Q Consensus        88 ~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~  146 (152)
                      +++      +++++       +.++|++|||||....            .+.|+..+++|+.+++.+.+++.+.  .+..
T Consensus        62 ~~~------~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g  135 (276)
T d1bdba_          62 SLE------DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRG  135 (276)
T ss_dssp             CHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             cHH------HHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            865      34333       3478999999996431            2348889999999999999888642  1124


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       136 ~iI~i~  141 (276)
T d1bdba_         136 NVIFTI  141 (276)
T ss_dssp             EEEEEC
T ss_pred             Cceeee
Confidence            555543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=5e-16  Score=109.71  Aligned_cols=124  Identities=18%  Similarity=0.108  Sum_probs=85.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +.++||||+++||.+++++|++. |+   .|++.+|+..  .+++..+++...             ..++.++.+|+++.
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~---~Vi~~~r~~~--~~~~~~~~l~~~-------------~~~~~~~~~Dvs~~   65 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSG---DVVLTARDVT--RGQAAVQQLQAE-------------GLSPRFHQLDIDDL   65 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSS---EEEEEESSHH--HHHHHHHHHHHT-------------TCCCEEEECCTTCH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCC---EEEEEECCHH--HHHHHHHHHHhc-------------CCcEEEEEEecCCH
Confidence            45699999999999999999987 64   7888888643  233333333221             35788999999996


Q ss_pred             CCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         90 NLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      +..-. .+++.+.+.++|++|||||....       .+.++..+++|+.+++.+.+++.+. ..-.++|++|
T Consensus        66 ~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnis  137 (275)
T d1wmaa1          66 QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS  137 (275)
T ss_dssp             HHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             HHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence            51000 11222333478999999997542       4567779999999999999998763 1224677664

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.64  E-value=1e-15  Score=106.69  Aligned_cols=109  Identities=22%  Similarity=0.228  Sum_probs=80.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      |+.|+|+||||+++||.+++++|+++|+.+ .|++.+|+...   .+.+.+               ....++.++.+|++
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~-~Vi~~~R~~~~---~~~l~~---------------~~~~~~~~~~~Dvs   61 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEK---ATELKS---------------IKDSRVHVLPLTVT   61 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGG---CHHHHT---------------CCCTTEEEEECCTT
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCC-EEEEEeCCHHH---HHHHHH---------------hhCCceEEEEEecC
Confidence            456899999999999999999999998644 67777876431   111211               12367899999999


Q ss_pred             CCCCCCChhHHHHHh-------c--cccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         88 QANLGIKDSDLLMLQ-------E--EVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~-------~--~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      +.+      ++++++       .  ++|++|||||....        .+.+++.+++|+.+++.+.+++.+
T Consensus        62 ~~~------~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  126 (250)
T d1yo6a1          62 CDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLP  126 (250)
T ss_dssp             CHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred             CHH------HHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            864      333332       2  38999999996431        456788999999999999888753

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1e-15  Score=110.75  Aligned_cols=124  Identities=23%  Similarity=0.225  Sum_probs=86.2

Q ss_pred             ceE-EEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSV-LVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~i-lItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      |+| |||||+||||++++++|++.|+   .|+.++|..+..+. .+++.+...        ........+.++.+|++|+
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~---~V~~i~r~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~Dl~d~   68 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY---EVHGIVRRSSSFNT-GRIEHLYKN--------PQAHIEGNMKLHYGDLTDS   68 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCC-TTTGGGC-----------------CEEEEECCTTCH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC---EEEEEECCCcccch-hhHHHHhhc--------hhhhccCCcEEEEeecCCc
Confidence            466 9999999999999999999998   77888886542211 011111000        0011125789999999985


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcC--CCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMK--KLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~S  152 (152)
                      .      .+..++.  ++++++|+++....   ..+....+++|+.++.++++++.+.+  +.++||++|
T Consensus        69 ~------~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~S  132 (347)
T d1t2aa_          69 T------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAS  132 (347)
T ss_dssp             H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred             h------hhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEec
Confidence            4      5777765  56899999987654   34455578999999999999999863  234788876

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=1e-15  Score=109.42  Aligned_cols=98  Identities=15%  Similarity=0.187  Sum_probs=75.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .|+|+||||+|+||++|+++|++.|+   .++.+++..                                   ..|+.+.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~---~vi~~~~~~-----------------------------------~~~~~~~   43 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGD---VELVLRTRD-----------------------------------ELNLLDS   43 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT---EEEECCCTT-----------------------------------TCCTTCH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcC---EEEEecCch-----------------------------------hccccCH
Confidence            47899999999999999999999986   344443211                                   1466663


Q ss_pred             CCCCChhHHHHHhc--cccEEEeccccccc----hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQE--EVSVVFNGAASLKL----EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~--~~d~vi~~a~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .      .+...+.  .+|.++|+|+....    ..+..+.++.|+.++.+++++|.+. ++++|||+|
T Consensus        44 ~------~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~S  105 (315)
T d1e6ua_          44 R------AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLG  105 (315)
T ss_dssp             H------HHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             H------HHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence            3      5666655  58999999976542    3455667899999999999999998 789999987

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.3e-15  Score=103.87  Aligned_cols=119  Identities=17%  Similarity=0.187  Sum_probs=88.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++.+|++      ++++++.+              ...+....+|+.
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~---~Vi~~~r~~------~~l~~~~~--------------~~~~~~~~~d~~   60 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGA---KVIATDINE------SKLQELEK--------------YPGIQTRVLDVT   60 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHGGGGG--------------STTEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCH------HHHHHHHh--------------ccCCceeeeecc
Confidence            7899999999999999999999999996   778888852      33433322              245777788876


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      +.+.   .+.+...+.++|++||++|....       .+.|+..+++|+.+++.+.+++.+.   .+..++|++|
T Consensus        61 ~~~~---~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~is  132 (245)
T d2ag5a1          61 KKKQ---IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMS  132 (245)
T ss_dssp             CHHH---HHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             cccc---ccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeee
Confidence            6432   23344445689999999997642       6788889999999999999888642   2345777664

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.62  E-value=8.8e-16  Score=112.76  Aligned_cols=127  Identities=21%  Similarity=0.171  Sum_probs=85.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeec---CCCC----CCHHHHHHHHhcChhhhhhhhhccccCCcEEE
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCR---AKRG----LTPKARLAEFSKLPVFERLRKECPAQLSRLHI   81 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (152)
                      .|+||||||+||||++++++|++. |+   .|+++++   +...    ....+....+...     ...........+.+
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~---~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   73 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNH---SVVIVDSLVGTHGKSDHVETRENVARKLQQS-----DGPKPPWADRYAAL   73 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC---EEEEEECCTTTTTCCTTSCCHHHHHHHHHHS-----CSSCCTTTTCCCEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCC---EEEEEecCCcccccchhhhhhhhHHHHhhhh-----ccccccccccceEE
Confidence            579999999999999999999874 65   6677653   2111    1112211111110     00001122356789


Q ss_pred             EEcccCCCCCCCChhHHHHHhc---cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         82 IEGDILQANLGIKDSDLLMLQE---EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        82 ~~~D~~~~~~~~~~~~~~~~~~---~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                      +.+|++|.+      .+.++++   ++|+|||+|+....   .......++.|+.++.++++++.+. ++++++++
T Consensus        74 ~~~Di~d~~------~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~  142 (383)
T d1gy8a_          74 EVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFS  142 (383)
T ss_dssp             EESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             EECcccCHH------Hhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCcccccc
Confidence            999999965      4666654   67999999997653   3445557899999999999999997 66777654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.62  E-value=6.3e-15  Score=102.53  Aligned_cols=113  Identities=25%  Similarity=0.309  Sum_probs=79.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ||+|+||||+++||++++++|++.+.+-.+|++.+|++...   +.++++...             ..++.++.+|++++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~---~~~~~~~~~-------------~~~~~~~~~Dvs~~   65 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA---KELEDLAKN-------------HSNIHILEIDLRNF   65 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC---HHHHHHHHH-------------CTTEEEEECCTTCG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH---HHHHHHHhc-------------CCcEEEEEEEeccH
Confidence            68999999999999999999975322213788899976532   223322211             36899999999997


Q ss_pred             CCCCChhHHHHH------hccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         90 NLGIKDSDLLML------QEEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        90 ~~~~~~~~~~~~------~~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      +.   .+++.+.      ..++|++|||||....        .+.++..+++|+.+++.+.+++.+
T Consensus        66 ~~---v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p  128 (248)
T d1snya_          66 DA---YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLP  128 (248)
T ss_dssp             GG---HHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HH---HHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHH
Confidence            62   2222221      2368999999996431        445777999999999999888753

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.61  E-value=2.8e-15  Score=107.20  Aligned_cols=130  Identities=18%  Similarity=0.134  Sum_probs=85.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC---CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL---TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      +++|+++||||+++||+++++.|+++|+   +|++.+|.....   ...+.+++...     ++.       .......+
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga---~Vvi~d~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~   69 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGA---LVVVNDLGGDFKGVGKGSSAADKVVE-----EIR-------RRGGKAVA   69 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSCBCCSHHHHHHHH-----HHH-------HTTCEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCchhhhhhhhHHHHHHHHH-----HHh-------hccccccc
Confidence            7899999999999999999999999996   677777654321   11112221111     000       11223456


Q ss_pred             ccCCCCCCCC-hhHHHHHhccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         85 DILQANLGIK-DSDLLMLQEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        85 D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      |+.+.+..-. .+...+.+.++|++|||||....       .++|+.++++|+.+++.+.+++.+.   ++-.++|++|
T Consensus        70 d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~is  148 (302)
T d1gz6a_          70 NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTA  148 (302)
T ss_dssp             ECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             ccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeC
Confidence            6666431000 11122334579999999997642       5788899999999999999987642   2456888876

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.61  E-value=2.4e-15  Score=105.32  Aligned_cols=113  Identities=18%  Similarity=0.153  Sum_probs=83.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      -++||+++||||+++||.++++.|++.|+   +|++..++..  +..+.+.+..            .....++..+.+|+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~---~Vvi~~~~~~--~~~~~~~~~~------------~~~g~~~~~~~~D~   65 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGA---SVVVNYGSSS--KAAEEVVAEL------------KKLGAQGVAIQADI   65 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHH------------HHTTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEcCCCh--HHHHHHHHHH------------HHcCCCceEecCCC
Confidence            37899999999999999999999999997   5666555432  2222222211            11236788999999


Q ss_pred             CCCCCCCChhHHHHHh-------ccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         87 LQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      ++++      ++...+       .++|++||+||....       .+.|+..+++|+.+++.+++++.+.
T Consensus        66 ~~~~------~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  129 (259)
T d1ja9a_          66 SKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH  129 (259)
T ss_dssp             TSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCHH------HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhh
Confidence            9855      444433       478999999997642       5778889999999999999998763

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=4.1e-15  Score=105.51  Aligned_cols=124  Identities=22%  Similarity=0.182  Sum_probs=89.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC-CHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL-TPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      .|.++||||++|||+++++.|++.|.++..++...|+.... .+.+....+             .....++.++.+|+++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~-------------~~~~~~~~~~~~Dv~~   68 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-------------ACPPGSLETLQLDVRD   68 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT-------------TCCTTSEEEEECCTTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHH-------------hccCCceEEEeccccc
Confidence            46789999999999999999999998765666666643221 111222222             1224689999999999


Q ss_pred             CCCCCChhHHHHHhc-----cccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         89 ANLGIKDSDLLMLQE-----EVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      ++      ++.++++     .+|+++|++|....       .+.|+..+++|+.++.++.+++.+.   ++..++|++|
T Consensus        69 ~~------~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~is  141 (285)
T d1jtva_          69 SK------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTG  141 (285)
T ss_dssp             HH------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             hH------hhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEe
Confidence            65      5655543     68999999987542       5778889999999999999987642   2456888775

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.58  E-value=2.3e-15  Score=102.19  Aligned_cols=107  Identities=21%  Similarity=0.181  Sum_probs=77.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+||||||++|++++++|+++|+- .+|++++|++...                         ...+.....|+.+  
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~-~~v~~~~r~~~~~-------------------------~~~~~~~~~d~~~--   54 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALAE-------------------------HPRLDNPVGPLAE--   54 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCCC-------------------------CTTEECCBSCHHH--
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCe-EEEEEEeCCchhh-------------------------cccccccccchhh--
Confidence            79999999999999999999999863 4788888765421                         1233333333322  


Q ss_pred             CCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                            ....+...+|.+||++|... .......+...|+.++.+++++|++. ++++|+++|
T Consensus        55 ------~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~S  110 (212)
T d2a35a1          55 ------LLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVS  110 (212)
T ss_dssp             ------HGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             ------hhhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-ccccccccc
Confidence                  11222346899999998653 24445668899999999999999987 789999886

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.58  E-value=8.5e-15  Score=102.46  Aligned_cols=125  Identities=17%  Similarity=0.142  Sum_probs=88.7

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHh---hCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLR---SCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~---~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      +.+++|+++||||+++||++++++|++   .|+   +|++.+|+..  .+.+..+++..         .  ....++.++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~---~Vv~~~r~~~--~l~~~~~~l~~---------~--~~~~~~~~~   65 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGS---VMLVSARSES--MLRQLKEELGA---------Q--QPDLKVVLA   65 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTC---EEEEEESCHH--HHHHHHHHHHH---------H--CTTSEEEEE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCC---EEEEEECCHH--HHHHHHHHHHh---------h--cCCceEEEE
Confidence            458899999999999999999999986   564   7888888543  22222222211         1  113578899


Q ss_pred             EcccCCCCCCCChhHHHHHhc-----------cccEEEecccccc----------chhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         83 EGDILQANLGIKDSDLLMLQE-----------EVSVVFNGAASLK----------LEAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        83 ~~D~~~~~~~~~~~~~~~~~~-----------~~d~vi~~a~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      .+|+++++      ++.++++           .+|+++||||...          ..+.|+.++++|+.+++.+.+++.+
T Consensus        66 ~~Dvs~~~------~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  139 (259)
T d1oaaa_          66 AADLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLN  139 (259)
T ss_dssp             ECCTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EccCCCHH------HHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHH
Confidence            99999965      4554432           4689999998642          1357888999999999999999876


Q ss_pred             cC---C--CcceEecC
Q psy11862        142 MK---K--LVVSLDIG  152 (152)
Q Consensus       142 ~~---~--~~~~v~~S  152 (152)
                      .-   +  ..++|++|
T Consensus       140 ~m~~~~~~~g~Iv~is  155 (259)
T d1oaaa_         140 AFQDSPGLSKTVVNIS  155 (259)
T ss_dssp             TSCCCTTCEEEEEEEC
T ss_pred             HHHhcCCCcccccccc
Confidence            41   1  24677765

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.58  E-value=4.2e-15  Score=103.88  Aligned_cols=120  Identities=15%  Similarity=0.161  Sum_probs=84.7

Q ss_pred             cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++|+++||||+|  +||++++++|++.|+   +|++..|++.   ..+...+...             .......+.+|
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~Ga---~V~i~~~~~~---~~~~~~~~~~-------------~~~~~~~~~~D   66 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGA---EVALSYQAER---LRPEAEKLAE-------------ALGGALLFRAD   66 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHTTC---EEEEEESSGG---GHHHHHHHHH-------------HTTCCEEEECC
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCC---EEEEEeCcHH---HHHHHHHhhh-------------ccCcccccccc
Confidence            8999999999987  899999999999996   6666666532   2222222211             12456788999


Q ss_pred             cCCCCCCCChhHHHHH-------hccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCc
Q psy11862         86 ILQANLGIKDSDLLML-------QEEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM-KKLV  146 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~  146 (152)
                      +++++      +++++       +.++|++||+||...           ..++|...+++|+.+++.+.+++.+. .+-.
T Consensus        67 ~~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G  140 (256)
T d1ulua_          67 VTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGG  140 (256)
T ss_dssp             TTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE
T ss_pred             cCCHH------HHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCC
Confidence            99965      44444       347899999998642           13567778999999999999887653 1224


Q ss_pred             ceEecC
Q psy11862        147 VSLDIG  152 (152)
Q Consensus       147 ~~v~~S  152 (152)
                      ++|++|
T Consensus       141 ~Iv~is  146 (256)
T d1ulua_         141 GIVTLT  146 (256)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            666653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.56  E-value=1.1e-14  Score=99.52  Aligned_cols=105  Identities=17%  Similarity=0.171  Sum_probs=80.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++++|+||||+|+||++++++|++.|+++ .|+++.|++.      ....+                ..++.++.+|+.+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v-~v~~~~R~~~------~~~~~----------------~~~~~~~~~d~~~   58 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQ------GKEKI----------------GGEADVFIGDITD   58 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTC-EEEEEESCHH------HHHHT----------------TCCTTEEECCTTS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcE-EEEEEcCCHH------HHHhc----------------cCCcEEEEeeecc
Confidence            46899999999999999999999999876 6777777532      11111                2467788999988


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc----------------hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL----------------EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~----------------~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      .+      ++.+.++++|+|||+++....                .........+|+.++.+++..+...
T Consensus        59 ~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (252)
T d2q46a1          59 AD------SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA  122 (252)
T ss_dssp             HH------HHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH
T ss_pred             cc------ccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc
Confidence            54      688899999999999986431                1223336688999999999888765

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=6.1e-15  Score=103.81  Aligned_cols=130  Identities=15%  Similarity=0.147  Sum_probs=87.4

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +.++||+++||||++|||+++++.|+++|+   +|++.+|+..  .+.+..+++.            .........+.+|
T Consensus        10 ~~L~GK~alITGassGIG~aiA~~la~~G~---~Vil~~r~~~--~l~~~~~~~~------------~~~~~~~~~~~~d   72 (269)
T d1xu9a_          10 EMLQGKKVIVTGASKGIGREMAYHLAKMGA---HVVVTARSKE--TLQKVVSHCL------------ELGAASAHYIAGT   72 (269)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHH------------HHTCSEEEEEECC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH--HHHHHHHHHh------------hhhcccchhhhhh
Confidence            347999999999999999999999999996   7888998632  2222222211            1123567788888


Q ss_pred             cCCCCCCCC-hhHHHHHhccccEEEecccccc-------chhhHHHHHHhhhHHHHHHHHHHHhc--CCCcceEecC
Q psy11862         86 ILQANLGIK-DSDLLMLQEEVSVVFNGAASLK-------LEAELKENVAANTRGTQRLLDIALKM--KKLVVSLDIG  152 (152)
Q Consensus        86 ~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~S  152 (152)
                      +.+...... .+........+|+++++||...       ..+.+...+++|+.++..+.+++.+.  .+-.++|++|
T Consensus        73 ~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~is  149 (269)
T d1xu9a_          73 MEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVS  149 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEec
Confidence            876431000 1112233347899999998654       25667789999999999998887642  1224666654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=3.2e-14  Score=102.39  Aligned_cols=113  Identities=22%  Similarity=0.190  Sum_probs=79.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |++|||||+||||+++++.|++.||   .|++++|..+..+. +++..+...        ........+.++.+|+++..
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~---~V~~~~r~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~Di~~~~   69 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY---EVHGLIRRSSNFNT-QRINHIYID--------PHNVNKALMKLHYADLTDAS   69 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCC-TTTTTTC----------------CCEEEEECCTTCHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC---EEEEEECCCcccch-hhhhhhhhh--------hhhccccceEEEEccccCHH
Confidence            7899999999999999999999998   67888885431100 001100000        00011256788999998854


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccch---hhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKLE---AELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                            .+...+.  ++|+|||+|+.....   .++...+..|+.++.++++++..
T Consensus        70 ------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~  119 (339)
T d1n7ha_          70 ------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS  119 (339)
T ss_dssp             ------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ------HHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhh
Confidence                  5666665  679999999986643   45566889999999999998875

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.53  E-value=5.6e-14  Score=99.82  Aligned_cols=110  Identities=20%  Similarity=0.184  Sum_probs=79.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .++||+++||||+|+||++++++|++.|+   +|++.+|+..  .+.+...++..            ..+..+.++.+|+
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga---~Vii~~r~~~--~l~~~~~~l~~------------~~g~~~~~~~~D~   84 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGA---QCVIASRKMD--VLKATAEQISS------------QTGNKVHAIQCDV   84 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH--HHHHHHHHHHH------------HHSSCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHH--HHHHHHHHHHH------------hcCCceEEEEecc
Confidence            58999999999999999999999999996   7888888643  22222222221            1136788999999


Q ss_pred             CCCCCCCChhHHHHH-------hccccEEEeccccccc-------hhhHHHHHHhhhHHHHHHHHHH
Q psy11862         87 LQANLGIKDSDLLML-------QEEVSVVFNGAASLKL-------EAELKENVAANTRGTQRLLDIA  139 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~-------~~~~d~vi~~a~~~~~-------~~~~~~~~~~n~~~~~~l~~~~  139 (152)
                      ++++      ++...       +.++|++||+||....       ...+...+.+|......+....
T Consensus        85 ~~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  145 (294)
T d1w6ua_          85 RDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI  145 (294)
T ss_dssp             TCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cChH------HHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhh
Confidence            9855      34333       3478999999996542       4556677888888877776554

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.51  E-value=2e-14  Score=101.34  Aligned_cols=97  Identities=19%  Similarity=0.165  Sum_probs=72.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+||||||+|+||+++++.|.+.|    .++.+.++...                                +.+|+++.+
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g----~~v~~~~~~~~--------------------------------~~~Dl~~~~   44 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVG----NLIALDVHSKE--------------------------------FCGDFSNPK   44 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTS----EEEEECTTCSS--------------------------------SCCCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC----CEEEEECCCcc--------------------------------ccCcCCCHH
Confidence            579999999999999999999987    34455543220                                136887743


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                            ++.+.++  ++|+|||+||....   .......++.|+.++.++++++.+. +. +++++
T Consensus        45 ------~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~~~~  102 (298)
T d1n2sa_          45 ------GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHY  102 (298)
T ss_dssp             ------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEE
T ss_pred             ------HHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-cc-ccccc
Confidence                  6777776  56999999997653   4556668899999999999999886 44 45544

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.47  E-value=1.2e-13  Score=96.30  Aligned_cols=117  Identities=14%  Similarity=0.031  Sum_probs=79.6

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      +++||||+++||+++++.|++.|+   +|++.+|+...   .+.+.....                  .+..+|+++++.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga---~V~i~~r~~~~---~~~~~~~~~------------------~~~~~dv~~~~~   57 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH---TVACHDESFKQ---KDELEAFAE------------------TYPQLKPMSEQE   57 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGS---HHHHHHHHH------------------HCTTSEECCCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHhhhC------------------cEEEeccCCHHH
Confidence            789999999999999999999996   77888876432   222222111                  012467777652


Q ss_pred             CCC-hhHHHHHhccccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc---CCCcceEecC
Q psy11862         92 GIK-DSDLLMLQEEVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM---KKLVVSLDIG  152 (152)
Q Consensus        92 ~~~-~~~~~~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~S  152 (152)
                      ... .+++.+.+.++|++|||||...        ..++|+..+++|+.+++.+.+++.+.   ++..++|++|
T Consensus        58 ~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~is  130 (252)
T d1zmta1          58 PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFIT  130 (252)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccc
Confidence            000 1223344458999999998642        14678889999999999999887542   2346788875

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.1e-12  Score=90.90  Aligned_cols=125  Identities=14%  Similarity=0.081  Sum_probs=85.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      +++||+++||||+++||.+++++|+++|+   +|++.+|+..  .+.+..+++                ........+|+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~---~V~~~~r~~~--~~~~~~~~l----------------~~~~~~~~~~~   60 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGA---SAVLLDLPNS--GGEAQAKKL----------------GNNCVFAPADV   60 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTS--SHHHHHHHH----------------CTTEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChH--HHHHHHHHh----------------CCCcccccccc
Confidence            58999999999999999999999999996   7788888754  344443333                24566777787


Q ss_pred             CCCCCCCC-hhHHHHHhccccEEEecccccc-------------chhhHHHHHHhhhHHHHHHHHHHHhc---------C
Q psy11862         87 LQANLGIK-DSDLLMLQEEVSVVFNGAASLK-------------LEAELKENVAANTRGTQRLLDIALKM---------K  143 (152)
Q Consensus        87 ~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~---------~  143 (152)
                      .+....-. ...........|.++++++...             ..+.|+.++++|+.+++++.+++.+.         .
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~  140 (248)
T d2o23a1          61 TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGG  140 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTS
T ss_pred             cccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccC
Confidence            76431000 0011222235688887765432             14578889999999999999998652         1


Q ss_pred             CCcceEecC
Q psy11862        144 KLVVSLDIG  152 (152)
Q Consensus       144 ~~~~~v~~S  152 (152)
                      +..++|++|
T Consensus       141 ~~G~Ii~is  149 (248)
T d2o23a1         141 QRGVIINTA  149 (248)
T ss_dssp             CCEEEEEEC
T ss_pred             CceEEEEec
Confidence            224678765

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.45  E-value=3.3e-13  Score=93.09  Aligned_cols=116  Identities=16%  Similarity=0.033  Sum_probs=76.0

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      ++|+++||||+|+||+++++.|++.|+   +|+++++.+...                         .........|..+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~---~V~~~~~~~~~~-------------------------~~~~~~~~~~~~~   52 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW---WVASIDVVENEE-------------------------ASASVIVKMTDSF   52 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSCCTT-------------------------SSEEEECCCCSCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCcccc-------------------------ccccceeecccCc
Confidence            589999999999999999999999997   677777754321                         1222233344333


Q ss_pred             CCCCCC-hhHHHHHhc--cccEEEecccccc--------chhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         89 ANLGIK-DSDLLMLQE--EVSVVFNGAASLK--------LEAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        89 ~~~~~~-~~~~~~~~~--~~d~vi~~a~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      ...... ...+.+.+.  ++|++|||||...        ..+.++..+++|+.++.++.+++.+. .+-.++|++|
T Consensus        53 ~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~is  128 (236)
T d1dhra_          53 TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAG  128 (236)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEc
Confidence            210000 011222222  5899999998532        14567778999999999999988763 2235777775

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.43  E-value=3e-13  Score=95.62  Aligned_cols=109  Identities=20%  Similarity=0.260  Sum_probs=78.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHH--HHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKA--RLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      .++|+||||||++|++++++|++.|+   .|++++|+........  .+..+.               ..++.++.+|+.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~---~V~~~~R~~~~~~~~~~~~~~~~~---------------~~~v~~v~~d~~   64 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGH---PTYVLFRPEVVSNIDKVQMLLYFK---------------QLGAKLIEASLD   64 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC---CEEEECCSCCSSCHHHHHHHHHHH---------------TTTCEEECCCSS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECCCcccchhHHHHHhhhc---------------cCCcEEEEeecc
Confidence            46799999999999999999999997   5678888765443321  111111               257889999998


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                      +.+      .+...+.+.+.++++++....        ..|..++.++++++..... .++++.
T Consensus        65 d~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~~~-~~~v~~  113 (312)
T d1qyda_          65 DHQ------RLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEAGN-IKRFLP  113 (312)
T ss_dssp             CHH------HHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHSCC-CSEEEC
T ss_pred             cch------hhhhhccCcchhhhhhhhccc--------ccchhhhhHHHHHHHHhcC-CcEEEE
Confidence            854      688889999999999875432        3455566778888888743 444444

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.42  E-value=5.2e-13  Score=91.95  Aligned_cols=115  Identities=15%  Similarity=0.070  Sum_probs=75.8

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ..+|+||||+++||.+++++|++.|+   +|++++|++...                         ........+|..+.
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~---~V~~~~~~~~~~-------------------------~~~~~~~~~~~~~~   53 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY---TVLNIDLSANDQ-------------------------ADSNILVDGNKNWT   53 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCCTT-------------------------SSEEEECCTTSCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCchhc-------------------------ccccceeccccCch
Confidence            46789999999999999999999996   788888875421                         12223334444332


Q ss_pred             CCCCC-hhHHHHHh--ccccEEEeccccccc--------hhhHHHHHHhhhHHHHHHHHHHHhc-CCCcceEecC
Q psy11862         90 NLGIK-DSDLLMLQ--EEVSVVFNGAASLKL--------EAELKENVAANTRGTQRLLDIALKM-KKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~-~~~~~~~~--~~~d~vi~~a~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  152 (152)
                      ..... .+.+...+  .++|++|||||....        .+.++.++++|+.+++.+.+++.+. ..-.++|++|
T Consensus        54 ~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~is  128 (235)
T d1ooea_          54 EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTG  128 (235)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEec
Confidence            20000 01122222  368999999995321        3557778999999999999988763 1225777765

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.40  E-value=5.9e-14  Score=93.99  Aligned_cols=84  Identities=17%  Similarity=0.152  Sum_probs=62.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+++|+++||||+|+||+++++.|+++|+   +|++++|+..  ...+..+.+..              ...+....+|+
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~---~V~~~~r~~~--~~~~~~~~~~~--------------~~~~~~~~~d~   80 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA---EVVLCGRKLD--KAQAAADSVNK--------------RFKVNVTAAET   80 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHH--HHHHHHHHHHH--------------HHTCCCEEEEC
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc---chhhcccchH--HHHHHHHHHHh--------------ccchhhhhhhc
Confidence            57899999999999999999999999986   7888888643  12222122111              02344567898


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccc
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASL  115 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~  115 (152)
                      ++..      ++.+.++++|++||+||..
T Consensus        81 ~~~~------~~~~~~~~iDilin~Ag~g  103 (191)
T d1luaa1          81 ADDA------SRAEAVKGAHFVFTAGAIG  103 (191)
T ss_dssp             CSHH------HHHHHTTTCSEEEECCCTT
T ss_pred             ccHH------HHHHHhcCcCeeeecCccc
Confidence            8854      7889999999999999853

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.38  E-value=1.1e-12  Score=92.10  Aligned_cols=109  Identities=17%  Similarity=0.292  Sum_probs=76.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .++|+||||+|++|++++++|++.|+   .|++++|........+....+...            ....+.++.+|+.+.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~---~V~~l~R~~~~~~~~~~~~~~~~~------------~~~~~~~~~~d~~~~   67 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH---PTFLLVRESTASSNSEKAQLLESF------------KASGANIVHGSIDDH   67 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC---CEEEECCCCCTTTTHHHHHHHHHH------------HTTTCEEECCCTTCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEECCCccccchhHHHHHHhh------------ccCCcEEEEeecccc
Confidence            57899999999999999999999997   678899976654333332222110            125678889999885


Q ss_pred             CCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                      .      .+...+.+.+.++|+++....            .++.++++++... +.+++++.|
T Consensus        68 ~------~~~~~~~~~~~vi~~~~~~~~------------~~~~~~~~a~~~~-~~~~~~~~s  111 (307)
T d1qyca_          68 A------SLVEAVKNVDVVISTVGSLQI------------ESQVNIIKAIKEV-GTVKRFFPS  111 (307)
T ss_dssp             H------HHHHHHHTCSEEEECCCGGGS------------GGGHHHHHHHHHH-CCCSEEECS
T ss_pred             h------hhhhhhhhceeeeeccccccc------------chhhHHHHHHHHh-ccccceeee
Confidence            4      577888899999999875432            2334566677666 455666554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.37  E-value=2.7e-12  Score=92.79  Aligned_cols=107  Identities=18%  Similarity=0.206  Sum_probs=76.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +.|+|+||||||++|++++++|++.|+   .|++++|+.+..  .  ...+..              ..+++++.+|+.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~--~--~~~~~~--------------~~~v~~~~gD~~d   60 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH---HVRAQVHSLKGL--I--AEELQA--------------IPNVTLFQGPLLN   60 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC---CEEEEESCSCSH--H--HHHHHT--------------STTEEEEESCCTT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC---eEEEEECCcchh--h--hhhhcc--------------cCCCEEEEeeCCC
Confidence            458999999999999999999999998   568888976522  1  111111              2678999999988


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                      +.     +-+..++.+++.+++......         ..++..+.++++++... +++++++.
T Consensus        61 ~~-----~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~  108 (350)
T d1xgka_          61 NV-----PLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIY  108 (350)
T ss_dssp             CH-----HHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEE
T ss_pred             cH-----HHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEE
Confidence            53     236778889999887654321         23456677889999887 55555544

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.35  E-value=1.5e-12  Score=90.98  Aligned_cols=87  Identities=22%  Similarity=0.227  Sum_probs=68.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+||||+|+||++++++|.++|+   .|+.++|++                                    +|+.+..
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~---~Vi~~~r~~------------------------------------~D~~d~~   42 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNV---EVIPTDVQD------------------------------------LDITNVL   42 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSE---EEEEECTTT------------------------------------CCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC---EEEEeechh------------------------------------ccCCCHH
Confidence            5799999999999999999999987   677777631                                    3676643


Q ss_pred             CCCChhHHHHHhc--cccEEEeccccccc---hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQE--EVSVVFNGAASLKL---EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~--~~d~vi~~a~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                            ++.+.++  ++|+|||+|+....   ..........|+.....+.+.+...
T Consensus        43 ------~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~   93 (281)
T d1vl0a_          43 ------AVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV   93 (281)
T ss_dssp             ------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccc
Confidence                  5677766  67999999987653   3444557788888888888888775

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.23  E-value=3e-11  Score=84.59  Aligned_cols=91  Identities=9%  Similarity=0.064  Sum_probs=61.5

Q ss_pred             ccCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++|+++||||+|  +||.+++++|+++|+   +|++.+|++.   +.+.+.++...             .....++.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga---~V~i~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~   62 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGA---TLAFTYLNES---LEKRVRPIAQE-------------LNSPYVYEL   62 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTC---EEEEEESSTT---THHHHHHHHHH-------------TTCCCEEEC
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH---HHHHHHHHHhh-------------CCceeEeee
Confidence            47899999999876  899999999999996   7788888643   34444443221             245567788


Q ss_pred             ccCCCCCCCC-hhHHHHHhccccEEEecccccc
Q psy11862         85 DILQANLGIK-DSDLLMLQEEVSVVFNGAASLK  116 (152)
Q Consensus        85 D~~~~~~~~~-~~~~~~~~~~~d~vi~~a~~~~  116 (152)
                      |++++....+ .+++.+.+.++|++||++|...
T Consensus        63 d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~   95 (274)
T d2pd4a1          63 DVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAP   95 (274)
T ss_dssp             CTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCC
T ss_pred             cccchhhHHHHHHHHHHHcCCCCeEEeeccccc
Confidence            9887541000 1112233347899999998653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.21  E-value=5.1e-11  Score=82.65  Aligned_cols=111  Identities=13%  Similarity=0.167  Sum_probs=76.2

Q ss_pred             ccCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+++|+++||||+|  +||+++++.|+++|+   +|++..|++.   ..+.+++....             ......+..
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~---~V~i~~~~~~---~~~~~~~~~~~-------------~~~~~~~~~   62 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQNDK---LKGRVEEFAAQ-------------LGSDIVLQC   62 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSTT---THHHHHHHHHH-------------TTCCCEEEC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCC---EEEEEeCCHH---HHHHHHHHHhh-------------cCCcceeec
Confidence            47899999999998  899999999999996   6777787643   33333333221             134556677


Q ss_pred             ccCCCCCCCChhHHHHHh-------ccccEEEeccccccc------------hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         85 DILQANLGIKDSDLLMLQ-------EEVSVVFNGAASLKL------------EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a~~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      |+.+..      +....+       ...|+++|+++....            .+.+...+.+|+.+...+.+.+...
T Consensus        63 ~~~~~~------~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (258)
T d1qsga_          63 DVAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM  133 (258)
T ss_dssp             CTTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchHH------HHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            776643      233222       367999999976531            2335557788888888888887654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.21  E-value=3.6e-11  Score=83.83  Aligned_cols=116  Identities=9%  Similarity=0.085  Sum_probs=73.8

Q ss_pred             ccCCceEEEcCC--cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGG--TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~--~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .|++|+++||||  +.+||.+++++|+++|+   +|++..|++.  ...+.+.+.               ...+...+.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga---~Vil~~~~~~--~~~~~~~~~---------------~~~~~~~~~~   62 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA---QLVLTGFDRL--RLIQRITDR---------------LPAKAPLLEL   62 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC---EEEEEECSCH--HHHHHHHTT---------------SSSCCCEEEC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC---EEEEEeCChH--HHHHHHHHH---------------cCCceeeEee
Confidence            478999999995  45799999999999996   6777777532  122222211               1356678899


Q ss_pred             ccCCCCCCCC-hhHHHHHh---ccccEEEeccccccc------------hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         85 DILQANLGIK-DSDLLMLQ---EEVSVVFNGAASLKL------------EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        85 D~~~~~~~~~-~~~~~~~~---~~~d~vi~~a~~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      |+++++...+ .+.+.+.+   ..+|+++|++|....            ...+...+.+|+.......+.....
T Consensus        63 dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (268)
T d2h7ma1          63 DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI  136 (268)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ecccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh
Confidence            9988541000 11222222   257999999986431            2344446677777777777666553

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.14  E-value=1.9e-10  Score=78.71  Aligned_cols=107  Identities=23%  Similarity=0.239  Sum_probs=73.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +|+++||||+++||+++++.|+++|+   +|++.+|++..                           .+.....+|+++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga---~V~i~~~~~~~---------------------------~~~~~~~~d~~~~   50 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY---RVVVLDLRREG---------------------------EDLIYVEGDVTRE   50 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSCCS---------------------------SSSEEEECCTTCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCccc---------------------------ccceEeeccccch
Confidence            48999999999999999999999996   77888886541                           3455677888764


Q ss_pred             CCCCChhHHHHHh------ccccEEEecccccc-----------chhhHHHHHHhhhHHHHHHHHHHHhc---------C
Q psy11862         90 NLGIKDSDLLMLQ------EEVSVVFNGAASLK-----------LEAELKENVAANTRGTQRLLDIALKM---------K  143 (152)
Q Consensus        90 ~~~~~~~~~~~~~------~~~d~vi~~a~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~---------~  143 (152)
                      .      ......      ...+.++++++...           ....++..+++|+.+...+.+.+...         +
T Consensus        51 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~  124 (241)
T d1uaya_          51 E------DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEG  124 (241)
T ss_dssp             H------HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTS
T ss_pred             h------hhHHHHHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhccc
Confidence            3      222222      13345555544321           14567778999999998888776432         1


Q ss_pred             CCcceEecC
Q psy11862        144 KLVVSLDIG  152 (152)
Q Consensus       144 ~~~~~v~~S  152 (152)
                      +..++|++|
T Consensus       125 ~~G~Ii~is  133 (241)
T d1uaya_         125 QRGVIVNTA  133 (241)
T ss_dssp             CSEEEEEEC
T ss_pred             Cceeeeeec
Confidence            235778765

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.12  E-value=3.5e-10  Score=79.77  Aligned_cols=129  Identities=9%  Similarity=-0.012  Sum_probs=72.6

Q ss_pred             cCCceEEEcCCcc--hhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          8 YAGRSVLVTGGTG--FMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         8 ~~~~~ilItG~~G--~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      +++|+++||||+|  +||++++++|+++|.   +|++..|++..............  ....+... ......-....+|
T Consensus         6 L~gK~alVTGass~~GIG~aiA~~la~~Ga---~Vvi~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~   79 (297)
T d1d7oa_           6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA---EILVGTWVPALNIFETSLRRGKF--DQSRVLPD-GSLMEIKKVYPLD   79 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEEEHHHHHHHHHHHHTTTT--TGGGBCTT-SSBCCEEEEEEEC
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCC---EEEEEeCchhhhhhHHHHHHhhh--hhhhhhhh-hhhhhhhhhhhhh
Confidence            7899999999876  999999999999996   67777764321100001000000  00000000 0001111222222


Q ss_pred             --cCC------------------CCCCC-ChhHHHHHhccccEEEecccccc---------chhhHHHHHHhhhHHHHHH
Q psy11862         86 --ILQ------------------ANLGI-KDSDLLMLQEEVSVVFNGAASLK---------LEAELKENVAANTRGTQRL  135 (152)
Q Consensus        86 --~~~------------------~~~~~-~~~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l  135 (152)
                        +.+                  ....- ..+.+.+.+.++|++|||||...         ..+.|...+++|+.+++.+
T Consensus        80 ~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~  159 (297)
T d1d7oa_          80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             hhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhh
Confidence              211                  11000 01123334458999999998632         1456888999999999999


Q ss_pred             HHHHHhc
Q psy11862        136 LDIALKM  142 (152)
Q Consensus       136 ~~~~~~~  142 (152)
                      .+++...
T Consensus       160 ~~~~~~~  166 (297)
T d1d7oa_         160 LSHFLPI  166 (297)
T ss_dssp             HHHHGGG
T ss_pred             hhHHHHH
Confidence            9988754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.12  E-value=3.5e-10  Score=79.24  Aligned_cols=116  Identities=16%  Similarity=0.119  Sum_probs=69.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      +..++||||+++||+++++.|++.|+   +|++..|+..  +..+.+.+...        .   ........+.+|..+.
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga---~V~i~~~~~~--~~~~~~~~~l~--------~---~~~~~~~~~~~d~~~~   65 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSA--AEANALSATLN--------A---RRPNSAITVQADLSNV   65 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHHH--------H---HSTTCEEEEECCCSSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCCH--HHHHHHHHHHH--------h---hcCCceEEEEeecccc
Confidence            46899999999999999999999996   6666665432  11222221111        0   0123344444443221


Q ss_pred             CC----------CCC-hhHHHHH-------hccccEEEeccccccc---------------------hhhHHHHHHhhhH
Q psy11862         90 NL----------GIK-DSDLLML-------QEEVSVVFNGAASLKL---------------------EAELKENVAANTR  130 (152)
Q Consensus        90 ~~----------~~~-~~~~~~~-------~~~~d~vi~~a~~~~~---------------------~~~~~~~~~~n~~  130 (152)
                      ..          .+. ++++.++       +.++|++|||||....                     ...+..++.+|+.
T Consensus        66 ~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~  145 (284)
T d1e7wa_          66 ATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAI  145 (284)
T ss_dssp             CBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTH
T ss_pred             cccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhhee
Confidence            10          011 2244443       3478999999997531                     1123346888999


Q ss_pred             HHHHHHHHHHh
Q psy11862        131 GTQRLLDIALK  141 (152)
Q Consensus       131 ~~~~l~~~~~~  141 (152)
                      +++.+.+.+.+
T Consensus       146 ~~~~~~~~~~~  156 (284)
T d1e7wa_         146 APYFLIKAFAH  156 (284)
T ss_dssp             HHHHHHHHHHH
T ss_pred             eeeeeeccccc
Confidence            99998887653

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.06  E-value=7.3e-10  Score=79.51  Aligned_cols=137  Identities=9%  Similarity=0.040  Sum_probs=77.4

Q ss_pred             CCceEEEcC--CcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          9 AGRSVLVTG--GTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         9 ~~~~ilItG--~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ++|.+||||  ++++||++++++|+++|.   +|++..+....   ...........+..+................+|+
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA---~V~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNV---KIIFGIWPPVY---NIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDA   74 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEECGGGH---HHHHHHHHTTTTTGGGEETTTEECCEEEEEECCT
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCC---EEEEEeCchhh---hhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccc
Confidence            478999999  557999999999999996   66766654321   1111111111111111111111112223334433


Q ss_pred             --------------------CCCCCC-CChhHHHHHhccccEEEecccccc---------chhhHHHHHHhhhHHHHHHH
Q psy11862         87 --------------------LQANLG-IKDSDLLMLQEEVSVVFNGAASLK---------LEAELKENVAANTRGTQRLL  136 (152)
Q Consensus        87 --------------------~~~~~~-~~~~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~n~~~~~~l~  136 (152)
                                          .+.... ...+.+.+.+.++|++||++|...         ..++|...+++|+.++..+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  154 (329)
T d1uh5a_          75 SFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLC  154 (329)
T ss_dssp             TCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             eehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHH
Confidence                                232210 001123344568999999998543         14678889999999999999


Q ss_pred             HHHHhc-CCCcceEec
Q psy11862        137 DIALKM-KKLVVSLDI  151 (152)
Q Consensus       137 ~~~~~~-~~~~~~v~~  151 (152)
                      +++.+. ..-.++|.+
T Consensus       155 k~~~~~m~~~GsIv~i  170 (329)
T d1uh5a_         155 KYFVNIMKPQSSIISL  170 (329)
T ss_dssp             HHHGGGEEEEEEEEEE
T ss_pred             HHHHhhcccccccccc
Confidence            988764 222456554

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.05  E-value=7.5e-10  Score=76.45  Aligned_cols=93  Identities=14%  Similarity=0.065  Sum_probs=66.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      ||+++||||+++||++++++|++.|+   +|++.+|+...                                ...|+.+.
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga---~V~~~~~~~~~--------------------------------~~~d~~~~   45 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGH---QIVGIDIRDAE--------------------------------VIADLSTA   45 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSS--------------------------------EECCTTSH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECChHH--------------------------------HHHHhcCH
Confidence            68999999999999999999999996   67888875431                                12344432


Q ss_pred             CCCCChh-HHH----HHhccccEEEeccccccchhhHHHHHHhhhHHHHHHHHHHH
Q psy11862         90 NLGIKDS-DLL----MLQEEVSVVFNGAASLKLEAELKENVAANTRGTQRLLDIAL  140 (152)
Q Consensus        90 ~~~~~~~-~~~----~~~~~~d~vi~~a~~~~~~~~~~~~~~~n~~~~~~l~~~~~  140 (152)
                      ..   .. ...    +..+.+|+++++||.......+.....+|..+...+.+...
T Consensus        46 ~~---~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (257)
T d1fjha_          46 EG---RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFL   98 (257)
T ss_dssp             HH---HHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHH
T ss_pred             HH---HHHHHHHHHHHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            20   00 011    11135899999999877777788888889888887776654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.03  E-value=1.3e-10  Score=81.55  Aligned_cols=106  Identities=21%  Similarity=0.302  Sum_probs=65.2

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANLG   92 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   92 (152)
                      ||||||+||||++++++|++.|+.  .|+++++-..+.... .+.+.                 .     ..|..+..  
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~--~V~~~d~~~~~~~~~-~~~~~-----------------~-----~~~~~~~~--   54 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKFV-NLVDL-----------------N-----IADYMDKE--   54 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCC--CEEEEECCSSGGGGH-HHHTS-----------------C-----CSEEEEHH--
T ss_pred             EEEecCccHHHHHHHHHHHhCCCC--eEEEEECCCCcchhh-ccccc-----------------c-----hhhhccch--
Confidence            799999999999999999999862  456665322211110 11100                 1     11211110  


Q ss_pred             CChhHHHH-----HhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceE
Q psy11862         93 IKDSDLLM-----LQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSL  149 (152)
Q Consensus        93 ~~~~~~~~-----~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v  149 (152)
                         +....     .+..+++++|+|+.... ..+.....+.++.++.++++++... +++.++
T Consensus        55 ---~~~~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~~v~  113 (307)
T d1eq2a_          55 ---DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIPFLY  113 (307)
T ss_dssp             ---HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCCEEE
T ss_pred             ---HHHHHHhhhhcccchhhhhhhcccccccccccccccccccccccccccccccc-cccccc
Confidence               01111     12367899999986553 4455667888899999999999886 565443

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.98  E-value=5.1e-09  Score=72.44  Aligned_cols=112  Identities=18%  Similarity=0.203  Sum_probs=69.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHH-HHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLA-EFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      .+++||||+++||++++++|+++|+   +|++.+|+..  ...+.+. ++..            ...........|..+.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~---~Vvi~~r~~~--~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~   64 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGF---RVVVHYRHSE--GAAQRLVAELNA------------ARAGSAVLCKGDLSLS   64 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHHHHH------------HSTTCEEEEECCCSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCch--HHHHHHHHHHHh------------hcCCceEEEecccccc
Confidence            4789999999999999999999996   7888888643  2222222 1111            1124666666666553


Q ss_pred             CCCCChhHHH-------HHhccccEEEeccccccc------------------hhhHHHHHHhhhHHHHHHHHHHHh
Q psy11862         90 NLGIKDSDLL-------MLQEEVSVVFNGAASLKL------------------EAELKENVAANTRGTQRLLDIALK  141 (152)
Q Consensus        90 ~~~~~~~~~~-------~~~~~~d~vi~~a~~~~~------------------~~~~~~~~~~n~~~~~~l~~~~~~  141 (152)
                      ..  .++.+.       +.+.++|++|||||....                  ...+..++..|+.+..........
T Consensus        65 ~~--~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (266)
T d1mxha_          65 SS--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFAR  139 (266)
T ss_dssp             TT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             hh--HHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcc
Confidence            31  122222       233479999999996531                  122334566677766666655543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.38  E-value=1.1e-05  Score=50.73  Aligned_cols=121  Identities=13%  Similarity=0.074  Sum_probs=74.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |++.|+|++|.+|..++..|+.++ -+..+.++++++..    +..+..     -.++................--.+  
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~-l~~el~L~D~~~~~----~~~~g~-----a~Dl~~~~~~~~~~~~~~~~~~~d--   68 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEP-FMKDLVLIGREHSI----NKLEGL-----REDIYDALAGTRSDANIYVESDEN--   68 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCT-TCCEEEEEECGGGH----HHHHHH-----HHHHHHHHTTSCCCCEEEEEETTC--
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC-cccccccccchhhh----Hhhhcc-----cccchhcccccccCCccccCCcch--
Confidence            579999999999999999998875 34588888875321    111100     001111111112222222111011  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEecC
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDIG  152 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  152 (152)
                              .+.++++|+||-+||.... .++..+.++.|..-...+++...+. +.+.++.+|
T Consensus        69 --------~~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~iivVt  122 (145)
T d1hyea1          69 --------LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-CDTKIFVIT  122 (145)
T ss_dssp             --------GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CCCEEEECS
T ss_pred             --------HHHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc-CCCeEEEEc
Confidence                    1244689999999997543 4566778999999999999998886 344555443

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.23  E-value=1.4e-05  Score=50.07  Aligned_cols=114  Identities=18%  Similarity=0.079  Sum_probs=73.4

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQANL   91 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   91 (152)
                      ++.|+||+|.+|++++..|..++ -+..+++++..+.   ..+. .++. +          ........   .-+..   
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~-~~~elvLiDi~~~---~~~a-~Dl~-~----------~~~~~~~~---~~~~~---   59 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSP-LVSRLTLYDIAHT---PGVA-ADLS-H----------IETRATVK---GYLGP---   59 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCT-TCSEEEEEESSSH---HHHH-HHHT-T----------SSSSCEEE---EEESG---
T ss_pred             eEEEECCCChHHHHHHHHHHhCC-ccceEEEEecccc---chhh-HHHh-h----------hhhhcCCC---eEEcC---
Confidence            78999999999999999998875 3568888886421   1111 1111 0          00111111   11211   


Q ss_pred             CCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         92 GIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        92 ~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                          .+....++++|+||.++|.... .++..++++.|+.....+++...+...-..++.+
T Consensus        60 ----~~~~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv  116 (144)
T d1mlda1          60 ----EQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII  116 (144)
T ss_dssp             ----GGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             ----CChHHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence                1466777899999999996543 3555668899999999999999887322344443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.21  E-value=1e-05  Score=50.84  Aligned_cols=116  Identities=15%  Similarity=0.058  Sum_probs=70.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |++.|+|++|.+|++++..|..+..-+..+.+++..+.   ..-..-++         .+.  ........+    ....
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~---~~g~a~Dl---------~h~--~~~~~~~~~----~~~~   62 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV---TPGVAVDL---------SHI--PTAVKIKGF----SGED   62 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT---HHHHHHHH---------HTS--CSSCEEEEE----CSSC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc---chhHHHHH---------HCC--ccccCCcEE----EcCC
Confidence            58899999999999999888655223457888876422   11111111         110  011222222    1111


Q ss_pred             CCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                            +. ..+++.|+||.++|... ..++..+++..|..-...+.+...+...-..++.+
T Consensus        63 ------~~-~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivv  117 (145)
T d2cmda1          63 ------AT-PALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII  117 (145)
T ss_dssp             ------CH-HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             ------Cc-cccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEc
Confidence                  13 35678999999999754 34556668899999999999998886322334444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.07  E-value=3.2e-05  Score=50.03  Aligned_cols=120  Identities=18%  Similarity=0.070  Sum_probs=72.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhh---CCC-CcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRS---CPD-IGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~---g~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      -.+|.||||+|.+|++++..|++.   |.. ...+++++..+.    .+.+..+.-     ++.. .  ..+....+.  
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~----~~~l~g~~m-----dl~d-~--a~~~~~~~~--   89 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERS----FQALEGVAM-----ELED-S--LYPLLREVS--   89 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG----HHHHHHHHH-----HHHT-T--TCTTEEEEE--
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccc----cchhcchhh-----hhcc-c--ccccccCcc--
Confidence            347999999999999999999874   222 124455554322    111111100     0000 0  012222111  


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhcCC-CcceEec
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKMKK-LVVSLDI  151 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~  151 (152)
                      .++        +..+.++++|+||-.+|... ..++..+++..|..-...+.++..+... -.+++.+
T Consensus        90 ~~~--------~~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv  149 (175)
T d7mdha1          90 IGI--------DPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVV  149 (175)
T ss_dssp             EES--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred             ccc--------cchhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEe
Confidence            111        25667789999999998764 4677788999999999999999988522 2344444

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.87  E-value=0.00039  Score=43.47  Aligned_cols=118  Identities=14%  Similarity=0.096  Sum_probs=72.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      ..+++|.|+|+ |.+|..++..|+..+. +.+++++++.+..  +.-...         ++............+...|..
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l-~~el~L~Di~~~~--~~g~a~---------Dl~~~~~~~~~~~~~~~~d~~   70 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESK--AIGDAM---------DFNHGKVFAPKPVDIWHGDYD   70 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH--HHHHHH---------HHHHHTTSSSSCCEEEECCGG
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEeecccc--ccchhc---------cHhhCccccCCCeEEEECCHH
Confidence            34678999996 9999999999999864 4688888875321  111111         111111111233333344431


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                                   .++++|+|+.++|.... .+...+.+..|..-...+++...+...-..++.+
T Consensus        71 -------------~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivv  122 (148)
T d1ldna1          71 -------------DCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (148)
T ss_dssp             -------------GTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             -------------HhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Confidence                         24679999999987543 3444557788888888888888776322344444

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.87  E-value=2.7e-05  Score=47.84  Aligned_cols=71  Identities=17%  Similarity=0.156  Sum_probs=49.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|+|+|+ |.+|+.+++.|.+.|+   .|++++++      .+++..+...              .+..++.+|.++++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~---~v~vid~d------~~~~~~~~~~--------------~~~~vi~Gd~~~~~   56 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGH---DIVLIDID------KDICKKASAE--------------IDALVINGDCTKIK   56 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESC------HHHHHHHHHH--------------CSSEEEESCTTSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC---CcceecCC------hhhhhhhhhh--------------hhhhhccCcccchh
Confidence            68999996 9999999999999987   56777754      2333332110              24678889999865


Q ss_pred             CCCChhHHHHH-hccccEEEec
Q psy11862         91 LGIKDSDLLML-QEEVSVVFNG  111 (152)
Q Consensus        91 ~~~~~~~~~~~-~~~~d~vi~~  111 (152)
                            -+.++ ++.+|.++-+
T Consensus        57 ------~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_          57 ------TLEDAGIEDADMYIAV   72 (132)
T ss_dssp             ------HHHHTTTTTCSEEEEC
T ss_pred             ------hhhhcChhhhhhhccc
Confidence                  35554 4578888864

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.87  E-value=0.00013  Score=45.57  Aligned_cols=107  Identities=13%  Similarity=0.067  Sum_probs=64.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +.++|.|.|+ |.+|..++..|+..|. +..++++++.+.      +....     -.++....... .......+|.. 
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~-~~elvL~D~~~~------~~~g~-----a~Dl~~a~~~~-~~~~~~~~d~~-   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKD------RTKGD-----ALDLEDAQAFT-APKKIYSGEYS-   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH------HHHHH-----HHHHHGGGGGS-CCCEEEECCGG-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEeecccc------hhHHH-----HHHHhcccccc-CCceEeeccHH-
Confidence            4568999995 9999999999999863 458999987532      11100     01111111111 22334444432 


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                  ..+++|+|+.++|.... ..+..+....|+.-...+.+...+.
T Consensus        69 ------------~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~  111 (146)
T d1ez4a1          69 ------------DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS  111 (146)
T ss_dssp             ------------GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT
T ss_pred             ------------HhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence                        23689999999986543 3445557788998888988888876

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.87  E-value=0.00014  Score=45.24  Aligned_cols=108  Identities=12%  Similarity=-0.009  Sum_probs=69.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      .++.|+|++|.+|..++..+..++. +..+++++.........-...         ++.+.... ........+|..   
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l-~~el~L~Di~~~~~~~~g~a~---------Dl~~~~~~-~~~~~i~~~~~~---   66 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKEDDTVGQAA---------DTNHGIAY-DSNTRVRQGGYE---   66 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGHHHHHHHHH---------HHHHHHTT-TCCCEEEECCGG---
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCC-CCEEEEEecCCcccccceeec---------chhhcccc-cCCceEeeCCHH---
Confidence            3789999999999999999988854 457888875322101110011         11111111 123333334332   


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                ...++|+|+-+||.... .++..+.++.|..-...+.+...+.
T Consensus        67 ----------~~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~  109 (142)
T d1o6za1          67 ----------DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH  109 (142)
T ss_dssp             ----------GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ----------HhhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc
Confidence                      13689999999996553 3566778999999999999999887

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.83  E-value=0.00017  Score=45.46  Aligned_cols=110  Identities=16%  Similarity=0.105  Sum_probs=65.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCC---CCc-EEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCP---DIG-KVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~---~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ++|.|+||+|.+|++++..|...+.   ... .+.++.-...    .+.+.....     ++.   .........+... 
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~----~~~~~~~~~-----~~~---~~~~~~~~~~~~~-   71 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA----MKALEGVVM-----ELE---DCAFPLLAGLEAT-   71 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG----HHHHHHHHH-----HHH---TTTCTTEEEEEEE-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccc----hhhHcCchh-----hhh---ccccccccccccC-
Confidence            4899999999999999999987532   100 1222221111    111111100     000   0011222222221 


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                       +        +....++++|+||-++|.... ..+..+.+..|+.-...+.+...+.
T Consensus        72 -~--------~~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~  119 (154)
T d1y7ta1          72 -D--------DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV  119 (154)
T ss_dssp             -S--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -C--------chhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence             1        245677899999999997653 4566778899999999999998875

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.76  E-value=0.00099  Score=41.16  Aligned_cols=107  Identities=13%  Similarity=0.124  Sum_probs=66.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |++.|+|+ |.+|+.++..|+..+. +..+.+++.++..  +.-....+....         ........+...+  +  
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l-~~el~L~Di~~~~--~~~~~~d~~~~~---------~~~~~~~~i~~~~--~--   63 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGI--PQGKALDMYESG---------PVGLFDTKVTGSN--D--   63 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSH--HHHHHHHHHTTH---------HHHTCCCEEEEES--C--
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC-CceEEEecccccc--chhhhhhhhccc---------chhcccceEEecC--C--
Confidence            57888896 9999999999988863 4588999876541  111111111110         0001222222111  1  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                              .+.++++|+++-++|.... ..+-.+....|..-...+++...+.
T Consensus        64 --------~~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~  108 (142)
T d1guza1          64 --------YADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH  108 (142)
T ss_dssp             --------GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------HHHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc
Confidence                    1234789999999997543 3555668888999899988888876

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.75  E-value=4.3e-05  Score=49.43  Aligned_cols=42  Identities=24%  Similarity=0.329  Sum_probs=31.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP   52 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~   52 (152)
                      |++|.|.||||++|.++++.|.++ +++..+.+.+++..+...
T Consensus         1 MikVaIvGATGyvG~eLirlL~~H-P~~ei~~l~s~~~aG~~i   42 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTYAGKKL   42 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTTTTSBH
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhC-CCceEEEeeccccCCCcc
Confidence            578999999999999999988877 566444555555444433

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.74  E-value=0.00034  Score=44.02  Aligned_cols=109  Identities=11%  Similarity=0.049  Sum_probs=66.8

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQ   88 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   88 (152)
                      +.++|.|.|+ |.+|..++..|...+.  ..+++++.++.  .+.-...++         ...............   ++
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~--~el~L~D~~~~--~~~g~a~Dl---------~~~~~~~~~~~~~~~---~~   68 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKG--MPEGKALDL---------SHVTSVVDTNVSVRA---EY   68 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSS--HHHHHHHHH---------HHHHHHTTCCCCEEE---EC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCC--ceEEEEEeccc--cchhHHHHH---------hhhccccCCeeEEec---cC
Confidence            4578999997 9999999988888764  57888886543  111111111         110000001111110   11


Q ss_pred             CCCCCChhHHHHHhccccEEEeccccccch------hhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         89 ANLGIKDSDLLMLQEEVSVVFNGAASLKLE------AELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        89 ~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~------~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                              +.+...++.|+|+-++|....+      .+..+.+..|..-...+++...+.
T Consensus        69 --------~~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~  120 (154)
T d1pzga1          69 --------SYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY  120 (154)
T ss_dssp             --------SHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             --------chhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc
Confidence                    2556678999999999865432      244457788999999998888876

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.70  E-value=0.00039  Score=44.05  Aligned_cols=34  Identities=38%  Similarity=0.574  Sum_probs=29.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .|+|+|.|+ |.+|.++++.|.+.|+   .|++..|+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~---~V~v~dr~~   35 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGI---KVTVACRTL   35 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTC---EEEEEESCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEECCh
Confidence            689999986 9999999999999987   678888853

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.69  E-value=0.00038  Score=44.08  Aligned_cols=119  Identities=11%  Similarity=0.053  Sum_probs=72.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ....+++.|.|+ |.+|..++..|..+| -+.+++++++.+..  +.-...         ++.+.............+|.
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~-l~~ElvLiD~~~~~--a~g~al---------Dl~h~~~~~~~~~~~~~~d~   83 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKS-LADELALVDVLEDK--LKGEMM---------DLQHGSLFLQTPKIVADKDY   83 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSCHHH--HHHHHH---------HHHHTGGGCCCSEEEECSSG
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcC-CCcEEEEEEeccch--hHHHHH---------HHhccccccCCCeEEeccch
Confidence            345679999995 999999999999986 45688888874321  111111         11111111112222222332


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                      .             ..+++|+|+..||.... .++..+.+..|..-...++....+...-.-++.+
T Consensus        84 ~-------------~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivv  136 (160)
T d1i0za1          84 S-------------VTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVV  136 (160)
T ss_dssp             G-------------GGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             h-------------hcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence            2             24688999999997643 3455567888999999998888886322234444

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.67  E-value=0.00087  Score=41.50  Aligned_cols=114  Identities=13%  Similarity=0.150  Sum_probs=67.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      ++|.|.|+ |.+|..++..++..+. +..++++++++....  -...+         +.+.... ........+|.    
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~D~~~~~~~--g~a~D---------l~~~~~~-~~~~~~~~~~~----   63 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAI--GEAMD---------INHGLPF-MGQMSLYAGDY----   63 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CC--HHHHH---------HTTSCCC-TTCEEEC--CG----
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeccCCccc--eeeee---------eccCccc-CCCeeEeeCcH----
Confidence            47888896 9999999999988863 568999997664221  11111         1111111 12222222221    


Q ss_pred             CCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhcCCCcceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKMKKLVVSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  151 (152)
                               +.++++|+|+-+||... ..++..+....|..-...+++...+...-..++.+
T Consensus        64 ---------~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivv  116 (142)
T d1y6ja1          64 ---------SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  116 (142)
T ss_dssp             ---------GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             ---------HHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEe
Confidence                     23468999999998654 24556668899999999999988886322234444

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=9.7e-05  Score=47.82  Aligned_cols=84  Identities=11%  Similarity=0.158  Sum_probs=53.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +++++++|.|+ |+.|++++..|.+.|.  ..+++..|+...  . +++..+..     ++..     .........++.
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~--~~i~i~nR~~~~--~-~~~~~l~~-----~~~~-----~~~~~~~~~~~~   79 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDEF--F-DKALAFAQ-----RVNE-----NTDCVVTVTDLA   79 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTT--H-HHHHHHHH-----HHHH-----HSSCEEEEEETT
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCC--ceEeeeccchHH--H-HHHHHHHH-----HHHh-----hcCcceEeeecc
Confidence            57789999996 7889999999999865  688898987542  2 22221110     0000     012223345665


Q ss_pred             CCCCCCChhHHHHHhccccEEEeccc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGAA  113 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a~  113 (152)
                      +.+      ++......+|+|||+..
T Consensus        80 ~~~------~~~~~~~~~diiIN~Tp   99 (182)
T d1vi2a1          80 DQQ------AFAEALASADILTNGTK   99 (182)
T ss_dssp             CHH------HHHHHHHTCSEEEECSS
T ss_pred             ccc------chhhhhcccceeccccC
Confidence            532      46666778899999864

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.65  E-value=2.8e-05  Score=50.20  Aligned_cols=34  Identities=29%  Similarity=0.361  Sum_probs=29.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |+|.|+||+|.+|+++++.|++.|+   +|.+.+|++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~---~V~l~~R~~   34 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGH---EIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC---EEEEEECCH
Confidence            5788889899999999999999997   677888864

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=5.7e-05  Score=50.68  Aligned_cols=79  Identities=11%  Similarity=0.098  Sum_probs=51.8

Q ss_pred             cCCceEEEcCC----------------cchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh
Q psy11862          8 YAGRSVLVTGG----------------TGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE   71 (152)
Q Consensus         8 ~~~~~ilItG~----------------~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (152)
                      ++|++||||+|                +|..|.+|++++..+|+   .|.++.......                     
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga---~V~li~g~~~~~---------------------   59 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA---NVTLVSGPVSLP---------------------   59 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC---EEEEEECSCCCC---------------------
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCC---chhhhhcccccC---------------------
Confidence            67899999987                57799999999999997   455554332211                     


Q ss_pred             ccccCCcEEEEEcccCCCCCCCChhHHHHHhccccEEEeccccccc
Q psy11862         72 CPAQLSRLHIIEGDILQANLGIKDSDLLMLQEEVSVVFNGAASLKL  117 (152)
Q Consensus        72 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~  117 (152)
                         .+..+..+...-.+..    ...+...++..|++|+.|+..++
T Consensus        60 ---~p~~~~~~~~~t~~~m----~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          60 ---TPPFVKRVDVMTALEM----EAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             ---CCTTEEEEECCSHHHH----HHHHHHHGGGCSEEEECCBCCSE
T ss_pred             ---cccccccceehhhHHH----HHHHHhhhccceeEeeeechhhh
Confidence               1234555544322211    12345556789999999998875

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.62  E-value=0.0011  Score=41.29  Aligned_cols=106  Identities=11%  Similarity=0.094  Sum_probs=63.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+|.|+| .|.+|..++..|+.+| -+..++++++++.      +....     ..++................|..   
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~-~~~elvL~Di~~~------~~~g~-----~~Dl~~a~~~~~~~~~~~~~d~~---   65 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQG-VADDYVFIDANEA------KVKAD-----QIDFQDAMANLEAHGNIVINDWA---   65 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHT-CCSEEEEECSSHH------HHHHH-----HHHHHHHGGGSSSCCEEEESCGG---
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcC-CCceEEEEecccc------hhhhH-----HHhhhccccccCCccceeccCHH---
Confidence            6888999 5999999999999886 3457888876432      11110     01122111111223333333332   


Q ss_pred             CCCChhHHHHHhccccEEEeccccccch-----hhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLE-----AELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                .++++|+||-+||.....     .+..+..+.|..-...+.+...+.
T Consensus        66 ----------~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~  112 (146)
T d1hyha1          66 ----------ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES  112 (146)
T ss_dssp             ----------GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred             ----------HhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc
Confidence                      236899999999965421     122235677888888888888776

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=1.6e-05  Score=49.95  Aligned_cols=39  Identities=18%  Similarity=0.272  Sum_probs=31.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAKR   48 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~~   48 (152)
                      |++|.|.||||++|+.+++.|+++ .+.+..++++.++..
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            468999999999999999988764 456678887776554

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.61  E-value=9.3e-05  Score=46.70  Aligned_cols=110  Identities=17%  Similarity=0.035  Sum_probs=64.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCC----CCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCP----DIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~----~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      ++|.|+||+|.+|++++..|+..+.    ....++.++..+.    .+....+..     ++..  . .......+  ..
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~----~~~~~~l~~-----~~~~--~-~~~~~~~~--~~   69 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM----MGVLDGVLM-----ELQD--C-ALPLLKDV--IA   69 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG----HHHHHHHHH-----HHHH--T-CCTTEEEE--EE
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccc----hhhhhhhhh-----hhcc--c-cccccccc--cc
Confidence            5899999999999999999876421    1224455543322    111111100     0000  0 01122222  11


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      .+        +....++++|+||-++|.... .++..+.+..|..-...+.....+.
T Consensus        70 ~~--------~~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          70 TD--------KEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             ES--------CHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             Cc--------ccccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence            22        245667899999999997653 3455567889999888888888764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.49  E-value=0.0014  Score=40.43  Aligned_cols=105  Identities=18%  Similarity=0.094  Sum_probs=66.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |++.|.|+ |.+|..++..++.++. +..++++++++.      +....     ..++....+. ........+|..   
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~Di~~~------~~~g~-----~~Dl~~~~~~-~~~~~~~~~~~~---   63 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKK------RAEGD-----ALDLIHGTPF-TRRANIYAGDYA---   63 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH------HHHHH-----HHHHHHHGGG-SCCCEEEECCGG---
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEecccc------cccch-----hccccccccc-cccccccCCcHH---
Confidence            57888896 8999999999988864 468888886532      11110     0111111111 123333333321   


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                .++++|+|+-++|.... .....+++..|..-...+++...+.
T Consensus        64 ----------~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~  106 (140)
T d1a5za1          64 ----------DLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY  106 (140)
T ss_dssp             ----------GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhc
Confidence                      24689999999987553 4455668888998888888888876

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.47  E-value=0.0013  Score=40.62  Aligned_cols=106  Identities=11%  Similarity=0.039  Sum_probs=66.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEE-cccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIE-GDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~   89 (152)
                      |++.|.|+ |.+|..++..++.+| -+..++++++++.      ....     .-.++++............. .|.   
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~------~~~g-----~alDl~~~~~~~~~~~~i~~~~d~---   64 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAED------LAVG-----EAMDLAHAAAGIDKYPKIVGGADY---   64 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHH------HHHH-----HHHHHHHHHHTTTCCCEEEEESCG---
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcC-cCceEEEEecccc------hhhH-----HHHHHhhhccccCCCCccccCCCH---
Confidence            57888896 999999999998885 5568888886432      1110     00111111111111122221 222   


Q ss_pred             CCCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                +.+++.|+|+-.+|... ...+..+....|..-...+.+...+.
T Consensus        65 ----------~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~  108 (142)
T d1ojua1          65 ----------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN  108 (142)
T ss_dssp             ----------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ----------HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh
Confidence                      24468899999998654 34456668888999999999888886

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.46  E-value=0.0023  Score=39.61  Aligned_cols=112  Identities=15%  Similarity=0.096  Sum_probs=69.3

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEE-EcccCCCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHII-EGDILQAN   90 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~   90 (152)
                      ++.|.|+ |.+|.+++..++.++. +..++++++++..  +.-...         ++....... ...... ..|.    
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l-~~ElvL~D~~~~~--~~g~a~---------Dl~~a~~~~-~~~~i~~~~~~----   64 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKER--VEAEVL---------DMQHGSSFY-PTVSIDGSDDP----   64 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHH--HHHHHH---------HHHHTGGGS-TTCEEEEESCG----
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEecccc--chhHHH---------HHHhccccC-CCceeecCCCH----
Confidence            6888896 9999999999988864 4688888865321  111111         111111111 112222 2222    


Q ss_pred             CCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhcCCCc-ceEec
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKMKKLV-VSLDI  151 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~  151 (152)
                              + ..+++|+||-+||.... .++..+.+..|..-...++....+. +.+ .++.+
T Consensus        65 --------~-~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~ivv  117 (143)
T d1llda1          65 --------E-ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLI  117 (143)
T ss_dssp             --------G-GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred             --------H-HhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhh-CCCeEEEEe
Confidence                    1 24678999999997653 4566678899999999998888876 333 34444

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.45  E-value=0.00042  Score=42.22  Aligned_cols=71  Identities=17%  Similarity=0.297  Sum_probs=48.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |+++|.| .|.+|+.+++.|.+.|+++   ++++.+      .+.++.+..               .....+.+|.++++
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~v---vvid~d------~~~~~~~~~---------------~~~~~~~gd~~~~~   55 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEV---LAVDIN------EEKVNAYAS---------------YATHAVIANATEEN   55 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCC---EEEESC------HHHHHHTTT---------------TCSEEEECCTTCTT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeE---EEecCc------HHHHHHHHH---------------hCCcceeeecccch
Confidence            4678887 4899999999999999854   555543      334444322               33456779998876


Q ss_pred             CCCChhHHHHH-hccccEEEecc
Q psy11862         91 LGIKDSDLLML-QEEVSVVFNGA  112 (152)
Q Consensus        91 ~~~~~~~~~~~-~~~~d~vi~~a  112 (152)
                            -+.++ ++.+|.+|-..
T Consensus        56 ------~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1          56 ------ELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             ------HHHHHTGGGCSEEEECC
T ss_pred             ------hhhccCCccccEEEEEc
Confidence                  35554 56888877544

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.42  E-value=7.1e-05  Score=46.77  Aligned_cols=36  Identities=28%  Similarity=0.333  Sum_probs=28.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ++|.|.||||++|.++++.|.++++....+..++.+
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            689999999999999999997665555677766544

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.41  E-value=0.00024  Score=44.98  Aligned_cols=38  Identities=29%  Similarity=0.393  Sum_probs=32.3

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ..+++++++|.|+ |.+|..+++.|...|.  ..+.+..|+
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~--~~i~v~nRt   57 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRT   57 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSS
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCC--cEEEEEcCc
Confidence            3478899999996 9999999999999875  578888875

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=0.00042  Score=43.86  Aligned_cols=110  Identities=9%  Similarity=0.027  Sum_probs=65.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .++..+|.|.|+ |.+|..++..|...|. +..++++++++.  .+.-...+         +................|.
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l-~~elvL~D~~~~--~a~g~alD---------l~~~~~~~~~~~~~~~~d~   82 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGL-ADELALVDADTD--KLRGEALD---------LQHGSLFLSTPKIVFGKDY   82 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTS-CSEEEEECSCHH--HHHHHHHH---------HHHTTTTCSCCEEEEESSG
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCch--hhhccHHH---------HhCcchhcCCCeEEeccch
Confidence            355568999995 9999999999998864 457888886432  11111111         1111111112222222332


Q ss_pred             CCCCCCCChhHHHHHhccccEEEeccccccc-hhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGAASLKL-EAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                      .             ..+++|+||-.||.... .++..+.++.|+.-...+.....+.
T Consensus        83 ~-------------~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~  126 (159)
T d2ldxa1          83 N-------------VSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN  126 (159)
T ss_dssp             G-------------GGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH
T ss_pred             h-------------hhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence            2             23678999999987543 2333446777888888877777665

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.34  E-value=0.0026  Score=39.20  Aligned_cols=105  Identities=12%  Similarity=0.205  Sum_probs=60.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEE-EcccCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHII-EGDILQA   89 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~   89 (152)
                      ++|.|.|+ |.+|..++..|+..+.  ..+++++..+.  .......++....         ........+. ..|..  
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l--~dl~l~D~~~~--~~~~~~~Dl~~~~---------~~~~~~~~i~~~~d~~--   65 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKEL--GDIVLLDIVEG--VPQGKALDLYEAS---------PIEGFDVRVTGTNNYA--   65 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSSSS--HHHHHHHHHHTTH---------HHHTCCCCEEEESCGG--
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCc--ceEEEEeeccc--cchhHHHHhhccc---------cccCCCCEEEecCcHH--
Confidence            57888895 9999999999888754  57888886543  1111111221110         0001111121 12221  


Q ss_pred             CCCCChhHHHHHhccccEEEecccccc-chhhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLK-LEAELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                                 ..++.|+||-+||... ...+..+.+..|+.-...++....+.
T Consensus        66 -----------~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~  108 (142)
T d1uxja1          66 -----------DTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL  108 (142)
T ss_dssp             -----------GGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGG
T ss_pred             -----------HhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc
Confidence                       2367899999999654 34455567788998888888888876

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.33  E-value=0.00011  Score=45.96  Aligned_cols=37  Identities=19%  Similarity=0.338  Sum_probs=28.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhh-CCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRS-CPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~-g~~~~~v~~~~r~~   47 (152)
                      |+|.|.||||+.|+++++.|+++ .+.+..+..++.+.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~   38 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ   38 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSC
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccc
Confidence            57999999999999999988764 34556777666543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.23  E-value=0.0014  Score=41.96  Aligned_cols=38  Identities=24%  Similarity=0.178  Sum_probs=31.1

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +..++.+++|+||+|++|...+.-....|.   +|+..+++
T Consensus        26 ~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga---~vi~~~~~   63 (182)
T d1v3va2          26 GVKGGETVLVSAAAGAVGSVVGQIAKLKGC---KVVGAAGS   63 (182)
T ss_dssp             CCCSSCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCCCEEEEEeCCCchhHHHHHHHHccCC---EEEEeCCC
Confidence            344688999999999999998887777774   78888865

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.0025  Score=40.41  Aligned_cols=36  Identities=28%  Similarity=0.219  Sum_probs=29.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+.+++|+|++|++|...++.....|.   ++++.+++
T Consensus        27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G~---~vi~~~~~   62 (174)
T d1yb5a2          27 KAGESVLVHGASGGVGLAACQIARAYGL---KILGTAGT   62 (174)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred             CCCCEEEEEeccccccccccccccccCc---cccccccc
Confidence            4678999999999999998888777774   67777754

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.08  E-value=0.0023  Score=40.63  Aligned_cols=38  Identities=11%  Similarity=-0.009  Sum_probs=31.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ...+.+++|+||+|++|...+......|.   +|+..++++
T Consensus        26 l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga---~Vi~~~~s~   63 (179)
T d1qora2          26 IKPDEQFLFHAAAGGVGLIACQWAKALGA---KLIGTVGTA   63 (179)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred             CCCCCEEEEEccccccchHHHHHHHHhCC---eEeecccch
Confidence            34578999999999999998888777774   788887753

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.06  E-value=0.0071  Score=37.58  Aligned_cols=106  Identities=15%  Similarity=0.153  Sum_probs=63.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      .|+.|.|+ |.+|..++..+...+  +..+.++++.+.  .+.-...++. +        ..........+...+  +  
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~--l~el~L~Di~~~--~~~g~a~Dl~-~--------~~~~~~~~~~v~~~~--~--   65 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKN--LGDVVLFDIVKN--MPHGKALDTS-H--------TNVMAYSNCKVSGSN--T--   65 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECSSSS--HHHHHHHHHH-T--------HHHHHTCCCCEEEEC--C--
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCC--CCeEEEEeccCC--cceeeecchh-h--------hccccCCCcEEEecc--c--
Confidence            58889995 999999998777664  578998887543  1111111111 1        000001222222221  1  


Q ss_pred             CCCChhHHHHHhccccEEEeccccccch------hhHHHHHHhhhHHHHHHHHHHHhc
Q psy11862         91 LGIKDSDLLMLQEEVSVVFNGAASLKLE------AELKENVAANTRGTQRLLDIALKM  142 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~------~~~~~~~~~n~~~~~~l~~~~~~~  142 (152)
                              .+.+++.|+|+-++|....+      .+..+.+..|..-...+.+..++.
T Consensus        66 --------~~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~  115 (150)
T d1t2da1          66 --------YDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN  115 (150)
T ss_dssp             --------GGGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             --------ccccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc
Confidence                    12336789999999965432      124456788999899998888876

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.04  E-value=0.0042  Score=39.49  Aligned_cols=36  Identities=19%  Similarity=0.276  Sum_probs=29.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -++.+++|+||+|++|...+..+...|.   ++++.+++
T Consensus        24 ~~g~~VlI~ga~g~vG~~~iqla~~~g~---~vi~~~~~   59 (183)
T d1pqwa_          24 SPGERVLIHSATGGVGMAAVSIAKMIGA---RIYTTAGS   59 (183)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTC---EEEEEESS
T ss_pred             CCCCEEEEECCCCCcccccchhhccccc---cceeeecc
Confidence            3578999999999999998888877774   66777754

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.00025  Score=39.31  Aligned_cols=37  Identities=19%  Similarity=0.233  Sum_probs=29.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      -++.+++|+||+|++|...+..+...|.   +|++.++++
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~---~Vi~~t~s~   66 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGY---QVVAVSGRE   66 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCG
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCC---eEEEEECCH
Confidence            3567999999999999998887777775   677777754

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.02  E-value=0.00049  Score=44.48  Aligned_cols=44  Identities=18%  Similarity=0.258  Sum_probs=31.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP   52 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~   52 (152)
                      .+..+|.|.||||+.|.++++.|.++ +.+....+.+++..+...
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~S~~~aG~~~   46 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMTADRKAGEQF   46 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECSTTTTSCH
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhC-CCceEEEEeccccCCCcc
Confidence            35568999999999999999999987 555444444554444443

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.97  E-value=0.00049  Score=44.30  Aligned_cols=35  Identities=20%  Similarity=0.380  Sum_probs=27.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      |++|.|.||||+.|.++++.|.++ +++....+..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~H-P~~ei~~l~~~   35 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRH-PHMTITALTVS   35 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhC-CCCceEeeEee
Confidence            579999999999999999999887 55533344444

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.93  E-value=0.0013  Score=41.79  Aligned_cols=38  Identities=18%  Similarity=0.198  Sum_probs=30.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .-.+.+++|+||+|.+|...+..+...|.   +|++.++++
T Consensus        25 ~~~g~~VlI~ga~G~vG~~aiqlak~~G~---~vi~~~~~~   62 (171)
T d1iz0a2          25 ARPGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAASRP   62 (171)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSG
T ss_pred             CCCCCEEEEEeccccchhhhhhhhccccc---ccccccccc
Confidence            34678999999999999998887777774   677777654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.78  E-value=0.0034  Score=40.34  Aligned_cols=88  Identities=20%  Similarity=0.151  Sum_probs=56.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCC--HHHHHHHHhcChhhhhhhhhccccCCcEEEEEc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLT--PKARLAEFSKLPVFERLRKECPAQLSRLHIIEG   84 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..+|++....  ..+.+.++.+              ..++.++.+
T Consensus        39 ~l~gk~vgIiG-~G~IG~~va~~l~~~g~---~v~~~d~~~~~~~~~~~~~l~ell~--------------~sDiv~~~~  100 (181)
T d1qp8a1          39 LIQGEKVAVLG-LGEIGTRVGKILAALGA---QVRGFSRTPKEGPWRFTNSLEEALR--------------EARAAVCAL  100 (181)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHHTTC---EEEEECSSCCCSSSCCBSCSHHHHT--------------TCSEEEECC
T ss_pred             cccCceEEEec-cccccccceeeeecccc---ccccccccccccceeeeechhhhhh--------------ccchhhccc
Confidence            37889999999 78899999999998874   7888888654321  1111222221              256777777


Q ss_pred             ccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         85 DILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        85 D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .+++...++-.++..+.+++--++||.+
T Consensus       101 pl~~~t~~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1         101 PLNKHTRGLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             ccccccccccccceeeeccccceEEecc
Confidence            7766554444444555555556667655

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.76  E-value=0.0039  Score=40.47  Aligned_cols=94  Identities=11%  Similarity=0.042  Sum_probs=56.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..++..... ... ........-++++-.     ..++..+.+.++
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~-~~~-~~~~~~~~~l~~ll~-----~sD~i~~~~plt  115 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAFGF---NVLFYDPYLSDG-VER-ALGLQRVSTLQDLLF-----HSDCVTLHCGLN  115 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECTTSCTT-HHH-HHTCEECSSHHHHHH-----HCSEEEECCCCC
T ss_pred             eeCceEEEec-cccccccceeeeecccc---ceeeccCccccc-chh-hhccccccchhhccc-----cCCEEEEeeccc
Confidence            6789999998 89999999999988874   778888764422 111 111111100111110     156777778877


Q ss_pred             CCCCCCChhHHHHHhccccEEEecc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      +...++-..+..+.+++--++||.+
T Consensus       116 ~~T~~li~~~~l~~mk~~a~lIN~s  140 (193)
T d1mx3a1         116 EHNHHLINDFTVKQMRQGAFLVNTA  140 (193)
T ss_dssp             TTCTTSBSHHHHTTSCTTEEEEECS
T ss_pred             ccchhhhhHHHHhccCCCCeEEecC
Confidence            7665555445555555556666665

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.69  E-value=0.00098  Score=41.44  Aligned_cols=38  Identities=24%  Similarity=0.292  Sum_probs=31.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .++++|.|.||.|.+|..+++.|.+.||   .|.+.+|+..
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~---~V~~~d~~~~   44 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGY---PISILDREDW   44 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTC---CEEEECTTCG
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCC---CcEecccccc
Confidence            3568999999999999999999999998   4567777543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.69  E-value=0.0026  Score=40.70  Aligned_cols=37  Identities=27%  Similarity=0.249  Sum_probs=29.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      ++.++||+||+|++|...++-....|.   +|+..++++.
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga---~Viat~~s~~   67 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGY---TVEASTGKAA   67 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCTT
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCC---ceEEecCchH
Confidence            467899999999999998877777774   6677776544

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.61  E-value=0.0025  Score=41.01  Aligned_cols=33  Identities=18%  Similarity=0.238  Sum_probs=25.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .+|+|+||+|++|...++-....|.  ..|+..++
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga--~~vi~~~~   64 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGC--SRVVGICG   64 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTC--SEEEEEES
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCC--cceecccc
Confidence            6899999999999998877766665  34554443

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.59  E-value=0.024  Score=36.32  Aligned_cols=87  Identities=14%  Similarity=0.098  Sum_probs=57.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH----HHHHHHHhcChhhhhhhhhccccCCcEEEEE
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP----KARLAEFSKLPVFERLRKECPAQLSRLHIIE   83 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..++.......    .+.+.++.+              ..++..+.
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~~~~~~~~~l~ell~--------------~sDii~i~  103 (188)
T d1sc6a1          42 ARGKKLGIIG-YGHIGTQLGILAESLGM---YVYFYDIENKLPLGNATQVQHLSDLLN--------------MSDVVSLH  103 (188)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCCCCCTTCEECSCHHHHHH--------------HCSEEEEC
T ss_pred             ccceEEEEee-cccchhhhhhhcccccc---eEeeccccccchhhhhhhhhhHHHHHh--------------hccceeec
Confidence            5788999987 99999999999988774   78888876432210    011222221              15788888


Q ss_pred             cccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         84 GDILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        84 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      +.+++...++-.+++.+.+++--++||.+
T Consensus       104 ~plt~~T~~li~~~~l~~mk~~a~lIN~a  132 (188)
T d1sc6a1         104 VPENPSTKNMMGAKEISLMKPGSLLINAS  132 (188)
T ss_dssp             CCSSTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred             ccCCcchhhhccHHHHhhCCCCCEEEEcC
Confidence            88887765555555666666656666665

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.55  E-value=0.0022  Score=36.47  Aligned_cols=37  Identities=19%  Similarity=0.336  Sum_probs=29.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +++++++|.|. |..|.++++.|.++|.   .|++.+.+..
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~---~v~~~D~~~~   39 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGV---TPRVMDTRMT   39 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTC---CCEEEESSSS
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCC---EEEEeeCCcC
Confidence            67899999996 6689999999999986   4566676544

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.54  E-value=0.004  Score=39.41  Aligned_cols=36  Identities=28%  Similarity=0.242  Sum_probs=30.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .++++++|.|+ |+.+++++.+|.+.|.   +|+++.|+.
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~---~i~I~nRt~   51 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDC---AVTITNRTV   51 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccce---EEEeccchH
Confidence            57899999995 7789999999999874   688888864

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.54  E-value=0.013  Score=38.09  Aligned_cols=93  Identities=14%  Similarity=0.111  Sum_probs=53.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEccc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDI   86 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   86 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..++....   ...........+.+-++      ..++..+.+.+
T Consensus        40 el~gk~vgIiG-~G~IG~~va~~l~~fg~---~V~~~d~~~~~---~~~~~~~~~~~l~~~l~------~sDii~~~~pl  106 (197)
T d1j4aa1          40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGA---KVITYDIFRNP---ELEKKGYYVDSLDDLYK------QADVISLHVPD  106 (197)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCCH---HHHHTTCBCSCHHHHHH------HCSEEEECSCC
T ss_pred             cccCCeEEEec-ccccchhHHHhHhhhcc---cccccCccccc---ccccceeeecccccccc------ccccccccCCc
Confidence            46789999999 89999999999988874   77777765431   11100000001100000      15677777766


Q ss_pred             CCCCCCCChhHHHHHhccccEEEecc
Q psy11862         87 LQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      +....++-..+..+.+++-.++||.+
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~s  132 (197)
T d1j4aa1         107 VPANVHMINDESIAKMKQDVVIVNVS  132 (197)
T ss_dssp             CGGGTTCBSHHHHHHSCTTEEEEECS
T ss_pred             cccccccccHHHHhhhCCccEEEecC
Confidence            66544444344455555556666664

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.51  E-value=0.0013  Score=41.23  Aligned_cols=36  Identities=33%  Similarity=0.464  Sum_probs=27.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      |-+|.|.||+|++|.++++.|.++.+....+..++.
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s   36 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS   36 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecc
Confidence            347899999999999999988777544556666553

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.51  E-value=0.015  Score=37.72  Aligned_cols=88  Identities=20%  Similarity=0.132  Sum_probs=56.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCH----HHHHHHHhcChhhhhhhhhccccCCcEEEE
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTP----KARLAEFSKLPVFERLRKECPAQLSRLHII   82 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +|+..++.......    ...+.++.+              ..++..+
T Consensus        42 ~l~~ktvgIiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~~~~~~~~~l~~l~~--------------~~D~v~~  103 (199)
T d1dxya1          42 ELGQQTVGVMG-TGHIGQVAIKLFKGFGA---KVIAYDPYPMKGDHPDFDYVSLEDLFK--------------QSDVIDL  103 (199)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCCSSCCTTCEECCHHHHHH--------------HCSEEEE
T ss_pred             cccceeeeeee-cccccccccccccccce---eeeccCCccchhhhcchhHHHHHHHHH--------------hccccee
Confidence            35678999998 89999999999988874   78888876532211    011222211              1567777


Q ss_pred             EcccCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         83 EGDILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        83 ~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      .+.+++...++-..+..+.+++--++||.+
T Consensus       104 ~~plt~~T~~li~~~~l~~mk~~a~lIN~a  133 (199)
T d1dxya1         104 HVPGIEQNTHIINEAAFNLMKPGAIVINTA  133 (199)
T ss_dssp             CCCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred             eecccccccccccHHHhhccCCceEEEecc
Confidence            777766654444445566666666777765

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.44  E-value=0.002  Score=40.91  Aligned_cols=37  Identities=30%  Similarity=0.304  Sum_probs=29.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      ++..|+|+||+|++|...++.....|.   +|+..++++.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga---~Viat~~s~~   59 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGY---DVVASTGNRE   59 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTC---CEEEEESSSS
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC---ceEEEecCHH
Confidence            355799999999999998877777785   6788887643

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.0083  Score=37.05  Aligned_cols=75  Identities=12%  Similarity=0.131  Sum_probs=48.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      -.++|+|. |.+|..+++.|.+.|++   ++++..++.  ...+.+....               ..++.++.+|.++++
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~---v~vId~d~~--~~~~~~~~~~---------------~~~~~vi~Gd~~d~~   62 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQN---VTVISNLPE--DDIKQLEQRL---------------GDNADVIPGDSNDSS   62 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCC---EEEEECCCH--HHHHHHHHHH---------------CTTCEEEESCTTSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCC---EEEEeccch--hHHHHHHHhh---------------cCCcEEEEccCcchH
Confidence            36888885 78999999999999864   455554321  1122233222               257889999999865


Q ss_pred             CCCChhHHHHH-hccccEEEecc
Q psy11862         91 LGIKDSDLLML-QEEVSVVFNGA  112 (152)
Q Consensus        91 ~~~~~~~~~~~-~~~~d~vi~~a  112 (152)
                            .+.++ ++.++.+|-+.
T Consensus        63 ------~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_          63 ------VLKKAGIDRCRAILALS   79 (153)
T ss_dssp             ------HHHHHTTTTCSEEEECS
T ss_pred             ------HHHHhccccCCEEEEcc
Confidence                  34443 45788888664

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.43  E-value=0.0099  Score=38.22  Aligned_cols=95  Identities=13%  Similarity=0.094  Sum_probs=56.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..++........+.. ......-..++-     ...++..+.+.++
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~~~~~~-~~~~~~~l~~~l-----~~sD~v~~~~plt  111 (188)
T d2naca1          42 LEAMHVGTVA-AGRIGLAVLRRLAPFDV---HLHYTDRHRLPESVEKEL-NLTWHATREDMY-----PVCDVVTLNCPLH  111 (188)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHGGGTC---EEEEECSSCCCHHHHHHH-TCEECSSHHHHG-----GGCSEEEECSCCC
T ss_pred             ccccceeecc-ccccchhhhhhhhccCc---eEEEEeeccccccccccc-cccccCCHHHHH-----Hhccchhhccccc
Confidence            5788999988 89999999999988874   788888765432111111 010000000000     1257777778887


Q ss_pred             CCCCCCChhHHHHHhccccEEEecc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      +...++-..+..+.+++--++||.+
T Consensus       112 ~~T~~li~~~~l~~mk~ga~lIN~a  136 (188)
T d2naca1         112 PETEHMINDETLKLFKRGAYIVNTA  136 (188)
T ss_dssp             TTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             ccchhhhHHHHHHhCCCCCEEEecC
Confidence            7654444444555555555667665

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.32  E-value=0.0085  Score=37.94  Aligned_cols=36  Identities=25%  Similarity=0.282  Sum_probs=29.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .++++++|.| +|+.+++++..|.+.+   .+|+++.|+.
T Consensus        16 ~~~k~vlIlG-aGGaarai~~aL~~~~---~~i~I~nR~~   51 (171)
T d1p77a1          16 RPNQHVLILG-AGGATKGVLLPLLQAQ---QNIVLANRTF   51 (171)
T ss_dssp             CTTCEEEEEC-CSHHHHTTHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHcccC---ceeeeccchH
Confidence            4788999998 5677999999998753   5899999864

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.31  E-value=0.017  Score=33.81  Aligned_cols=35  Identities=17%  Similarity=0.241  Sum_probs=28.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +++++++|.| +|.+|..-++.|++.|.   .|.+.+..
T Consensus        10 l~~k~vlVvG-~G~va~~ka~~ll~~ga---~v~v~~~~   44 (113)
T d1pjqa1          10 LRDRDCLIVG-GGDVAERKARLLLEAGA---RLTVNALT   44 (113)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTB---EEEEEESS
T ss_pred             eCCCEEEEEC-CCHHHHHHHHHHHHCCC---eEEEEecc
Confidence            6899999999 67799999999999984   66666543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.30  E-value=0.01  Score=37.73  Aligned_cols=38  Identities=18%  Similarity=0.319  Sum_probs=29.8

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +...+.+++|+|+ |++|...+..+...|.  .+|++.+++
T Consensus        25 ~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga--~~Vi~~~~~   62 (182)
T d1vj0a2          25 ESFAGKTVVIQGA-GPLGLFGVVIARSLGA--ENVIVIAGS   62 (182)
T ss_dssp             SCCBTCEEEEECC-SHHHHHHHHHHHHTTB--SEEEEEESC
T ss_pred             CCCCCCEEEEECC-Cccchhheeccccccc--ccccccccc
Confidence            3446789999986 8999998888877775  478888764

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.23  E-value=0.0035  Score=39.04  Aligned_cols=34  Identities=24%  Similarity=0.304  Sum_probs=29.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      |+|.|.|+ |.+|..++..|.+.|+   .|.+++|++.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~---~V~~~~r~~~   34 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGH---EVQGWLRVPQ   34 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC---ceEEEEcCHH
Confidence            68999997 9999999999999997   6778888654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.21  E-value=0.016  Score=36.40  Aligned_cols=33  Identities=18%  Similarity=0.075  Sum_probs=28.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .|++.|.|+ |.+|..++..|.+.|+   .|.+++|+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~---~V~~~~r~   33 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQ---SVLAWDID   33 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCC---EEEEEECC
Confidence            378999995 9999999999999997   67888875

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.16  E-value=0.044  Score=34.05  Aligned_cols=35  Identities=29%  Similarity=0.264  Sum_probs=27.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+.+++|+| +|++|...+..+...|.   +|++.+++
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga---~vi~v~~~   59 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGA---FVVCTARS   59 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcc---cccccchH
Confidence            3577899997 68999998877766663   78888764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.13  E-value=0.029  Score=34.98  Aligned_cols=37  Identities=14%  Similarity=0.152  Sum_probs=30.3

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+.+++|+|++|++|...+..+...|.  ..|++.+++
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~--~~V~~~~~~   62 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVR   62 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESS
T ss_pred             CCCCEEEEEeccccceeeeeeccccccc--ccccccccc
Confidence            3567999999999999998888888775  577777764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=96.10  E-value=0.0056  Score=38.21  Aligned_cols=37  Identities=30%  Similarity=0.401  Sum_probs=31.3

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .||+|+|.| +|+.|.+++..|.+.++++ +|.++.+.+
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~-~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLADPSI-EVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCTTS-EEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHcCCCC-cEEEEECCC
Confidence            478999999 7899999999999998776 677777654

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.06  E-value=0.022  Score=35.65  Aligned_cols=38  Identities=21%  Similarity=0.250  Sum_probs=29.2

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .-.+.+++|.|+ |++|...+..+...|.   +|+++++++.
T Consensus        25 ~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~---~vi~~~~~~~   62 (168)
T d1piwa2          25 CGPGKKVGIVGL-GGIGSMGTLISKAMGA---ETYVISRSSR   62 (168)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSST
T ss_pred             cCCCCEEEEECC-CCcchhHHHHhhhccc---cccccccchh
Confidence            346789999986 8999998877767774   6788887644

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.94  E-value=0.022  Score=36.67  Aligned_cols=95  Identities=9%  Similarity=0.051  Sum_probs=54.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHH-hcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEF-SKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .+.++++.|.| .|.||+.+++.+...|.   +++..++.....  ....... ....-+.++-.     ..++..+.+.
T Consensus        44 ~l~g~tvgIiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~--~~~~~~~~~~~~~l~~ll~-----~sD~v~l~~p  112 (191)
T d1gdha1          44 KLDNKTLGIYG-FGSIGQALAKRAQGFDM---DIDYFDTHRASS--SDEASYQATFHDSLDSLLS-----VSQFFSLNAP  112 (191)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECSSCCCH--HHHHHHTCEECSSHHHHHH-----HCSEEEECCC
T ss_pred             eecccceEEee-cccchHHHHHHHHhhcc---cccccccccccc--chhhcccccccCCHHHHHh-----hCCeEEecCC
Confidence            35689999988 89999999999988875   677777654321  1111100 00000000000     1567777777


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEecc
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      +++...++-.++..+.+++--++||.+
T Consensus       113 lt~~T~~li~~~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             CCchHhheecHHHhhCcCCccEEEecC
Confidence            776654444444555555555666655

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.93  E-value=0.025  Score=36.11  Aligned_cols=38  Identities=18%  Similarity=0.172  Sum_probs=28.1

Q ss_pred             cCCceEEE-cCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          8 YAGRSVLV-TGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilI-tG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      -.+.+++| +||+|++|...+.-....|.   ++++.+|++.
T Consensus        27 ~~g~~vli~~ga~g~vG~~aiqlAk~~Ga---~vI~~v~~~~   65 (189)
T d1gu7a2          27 TPGKDWFIQNGGTSAVGKYASQIGKLLNF---NSISVIRDRP   65 (189)
T ss_dssp             CTTTCEEEESCTTSHHHHHHHHHHHHHTC---EEEEEECCCT
T ss_pred             CCCCEEEEEeCCCchHHHHHHHHHhhcCC---eEEEEEeccc
Confidence            34556666 79999999998877777774   7788777654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.85  E-value=0.008  Score=40.20  Aligned_cols=39  Identities=21%  Similarity=0.204  Sum_probs=32.2

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++..+|+|.| .|++|.+++..|+..|.  .++.+++.+.
T Consensus        26 ~kL~~~~VliiG-~GglGs~va~~La~~Gv--g~i~lvD~D~   64 (247)
T d1jw9b_          26 EALKDSRVLIVG-LGGLGCAASQYLASAGV--GNLTLLDFDT   64 (247)
T ss_dssp             HHHHHCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECCCB
T ss_pred             HHHhCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCcc
Confidence            346678999999 77899999999999975  7888887654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.77  E-value=0.037  Score=35.32  Aligned_cols=93  Identities=15%  Similarity=0.115  Sum_probs=53.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDIL   87 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   87 (152)
                      +.++++.|.| .|.||+.+++.+...|.   +|+..++.....   +.........-++++-.     ..++..+.+.++
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~fg~---~v~~~d~~~~~~---~~~~~~~~~~~l~ell~-----~sDiv~~~~Plt  109 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAFGA---YVVAYDPYVSPA---RAAQLGIELLSLDDLLA-----RADFISVHLPKT  109 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECTTSCHH---HHHHHTCEECCHHHHHH-----HCSEEEECCCCS
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhccc---eEEeecCCCChh---HHhhcCceeccHHHHHh-----hCCEEEEcCCCC
Confidence            5678888888 89999999999988774   778877654311   11111000000011110     157777778877


Q ss_pred             CCCCCCChhHHHHHhccccEEEecc
Q psy11862         88 QANLGIKDSDLLMLQEEVSVVFNGA  112 (152)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~d~vi~~a  112 (152)
                      +...++-..+..+.+++--++||.+
T Consensus       110 ~~T~~lin~~~l~~mk~~a~lIN~s  134 (184)
T d1ygya1         110 PETAGLIDKEALAKTKPGVIIVNAA  134 (184)
T ss_dssp             TTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred             chhhhhhhHHHHhhhCCCceEEEec
Confidence            7654444444445555545666654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.76  E-value=0.0082  Score=37.63  Aligned_cols=35  Identities=34%  Similarity=0.412  Sum_probs=29.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |++|+|.| .|.+|..+++.|.+.|+.+ +|+..+|+
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~-~I~~~D~~   35 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKG-KIYGYDIN   35 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCS-EEEEECSC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCe-EEEEEECC
Confidence            46799997 6999999999999998765 78888875

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.009  Score=43.40  Aligned_cols=38  Identities=26%  Similarity=0.251  Sum_probs=30.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .+++.+|+|.|+ |++|.++++.|+..|.  ..+.+++.+.
T Consensus        34 ~l~~~kVlvvG~-GglG~ei~k~L~~~Gv--g~i~lvD~D~   71 (426)
T d1yovb1          34 LLDTCKVLVIGA-GGLGCELLKNLALSGF--RQIHVIDMDT   71 (426)
T ss_dssp             HHHHCCEEEECS-STTHHHHHHHHHTTTC--CCEEEECCCB
T ss_pred             HHhcCeEEEECC-CHHHHHHHHHHHHcCC--CeEEEEECCC
Confidence            456678999995 6799999999999875  5788777654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.69  E-value=0.019  Score=36.34  Aligned_cols=38  Identities=21%  Similarity=0.189  Sum_probs=28.3

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.-.+.+++|.|+ |++|...+..+...|.  .+|+..+++
T Consensus        24 ~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga--~~Vi~~d~~   61 (174)
T d1jqba2          24 DIEMGSSVVVIGI-GAVGLMGIAGAKLRGA--GRIIGVGSR   61 (174)
T ss_dssp             TCCTTCCEEEECC-SHHHHHHHHHHHTTTC--SCEEEECCC
T ss_pred             CCCCCCEEEEEcC-Ccchhhhhhhhhcccc--cccccccch
Confidence            3446789999975 8999988887777775  467777754

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.68  E-value=0.041  Score=34.50  Aligned_cols=37  Identities=14%  Similarity=0.021  Sum_probs=27.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .-.+.+++|.|+ |++|...+..+...|.  ..|++.+++
T Consensus        26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~--~~v~~~~~~   62 (174)
T d1f8fa2          26 VTPASSFVTWGA-GAVGLSALLAAKVCGA--SIIIAVDIV   62 (174)
T ss_dssp             CCTTCEEEEESC-SHHHHHHHHHHHHHTC--SEEEEEESC
T ss_pred             CCCCCEEEEeCC-CHHHhhhhhccccccc--ceeeeeccH
Confidence            346789999986 8999998888877776  456666643

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.55  E-value=0.027  Score=35.18  Aligned_cols=37  Identities=19%  Similarity=0.146  Sum_probs=27.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .-.+.+++|.|+ |++|...+..+...|.   ++++.++++
T Consensus        28 ~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga---~~i~~~~~~   64 (168)
T d1uufa2          28 AGPGKKVGVVGI-GGLGHMGIKLAHAMGA---HVVAFTTSE   64 (168)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSG
T ss_pred             CCCCCEEEEecc-chHHHHHHHHhhcccc---cchhhccch
Confidence            346789999985 8899988877766774   556666643

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.39  E-value=0.012  Score=36.46  Aligned_cols=50  Identities=24%  Similarity=0.284  Sum_probs=34.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHh
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFS   60 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~   60 (152)
                      |+++.|.|+||.||...+.-+.+. ++--+|+.++-..+-..+.+...++.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~Lsa~~N~~~L~~q~~~f~   50 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHN-PEHFRVVALVAGKNVTRMVEQCLEFS   50 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHC-TTTEEEEEEEESSCHHHHHHHHHHHC
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhC-CCCcEEEEEEecCcHHHHHHHHHHHh
Confidence            578999999999999988877766 33347777775544334444444443

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.36  E-value=0.073  Score=33.25  Aligned_cols=39  Identities=15%  Similarity=0.075  Sum_probs=30.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .-.+.+++|.|+ |++|...+..+...|.  .+|++.++++.
T Consensus        26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~--~~Vi~~~~~~~   64 (176)
T d2jhfa2          26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGA--ARIIGVDINKD   64 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred             CCCCCEEEEECC-CCcHHHHHHHHHHcCC--ceEEeecCcHH
Confidence            446789999998 6688888888888765  58888887543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.36  E-value=0.044  Score=34.69  Aligned_cols=32  Identities=28%  Similarity=0.304  Sum_probs=26.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |+|.|.| +|..|.+++..|.+.|+   .|.+.+|+
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~---~V~l~~r~   32 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGN---EVRIWGTE   32 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCC---EEEEECCG
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEEec
Confidence            5788889 68889999999999986   66777764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.083  Score=32.83  Aligned_cols=36  Identities=28%  Similarity=0.266  Sum_probs=28.4

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+.+++|.|+ |.+|...+..+...|.  .+|++.+++
T Consensus        25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~--~~Vi~~d~~   60 (171)
T d1pl8a2          25 TLGHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLS   60 (171)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESC
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHHcCC--ceEEeccCC
Confidence            45779999986 9999998888877775  578887764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.27  E-value=0.0064  Score=38.80  Aligned_cols=36  Identities=19%  Similarity=0.268  Sum_probs=28.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +..++|+||+|++|...++-....|.   +|+..++++.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga---~Via~~~~~~   67 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGY---QVVAVSGRES   67 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCGG
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCC---CeEEEecchh
Confidence            34899999999999998877777785   6777777543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.054  Score=34.14  Aligned_cols=35  Identities=26%  Similarity=0.348  Sum_probs=30.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      +.|++++|.|.+.-+|+.++..|.++|.   .|..+..
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~ga---tVt~~~~   71 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNA---TVTTCHS   71 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC---EEEEECT
T ss_pred             cccceEEEEecCCccchHHHHHHHhccC---ceEEEec
Confidence            6899999999999999999999999974   5655554

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.21  E-value=0.045  Score=34.37  Aligned_cols=34  Identities=18%  Similarity=0.250  Sum_probs=29.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      +.|++++|.|.+.-+|+.++..|.+.|.   .|+.+.
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~ga---tVt~~h   68 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGC---TTTVTH   68 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTC---EEEEEC
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhc---cccccc
Confidence            6899999999999999999999999875   555544

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.14  E-value=0.059  Score=33.92  Aligned_cols=38  Identities=13%  Similarity=0.104  Sum_probs=29.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .-.+.+++|.| .|++|...+..+...|.  .+|++.++++
T Consensus        26 v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga--~~Vi~~d~~~   63 (174)
T d1e3ia2          26 VTPGSTCAVFG-LGCVGLSAIIGCKIAGA--SRIIAIDING   63 (174)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTC--SEEEEECSCG
T ss_pred             CCCCCEEEEEC-CChHHHHHHHHHHHhCC--ceeeeeccch
Confidence            44678999997 59999998888888775  5777777643

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.07  E-value=0.054  Score=33.76  Aligned_cols=37  Identities=14%  Similarity=0.041  Sum_probs=28.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .-.+.+++|.|+ |++|...+..+...|.  ..|++.+++
T Consensus        26 ~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~--~~vi~~~~~   62 (176)
T d2fzwa2          26 LEPGSVCAVFGL-GGVGLAVIMGCKVAGA--SRIIGVDIN   62 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSC
T ss_pred             CCCCCEEEEecc-hhHHHHHHHHHHHHhc--CceEEEccc
Confidence            446789999987 5789888888887875  467776654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.04  E-value=0.014  Score=36.71  Aligned_cols=36  Identities=28%  Similarity=0.320  Sum_probs=29.9

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++++|.|+ |+.+++++..|.+.|.  .+|.++.|+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~--~~I~I~nR~~   51 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGF--EKLKIYARNV   51 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTC--CCEEEECSCH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEecccH
Confidence            5678999995 8899999999999875  5788888854

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.97  E-value=0.082  Score=33.16  Aligned_cols=39  Identities=15%  Similarity=0.094  Sum_probs=30.8

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.-.+.+++|.|+ |++|...+..+...|.  .+|++.++++
T Consensus        24 ~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~--~~Vi~~d~~~   62 (174)
T d1p0fa2          24 KVTPGSTCAVFGL-GGVGFSAIVGCKAAGA--SRIIGVGTHK   62 (174)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCG
T ss_pred             CCCCCCEEEEECC-CchhHHHHHHHHHcCC--ceeeccCChH
Confidence            3456789999985 8999999888888875  5788887753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.13  Score=32.14  Aligned_cols=35  Identities=29%  Similarity=0.263  Sum_probs=30.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .+.||+++|.| .|.+|+.+++.+...|.   +|.+...
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~---~V~v~e~   55 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGA---RVIITEI   55 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECS
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCC---eeEeeec
Confidence            46899999999 89999999999999984   7777665

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=94.54  E-value=0.026  Score=35.06  Aligned_cols=32  Identities=25%  Similarity=0.300  Sum_probs=26.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |+|.|.| .|.+|..+++.|.+.|+   .|+.++|+
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~---~V~~~d~~   32 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGH---YLIGVSRQ   32 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCC---EEEEEECC
Confidence            4678887 69999999999999987   67778875

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.53  E-value=0.023  Score=34.86  Aligned_cols=35  Identities=26%  Similarity=0.394  Sum_probs=29.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .+++++++|.|| |.+|..-++.|++.|.   +|.+++.
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA---~VtVvap   44 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGC---KLTLVSP   44 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTC---EEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeC
Confidence            378999999996 7899999999999985   5666553

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.51  E-value=0.04  Score=32.60  Aligned_cols=36  Identities=19%  Similarity=0.271  Sum_probs=29.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      ..++++|.| +|++|.+++..|.+.|.   +|.++.+.+.
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~---~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGV---HVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccc---eEEEEeeccc
Confidence            357888888 89999999999999985   6777777654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.51  E-value=0.11  Score=32.69  Aligned_cols=39  Identities=15%  Similarity=0.116  Sum_probs=30.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      .-.+.+++|+|+ |++|...+..+...|.  .+|+++++++.
T Consensus        27 ~~~g~tVlI~G~-GgvGl~ai~~ak~~G~--~~Vi~vd~~~~   65 (176)
T d1d1ta2          27 VKPGSTCVVFGL-GGVGLSVIMGCKSAGA--SRIIGIDLNKD   65 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCC--ceEEEecCcHH
Confidence            345779999985 9999999988888765  68899887543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.30  E-value=0.11  Score=30.20  Aligned_cols=36  Identities=25%  Similarity=0.270  Sum_probs=29.6

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      ...++.|.| +|-+|+-++.+..+.|+   ++++++.+++
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~---~v~v~d~~~~   45 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGV---EVIAVDRYAD   45 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTC---EEEEEESSTT
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCC---EEEEEcCCCC
Confidence            346899999 78999999999999987   6788887654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.26  E-value=0.038  Score=35.45  Aligned_cols=36  Identities=22%  Similarity=0.332  Sum_probs=30.5

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |.-++|.|.|+ |.+|..++..++..|+   .|+++++++
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~---~V~l~D~~~   37 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGH---TVVLVDQTE   37 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCC---cEEEEECCh
Confidence            44579999996 9999999999999997   678888764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.18  E-value=0.08  Score=31.22  Aligned_cols=33  Identities=18%  Similarity=0.221  Sum_probs=25.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++|.| +|++|.+++..|.+.|.+|   .++.|++
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~V---tii~~~~   53 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDV---TVMVRSI   53 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCE---EEEESSS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeE---EEEEech
Confidence            4678877 8999999999999999754   4445654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.16  E-value=0.029  Score=34.69  Aligned_cols=49  Identities=24%  Similarity=0.222  Sum_probs=32.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHH
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEF   59 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~   59 (152)
                      .+++.|.|+||.||.....-+.+. ++--+|+.++-..+-..+.+...++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~lsa~~N~~~L~~q~~ef   50 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERN-LDRYQVIALTANRNVKDLADAAKRT   50 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT-GGGEEEEEEEESSCHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcC-CCCcEEEEEEeCCCHHHHHHHHHhh
Confidence            478999999999999988877665 2223777776554433344444443

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.14  E-value=0.056  Score=31.94  Aligned_cols=35  Identities=23%  Similarity=0.362  Sum_probs=28.5

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++++|.| +|++|.+++..|.+.|.   +|.++.+.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~---~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGK---KVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccce---EEEEEEecC
Confidence            457888887 78999999999999986   667776654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.04  E-value=0.053  Score=31.94  Aligned_cols=36  Identities=22%  Similarity=0.328  Sum_probs=28.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG   49 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~   49 (152)
                      .++++|.| +|++|.+++..|.+.|.   +|.++.|.+..
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~---~Vtlv~~~~~l   67 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGY---HVKLIHRGAMF   67 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTC---EEEEECSSSCC
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccc---eEEEEeccccc
Confidence            36788877 89999999999999986   66677776543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.01  E-value=0.35  Score=29.82  Aligned_cols=35  Identities=26%  Similarity=0.327  Sum_probs=26.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+.+++|.|+ |++|...+..+...|.  ..|+..+++
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~--~~vv~~~~~   66 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTP--ATVIALDVK   66 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCC--CEEEEEESS
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcC--cccccccch
Confidence            5678999885 9999998888877775  466666653

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.92  E-value=0.047  Score=33.86  Aligned_cols=33  Identities=18%  Similarity=0.288  Sum_probs=27.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |++|.+.| .|.+|.++++.|.+.||   .|...+|+
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~---~v~~~d~~   33 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGY---LLNVFDLV   33 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTC---EEEEECSS
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCC---eEEEEECc
Confidence            46788887 89999999999999998   56777775

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.62  E-value=0.47  Score=30.06  Aligned_cols=38  Identities=18%  Similarity=0.063  Sum_probs=27.5

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +.-.+.+++|.|+ |++|...+..+...|.  .+|++.+++
T Consensus        22 ~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga--~~Vi~~d~~   59 (195)
T d1kola2          22 GVGPGSTVYVAGA-GPVGLAAAASARLLGA--AVVIVGDLN   59 (195)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESC
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHhhcc--cceeeeccc
Confidence            3456789999985 8999776666655554  578887754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.60  E-value=0.068  Score=31.12  Aligned_cols=33  Identities=33%  Similarity=0.376  Sum_probs=27.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++|.| +|++|.+++..|.+.|.   +|.++.|.+
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~---~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGT---KVTILEGAG   55 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSS
T ss_pred             CeEEEEC-CCccceeeeeeeccccc---EEEEEEecc
Confidence            5788888 79999999999999985   667776654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.51  E-value=0.27  Score=30.09  Aligned_cols=36  Identities=19%  Similarity=0.111  Sum_probs=27.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .-.+.+++|.|+ |++|...+..+...|.   +|++.+++
T Consensus        25 ~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~---~Vi~~~~~   60 (166)
T d1llua2          25 ARPGQWVAISGI-GGLGHVAVQYARAMGL---HVAAIDID   60 (166)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred             CCCCCEEEEeec-cccHHHHHHHHHHcCC---ccceecch
Confidence            346789999885 9999998776666663   77888764

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.43  E-value=0.063  Score=31.45  Aligned_cols=34  Identities=21%  Similarity=0.478  Sum_probs=28.2

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      -++++|.| +|++|.+++..|.+.|.   +|.++.|.+
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g~---~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLGI---DSYIFARGN   55 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhccc---cceeeehhc
Confidence            36788888 79999999999999985   777887754

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.38  E-value=0.045  Score=34.49  Aligned_cols=35  Identities=14%  Similarity=0.282  Sum_probs=28.0

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++++|.| +|+.+++++.+|.+.|    +|+++.|+.
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~~~----~i~I~nR~~   50 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAKDN----NIIIANRTV   50 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTSSS----EEEEECSSH
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHcccc----ceeeehhhh
Confidence            6889999999 5668999999986543    788888864

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.38  E-value=0.057  Score=34.75  Aligned_cols=32  Identities=19%  Similarity=0.179  Sum_probs=26.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |+|.|.| .|++|..++..|++.|+   .|++++.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~---~V~g~D~n   32 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGH---EVIGVDVS   32 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC---EEEEECSC
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCC---cEEEEeCC
Confidence            5678885 99999999999999997   67777753

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.29  E-value=0.078  Score=33.63  Aligned_cols=35  Identities=26%  Similarity=0.358  Sum_probs=28.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |+|+|.| +|++|.+++..|.+.+.+. .|.++.|..
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~-~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDA-EIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTS-EEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCC-eEEEEeCCC
Confidence            5788888 6799999999999987664 677777654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.22  E-value=0.08  Score=31.20  Aligned_cols=33  Identities=18%  Similarity=0.225  Sum_probs=27.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++|.| +|++|.+++..|.+.|.   +|.++.+.+
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~---~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGS---KVTVVEFQP   56 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSS
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCc---ceeEEEecc
Confidence            5788888 79999999999999985   677776654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.20  E-value=0.11  Score=32.71  Aligned_cols=35  Identities=20%  Similarity=0.307  Sum_probs=29.3

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      -++|++++|.|.+.-+|+.++..|+++|.   .|..+.
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~ga---TVt~~~   60 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGA---TVYSVD   60 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSC---EEEEEC
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCC---EEEEec
Confidence            47899999999999999999999999874   554443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.15  E-value=0.1  Score=30.37  Aligned_cols=36  Identities=17%  Similarity=0.131  Sum_probs=28.9

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..+++++|.| +|++|.+++..|.+.|.   .+.++.|.+
T Consensus        20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g~---~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVG-GSKTAVEYGCFFNATGR---RTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcch---hheEeeccc
Confidence            3467888887 89999999999999874   667777754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.02  E-value=0.075  Score=32.82  Aligned_cols=32  Identities=28%  Similarity=0.361  Sum_probs=26.9

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |+|-|.| .|.+|..+++.|++.|+   .|+..+|+
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~---~V~~~d~~   32 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGY---SLVVSDRN   32 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC---EEEEECSC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCC---eEEEEeCC
Confidence            4677777 79999999999999997   67777775

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.96  E-value=0.089  Score=30.63  Aligned_cols=33  Identities=21%  Similarity=0.220  Sum_probs=27.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++|.| +|++|.+++..|.+.|.   +|.++.|.+
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~---~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGA---KTHLFEMFD   54 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhcccc---EEEEEeecc
Confidence            5788877 89999999999999986   667777754

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.95  E-value=0.099  Score=30.60  Aligned_cols=33  Identities=24%  Similarity=0.218  Sum_probs=27.1

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++|.| +|+||.+++..|.+.|.   .|.++.+..
T Consensus        23 ~~i~IiG-~G~ig~E~A~~l~~~G~---~Vtiv~~~~   55 (119)
T d3lada2          23 GKLGVIG-AGVIGLELGSVWARLGA---EVTVLEAMD   55 (119)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSS
T ss_pred             CeEEEEC-CChHHHHHHHHHHHcCC---ceEEEEeec
Confidence            5788888 89999999999999986   566666654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.92  E-value=0.089  Score=31.08  Aligned_cols=33  Identities=15%  Similarity=0.279  Sum_probs=27.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++|.| +|++|.+++..|.+.|.   +|.++.|.+
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~---~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGS---KTSLMIRHD   55 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCc---EEEEEeecc
Confidence            5788888 78999999999999985   677777764

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.85  E-value=0.5  Score=28.74  Aligned_cols=35  Identities=20%  Similarity=0.151  Sum_probs=25.7

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      -.+.+++|.| .|.+|...+..+...|.   +|++.+++
T Consensus        26 ~~g~~vlv~G-~G~iG~~a~~~a~~~g~---~v~~~~~~   60 (168)
T d1rjwa2          26 KPGEWVAIYG-IGGLGHVAVQYAKAMGL---NVVAVDIG   60 (168)
T ss_dssp             CTTCEEEEEC-CSTTHHHHHHHHHHTTC---EEEEECSC
T ss_pred             CCCCEEEEee-cccchhhhhHHHhcCCC---eEeccCCC
Confidence            3577899987 59999887777766664   67777654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.72  E-value=0.56  Score=29.05  Aligned_cols=35  Identities=26%  Similarity=0.331  Sum_probs=29.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .+.||+++|.| -|.+|+.++.++...|.   +|++...
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga---~V~V~E~   54 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGA---RVYITEI   54 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTC---EEEEECS
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCC---EEEEEec
Confidence            36899999998 99999999999999984   6666654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.72  E-value=0.043  Score=35.10  Aligned_cols=36  Identities=22%  Similarity=0.322  Sum_probs=29.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .|.|++|.|.| +|.-|.+++..|.+.|+   .|.+.+|+
T Consensus         4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g~---~V~l~~r~   39 (189)
T d1n1ea2           4 LLYLNKAVVFG-SGAFGTALAMVLSKKCR---EVCVWHMN   39 (189)
T ss_dssp             CCCEEEEEEEC-CSHHHHHHHHHHHTTEE---EEEEECSC
T ss_pred             cceeceEEEEC-CCHHHHHHHHHHHHcCC---eEEEEEec
Confidence            35667899999 66789999999999886   56777774

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.68  E-value=0.11  Score=31.03  Aligned_cols=36  Identities=25%  Similarity=0.421  Sum_probs=29.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      ..++++|.| +|++|.+++..|.+.|.   .|.++.+.+.
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~---~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANM---HVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCc---ceeeeeeccc
Confidence            467899988 89999999999999985   6677776543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.67  E-value=0.11  Score=30.14  Aligned_cols=33  Identities=18%  Similarity=0.291  Sum_probs=27.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++|.| +|++|.+++..|.+.|.   .|.++.|.+
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~---~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGA---QVSVVEARE   54 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTC---EEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhccc---ceEEEeeec
Confidence            5777777 89999999999999986   667777654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=92.65  E-value=0.13  Score=30.29  Aligned_cols=69  Identities=20%  Similarity=0.274  Sum_probs=43.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQAN   90 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   90 (152)
                      |.++|+| .|.+|.++++.|...     .++++..++.   ..+.+.   .               .++.++.+|.++++
T Consensus         1 kHivI~G-~g~~g~~l~~~L~~~-----~i~vi~~d~~---~~~~~~---~---------------~~~~~i~Gd~~~~~   53 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELRGS-----EVFVLAEDEN---VRKKVL---R---------------SGANFVHGDPTRVS   53 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSCGG-----GEEEEESCTT---HHHHHH---H---------------TTCEEEESCTTSHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHcCC-----CCEEEEcchH---HHHHHH---h---------------cCccccccccCCHH
Confidence            4578888 678899999998543     3445554322   122221   1               46788899998854


Q ss_pred             CCCChhHHHHH-hccccEEEecc
Q psy11862         91 LGIKDSDLLML-QEEVSVVFNGA  112 (152)
Q Consensus        91 ~~~~~~~~~~~-~~~~d~vi~~a  112 (152)
                            .+.++ ++.++.++-+.
T Consensus        54 ------~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1          54 ------DLEKANVRGARAVIVNL   70 (129)
T ss_dssp             ------HHHHTTCTTCSEEEECC
T ss_pred             ------HHHHhhhhcCcEEEEec
Confidence                  34443 45778887553

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.62  E-value=0.067  Score=33.58  Aligned_cols=36  Identities=14%  Similarity=0.099  Sum_probs=29.1

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +++|+|.| +|..|...+..|.+.|+.  .|.++.|.+.
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~--~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYS--DITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCC--CEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCC--eEEEEEecCc
Confidence            57889989 789999999999999873  3566777654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.61  E-value=0.12  Score=32.01  Aligned_cols=35  Identities=23%  Similarity=0.252  Sum_probs=27.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      ++++|+|.| +|++|.+++..|.+.|+++ .|+...+
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v-~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEG-NIRLVGD   36 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCS-EEEEECS
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCce-EEEEecC
Confidence            356788887 8999999999999999876 4444443

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=92.31  E-value=0.52  Score=28.97  Aligned_cols=39  Identities=13%  Similarity=0.090  Sum_probs=27.1

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.-.+.+++|.|+ |++|...+..+...|.  ..|++.++++
T Consensus        25 ~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~--~~Vi~~~~~~   63 (175)
T d1cdoa2          25 KVEPGSTCAVFGL-GAVGLAAVMGCHSAGA--KRIIAVDLNP   63 (175)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCG
T ss_pred             CCCCCCEEEEEec-CCccchHHHHHHHHhh--chheeecchH
Confidence            3446789999985 5577776777766654  5788877653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.24  E-value=0.13  Score=30.30  Aligned_cols=34  Identities=21%  Similarity=0.302  Sum_probs=28.2

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      ++++|.| +|++|.+++..|.+.|.   +|.++.|.+.
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~---~Vtvi~~~~~   59 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGS---EVTVVEFASE   59 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTC---EEEEECSSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCC---eEEEEEEccc
Confidence            5788888 89999999999999995   6777777653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.14  E-value=0.14  Score=30.57  Aligned_cols=25  Identities=16%  Similarity=0.162  Sum_probs=22.0

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCP   35 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~   35 (152)
                      |++.|.|++|..|+.+.+.+.+.++
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~   25 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGH   25 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCC
Confidence            5799999999999999988877765

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=92.14  E-value=0.075  Score=33.77  Aligned_cols=34  Identities=15%  Similarity=0.150  Sum_probs=28.5

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      -++|.|.|+ |.+|..++..++..|+   .|.++++++
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~---~V~l~D~~~   37 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGT---PILMKDINE   37 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTC---CEEEECSSH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC---eEEEEECCH
Confidence            478999996 9999999999999997   567777754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=91.86  E-value=0.13  Score=31.28  Aligned_cols=34  Identities=24%  Similarity=0.336  Sum_probs=27.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |+|.+.| +|.+|.++++.|++.|+  .++++.+|++
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~--~~i~v~~r~~   34 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGG--YRIYIANRGA   34 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCS--CEEEEECSSH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCC--CcEEEEeCCh
Confidence            4677887 59999999999999874  3788888753

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=91.81  E-value=0.81  Score=28.12  Aligned_cols=38  Identities=24%  Similarity=0.417  Sum_probs=27.1

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |+..++.|.| .|.+|+..++.+.+. .++..+.+.+|+.
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~-~~~elvav~~~~~   38 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQ-PDMDLVGIFSRRA   38 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTC-SSEEEEEEEESSS
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhC-CCcEEEEEEeccc
Confidence            4456788888 699999999988875 4554555555543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.80  E-value=0.11  Score=34.22  Aligned_cols=34  Identities=24%  Similarity=0.207  Sum_probs=27.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +|+|+|.| +|.-|...+..|.+.|+   +|.++.+++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~---~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGL---NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSC---EEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCC---CEEEEeCCC
Confidence            57899998 78899999999999987   667776543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.71  E-value=0.14  Score=35.21  Aligned_cols=35  Identities=26%  Similarity=0.479  Sum_probs=28.4

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.|+|+|.| +|..|...+..|.+.|+   .|.++.++.
T Consensus         1 k~KKI~IIG-aG~sGL~aA~~L~k~G~---~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVG-AGFSGAVIGRQLAEKGH---QVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEEESSS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCCC---CEEEEECCC
Confidence            368899998 78999999999999986   666776543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.64  E-value=0.065  Score=33.45  Aligned_cols=36  Identities=25%  Similarity=0.278  Sum_probs=26.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ..+|.|.|++|..|+.+++.+.+.. ++.-+..++|.
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~-~~~lv~~~~~~   39 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALERE   39 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecc
Confidence            3689999999999999999988862 44333444554

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.62  E-value=0.16  Score=29.96  Aligned_cols=33  Identities=12%  Similarity=0.183  Sum_probs=27.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++++|.| +|++|.+++..|.+.|.   +|.++.+.+
T Consensus        27 ~~vvIiG-gG~IG~E~A~~~~~~G~---~Vtive~~~   59 (125)
T d1ojta2          27 GKLLIIG-GGIIGLEMGTVYSTLGS---RLDVVEMMD   59 (125)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHHTC---EEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHhhcCCC---EEEEEEeec
Confidence            5788888 89999999999999985   677776654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.60  E-value=0.14  Score=31.10  Aligned_cols=33  Identities=18%  Similarity=0.133  Sum_probs=25.7

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |+|.|.| .|.+|+.+++.|.+.|+   .+....+.+
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~---~v~~~~~~~   33 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGV---EVVTSLEGR   33 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTC---EEEECCTTC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCC---eEEEEcCch
Confidence            4677776 79999999999999987   555555543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.53  E-value=0.17  Score=32.81  Aligned_cols=34  Identities=32%  Similarity=0.354  Sum_probs=28.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .++|+|.| +|..|...+..|.+.|+   +|.++.|..
T Consensus         6 ~~kVvVIG-aGiaGl~~A~~L~~~G~---~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLG-SGVIGLSSALILARKGY---SVHILARDL   39 (268)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSC
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHCCC---CEEEEeCCC
Confidence            35799999 78999999999999997   677777753

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.39  E-value=0.11  Score=32.51  Aligned_cols=32  Identities=31%  Similarity=0.331  Sum_probs=26.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |+|-|.| .|..|.++++.|++.|+   .|++.+|+
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~---~V~~~dr~   33 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGF---KVAVFNRT   33 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTC---CEEEECSS
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCC---eEEEEECC
Confidence            4677777 89999999999999998   45677774

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.35  E-value=0.19  Score=30.25  Aligned_cols=33  Identities=21%  Similarity=0.232  Sum_probs=25.2

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      +|.|.|++|..|+.+++.+.+. .+..-+..+++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~-~~~~l~~~~d~   33 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAA-DDLTLSAELDA   33 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHS-TTSEEEEEECT
T ss_pred             CEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEec
Confidence            6899999999999999988776 35544445554

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=91.15  E-value=0.19  Score=32.40  Aligned_cols=35  Identities=23%  Similarity=0.277  Sum_probs=29.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      .++++++.|-| .|.+|+++++.|.+.|.   +|++.+.
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Ga---kvvv~d~   58 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGA---QLLVADT   58 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEecc
Confidence            57899999998 88899999999999985   6666553

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=91.00  E-value=0.14  Score=31.98  Aligned_cols=34  Identities=18%  Similarity=0.204  Sum_probs=28.0

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..+|-+.| .|.+|.++++.|++.|+   .|+..+|++
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G~---~V~v~dr~~   35 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHGF---VVCAFNRTV   35 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTC---CEEEECSST
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCCC---eEEEEcCCH
Confidence            35677888 79999999999999998   567778764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=90.99  E-value=0.22  Score=31.43  Aligned_cols=36  Identities=14%  Similarity=0.141  Sum_probs=30.6

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      -+.++|+|.| +|..|.+.+..|.++|+   +|.++.+.+
T Consensus        41 ~~~k~V~IIG-aGPAGL~AA~~la~~G~---~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVG-AGPAGLAFAINAAARGH---QVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEEESSS
T ss_pred             CCCcEEEEEC-ccHHHHHHHHHHHhhcc---ceEEEeccC
Confidence            4568999999 78999999999999998   677887764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.77  E-value=0.12  Score=29.52  Aligned_cols=38  Identities=21%  Similarity=0.212  Sum_probs=28.8

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..+++|+|+|.| +|..|..++..|.+.+.   +++...|+.
T Consensus        28 ~~f~gK~VlVVG-~g~Sa~dia~~l~~~ak---~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVG-GASSANDLVRHLTPVAK---HPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEEC-SSHHHHHHHHHHTTTSC---SSEEEECTT
T ss_pred             hhcCCCeEEEEC-CCCCHHHHHHHHHHhcC---EEEEEEecC
Confidence            347899999999 66889999999988753   445555554

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.21  E-value=0.36  Score=27.87  Aligned_cols=37  Identities=27%  Similarity=0.373  Sum_probs=27.4

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      ++++|.| +|++|.+++..|.+.+..-..|.++.|.+.
T Consensus        21 ~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          21 RRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             SEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            5788888 599999999887776543346777777543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.13  E-value=0.93  Score=26.79  Aligned_cols=36  Identities=17%  Similarity=0.175  Sum_probs=27.3

Q ss_pred             CCceEEEcCCcc----------hhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTG----------FMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G----------~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.++++|.|++.          +.+.+.+++|.+.|+   +++++..++
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~---~~iliN~NP   51 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY---RVINVNSNP   51 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC---EEEEECSCT
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC---eEEEecCch
Confidence            458999999844          478899999999997   556665544

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.07  E-value=1.3  Score=27.33  Aligned_cols=19  Identities=5%  Similarity=-0.260  Sum_probs=15.3

Q ss_pred             HHHHhccccEEEecccccc
Q psy11862         98 LLMLQEEVSVVFNGAASLK  116 (152)
Q Consensus        98 ~~~~~~~~d~vi~~a~~~~  116 (152)
                      ..+.+++.|+||..++...
T Consensus        71 ~~~al~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          71 RRRALDGADFVTTQFRVGG   89 (169)
T ss_dssp             HHHHHTTCSEEEECCCTTH
T ss_pred             chhhcCCCCEEEEccccCC
Confidence            4556789999999998764

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.98  E-value=0.24  Score=31.81  Aligned_cols=34  Identities=18%  Similarity=0.215  Sum_probs=26.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCc---EEEEeec
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIG---KVYILCR   45 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~---~v~~~~r   45 (152)
                      |+|+|.| +|-+|...+..|.+.|+++.   ++..+++
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v~v~e~~~i~~~   37 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSVLQPLDVKVYAD   37 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTTSSSCEEEEEES
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCceEEeeeeeccc
Confidence            5788888 78999999999999998763   4444443

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.55  E-value=0.21  Score=30.41  Aligned_cols=32  Identities=16%  Similarity=0.252  Sum_probs=25.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |++.+.| +|-+|.++++.|.+.|+   .+++..|+
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~---~i~v~~r~   32 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPH---ELIISGSS   32 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSC---EEEEECSS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCC---eEEEEcCh
Confidence            4677776 89999999999999876   66777764

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.48  E-value=0.27  Score=32.02  Aligned_cols=34  Identities=18%  Similarity=0.123  Sum_probs=28.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      -++|+|.| +|..|..++..|.+.|+   +|.++.|++
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G~---~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAGV---DVDVYERSP   37 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCCC---CEEEEeCCC
Confidence            36789988 78999999999999986   677888754

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.42  E-value=0.3  Score=33.41  Aligned_cols=36  Identities=25%  Similarity=0.225  Sum_probs=28.6

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +|+|+|.| +|..|...+..|++.|... .|.++-|+.
T Consensus         4 ~KrVaIIG-aG~sGl~~A~~L~~~~~~~-~v~vfEk~~   39 (335)
T d2gv8a1           4 IRKIAIIG-AGPSGLVTAKALLAEKAFD-QVTLFERRG   39 (335)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCCS-EEEEECSSS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHhCCCC-CEEEEECCC
Confidence            57899998 7899999999998876432 778888774

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.38  E-value=0.37  Score=31.22  Aligned_cols=37  Identities=27%  Similarity=0.204  Sum_probs=29.7

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ....++++|.| +|..|...+..|.++|+   .+.++.++.
T Consensus        46 ~~~~k~VvIIG-aGpAGl~aA~~l~~~G~---~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVG-AGPSGSEAARVLMESGY---TVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSS
T ss_pred             ccCCceEEEEc-ccHHHHHHHHHHHHhcc---ceeeEeecc
Confidence            34678999999 78999999999999997   556666544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=89.11  E-value=0.78  Score=28.53  Aligned_cols=76  Identities=13%  Similarity=0.154  Sum_probs=48.9

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcccCCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGDILQA   89 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   89 (152)
                      -.+++|.| .|-.|..-++.....|   ..|.+++.+..   ..+.++....               ..+.+.   ..+ 
T Consensus        32 pa~V~ViG-aGvaG~~A~~~A~~lG---A~V~~~D~~~~---~l~~l~~~~~---------------~~~~~~---~~~-   85 (168)
T d1pjca1          32 PGKVVILG-GGVVGTEAAKMAVGLG---AQVQIFDINVE---RLSYLETLFG---------------SRVELL---YSN-   85 (168)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCHH---HHHHHHHHHG---------------GGSEEE---ECC-
T ss_pred             CcEEEEEC-CChHHHHHHHHHhhCC---CEEEEEeCcHH---HHHHHHHhhc---------------ccceee---hhh-
Confidence            35888888 6889999999999988   47888886422   1222222211               222222   222 


Q ss_pred             CCCCChhHHHHHhccccEEEecccccc
Q psy11862         90 NLGIKDSDLLMLQEEVSVVFNGAASLK  116 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~d~vi~~a~~~~  116 (152)
                           .+.+.+.++.+|+||.++-...
T Consensus        86 -----~~~l~~~~~~aDivI~aalipG  107 (168)
T d1pjca1          86 -----SAEIETAVAEADLLIGAVLVPG  107 (168)
T ss_dssp             -----HHHHHHHHHTCSEEEECCCCTT
T ss_pred             -----hhhHHHhhccCcEEEEeeecCC
Confidence                 2357888889999999886543

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.66  E-value=1.2  Score=27.26  Aligned_cols=19  Identities=5%  Similarity=-0.256  Sum_probs=15.4

Q ss_pred             HHHHhccccEEEecccccc
Q psy11862         98 LLMLQEEVSVVFNGAASLK  116 (152)
Q Consensus        98 ~~~~~~~~d~vi~~a~~~~  116 (152)
                      ..+.++++|+||..++...
T Consensus        65 ~~~~l~~aDvVVita~~~~   83 (162)
T d1up7a1          65 FEGAVVDAKYVIFQFRPGG   83 (162)
T ss_dssp             HHHHHTTCSEEEECCCTTH
T ss_pred             cccccCCCCEEEEecccCC
Confidence            4667789999999998754

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=88.52  E-value=0.41  Score=29.39  Aligned_cols=35  Identities=23%  Similarity=0.264  Sum_probs=23.6

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEe-ecCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYIL-CRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~-~r~~   47 (152)
                      .++.|.| +|++|..+...+++..+. ..++++ +|+.
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~-~el~avas~~~   40 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKY-LEMGAMVGIDA   40 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSS-EEEEEEECSCT
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCc-ceEEEEEecch
Confidence            5899999 999999766556665333 456555 4543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=88.27  E-value=0.61  Score=26.73  Aligned_cols=37  Identities=16%  Similarity=0.214  Sum_probs=26.8

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      ++++|.| +|++|.+++..|.+....-..|.++.|.+.
T Consensus        19 ~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          19 KRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             SEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CeEEEEC-CChHHHHHHHHhHhhcccccccceeccccc
Confidence            5788888 789999999877665322247788877653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.22  E-value=0.5  Score=28.51  Aligned_cols=35  Identities=31%  Similarity=0.419  Sum_probs=26.6

Q ss_pred             CceEEEc-CCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVT-GGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilIt-G~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ++.++|. .++|++|.+++..|.+.|.   +|.++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~---~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGH---EVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTC---EEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCC---eEEEEecCC
Confidence            3455554 4679999999999999996   667777654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.15  E-value=0.26  Score=32.43  Aligned_cols=31  Identities=16%  Similarity=0.303  Sum_probs=25.9

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |+|.| +|..|..++..|.+.|.   +|.++.+..
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~---~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENK---NTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCC---cEEEEeCCC
Confidence            77888 78999999999999986   667787754

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.75  E-value=1.3  Score=29.89  Aligned_cols=27  Identities=30%  Similarity=0.336  Sum_probs=21.1

Q ss_pred             cchhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862         19 TGFMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus        19 ~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +|..|.+++++++.+|+   .|.++.+..+
T Consensus        45 SGk~G~alA~~~~~~Ga---~V~li~g~~s   71 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGY---GVLFLYRARS   71 (290)
T ss_dssp             CCHHHHHHHHHHHHTTC---EEEEEEETTS
T ss_pred             chHHHHHHHHHHHHcCC---EEEEEecCCc
Confidence            46799999999999997   6666665543

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.73  E-value=0.42  Score=31.81  Aligned_cols=34  Identities=21%  Similarity=0.273  Sum_probs=28.1

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +-++|+|.| +|..|...+..|.+.|+   +|.++.+.
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~---~V~vlE~~   62 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGH---QVTVLEAS   62 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTC---EEEEECSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCC---CEEEEeCC
Confidence            457899999 78999999999999997   66777654

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=87.63  E-value=0.46  Score=29.33  Aligned_cols=31  Identities=16%  Similarity=0.227  Sum_probs=24.9

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      +|+|.| +|++|.+++..|.+.|+++. ++...
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v~-i~~~~   35 (183)
T d1d7ya1           5 PVVVLG-AGLASVSFVAELRQAGYQGL-ITVVG   35 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCSC-EEEEE
T ss_pred             CEEEEC-ccHHHHHHHHHHHhcCCceE-EEEEe
Confidence            477888 89999999999999998874 44443

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=87.62  E-value=1.3  Score=24.52  Aligned_cols=35  Identities=20%  Similarity=0.083  Sum_probs=25.1

Q ss_pred             CCceEEEcCCcchhH-HHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMG-KVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG-~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++.+.| -|++| +++++.|.++|+   .|...++..
T Consensus         7 ~~~~ihfiG-igG~GMs~LA~~L~~~G~---~VsGSD~~~   42 (96)
T d1p3da1           7 RVQQIHFIG-IGGAGMSGIAEILLNEGY---QISGSDIAD   42 (96)
T ss_dssp             TCCEEEEET-TTSTTHHHHHHHHHHHTC---EEEEEESCC
T ss_pred             hCCEEEEEE-ECHHHHHHHHHHHHhCCC---EEEEEeCCC
Confidence            457888888 44455 677899999998   566666643

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.61  E-value=1  Score=28.79  Aligned_cols=86  Identities=15%  Similarity=0.091  Sum_probs=45.8

Q ss_pred             ccCCceEEEcC-CcchhHHHHHHHHHhhCCCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhhccccCCcEEEEEcc
Q psy11862          7 WYAGRSVLVTG-GTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKECPAQLSRLHIIEGD   85 (152)
Q Consensus         7 ~~~~~~ilItG-~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (152)
                      .-.+.+||-.| |+|+....+++.+-..|    .|+.+..++.   ..+......        .   .....++.++.+|
T Consensus        73 l~~g~~VLdiG~GtG~~s~~la~~~~~~g----~V~~id~~~~---~~~~a~~~~--------~---~~~~~n~~~~~~d  134 (213)
T d1dl5a1          73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKG----LVVSVEYSRK---ICEIAKRNV--------E---RLGIENVIFVCGD  134 (213)
T ss_dssp             CCTTCEEEEECCTTSHHHHHHHHHHCTTC----EEEEEESCHH---HHHHHHHHH--------H---HTTCCSEEEEESC
T ss_pred             ccccceEEEecCccchhHHHHHHHhCCCC----cEEEeecchh---hHHHhhhhH--------h---hhcccccccccCc
Confidence            34567888777 55555555555453443    7888876432   111111110        0   1113567777788


Q ss_pred             cCCCCCCCChhHHHHHhccccEEEeccccccchh
Q psy11862         86 ILQANLGIKDSDLLMLQEEVSVVFNGAASLKLEA  119 (152)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~  119 (152)
                      ..+...         .-...|.|+.+++..+.+.
T Consensus       135 ~~~~~~---------~~~~fD~I~~~~~~~~~p~  159 (213)
T d1dl5a1         135 GYYGVP---------EFSPYDVIFVTVGVDEVPE  159 (213)
T ss_dssp             GGGCCG---------GGCCEEEEEECSBBSCCCH
T ss_pred             hHHccc---------cccchhhhhhhccHHHhHH
Confidence            755321         1135799988887655443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.32  E-value=0.29  Score=32.04  Aligned_cols=32  Identities=22%  Similarity=0.277  Sum_probs=25.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |+|+|.| +|..|...+..|.+.|+   +|.++-++
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~---~V~vlE~~   32 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGT---DAVLLESS   32 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTC---CEEEECSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCC---CEEEEecC
Confidence            4688889 48999999999999997   45666554

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.01  E-value=1.4  Score=24.12  Aligned_cols=33  Identities=15%  Similarity=0.142  Sum_probs=23.1

Q ss_pred             ceEEEcCCcchhH-HHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         11 RSVLVTGGTGFMG-KVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        11 ~~ilItG~~G~iG-~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |++-+.| -|++| +++++.|.++|+   .|...++..
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~G~---~VsGSD~~~   35 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSNGN---DVYGSNIEE   35 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHTTC---EEEEECSSC
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhCCC---eEEEEeCCC
Confidence            4566666 55566 467888999997   667777654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.20  E-value=0.4  Score=31.79  Aligned_cols=32  Identities=28%  Similarity=0.284  Sum_probs=26.0

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .|+|.| +|..|..++..|.+.|.   .|.++.|.+
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~G~---~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKAGI---DNVILERQT   35 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTC---CEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCC---CEEEEeCCC
Confidence            588988 56999999999999987   566776653

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=86.06  E-value=0.6  Score=30.61  Aligned_cols=36  Identities=28%  Similarity=0.256  Sum_probs=30.0

Q ss_pred             cccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862          6 RWYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus         6 ~~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      +.+++++++|-| .|-+|+++++.|.+.|.   +++..+.
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Ga---kvv~~d~   70 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGA---KLVVTDV   70 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECS
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEeecc
Confidence            357899999988 89999999999999985   6666553

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.82  E-value=0.43  Score=31.89  Aligned_cols=33  Identities=18%  Similarity=0.414  Sum_probs=26.3

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      .|+|.| +|.+|..++..|.++|+  ..|.++.|..
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~--~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGW--NNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTC--CCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCC--CcEEEEeCCC
Confidence            478888 78999999999999986  2567777753

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.71  E-value=2.2  Score=25.02  Aligned_cols=40  Identities=23%  Similarity=0.210  Sum_probs=27.5

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL   50 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~   50 (152)
                      .++++.++|.|++ --+..-+..|.+..   .+|+++.|+....
T Consensus        31 ~frgk~V~VvGgG-dsA~e~A~~L~~~a---~~V~li~r~~~~r   70 (130)
T d1vdca2          31 IFRNKPLAVIGGG-DSAMEEANFLTKYG---SKVYIIHRRDAFR   70 (130)
T ss_dssp             GGTTSEEEEECCS-HHHHHHHHHHTTTS---SEEEEECSSSSCC
T ss_pred             HhCCCEEEEEcCc-hHHHHHHHHHhCCC---CcEEEEEeccccc
Confidence            5789999999974 44444455666553   5899998876543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.65  E-value=0.7  Score=31.41  Aligned_cols=34  Identities=21%  Similarity=0.223  Sum_probs=28.4

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      .+++++++|-| .|-+|+++++.|.+.|.   +|+.++
T Consensus        33 ~L~gktvaIqG-fGnVG~~~A~~L~e~Ga---kvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQG-FGNVGLHSMRYLHRFGA---KCVAVG   66 (293)
T ss_dssp             SSTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEE
Confidence            47889999988 79999999999999985   565554

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.52  E-value=2.2  Score=24.87  Aligned_cols=37  Identities=11%  Similarity=0.071  Sum_probs=27.8

Q ss_pred             CCceEEEcCCcc----------hhHHHHHHHHHhhCCCCcEEEEeecCCC
Q psy11862          9 AGRSVLVTGGTG----------FMGKVLLEKLLRSCPDIGKVYILCRAKR   48 (152)
Q Consensus         9 ~~~~ilItG~~G----------~iG~~l~~~l~~~g~~~~~v~~~~r~~~   48 (152)
                      +.++++|.|++.          +.+.+.+++|.+.|+   +++++..++.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~---~~IliN~NPe   49 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY---ETIMVNCNPE   49 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC---EEEEECCCTT
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC---eEEEEecChh
Confidence            457999999854          578899999999987   5566665443

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.41  E-value=0.84  Score=27.71  Aligned_cols=35  Identities=23%  Similarity=0.295  Sum_probs=27.3

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +++++|.| +|..|...+..+.+.|.  ..|+++.|+.
T Consensus        45 ~~kVvVIG-GGdtA~D~A~~a~r~GA--~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLG-AGDTAFDCATSALRCGA--RRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHTTC--SEEEEECSSC
T ss_pred             CCEEEEEC-CChhHHHHHHHHHHcCC--cceeEEEeCC
Confidence            45688877 78999999999999875  5677777754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.05  E-value=0.79  Score=30.47  Aligned_cols=34  Identities=24%  Similarity=0.221  Sum_probs=28.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      .+++++++|-| .|-+|+++++.|.+.|.   +|+.++
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Ga---kvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGA---KAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTC---EEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCC---eEEEEe
Confidence            57889999999 89999999999999985   565553

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=85.00  E-value=0.82  Score=24.57  Aligned_cols=34  Identities=21%  Similarity=0.177  Sum_probs=27.4

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +|+|.|.| +|-+|+-++.+-.+.|.   +++.++-++
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~---~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGI---AVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTE---EEEEECTTS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCC---EEEEEcCCC
Confidence            47899998 78999999999999986   667776543

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.71  E-value=0.54  Score=31.69  Aligned_cols=32  Identities=22%  Similarity=0.444  Sum_probs=25.5

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ..++|.| +|..|..+++.|.+.|+   +|.++.++
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g~---~V~iiEk~   33 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLNK---KVLVIEKR   33 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGTC---CEEEECSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCCC---cEEEEECC
Confidence            4678888 78999999999999986   45666554

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=84.71  E-value=0.76  Score=30.28  Aligned_cols=34  Identities=24%  Similarity=0.279  Sum_probs=28.9

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEee
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILC   44 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~   44 (152)
                      .+++++++|-| .|-+|+++++.|.+.|.   +|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Ga---kvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGA---KVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCC---eEEEee
Confidence            57899999987 99999999999999985   666554

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.47  E-value=0.54  Score=29.65  Aligned_cols=31  Identities=29%  Similarity=0.299  Sum_probs=25.3

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      |+|.| +|..|...+..|.+.|+   +|.++.+..
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~---~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGK---KVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCC---CEEEEcCCC
Confidence            67778 88999999999999996   567777654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.18  E-value=0.69  Score=31.35  Aligned_cols=36  Identities=17%  Similarity=0.082  Sum_probs=23.8

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      ..++++||-.|++.|+   +...+++.|.  .+|+++..++
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga--~~V~aid~s~   68 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGA--KKVLGVDQSE   68 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTC--SEEEEEESST
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCC--CEEEEEeCHH
Confidence            4578999999855432   3345556665  4788888653

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.05  E-value=0.56  Score=29.47  Aligned_cols=31  Identities=26%  Similarity=0.269  Sum_probs=23.3

Q ss_pred             ceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         11 RSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        11 ~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      |+|.|.| .|++|..++..+ +.|+   .|++++-+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~---~V~g~Din   31 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQN---EVTIVDIL   31 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTS---EEEEECSC
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCC---cEEEEECC
Confidence            5678886 899999998655 5676   67777743

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.93  E-value=0.95  Score=29.23  Aligned_cols=40  Identities=18%  Similarity=0.258  Sum_probs=31.8

Q ss_pred             cCCceEEEcCCcchhHHHHHHHHHhhC------------------CCCcEEEEeecCCC
Q psy11862          8 YAGRSVLVTGGTGFMGKVLLEKLLRSC------------------PDIGKVYILCRAKR   48 (152)
Q Consensus         8 ~~~~~ilItG~~G~iG~~l~~~l~~~g------------------~~~~~v~~~~r~~~   48 (152)
                      +.+++++|.| +|.++.-+++.+++.+                  .++..|+++.|+..
T Consensus        37 ~~gk~VvVIG-gGNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~   94 (225)
T d1cjca1          37 LSCDTAVILG-QGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP   94 (225)
T ss_dssp             TTSSEEEEES-CSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred             ccCceEEEEC-CchhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcCh
Confidence            4688999888 7899999999888742                  35689999998764

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=82.70  E-value=0.69  Score=30.38  Aligned_cols=30  Identities=27%  Similarity=0.301  Sum_probs=24.6

Q ss_pred             EEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         13 VLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        13 ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      ++|.| +|..|..++..|.++|+   +|.++.+.
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~---~V~viE~~   35 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGV---KTLLVDAF   35 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTC---CEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCC---cEEEEeCC
Confidence            67777 78999999999999986   56777664

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.50  E-value=2.6  Score=26.85  Aligned_cols=79  Identities=14%  Similarity=0.179  Sum_probs=42.4

Q ss_pred             CCceEEEcCCcchhHHH-HHHHH---HhhC--CCCcEEEEeecCCCCCCHHHHHHHHhcChhhhhhhhh--ccccCCcEE
Q psy11862          9 AGRSVLVTGGTGFMGKV-LLEKL---LRSC--PDIGKVYILCRAKRGLTPKARLAEFSKLPVFERLRKE--CPAQLSRLH   80 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~-l~~~l---~~~g--~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   80 (152)
                      +-.+++|.||||-+.+- |..+|   ...|  ++-.+|+.++|++...   +.+.+.....+.......  .......+.
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~---e~fr~~~~~~~~~~~~~~~~~~~f~~~~~   95 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTV---ADIRKQSEPFFKATPEEKLKLEDFFARNS   95 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSC---HHHHHHHSCCTTCCGGGHHHHHHHHTTEE
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCH---HHHHHHHHHHHhhchhhHHHHHHHHHhhc
Confidence            44589999999998743 22233   3333  2235899999986532   222222211111100000  011346788


Q ss_pred             EEEcccCCCC
Q psy11862         81 IIEGDILQAN   90 (152)
Q Consensus        81 ~~~~D~~~~~   90 (152)
                      ++.+|+++++
T Consensus        96 Y~~~d~~~~~  105 (203)
T d1qkia1          96 YVAGQYDDAA  105 (203)
T ss_dssp             CCBCCTTCHH
T ss_pred             cccCcCCChh
Confidence            9999998854

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=82.19  E-value=4.3  Score=27.97  Aligned_cols=37  Identities=11%  Similarity=0.132  Sum_probs=29.3

Q ss_pred             CCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCC
Q psy11862          9 AGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAK   47 (152)
Q Consensus         9 ~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~   47 (152)
                      +.+++.|.| +|..+..-++.+... .++.+|.+.+|++
T Consensus       127 da~~l~iiG-~G~QA~~~~~a~~~v-~~i~~V~v~~r~~  163 (340)
T d1x7da_         127 NARKMALIG-NGAQSEFQALAFHKH-LGIEEIVAYDTDP  163 (340)
T ss_dssp             TCCEEEEEC-CSTTHHHHHHHHHHH-SCCCEEEEECSSH
T ss_pred             CCceEEEEc-ccHHHHHHHHHHhhh-cceeeeEEEecCh
Confidence            346888888 778888888888776 4578999999864

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.03  E-value=1.3  Score=28.14  Aligned_cols=33  Identities=18%  Similarity=0.263  Sum_probs=26.4

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .++|.| +|++|.+++..|.+.+++. .|.++++.
T Consensus         6 ~~vIvG-~G~aG~~~A~~Lr~~~~~~-~I~li~~e   38 (213)
T d1m6ia1           6 PFLLIG-GGTAAFAAARSIRARDPGA-RVLIVSED   38 (213)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHHSTTC-EEEEEESS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhcCCCC-cEEEEeCC
Confidence            567777 6999999999999988764 67777764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.83  E-value=1.3  Score=29.08  Aligned_cols=32  Identities=22%  Similarity=0.256  Sum_probs=25.7

Q ss_pred             CceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeec
Q psy11862         10 GRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCR   45 (152)
Q Consensus        10 ~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r   45 (152)
                      -.+|+|.| +|.-|...+..|.+.|+   +|.++-+
T Consensus         5 ~~kViVIG-aG~aGL~aA~~L~~~G~---~V~VlEa   36 (449)
T d2dw4a2           5 TGKVIIIG-SGVSGLAAARQLQSFGM---DVTLLEA   36 (449)
T ss_dssp             CCEEEEEC-CBHHHHHHHHHHHHTTC---EEEEECS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhCCC---CEEEEeC
Confidence            45788988 78999999999999997   5566643

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=80.74  E-value=0.95  Score=28.61  Aligned_cols=32  Identities=25%  Similarity=0.349  Sum_probs=25.1

Q ss_pred             eEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862         12 SVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus        12 ~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      +|+|.| +|..|...+..|.+.|+  ..|.++.++
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~--~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGI--TDLLILEAT   33 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTC--CCEEEECSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCC--CcEEEEECC
Confidence            578888 78999999999999985  245666654

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=80.34  E-value=3  Score=24.07  Aligned_cols=39  Identities=23%  Similarity=0.244  Sum_probs=29.0

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRG   49 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~   49 (152)
                      .++++.++|.|+ |..+.+-+..|.+..   .+|+++.|++.-
T Consensus        24 ~~~~k~V~VvGg-GdsA~e~A~~L~~~a---~~V~li~r~~~~   62 (126)
T d1trba2          24 FYRNQKVAVIGG-GNTAVEEALYLSNIA---SEVHLIHRRDGF   62 (126)
T ss_dssp             GGTTSEEEEECS-SHHHHHHHHHHTTTS---SEEEEECSSSSC
T ss_pred             HhCCCEEEEECC-CHHHHHHHHHHhhcC---CcEEEEeecccc
Confidence            468999999996 666666677776654   589999987643

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.29  E-value=0.54  Score=34.71  Aligned_cols=37  Identities=16%  Similarity=0.148  Sum_probs=29.6

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRA   46 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~   46 (152)
                      .+...+|+|.|+ |++|.++++.|+..|.  ..+.+++.+
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GV--g~itivD~d   58 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGI--GSFTIIDGN   58 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTC--SEEEEECCS
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcC--CEEEEEcCC
Confidence            455679999995 7899999999998864  678877654

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=80.14  E-value=3.7  Score=23.68  Aligned_cols=40  Identities=25%  Similarity=0.190  Sum_probs=27.1

Q ss_pred             ccCCceEEEcCCcchhHHHHHHHHHhhCCCCcEEEEeecCCCCC
Q psy11862          7 WYAGRSVLVTGGTGFMGKVLLEKLLRSCPDIGKVYILCRAKRGL   50 (152)
Q Consensus         7 ~~~~~~ilItG~~G~iG~~l~~~l~~~g~~~~~v~~~~r~~~~~   50 (152)
                      .+++++++|.|++ .....-+..|.+..   .+|+++.|.+...
T Consensus        27 ~~~gk~V~VvGgG-~sA~~~A~~L~~~a---~~V~li~r~~~~~   66 (126)
T d1fl2a2          27 LFKGKRVAVIGGG-NSGVEAAIDLAGIV---EHVTLLEFAPEMK   66 (126)
T ss_dssp             GGBTCEEEEECCS-HHHHHHHHHHHTTB---SEEEEECSSSSCC
T ss_pred             hcCCceEEEEeCC-HHHHHHHHhhhccC---CceEEEecccccc
Confidence            4689999999964 44444455666653   5889998876443