Psyllid ID: psy12011

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
Protein Sequence
MSSQNLQVHFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC
Secondary Structure (PSIPRED)
cccccccEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEccccccEEEcccccccccccEccccccccEEEHHHHHHHHHHHcccccccccccccHHHHcHHHHHHHHHHHcccHccccccc
Coil and Loop (DISEMBL)
mssqnlqvhfcglfpesfltwsnlkpnlngmfacdlcdkeyKYKRNLyshkkdecgqeprfqcpqcsyrtkrkgnlksHLAIRhecylddsanc
Flexible Loop (DISEMBL)
MSSQNLQVHFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYShkkdecgqeprfqcpqcsyrtkrkgnlkshlairhecylddsanc
Low Complexity Region (SEG)
MSSQNLQVHFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC
Disordered region (IsUnstruct)
*****LQVHFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ*PRFQCPQCSYRTKRKGNLKSHLAIRHECYL******
Disordered Region (DISOPRED)
*****LQ*HFCGLF******************ACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY*DDSANC
Disordered Region (DISEMBL)
MSSQNLQVHFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC
Disordered Region (DISPRO)
****NLQVHFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLD*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSSQNLQVHFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	94	2.2.26 [Sep-21-2011]
Q7KQZ4	787	Longitudinals lacking pro	yes	N/A	0.553	0.066	0.461	9e-10
P42283	891	Longitudinals lacking pro	no	N/A	0.574	0.060	0.418	3e-08
Q867Z4	970	Longitudinals lacking pro	no	N/A	0.776	0.075	0.381	6e-08
Q9V5M3	878	Longitudinals lacking pro	no	N/A	0.542	0.058	0.423	2e-06
Q9V5M6	963	Longitudinals lacking pro	no	N/A	0.521	0.050	0.44	3e-06
Q9P243	1243	Zinc finger protein ZFAT	yes	N/A	0.680	0.051	0.369	7e-06
Q6IV72	752	Zinc finger protein 425 O	no	N/A	0.510	0.063	0.469	8e-05
P07247	502	Protein krueppel OS=Droso	no	N/A	0.595	0.111	0.333	0.0001
Q7TS63	1237	Zinc finger protein ZFAT	yes	N/A	0.680	0.051	0.353	0.0001
Q7TSH3	1157	Zinc finger protein 516 O	no	N/A	0.5	0.040	0.354	0.0001

>sp|Q7KQZ4|LOLA3_DROME Longitudinals lacking protein, isoforms A/B/D/L OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 36/52 (69%)

Query: 34  CDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE 85
           C +C + YK K +L +H+K ECG+EP+FQCP C YR K+K ++  H+   H+
Sbjct: 687 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 738

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.
Drosophila melanogaster (taxid: 7227)

>sp|P42283|LOLA1_DROME Longitudinals lacking protein, isoform G OS=Drosophila melanogaster GN=lola PE=1 SV=2

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 31  MFACDLCDKEYKYKRNLYSHKKDECG-QEPRFQCPQCSYRTKRKGNLKSHLAIRH 84
           ++ C  C K+Y++K  L  H+  ECG +EP  QCP C Y++K++GNL  H+   H
Sbjct: 790 VYECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGVHVRKHH 844

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 12  GLFPESFLTWSNLKP--NLNGMFACDLCDKEYKYKRNLYSHKKDECG-QEPRFQCPQCSY 68
           G+  E  L+ S+L P  +    + C  C K+Y++K  L  H+  ECG +EP   CP CSY
Sbjct: 881 GMTYELSLSDSSLGPCDDPESRYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSY 940

Query: 69  RTKRKGNLKSHLAIRH 84
           + K++GNL  H+   H
Sbjct: 941 KAKQRGNLGVHVRKHH 956

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q9V5M3|LOLA6_DROME Longitudinals lacking protein, isoforms N/O/W/X/Y OS=Drosophila melanogaster GN=lola PE=1 SV=3

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 20  TWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTK 71
           T   L+P+ +  +AC++C K YK K +L  HK  ECG EP  +CP C ++ K
Sbjct: 698 TTMTLQPD-DCKYACNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCK 748

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q9V5M6|LOLA5_DROME Longitudinals lacking protein, isoforms J/P/Q/S/Z OS=Drosophila melanogaster GN=lola PE=1 SV=4

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 32  FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ-CSYRTKRKGNLKSHL 80
           + C  C++ YK+K +L  H K+ECG  PR+ C + C Y T    NLK HL
Sbjct: 849 WVCRNCNRTYKWKNSLKCHLKNECGLPPRYFCSKMCGYATNVHSNLKRHL 898

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q9P243|ZFAT_HUMAN Zinc finger protein ZFAT OS=Homo sapiens GN=ZFAT PE=1 SV=2

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 16  ESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGN 75
           E  +  S L P    +F C+ C+K +K+K +L +H +    ++P ++CPQCSY +  K N
Sbjct: 255 EQPMKSSRLGPTQLKIFTCEYCNKVFKFKHSLQAHLRIHTNEKP-YKCPQCSYASAIKAN 313

Query: 76  LKSHL 80
           L  HL
Sbjct: 314 LNVHL 318

May be involved in transcriptional regulation. Overexpression causes down-regulation of a number of genes involved in the immune response. Some genes are also up-regulated.

Homo sapiens (taxid: 9606)

>sp|Q6IV72|ZN425_HUMAN Zinc finger protein 425 OS=Homo sapiens GN=ZNF425 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 32  FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHL 80
           FAC  CDK Y ++  L  H +   G++P +QCP+C    + KGNLKSHL
Sbjct: 582 FACGECDKTYTHQSQLTEHLRLHSGEKP-YQCPECEKTFRLKGNLKSHL 629

Acts as a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|P07247|KRUP_DROME Protein krueppel OS=Drosophila melanogaster GN=Kr PE=1 SV=2

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 26  PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAI 82
           P+ +  F C +C + + YK  L +H++   G++P F+CP+C  R  R  +LK+H+ +
Sbjct: 216 PSRDKSFTCKICSRSFGYKHVLQNHERTHTGEKP-FECPECHKRFTRDHHLKTHMRL 271

Krueppel is a gap class segmentation protein. It is involved in the segmentation of the embryo and in the differentiation of the Malpighian tubules.

Drosophila melanogaster (taxid: 7227)

>sp|Q7TS63|ZFAT_MOUSE Zinc finger protein ZFAT OS=Mus musculus GN=Zfat PE=1 SV=2

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 16  ESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGN 75
           E  +  S L P    +F C+ C+K +K+K +L +H +    ++P ++C QCSY +  K N
Sbjct: 255 EQPMKSSRLGPTQLKIFTCEYCNKVFKFKHSLQAHLRIHTNEKP-YKCSQCSYASAIKAN 313

Query: 76  LKSHL 80
           L  HL
Sbjct: 314 LNVHL 318

May be involved in transcriptional regulation. Overexpression causes down-regulation of a number of genes involved in the immune response. Some genes are also up-regulated.

Mus musculus (taxid: 10090)

>sp|Q7TSH3|ZN516_MOUSE Zinc finger protein 516 OS=Mus musculus GN=Znf516 PE=2 SV=1

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 33 ACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHL 80
          +C +C K + ++ +L  H +   G++P ++CP C +R  +KGNLK H+
Sbjct: 35 SCCICGKSFPFQSSLSQHMRKHTGEKP-YKCPYCDHRASQKGNLKIHI 81

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
157121098	731	lola [Aedes aegypti] gi|108874717|gb|EAT	0.595	0.076	0.482	4e-09
24652482	787	longitudinals lacking, isoform C [Drosop	0.553	0.066	0.461	4e-08
29539411	786	Lola protein isoform L [Drosophila melan	0.553	0.066	0.461	4e-08
194757982	337	GF11097 [Drosophila ananassae] gi|190622	0.553	0.154	0.461	6e-08
332026407	171	Longitudinals lacking protein, isoforms	0.670	0.368	0.468	6e-08
195582220	335	GD25971 [Drosophila simulans] gi|1941929	0.553	0.155	0.461	7e-08
195333169	335	GM20512 [Drosophila sechellia] gi|194125	0.553	0.155	0.461	7e-08
45552567	771	longitudinals lacking, isoform W [Drosop	0.680	0.083	0.384	7e-08
328718738	169	PREDICTED: zinc finger protein 786-like	0.574	0.319	0.5	8e-08
194884229	346	GG22734 [Drosophila erecta] gi|190659385	0.553	0.150	0.461	1e-07

>gi|157121098|ref|XP_001659824.1| lola [Aedes aegypti] gi|108874717|gb|EAT38942.1| AAEL009212-PC [Aedes aegypti]

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 38/56 (67%)

Query: 30  GMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE 85
           G FAC  C + YK K +L +H+K ECG+EP+FQCP C YR K+K ++  H+   H+
Sbjct: 648 GGFACPDCGRVYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHK 703

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24652482|ref|NP_724946.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|78711864|ref|NP_724949.2| longitudinals lacking, isoform B [Drosophila melanogaster] gi|73920870|sp|Q7KQZ4.1|LOLA3_DROME RecName: Full=Longitudinals lacking protein, isoforms A/B/D/L gi|7303724|gb|AAF58773.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|71911713|gb|AAF58776.3| longitudinals lacking, isoform B [Drosophila melanogaster]

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 36/52 (69%)

Query: 34  CDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE 85
           C +C + YK K +L +H+K ECG+EP+FQCP C YR K+K ++  H+   H+
Sbjct: 687 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 738

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|29539411|dbj|BAC67588.1| Lola protein isoform L [Drosophila melanogaster] gi|29539451|dbj|BAC67608.1| Lola protein isoform L [Drosophila melanogaster] gi|29539491|dbj|BAC67628.1| Lola protein isoform L [Drosophila melanogaster] gi|29539531|dbj|BAC67648.1| Lola protein isoform L [Drosophila melanogaster]

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 36/52 (69%)

Query: 34  CDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE 85
           C +C + YK K +L +H+K ECG+EP+FQCP C YR K+K ++  H+   H+
Sbjct: 686 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 737

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194757982|ref|XP_001961241.1| GF11097 [Drosophila ananassae] gi|190622539|gb|EDV38063.1| GF11097 [Drosophila ananassae]

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 36/52 (69%)

Query: 34  CDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE 85
           C +C + YK K +L +H+K ECG+EP+FQCP C YR K+K ++  H+   H+
Sbjct: 227 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 278

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332026407|gb|EGI66536.1| Longitudinals lacking protein, isoforms A/B/D/L [Acromyrmex echinatior]

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 21  WSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHL 80
           W + K  L G   C  C K YK +  L+ H K ECG+ PRFQCP C YRTK++ N+ SH+
Sbjct: 95  WKSYKQPLQG-HVCKDCGKIYKQRNALWRHFKYECGKSPRFQCPYCRYRTKQRSNMSSHI 153

Query: 81  AIRH 84
             +H
Sbjct: 154 KHKH 157

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195582220|ref|XP_002080926.1| GD25971 [Drosophila simulans] gi|194192935|gb|EDX06511.1| GD25971 [Drosophila simulans]

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 36/52 (69%)

Query: 34  CDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE 85
           C +C + YK K +L +H+K ECG+EP+FQCP C YR K+K ++  H+   H+
Sbjct: 235 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 286

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195333169|ref|XP_002033264.1| GM20512 [Drosophila sechellia] gi|194125234|gb|EDW47277.1| GM20512 [Drosophila sechellia]

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 36/52 (69%)

Query: 34  CDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE 85
           C +C + YK K +L +H+K ECG+EP+FQCP C YR K+K ++  H+   H+
Sbjct: 235 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 286

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|45552567|ref|NP_995806.1| longitudinals lacking, isoform W [Drosophila melanogaster] gi|29539421|dbj|BAC67593.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539461|dbj|BAC67613.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539501|dbj|BAC67633.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539541|dbj|BAC67653.1| Lola protein isoform Q [Drosophila melanogaster] gi|45445597|gb|AAS64876.1| longitudinals lacking, isoform W [Drosophila melanogaster]

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 20  TWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSH 79
           T   L+P+ +  +AC++C K YK K +L  HK  ECG EP  +CP C ++ K + +L+ H
Sbjct: 698 TTMTLQPD-DCKYACNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCKYRSDLRKH 756

Query: 80  LAIRH 84
           +  +H
Sbjct: 757 MNQKH 761

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328718738|ref|XP_003246562.1| PREDICTED: zinc finger protein 786-like [Acyrthosiphon pisum]

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 37/54 (68%)

Query: 31  MFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRH 84
           +F C  CDK Y+ K +L  HK+ ECG+EP FQCP C  +T +KGNL+ H+  +H
Sbjct: 106 IFQCPDCDKRYRSKTSLSLHKRLECGKEPAFQCPYCPLKTHQKGNLQVHIKKKH 159

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194884229|ref|XP_001976198.1| GG22734 [Drosophila erecta] gi|190659385|gb|EDV56598.1| GG22734 [Drosophila erecta]

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 36/52 (69%)

Query: 34  CDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE 85
           C +C + YK K +L +H+K ECG+EP+FQCP C YR K+K ++  H+   H+
Sbjct: 246 CPVCGRIYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 297

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
UNIPROTKB|D4A4M7	474	Zfp64 "Protein Zfp64" [Rattus	0.553	0.109	0.415	4.1e-08
FB|FBgn0005630	970	lola "longitudinals lacking" [	0.776	0.075	0.381	5.3e-08
WB|WBGene00003087	365	lsy-2 [Caenorhabditis elegans	0.765	0.197	0.333	5.4e-08
UNIPROTKB|F1NMT2	689	ZFP64 "Uncharacterized protein	0.638	0.087	0.333	8.9e-08
RGD|1307948	678	Zfp64 "zinc finger protein 64"	0.553	0.076	0.415	1.1e-07
ZFIN|ZDB-GENE-030131-6298	542	si:ch211-241e1.5 "si:ch211-241	0.574	0.099	0.464	1.4e-07
UNIPROTKB|E2R5D8	682	ZFP64 "Uncharacterized protein	0.553	0.076	0.415	1.4e-07
UNIPROTKB|F1M4S4	154	F1M4S4 "Uncharacterized protei	0.5	0.305	0.333	2e-07
UNIPROTKB|Q5JWM1	679	ZFP64 "Zinc finger protein 64	0.553	0.076	0.415	2.2e-07
UNIPROTKB|A5GFU9	680	ZFP64 "Zinc finger protein 64	0.553	0.076	0.415	2.2e-07

UNIPROTKB|D4A4M7 Zfp64 "Protein Zfp64" [Rattus norvegicus (taxid:10116)]

 Score = 119 (46.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query:    32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRH 84
             F C LC  ++K   +L  H +   G++P F+C  C+ R   KGNLKSH+ I+H
Sbjct:   259 FQCWLCSAKFKISSDLKRHMRVHSGEKP-FKCDFCNVRCTMKGNLKSHIRIKH 310

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0005630 lola "longitudinals lacking" [Drosophila melanogaster (taxid:7227)]

 Score = 137 (53.3 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 29/76 (38%), Positives = 43/76 (56%)

Query:    12 GLFPESFLTWSNLKP--NLNGMFACDLCDKEYKYKRNLYSHKKDECG-QEPRFQCPQCSY 68
             G+  E  L+ S+L P  +    + C  C K+Y++K  L  H+  ECG +EP   CP CSY
Sbjct:   881 GMTYELSLSDSSLGPCDDPESRYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSY 940

Query:    69 RTKRKGNLKSHLAIRH 84
             + K++GNL  H+   H
Sbjct:   941 KAKQRGNLGVHVRKHH 956

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0007411 "axon guidance" evidence=IGI;NAS;IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0007409 "axonogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS

GO:0016199 "axon midline choice point recognition" evidence=IGI;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0019730 "antimicrobial humoral response" evidence=IMP

GO:0045476 "nurse cell apoptotic process" evidence=IMP

GO:0045467 "R7 cell development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0007464 "R3/R4 cell fate commitment" evidence=IMP

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

WB|WBGene00003087 lsy-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 131 (51.2 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 26/78 (33%), Positives = 40/78 (51%)

Query:     8 VHFCGLFPESFLTWSNLKPNL-----NGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQ 62
             VH C +  + F+++  L+ +         F CD+C K +++K NL+ H+    G  P   
Sbjct:    77 VHQCNVCNKIFVSYKGLQQHAVIHTDQKPFRCDICSKSFRFKSNLFEHRSVHTGFTPH-A 135

Query:    63 CPQCSYRTKRKGNLKSHL 80
             CP C    + KGNLK HL
Sbjct:   136 CPYCGKTCRLKGNLKKHL 153

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

UNIPROTKB|F1NMT2 ZFP64 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 121 (47.7 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
 Identities = 21/63 (33%), Positives = 36/63 (57%)

Query:    32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS 91
             F C +C  ++K   +L  H +   G++P ++C  C  R   KGNLKSH+ I+H   ++++
Sbjct:   261 FQCQMCPAKFKINSDLKRHMRVHSGEKP-YKCEYCEVRCAMKGNLKSHIRIKHS--MENT 317

Query:    92 ANC 94
               C
Sbjct:   318 LKC 320

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1307948 Zfp64 "zinc finger protein 64" [Rattus norvegicus (taxid:10116)]

 Score = 119 (46.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query:    32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRH 84
             F C LC  ++K   +L  H +   G++P F+C  C+ R   KGNLKSH+ I+H
Sbjct:   259 FQCWLCSAKFKISSDLKRHMRVHSGEKP-FKCDFCNVRCTMKGNLKSHIRIKH 310

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-030131-6298 si:ch211-241e1.5 "si:ch211-241e1.5" [Danio rerio (taxid:7955)]

 Score = 130 (50.8 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 26/56 (46%), Positives = 31/56 (55%)

Query:    32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRH-EC 86
             F C  C K +  K NLYSH K   G+ P F+C QC     +KGNLK H+ I   EC
Sbjct:   122 FTCKQCGKRFNQKGNLYSHMKIHSGESP-FRCQQCGKSFNQKGNLKLHMRIHTGEC 176

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E2R5D8 ZFP64 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 119 (46.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query:    32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRH 84
             F C LC  ++K   +L  H +   G++P F+C  C+ R   KGNLKSH+ I+H
Sbjct:   259 FQCWLCSAKFKISSDLKRHMRVHSGEKP-FKCEFCNVRCTMKGNLKSHIRIKH 310

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1M4S4 F1M4S4 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 98 (39.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
 Identities = 16/48 (33%), Positives = 27/48 (56%)

Query:    32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSH 79
             + C+ C K +    NL +HK+   G++P ++C QC     R  NL++H
Sbjct:    74 YECNQCGKAFAQSNNLQNHKRTHTGEKP-YECNQCGKAFARSNNLQNH 120

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5JWM1 ZFP64 "Zinc finger protein 64 homolog, isoforms 1 and 2" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query:    32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRH 84
             F C LC  ++K   +L  H +   G++P F+C  C+ R   KGNLKSH+ I+H
Sbjct:   257 FQCWLCSAKFKISSDLKRHMRVHSGEKP-FKCEFCNVRCTMKGNLKSHIRIKH 308

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|A5GFU9 ZFP64 "Zinc finger protein 64 homolog (Mouse)" [Sus scrofa (taxid:9823)]

 Score = 119 (46.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query:    32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRH 84
             F C LC  ++K   +L  H +   G++P F+C  C+ R   KGNLKSH+ I+H
Sbjct:   259 FQCWLCSAKFKISSDLKRHMRVHSGEKP-FKCEFCNVRCTMKGNLKSHIRIKH 310

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	94
KOG2462|consensus	279		99.93
KOG2462|consensus	279		99.82
KOG3623|consensus	1007		99.69
KOG3576|consensus	267		99.63
KOG3623|consensus	1007		99.56
KOG3576|consensus	267		99.44
PHA00733	128	hypothetical protein	99.32
KOG3608|consensus	467		99.28
KOG1074|consensus	958		99.17
KOG3608|consensus	467		99.09
KOG1074|consensus	958		99.09
PHA02768	55	hypothetical protein; Provisional	99.08
PHA02768	55	hypothetical protein; Provisional	99.06
PHA00616	44	hypothetical protein	98.96
PLN03086	567	PRLI-interacting factor K; Provisional	98.88
PLN03086	567	PRLI-interacting factor K; Provisional	98.78
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.77
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.76
PHA00733	128	hypothetical protein	98.72
PHA00732	79	hypothetical protein	98.58
PHA00616	44	hypothetical protein	98.56
KOG3993|consensus	500		98.42
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.38
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.22
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.21
PHA00732	79	hypothetical protein	98.09
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.08
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	98.07
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.0
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.82
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.66
smart00355	26	ZnF_C2H2 zinc finger.	97.66
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.6
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.58
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.48
PRK04860	160	hypothetical protein; Provisional	97.44
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.22
smart00355	26	ZnF_C2H2 zinc finger.	97.18
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.14
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.11
KOG3993|consensus	500		97.07
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.9
PRK04860	160	hypothetical protein; Provisional	96.73
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.72
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.9
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.87
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	95.13
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	95.01
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.93
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	94.6
COG5048	467	FOG: Zn-finger [General function prediction only]	94.58
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	94.28
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	93.98
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	93.02
COG1592	166	Rubrerythrin [Energy production and conversion]	92.51
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.34
smart00531	147	TFIIE Transcription initiation factor IIE.	92.3
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	92.12
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	91.69
KOG1146|consensus	1406		91.68
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	91.65
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	91.33
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	90.69
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	90.15
KOG2186|consensus	276		90.08
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	89.91
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	89.77
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	89.74
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	89.35
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	89.22
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	89.08
PRK06266	178	transcription initiation factor E subunit alpha; V	88.99
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	88.83
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	88.16
COG4049	65	Uncharacterized protein containing archaeal-type C	88.14
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	87.92
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	87.55
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	87.49
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	85.84
PHA00626	59	hypothetical protein	85.76
KOG2893|consensus	341		85.5
PF05191	36	ADK_lid: Adenylate kinase, active site lid; InterP	85.03
KOG2893|consensus	341		84.98
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	84.34
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	84.04
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	83.92
PF07754	24	DUF1610: Domain of unknown function (DUF1610); Int	81.18

>KOG2462|consensus

Probab=99.93  E-value=9.4e-27  Score=131.56  Aligned_cols=88  Identities=20%  Similarity=0.503  Sum_probs=79.6

Q ss_pred             CceeecCCCCccccchhccC-C--CCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHH
Q psy12011          6 LQVHFCGLFPESFLTWSNLK-P--NLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAI   82 (94)
Q Consensus         6 ~~~~~c~~c~~~~~~~~~l~-~--~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~   82 (94)
                      .+.+.|++|||.|...-.|+ |  +..-+++|.+||+.|..+..|+.|+++|+||+| |.|..|+++|.-++||+.|++|
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKP-F~C~hC~kAFADRSNLRAHmQT  237 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTHTGEKP-FSCPHCGKAFADRSNLRAHMQT  237 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccccccCCCC-ccCCcccchhcchHHHHHHHHh
Confidence            56677888888887777776 2  444689999999999999999999999999999 9999999999999999999999


Q ss_pred             hcCcccCCCCCC
Q psy12011         83 RHECYLDDSANC   94 (94)
Q Consensus        83 ~~~~~~~~c~~C   94 (94)
                      |.+.|.|+|..|
T Consensus       238 HS~~K~~qC~~C  249 (279)
T KOG2462|consen  238 HSDVKKHQCPRC  249 (279)
T ss_pred             hcCCccccCcch
Confidence            999999999987

>KOG2462|consensus

Probab=99.82  E-value=6.2e-21  Score=108.22  Aligned_cols=78  Identities=23%  Similarity=0.384  Sum_probs=73.2

Q ss_pred             CCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHH
Q psy12011          4 QNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKS   78 (94)
Q Consensus         4 ~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~   78 (94)
                      +..-+++|..|||.|...+-|+     |+|||||.|..|++.|.+.++|..||++|.+.++ |+|..|+|.|...+-|.+
T Consensus       183 TH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~-~qC~~C~KsFsl~SyLnK  261 (279)
T KOG2462|consen  183 THTLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKK-HQCPRCGKSFALKSYLNK  261 (279)
T ss_pred             ccCCCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcc-ccCcchhhHHHHHHHHHH
Confidence            4456899999999999999887     8999999999999999999999999999999998 999999999999999999


Q ss_pred             HHHH
Q psy12011         79 HLAI   82 (94)
Q Consensus        79 h~~~   82 (94)
                      |...
T Consensus       262 H~ES  265 (279)
T KOG2462|consen  262 HSES  265 (279)
T ss_pred             hhhh
Confidence            9864

>KOG3623|consensus

Probab=99.69  E-value=3.3e-18  Score=107.65  Aligned_cols=78  Identities=27%  Similarity=0.533  Sum_probs=69.1

Q ss_pred             CCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHH
Q psy12011          3 SQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLK   77 (94)
Q Consensus         3 ~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~   77 (94)
                      .+...+|.|..|+|.|...+.|.     |+|.+||+|.+|.+.|..+..|..|.+.|.|++| |+|..|++.|..+++..
T Consensus       889 kte~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKP-fQCdKClKRFSHSGSYS  967 (1007)
T KOG3623|consen  889 KTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKP-FQCDKCLKRFSHSGSYS  967 (1007)
T ss_pred             cCccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCc-chhhhhhhhcccccchH
Confidence            45667899999999998877776     8999999999999999999999999999999888 99999999999999888


Q ss_pred             HHHH
Q psy12011         78 SHLA   81 (94)
Q Consensus        78 ~h~~   81 (94)
                      .||-
T Consensus       968 QHMN  971 (1007)
T KOG3623|consen  968 QHMN  971 (1007)
T ss_pred             hhhc
Confidence            8875

>KOG3576|consensus

Probab=99.63  E-value=4.1e-17  Score=89.67  Aligned_cols=90  Identities=21%  Similarity=0.404  Sum_probs=76.8

Q ss_pred             CCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHH
Q psy12011          4 QNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKS   78 (94)
Q Consensus         4 ~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~   78 (94)
                      .+...|.|..|+|.|....-|.     |...+-+-|..||+.|.+.-+|.+|+++|+|.+| |+|..|+++|+..-+|..
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrp-ykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRP-YKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccc-cchhhhhHHHHhhccHHH
Confidence            3456799999999998777665     6777889999999999999999999999999887 999999999999999999


Q ss_pred             HHHHhcC-----------cccCCCCCC
Q psy12011         79 HLAIRHE-----------CYLDDSANC   94 (94)
Q Consensus        79 h~~~~~~-----------~~~~~c~~C   94 (94)
                      |++.-|+           .|.|.|..|
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedc  218 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDC  218 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeeccc
Confidence            9986554           455666655

>KOG3623|consensus

Probab=99.56  E-value=1e-15  Score=96.70  Aligned_cols=67  Identities=33%  Similarity=0.635  Sum_probs=63.8

Q ss_pred             CCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         27 NLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        27 ~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      +.+.+|.|+.|++.|.-.+.|.+|..-|.|.+| |+|.+|.++|..+..|..|+|.|.|||||+|.+|
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRP-yqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKC  956 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSGQRP-YQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKC  956 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcCCCC-cccchhhHhhhhhhhhhhhhhhccCCCcchhhhh
Confidence            556789999999999999999999999999888 9999999999999999999999999999999988

>KOG3576|consensus

Probab=99.44  E-value=1.1e-14  Score=80.16  Aligned_cols=65  Identities=22%  Similarity=0.383  Sum_probs=61.6

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      ...+.|.+|++.|.....|.+|++.|...+. +.|.-||+.|.-.-+|++|+++|+|..||+|..|
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr-~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c  179 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKR-HLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLC  179 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHH-HHHhhccCcccchhhhhhhhccccCccccchhhh
Confidence            4568999999999999999999999999888 9999999999999999999999999999999887

>PHA00733 hypothetical protein

Probab=99.32  E-value=1.1e-12  Score=68.66  Aligned_cols=78  Identities=14%  Similarity=0.264  Sum_probs=65.2

Q ss_pred             CceeecCCCCccccchhccC----------CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhH
Q psy12011          6 LQVHFCGLFPESFLTWSNLK----------PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGN   75 (94)
Q Consensus         6 ~~~~~c~~c~~~~~~~~~l~----------~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~   75 (94)
                      .+++.|..|.+.|.....|.          +.++++|.|..|++.|.....|..|++.+  ..+ +.|.+|++.|.....
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~-~~C~~CgK~F~~~~s  114 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHS-KVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcC-ccCCCCCCccCCHHH
Confidence            46678888888777666555          35578999999999999999999999876  345 999999999999999


Q ss_pred             HHHHHHHhcCc
Q psy12011         76 LKSHLAIRHEC   86 (94)
Q Consensus        76 l~~h~~~~~~~   86 (94)
                      |..|+...|+.
T Consensus       115 L~~H~~~~h~~  125 (128)
T PHA00733        115 TLDHVCKKHNI  125 (128)
T ss_pred             HHHHHHHhcCc
Confidence            99999987764

>KOG3608|consensus

Probab=99.28  E-value=2.1e-12  Score=76.44  Aligned_cols=89  Identities=24%  Similarity=0.396  Sum_probs=48.5

Q ss_pred             CCCCCceeecCCCCccccchhccC-C------CCCCcc--------------------------ccccchhhccChHHHH
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-P------NLNGMF--------------------------ACDLCDKEYKYKRNLY   48 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-~------~~~k~~--------------------------~c~~c~~~~~~~~~l~   48 (94)
                      .|+++|.-.|+.||.-|.+...|- |      ....+|                          +|+.|+-+....+.|.
T Consensus       201 ~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~  280 (467)
T KOG3608|consen  201 THSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLT  280 (467)
T ss_pred             hcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHH
Confidence            467777778888887777666543 1      112244                          4444444444555555


Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      .|++..+.+..||+|..|++.+...+.|.+|..+|. +..|.|
T Consensus       281 ~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C  322 (467)
T KOG3608|consen  281 THIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQC  322 (467)
T ss_pred             HHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceec
Confidence            555442222222666666666666666666655554 445555

>KOG1074|consensus

Probab=99.17  E-value=6.1e-12  Score=80.87  Aligned_cols=58  Identities=34%  Similarity=0.658  Sum_probs=54.0

Q ss_pred             ccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccC
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLD   89 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~   89 (94)
                      .++|..|.+.|...+.|+.|++.|+|++| |+|++||..|..+++|+.|...|+...|+
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTGERP-fqCnvCG~~FSTkGNLKvH~~rH~e~~p~  410 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTGERP-FQCNVCGNRFSTKGNLKVHFQRHREKYPH  410 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCCCCC-eeecccccccccccceeeeeeeccccCCc
Confidence            46899999999999999999999999998 99999999999999999999998877653

>KOG3608|consensus

Probab=99.09  E-value=1.5e-11  Score=72.88  Aligned_cols=85  Identities=22%  Similarity=0.413  Sum_probs=71.0

Q ss_pred             eeecCCCCccccchhccC------CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC--CcccccchhHHHHH
Q psy12011          8 VHFCGLFPESFLTWSNLK------PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ--CSYRTKRKGNLKSH   79 (94)
Q Consensus         8 ~~~c~~c~~~~~~~~~l~------~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h   79 (94)
                      -|.|+.|+.+....+.|.      |..+||++|+.|+..+...++|.+|...|. +.. |+|..  |...|.....+++|
T Consensus       263 ~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~-y~C~h~~C~~s~r~~~q~~~H  340 (467)
T KOG3608|consen  263 CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTV-YQCEHPDCHYSVRTYTQMRRH  340 (467)
T ss_pred             cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccc-eecCCCCCcHHHHHHHHHHHH
Confidence            367888887777777665      788999999999999999999999999887 354 99987  88889999999999


Q ss_pred             HHHhc---CcccCCCCCC
Q psy12011         80 LAIRH---ECYLDDSANC   94 (94)
Q Consensus        80 ~~~~~---~~~~~~c~~C   94 (94)
                      .+.++   ...+|.|..|
T Consensus       341 ~~evhEg~np~~Y~CH~C  358 (467)
T KOG3608|consen  341 FLEVHEGNNPILYACHCC  358 (467)
T ss_pred             HHHhccCCCCCceeeecc
Confidence            99877   3456888766

>KOG1074|consensus

Probab=99.09  E-value=3.2e-11  Score=77.73  Aligned_cols=56  Identities=27%  Similarity=0.557  Sum_probs=51.1

Q ss_pred             CccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      .|.+|.+|.+...-.+.|+.|.++|+|++| |+|.+||++|+.++||+.|+..|-..
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERP-FkCKiCgRAFtTkGNLkaH~~vHka~  659 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERP-FKCKICGRAFTTKGNLKAHMSVHKAK  659 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCc-cccccccchhccccchhhcccccccC
Confidence            478999999999999999999999999888 99999999999999999999887543

>PHA02768 hypothetical protein; Provisional

Probab=99.08  E-value=3.7e-11  Score=53.52  Aligned_cols=43  Identities=16%  Similarity=0.510  Sum_probs=35.1

Q ss_pred             ccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHH
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNL   76 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l   76 (94)
                      .|+|++||+.|...+.|..|++.|.  ++ ++|..|++.|...++|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~-~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TN-LKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Cc-ccCCcccceeccccee
Confidence            4688888888888888888988887  45 8888888888876655

>PHA02768 hypothetical protein; Provisional

Probab=99.06  E-value=1.2e-10  Score=51.85  Aligned_cols=32  Identities=22%  Similarity=0.513  Sum_probs=29.2

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      |.|+.||+.|...++|..|+++|+  ++++|.+|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C   37 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNC   37 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcc
Confidence            899999999999999999999999  67777766

>PHA00616 hypothetical protein

Probab=98.96  E-value=3.4e-10  Score=48.21  Aligned_cols=33  Identities=21%  Similarity=0.290  Sum_probs=24.7

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcCcccCCCC
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      ||+|..||+.|...++|..|++.||+++++.+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            377777777777777777777777777777653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.88  E-value=3e-09  Score=67.15  Aligned_cols=84  Identities=14%  Similarity=0.309  Sum_probs=63.4

Q ss_pred             CceeecCCCCccccchhccC-C--CCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccc----------
Q psy12011          6 LQVHFCGLFPESFLTWSNLK-P--NLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKR----------   72 (94)
Q Consensus         6 ~~~~~c~~c~~~~~~~~~l~-~--~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~----------   72 (94)
                      +..+.|+.|++.|. ...|. |  .-.+++.|. |++.+ ....|..|+..+...++ +.|..|+..|..          
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kp-i~C~fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRL-ITCRFCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCc-eeCCCCCCccccCccccchhhh
Confidence            34567999998885 34454 2  113788898 98655 56788889888888777 999999988842          


Q ss_pred             hhHHHHHHHHhcCcccCCCCCC
Q psy12011         73 KGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        73 ~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      ...|..|..+. +.+++.|..|
T Consensus       527 ~s~Lt~HE~~C-G~rt~~C~~C  547 (567)
T PLN03086        527 LRGMSEHESIC-GSRTAPCDSC  547 (567)
T ss_pred             hhhHHHHHHhc-CCcceEcccc
Confidence            35788888874 8899999887

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.78  E-value=1.3e-08  Score=64.36  Aligned_cols=60  Identities=25%  Similarity=0.486  Sum_probs=51.3

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      ++++.|..|++.|. ...+..|+..++  .+ +.|+ |+..+ ....|..|+.+|.+.+++.|..|
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kp-v~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC  510 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EP-LQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFC  510 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CC-ccCC-CCCCc-chhHHHhhhhccCCCCceeCCCC
Confidence            45678999999996 577899999874  56 9999 99755 66899999999999999999987

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.77  E-value=5.2e-09  Score=40.16  Aligned_cols=24  Identities=29%  Similarity=0.802  Sum_probs=18.7

Q ss_pred             HHcchhhhcCCCCceeCCCCccccc
Q psy12011         47 LYSHKKDECGQEPRFQCPQCSYRTK   71 (94)
Q Consensus        47 l~~h~~~~~~~~~~~~c~~c~~~f~   71 (94)
                      |..|++.|.++++ |.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~-~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKP-YKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSS-EEESSSSEEES
T ss_pred             HHHHhhhcCCCCC-CCCCCCcCeeC
Confidence            6678888888777 88888887775

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.76  E-value=5e-09  Score=40.19  Aligned_cols=20  Identities=20%  Similarity=0.305  Sum_probs=18.8

Q ss_pred             HHHHHHHHhcCcccCCCCCC
Q psy12011         75 NLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        75 ~l~~h~~~~~~~~~~~c~~C   94 (94)
                      +|.+|+++|++++||.|+.|
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C   20 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYC   20 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSS
T ss_pred             CHHHHhhhcCCCCCCCCCCC
Confidence            58899999999999999998

...

>PHA00733 hypothetical protein

Probab=98.72  E-value=9e-09  Score=54.03  Aligned_cols=55  Identities=20%  Similarity=0.309  Sum_probs=46.1

Q ss_pred             CCCCCceeecCCCCccccchhccC-CCC--CCccccccchhhccChHHHHcchhhhcC
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-PNL--NGMFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-~~~--~k~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      .+.+.++|.|+.|++.|...+.|. |..  +.++.|..|++.|.....|..|+...++
T Consensus        67 ~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         67 TSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             ccCCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            345678999999999999999987 322  5689999999999999999999876654

>PHA00732 hypothetical protein

Probab=98.58  E-value=3.6e-08  Score=47.59  Aligned_cols=44  Identities=25%  Similarity=0.517  Sum_probs=24.2

Q ss_pred             ccccccchhhccChHHHHcchhh-hcCCCCceeCCCCcccccchhHHHHHHH
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKD-ECGQEPRFQCPQCSYRTKRKGNLKSHLA   81 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~-~~~~~~~~~c~~c~~~f~~~~~l~~h~~   81 (94)
                      ||.|..|++.|.....|..|++. |.   + +.|..|++.|.   .+..|.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~-~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---L-TKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---C-CccCCCCCEeC---Chhhhhc
Confidence            35566666666666666666553 32   2 45666666665   2344544

>PHA00616 hypothetical protein

Probab=98.56  E-value=3.3e-08  Score=42.15  Aligned_cols=34  Identities=18%  Similarity=0.348  Sum_probs=30.8

Q ss_pred             ccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      ||+|..||+.|...+.+..|++.++++++ +.+..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~-~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK-LTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc-cceeE
Confidence            68999999999999999999999999888 87754

>KOG3993|consensus

Probab=98.42  E-value=2.3e-08  Score=60.79  Aligned_cols=79  Identities=24%  Similarity=0.426  Sum_probs=64.2

Q ss_pred             ceeecCCCCccccchhccC-C----CCCCccccccchhhccChHHHHcchhhhcC--------CCC--------------
Q psy12011          7 QVHFCGLFPESFLTWSNLK-P----NLNGMFACDLCDKEYKYKRNLYSHKKDECG--------QEP--------------   59 (94)
Q Consensus         7 ~~~~c~~c~~~~~~~~~l~-~----~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~--------~~~--------------   59 (94)
                      ..|+|..|...|.+...|. |    .....|+|.+|++.|.-+.+|..|.++|.-        ..+              
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            3478888888888877776 3    344579999999999999999999998841        111              


Q ss_pred             ----------ceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         60 ----------RFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        60 ----------~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                                .|.|..|++.|....-|+.|+.+|+.
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                      38999999999999999999988874

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.38  E-value=4.3e-07  Score=33.60  Aligned_cols=23  Identities=35%  Similarity=0.752  Sum_probs=18.1

Q ss_pred             eeCCCCcccccchhHHHHHHHHh
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIR   83 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~   83 (94)
                      |.|..|++.|....+|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57888888888888888888763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.22  E-value=1.8e-06  Score=31.94  Aligned_cols=24  Identities=38%  Similarity=0.866  Sum_probs=18.1

Q ss_pred             eeCCCCcccccchhHHHHHHHHhc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      |.|..|++.|.....|..|+++++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            578888888888888888888764

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.21  E-value=1.2e-06  Score=33.71  Aligned_cols=26  Identities=19%  Similarity=0.431  Sum_probs=20.9

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      ||.|..|++.|....+|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            47888888888888888888877653

>PHA00732 hypothetical protein

Probab=98.09  E-value=3.6e-06  Score=40.68  Aligned_cols=32  Identities=28%  Similarity=0.529  Sum_probs=27.2

Q ss_pred             ceeCCCCcccccchhHHHHHHHH-hcCcccCCCCCC
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAI-RHECYLDDSANC   94 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~-~~~~~~~~c~~C   94 (94)
                      ||.|..|++.|....+|..|++. |.+   +.|..|
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~C   33 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVC   33 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCC
Confidence            48999999999999999999985 553   578777

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.08  E-value=8.2e-06  Score=36.61  Aligned_cols=52  Identities=33%  Similarity=0.602  Sum_probs=35.9

Q ss_pred             ccccccchhhccChHHHHcchhh-hcCCCCceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKD-ECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~-~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      .|.|+.|++. .....|..|... |..+...+.|+.|...+.  .+|..|+...|+
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            4678888884 455678888665 444333489999987544  488889887763

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.07  E-value=4.9e-06  Score=36.39  Aligned_cols=35  Identities=31%  Similarity=0.498  Sum_probs=23.9

Q ss_pred             hcCCCCceeCCCCcccccchhHHHHHHHHhcCccc
Q psy12011         54 ECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYL   88 (94)
Q Consensus        54 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   88 (94)
                      +.....|-.|++|+..+...-+|++|+.+.|+.||
T Consensus        18 ~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   18 KSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            33334448999999999999999999999888876

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.00  E-value=2.7e-06  Score=31.36  Aligned_cols=23  Identities=30%  Similarity=0.761  Sum_probs=19.2

Q ss_pred             cccccchhhccChHHHHcchhhh
Q psy12011         32 FACDLCDKEYKYKRNLYSHKKDE   54 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~~~   54 (94)
                      |+|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57888999999999999888763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.82  E-value=9e-06  Score=31.14  Aligned_cols=26  Identities=35%  Similarity=0.775  Sum_probs=22.1

Q ss_pred             ccccccchhhccChHHHHcchhhhcC
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      +|+|..|++.|.....|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57899999999999999999887643

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.66  E-value=5.3e-05  Score=37.75  Aligned_cols=72  Identities=21%  Similarity=0.384  Sum_probs=21.5

Q ss_pred             ecCCCCccccchhccCCCCCCcccccc-chhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHh
Q psy12011         10 FCGLFPESFLTWSNLKPNLNGMFACDL-CDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIR   83 (94)
Q Consensus        10 ~c~~c~~~~~~~~~l~~~~~k~~~c~~-c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~   83 (94)
                      .|..|+..|.....|..+-...+.-.. ....+.....+..+...... .. +.|..|++.|.....|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~-~~-~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVK-ES-FRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------SS-EEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccC-CC-CCCCccCCCCcCHHHHHHHHcCc
Confidence            377888888887777622222221111 11112222333333332222 34 99999999999999999999975

>smart00355 ZnF_C2H2 zinc finger

Probab=97.66  E-value=5.6e-05  Score=28.15  Aligned_cols=24  Identities=33%  Similarity=0.751  Sum_probs=16.2

Q ss_pred             eeCCCCcccccchhHHHHHHHHhc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            356777777777777777776543

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.60  E-value=3.4e-05  Score=28.31  Aligned_cols=23  Identities=30%  Similarity=0.801  Sum_probs=17.7

Q ss_pred             cccccchhhccChHHHHcchhhh
Q psy12011         32 FACDLCDKEYKYKRNLYSHKKDE   54 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~~~   54 (94)
                      |.|+.|++.|.....|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            57888999999999999888765

...

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.58  E-value=0.0001  Score=27.34  Aligned_cols=24  Identities=54%  Similarity=1.089  Sum_probs=17.9

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |+|+.|+.... ...|..|++.+++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            67888987777 7789999988764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.48  E-value=4e-05  Score=45.76  Aligned_cols=24  Identities=33%  Similarity=0.686  Sum_probs=19.4

Q ss_pred             CCCceeCCCCcccccchhHHHHHHH
Q psy12011         57 QEPRFQCPQCSYRTKRKGNLKSHLA   81 (94)
Q Consensus        57 ~~~~~~c~~c~~~f~~~~~l~~h~~   81 (94)
                      .+| |+|.+|++.+.....|+.|..
T Consensus       396 ~KP-YrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         396 DKP-YRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CCc-eeccccchhhccCccceeccc
Confidence            366 999999999988888877754

>PRK04860 hypothetical protein; Provisional

Probab=97.44  E-value=0.00013  Score=39.83  Aligned_cols=31  Identities=13%  Similarity=0.390  Sum_probs=24.8

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      +|.|. |+.   ....+++|.+++.++++|.|..|
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C  149 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRC  149 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCC
Confidence            38887 876   66677888888888888888877

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.22  E-value=0.00065  Score=30.38  Aligned_cols=33  Identities=24%  Similarity=0.410  Sum_probs=26.3

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcC--cccCCCCCC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHE--CYLDDSANC   94 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~--~~~~~c~~C   94 (94)
                      |.|+.|++. .....|..|....|.  .+.+.|++|
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC   37 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPIC   37 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCc
Confidence            899999994 556789999887654  357899987

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.18  E-value=0.00028  Score=26.12  Aligned_cols=24  Identities=29%  Similarity=0.613  Sum_probs=20.2

Q ss_pred             cccccchhhccChHHHHcchhhhc
Q psy12011         32 FACDLCDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~~~~   55 (94)
                      ++|..|++.|.....+..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            478899999999999999988654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.14  E-value=0.00045  Score=25.72  Aligned_cols=22  Identities=27%  Similarity=0.591  Sum_probs=15.3

Q ss_pred             eeCCCCcccccchhHHHHHHHH
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAI   82 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~   82 (94)
                      |.|..|++.|.....+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4567777777777777777664

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.11  E-value=0.00041  Score=30.46  Aligned_cols=34  Identities=21%  Similarity=0.336  Sum_probs=24.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      ...+.|..|++|+..+....+|..|+...++.++
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            4556788999999999999999999988887665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG3993|consensus

Probab=97.07  E-value=0.00015  Score=44.90  Aligned_cols=53  Identities=25%  Similarity=0.501  Sum_probs=46.3

Q ss_pred             ccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhc
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      -|.|.+|...|.+.-.|.+|.-..+.... |+|++|+|.|+=..||-.|.|=|-
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vE-YrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVE-YRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEee-ecCCcccccccCchhhhhhhcccC
Confidence            47899999999999999999877666666 999999999999999999987553

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.90  E-value=0.00044  Score=25.73  Aligned_cols=23  Identities=30%  Similarity=0.830  Sum_probs=19.1

Q ss_pred             cccccchhhccChHHHHcchhhh
Q psy12011         32 FACDLCDKEYKYKRNLYSHKKDE   54 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~~~   54 (94)
                      |.|.+|++.|.....+..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56889999999999998887654

>PRK04860 hypothetical protein; Provisional

Probab=96.73  E-value=0.00082  Score=36.78  Aligned_cols=38  Identities=18%  Similarity=0.516  Sum_probs=32.0

Q ss_pred             ccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccch
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRK   73 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~   73 (94)
                      +|.|. |+.   ....+..|.+++.++++ |.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~-YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAV-YRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCcc-EECCCCCceeEEe
Confidence            68897 886   56667899999999888 9999999888654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.72  E-value=0.0013  Score=25.00  Aligned_cols=21  Identities=43%  Similarity=0.823  Sum_probs=12.5

Q ss_pred             cccccchhhccChHHHHcchh
Q psy12011         32 FACDLCDKEYKYKRNLYSHKK   52 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~   52 (94)
                      |.|..|++.|.....+..|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            446666666666666666554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.90  E-value=0.0055  Score=37.06  Aligned_cols=37  Identities=24%  Similarity=0.521  Sum_probs=26.9

Q ss_pred             CCCceeCCC--CcccccchhHHHHHHHHh-------------------cCcccCCCCCC
Q psy12011         57 QEPRFQCPQ--CSYRTKRKGNLKSHLAIR-------------------HECYLDDSANC   94 (94)
Q Consensus        57 ~~~~~~c~~--c~~~f~~~~~l~~h~~~~-------------------~~~~~~~c~~C   94 (94)
                      ++| |+|++  |.+.+.....|+.|+..-                   ..+|||.|..|
T Consensus       347 ~Kp-ykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC  404 (423)
T COG5189         347 GKP-YKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVC  404 (423)
T ss_pred             Cce-ecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceecccc
Confidence            355 88876  778888877787777532                   24599999887

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.87  E-value=0.0098  Score=22.26  Aligned_cols=20  Identities=25%  Similarity=0.599  Sum_probs=12.5

Q ss_pred             eeCCCCcccccchhHHHHHHH
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLA   81 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~   81 (94)
                      ..|+.||+.| ....|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4677777777 4445566654

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=95.13  E-value=0.017  Score=23.75  Aligned_cols=10  Identities=20%  Similarity=0.574  Sum_probs=5.0

Q ss_pred             eeCCCCcccc
Q psy12011         61 FQCPQCSYRT   70 (94)
Q Consensus        61 ~~c~~c~~~f   70 (94)
                      +.|+.|+..|
T Consensus        26 v~C~~C~~~~   35 (38)
T TIGR02098        26 VRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEE
Confidence            4555555443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=95.01  E-value=0.021  Score=23.34  Aligned_cols=10  Identities=20%  Similarity=0.683  Sum_probs=5.3

Q ss_pred             eeCCCCcccc
Q psy12011         61 FQCPQCSYRT   70 (94)
Q Consensus        61 ~~c~~c~~~f   70 (94)
                      .+|+.|+..|
T Consensus        26 v~C~~C~~~f   35 (36)
T PF13717_consen   26 VRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEe
Confidence            5555555444

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.93  E-value=0.031  Score=22.29  Aligned_cols=22  Identities=23%  Similarity=0.457  Sum_probs=17.7

Q ss_pred             eeCCCCcccccchhHHHHHHHH
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAI   82 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~   82 (94)
                      |.|..|+..|.....+..|+..
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             eEccccCCccCCHHHHHHHHCh
Confidence            7888888888888888877764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=94.60  E-value=0.027  Score=23.15  Aligned_cols=32  Identities=19%  Similarity=0.587  Sum_probs=16.6

Q ss_pred             ccccchhhccChHHHHcchhhhcCCCCceeCCCCcccc
Q psy12011         33 ACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRT   70 (94)
Q Consensus        33 ~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f   70 (94)
                      +|+.|+..|..+..-     ...+... .+|+.|+..|
T Consensus         4 ~CP~C~~~f~v~~~~-----l~~~~~~-vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDDK-----LPAGGRK-VRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHHH-----cccCCcE-EECCCCCcEe
Confidence            456666666555431     1122234 6677666555

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.58  E-value=0.012  Score=36.19  Aligned_cols=61  Identities=21%  Similarity=0.459  Sum_probs=53.3

Q ss_pred             CccccccchhhccChHHHHcchh--hhcCC--CCceeCC--CCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKK--DECGQ--EPRFQCP--QCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~--~~~~~--~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      .++.+..|...|.....+..|.+  .|.++  ++ +.|+  .|++.|.....+.+|..+|.+..+..+
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP-FSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCc-eeeeccCCCccccccccccCCcccccCCCcccc
Confidence            36788899999999999999999  78888  67 9999  799999999999999999988877665

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=94.28  E-value=0.037  Score=23.39  Aligned_cols=28  Identities=14%  Similarity=0.330  Sum_probs=13.3

Q ss_pred             eecCCCCccccchhccCCCCCCccccccch
Q psy12011          9 HFCGLFPESFLTWSNLKPNLNGMFACDLCD   38 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~   38 (94)
                      |.|..||..|.....+..  .....|+.||
T Consensus         6 y~C~~Cg~~fe~~~~~~~--~~~~~CP~Cg   33 (42)
T PF09723_consen    6 YRCEECGHEFEVLQSISE--DDPVPCPECG   33 (42)
T ss_pred             EEeCCCCCEEEEEEEcCC--CCCCcCCCCC
Confidence            555666655554433222  3344455554

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=93.98  E-value=0.051  Score=24.71  Aligned_cols=32  Identities=28%  Similarity=0.670  Sum_probs=17.8

Q ss_pred             CccccccchhhccChHHHHcchhhhcCCCCceeCCCCc
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCS   67 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~   67 (94)
                      ..|.|+.||+.......     +...-..+ |.|+.||
T Consensus        26 v~F~CPnCGe~~I~Rc~-----~CRk~g~~-Y~Cp~CG   57 (61)
T COG2888          26 VKFPCPNCGEVEIYRCA-----KCRKLGNP-YRCPKCG   57 (61)
T ss_pred             eEeeCCCCCceeeehhh-----hHHHcCCc-eECCCcC
Confidence            35678888755433321     12222355 8888887

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=93.02  E-value=0.085  Score=21.81  Aligned_cols=13  Identities=15%  Similarity=0.112  Sum_probs=7.0

Q ss_pred             eecCCCCccccch
Q psy12011          9 HFCGLFPESFLTW   21 (94)
Q Consensus         9 ~~c~~c~~~~~~~   21 (94)
                      |.|+.||..|...
T Consensus         6 y~C~~Cg~~fe~~   18 (41)
T smart00834        6 YRCEDCGHTFEVL   18 (41)
T ss_pred             EEcCCCCCEEEEE
Confidence            5566666555443

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=92.51  E-value=0.14  Score=28.34  Aligned_cols=8  Identities=25%  Similarity=0.501  Sum_probs=3.9

Q ss_pred             eeecCCCC
Q psy12011          8 VHFCGLFP   15 (94)
Q Consensus         8 ~~~c~~c~   15 (94)
                      .|+|++||
T Consensus       134 ~~vC~vCG  141 (166)
T COG1592         134 VWVCPVCG  141 (166)
T ss_pred             EEEcCCCC
Confidence            45555554

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.34  E-value=0.16  Score=20.22  Aligned_cols=24  Identities=29%  Similarity=0.937  Sum_probs=14.8

Q ss_pred             cccccchhhccChHHHHcchhhhcCCCCceeCCCCcc
Q psy12011         32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSY   68 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~   68 (94)
                      |.|..||..+....            .+ +.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~-~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------AP-WVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CC-CcCcCCCC
Confidence            56778874442211            34 88888874

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=92.30  E-value=0.12  Score=27.97  Aligned_cols=39  Identities=21%  Similarity=0.586  Sum_probs=20.5

Q ss_pred             CCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCccccc
Q psy12011         28 LNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTK   71 (94)
Q Consensus        28 ~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~   71 (94)
                      +...|.|+.|+..|.....+.. .  .. ... |.|+.||....
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~-~--d~-~~~-f~Cp~Cg~~l~  134 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQL-L--DM-DGT-FTCPRCGEELE  134 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHh-c--CC-CCc-EECCCCCCEEE
Confidence            3445677777766665433221 0  11 233 77777776543

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=92.12  E-value=0.13  Score=22.61  Aligned_cols=28  Identities=14%  Similarity=0.354  Sum_probs=13.3

Q ss_pred             eecCCCCccccchhccCCCCCCccccccch
Q psy12011          9 HFCGLFPESFLTWSNLKPNLNGMFACDLCD   38 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~   38 (94)
                      |.|..||..|.....+..  +..-.|+.||
T Consensus         6 y~C~~Cg~~fe~~~~~~~--~~~~~CP~Cg   33 (52)
T TIGR02605         6 YRCTACGHRFEVLQKMSD--DPLATCPECG   33 (52)
T ss_pred             EEeCCCCCEeEEEEecCC--CCCCCCCCCC
Confidence            556666665554322211  2333455555

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=91.69  E-value=0.16  Score=21.78  Aligned_cols=28  Identities=11%  Similarity=0.019  Sum_probs=13.3

Q ss_pred             eeecCCCCccccchhccCCCCCCccccccchhh
Q psy12011          8 VHFCGLFPESFLTWSNLKPNLNGMFACDLCDKE   40 (94)
Q Consensus         8 ~~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~   40 (94)
                      .|.|+.||..|......     ....|+.||..
T Consensus         3 ~y~C~~CG~~~~~~~~~-----~~~~Cp~CG~~   30 (46)
T PRK00398          3 EYKCARCGREVELDEYG-----TGVRCPYCGYR   30 (46)
T ss_pred             EEECCCCCCEEEECCCC-----CceECCCCCCe
Confidence            45666666554432211     14455555543

>KOG1146|consensus

Probab=91.68  E-value=0.21  Score=35.87  Aligned_cols=56  Identities=29%  Similarity=0.611  Sum_probs=43.6

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhc-------------------------CCCCceeCCCCcccccchhHHHHHH
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDEC-------------------------GQEPRFQCPQCSYRTKRKGNLKSHL   80 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~-------------------------~~~~~~~c~~c~~~f~~~~~l~~h~   80 (94)
                      +.-.+-+.|..|+..|.+...|..|++..+                         +.++ |.|..|...+....+|..|+
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p-~~C~~C~~stttng~Lsihl  538 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP-YPCRACNYSTTTNGNLSIHL  538 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc-ccceeeeeeeecchHHHHHH
Confidence            344467788888888888888888887611                         2244 89999999999999999999


Q ss_pred             HH
Q psy12011         81 AI   82 (94)
Q Consensus        81 ~~   82 (94)
                      +.
T Consensus       539 qS  540 (1406)
T KOG1146|consen  539 QS  540 (1406)
T ss_pred             HH
Confidence            75

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=91.65  E-value=0.2  Score=20.15  Aligned_cols=10  Identities=20%  Similarity=0.252  Sum_probs=5.5

Q ss_pred             eeecCCCCcc
Q psy12011          8 VHFCGLFPES   17 (94)
Q Consensus         8 ~~~c~~c~~~   17 (94)
                      .|+|..||-.
T Consensus         2 ~~~C~~CG~i   11 (34)
T cd00729           2 VWVCPVCGYI   11 (34)
T ss_pred             eEECCCCCCE
Confidence            3556666644

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=91.33  E-value=0.14  Score=25.25  Aligned_cols=25  Identities=24%  Similarity=0.687  Sum_probs=21.6

Q ss_pred             ccccccchhhccChHHHHcchhhhc
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~   55 (94)
                      .+.|..|++.|.....|..|++.+.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCcc
Confidence            6899999999999999999998653

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=90.69  E-value=0.19  Score=21.52  Aligned_cols=10  Identities=40%  Similarity=1.255  Sum_probs=5.6

Q ss_pred             eeCCCCcccc
Q psy12011         61 FQCPQCSYRT   70 (94)
Q Consensus        61 ~~c~~c~~~f   70 (94)
                      ..|+.||...
T Consensus        20 irC~~CG~rI   29 (44)
T smart00659       20 VRCRECGYRI   29 (44)
T ss_pred             eECCCCCceE
Confidence            5666666443

present in RNA polymerase I, II and III

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=90.15  E-value=0.2  Score=25.78  Aligned_cols=30  Identities=17%  Similarity=0.415  Sum_probs=20.7

Q ss_pred             eecCCCCccccchhccCCCCCCccccccchhhccCh
Q psy12011          9 HFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYK   44 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~~~~~   44 (94)
                      .+|+.||+.|....      ..|..|+.||..|...
T Consensus        10 R~Cp~CG~kFYDLn------k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDLN------KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccCC------CCCccCCCCCCccCcc
Confidence            56888888776533      2466788888777666

The function of members of this family is unknown.

>KOG2186|consensus

Probab=90.08  E-value=0.17  Score=29.88  Aligned_cols=38  Identities=24%  Similarity=0.553  Sum_probs=16.4

Q ss_pred             cccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccc
Q psy12011         32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKR   72 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~   72 (94)
                      |.|..||....-+. +.+|+....+ .- |.|..|++.|..
T Consensus         4 FtCnvCgEsvKKp~-vekH~srCrn-~~-fSCIDC~k~F~~   41 (276)
T KOG2186|consen    4 FTCNVCGESVKKPQ-VEKHMSRCRN-AY-FSCIDCGKTFER   41 (276)
T ss_pred             Eehhhhhhhccccc-hHHHHHhccC-Ce-eEEeeccccccc
Confidence            34444444443332 2334444433 22 555555555544

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=89.91  E-value=0.22  Score=27.38  Aligned_cols=35  Identities=20%  Similarity=0.481  Sum_probs=21.9

Q ss_pred             CCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCccccc
Q psy12011         27 NLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTK   71 (94)
Q Consensus        27 ~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~   71 (94)
                      .+..-|.|+.|+..|.....+.         .. |.|+.||....
T Consensus       105 ~~~~~Y~Cp~c~~r~tf~eA~~---------~~-F~Cp~Cg~~L~  139 (158)
T TIGR00373       105 TNNMFFICPNMCVRFTFNEAME---------LN-FTCPRCGAMLD  139 (158)
T ss_pred             cCCCeEECCCCCcEeeHHHHHH---------cC-CcCCCCCCEee
Confidence            3445577777777776665543         13 78888876544

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>smart00614 ZnF_BED BED zinc finger

Probab=89.77  E-value=0.4  Score=20.90  Aligned_cols=22  Identities=32%  Similarity=0.640  Sum_probs=16.8

Q ss_pred             eeCCCCcccccc-----hhHHHHHHHH
Q psy12011         61 FQCPQCSYRTKR-----KGNLKSHLAI   82 (94)
Q Consensus        61 ~~c~~c~~~f~~-----~~~l~~h~~~   82 (94)
                      ..|..|++.+..     .++|.+|++.
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~   45 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRR   45 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHh
Confidence            688888877754     3689999884

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=89.74  E-value=0.17  Score=27.72  Aligned_cols=39  Identities=13%  Similarity=0.138  Sum_probs=22.7

Q ss_pred             ecCCCCccccc--hhc-cCC--CCCCccccccchhhccChHHHH
Q psy12011         10 FCGLFPESFLT--WSN-LKP--NLNGMFACDLCDKEYKYKRNLY   48 (94)
Q Consensus        10 ~c~~c~~~~~~--~~~-l~~--~~~k~~~c~~c~~~~~~~~~l~   48 (94)
                      .||+||.....  .+. +..  ...+.++|..||..|..-..+.
T Consensus         2 ~cp~c~~~~~~~~~s~~~~~~~~~~~~~~c~~c~~~f~~~e~~~   45 (154)
T PRK00464          2 RCPFCGHPDTRVIDSRPAEDGNAIRRRRECLACGKRFTTFERVE   45 (154)
T ss_pred             cCCCCCCCCCEeEeccccCCCCceeeeeeccccCCcceEeEecc
Confidence            68999865421  111 112  2233488999999887654443

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=89.35  E-value=0.27  Score=26.23  Aligned_cols=25  Identities=28%  Similarity=0.442  Sum_probs=16.5

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCccc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECYL   88 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~   88 (94)
                      ..|.+||+.|..-   .+|+++|+|..|
T Consensus        73 i~clecGk~~k~L---krHL~~~~gltp   97 (132)
T PF05443_consen   73 IICLECGKKFKTL---KRHLRTHHGLTP   97 (132)
T ss_dssp             EE-TBT--EESBH---HHHHHHTT-S-H
T ss_pred             eEEccCCcccchH---HHHHHHccCCCH
Confidence            8999999988765   799999987654

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=89.22  E-value=0.4  Score=21.85  Aligned_cols=52  Identities=19%  Similarity=0.469  Sum_probs=27.1

Q ss_pred             CceeecCCCCccccchhccCCCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcc
Q psy12011          6 LQVHFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSY   68 (94)
Q Consensus         6 ~~~~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~   68 (94)
                      ..+.+|..|+......     ..-..|.|+.||+.....-     .+......+ |.|+.||.
T Consensus         5 ~~~~~CtSCg~~i~~~-----~~~~~F~CPnCG~~~I~RC-----~~CRk~~~~-Y~CP~CGF   56 (59)
T PRK14890          5 MEPPKCTSCGIEIAPR-----EKAVKFLCPNCGEVIIYRC-----EKCRKQSNP-YTCPKCGF   56 (59)
T ss_pred             ccCccccCCCCcccCC-----CccCEeeCCCCCCeeEeec-----hhHHhcCCc-eECCCCCC
Confidence            3455677777543211     1134577888886522221     111122255 99999873

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=89.08  E-value=0.28  Score=18.49  Aligned_cols=9  Identities=44%  Similarity=1.291  Sum_probs=4.0

Q ss_pred             eCCCCcccc
Q psy12011         62 QCPQCSYRT   70 (94)
Q Consensus        62 ~c~~c~~~f   70 (94)
                      .|+.||..|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            344444444

Several members are annotated as putative helicases.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=88.99  E-value=0.3  Score=27.43  Aligned_cols=33  Identities=27%  Similarity=0.697  Sum_probs=19.4

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCCCCceeCCCCccccc
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTK   71 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~   71 (94)
                      ..-|.|+.|+..|.....+.         .. |.|+.||....
T Consensus       115 ~~~Y~Cp~C~~rytf~eA~~---------~~-F~Cp~Cg~~L~  147 (178)
T PRK06266        115 NMFFFCPNCHIRFTFDEAME---------YG-FRCPQCGEMLE  147 (178)
T ss_pred             CCEEECCCCCcEEeHHHHhh---------cC-CcCCCCCCCCe
Confidence            34566777776666654432         23 77777775543

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=88.83  E-value=0.15  Score=29.45  Aligned_cols=16  Identities=19%  Similarity=0.212  Sum_probs=11.0

Q ss_pred             ceeecCCCCccccchh
Q psy12011          7 QVHFCGLFPESFLTWS   22 (94)
Q Consensus         7 ~~~~c~~c~~~~~~~~   22 (94)
                      +...||+|++.|....
T Consensus         4 k~~~CPvC~~~F~~~~   19 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKK   19 (214)
T ss_pred             CceECCCCCCeeeeeE
Confidence            4567888887777654

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=88.16  E-value=0.28  Score=24.17  Aligned_cols=11  Identities=18%  Similarity=0.818  Sum_probs=6.6

Q ss_pred             eeCCCCccccc
Q psy12011         61 FQCPQCSYRTK   71 (94)
Q Consensus        61 ~~c~~c~~~f~   71 (94)
                      |.|..|+..|.
T Consensus        54 W~C~kCg~~fA   64 (89)
T COG1997          54 WKCRKCGAKFA   64 (89)
T ss_pred             EEcCCCCCeec
Confidence            66666665554

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.14  E-value=0.36  Score=21.74  Aligned_cols=23  Identities=13%  Similarity=0.535  Sum_probs=10.8

Q ss_pred             CccccccchhhccChHHHHcchh
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKK   52 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~   52 (94)
                      .-++|+-|+..|....++..|..
T Consensus        16 ~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          16 EFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             eeeeCCchhHHHHHhHHHHHHhh
Confidence            33445555555554444444443

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=87.92  E-value=0.65  Score=23.72  Aligned_cols=25  Identities=32%  Similarity=0.874  Sum_probs=23.1

Q ss_pred             eeC----CCCcccccchhHHHHHHHHhcC
Q psy12011         61 FQC----PQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        61 ~~c----~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |.|    ..|+....+...++.|.+.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            899    9999999999999999998875

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=87.55  E-value=0.35  Score=28.00  Aligned_cols=31  Identities=19%  Similarity=0.442  Sum_probs=23.1

Q ss_pred             CCCCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         56 GQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        56 ~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      .+.. |.|..|+|.|....-+..|+..-|+++
T Consensus        74 ~~~K-~~C~lc~KlFkg~eFV~KHI~nKH~e~  104 (214)
T PF04959_consen   74 DEDK-WRCPLCGKLFKGPEFVRKHIFNKHPEK  104 (214)
T ss_dssp             SSEE-EEE-SSS-EESSHHHHHHHHHHH-HHH
T ss_pred             cCCE-ECCCCCCcccCChHHHHHHHhhcCHHH
Confidence            4455 999999999999999999998877654

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=87.49  E-value=0.74  Score=19.35  Aligned_cols=22  Identities=36%  Similarity=0.543  Sum_probs=15.3

Q ss_pred             eeCCCCcccccc----hhHHHHHHHH
Q psy12011         61 FQCPQCSYRTKR----KGNLKSHLAI   82 (94)
Q Consensus        61 ~~c~~c~~~f~~----~~~l~~h~~~   82 (94)
                      ..|..|++.+..    .++|.+|++.
T Consensus        17 a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   17 AKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             EEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            789999987765    4788888854

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=85.84  E-value=0.41  Score=28.51  Aligned_cols=77  Identities=16%  Similarity=0.321  Sum_probs=37.5

Q ss_pred             CCCCceeecCCCCccccchhccCC------CCCCccccccchhh-----------ccChHHHHcchhhhcCCCCceeCCC
Q psy12011          3 SQNLQVHFCGLFPESFLTWSNLKP------NLNGMFACDLCDKE-----------YKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus         3 ~~~~~~~~c~~c~~~~~~~~~l~~------~~~k~~~c~~c~~~-----------~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      ..|-++|.|..|....-....+.|      .....|+|..|++.           |........-.. ....++ +.|+.
T Consensus       137 ~hGGrif~CsfC~~flCEDDQFEHQAsCQvLe~E~~KC~SCNrlGq~sCLRCK~cfCddHvrrKg~k-y~k~k~-~PCPK  214 (314)
T PF06524_consen  137 DHGGRIFKCSFCDNFLCEDDQFEHQASCQVLESETFKCQSCNRLGQYSCLRCKICFCDDHVRRKGFK-YEKGKP-IPCPK  214 (314)
T ss_pred             cCCCeEEEeecCCCeeeccchhhhhhhhhhhhcccccccccccccchhhhheeeeehhhhhhhcccc-cccCCC-CCCCC
Confidence            356778888888764444444443      22234555555543           222211111111 112255 78888


Q ss_pred             CcccccchhHHHHHHH
Q psy12011         66 CSYRTKRKGNLKSHLA   81 (94)
Q Consensus        66 c~~~f~~~~~l~~h~~   81 (94)
                      |+........|..-.|
T Consensus       215 Cg~et~eTkdLSmStR  230 (314)
T PF06524_consen  215 CGYETQETKDLSMSTR  230 (314)
T ss_pred             CCCcccccccceeeee
Confidence            8876555544443333

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>PHA00626 hypothetical protein

Probab=85.76  E-value=0.66  Score=20.93  Aligned_cols=11  Identities=18%  Similarity=0.428  Sum_probs=5.0

Q ss_pred             ccccccchhhc
Q psy12011         31 MFACDLCDKEY   41 (94)
Q Consensus        31 ~~~c~~c~~~~   41 (94)
                      .|.|..||..|
T Consensus        23 rYkCkdCGY~f   33 (59)
T PHA00626         23 DYVCCDCGYND   33 (59)
T ss_pred             ceEcCCCCCee
Confidence            34455554333

>KOG2893|consensus

Probab=85.50  E-value=0.2  Score=29.42  Aligned_cols=28  Identities=29%  Similarity=0.796  Sum_probs=14.8

Q ss_pred             chhhccChHHHHcchhhhcCCCCceeCCCCccc
Q psy12011         37 CDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYR   69 (94)
Q Consensus        37 c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~   69 (94)
                      |++.|..+..|.+|++    .+. |+|..|-+-
T Consensus        16 cnrefddekiliqhqk----akh-fkchichkk   43 (341)
T KOG2893|consen   16 CNREFDDEKILIQHQK----AKH-FKCHICHKK   43 (341)
T ss_pred             cccccchhhhhhhhhh----hcc-ceeeeehhh
Confidence            5556666655555544    233 555555543

>PF05191 ADK_lid: Adenylate kinase, active site lid; InterPro: IPR007862 Adenylate kinases (ADK; 2

Probab=85.03  E-value=0.82  Score=18.63  Aligned_cols=29  Identities=21%  Similarity=0.225  Sum_probs=15.6

Q ss_pred             eecCCCCccccchhccCCCCCCccccccchhh
Q psy12011          9 HFCGLFPESFLTWSNLKPNLNGMFACDLCDKE   40 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~   40 (94)
                      ..|+.||+.|....+   .-...-.|+.||..
T Consensus         2 r~C~~Cg~~Yh~~~~---pP~~~~~Cd~cg~~   30 (36)
T PF05191_consen    2 RICPKCGRIYHIEFN---PPKVEGVCDNCGGE   30 (36)
T ss_dssp             EEETTTTEEEETTTB-----SSTTBCTTTTEB
T ss_pred             cCcCCCCCccccccC---CCCCCCccCCCCCe
Confidence            467778877655443   22223456666653

7.4.3 from EC) are phosphotransferases that catalyse the Mg-dependent reversible conversion of ATP and AMP to two molecules of ADP, an essential reaction for many processes in living cells. In large variants of adenylate kinase, the AMP and ATP substrates are buried in a domain that undergoes conformational changes from an open to a closed state when bound to substrate; the ligand is then contained within a highly specific environment required for catalysis. Adenylate kinase is a 3-domain protein consisting of a large central CORE domain flanked by a LID domain on one side and the AMP-binding NMPbind domain on the other []. The LID domain binds ATP and covers the phosphates at the active site. The substrates first bind the CORE domain, followed by closure of the active site by the LID and NMPbind domains. Comparisons of adenylate kinases have revealed a particular divergence in the active site lid. In some organisms, particularly the Gram-positive bacteria, residues in the lid domain have been mutated to cysteines and these cysteine residues (two CX(n)C motifs) are responsible for the binding of a zinc ion. The bound zinc ion in the lid domain is clearly structurally homologous to Zinc-finger domains. However, it is unclear whether the adenylate kinase lid is a novel zinc-finger DNA/RNA binding domain, or that the lid bound zinc serves a purely structural function [].; GO: 0004017 adenylate kinase activity; PDB: 3BE4_A 2OSB_B 2ORI_A 2EU8_A 3DL0_A 1P3J_A 2QAJ_A 2OO7_A 2P3S_A 3DKV_A ....

>KOG2893|consensus

Probab=84.98  E-value=0.2  Score=29.40  Aligned_cols=42  Identities=21%  Similarity=0.295  Sum_probs=32.4

Q ss_pred             ecCCCCccccchhccC-CCCCCccccccchhhccChHHHHcch
Q psy12011         10 FCGLFPESFLTWSNLK-PNLNGMFACDLCDKEYKYKRNLYSHK   51 (94)
Q Consensus        10 ~c~~c~~~~~~~~~l~-~~~~k~~~c~~c~~~~~~~~~l~~h~   51 (94)
                      +|=+|++.|-+..-|. |...|.|+|.+|.+.+-.--.|..|-
T Consensus        12 wcwycnrefddekiliqhqkakhfkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             eeeecccccchhhhhhhhhhhccceeeeehhhhccCCCceeeh
Confidence            4778999999988877 78889999999988765544455553

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=84.34  E-value=0.82  Score=24.25  Aligned_cols=31  Identities=6%  Similarity=0.129  Sum_probs=21.5

Q ss_pred             eecCCCCccccchhccCCCCCCccccccchhhccChH
Q psy12011          9 HFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYKR   45 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~~~~~~   45 (94)
                      ..|+.||+.|....      ..|..|+.||..|....
T Consensus        10 r~Cp~cg~kFYDLn------k~p~vcP~cg~~~~~~~   40 (129)
T TIGR02300        10 RICPNTGSKFYDLN------RRPAVSPYTGEQFPPEE   40 (129)
T ss_pred             ccCCCcCccccccC------CCCccCCCcCCccCcch
Confidence            67888888876533      24667888888776653

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=84.04  E-value=0.45  Score=18.90  Aligned_cols=9  Identities=44%  Similarity=1.394  Sum_probs=4.5

Q ss_pred             eeCCCCccc
Q psy12011         61 FQCPQCSYR   69 (94)
Q Consensus        61 ~~c~~c~~~   69 (94)
                      .+|..||..
T Consensus        18 irC~~CG~R   26 (32)
T PF03604_consen   18 IRCPECGHR   26 (32)
T ss_dssp             SSBSSSS-S
T ss_pred             EECCcCCCe
Confidence            556666544

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=83.92  E-value=1.3  Score=16.56  Aligned_cols=20  Identities=35%  Similarity=0.682  Sum_probs=13.6

Q ss_pred             eeCCCCcccccchhHHHHHHH
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLA   81 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~   81 (94)
                      ..|+.|++.+ ....+..|+.
T Consensus         2 v~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHH
Confidence            4678888777 4556667765

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species

Probab=81.18  E-value=1.7  Score=16.04  Aligned_cols=10  Identities=10%  Similarity=-0.217  Sum_probs=6.3

Q ss_pred             ceeecCCCCc
Q psy12011          7 QVHFCGLFPE   16 (94)
Q Consensus         7 ~~~~c~~c~~   16 (94)
                      ..|.|+.||+
T Consensus        15 v~f~CPnCG~   24 (24)
T PF07754_consen   15 VPFPCPNCGF   24 (24)
T ss_pred             ceEeCCCCCC
Confidence            4577777763

It is likely to bind zinc via its four well-conserved cysteine residues.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	94
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-04

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAI 82
          + CD C   ++YK NL SHK    G++P ++C  C  +  R  NLK+H  I
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRPANLKTHTRI 67

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	94
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-05

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.5 bits (103), Expect = 2e-07
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 32 FACDLCDKEYKYKRNLYSHKK---DECGQEPRFQCPQCSYRTKRKGNLKSHLAIRH 84
            C++C    + K +L  H++   +       F C  C  R ++  ++ +H +  H
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHRSKSH 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.6 bits (96), Expect = 2e-06
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAI 82
            C  C      K  L  H++  C   P F+C  CS+ TK+  NL  H+  
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKHMKK 59

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 32 FACDLCDKEYKYKRNLYSHKKDECGQEPR-FQCPQCSYRTKRKGNLKSHLAIRH 84
          + C +C   +     +  H   +  +    F CP C     RK +L  HL  +H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.8 bits (86), Expect = 6e-05
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 32 FACDLCDKEYKYKRNLYSHKKDECGQEPR-FQCPQCSYRTKRKGNLKSHLAIRHE 85
          + C +C + Y +  N   H      +  + + CP C     RK N+ +H+ I H+
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.95
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.9
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.88
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.88
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.85
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.85
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.84
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.83
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.82
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.82
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.81
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.81
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.81
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.8
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.8
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.79
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.79
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.78
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.78
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.76
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.76
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.76
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.75
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.74
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.74
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.72
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.72
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.71
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.71
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.69
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.69
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.69
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.68
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.68
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.68
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.67
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.66
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.66
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.66
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.65
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.64
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.64
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.63
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.63
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.63
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.62
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.62
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.62
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.62
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.62
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.62
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.62
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.62
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.62
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.62
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.62
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.62
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.62
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.62
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.62
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.61
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.61
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.61
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.61
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.61
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.61
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.61
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.61
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.61
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.61
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.61
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.61
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.61
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.61
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.61
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.61
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.61
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.61
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.6
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.6
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.6
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.6
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.6
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.6
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.6
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.6
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.6
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.6
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.6
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.6
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.6
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.59
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.59
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.58
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.58
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.57
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.57
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.56
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.54
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.54
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.54
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.53
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.53
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.53
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.53
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.52
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.52
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.52
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.52
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.52
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.51
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.51
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.51
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.51
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.51
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.51
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.5
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.5
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.5
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.49
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.48
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.48
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.48
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.47
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.47
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.47
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.47
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.46
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.46
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.46
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.45
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.44
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.43
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.43
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.43
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.42
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.42
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.41
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.39
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.38
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.35
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.34
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.32
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.32
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.31
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.27
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.27
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.26
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.26
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.26
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.26
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.26
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.25
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.24
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.24
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.24
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.21
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.21
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.21
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.2
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.17
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.17
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.17
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.15
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.15
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.14
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.14
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.13
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.1
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.1
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.1
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.09
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.02
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.02
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.0
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.98
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.97
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.94
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.93
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.92
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.9
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.89
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.88
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.86
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.86
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.83
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.82
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.8
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.8
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.79
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.79
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.76
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.76
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.76
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.75
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.75
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.75
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.74
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.73
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.7
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.7
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.69
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.14
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.68
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.67
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.67
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.1
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.64
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.62
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.58
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.57
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.56
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.52
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.51
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.51
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.49
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.48
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.47
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.45
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.84
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.45
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.83
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.45
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.44
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.82
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.38
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.38
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.37
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.63
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.18
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.09
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.27
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.11
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.06
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.8
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.62
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	95.09
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.84
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.39
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.84
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	91.83
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	91.39
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.21
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	90.82
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	90.05
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	88.0
2jz8_A	87	Uncharacterized protein BH09830; zinc binding, str	87.63
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	86.52
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	86.34
3jyw_9	72	60S ribosomal protein L43; eukaryotic ribosome, RA	85.65
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	83.61
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	82.96
2ct5_A	73	Zinc finger BED domain containing protein 1; DREF	82.7
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	81.9
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	81.05

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.95  E-value=1.1e-28  Score=129.46  Aligned_cols=92  Identities=16%  Similarity=0.322  Sum_probs=85.1

Q ss_pred             CCCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHH
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNL   76 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l   76 (94)
                      .++|+++|+|+.|++.|...+.|.     |+++++|.|+.|++.|.....|..|+++|.++++ |.|.+|++.|.....|
T Consensus        16 ~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           16 IVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR-YQCLACGKSFINYQFM   94 (133)
T ss_dssp             EETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCC-EEESSSCCEESSHHHH
T ss_pred             ecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCcc-ccCCCCCCCcCCHHHH
Confidence            468999999999999999999998     7899999999999999999999999999999888 9999999999999999


Q ss_pred             HHHHHHhcCccc------CCCCCC
Q psy12011         77 KSHLAIRHECYL------DDSANC   94 (94)
Q Consensus        77 ~~h~~~~~~~~~------~~c~~C   94 (94)
                      ..|++++++++|      |+|..|
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C  118 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPC  118 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCC
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCC
Confidence            999999998765      566655

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.90  E-value=7.3e-24  Score=106.99  Aligned_cols=90  Identities=20%  Similarity=0.414  Sum_probs=83.8

Q ss_pred             CCCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHH
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNL   76 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l   76 (94)
                      +..++++|.|..|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++++ |.|.+|++.|.....|
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L   89 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP-FKCQECGKGFCQSRTL   89 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT-TSCSSSCCCCSSHHHH
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCC-eECCCcCCcccCHHHH
Confidence            456778999999999999998887     6888999999999999999999999999999888 9999999999999999


Q ss_pred             HHHHHHhcCcccCCCC
Q psy12011         77 KSHLAIRHECYLDDSA   92 (94)
Q Consensus        77 ~~h~~~~~~~~~~~c~   92 (94)
                      ..|+++|+++++|...
T Consensus        90 ~~H~~~H~~~~~~~~~  105 (106)
T 2ee8_A           90 AVHKTLHMQTSSPTAA  105 (106)
T ss_dssp             HHHHHHTTSCCCCCCC
T ss_pred             HHHHHHhCCCCCCcCC
Confidence            9999999999999764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=5.4e-24  Score=109.92  Aligned_cols=91  Identities=24%  Similarity=0.377  Sum_probs=83.4

Q ss_pred             CCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhh---hcCCCCceeCCCCcccccchh
Q psy12011          3 SQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKD---ECGQEPRFQCPQCSYRTKRKG   74 (94)
Q Consensus         3 ~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~---~~~~~~~~~c~~c~~~f~~~~   74 (94)
                      .+++++|.|+.|++.|.....|.     |.++++|.|..|++.|.....|..|+..   +.++.+ |.|..|++.|....
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~-~~C~~C~~~f~~~~   80 (124)
T 2dlq_A            2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-FTCSVCQETFRRRM   80 (124)
T ss_dssp             CCCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC-EECSSSCCEESSHH
T ss_pred             CCCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC-eECCCCCCccCCHH
Confidence            46889999999999999999887     6888999999999999999999999985   456666 99999999999999


Q ss_pred             HHHHHHHHhcCcccCCCCCC
Q psy12011         75 NLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        75 ~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|..|+++|+++++|.|..|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~C  100 (124)
T 2dlq_A           81 ELRLHMVSHTGEMPYKCSSC  100 (124)
T ss_dssp             HHHHHHHHHSSSCSEECSSS
T ss_pred             HHHHHHHHcCCCCCccCCCc
Confidence            99999999999999999987

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=4e-24  Score=109.77  Aligned_cols=91  Identities=21%  Similarity=0.493  Sum_probs=85.3

Q ss_pred             CCCCceeecCC--CCccccchhccC-----CCCCCccccc--cchhhccChHHHHcchhhhcCCCCceeCCCCcccccch
Q psy12011          3 SQNLQVHFCGL--FPESFLTWSNLK-----PNLNGMFACD--LCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRK   73 (94)
Q Consensus         3 ~~~~~~~~c~~--c~~~~~~~~~l~-----~~~~k~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~   73 (94)
                      ++++++|.|..  |++.|.....|.     |.++++|.|.  .|++.|.....|..|++.|.++++ |.|..|++.|...
T Consensus         1 a~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~   79 (119)
T 2jp9_A            1 ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP-FQCKTCQRKFSRS   79 (119)
T ss_dssp             CCSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCH
T ss_pred             CCCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC-ccCCccCchhCCH
Confidence            46889999997  999999999887     6888999999  799999999999999999999888 9999999999999


Q ss_pred             hHHHHHHHHhcCcccCCC--CCC
Q psy12011         74 GNLKSHLAIRHECYLDDS--ANC   94 (94)
Q Consensus        74 ~~l~~h~~~~~~~~~~~c--~~C   94 (94)
                      ..|..|+++|+++++|.|  +.|
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~~~C  102 (119)
T 2jp9_A           80 DHLKTHTRTHTGEKPFSCRWPSC  102 (119)
T ss_dssp             HHHHHHHHHHHTCCCEECCSTTC
T ss_pred             HHHHHHHHHhcCCCCeeCCCCCC
Confidence            999999999999999999  777

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=2e-23  Score=103.71  Aligned_cols=88  Identities=23%  Similarity=0.366  Sum_probs=81.7

Q ss_pred             CCCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHH
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNL   76 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l   76 (94)
                      ++.++++|.|+.|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l   80 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP-FKCQICPYASRNSSQL   80 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCC-EECSSSSCEESSHHHH
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCCCCCccCCHHHH
Confidence            467889999999999999998887     6888999999999999999999999999999888 9999999999999999


Q ss_pred             HHHHHHhcCcccCC
Q psy12011         77 KSHLAIRHECYLDD   90 (94)
Q Consensus        77 ~~h~~~~~~~~~~~   90 (94)
                      ..|+++|+++++..
T Consensus        81 ~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           81 TVHLRSHTGDSGPS   94 (96)
T ss_dssp             HHHHTTCCSCCCCC
T ss_pred             HHHHHHhcCCCCCC
Confidence            99999999987654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.89  E-value=5.3e-24  Score=117.03  Aligned_cols=89  Identities=24%  Similarity=0.476  Sum_probs=54.8

Q ss_pred             CCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHH
Q psy12011          5 NLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSH   79 (94)
Q Consensus         5 ~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h   79 (94)
                      ++++|.|+.|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|
T Consensus        74 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H  152 (190)
T 2i13_A           74 GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKP-YKCPECGKSFSREDNLHTH  152 (190)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHH
T ss_pred             CCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCC-eECCCCCcccCCHHHHHHH
Confidence            444555555555555555544     3455566666666666666666666666666555 6666666666666666666


Q ss_pred             HHHhcCcccCCCCCC
Q psy12011         80 LAIRHECYLDDSANC   94 (94)
Q Consensus        80 ~~~~~~~~~~~c~~C   94 (94)
                      +++|+++++|.|..|
T Consensus       153 ~~~H~~~~~~~C~~C  167 (190)
T 2i13_A          153 QRTHTGEKPYKCPEC  167 (190)
T ss_dssp             HHHHHCCCCEECTTT
T ss_pred             HHhcCCCCCeECCCC
Confidence            666666666666655

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.88  E-value=2.9e-23  Score=114.10  Aligned_cols=91  Identities=20%  Similarity=0.424  Sum_probs=52.4

Q ss_pred             CCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHH
Q psy12011          3 SQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLK   77 (94)
Q Consensus         3 ~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~   77 (94)
                      +.++++|.|+.|++.|.....|.     |.++++|.|..|++.|.....|..|+..|.++++ |.|..|++.|.....|.
T Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~  122 (190)
T 2i13_A           44 HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKP-YACPECGKSFSQLAHLR  122 (190)
T ss_dssp             C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCC-EECTTTCCEESSHHHHH
T ss_pred             cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCC-CcCCCCCCccCCHHHHH
Confidence            34455555555555555555554     3455556666666666666666666666655555 66666666666666666


Q ss_pred             HHHHHhcCcccCCCCCC
Q psy12011         78 SHLAIRHECYLDDSANC   94 (94)
Q Consensus        78 ~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|+++++|.|..|
T Consensus       123 ~H~~~h~~~~~~~C~~C  139 (190)
T 2i13_A          123 AHQRTHTGEKPYKCPEC  139 (190)
T ss_dssp             HHHHHHHCCCCEECTTT
T ss_pred             HHHHHhCCCCCeECCCC
Confidence            66666666666666655

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.88  E-value=5.7e-23  Score=94.12  Aligned_cols=59  Identities=24%  Similarity=0.583  Sum_probs=55.7

Q ss_pred             CCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         28 LNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        28 ~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      .||||.|.+|++.|...+.|..|+++|+++++ |.|.+||+.|...++|..|+++|++++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRP-RSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCC-EECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcC-eECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            37899999999999999999999999999998 999999999999999999999999885

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.87  E-value=9.4e-23  Score=100.14  Aligned_cols=82  Identities=21%  Similarity=0.391  Sum_probs=74.2

Q ss_pred             CCceeecC--CCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHH
Q psy12011          5 NLQVHFCG--LFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLK   77 (94)
Q Consensus         5 ~~~~~~c~--~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~   77 (94)
                      |+++|.|+  .|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDERK   79 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EECTTTCCEESSHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCC-ccCCCCCchhCCHHHHH
Confidence            57899998  5999999999887     6888999999999999999999999999999888 99999999999999999


Q ss_pred             HHHHHhcCcc
Q psy12011         78 SHLAIRHECY   87 (94)
Q Consensus        78 ~h~~~~~~~~   87 (94)
                      .|+++|++++
T Consensus        80 ~H~~~H~~~k   89 (90)
T 1a1h_A           80 RHTKIHLRQK   89 (90)
T ss_dssp             HHHGGGGC--
T ss_pred             HHHHHhcccC
Confidence            9999999876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=7.7e-22  Score=101.93  Aligned_cols=87  Identities=22%  Similarity=0.329  Sum_probs=71.6

Q ss_pred             CCceeecC--CCCccccchhccC----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC--CcccccchhHH
Q psy12011          5 NLQVHFCG--LFPESFLTWSNLK----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ--CSYRTKRKGNL   76 (94)
Q Consensus         5 ~~~~~~c~--~c~~~~~~~~~l~----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~--c~~~f~~~~~l   76 (94)
                      ++++|.|+  .|++.|.....|.    ..++++|.|..|++.|.....|..|++.|.++++ |.|..  |++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKP-FQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCC-EECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-eeCCCCCCcCccCCHHHH
Confidence            45788888  7999888888776    1377888999999999998889999888888777 89975  99999998999


Q ss_pred             HHHHHHhcCcccCCCC
Q psy12011         77 KSHLAIRHECYLDDSA   92 (94)
Q Consensus        77 ~~h~~~~~~~~~~~c~   92 (94)
                      ..|+++|+++++|.|+
T Consensus        81 ~~H~~~h~~~~~~~C~   96 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCP   96 (124)
T ss_dssp             HHHHHHHHCCCCCCCC
T ss_pred             HHHHHHhCCCCceECC
Confidence            9999999999999885

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=9e-22  Score=99.90  Aligned_cols=83  Identities=23%  Similarity=0.408  Sum_probs=77.6

Q ss_pred             CCCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHH
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNL   76 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l   76 (94)
                      .|+++++|.| .|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP-YECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC-EECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC-eeCCCCcchhcCHHHH
Confidence            5889999999 9999999999887     6888999999999999999999999999999888 9999999999999999


Q ss_pred             HHHHHHhcCc
Q psy12011         77 KSHLAIRHEC   86 (94)
Q Consensus        77 ~~h~~~~~~~   86 (94)
                      ..|+++|+..
T Consensus        82 ~~H~~~~~~~   91 (110)
T 2csh_A           82 HRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHcccc
Confidence            9999988754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.85  E-value=7.6e-22  Score=95.33  Aligned_cols=77  Identities=22%  Similarity=0.420  Sum_probs=72.1

Q ss_pred             eeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHH
Q psy12011          8 VHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAI   82 (94)
Q Consensus         8 ~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~   82 (94)
                      ||.|+.|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|....+|..|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP-HKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCC-EECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCC-CcCCCcchhhCChHHHHHHHHh
Confidence            689999999999999887     6888999999999999999999999999999888 9999999999999999999999


Q ss_pred             hcC
Q psy12011         83 RHE   85 (94)
Q Consensus        83 ~~~   85 (94)
                      |+|
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            975

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=2.5e-22  Score=101.60  Aligned_cols=89  Identities=13%  Similarity=0.250  Sum_probs=80.1

Q ss_pred             CCCCCceeecCCCCccccchhccC-C--CCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHH
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-P--NLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKS   78 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-~--~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~   78 (94)
                      .++++++|.|..|++.|.....|. |  ..+++|.|..|++.|.....|..|+. |.++++ |.|..|++.|....+|..
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~-~~C~~C~~~f~~~~~L~~   87 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKK-LTCLECMRTFKSSFSIWR   87 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGG-GEEGGGTEECSSHHHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCC-ccCccccchhCCHHHHHH
Confidence            578899999999999999999887 2  22478999999999999999999996 888777 999999999999999999


Q ss_pred             HHH-HhcCcccCCCC
Q psy12011         79 HLA-IRHECYLDDSA   92 (94)
Q Consensus        79 h~~-~~~~~~~~~c~   92 (94)
                      |++ +|.++++|.+.
T Consensus        88 H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           88 HQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHTSCCCCCCCCC
T ss_pred             HHHHHcCCCCCCCCC
Confidence            997 89999999874

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=6.9e-22  Score=105.55  Aligned_cols=82  Identities=26%  Similarity=0.429  Sum_probs=45.4

Q ss_pred             eecCCCCccccchhccC-----CCCCCcccccc--chhhccChHHHHcchhhhcCCCCceeCCC--CcccccchhHHHHH
Q psy12011          9 HFCGLFPESFLTWSNLK-----PNLNGMFACDL--CDKEYKYKRNLYSHKKDECGQEPRFQCPQ--CSYRTKRKGNLKSH   79 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h   79 (94)
                      |.|+.|++.|.....|.     |.++++|.|..  |++.|.....|..|++.|.++++ |.|..  |++.|.....|..|
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~-~~C~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCS-BCCSSTTCCCCBSSHHHHHHS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCC-ccCCCCCCCCccCCHHHHHHH
Confidence            45555555555555544     34555555554  55555555555555555555444 55554  55555555555555


Q ss_pred             HHHhcCcccCCC
Q psy12011         80 LAIRHECYLDDS   91 (94)
Q Consensus        80 ~~~~~~~~~~~c   91 (94)
                      +++|+++++|.|
T Consensus       142 ~~~H~~~k~~~c  153 (155)
T 2rpc_A          142 MHVHTSDKSGPS  153 (155)
T ss_dssp             STTTTSCCCSCS
T ss_pred             HHHhcCCCCCCC
Confidence            555555555555

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=5e-21  Score=94.78  Aligned_cols=83  Identities=19%  Similarity=0.405  Sum_probs=75.7

Q ss_pred             CCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCC--CCceeCCCCcccccchhH
Q psy12011          3 SQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ--EPRFQCPQCSYRTKRKGN   75 (94)
Q Consensus         3 ~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~--~~~~~c~~c~~~f~~~~~   75 (94)
                      .+++++|.|+.|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++  ++ |.|..|++.|.....
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-~~C~~C~~~f~~~~~   80 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-YICQSCGKGFSRPDH   80 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSS-BCCSSSCCCBSSHHH
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCc-eECCCccchhCCHHH
Confidence            57889999999999999998887     78899999999999999999999999999986  66 999999999999999


Q ss_pred             HHHHHH-HhcCc
Q psy12011         76 LKSHLA-IRHEC   86 (94)
Q Consensus        76 l~~h~~-~~~~~   86 (94)
                      |..|++ +|.++
T Consensus        81 L~~H~~~~H~~~   92 (95)
T 2yt9_A           81 LNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHTSCCC
T ss_pred             HHHHHHHhcCCC
Confidence            999997 56554

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=7e-22  Score=103.53  Aligned_cols=68  Identities=13%  Similarity=0.193  Sum_probs=66.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      +.|+++|.|++|++.|.....|..|+++|.++++ |.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus        17 h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   84 (133)
T 2lt7_A           17 VDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKK-YPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLAC   84 (133)
T ss_dssp             ETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSC-EECSSSSCEESSHHHHHHHHHHHHTCCCEEESSS
T ss_pred             cCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCC-eeCCccCeecccccchhhhccccCCCccccCCCC
Confidence            6899999999999999999999999999999888 9999999999999999999999999999999988

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.83  E-value=8.6e-21  Score=101.29  Aligned_cols=89  Identities=22%  Similarity=0.204  Sum_probs=80.3

Q ss_pred             CCCceeecCCCCccccchhccC------CCCCCc--------cccccchhhccChHHHHcchhhhcCCCCceeCCC--Cc
Q psy12011          4 QNLQVHFCGLFPESFLTWSNLK------PNLNGM--------FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ--CS   67 (94)
Q Consensus         4 ~~~~~~~c~~c~~~~~~~~~l~------~~~~k~--------~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~--c~   67 (94)
                      .+..+|.|..|++.|.....|.      |.++.+        +.|..|++.|.....|..|++.|.++++ |.|..  |+
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~   99 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP-FPCPFPGCG   99 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCS-EECSCTTTC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCc-ccCCcCCCC
Confidence            4567899999999999999887      444443        7899999999999999999999999888 99998  99


Q ss_pred             ccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         68 YRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        68 ~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      +.|.....|..|+++|+++++|.|..
T Consensus       100 ~~f~~~~~L~~H~~~h~~~~~~~C~~  125 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTGEKPFKCEF  125 (155)
T ss_dssp             CEESCHHHHHHHHTTTCSSCSBCCSS
T ss_pred             CccCCHHHHHHHHHhhCCCCCccCCC
Confidence            99999999999999999999999985

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.83  E-value=4.1e-21  Score=105.49  Aligned_cols=90  Identities=19%  Similarity=0.280  Sum_probs=61.5

Q ss_pred             CCCCceeec--CCCCccccchhccC-----CCCCCccccc--cchhhccChHHHHcch-hhhc-CCCCceeC--CCCccc
Q psy12011          3 SQNLQVHFC--GLFPESFLTWSNLK-----PNLNGMFACD--LCDKEYKYKRNLYSHK-KDEC-GQEPRFQC--PQCSYR   69 (94)
Q Consensus         3 ~~~~~~~~c--~~c~~~~~~~~~l~-----~~~~k~~~c~--~c~~~~~~~~~l~~h~-~~~~-~~~~~~~c--~~c~~~   69 (94)
                      |+++++|.|  +.|++.|.....|.     |.++++|.|.  .|++.|.....|..|+ ..|. +..+ |.|  ..|++.
T Consensus        37 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~-~~C~~~~C~k~  115 (190)
T 1tf6_A           37 HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICV-YVCHFENCGKA  115 (190)
T ss_dssp             HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSC-CEECSSSSCEE
T ss_pred             cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcce-eeCCCCCCccc
Confidence            345667777  66777777766665     5666777777  6777777777777777 4442 3344 777  667777


Q ss_pred             ccchhHHHHHHHHhcCcccCCCCC
Q psy12011         70 TKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        70 f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      |....+|..|+++|+++++|.|..
T Consensus       116 f~~~~~L~~H~~~H~~~~~~~C~~  139 (190)
T 1tf6_A          116 FKKHNQLKVHQFSHTQQLPYECPH  139 (190)
T ss_dssp             CSSHHHHHHHHGGGSSSCSSBCCS
T ss_pred             cCCHHHHHHHHHHhCCCCCccCCC
Confidence            777777777777777777777765

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=4.6e-21  Score=98.99  Aligned_cols=85  Identities=28%  Similarity=0.560  Sum_probs=74.0

Q ss_pred             CCceeecCCCCccccchhccC-----CCCCCcccccc--chhhccChHHHHcchhhhcCCCCceeCC--CCcccccchhH
Q psy12011          5 NLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDL--CDKEYKYKRNLYSHKKDECGQEPRFQCP--QCSYRTKRKGN   75 (94)
Q Consensus         5 ~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~c~--~c~~~f~~~~~   75 (94)
                      ++++|.|+.|++.|.....|.     |.++++|.|..  |++.|.....|..|++.|.++++ |.|+  .|++.|....+
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~  109 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP-YVCPFDGCNKKFAQSTN  109 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCC-CCCCSTTCCCCCSSTTT
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCc-eECCCCCCCCccCCHHH
Confidence            678999999999999998887     78899999975  99999999999999999999888 9995  59999999999


Q ss_pred             HHHHHHHhcCcccCC
Q psy12011         76 LKSHLAIRHECYLDD   90 (94)
Q Consensus        76 l~~h~~~~~~~~~~~   90 (94)
                      |..|+++|+++++++
T Consensus       110 L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C          110 LKSHILTHAKAKNNQ  124 (124)
T ss_dssp             THHHHHHHC------
T ss_pred             HHHHHHHHcccccCC
Confidence            999999999998864

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=7e-21  Score=101.54  Aligned_cols=92  Identities=18%  Similarity=0.294  Sum_probs=79.9

Q ss_pred             CCCCCceeecCC-----CCccccchhccC-----CCCCCcccccc--chhhccChHHHHcchhhhcCCCCceeCCC--Cc
Q psy12011          2 SSQNLQVHFCGL-----FPESFLTWSNLK-----PNLNGMFACDL--CDKEYKYKRNLYSHKKDECGQEPRFQCPQ--CS   67 (94)
Q Consensus         2 ~~~~~~~~~c~~-----c~~~~~~~~~l~-----~~~~k~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~c~~--c~   67 (94)
                      .+.++++|.|+.     |++.|.....|.     |.++++|.|..  |++.|.....|..|++.|.++++ |.|..  |+
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~  106 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP-YMCEHEGCS  106 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCC-EECCSTTCC
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCC-eeCCCCCCC
Confidence            467788898874     348898888876     67889999984  99999999999999999998887 99998  99


Q ss_pred             ccccchhHHHHHH-HHhcCcccCCCCC--C
Q psy12011         68 YRTKRKGNLKSHL-AIRHECYLDDSAN--C   94 (94)
Q Consensus        68 ~~f~~~~~l~~h~-~~~~~~~~~~c~~--C   94 (94)
                      +.|....+|..|+ ++|.++++|.|..  |
T Consensus       107 ~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C  136 (155)
T 2gli_A          107 KAFSNASDRAKHQNRTHSNEKPYVCKLPGC  136 (155)
T ss_dssp             CEESSSSTTHHHHHHTTCSCCCEECCSTTT
T ss_pred             CccCCHHHHHHHHHHhcCCCCCeeCCCCCC
Confidence            9999999999998 7899999999977  7

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=9.6e-21  Score=96.75  Aligned_cols=90  Identities=14%  Similarity=0.121  Sum_probs=77.7

Q ss_pred             CCCCCceeecCCCCccccchhccC-------CCCCCc-cccccchhhc--cChHHHHcchhhhcCCCCceeCCCCccccc
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-------PNLNGM-FACDLCDKEY--KYKRNLYSHKKDECGQEPRFQCPQCSYRTK   71 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-------~~~~k~-~~c~~c~~~~--~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~   71 (94)
                      .|+++++|.|+.|++.|.....|.       +.+.++ +.|..|++.|  .....|..|++.|.++++ |.|.+|++.|.
T Consensus        13 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~-~~C~~C~k~f~   91 (115)
T 2dmi_A           13 IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV-LKCMYCGHSFE   91 (115)
T ss_dssp             CCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS-CBCSSSCCBCS
T ss_pred             eeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc-eECCCCCCccC
Confidence            578899999999999999999887       233444 4599999999  888999999999999888 99999999999


Q ss_pred             chhHHHHHHHHhcCcccCCCC
Q psy12011         72 RKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        72 ~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      ...+|..|+++|+......++
T Consensus        92 ~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           92 SLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             SHHHHHHHHHHTTTTTCSCCC
T ss_pred             CHHHHHHHHHHhCCcccCCCC
Confidence            999999999998877665543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=3.5e-20  Score=88.71  Aligned_cols=65  Identities=18%  Similarity=0.499  Sum_probs=62.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      +.++++|.|.+|++.|.....|..|++.|.++++ |.|..|++.|.....|.+|+++|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP-YKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS-EECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcC-eeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            6788999999999999999999999999999888 9999999999999999999999999999987

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=3.5e-20  Score=95.52  Aligned_cols=82  Identities=22%  Similarity=0.489  Sum_probs=74.6

Q ss_pred             CCCCceeecCCCCccccchhccC--------CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchh
Q psy12011          3 SQNLQVHFCGLFPESFLTWSNLK--------PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKG   74 (94)
Q Consensus         3 ~~~~~~~~c~~c~~~~~~~~~l~--------~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~   74 (94)
                      +.++++|.|+.|++.|.....|.        +.++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|....
T Consensus        30 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~  108 (124)
T 2dlq_A           30 HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMP-YKCSSCSQQFMQKK  108 (124)
T ss_dssp             HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCS-EECSSSCCEESSHH
T ss_pred             CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-ccCCCccchhCCHH
Confidence            56788999999999999988886        3667899999999999999999999999999888 99999999999999


Q ss_pred             HHHHHHHHhcC
Q psy12011         75 NLKSHLAIRHE   85 (94)
Q Consensus        75 ~l~~h~~~~~~   85 (94)
                      .|..|++..|+
T Consensus       109 ~l~~H~~~~H~  119 (124)
T 2dlq_A          109 DLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHHHHTSS
T ss_pred             HHHHHHHHHCC
Confidence            99999986443

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.81  E-value=4.9e-20  Score=101.19  Aligned_cols=88  Identities=23%  Similarity=0.389  Sum_probs=80.3

Q ss_pred             CCCCCceeecC--CCCccccchhccC------C-CCCCcccc--ccchhhccChHHHHcchhhhcCCCCceeCCC--Ccc
Q psy12011          2 SSQNLQVHFCG--LFPESFLTWSNLK------P-NLNGMFAC--DLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ--CSY   68 (94)
Q Consensus         2 ~~~~~~~~~c~--~c~~~~~~~~~l~------~-~~~k~~~c--~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~--c~~   68 (94)
                      .|.++++|.|+  .|++.|.....|.      | .++++|.|  ..|++.|.....|..|++.|.++++ |.|..  |++
T Consensus        66 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~~C~k  144 (190)
T 1tf6_A           66 THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDK  144 (190)
T ss_dssp             TTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCS-SBCCSSSCCC
T ss_pred             HccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCC-ccCCCCCCCc
Confidence            57888999999  8999999999886      3 46789999  9999999999999999999999888 99988  999


Q ss_pred             cccchhHHHHHHHHhcCcccCCCCC
Q psy12011         69 RTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        69 ~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|.....|..|+++|++   |.|..
T Consensus       145 ~F~~~~~L~~H~~~H~~---~~C~~  166 (190)
T 1tf6_A          145 RFSLPSRLKRHEKVHAG---YPCKK  166 (190)
T ss_dssp             BCSSHHHHHHHHTSSCS---CCCCS
T ss_pred             hhcCHHHHHHHHHHhCC---CcCCC
Confidence            99999999999999998   77776

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.80  E-value=2.2e-20  Score=95.71  Aligned_cols=80  Identities=23%  Similarity=0.485  Sum_probs=74.5

Q ss_pred             CCCCceeecC--CCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC--CCCcccccch
Q psy12011          3 SQNLQVHFCG--LFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC--PQCSYRTKRK   73 (94)
Q Consensus         3 ~~~~~~~~c~--~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c--~~c~~~f~~~   73 (94)
                      |.++++|.|+  .|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++++ |.|  ..|++.|...
T Consensus        31 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~  109 (119)
T 2jp9_A           31 HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP-FSCRWPSCQKKFARS  109 (119)
T ss_dssp             HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCC-EECCSTTCCCEESSH
T ss_pred             hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCC-eeCCCCCCccccCCH
Confidence            4578899999  7999999999887     6889999999999999999999999999999888 999  8999999999


Q ss_pred             hHHHHHHHHh
Q psy12011         74 GNLKSHLAIR   83 (94)
Q Consensus        74 ~~l~~h~~~~   83 (94)
                      ..|..|+++|
T Consensus       110 ~~L~~H~~~H  119 (119)
T 2jp9_A          110 DELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHhcC
Confidence            9999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.80  E-value=1.2e-19  Score=90.47  Aligned_cols=81  Identities=23%  Similarity=0.519  Sum_probs=74.1

Q ss_pred             CCCceeecCC--CCccccchhccC-----CCCCCccccc--cchhhccChHHHHcchhhhcCCCCceeCCCCcccccchh
Q psy12011          4 QNLQVHFCGL--FPESFLTWSNLK-----PNLNGMFACD--LCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKG   74 (94)
Q Consensus         4 ~~~~~~~c~~--c~~~~~~~~~l~-----~~~~k~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~   74 (94)
                      ...++|.|..  |++.|.....|.     |.++++|.|.  .|++.|.....|..|++.|.++++ |.|.+|++.|....
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP-FQCGVCNRSFSRSD   89 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS-CBCSSSCCBCSSHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC-eECCCCcCccCCHH
Confidence            4567899997  999999999887     6888999996  699999999999999999999888 99999999999999


Q ss_pred             HHHHHHHHhcC
Q psy12011         75 NLKSHLAIRHE   85 (94)
Q Consensus        75 ~l~~h~~~~~~   85 (94)
                      .|..|+++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999874

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.79  E-value=2e-19  Score=85.40  Aligned_cols=63  Identities=32%  Similarity=0.622  Sum_probs=60.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLD   89 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~   89 (94)
                      +.++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|.+|+++|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS-EECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCC-EECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            6788999999999999999999999999999888 99999999999999999999999999986

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.79  E-value=1.8e-19  Score=88.16  Aligned_cols=79  Identities=24%  Similarity=0.490  Sum_probs=72.0

Q ss_pred             CCceeecCC--CCccccchhccC-----CCCCCccccc--cchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhH
Q psy12011          5 NLQVHFCGL--FPESFLTWSNLK-----PNLNGMFACD--LCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGN   75 (94)
Q Consensus         5 ~~~~~~c~~--c~~~~~~~~~l~-----~~~~k~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~   75 (94)
                      +.++|.|+.  |++.|.....|.     |.++++|.|.  .|++.|.....|..|++.|.++++ |.|..|++.|....+
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~   80 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP-FQCQKCDRAFSRSDH   80 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC-EECSSSSCEESSHHH
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC-ccCCCCCcccCCHHH
Confidence            356899999  999999998887     7888999997  699999999999999999999888 999999999999999


Q ss_pred             HHHHHHHhc
Q psy12011         76 LKSHLAIRH   84 (94)
Q Consensus        76 l~~h~~~~~   84 (94)
                      |..|+++|.
T Consensus        81 l~~H~~~H~   89 (89)
T 2wbs_A           81 LALHMKRHF   89 (89)
T ss_dssp             HHHHGGGGC
T ss_pred             HHHHHHhhC
Confidence            999999873

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=8.4e-20  Score=91.61  Aligned_cols=67  Identities=18%  Similarity=0.299  Sum_probs=60.6

Q ss_pred             CCCCCccccccchhhccChHHHHcchh-hh---cCCCCceeCCCCcccccchhHHHHH-HHHhcCcccCCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKK-DE---CGQEPRFQCPQCSYRTKRKGNLKSH-LAIRHECYLDDSAN   93 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~-~~---~~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~~~~~~~c~~   93 (94)
                      .++++||.|..|++.|.....|..|++ .|   .++++ |.|.+|++.|...+.|..| +++|++++||.|..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekp-f~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSS-YVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCC-EEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCC-cCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            478899999999999999999999997 47   45566 9999999999999999999 89999999999964

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=6.2e-19  Score=84.55  Aligned_cols=67  Identities=24%  Similarity=0.462  Sum_probs=61.0

Q ss_pred             CCCCcccccc--chhhccChHHHHcchh-hhcCCCCceeCCC--CcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         27 NLNGMFACDL--CDKEYKYKRNLYSHKK-DECGQEPRFQCPQ--CSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        27 ~~~k~~~c~~--c~~~~~~~~~l~~h~~-~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      +++++|.|..  |++.|.....|..|++ .|.++++ |.|..  |++.|....+|..|+++|+++++|.|.+|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   74 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS   74 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC-EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC-eECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCC
Confidence            4677888876  9999999999999998 6888787 99998  99999999999999999999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=3.5e-19  Score=94.90  Aligned_cols=87  Identities=20%  Similarity=0.212  Sum_probs=77.7

Q ss_pred             CceeecCCCCccccchhccC--------CCCCCcccccc-----chhhccChHHHHcchhhhcCCCCceeCCC--Ccccc
Q psy12011          6 LQVHFCGLFPESFLTWSNLK--------PNLNGMFACDL-----CDKEYKYKRNLYSHKKDECGQEPRFQCPQ--CSYRT   70 (94)
Q Consensus         6 ~~~~~c~~c~~~~~~~~~l~--------~~~~k~~~c~~-----c~~~~~~~~~l~~h~~~~~~~~~~~~c~~--c~~~f   70 (94)
                      |.++.|+.|++.|.....|.        |.++++|.|..     |++.|.....|..|++.|.++++ |.|..  |++.|
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f   79 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKP-HKCTFEGCRKSY   79 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCC-CCCCSTTCCCCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCC-ccCCCCCCCCcc
Confidence            45789999999999999886        45678888864     34899999999999999999888 99985  99999


Q ss_pred             cchhHHHHHHHHhcCcccCCCCC
Q psy12011         71 KRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        71 ~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .....|..|+++|+++++|.|..
T Consensus        80 ~~~~~l~~H~~~h~~~~~~~C~~  102 (155)
T 2gli_A           80 SRLENLKTHLRSHTGEKPYMCEH  102 (155)
T ss_dssp             SSHHHHHHHHHHTTTCCCEECCS
T ss_pred             cCHHHHHHHHHHcCCCCCeeCCC
Confidence            99999999999999999999987

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=8.7e-19  Score=86.80  Aligned_cols=68  Identities=25%  Similarity=0.571  Sum_probs=64.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      ..++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   70 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC   70 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCS-EECSSSCCEESSHHHHHHHHHHSCCCCCEECSSS
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCC-EeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCC
Confidence            3567899999999999999999999999999888 9999999999999999999999999999999988

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=1e-18  Score=82.12  Aligned_cols=64  Identities=27%  Similarity=0.460  Sum_probs=60.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDD   90 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   90 (94)
                      ++++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|+++++..
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCS-EECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-EeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            5778999999999999999999999999999888 999999999999999999999999998864

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.76  E-value=2.1e-18  Score=86.85  Aligned_cols=68  Identities=21%  Similarity=0.517  Sum_probs=64.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      ...+++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|+++++|.|..|
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   79 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERP-YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC   79 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCC-CBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSS
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCCCCccchhCCHHHHHHHHHHhCCCCCeECCCc
Confidence            5677899999999999999999999999999888 9999999999999999999999999999999988

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=7.8e-19  Score=88.97  Aligned_cols=67  Identities=22%  Similarity=0.454  Sum_probs=64.6

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      |+++++|.| .|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   71 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNIC   71 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHHHHHHHTTTCCCCCEECSSS
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcC-ccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCC
Confidence            788999999 999999999999999999999888 9999999999999999999999999999999988

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.8e-18  Score=85.51  Aligned_cols=67  Identities=27%  Similarity=0.563  Sum_probs=63.6

Q ss_pred             CCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCc--ccCCCCCC
Q psy12011         27 NLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHEC--YLDDSANC   94 (94)
Q Consensus        27 ~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~--~~~~c~~C   94 (94)
                      +++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|+++  ++|.|..|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   71 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKP-YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSC   71 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCS-EECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCC-CcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCc
Confidence            567899999999999999999999999999888 99999999999999999999999997  99999988

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.75  E-value=3.7e-19  Score=81.37  Aligned_cols=53  Identities=17%  Similarity=0.258  Sum_probs=50.2

Q ss_pred             CCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011          5 NLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus         5 ~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      .||||.|.+||+.|...+.|.     |++++||.|.+|++.|...+.|..|+++|.|+
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            378999999999999999998     89999999999999999999999999999884

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=5e-18  Score=82.47  Aligned_cols=68  Identities=22%  Similarity=0.331  Sum_probs=63.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCC----CCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ----EPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~----~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      |+++++|.|..|++.|.....|..|++.+.+.    ++ |.|..|++.|.....|..|+++|++++++.|..|
T Consensus        10 H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A           10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA-FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCC-EECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcc-eECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            78899999999999999999999999887765    45 9999999999999999999999999999999876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.74  E-value=2e-18  Score=84.50  Aligned_cols=66  Identities=26%  Similarity=0.516  Sum_probs=61.5

Q ss_pred             CCCccccc--cchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         28 LNGMFACD--LCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        28 ~~k~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      ++++|.|.  .|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   68 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKP-FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDIC   68 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCC
Confidence            46899998  699999999999999999999888 9999999999999999999999999999999987

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=4e-18  Score=80.54  Aligned_cols=63  Identities=19%  Similarity=0.405  Sum_probs=59.2

Q ss_pred             CCCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCccc
Q psy12011         25 KPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYL   88 (94)
Q Consensus        25 ~~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   88 (94)
                      .|+++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|.+|+++|+++.+
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP-YKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC-EECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC-eECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            38889999999999999999999999999999888 9999999999999999999999998764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=3.3e-18  Score=82.40  Aligned_cols=63  Identities=25%  Similarity=0.538  Sum_probs=60.6

Q ss_pred             ccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      ||.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   63 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRP-YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC   63 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCC-EECSSSCCEESSHHHHHHHHHHHHTCCCEECTTT
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCC-eeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCc
Confidence            58899999999999999999999999888 9999999999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.72  E-value=4.2e-20  Score=90.47  Aligned_cols=80  Identities=15%  Similarity=0.240  Sum_probs=70.5

Q ss_pred             CceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHH
Q psy12011          6 LQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHL   80 (94)
Q Consensus         6 ~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~   80 (94)
                      ++||.|+.|++.|...+.|.     |.++++|.|..|++.|.....|..|++.+++ .+ |.|..|++.|....+|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~-~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LP-ILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-Cc-chHHHHHHHHHHHhhhHHHH
Confidence            47899999999999988887     6888999999999999999999999998876 55 99999999999999999999


Q ss_pred             HHhcCcc
Q psy12011         81 AIRHECY   87 (94)
Q Consensus        81 ~~~~~~~   87 (94)
                      +..++..
T Consensus        79 ~~~h~~~   85 (88)
T 1llm_C           79 ARLKKLV   85 (88)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            8876543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.72  E-value=1.1e-17  Score=81.39  Aligned_cols=61  Identities=15%  Similarity=0.251  Sum_probs=55.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHH-HhcCcc
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLA-IRHECY   87 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~   87 (94)
                      +...++|.|++|++.|.....|..|+++|+++++ |.|.+|++.|....+|.+|++ +|.+|.
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQV-FPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSS-EECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCc-cCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            5667889999999999999999999999999888 999999999999999999975 566553

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.71  E-value=9.9e-18  Score=75.73  Aligned_cols=57  Identities=26%  Similarity=0.596  Sum_probs=50.3

Q ss_pred             CCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         28 LNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        28 ~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      ++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|....+|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKP-YKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCC-EECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCC-cCCCCCcchhCCHHHHHHHHHHhcC
Confidence            46789999999999999999999999999888 9999999999999999999999874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.71  E-value=5.3e-18  Score=82.10  Aligned_cols=73  Identities=26%  Similarity=0.479  Sum_probs=67.5

Q ss_pred             eeec--CCCCccccchhccC-----CCCCCcccccc--chhhccChHHHHcchhhhcCCCCceeCCC---CcccccchhH
Q psy12011          8 VHFC--GLFPESFLTWSNLK-----PNLNGMFACDL--CDKEYKYKRNLYSHKKDECGQEPRFQCPQ---CSYRTKRKGN   75 (94)
Q Consensus         8 ~~~c--~~c~~~~~~~~~l~-----~~~~k~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~c~~---c~~~f~~~~~   75 (94)
                      ||.|  +.|++.|...+.|.     |.++++|.|..  |++.|.....|..|++.|.+    |.|..   |++.|....+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHHH
Confidence            6899  88999999999887     68889999988  99999999999999999988    89999   9999999999


Q ss_pred             HHHHHHHhc
Q psy12011         76 LKSHLAIRH   84 (94)
Q Consensus        76 l~~h~~~~~   84 (94)
                      |..|+++|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=4.6e-18  Score=84.74  Aligned_cols=65  Identities=22%  Similarity=0.330  Sum_probs=61.0

Q ss_pred             CCCCCccccccchhhcc-ChHHHHcchhhhcC-CCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         26 PNLNGMFACDLCDKEYK-YKRNLYSHKKDECG-QEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~-~~~~l~~h~~~~~~-~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      |.++++|.|..|++.|. ....|..|++.|.+ +++ |.|.+|++.|.....|.+|+++|+++++...
T Consensus        19 h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~-~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           19 IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA-LKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH-HSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC-EECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            78899999999999999 99999999999988 777 9999999999999999999999999998654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.2e-17  Score=79.97  Aligned_cols=67  Identities=19%  Similarity=0.339  Sum_probs=61.9

Q ss_pred             CCCCceeecCC--CCccccchhccC------CCCCCcccccc--chhhccChHHHHcchhhhcCCCCceeCCCCcccc
Q psy12011          3 SQNLQVHFCGL--FPESFLTWSNLK------PNLNGMFACDL--CDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRT   70 (94)
Q Consensus         3 ~~~~~~~~c~~--c~~~~~~~~~l~------~~~~k~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f   70 (94)
                      .+++++|.|..  |++.|.....|.      |.++++|.|..  |++.|.....|..|+++|.++++ |.|..|++.|
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~k~F   78 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEFSGPSS   78 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCCSSSCCC
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC-eeCCCCCCCC
Confidence            57889999997  999999988886      67889999999  99999999999999999999888 9999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.69  E-value=3.1e-17  Score=74.07  Aligned_cols=56  Identities=25%  Similarity=0.575  Sum_probs=53.1

Q ss_pred             ccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      ||.|..|++.|.....|..|++.|.++++ |.|..|++.|....+|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP-YHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC-EECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC-ccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68899999999999999999999999888 999999999999999999999999876

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=4.5e-18  Score=86.75  Aligned_cols=69  Identities=16%  Similarity=0.146  Sum_probs=63.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhh--hcCCCCceeCCCCcccc--cchhHHHHHHHHhcCcccCCCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKD--ECGQEPRFQCPQCSYRT--KRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~--~~~~~~~~~c~~c~~~f--~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      |+++++|.|..|++.|.....|..|++.  +.+.++++.|..|++.|  .....|..|+++|+++++|.|.+|
T Consensus        14 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C   86 (115)
T 2dmi_A           14 FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYC   86 (115)
T ss_dssp             CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSS
T ss_pred             eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCC
Confidence            7889999999999999999999999998  76667646699999998  899999999999999999999988

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.8e-17  Score=75.84  Aligned_cols=59  Identities=24%  Similarity=0.517  Sum_probs=53.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhh-h-cCCCCceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKD-E-CGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~-~-~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |+++++|.|..|++.|.....|..|++. | .++++ |.|..|++.|...++|..|++++++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~-~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-YPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC-EECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcC-eECCCCCCccCCHHHHHHHHHHHcC
Confidence            6778999999999999999999999998 6 46666 9999999999999999999999986

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.68  E-value=5.3e-18  Score=82.90  Aligned_cols=64  Identities=23%  Similarity=0.491  Sum_probs=58.5

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      +++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|++ .++.|..|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C   64 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDERKRHRDIQHI-LPILEDKV   64 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCC-ccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHH
Confidence            5799999999999999999999999999888 9999999999999999999999985 67777544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=8.2e-17  Score=76.97  Aligned_cols=64  Identities=17%  Similarity=0.366  Sum_probs=55.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcC---CCCceeCCCCcccccchhHHHHHHHH-hcCcccCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECG---QEPRFQCPQCSYRTKRKGNLKSHLAI-RHECYLDD   90 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~---~~~~~~c~~c~~~f~~~~~l~~h~~~-~~~~~~~~   90 (94)
                      |+++++|.|.+|++.|.....|..|++.|.+   +++ |.|..|++.|....+|.+|++. |.++++..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~-~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCC-EECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcc-cCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            5788999999999999999999999999986   667 9999999999999999999954 55555543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.66  E-value=1.1e-16  Score=78.12  Aligned_cols=65  Identities=23%  Similarity=0.581  Sum_probs=61.2

Q ss_pred             CCcccccc--chhhccChHHHHcchhhhcCCCCceeCC--CCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         29 NGMFACDL--CDKEYKYKRNLYSHKKDECGQEPRFQCP--QCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        29 ~k~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .++|.|..  |++.|.....|..|++.|.++++ |.|.  .|++.|.....|..|+++|+++++|.|..|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   71 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP-YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKC   71 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCC-EECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC-cCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCC
Confidence            46789998  99999999999999999999888 9997  699999999999999999999999999987

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=6.6e-17  Score=80.33  Aligned_cols=64  Identities=23%  Similarity=0.330  Sum_probs=57.3

Q ss_pred             CCCCCccccccchhhc-cChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHH-HHHhcCcccCCC
Q psy12011         26 PNLNGMFACDLCDKEY-KYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSH-LAIRHECYLDDS   91 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~-~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~~~~~~~c   91 (94)
                      +.++++|.|..|++.| .....|..|++.| ++++ |.|.+|++.|.....|..| +++|+++..+.+
T Consensus        29 ~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~-~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           29 IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM-FTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCC-CCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             hcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC-eECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            5778999999999999 9999999999999 8777 9999999999999999999 888876655443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=3.8e-17  Score=82.40  Aligned_cols=65  Identities=20%  Similarity=0.304  Sum_probs=61.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      |.++++|.|..|++.|.....|..|++.|.  ++ |.|.+|++.|.....|..|++ |+++++|.|..|
T Consensus        11 h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~-~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C   75 (107)
T 1wjp_A           11 VENKEVYQCRLCNAKLSSLLEQGSHERLCR--NA-AVCPYCSLRFFSPELKQEHES-KCEYKKLTCLEC   75 (107)
T ss_dssp             CCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HS-BCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGG
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHCC--CC-ccCCCCCCccCCHHHHHHHHH-cCCCCCccCccc
Confidence            788999999999999999999999999984  56 999999999999999999996 999999999887

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.65  E-value=4.8e-16  Score=77.29  Aligned_cols=68  Identities=24%  Similarity=0.534  Sum_probs=62.7

Q ss_pred             CCCCCcccccc--chhhccChHHHHcchhhhcCCCCceeCC--CCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         26 PNLNGMFACDL--CDKEYKYKRNLYSHKKDECGQEPRFQCP--QCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        26 ~~~~k~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      ...+++|.|..  |++.|.....|..|++.|.++++ |.|.  .|++.|.....|..|+++|+++++|.|..|
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   81 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP-YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC   81 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCC-EECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSS
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCC-eeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCC
Confidence            34567899986  99999999999999999999888 9996  699999999999999999999999999988

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=8.6e-17  Score=80.63  Aligned_cols=64  Identities=19%  Similarity=0.147  Sum_probs=57.3

Q ss_pred             CCCCceeecCCCCccccchhccC------C---CCCCccccccchhhccChHHHHcc-hhhhcCCCCceeCCCCc
Q psy12011          3 SQNLQVHFCGLFPESFLTWSNLK------P---NLNGMFACDLCDKEYKYKRNLYSH-KKDECGQEPRFQCPQCS   67 (94)
Q Consensus         3 ~~~~~~~~c~~c~~~~~~~~~l~------~---~~~k~~~c~~c~~~~~~~~~l~~h-~~~~~~~~~~~~c~~c~   67 (94)
                      .+|++||.|+.|++.|...+.|.      |   .++++|.|.+|++.|.....|..| ++.|.++++ |.|.++.
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekp-y~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEEN-FKLTMVK   86 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCC-EEEEECC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCC-eeCCccc
Confidence            46899999999999999998886      5   457899999999999999999999 899999888 9998643

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.2e-16  Score=76.27  Aligned_cols=61  Identities=21%  Similarity=0.348  Sum_probs=55.9

Q ss_pred             CCCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC   63 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c   63 (94)
                      .+.++++|.|+.|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p-~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP-SSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCC-CCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCC
Confidence            356789999999999999999887     7888999999999999999999999999999888 876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.63  E-value=6.5e-18  Score=87.74  Aligned_cols=59  Identities=19%  Similarity=0.381  Sum_probs=52.6

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      |+++++|.|..|++.|.....|..|++.|  +++ |.|..|++.|...++|.+|+++|+++.
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~-~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHT-KVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCC-CBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCC-CCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            57788999999999999999999999988  566 999999999999999999999998864

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=8.2e-16  Score=73.31  Aligned_cols=61  Identities=21%  Similarity=0.470  Sum_probs=54.6

Q ss_pred             CCCCCccccccchhhccChHHHHcchh-hhcCC-CCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKK-DECGQ-EPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~-~~~~~-~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      |+++++|.|.+|++.|.....|..|+. .|.++ ++ |.|..|++.|.....|..|++++++..
T Consensus        10 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~-~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A           10 HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK-FHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSS-EECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             cCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCc-cCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            788999999999999999999999997 56664 55 999999999999999999999877543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=4.7e-16  Score=70.80  Aligned_cols=57  Identities=21%  Similarity=0.550  Sum_probs=51.6

Q ss_pred             CccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHH-HHhcCcc
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHL-AIRHECY   87 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~-~~~~~~~   87 (94)
                      ++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+ ++|.++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP-YPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS-EECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC-ccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            579999999999999999999999999888 99999999999999999997 5676653

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=5.1e-16  Score=67.16  Aligned_cols=45  Identities=18%  Similarity=0.311  Sum_probs=42.4

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERP-HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCS-EECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCC-eeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=4.7e-16  Score=67.32  Aligned_cols=45  Identities=18%  Similarity=0.365  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKP-YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCS-EECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCC-eeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=5.3e-16  Score=67.14  Aligned_cols=45  Identities=22%  Similarity=0.353  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENP-YECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCC-EECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcC-cCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=5.1e-16  Score=67.19  Aligned_cols=45  Identities=20%  Similarity=0.347  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|.++++ |.|..|++.|....+|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERP-YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCS-EECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCC-cCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=4.7e-16  Score=67.34  Aligned_cols=45  Identities=22%  Similarity=0.354  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKH-FECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCC-EECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCC-eECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47888999888 9999999999999999999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.62  E-value=5.4e-16  Score=67.13  Aligned_cols=45  Identities=16%  Similarity=0.354  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...+.|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKP-YECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCS-CBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCc-eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.62  E-value=8.4e-16  Score=75.83  Aligned_cols=64  Identities=19%  Similarity=0.237  Sum_probs=56.7

Q ss_pred             CccccccchhhccChHHHHcchhh-hcCCCCc-------eeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKD-ECGQEPR-------FQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~-~~~~~~~-------~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      ..+.|..|++.|.....|..|++. |.++++.       |.|..|++.|.....|..|+++|+++++|.|..
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            456799999999999999999998 7664331       799999999999999999999999999999974

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=6.3e-16  Score=66.91  Aligned_cols=45  Identities=18%  Similarity=0.395  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKP-YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCS-EECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCC-EeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            57788999888 9999999999999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.62  E-value=5.3e-16  Score=67.14  Aligned_cols=45  Identities=18%  Similarity=0.338  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKR-YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCC-EECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcC-cCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=5.9e-16  Score=67.00  Aligned_cols=45  Identities=18%  Similarity=0.313  Sum_probs=42.4

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|.++++ |.|..|++.|...++|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKP-YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCS-EECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcC-eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=7.2e-16  Score=66.12  Aligned_cols=44  Identities=20%  Similarity=0.321  Sum_probs=41.0

Q ss_pred             chhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         50 HKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        50 h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      |++.|.++++ |.|..|++.|...++|..|+++|+++++|.|..|
T Consensus         1 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKP-FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCC-EECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcC-ccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5677888888 9999999999999999999999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=6.9e-16  Score=66.78  Aligned_cols=45  Identities=20%  Similarity=0.440  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKP-YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCS-EECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcC-eECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=7.3e-16  Score=66.70  Aligned_cols=45  Identities=20%  Similarity=0.381  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|.++++ |.|..|++.|...++|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKP-YICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCS-EECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcC-eECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.62  E-value=6.1e-16  Score=66.94  Aligned_cols=45  Identities=20%  Similarity=0.398  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKP-YECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCS-EECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcC-cCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47788999888 9999999999999999999999999999999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.62  E-value=5.1e-16  Score=67.17  Aligned_cols=45  Identities=20%  Similarity=0.313  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...+.|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKP-YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCS-EECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCc-eECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=5e-16  Score=67.22  Aligned_cols=45  Identities=18%  Similarity=0.375  Sum_probs=42.0

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|.++++ |.|..|++.|...++|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKP-YKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSS-CBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcC-eECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            57788889888 9999999999999999999999999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=6.3e-16  Score=66.93  Aligned_cols=45  Identities=20%  Similarity=0.381  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERP-YGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCC-EECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCC-EEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.61  E-value=6.7e-16  Score=66.83  Aligned_cols=45  Identities=20%  Similarity=0.407  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|.++++ |.|..|++.|....+|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKP-FKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCS-BCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCC-cccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47788999888 9999999999999999999999999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=8.4e-16  Score=66.46  Aligned_cols=45  Identities=18%  Similarity=0.289  Sum_probs=42.4

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|.....|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKP-YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCS-EECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCC-eECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=5.6e-16  Score=67.03  Aligned_cols=45  Identities=16%  Similarity=0.259  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKL-YNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCC-CCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCC-eECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=5.4e-16  Score=67.12  Aligned_cols=45  Identities=18%  Similarity=0.369  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKP-YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSS-EECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCC-eECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            47888999888 9999999999999999999999999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=5.3e-16  Score=67.11  Aligned_cols=45  Identities=18%  Similarity=0.403  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKP-YKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCS-SEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCC-eECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57788989888 9999999999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=5.6e-16  Score=67.10  Aligned_cols=45  Identities=18%  Similarity=0.246  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|.+|++.|...++|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKS-HQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCS-EECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCC-eECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57888989888 9999999999999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=6e-16  Score=66.97  Aligned_cols=45  Identities=20%  Similarity=0.409  Sum_probs=42.1

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKP-YKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCC-EECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCC-eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47788889888 9999999999999999999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=7.5e-16  Score=66.63  Aligned_cols=45  Identities=18%  Similarity=0.358  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...+.|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKP-YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCS-CBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCC-ccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57888889888 9999999999999999999999999999999988

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=5.7e-16  Score=75.08  Aligned_cols=68  Identities=13%  Similarity=0.258  Sum_probs=60.7

Q ss_pred             CCCCCceeecCCCCccccchhccC-----CCCC----CccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccc
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-----PNLN----GMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRT   70 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-----~~~~----k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f   70 (94)
                      .|+++++|.|..|++.|.....|.     +...    ++|.|..|++.|.....|..|++.|.++.+ +.|..|+..+
T Consensus         9 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~~~~~~~~~~   85 (86)
T 1x6h_A            9 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG-VEGENSGPSS   85 (86)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS-CCCCCCCCCC
T ss_pred             eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC-cccCCCCCCC
Confidence            578999999999999999998886     3333    789999999999999999999999999888 9999998765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.61  E-value=6e-16  Score=66.97  Aligned_cols=45  Identities=13%  Similarity=0.297  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKT-WKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCC-CCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcC-eECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.61  E-value=7.3e-16  Score=66.66  Aligned_cols=45  Identities=16%  Similarity=0.331  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|.....|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKP-YNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCS-EECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcC-eECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=1.2e-16  Score=75.30  Aligned_cols=61  Identities=10%  Similarity=0.147  Sum_probs=41.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      |.++++|.|..|++.|.....|..       +++ |.|..|++.|....+|..|+++|+++++|.|.+|
T Consensus        13 h~~~~~~~C~~C~k~f~~~~~l~~-------~~~-~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           13 HLGDRSQKCSKCGIIFIRRSTLSR-------RKT-PMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCSEEECSSSCCEEECCCCCCC-------SSS-CCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hCCCCCeeCCcccchhCCHHHhCc-------CCC-CCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            555666666666666666555443       344 7777777777777777777777777777777766

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=6e-16  Score=66.98  Aligned_cols=45  Identities=16%  Similarity=0.369  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKP-YKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSS-EECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCC-eECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57788999888 9999999999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=7.3e-16  Score=66.69  Aligned_cols=45  Identities=18%  Similarity=0.346  Sum_probs=42.0

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKP-FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCS-CCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCC-cCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47788888888 9999999999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=7.8e-16  Score=66.62  Aligned_cols=45  Identities=18%  Similarity=0.328  Sum_probs=41.9

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|.+|
T Consensus         2 ~h~~~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKP-YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSS-CBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCC-eeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            47788889888 9999999999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=8.9e-16  Score=66.42  Aligned_cols=45  Identities=16%  Similarity=0.341  Sum_probs=42.0

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKP-YKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCS-EECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcC-ccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47788889888 9999999999999999999999999999999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=8.7e-16  Score=66.41  Aligned_cols=45  Identities=18%  Similarity=0.276  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...+.|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKP-CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCS-EECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCC-eeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57788889888 9999999999999999999999999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.8e-16  Score=67.01  Aligned_cols=45  Identities=18%  Similarity=0.389  Sum_probs=42.0

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKP-FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCS-EECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCC-eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57788888888 9999999999999999999999999999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=7.1e-16  Score=66.71  Aligned_cols=45  Identities=18%  Similarity=0.297  Sum_probs=42.1

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKP-HECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCS-CBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCC-eeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57788989888 9999999999999999999999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=9.2e-16  Score=66.36  Aligned_cols=45  Identities=22%  Similarity=0.458  Sum_probs=42.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKP-FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCS-EEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCC-eeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=9.8e-16  Score=66.28  Aligned_cols=45  Identities=18%  Similarity=0.339  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|.++++ |.|..|++.|....+|..|+++|+++++|.|..|
T Consensus         2 ~h~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKP-YGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCC-EEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcC-eECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            47788999888 9999999999999999999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=7.9e-16  Score=66.59  Aligned_cols=45  Identities=20%  Similarity=0.324  Sum_probs=41.9

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|.++++ |.|..|++.|....+|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKP-FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCS-BCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCC-eECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47788889888 9999999999999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=8e-16  Score=66.54  Aligned_cols=45  Identities=13%  Similarity=0.217  Sum_probs=42.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKS-HTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSS-EECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCC-eECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57788989888 9999999999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=8.4e-16  Score=66.52  Aligned_cols=45  Identities=18%  Similarity=0.342  Sum_probs=42.0

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|.+|++.|....+|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKP-YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCS-CBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCC-cCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            47788899888 9999999999999999999999999999999988

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=6e-18  Score=79.82  Aligned_cols=62  Identities=16%  Similarity=0.192  Sum_probs=57.7

Q ss_pred             CCCCCceeecCCCCccccchhccCCCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLKPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      .|+++++|.|+.|++.|...+.|..  +++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus        12 ~h~~~~~~~C~~C~k~f~~~~~l~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~-~~C~~C   73 (73)
T 2ctu_A           12 IHLGDRSQKCSKCGIIFIRRSTLSR--RKTPMCEKCRKDSCQEAALNKDEGNESGKKT-SGPSSG   73 (73)
T ss_dssp             CCCCCSEEECSSSCCEEECCCCCCC--SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC-SSCCCC
T ss_pred             HhCCCCCeeCCcccchhCCHHHhCc--CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC-CCCCCC
Confidence            5788999999999999999998877  8899999999999999999999999999888 999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.60  E-value=1.3e-15  Score=65.95  Aligned_cols=45  Identities=20%  Similarity=0.319  Sum_probs=41.9

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|.++++ |.|..|++.|....+|..|+++|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNP-YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCS-EECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCC-eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46788889888 9999999999999999999999999999999988

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.5e-15  Score=71.69  Aligned_cols=58  Identities=28%  Similarity=0.555  Sum_probs=54.5

Q ss_pred             CCCCCccccc--cchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhc
Q psy12011         26 PNLNGMFACD--LCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        26 ~~~~k~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      +.++++|.|.  .|++.|.....|..|++.|.++++ |.|..|++.|.....|.+|+++|+
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKP-FQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC-eECCCCCchhCCHHHHHHHHHhcC
Confidence            7888999997  699999999999999999999888 999999999999999999999874

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=1.4e-15  Score=65.74  Aligned_cols=45  Identities=13%  Similarity=0.133  Sum_probs=42.0

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKS-HQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCC-EECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCC-EEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47788889888 9999999999999999999999999999999988

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=4.7e-16  Score=73.66  Aligned_cols=58  Identities=21%  Similarity=0.399  Sum_probs=53.8

Q ss_pred             CCCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCC
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      .++++++|.|..|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++++
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            467889999999999999999887     7889999999999999999999999999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=7e-16  Score=66.73  Aligned_cols=45  Identities=18%  Similarity=0.375  Sum_probs=42.1

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|.++++ |.|..|++.|....+|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKP-YKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCT-TCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcC-cCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57788999888 9999999999999999999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=1.5e-15  Score=65.64  Aligned_cols=45  Identities=18%  Similarity=0.291  Sum_probs=41.9

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|..|
T Consensus         2 ~h~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKP-FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCS-EECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCC-cCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46788888888 9999999999999999999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=1e-15  Score=66.25  Aligned_cols=45  Identities=13%  Similarity=0.311  Sum_probs=41.7

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|.+|+++|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKP-YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCS-SSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCC-cCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46788888888 9999999999999999999999999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=8.5e-16  Score=66.48  Aligned_cols=45  Identities=20%  Similarity=0.367  Sum_probs=42.1

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKP-YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCS-EEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCC-eECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            47788889888 9999999999999999999999999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=1.3e-15  Score=65.91  Aligned_cols=45  Identities=20%  Similarity=0.404  Sum_probs=41.9

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKP-YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCS-EECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCC-eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57888999888 9999999999999999999999999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=1.7e-15  Score=65.54  Aligned_cols=45  Identities=22%  Similarity=0.440  Sum_probs=41.7

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|+++|.++++ |.|..|++.|....+|.+|+++|+++++|.|.+|
T Consensus         2 ~h~~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKP-YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCS-EECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCC-eECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888888 9999999999999999999999999999999988

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=1.2e-15  Score=70.76  Aligned_cols=59  Identities=29%  Similarity=0.540  Sum_probs=53.4

Q ss_pred             CCCCccccccchhhccChHHHHcchhhhcCCCCceeCC-CCcccccchhHHHHHHHHhcCccc
Q psy12011         27 NLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCP-QCSYRTKRKGNLKSHLAIRHECYL   88 (94)
Q Consensus        27 ~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~-~c~~~f~~~~~l~~h~~~~~~~~~   88 (94)
                      -++++|.|..|++.|. ...|..|++. .++++ |.|. .|++.|...+.|..|+++|.+..+
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p-~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP-VACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSE-EECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcC-ccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4568999999999999 9999999998 88777 9999 999999999999999999987765

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.58  E-value=1.9e-15  Score=72.94  Aligned_cols=59  Identities=27%  Similarity=0.575  Sum_probs=55.3

Q ss_pred             cccc--ccchhhccChHHHHcchhhhcCCCCceeCCC--CcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         31 MFAC--DLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ--CSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        31 ~~~c--~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      ||.|  ..|++.|.....|..|++.|.++++ |.|..  |++.|.....|..|+++|++   |.|..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~   63 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKK   63 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC-EECCSTTCCCEESSHHHHHHHHHHHHS---EECCS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC-eeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCC
Confidence            5789  9999999999999999999999888 99988  99999999999999999998   77776

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.2e-15  Score=71.51  Aligned_cols=58  Identities=22%  Similarity=0.270  Sum_probs=54.0

Q ss_pred             CCCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCC
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      +++++++|.|..|++.|.....|.     |.++++|.|..|++.|.....|..|++.|+++++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            578899999999999999999887     7889999999999999999999999999998776

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=4.2e-15  Score=64.27  Aligned_cols=45  Identities=24%  Similarity=0.445  Sum_probs=41.7

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKP-FKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCS-EECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCC-EECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            47788889888 9999999999999999999999999999999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=3e-15  Score=64.92  Aligned_cols=45  Identities=16%  Similarity=0.300  Sum_probs=41.8

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHH-HhcCcccCCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLA-IRHECYLDDSANC   94 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~c~~C   94 (94)
                      .|++.|.++++ |.|..|++.|...++|..|++ +|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKP-YECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCS-BCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCC-EECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            47788889888 999999999999999999999 9999999999988

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.54  E-value=8.5e-15  Score=63.27  Aligned_cols=44  Identities=20%  Similarity=0.409  Sum_probs=40.7

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKP-FECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCS-EECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCC-EECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57888999888 999999999999999999999999999999975

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=3.2e-15  Score=70.41  Aligned_cols=57  Identities=16%  Similarity=0.160  Sum_probs=52.7

Q ss_pred             CCCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCC
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQE   58 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~   58 (94)
                      .|+++++|.|+.|++.|.....|.     |.++++|.|..|++.|.....|..|++.|.++.
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            578999999999999999999887     788999999999999999999999999998753

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=9.3e-15  Score=63.15  Aligned_cols=44  Identities=23%  Similarity=0.364  Sum_probs=40.7

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRP-YECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSS-EECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcC-cCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788999888 999999999999999999999999999999975

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1e-14  Score=63.01  Aligned_cols=44  Identities=20%  Similarity=0.388  Sum_probs=40.6

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKP-YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCS-EECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcC-eECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888888 999999999999999999999999999999975

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=8.8e-15  Score=63.20  Aligned_cols=44  Identities=16%  Similarity=0.326  Sum_probs=40.1

Q ss_pred             chhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         50 HKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        50 h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      +++.|.++++ |.|..|++.|....+|..|+++|+++++|.|..|
T Consensus         3 ~~~~h~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKP-YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCS-EECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCC-eeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3567888787 9999999999999999999999999999999988

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1.3e-14  Score=62.65  Aligned_cols=44  Identities=18%  Similarity=0.399  Sum_probs=40.6

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKP-YKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCC-EECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCC-eeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            57788889888 999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=9.3e-15  Score=63.15  Aligned_cols=44  Identities=20%  Similarity=0.357  Sum_probs=40.5

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERH-YECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCC-EECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCC-eECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788989888 999999999999999999999999999999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.1e-14  Score=62.81  Aligned_cols=44  Identities=23%  Similarity=0.407  Sum_probs=40.5

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKP-FECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCS-EECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCC-cCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888888 999999999999999999999999999999975

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.4e-14  Score=62.55  Aligned_cols=44  Identities=18%  Similarity=0.391  Sum_probs=40.6

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKP-YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCS-EECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcC-ccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57788989888 999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.2e-14  Score=62.70  Aligned_cols=44  Identities=20%  Similarity=0.390  Sum_probs=40.4

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|+++|.++++ |.|..|++.|...++|.+|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKP-YICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCS-EECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcC-EECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            57788888888 999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.52  E-value=1.4e-14  Score=61.35  Aligned_cols=42  Identities=24%  Similarity=0.417  Sum_probs=38.2

Q ss_pred             chhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCC
Q psy12011         50 HKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        50 h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      |++.|.++++ |.|..|++.|...++|.+|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENP-YECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCS-EECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCC-ccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5677888887 99999999999999999999999999999985

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.6e-14  Score=62.32  Aligned_cols=44  Identities=18%  Similarity=0.344  Sum_probs=40.5

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERH-YECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCC-EECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCC-CCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            47788989888 999999999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.4e-14  Score=62.61  Aligned_cols=44  Identities=20%  Similarity=0.407  Sum_probs=40.7

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|.....|.+|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKP-YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCC-EECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCC-EECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            57888989888 999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1e-14  Score=62.98  Aligned_cols=44  Identities=18%  Similarity=0.390  Sum_probs=40.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|...++|.+|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKP-YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCS-CBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcC-eECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            57788888888 999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.5e-14  Score=62.52  Aligned_cols=44  Identities=20%  Similarity=0.442  Sum_probs=40.5

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKP-YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCS-EEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCC-eECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57788989888 999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.4e-14  Score=62.53  Aligned_cols=44  Identities=23%  Similarity=0.443  Sum_probs=40.5

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKP-YRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCC-EECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCC-eECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57788889888 999999999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.4e-14  Score=62.57  Aligned_cols=44  Identities=20%  Similarity=0.428  Sum_probs=40.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKP-YECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCS-SCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCC-cCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57788888888 999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.4e-14  Score=62.56  Aligned_cols=44  Identities=25%  Similarity=0.496  Sum_probs=40.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|...++|.+|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKP-FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSS-BCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcC-CCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57788888887 999999999999999999999999999999974

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.4e-15  Score=63.29  Aligned_cols=43  Identities=16%  Similarity=0.309  Sum_probs=39.5

Q ss_pred             hhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         51 KKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        51 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      ++.|.++++ |.|.+|++.|....+|..|+++|+++++|.|..|
T Consensus         4 ~~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKP-YQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCT-TCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCC-eeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788787 9999999999999999999999999999999988

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.4e-14  Score=62.60  Aligned_cols=44  Identities=14%  Similarity=0.323  Sum_probs=40.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|.+|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKC-YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCC-CBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCC-eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788888888 999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.3e-14  Score=62.70  Aligned_cols=44  Identities=18%  Similarity=0.380  Sum_probs=40.0

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKP-YQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCS-SSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCC-eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57788888888 999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.1e-14  Score=62.00  Aligned_cols=44  Identities=18%  Similarity=0.343  Sum_probs=40.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|+++|.++++ |.|..|++.|....+|..|+++|+++++|.|..
T Consensus         2 ~h~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKL-FKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCC-CBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCC-EECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788888888 999999999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.51  E-value=9e-15  Score=65.31  Aligned_cols=52  Identities=23%  Similarity=0.347  Sum_probs=47.1

Q ss_pred             hhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCC
Q psy12011         38 DKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDD   90 (94)
Q Consensus        38 ~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   90 (94)
                      ++.|.....|..|++.|.++++ |.|..|++.|...++|..|+++|+++++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQP-ATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCC-EECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCC-ccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4567777888999999999888 999999999999999999999999999984

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.6e-14  Score=62.38  Aligned_cols=44  Identities=18%  Similarity=0.425  Sum_probs=40.1

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|.+|++.|....+|.+|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKP-YECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCS-CCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCC-cCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46788888888 999999999999999999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2.2e-14  Score=61.29  Aligned_cols=43  Identities=23%  Similarity=0.379  Sum_probs=39.8

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKP-YECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCS-EECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCC-eECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            47788889888 99999999999999999999999999999985

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.5e-14  Score=62.41  Aligned_cols=44  Identities=25%  Similarity=0.391  Sum_probs=40.1

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENP-FICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCS-CBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCC-EECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888887 999999999999999999999999999999974

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.50  E-value=1.1e-14  Score=70.73  Aligned_cols=55  Identities=22%  Similarity=0.386  Sum_probs=49.0

Q ss_pred             CCCCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcch-hhhcCC
Q psy12011          3 SQNLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHK-KDECGQ   57 (94)
Q Consensus         3 ~~~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~-~~~~~~   57 (94)
                      +.+.++|+|++|++.|...+.|.     |++++||.|..|++.|.....|..|+ +.|.++
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            45668899999999999999998     79999999999999999999999997 457654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.3e-14  Score=62.70  Aligned_cols=44  Identities=18%  Similarity=0.400  Sum_probs=40.1

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKP-YKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCT-TCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcC-eECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            47788888888 999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.6e-14  Score=62.35  Aligned_cols=44  Identities=20%  Similarity=0.450  Sum_probs=40.3

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKP-YKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCC-CCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCC-eECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57788888888 999999999999999999999999999999974

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=6.1e-15  Score=68.24  Aligned_cols=55  Identities=20%  Similarity=0.317  Sum_probs=50.2

Q ss_pred             CCCCCceeecCCCCccccchhccC------C-CCCCccccccchhhccChHHHHcchhhhcC
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK------P-NLNGMFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~------~-~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      .|+++++|.|+.|++.|...+.|.      | .++++|.|+.|++.|.....|..|++.+++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            578999999999999999999886      4 578999999999999999999999998865

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=2.9e-14  Score=60.96  Aligned_cols=43  Identities=21%  Similarity=0.368  Sum_probs=39.6

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      +|+++|.++++ |.|..|++.|....+|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENP-FKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCS-EECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCC-eECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            57788889888 99999999999999999999999999999984

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.9e-14  Score=62.14  Aligned_cols=44  Identities=16%  Similarity=0.376  Sum_probs=39.5

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|.+|++.|....+|.+|+++|+++++|.|++
T Consensus         2 ~h~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKP-YKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCS-CBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcc-cCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            36778888887 999999999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=3e-14  Score=60.27  Aligned_cols=42  Identities=17%  Similarity=0.348  Sum_probs=37.9

Q ss_pred             chhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCC
Q psy12011         50 HKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        50 h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      |+++|.++++ |.|..|++.|...++|.+|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKP-YSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCS-CBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCC-eECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5667888887 99999999999999999999999999999983

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.7e-14  Score=61.11  Aligned_cols=42  Identities=21%  Similarity=0.487  Sum_probs=37.7

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      .|+++|.++++ |.|..|++.|...++|..|+++|+++++|.|
T Consensus         1 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKP-YRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCS-BCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCC-eeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            36778888887 9999999999999999999999999999987

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2e-14  Score=61.42  Aligned_cols=43  Identities=21%  Similarity=0.300  Sum_probs=39.5

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      .|++.|.++++ |.|..|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKP-YVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSS-SCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcC-eECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            57788888888 99999999999999999999999999999985

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.3e-14  Score=61.87  Aligned_cols=44  Identities=23%  Similarity=0.495  Sum_probs=40.4

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|+++++|.|..
T Consensus         2 ~h~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERP-FKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCS-CCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCC-eECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788889888 999999999999999999999999999999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.1e-14  Score=61.99  Aligned_cols=44  Identities=23%  Similarity=0.411  Sum_probs=40.4

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|+++|.++++ |.|..|++.|....+|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en3_A            2 SSGSSGTGEKP-FQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCS-EECSSSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred             ccccccCCCCC-eeCcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57888989888 999999999999999999999999999999963

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=3.8e-14  Score=60.61  Aligned_cols=43  Identities=14%  Similarity=0.215  Sum_probs=39.6

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      .|++.|.++++ |.|..|++.|...++|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKR-YECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSS-EECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCC-eECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            57788888887 99999999999999999999999999999985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.7e-14  Score=60.45  Aligned_cols=41  Identities=20%  Similarity=0.467  Sum_probs=38.0

Q ss_pred             chhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         50 HKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        50 h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      |+++|.++++ |.|..|++.|....+|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKP-YKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCS-EECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCC-EeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            6778888888 9999999999999999999999999999987

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.48  E-value=4.8e-15  Score=76.85  Aligned_cols=90  Identities=11%  Similarity=0.018  Sum_probs=67.3

Q ss_pred             CCCCCCceeecCCCCcc--ccchhc----cCCCCCCccccccchhhcc------ChHHHHcchhhhcCCCCceeCCCCcc
Q psy12011          1 MSSQNLQVHFCGLFPES--FLTWSN----LKPNLNGMFACDLCDKEYK------YKRNLYSHKKDECGQEPRFQCPQCSY   68 (94)
Q Consensus         1 ~~~~~~~~~~c~~c~~~--~~~~~~----l~~~~~k~~~c~~c~~~~~------~~~~l~~h~~~~~~~~~~~~c~~c~~   68 (94)
                      +.+.|.++|.|...+..  |.....    +....++.+.|+.|++.|.      ....|..|+ .|.++++ |.|..|++
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~-~~C~~C~k   82 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQ-FVCPLCLM   82 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEECCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCS-EECTTTCC
T ss_pred             hhcccccccccccCCeeeeecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCC-eECCCCCc
Confidence            35778899988775533  322221    1134456778888887776      456666665 6778787 99999999


Q ss_pred             cccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         69 RTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        69 ~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|....+|..|+++|  +++|.|..|
T Consensus        83 ~f~~~~~l~~H~~~H--~~~~~C~~C  106 (129)
T 2wbt_A           83 PFSSSVSLKQHIRYT--EHTKVCPVC  106 (129)
T ss_dssp             EESSHHHHHHHHHHT--CCCCBCTTT
T ss_pred             ccCCHhHHHHHHHHC--CCCCCCCCC
Confidence            999999999999998  899999988

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=3.3e-14  Score=61.37  Aligned_cols=44  Identities=18%  Similarity=0.235  Sum_probs=40.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcC-cccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE-CYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~-~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|....+|..|+++|++ +++|.|.+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKC-FKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCC-EECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCC-EECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            47788888888 9999999999999999999999999 99999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.3e-14  Score=61.37  Aligned_cols=44  Identities=16%  Similarity=0.372  Sum_probs=39.2

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|.+|++.|....+|..|+++|+++++|.|..
T Consensus         2 ~h~~~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKP-YECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSS-CBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCC-cCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36678888887 999999999999999999999999999999974

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.47  E-value=9e-15  Score=65.79  Aligned_cols=52  Identities=15%  Similarity=0.222  Sum_probs=44.4

Q ss_pred             CCceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcC
Q psy12011          5 NLQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus         5 ~~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      |+++|.|+.|++.|.....|.     |+++++|.|..|++.|.....|..|++.|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            578999999999999999987     6889999999999999999999999998753

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.47  E-value=4.6e-14  Score=59.70  Aligned_cols=41  Identities=20%  Similarity=0.389  Sum_probs=37.8

Q ss_pred             chhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         50 HKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        50 h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      |++.|.++++ |.|..|++.|...++|..|+++|+++++|.|
T Consensus         2 H~~~H~~~~~-~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETP-YLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCC-EECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCC-eECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            5677888887 9999999999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.8e-14  Score=61.57  Aligned_cols=44  Identities=23%  Similarity=0.442  Sum_probs=40.0

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .|++.|.++++ |.|..|++.|.....|..|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKP-YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCS-SEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCC-eECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888887 999999999999999999999999999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.6e-14  Score=61.09  Aligned_cols=43  Identities=26%  Similarity=0.386  Sum_probs=39.5

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      .|+++|.++++ |.|..|++.|....+|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENP-YECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCS-CEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcC-eeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            47788999888 99999999999999999999999999999985

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.2e-14  Score=67.28  Aligned_cols=58  Identities=19%  Similarity=0.262  Sum_probs=51.0

Q ss_pred             CCCCCceeecCCCCccccchhccC------CCCC-CccccccchhhccChHHHHcchhhhcCCCC
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK------PNLN-GMFACDLCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~------~~~~-k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      .|+++++|.|+.|++.|.....|.      |.++ ++|.|..|++.|.....|..|++.+++...
T Consensus         9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            9 THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            578999999999999999999887      4543 899999999999999999999998776544

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=5.7e-14  Score=60.06  Aligned_cols=43  Identities=16%  Similarity=0.196  Sum_probs=39.0

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      .|++.|.++++ |.|.+|++.|....+|..|+++|+++++|.|.
T Consensus         2 ~h~~~h~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTT-SECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCC-CCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcC-eECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            46778888887 99999999999999999999999999999985

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.9e-14  Score=61.00  Aligned_cols=44  Identities=20%  Similarity=0.444  Sum_probs=40.0

Q ss_pred             chhhhcCCCCceeCC--CCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         50 HKKDECGQEPRFQCP--QCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        50 h~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      +.+.|.++++ |.|.  .|++.|.....|..|+++|+++++|+|..|
T Consensus         3 ~~~~H~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKP-FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCC-EECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCC-eECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567888787 9998  899999999999999999999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.46  E-value=7.1e-14  Score=60.03  Aligned_cols=41  Identities=24%  Similarity=0.571  Sum_probs=35.3

Q ss_pred             hhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         53 DECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        53 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|.++++ |.|.+|++.|.....|..|+++|+++++|.|+.|
T Consensus         4 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            4 GSSGEKP-YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCSSCCS-SEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CcCCCCC-CcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            4667677 9999999999999999999999999999999887

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=3.7e-14  Score=60.05  Aligned_cols=41  Identities=27%  Similarity=0.483  Sum_probs=37.7

Q ss_pred             chhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         50 HKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        50 h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      |++.|.++++ |.|..|++.|...++|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKP-YPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCC-BCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCC-EECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            6678888888 9999999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.2e-14  Score=60.45  Aligned_cols=42  Identities=19%  Similarity=0.251  Sum_probs=38.5

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      .|+++|.++++ |.|.+|++.|....+|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKS-YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCC-EEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCC-eECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            47788888888 9999999999999999999999999999988

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.45  E-value=1.2e-13  Score=64.81  Aligned_cols=57  Identities=26%  Similarity=0.535  Sum_probs=52.0

Q ss_pred             CCCCCcccccc--chhhccChHHHHcchhhhcCCCCceeCCC--CcccccchhHHHHHHHHh
Q psy12011         26 PNLNGMFACDL--CDKEYKYKRNLYSHKKDECGQEPRFQCPQ--CSYRTKRKGNLKSHLAIR   83 (94)
Q Consensus        26 ~~~~k~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~   83 (94)
                      ....++|.|..  |++.|.....|..|++.|.++++ |.|..  |++.|.....|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS-EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCC-ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            56778999988  99999999999999999999888 99965  999999999999998865

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=7.5e-15  Score=73.01  Aligned_cols=58  Identities=22%  Similarity=0.307  Sum_probs=53.2

Q ss_pred             CCCCCceeecCCCCcccc-chhccC-----CCC-CCccccccchhhccChHHHHcchhhhcCCCC
Q psy12011          2 SSQNLQVHFCGLFPESFL-TWSNLK-----PNL-NGMFACDLCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~-~~~~l~-----~~~-~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      .|+++++|.|..|++.|. ....|.     |++ +++|.|..|++.|.....|..|++.|+++++
T Consensus        18 ~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           18 AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            478899999999999999 888887     566 8899999999999999999999999999877

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.43  E-value=6.1e-14  Score=63.01  Aligned_cols=51  Identities=24%  Similarity=0.270  Sum_probs=47.4

Q ss_pred             eeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCC
Q psy12011          8 VHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQE   58 (94)
Q Consensus         8 ~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~   58 (94)
                      ||.|+.|++.|...+.|.     |.++++|.|..|++.|.....|..|++.|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            689999999999999987     789999999999999999999999999998764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1.4e-13  Score=59.33  Aligned_cols=42  Identities=14%  Similarity=0.230  Sum_probs=37.5

Q ss_pred             hhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         51 KKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        51 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      ++.|.++++ |.|..|++.|....+|..|+++|+++++|.|.+
T Consensus         4 ~~~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERG-HRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSS-CCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCC-cCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            466778777 999999999999999999999999999999974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.4e-13  Score=58.80  Aligned_cols=42  Identities=21%  Similarity=0.307  Sum_probs=38.6

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      .|+++|.++++ |.|.+|++.|...+.|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKP-YECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCS-EECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcC-eECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            47788888888 9999999999999999999999999999987

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=5.1e-14  Score=67.10  Aligned_cols=58  Identities=14%  Similarity=0.217  Sum_probs=50.0

Q ss_pred             CCCCCceeecCCCCccccchhccC-----CC---CCCccccccchhhccChHHHHcchh-hhcCCCC
Q psy12011          2 SSQNLQVHFCGLFPESFLTWSNLK-----PN---LNGMFACDLCDKEYKYKRNLYSHKK-DECGQEP   59 (94)
Q Consensus         2 ~~~~~~~~~c~~c~~~~~~~~~l~-----~~---~~k~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~   59 (94)
                      .|+++++|.|..|++.|.....|.     |.   ++++|.|..|++.|.....|..|++ .|.+..+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            478999999999999999999987     44   3899999999999999999999995 4555444

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=2.2e-13  Score=57.97  Aligned_cols=41  Identities=24%  Similarity=0.419  Sum_probs=36.2

Q ss_pred             hhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         52 KDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        52 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      +.|.++++ |.|..|++.|....+|..|+++|+++++|.|.+
T Consensus         3 ~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGA-FFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCC-BCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCC-EECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            35677777 999999999999999999999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.3e-13  Score=59.14  Aligned_cols=43  Identities=30%  Similarity=0.526  Sum_probs=37.5

Q ss_pred             chhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         50 HKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        50 h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      +.+.|.++++ |.|..|++.|....+|..|+++|+++++|.|..
T Consensus         3 ~~~~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKP-FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCS-EEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcC-ccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3456778777 999999999999999999999999999999964

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.41  E-value=2.7e-13  Score=58.98  Aligned_cols=40  Identities=13%  Similarity=0.067  Sum_probs=28.7

Q ss_pred             hcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         54 ECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        54 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      +.++++ |.|.+|++.|.....|.+|+++|+++++|.|.+|
T Consensus         7 ~~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (48)
T 2epr_A            7 GRTRKQ-VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS   46 (48)
T ss_dssp             CCCCCS-EEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCC
T ss_pred             CCCCcC-eeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCC
Confidence            344455 7777777777777777777777777777777766

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=3.8e-13  Score=56.57  Aligned_cols=39  Identities=23%  Similarity=0.461  Sum_probs=34.5

Q ss_pred             hhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         52 KDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        52 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      +.|.++++ |.|..|++.|....+|..|+++|+++++|.|
T Consensus         3 ~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRV-YECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCC-EECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCC-eECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            35677777 9999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.38  E-value=3.1e-13  Score=60.23  Aligned_cols=46  Identities=17%  Similarity=0.391  Sum_probs=35.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchh-hhcCCCCceeCCCCcccccc
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKK-DECGQEPRFQCPQCSYRTKR   72 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~~~~c~~c~~~f~~   72 (94)
                      +.++++|.|.+|++.|.....|..|++ .|.++++ |.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~-~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCC-ccCCCCCCCCCC
Confidence            566778888888888888888888876 7777776 888888887764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=7.4e-13  Score=65.63  Aligned_cols=53  Identities=17%  Similarity=0.214  Sum_probs=47.7

Q ss_pred             hccChHHHHcchhhhcCCCCceeCCCCcccc-cchhHHHHHHHHhcCcccCCCCCC
Q psy12011         40 EYKYKRNLYSHKKDECGQEPRFQCPQCSYRT-KRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        40 ~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f-~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|.....+..|+..+.++++ |.|..|++.| ....+|..|+++| ++++|.|.+|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~-~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~C   68 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGS-VSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHC   68 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSC-EECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSS
T ss_pred             CCCCchHHHHHHHHhcCCCC-cCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCC
Confidence            45566778888888888787 9999999999 9999999999999 9999999988

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=4.5e-13  Score=60.73  Aligned_cols=51  Identities=22%  Similarity=0.492  Sum_probs=45.8

Q ss_pred             ceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcch-hhhcCC
Q psy12011          7 QVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHK-KDECGQ   57 (94)
Q Consensus         7 ~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~-~~~~~~   57 (94)
                      ++|.|+.|++.|...+.|.     |+++++|.|..|++.|.....|..|+ ..|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5899999999999999887     78899999999999999999999996 667653

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.32  E-value=1.1e-12  Score=57.01  Aligned_cols=42  Identities=24%  Similarity=0.472  Sum_probs=39.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcc
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSY   68 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~   68 (94)
                      +.++++|.|.+|++.|.....|..|+++|.++++ |.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKP-YSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCC-CCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCC-ccCCCCCC
Confidence            6788999999999999999999999999999888 99999985

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.32  E-value=1.1e-12  Score=64.48  Aligned_cols=58  Identities=17%  Similarity=0.071  Sum_probs=50.5

Q ss_pred             ceeecCCCCccccchhccC------CCCCCc--------cccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011          7 QVHFCGLFPESFLTWSNLK------PNLNGM--------FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus         7 ~~~~c~~c~~~~~~~~~l~------~~~~k~--------~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      ..+.|+.|++.|.....|.      |.++++        |.|..|++.|.....|..|+++|.++++ |.|.+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   95 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS-GPSSG   95 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC-CSSCC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            3467999999999988886      566666        8999999999999999999999999888 99863

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.31  E-value=1.2e-12  Score=56.03  Aligned_cols=42  Identities=17%  Similarity=0.333  Sum_probs=38.5

Q ss_pred             CCCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCc
Q psy12011         25 KPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCS   67 (94)
Q Consensus        25 ~~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~   67 (94)
                      .|+++++|.|..|++.|.....|..|++.|.++++ |.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG-KSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCC-CCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCC-CCCcCCC
Confidence            37888999999999999999999999999999888 9999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=5.7e-13  Score=62.64  Aligned_cols=54  Identities=15%  Similarity=0.308  Sum_probs=48.8

Q ss_pred             CCCCCceeecC--CCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhc
Q psy12011          2 SSQNLQVHFCG--LFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus         2 ~~~~~~~~~c~--~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~   55 (94)
                      .+.++++|.|+  .|++.|.....|.     |.++++|.|..|++.|.....|..|++.|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            46788999997  5999999999887     688999999999999999999999998763

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=2.6e-12  Score=57.17  Aligned_cols=41  Identities=15%  Similarity=0.317  Sum_probs=37.3

Q ss_pred             hhcCCCCceeCCCCcccccchhHHHHHHH-HhcCcccCCCCCC
Q psy12011         53 DECGQEPRFQCPQCSYRTKRKGNLKSHLA-IRHECYLDDSANC   94 (94)
Q Consensus        53 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~c~~C   94 (94)
                      .+.++++ |.|.+|++.|.....|.+|++ +|+++++|.|.+|
T Consensus         6 ~~~~~k~-~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C   47 (54)
T 2eps_A            6 SGSVGKP-YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW   47 (54)
T ss_dssp             CCCSSCC-EECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSS
T ss_pred             CCCCCCC-eECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCC
Confidence            4566677 999999999999999999997 8999999999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.8e-12  Score=55.11  Aligned_cols=40  Identities=18%  Similarity=0.332  Sum_probs=37.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytn_A            7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC-CSCCCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=3.3e-12  Score=54.91  Aligned_cols=40  Identities=20%  Similarity=0.388  Sum_probs=37.4

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2elz_A            7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT-SGPSSG   46 (46)
T ss_dssp             CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC-CCSCCC
T ss_pred             CCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3.6e-12  Score=54.76  Aligned_cols=40  Identities=23%  Similarity=0.413  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytg_A            7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCS-SCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.27  E-value=3.7e-12  Score=54.74  Aligned_cols=40  Identities=18%  Similarity=0.276  Sum_probs=37.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em0_A            7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKP-SGPSSG   46 (46)
T ss_dssp             SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC-SCSSCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCC-cCCCCC
Confidence            7889999999999999999999999999999888 999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3.4e-12  Score=54.84  Aligned_cols=40  Identities=18%  Similarity=0.420  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eml_A            7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP-SGPSSG   46 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCC-SCSSCC
T ss_pred             cCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.6e-12  Score=54.76  Aligned_cols=40  Identities=23%  Similarity=0.487  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2em7_A            7 GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCC-SSTTCC
T ss_pred             CCCCcCccCCCccchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.27  E-value=3.4e-12  Score=54.80  Aligned_cols=40  Identities=20%  Similarity=0.389  Sum_probs=37.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2el4_A            7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP-SGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCC-SCCTTC
T ss_pred             CCCCCceECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.5e-12  Score=54.79  Aligned_cols=40  Identities=18%  Similarity=0.337  Sum_probs=37.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eoe_A            7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCS-CSSCCC
T ss_pred             CCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=3e-12  Score=54.53  Aligned_cols=40  Identities=20%  Similarity=0.409  Sum_probs=36.6

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   44 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP-SGPSSG   44 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCS-CSCCCC
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7788999999999999999999999999999888 999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.7e-12  Score=54.71  Aligned_cols=40  Identities=20%  Similarity=0.311  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epz_A            7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC-CSSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.26  E-value=3.5e-12  Score=54.78  Aligned_cols=40  Identities=20%  Similarity=0.365  Sum_probs=37.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ema_A            7 GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCC-CSSSCC
T ss_pred             CCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.7e-12  Score=54.70  Aligned_cols=40  Identities=18%  Similarity=0.382  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eq4_A            7 GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC-CCCCCC
T ss_pred             CCCCCCeECCCCCCccCchHHHHHHHHhcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.26  E-value=3.5e-12  Score=54.84  Aligned_cols=40  Identities=18%  Similarity=0.377  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emk_A            7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC-SSCCCC
T ss_pred             cCCCCceECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.5e-12  Score=54.85  Aligned_cols=40  Identities=25%  Similarity=0.386  Sum_probs=37.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emf_A            7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSC-SCCCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7888999999999999999999999999999888 999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.26  E-value=3.6e-12  Score=54.81  Aligned_cols=40  Identities=23%  Similarity=0.335  Sum_probs=37.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ely_A            7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS-CSCCCC
T ss_pred             CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.3e-12  Score=54.88  Aligned_cols=40  Identities=18%  Similarity=0.321  Sum_probs=37.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2eq0_A            7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKP-SGPSSG   46 (46)
T ss_dssp             TTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCC-SCCSCC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7888999999999999999999999999999888 999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.6e-12  Score=54.72  Aligned_cols=40  Identities=18%  Similarity=0.361  Sum_probs=37.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytr_A            7 GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC-CCSCCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.4e-12  Score=54.83  Aligned_cols=40  Identities=23%  Similarity=0.445  Sum_probs=37.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emy_A            7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCC-SCSSCC
T ss_pred             CCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7888999999999999999999999999999888 999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.3e-12  Score=54.88  Aligned_cols=40  Identities=18%  Similarity=0.353  Sum_probs=37.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ene_A            7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCC-CSCCCC
T ss_pred             CCCCCCeECCCCCchhCChHHHHHHHhhcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.9e-12  Score=54.65  Aligned_cols=40  Identities=20%  Similarity=0.404  Sum_probs=37.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ep2_A            7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCS-CCSCCC
T ss_pred             CCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.8e-12  Score=54.74  Aligned_cols=40  Identities=18%  Similarity=0.266  Sum_probs=37.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytm_A            7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP-SGPSSG   46 (46)
T ss_dssp             CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC-CCCCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4.5e-12  Score=54.43  Aligned_cols=40  Identities=20%  Similarity=0.329  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH-SGPSSG   46 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS-CCSCCC
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.5e-12  Score=54.79  Aligned_cols=40  Identities=18%  Similarity=0.318  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emm_A            7 GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCT-TSSSCC
T ss_pred             cCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.26  E-value=4.3e-12  Score=54.53  Aligned_cols=40  Identities=18%  Similarity=0.301  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2el6_A            7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP-SGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSC-CSCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.26  E-value=4.5e-12  Score=54.40  Aligned_cols=40  Identities=18%  Similarity=0.427  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em9_A            7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC-CSTTCC
T ss_pred             CCCCcCeECCccccccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.3e-12  Score=54.54  Aligned_cols=40  Identities=20%  Similarity=0.365  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|.+|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytq_A            7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS-SCCCCC
T ss_pred             cCCCCCcCCCccChhhCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4e-12  Score=54.63  Aligned_cols=40  Identities=20%  Similarity=0.338  Sum_probs=37.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoq_A            7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP-SGPSSG   46 (46)
T ss_dssp             SSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS-SSCCCC
T ss_pred             CCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7888999999999999999999999999999888 999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.3e-12  Score=54.47  Aligned_cols=40  Identities=18%  Similarity=0.367  Sum_probs=37.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eop_A            7 GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENP-SGPSSG   46 (46)
T ss_dssp             CCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC-SCCCCC
T ss_pred             cCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999887 999876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.25  E-value=4.6e-13  Score=61.31  Aligned_cols=47  Identities=13%  Similarity=0.294  Sum_probs=33.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHH
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNL   76 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l   76 (94)
                      |+++++|.|..|++.|.....|.   +.|.++++ |.|..|++.|....++
T Consensus         9 H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~-~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            9 STNRASFKCPVCSSTFTDLEANQ---LFDPMTGT-FRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH---HEETTTTE-EBCSSSCCBCEECTTC
T ss_pred             cCCCCCccCCCCCchhccHHHhH---hhcCCCCC-EECCCCCCccccCccc
Confidence            66777777777777777766665   56777666 8888888887765543

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4.3e-12  Score=54.51  Aligned_cols=40  Identities=15%  Similarity=0.141  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|.+|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2yso_A            7 GSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKN-SGPSSG   46 (46)
T ss_dssp             SSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSC-CCTTCC
T ss_pred             cCCCCCEEccccChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7888999999999999999999999999999888 999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4e-12  Score=54.60  Aligned_cols=40  Identities=23%  Similarity=0.461  Sum_probs=37.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|.+|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2enc_A            7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSC-CSSCCC
T ss_pred             CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.7e-12  Score=54.71  Aligned_cols=40  Identities=18%  Similarity=0.301  Sum_probs=37.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|.+|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emp_A            7 GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSC-CSCCCC
T ss_pred             cCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.5e-12  Score=54.81  Aligned_cols=40  Identities=15%  Similarity=0.271  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|+.|++.|...+.|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoo_A            7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS-SGPSSG   46 (46)
T ss_dssp             CSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTS-SCCSCC
T ss_pred             CCCCCCEEccccCcccCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.9e-12  Score=54.33  Aligned_cols=40  Identities=23%  Similarity=0.420  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|.+|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2en1_A            7 GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCC-SCCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.4e-12  Score=54.84  Aligned_cols=40  Identities=18%  Similarity=0.350  Sum_probs=37.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2yu8_A            7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCC-SCSCCC
T ss_pred             CCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.1e-12  Score=54.24  Aligned_cols=40  Identities=20%  Similarity=0.424  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|+.|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eme_A            7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             TCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSC-CSSCCC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            7888999999999999999999999999999888 999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.6e-12  Score=54.41  Aligned_cols=40  Identities=18%  Similarity=0.346  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytd_A            7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP-SGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCS-SCSSCC
T ss_pred             cCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.5e-12  Score=54.80  Aligned_cols=40  Identities=23%  Similarity=0.435  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emh_A            7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSC-SSSCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=3.9e-12  Score=54.67  Aligned_cols=40  Identities=18%  Similarity=0.375  Sum_probs=37.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|.+|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em5_A            7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCC-SSCCCC
T ss_pred             CCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7888999999999999999999999999999888 999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4e-12  Score=54.60  Aligned_cols=40  Identities=18%  Similarity=0.328  Sum_probs=37.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~c   46 (46)
T 2ytk_A            7 GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSC-SSCCCC
T ss_pred             CCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.4e-12  Score=54.51  Aligned_cols=40  Identities=20%  Similarity=0.278  Sum_probs=37.4

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |.++++|.|.+|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em8_A            7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL-SGPSSG   46 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCC-CCSCCC
T ss_pred             CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.6e-12  Score=54.40  Aligned_cols=40  Identities=15%  Similarity=0.248  Sum_probs=37.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epw_A            7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH-SGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCC-SCCCCC
T ss_pred             CCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7888999999999999999999999999999888 999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.8e-12  Score=54.35  Aligned_cols=40  Identities=23%  Similarity=0.355  Sum_probs=36.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ytj_A            7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP-SGPSSG   46 (46)
T ss_dssp             TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCC-SSCSCC
T ss_pred             CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999875

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.8e-12  Score=54.67  Aligned_cols=40  Identities=28%  Similarity=0.407  Sum_probs=37.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ysp_A            7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP-SGPSSG   46 (46)
T ss_dssp             CSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCS-SCCSCC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4e-12  Score=54.60  Aligned_cols=40  Identities=20%  Similarity=0.412  Sum_probs=37.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en6_A            7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCC-SSSCCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.24  E-value=9.9e-12  Score=51.56  Aligned_cols=37  Identities=11%  Similarity=0.249  Sum_probs=31.3

Q ss_pred             hcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCC
Q psy12011         54 ECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDS   91 (94)
Q Consensus        54 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   91 (94)
                      |.++++ |.|..|++.|...++|..|+++|+++++|.+
T Consensus         1 h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRS-YTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSS-EECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCc-eECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            345566 9999999999999999999999999999876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.7e-12  Score=59.96  Aligned_cols=56  Identities=20%  Similarity=0.358  Sum_probs=48.8

Q ss_pred             CCCCceeecCCCCccccchhccC-C---CCCCccccc-cchhhccChHHHHcchhhhcCCCC
Q psy12011          3 SQNLQVHFCGLFPESFLTWSNLK-P---NLNGMFACD-LCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus         3 ~~~~~~~~c~~c~~~~~~~~~l~-~---~~~k~~~c~-~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      .-++++|.|..|++.|. .+.|. |   +++++|.|. .|++.|...+.|..|++.|....+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            35789999999999999 88876 3   788999999 999999999999999998876544

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=5.3e-12  Score=54.19  Aligned_cols=40  Identities=20%  Similarity=0.299  Sum_probs=36.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|+.|++.|.....|..|++.|.++++ |.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en8_A            7 GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC-SGPSSG   46 (46)
T ss_dssp             CCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCS-SCCSCC
T ss_pred             CCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7888999999999999999999999999999887 999876

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.3e-12  Score=53.98  Aligned_cols=41  Identities=22%  Similarity=0.500  Sum_probs=37.6

Q ss_pred             CCCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         25 KPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        25 ~~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      .|+++++|.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCC-CSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            37889999999999999999999999999999888 999876

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.1e-12  Score=54.61  Aligned_cols=40  Identities=15%  Similarity=0.210  Sum_probs=37.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP-SGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC-CSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=8.5e-12  Score=53.55  Aligned_cols=40  Identities=23%  Similarity=0.455  Sum_probs=36.6

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~   46 (46)
T 2ep3_A            7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCC-CCTTCC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1.1e-11  Score=50.78  Aligned_cols=36  Identities=19%  Similarity=0.397  Sum_probs=31.0

Q ss_pred             hhhcCCCCceeCCCCcccccchhHHHHHHHHhcCccc
Q psy12011         52 KDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYL   88 (94)
Q Consensus        52 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   88 (94)
                      +.|.++++ |.|..|++.|...++|..|+++|++++|
T Consensus         2 ~~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRS-YSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCC-CEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCC-cCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            45677777 9999999999999999999999998875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=9.4e-12  Score=53.59  Aligned_cols=40  Identities=18%  Similarity=0.282  Sum_probs=37.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchh-hhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKK-DECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++ .|.++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~-~~C~~C   47 (47)
T 2epx_A            7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP-SGPSSG   47 (47)
T ss_dssp             CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS-SSCCCC
T ss_pred             cCCCCCEECCccCchhCChHHHHHHhHhhcCCCCC-CCCCCC
Confidence            788999999999999999999999999 9999887 999876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.21  E-value=1.6e-12  Score=59.46  Aligned_cols=44  Identities=16%  Similarity=0.290  Sum_probs=39.1

Q ss_pred             HHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         47 LYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        47 l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      |..|++.|.++++ |.|..|++.|.....|.   ++|+++++|.|..|
T Consensus         2 L~~h~~~H~~~k~-~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C   45 (62)
T 1vd4_A            2 IETDERDSTNRAS-FKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFC   45 (62)
T ss_dssp             CCCCSSSCCSSSE-EECSSSCCEEEHHHHHH---HEETTTTEEBCSSS
T ss_pred             hhhHHHHcCCCCC-ccCCCCCchhccHHHhH---hhcCCCCCEECCCC
Confidence            3568889999888 99999999999988876   78999999999988

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=2e-11  Score=56.57  Aligned_cols=38  Identities=24%  Similarity=0.285  Sum_probs=26.8

Q ss_pred             hcCCCCceeCCC--CcccccchhHHHHHH-HHhcCcccCCCC
Q psy12011         54 ECGQEPRFQCPQ--CSYRTKRKGNLKSHL-AIRHECYLDDSA   92 (94)
Q Consensus        54 ~~~~~~~~~c~~--c~~~f~~~~~l~~h~-~~~~~~~~~~c~   92 (94)
                      ..+++| |.|..  |+++|...++|.+|+ ++|++++||-|.
T Consensus        22 ~sGEKP-YkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRP-YRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCS-CBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCC-eECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            345566 77754  777777777777776 567777777764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=52.62  Aligned_cols=40  Identities=23%  Similarity=0.369  Sum_probs=36.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~~   46 (46)
T 2em2_A            7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCS-SCSSCC
T ss_pred             CCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            7889999999999999999999999999999888 999764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.17  E-value=2.2e-11  Score=49.78  Aligned_cols=37  Identities=27%  Similarity=0.532  Sum_probs=31.9

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      +|++.|.++++ |.|..|++.|.....|..|+++|+++
T Consensus         1 ~H~~~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKP-FQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSS-BCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCC-ccCCCCCcccCcHHHHHHHHHHhccC
Confidence            36778888887 99999999999999999999988764

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.17  E-value=1.1e-11  Score=58.08  Aligned_cols=53  Identities=21%  Similarity=0.533  Sum_probs=46.8

Q ss_pred             CCCCCceeecCC--CCccccchhccC-----CCCCCcccccc--chhhccChHHHHcchhhh
Q psy12011          2 SSQNLQVHFCGL--FPESFLTWSNLK-----PNLNGMFACDL--CDKEYKYKRNLYSHKKDE   54 (94)
Q Consensus         2 ~~~~~~~~~c~~--c~~~~~~~~~l~-----~~~~k~~~c~~--c~~~~~~~~~l~~h~~~~   54 (94)
                      ...+.++|.|..  |++.|.....|.     |+++++|.|..  |++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            456788999998  999999999887     78999999964  999999999999998764

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=2.1e-11  Score=51.65  Aligned_cols=39  Identities=21%  Similarity=0.362  Sum_probs=35.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   43 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKS-GPSSG   43 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTC-SSSCC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCC-ccCCC
Confidence            7788999999999999999999999999999888 99864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.4e-11  Score=52.11  Aligned_cols=39  Identities=21%  Similarity=0.408  Sum_probs=35.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytp_A            7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCC-CSSCC
T ss_pred             cCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99864

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.15  E-value=4.8e-11  Score=48.10  Aligned_cols=34  Identities=21%  Similarity=0.350  Sum_probs=28.9

Q ss_pred             hcCCCCceeCCCCcccccchhHHHHHHHHhcCccc
Q psy12011         54 ECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYL   88 (94)
Q Consensus        54 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   88 (94)
                      |.++++ |.|..|++.|...++|..|+++|++++|
T Consensus         2 h~~~k~-~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSG-YVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCS-EECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCC-eECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            456666 9999999999999999999999988765

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.3e-11  Score=51.64  Aligned_cols=39  Identities=18%  Similarity=0.393  Sum_probs=36.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq2_A            7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCC-CCCCC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.8e-11  Score=51.86  Aligned_cols=39  Identities=18%  Similarity=0.368  Sum_probs=36.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enf_A            7 GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSC-CCCSC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99874

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.2e-11  Score=51.98  Aligned_cols=40  Identities=23%  Similarity=0.415  Sum_probs=36.2

Q ss_pred             CCCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         25 KPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        25 ~~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      .|+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKS-GPSSG   45 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCC-CCSCC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCC-CCCCC
Confidence            37889999999999999999999999999999888 99864

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.14  E-value=3e-11  Score=50.80  Aligned_cols=38  Identities=21%  Similarity=0.448  Sum_probs=34.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCP   64 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~   64 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2el5_A            5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESG-PSSG   42 (42)
T ss_dssp             SSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCS-CCCC
T ss_pred             CCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCC-CCCC
Confidence            7788999999999999999999999999999887 8874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.5e-11  Score=52.10  Aligned_cols=39  Identities=23%  Similarity=0.453  Sum_probs=36.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em4_A            7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSC-CCCCC
T ss_pred             cCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99874

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.4e-11  Score=50.22  Aligned_cols=37  Identities=24%  Similarity=0.444  Sum_probs=34.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC   63 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c   63 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2ytb_A            6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP-SSG   42 (42)
T ss_dssp             CCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC-CCC
T ss_pred             cCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            7888999999999999999999999999999887 876

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.7e-11  Score=50.69  Aligned_cols=37  Identities=22%  Similarity=0.470  Sum_probs=33.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC   63 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c   63 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP-SSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSC-SCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCC-cCC
Confidence            7788999999999999999999999999999887 876

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.9e-11  Score=51.43  Aligned_cols=39  Identities=23%  Similarity=0.454  Sum_probs=35.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yth_A            7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCC-SSCCC
T ss_pred             CCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            7888999999999999999999999999999888 99864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.14  E-value=2.8e-11  Score=51.91  Aligned_cols=39  Identities=21%  Similarity=0.410  Sum_probs=35.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emj_A            7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCS-SSSCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999887 99874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.8e-11  Score=51.92  Aligned_cols=39  Identities=18%  Similarity=0.435  Sum_probs=35.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|.+|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERP-SGPSS   45 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCS-CTTSC
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCC-CCCCC
Confidence            7889999999999999999999999999999887 99864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.1e-11  Score=51.75  Aligned_cols=39  Identities=18%  Similarity=0.359  Sum_probs=36.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yti_A            7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCC-SSTTC
T ss_pred             CCCCcCeECCCCCcccCChhHHHHHhHhcCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.5e-11  Score=51.59  Aligned_cols=39  Identities=23%  Similarity=0.485  Sum_probs=36.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2em3_A            7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKP-SGPSS   45 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCC-CCSCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.13  E-value=6.4e-11  Score=47.76  Aligned_cols=34  Identities=26%  Similarity=0.527  Sum_probs=28.6

Q ss_pred             hcCCCCceeCCCCcccccchhHHHHHHHHhcCccc
Q psy12011         54 ECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYL   88 (94)
Q Consensus        54 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   88 (94)
                      |.++++ |.|..|++.|...++|.+|+++|++++|
T Consensus         2 H~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRP-FVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSC-EECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcC-eeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            556676 9999999999999999999999888765

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.13  E-value=1.2e-11  Score=60.32  Aligned_cols=55  Identities=18%  Similarity=0.224  Sum_probs=33.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..+.    ....|..|+++|.+
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ-KRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHH-HHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC-cccchhh----hHHHHHhhhccccc
Confidence            5666677777777777777777777777766665 6765543    33333445555544

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.4e-11  Score=51.57  Aligned_cols=39  Identities=18%  Similarity=0.426  Sum_probs=35.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eow_A            7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKP-SGPSS   45 (46)
T ss_dssp             SCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSC-SCTTC
T ss_pred             CCCCCCeeccccCChhcCHHHHHHHHHHcCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99864

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.6e-11  Score=51.59  Aligned_cols=39  Identities=18%  Similarity=0.293  Sum_probs=36.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCC-SSCCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99864

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.3e-11  Score=51.32  Aligned_cols=39  Identities=21%  Similarity=0.464  Sum_probs=35.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC-CCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.8e-11  Score=51.42  Aligned_cols=39  Identities=21%  Similarity=0.414  Sum_probs=35.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p-~~C~~   45 (46)
T 2yts_A            7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCS-SCCCC
T ss_pred             CCCCcCEECCCCChhhCChHHHHHHHHhcCCCCC-cCCCC
Confidence            7888999999999999999999999999999887 99864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.2e-11  Score=51.33  Aligned_cols=39  Identities=28%  Similarity=0.427  Sum_probs=35.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2emg_A            7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERP-SGPSS   45 (46)
T ss_dssp             CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCC-SCSCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7888999999999999999999999999999888 99864

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.9e-11  Score=51.46  Aligned_cols=39  Identities=21%  Similarity=0.439  Sum_probs=36.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCC-CSCCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.8e-11  Score=51.09  Aligned_cols=39  Identities=21%  Similarity=0.362  Sum_probs=35.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ep1_A            7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENP-SGPSS   45 (46)
T ss_dssp             CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCC-CSSSC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.6e-11  Score=51.21  Aligned_cols=39  Identities=23%  Similarity=0.498  Sum_probs=35.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em6_A            7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCC-CCTTC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            7888999999999999999999999999999888 99864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.6e-11  Score=51.18  Aligned_cols=39  Identities=21%  Similarity=0.370  Sum_probs=35.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emi_A            7 GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKP-SGPSS   45 (46)
T ss_dssp             CSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCC-CSCCC
T ss_pred             cCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999887 99864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4e-11  Score=51.42  Aligned_cols=39  Identities=18%  Similarity=0.298  Sum_probs=35.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|+.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eoh_A            7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERS-SGPSS   45 (46)
T ss_dssp             CCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCS-CSTTC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999887 99864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.9e-11  Score=51.40  Aligned_cols=39  Identities=26%  Similarity=0.494  Sum_probs=35.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytf_A            7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSS-SCCCC
T ss_pred             CCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7888999999999999999999999999999887 99864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.8e-11  Score=51.41  Aligned_cols=39  Identities=18%  Similarity=0.380  Sum_probs=36.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~~C~~   45 (46)
T 2eor_A            7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             SSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCC-SSSTT
T ss_pred             cCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99864

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.11  E-value=9.4e-11  Score=46.84  Aligned_cols=31  Identities=26%  Similarity=0.603  Sum_probs=28.0

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcCcccCC
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHECYLDD   90 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   90 (94)
                      ||.|.+|++.|...++|..|+++|+++++|.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            3899999999999999999999999999885

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.1e-11  Score=50.02  Aligned_cols=37  Identities=14%  Similarity=0.270  Sum_probs=33.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC   63 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c   63 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   41 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSG-PSS   41 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSS-CCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCC-CCC
Confidence            7788999999999999999999999999999887 887

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.2e-11  Score=51.40  Aligned_cols=41  Identities=20%  Similarity=0.335  Sum_probs=37.0

Q ss_pred             CCCCCCccccc--cchhhccChHHHHcchhhhcCCCCceeCCCC
Q psy12011         25 KPNLNGMFACD--LCDKEYKYKRNLYSHKKDECGQEPRFQCPQC   66 (94)
Q Consensus        25 ~~~~~k~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c   66 (94)
                      .|+++++|.|.  .|++.|.....|..|++.|.++++ |.|..|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS-CSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            37888999998  899999999999999999999888 999876

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.3e-11  Score=50.99  Aligned_cols=39  Identities=21%  Similarity=0.415  Sum_probs=35.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq1_A            7 GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCC-SSCCC
T ss_pred             cCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7888999999999999999999999999999887 99864

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.10  E-value=5e-11  Score=50.05  Aligned_cols=37  Identities=16%  Similarity=0.351  Sum_probs=33.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC   63 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c   63 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~-~~C   42 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP-SSG   42 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCC-CCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCC-CCC
Confidence            7788999999999999999999999999999887 876

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.4e-11  Score=50.92  Aligned_cols=39  Identities=23%  Similarity=0.418  Sum_probs=35.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yrj_A            7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCS-SCSCC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            7888999999999999999999999999999887 99864

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.9e-11  Score=51.13  Aligned_cols=39  Identities=13%  Similarity=0.266  Sum_probs=35.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETL-SGPSS   45 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCS-SSCCC
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999887 99864

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=5.6e-11  Score=50.45  Aligned_cols=38  Identities=16%  Similarity=0.344  Sum_probs=34.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCP   64 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~   64 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG-PSSG   44 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCS-SCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCC-CCCC
Confidence            7889999999999999999999999999999887 8874

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.8e-11  Score=50.44  Aligned_cols=37  Identities=16%  Similarity=0.310  Sum_probs=33.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC   63 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c   63 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP-SSG   42 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCS-SCC
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCC-CCC
Confidence            7888999999999999999999999999999887 876

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.4e-11  Score=50.27  Aligned_cols=37  Identities=19%  Similarity=0.448  Sum_probs=33.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC   63 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c   63 (94)
                      |+++++|.|.+|++.|.....|..|++.|.++++ |.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP-SSG   42 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS-TTC
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCC-CCC
Confidence            7788999999999999999999999999999877 776

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=5.5e-11  Score=50.96  Aligned_cols=39  Identities=15%  Similarity=0.335  Sum_probs=35.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcC-CCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECG-QEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~-~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|+++|.+ +++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~~C~~   46 (46)
T 2eoy_A            7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKS-GPSSG   46 (46)
T ss_dssp             CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTT-SSSCC
T ss_pred             cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            7888999999999999999999999999998 888 98863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.3e-11  Score=50.49  Aligned_cols=38  Identities=26%  Similarity=0.378  Sum_probs=34.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCP   64 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~   64 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eoj_A            7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG-PSSG   44 (44)
T ss_dssp             SSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCS-CCCC
T ss_pred             cCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            7889999999999999999999999999999887 8874

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=7e-11  Score=50.16  Aligned_cols=38  Identities=16%  Similarity=0.236  Sum_probs=34.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCP   64 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~   64 (94)
                      |+++++|.|.+|++.|.....|..|+++|.++++ |.|.
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESG-PSSG   44 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC-CCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCC-CCCC
Confidence            7888999999999999999999999999999888 8884

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.5e-11  Score=50.18  Aligned_cols=38  Identities=21%  Similarity=0.431  Sum_probs=34.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCP   64 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~   64 (94)
                      |+++++|.|..|++.|.....|..|+++|.++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eof_A            7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG-PSSG   44 (44)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSC-SCCC
T ss_pred             CCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCC-CCCC
Confidence            7889999999999999999999999999999887 8874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.3e-11  Score=50.07  Aligned_cols=37  Identities=16%  Similarity=0.249  Sum_probs=34.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC   63 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c   63 (94)
                      |+++++|.|.+|++.|.....|..|++.|.++++ |.|
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG-PSS   43 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCC-CSC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhCCCCC-CCC
Confidence            7889999999999999999999999999999887 887

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6e-11  Score=50.27  Aligned_cols=38  Identities=18%  Similarity=0.345  Sum_probs=34.8

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCP   64 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~   64 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2en7_A            7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG-PSSG   44 (44)
T ss_dssp             SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS-SCCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCC-CCCC
Confidence            7888999999999999999999999999999887 8874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=6.5e-11  Score=50.23  Aligned_cols=38  Identities=13%  Similarity=0.403  Sum_probs=34.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCP   64 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~   64 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2emb_A            7 GHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSG-PSSG   44 (44)
T ss_dssp             CCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCC-TTCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCCC
Confidence            7888999999999999999999999999999887 8874

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.5e-11  Score=50.48  Aligned_cols=39  Identities=18%  Similarity=0.418  Sum_probs=35.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq3_A            7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKP-SGPSS   45 (46)
T ss_dssp             SCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCC-CCSCC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999887 99864

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=1.8e-10  Score=47.27  Aligned_cols=36  Identities=19%  Similarity=0.326  Sum_probs=30.3

Q ss_pred             hcCCCCceeCC--CCcccccchhHHHHHHHHhcCcccCC
Q psy12011         54 ECGQEPRFQCP--QCSYRTKRKGNLKSHLAIRHECYLDD   90 (94)
Q Consensus        54 ~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~   90 (94)
                      |.++++ |.|.  .|++.|...++|.+|+++|+++++|.
T Consensus         1 H~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKP-FLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCC-EECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcc-eECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            346666 9999  59999999999999999999998873

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.4e-11  Score=50.98  Aligned_cols=39  Identities=18%  Similarity=0.317  Sum_probs=35.4

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yto_A            7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH-SGPSS   45 (46)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCB-TTTBC
T ss_pred             cCCCCCEECcccCCccCCHhHHHHHHHHcCCCCC-CCCCC
Confidence            7888999999999999999999999999999887 88863

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.06  E-value=7.7e-11  Score=52.26  Aligned_cols=46  Identities=15%  Similarity=0.121  Sum_probs=39.3

Q ss_pred             CccccchhccC-----CCCCCccccccchhhccChHHHHcchhhhcCCCCce
Q psy12011         15 PESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRF   61 (94)
Q Consensus        15 ~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~   61 (94)
                      ++.|.....|.     |+++++|.|..|++.|...+.|..|+++|.++++ |
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP-G   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC-C
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC-C
Confidence            34566666665     6899999999999999999999999999999877 5

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.8e-11  Score=50.66  Aligned_cols=39  Identities=15%  Similarity=0.267  Sum_probs=36.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQ   65 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~   65 (94)
                      |.++++|.|.+|++.|.....|..|++.|.++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emz_A            7 GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKS-SGPSS   45 (46)
T ss_dssp             SSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTC-CCSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            7889999999999999999999999999999888 99863

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.7e-11  Score=50.65  Aligned_cols=38  Identities=16%  Similarity=0.384  Sum_probs=35.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCP   64 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~   64 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.|+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2en3_A            7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP-SGPS   44 (46)
T ss_dssp             SCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCC-SSCS
T ss_pred             cCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            7889999999999999999999999999999888 9886

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=3.5e-10  Score=46.76  Aligned_cols=32  Identities=28%  Similarity=0.580  Sum_probs=26.3

Q ss_pred             hcCCCCceeCCC--CcccccchhHHHHHHHHhcCc
Q psy12011         54 ECGQEPRFQCPQ--CSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        54 ~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      +.+++| |.|..  |++.|...++|.+|+++|+++
T Consensus         4 ~~gekp-~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGIL-LKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCC-EECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCC-CCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            456666 99976  999999999999999988875

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2.7e-10  Score=46.44  Aligned_cols=34  Identities=15%  Similarity=0.452  Sum_probs=28.8

Q ss_pred             hhcCCCCceeCCCCcccccch-hHHHHHHHHhcCcc
Q psy12011         53 DECGQEPRFQCPQCSYRTKRK-GNLKSHLAIRHECY   87 (94)
Q Consensus        53 ~~~~~~~~~~c~~c~~~f~~~-~~l~~h~~~~~~~~   87 (94)
                      +|.++++ |.|..|++.|... +.|..|+++|++++
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRA-MKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCC-EECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCC-eECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            4667677 9999999999998 99999999988764

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.9e-10  Score=48.78  Aligned_cols=37  Identities=19%  Similarity=0.393  Sum_probs=33.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC   63 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c   63 (94)
                      |+++++|.|.+|++.|.....|..|++.|.++++ |.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~~   43 (44)
T 2epv_A            7 GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG-PSS   43 (44)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC-CCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC-CCC
Confidence            7889999999999999999999999999999887 765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=4.5e-10  Score=45.41  Aligned_cols=34  Identities=35%  Similarity=0.677  Sum_probs=28.0

Q ss_pred             hhcCCCCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         53 DECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        53 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      .|.++++ |.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKP-YKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCS-EECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCC-CCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4566666 999999999999999999999888764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=3.5e-10  Score=45.80  Aligned_cols=34  Identities=32%  Similarity=0.664  Sum_probs=28.0

Q ss_pred             hhcCCCCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         53 DECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        53 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      .|.++++ |.|..|++.|...++|..|+++|++++
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKP-FKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCS-EECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCC-ccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4566676 999999999999999999998888764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=9.1e-12  Score=60.77  Aligned_cols=44  Identities=20%  Similarity=0.421  Sum_probs=38.6

Q ss_pred             chhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         50 HKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        50 h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      +..+|.++++ |.|.+|++.|....+|..|+++|+++++|+|..|
T Consensus        16 ~~~~H~~~kp-y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~   59 (88)
T 1x6f_A           16 GNGPRLQNST-YQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ   59 (88)
T ss_dssp             CCCSCCCCSC-EECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             cccccCCCCC-CcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh
Confidence            4456788787 9999999999999999999999999999999764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=3.3e-10  Score=45.92  Aligned_cols=34  Identities=12%  Similarity=0.330  Sum_probs=27.4

Q ss_pred             hhcCCCCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         53 DECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        53 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      .|.++++ |.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLL-YDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCC-EECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCC-eECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            3556666 899999999999999999988887764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.98  E-value=2e-10  Score=47.45  Aligned_cols=37  Identities=14%  Similarity=0.284  Sum_probs=31.7

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQC   63 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c   63 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++ |.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRA-RLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCT-TTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcc-cee
Confidence            4678899999999999999999999999999877 654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=6.2e-10  Score=44.99  Aligned_cols=34  Identities=26%  Similarity=0.395  Sum_probs=27.3

Q ss_pred             hhcCCCCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         53 DECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        53 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      .|.++++ |.|..|++.|....+|..|+++|++++
T Consensus         3 ~h~~~~~-~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKT-HLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSS-CBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCC-eecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            3556666 889999999988888889988888764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.4e-10  Score=46.26  Aligned_cols=34  Identities=24%  Similarity=0.481  Sum_probs=27.5

Q ss_pred             hhhcCCCCceeCCCCcccccchhHHHHH-HHHhcCc
Q psy12011         52 KDECGQEPRFQCPQCSYRTKRKGNLKSH-LAIRHEC   86 (94)
Q Consensus        52 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~~~   86 (94)
                      +.|.++++ |.|..|++.|...++|..| +++|+++
T Consensus         2 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHL-YYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCE-EECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcC-eECCCCCcccCCHHHHHHHHHHHccCc
Confidence            35677676 9999999999998899999 8888764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.6e-10  Score=54.73  Aligned_cols=60  Identities=23%  Similarity=0.349  Sum_probs=51.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLD   89 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~   89 (94)
                      +.+++++.|..|++.|. ...|..|+ .+.++++ +.|..|++.|. ...|..|++++.+++.-
T Consensus        12 ~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~-~~C~~C~~~~~-~~~l~~H~~~c~~~~~~   71 (75)
T 2d9k_A           12 ECPLRLAVCQHCDLELS-ILKLKEHE-DYCGART-ELCGNCGRNVL-VKDLKTHPEVCGREGSG   71 (75)
T ss_dssp             CCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCE-EECSSSCCEEE-TTGGGTHHHHBTTBSSS
T ss_pred             cCCCcccCCcccChHhh-HHHHHHHH-hHcCCCc-eEcccCCCcCc-HHHHHHHHHHccCCcCC
Confidence            67789999999999995 88899998 7888788 99999999877 58899999999887653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.1e-09  Score=44.30  Aligned_cols=33  Identities=27%  Similarity=0.390  Sum_probs=27.4

Q ss_pred             hcCCCCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         54 ECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        54 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      +.++++ |.|..|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKI-FTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCC-EECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCC-EECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            456666 999999999999999999999988764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.94  E-value=1.9e-10  Score=49.57  Aligned_cols=39  Identities=26%  Similarity=0.422  Sum_probs=32.7

Q ss_pred             HcchhhhcCCCCceeCC--CCcccccchhHHHHHHHHhcCcc
Q psy12011         48 YSHKKDECGQEPRFQCP--QCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        48 ~~h~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      ..+...|.++++ |.|.  .|++.|...++|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~-~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKT-FECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTE-EECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCC-eECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            345566888787 9995  79999999999999999998874

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=6.6e-10  Score=51.52  Aligned_cols=40  Identities=15%  Similarity=0.189  Sum_probs=35.5

Q ss_pred             CCCCCcccccc--chhhccChHHHHcch-hhhcCCCCceeCCCC
Q psy12011         26 PNLNGMFACDL--CDKEYKYKRNLYSHK-KDECGQEPRFQCPQC   66 (94)
Q Consensus        26 ~~~~k~~~c~~--c~~~~~~~~~l~~h~-~~~~~~~~~~~c~~c   66 (94)
                      .+++|||.|..  |++.|...+.|..|+ ++|++++| +.|.+-
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP-~~~~~~   64 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP-AFSAEV   64 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC-CCCCSC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC-cccccc
Confidence            78999999964  999999999999997 68999898 888653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.92  E-value=5.9e-10  Score=45.50  Aligned_cols=31  Identities=16%  Similarity=0.283  Sum_probs=23.5

Q ss_pred             cCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCC
Q psy12011         55 CGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSAN   93 (94)
Q Consensus        55 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~   93 (94)
                      .+++| |.|.+|+++|...++|.+|+       ||.|..
T Consensus         4 ~gekp-~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            4 LKPAR-FMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSCCC-CEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCccC-eECCCCCCccCCHhHccCcC-------CeECcC
Confidence            45666 88888888888888888887       666653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.91  E-value=8.7e-10  Score=44.22  Aligned_cols=34  Identities=24%  Similarity=0.425  Sum_probs=29.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5678899999999999999999999999988653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.90  E-value=1.1e-09  Score=43.98  Aligned_cols=34  Identities=21%  Similarity=0.301  Sum_probs=29.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      |+++++|.|..|++.|.....|..|++.|.++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5678899999999999999999999999987653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.89  E-value=1.2e-09  Score=47.27  Aligned_cols=33  Identities=27%  Similarity=0.428  Sum_probs=19.4

Q ss_pred             hcCCCCceeCCCCcccccchhHHHHHHH-HhcCcc
Q psy12011         54 ECGQEPRFQCPQCSYRTKRKGNLKSHLA-IRHECY   87 (94)
Q Consensus        54 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~   87 (94)
                      |.++++ |.|.+|++.|....+|..|++ +|+++.
T Consensus         2 Ht~~kp-~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKP-YACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSC-EECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcC-EECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            445555 666666666666666666666 665543

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1e-09  Score=44.63  Aligned_cols=34  Identities=21%  Similarity=0.437  Sum_probs=30.2

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      |+++++|.|..|++.|.....|..|++.|.+++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            6788999999999999999999999999988654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.86  E-value=8.8e-11  Score=46.58  Aligned_cols=29  Identities=28%  Similarity=0.501  Sum_probs=21.0

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcccC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECYLD   89 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~   89 (94)
                      |.|..|++.|...++|..|+++|++++++
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            67777777777777777777777777665

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.86  E-value=2.7e-09  Score=43.44  Aligned_cols=33  Identities=15%  Similarity=0.260  Sum_probs=26.7

Q ss_pred             hcCCCCceeCC--CCcccccchhHHHHHHHHhcCcc
Q psy12011         54 ECGQEPRFQCP--QCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        54 ~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      +.++++ |.|.  .|++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQ-HICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCC-EECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCC-CCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            456666 8998  49999999999999999888764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.83  E-value=3.9e-09  Score=40.58  Aligned_cols=29  Identities=21%  Similarity=0.388  Sum_probs=23.9

Q ss_pred             CCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         58 EPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      ++ |.|..|++.|.....|..|+++|++++
T Consensus         2 k~-~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KP-YQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CC-EECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cC-ccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            44 888889988888888888888888764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.82  E-value=4.3e-09  Score=40.25  Aligned_cols=27  Identities=30%  Similarity=0.667  Sum_probs=23.2

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      |.|..|++.|...+.|..|+++|++++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            889999999998889999988888764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.80  E-value=5.2e-09  Score=39.97  Aligned_cols=27  Identities=26%  Similarity=0.449  Sum_probs=23.3

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      |.|..|++.|...+.|..|+++|++++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            889999999999999999998888764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3.1e-09  Score=43.83  Aligned_cols=32  Identities=22%  Similarity=0.258  Sum_probs=28.3

Q ss_pred             CCCCCcccccc--chhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDL--CDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~--c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      +++++||.|..  |++.|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            57789999986  999999999999999999874

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.80  E-value=2.7e-09  Score=42.43  Aligned_cols=32  Identities=22%  Similarity=0.202  Sum_probs=28.7

Q ss_pred             CccccccchhhccChHHHHcchhhhcCCCCcee
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQ   62 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~   62 (94)
                      +||.|.+|++.|.....|..|+++|.++++ |.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE-ER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC-CC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC-CC
Confidence            578999999999999999999999999877 64

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.79  E-value=5.4e-09  Score=39.87  Aligned_cols=28  Identities=32%  Similarity=0.587  Sum_probs=24.1

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      ||.|..|++.|....+|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            3889999999999999999999888764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.79  E-value=5.7e-09  Score=40.09  Aligned_cols=28  Identities=32%  Similarity=0.736  Sum_probs=24.1

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCccc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECYL   88 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~   88 (94)
                      |.|..|++.|...+.|..|+++|+++++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            8899999999998999999998887753

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=4.7e-09  Score=42.27  Aligned_cols=32  Identities=22%  Similarity=0.399  Sum_probs=28.6

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      |.++++|.|..|++.|.....|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            67888999999999999999999999998875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.76  E-value=5.1e-09  Score=39.38  Aligned_cols=27  Identities=19%  Similarity=0.455  Sum_probs=21.5

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      ||.|..|++.|...+.|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            478888888888888888888888763

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.76  E-value=3.3e-09  Score=43.33  Aligned_cols=34  Identities=18%  Similarity=0.267  Sum_probs=30.0

Q ss_pred             CCCCCccccc--cchhhccChHHHHcchhhhcCCCC
Q psy12011         26 PNLNGMFACD--LCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus        26 ~~~~k~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      |+++++|.|.  .|++.|...+.|..|++.|.++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            4678899999  599999999999999999998776

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.76  E-value=9e-09  Score=40.32  Aligned_cols=27  Identities=22%  Similarity=0.379  Sum_probs=22.3

Q ss_pred             eeCC--CCcccccchhHHHHHHHHhcCcc
Q psy12011         61 FQCP--QCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        61 ~~c~--~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      |.|.  .|++.|...+.|..|+++|++++
T Consensus         4 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            4 YSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             BCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            8888  78888888888888888887764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.9e-09  Score=42.28  Aligned_cols=32  Identities=13%  Similarity=0.377  Sum_probs=28.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      |+++++|.|..|++.|.....|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            56788999999999999999999999988764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.75  E-value=7.6e-09  Score=39.40  Aligned_cols=27  Identities=37%  Similarity=0.694  Sum_probs=23.3

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      |.|..|++.|...+.|..|+++|++++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            3 HKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            888999999998889999998888764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.4e-09  Score=51.45  Aligned_cols=46  Identities=22%  Similarity=0.322  Sum_probs=41.3

Q ss_pred             HHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         46 NLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        46 ~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      .|..|++.+.+.++ +.|..|++.|. ...|..|+ .+.+++++.|..|
T Consensus         4 ~L~~H~~~~c~~r~-~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C   49 (75)
T 2d9k_A            4 GSSGHEETECPLRL-AVCQHCDLELS-ILKLKEHE-DYCGARTELCGNC   49 (75)
T ss_dssp             CCSCCCCCCCCCCC-EECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSS
T ss_pred             HHHhhCcccCCCcc-cCCcccChHhh-HHHHHHHH-hHcCCCceEcccC
Confidence            46788888889888 99999999995 88999999 8999999999987

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=1.1e-08  Score=47.25  Aligned_cols=32  Identities=22%  Similarity=0.445  Sum_probs=22.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      +++++||.|..|++.|.....|..|+++|+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            45566777777777777777777777777664

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=5.7e-09  Score=42.08  Aligned_cols=32  Identities=25%  Similarity=0.456  Sum_probs=28.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      |.++++|.|.+|++.|.....|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            67788999999999999999999999988764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=6.6e-09  Score=41.80  Aligned_cols=32  Identities=31%  Similarity=0.493  Sum_probs=28.6

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      |.++++|.|.+|++.|.....|..|++.|.++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            67788999999999999999999999998875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.74  E-value=7.1e-09  Score=40.38  Aligned_cols=27  Identities=26%  Similarity=0.452  Sum_probs=22.7

Q ss_pred             eeCC--CCcccccchhHHHHHHHHhcCcc
Q psy12011         61 FQCP--QCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        61 ~~c~--~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      |.|.  .|++.|...+.|..|+++|++++
T Consensus         3 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            8887  88888888888888888888764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.73  E-value=7.5e-09  Score=41.92  Aligned_cols=31  Identities=23%  Similarity=0.364  Sum_probs=28.4

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      |+++++|.|..|++.|.....|..|++.|.+
T Consensus         6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            6 STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            7888999999999999999999999998876

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=7.1e-09  Score=42.04  Aligned_cols=32  Identities=19%  Similarity=0.285  Sum_probs=28.1

Q ss_pred             CCCCCccccccchhhccCh-HHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDLCDKEYKYK-RNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~-~~l~~h~~~~~~~   57 (94)
                      |+++++|.|..|++.|... ..|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            6778899999999999998 9999999998774

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=9.4e-09  Score=41.40  Aligned_cols=32  Identities=25%  Similarity=0.647  Sum_probs=28.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      +.++++|.|..|++.|.....|..|++.|.++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            56788999999999999999999999998875

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.70  E-value=1.7e-08  Score=37.98  Aligned_cols=26  Identities=27%  Similarity=0.678  Sum_probs=21.3

Q ss_pred             CCceeCCCCcccccchhHHHHHHHHhc
Q psy12011         58 EPRFQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      ++ |.|..|++.|...+.|..|+++|+
T Consensus         2 k~-~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KP-FSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CC-EECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cC-ccCCCcChhhCCHHHHHHHHHHcc
Confidence            44 888888888888888888888764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.70  E-value=1.3e-08  Score=38.59  Aligned_cols=25  Identities=20%  Similarity=0.559  Sum_probs=20.7

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |.|..|++.|...+.|..|+++|++
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            4 YSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             EECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             ccCCCCCcccCCHHHHHHHHHhcCC
Confidence            8888888888888888888887753

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.69  E-value=1.7e-09  Score=42.70  Aligned_cols=30  Identities=27%  Similarity=0.346  Sum_probs=26.3

Q ss_pred             CccccccchhhccChHHHHcchhhhcCCCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQEP   59 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~   59 (94)
                      +||.|..|++.|...+.|..|+++|.++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            578899999999999999999999988776

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=1.9e-09  Score=41.34  Aligned_cols=27  Identities=19%  Similarity=0.283  Sum_probs=21.2

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      |.|..|++.|...++|..|+++|++++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            788888888888888888888777653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.68  E-value=6.9e-09  Score=44.77  Aligned_cols=34  Identities=29%  Similarity=0.590  Sum_probs=28.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchh-hhcCCCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKK-DECGQEP   59 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~   59 (94)
                      |+++++|.|..|++.|.....|..|++ .|.++..
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            577889999999999999999999999 8888655

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.67  E-value=4e-09  Score=42.98  Aligned_cols=25  Identities=20%  Similarity=0.357  Sum_probs=18.6

Q ss_pred             CCCCccccccchhhccChHHHHcch
Q psy12011         27 NLNGMFACDLCDKEYKYKRNLYSHK   51 (94)
Q Consensus        27 ~~~k~~~c~~c~~~~~~~~~l~~h~   51 (94)
                      .+++||.|.+|++.|...+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4667777777777777777777776

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.67  E-value=1.2e-08  Score=38.47  Aligned_cols=26  Identities=19%  Similarity=0.607  Sum_probs=20.6

Q ss_pred             CCceeCCCCcccccchhHHHHHHHHhc
Q psy12011         58 EPRFQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      ++ |.|..|++.|...++|..|+++|+
T Consensus         2 k~-~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 AP-YRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CT-EEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cC-cCCCCCCcccCCHHHHHHHHHhcC
Confidence            44 888888888888888888887763

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=9.5e-09  Score=41.76  Aligned_cols=31  Identities=16%  Similarity=0.288  Sum_probs=26.9

Q ss_pred             CCCCCccccccchhhccChHHHHcc-hhhhcC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSH-KKDECG   56 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h-~~~~~~   56 (94)
                      |++++||.|+.|++.|.....|..| ++.|.+
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            6778899999999999999999999 888866

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=2.8e-09  Score=41.09  Aligned_cols=27  Identities=22%  Similarity=0.480  Sum_probs=20.7

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      |.|..|++.|...++|..|+++|++++
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            4 YVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            778888888888888888887777653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.64  E-value=1.6e-08  Score=41.05  Aligned_cols=32  Identities=25%  Similarity=0.446  Sum_probs=26.7

Q ss_pred             CCCCCccccc--cchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACD--LCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~--~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      ++++++|.|.  .|++.|...+.|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            6677888887  4888898889999999988875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.62  E-value=1.7e-08  Score=38.75  Aligned_cols=27  Identities=22%  Similarity=0.410  Sum_probs=21.3

Q ss_pred             eeCCCCcccccchhHHHHH-HHHhcCcc
Q psy12011         61 FQCPQCSYRTKRKGNLKSH-LAIRHECY   87 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h-~~~~~~~~   87 (94)
                      |.|..|++.|...+.|..| +++|++++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             cCCcccCcccCChHHHHHHHHHHccCCC
Confidence            7888888888888888888 67777653

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.58  E-value=2.7e-08  Score=38.07  Aligned_cols=29  Identities=14%  Similarity=0.369  Sum_probs=25.6

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCC
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      +++|.|..|++.|.....|..|++.|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46899999999999999999999988774

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=3.5e-08  Score=45.48  Aligned_cols=34  Identities=18%  Similarity=0.158  Sum_probs=29.6

Q ss_pred             hcCCCCceeCCCCcccccchhHHHHHHHHhcCccc
Q psy12011         54 ECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYL   88 (94)
Q Consensus        54 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   88 (94)
                      +.++++ |.|.+|++.|....+|.+|+++|+++..
T Consensus         8 ~~~ekp-y~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LREAGI-LPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCC-CCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCccC-cCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            456676 9999999999999999999999998754

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.56  E-value=3.3e-08  Score=37.62  Aligned_cols=28  Identities=25%  Similarity=0.316  Sum_probs=25.0

Q ss_pred             CccccccchhhccChHHHHcchhhhcCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5789999999999999999999998875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.52  E-value=5.2e-08  Score=37.21  Aligned_cols=29  Identities=24%  Similarity=0.477  Sum_probs=25.8

Q ss_pred             CccccccchhhccChHHHHcchhhhcCCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQE   58 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~~   58 (94)
                      ++|.|..|++.|.....|..|++.|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            47899999999999999999999998765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.51  E-value=7.6e-08  Score=37.52  Aligned_cols=29  Identities=31%  Similarity=0.645  Sum_probs=25.9

Q ss_pred             CCccccc--cchhhccChHHHHcchhhhcCC
Q psy12011         29 NGMFACD--LCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        29 ~k~~~c~--~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      +++|.|.  .|++.|.....|..|+++|.++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4689998  8999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.51  E-value=5.8e-08  Score=36.85  Aligned_cols=28  Identities=18%  Similarity=0.616  Sum_probs=25.0

Q ss_pred             CccccccchhhccChHHHHcchhhhcCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4789999999999999999999998774

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.49  E-value=5.1e-08  Score=36.99  Aligned_cols=28  Identities=29%  Similarity=0.598  Sum_probs=25.0

Q ss_pred             CccccccchhhccChHHHHcchhhhcCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4789999999999999999999998875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.48  E-value=5.1e-08  Score=36.82  Aligned_cols=28  Identities=21%  Similarity=0.609  Sum_probs=23.6

Q ss_pred             CCccccccchhhccChHHHHcchhhhcC
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      +++|.|..|++.|.....|..|++.|.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4688999999999999999999887753

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.47  E-value=5.5e-08  Score=36.84  Aligned_cols=28  Identities=29%  Similarity=0.456  Sum_probs=25.0

Q ss_pred             CccccccchhhccChHHHHcchhhhcCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5789999999999999999999998875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.45  E-value=9.5e-08  Score=36.98  Aligned_cols=28  Identities=29%  Similarity=0.666  Sum_probs=24.8

Q ss_pred             Cccccc--cchhhccChHHHHcchhhhcCC
Q psy12011         30 GMFACD--LCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        30 k~~~c~--~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      +||.|.  .|++.|...+.|..|+++|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            478897  8999999999999999999875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.84  E-value=2.1e-08  Score=37.34  Aligned_cols=23  Identities=22%  Similarity=0.587  Sum_probs=17.4

Q ss_pred             eeCCCCcccccchhHHHHHHHHh
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIR   83 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~   83 (94)
                      |.|..|++.|...+.|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            77777777777777777777765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.45  E-value=6.8e-08  Score=36.21  Aligned_cols=27  Identities=19%  Similarity=0.426  Sum_probs=22.6

Q ss_pred             CCccccccchhhccChHHHHcchhhhc
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~   55 (94)
                      +++|.|..|++.|.....|..|++.|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468889999999999999999888763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.83  E-value=2.2e-08  Score=38.21  Aligned_cols=28  Identities=21%  Similarity=0.548  Sum_probs=23.8

Q ss_pred             CccccccchhhccChHHHHcchhhhcCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4788999999999999999999888764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.45  E-value=1.7e-07  Score=35.44  Aligned_cols=25  Identities=20%  Similarity=0.494  Sum_probs=21.0

Q ss_pred             eeCC--CCcccccchhHHHHHHHHhcC
Q psy12011         61 FQCP--QCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        61 ~~c~--~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |.|.  .|++.|...+.|..|+++|++
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            8888  888888888888888888764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.44  E-value=5.8e-08  Score=36.50  Aligned_cols=26  Identities=15%  Similarity=0.415  Sum_probs=22.2

Q ss_pred             CCccccccchhhccChHHHHcchhhh
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDE   54 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~   54 (94)
                      ++||.|..|++.|...+.|..|++.|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            46889999999999999999888776

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=2.4e-08  Score=38.29  Aligned_cols=29  Identities=17%  Similarity=0.410  Sum_probs=24.2

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCC
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      +++|.|..|++.|.....|..|++.|.++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            36788999999999988899998888764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.38  E-value=1.5e-07  Score=35.07  Aligned_cols=26  Identities=23%  Similarity=0.586  Sum_probs=22.6

Q ss_pred             ccccccchhhccChHHHHcchhhhcC
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      +|.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            57899999999999999999998876

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.38  E-value=1.6e-07  Score=35.87  Aligned_cols=28  Identities=29%  Similarity=0.694  Sum_probs=24.1

Q ss_pred             CccccccchhhccChHHHHcc-hhhhcCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSH-KKDECGQ   57 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h-~~~~~~~   57 (94)
                      ++|.|..|++.|.....|..| ++.|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            478999999999999999999 6788764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.37  E-value=6.7e-08  Score=41.32  Aligned_cols=32  Identities=25%  Similarity=0.407  Sum_probs=29.1

Q ss_pred             CCCCCccccc--cchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACD--LCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~--~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      |+++++|.|.  .|++.|...+.|..|++.|.++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            7889999995  7999999999999999999875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.63  E-value=8.5e-08  Score=35.58  Aligned_cols=25  Identities=20%  Similarity=0.551  Sum_probs=20.0

Q ss_pred             CccccccchhhccChHHHHcchhhh
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDE   54 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~   54 (94)
                      +||.|.+|++.|.....|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4678888888888888888887765

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.18  E-value=7e-07  Score=33.65  Aligned_cols=27  Identities=30%  Similarity=0.685  Sum_probs=23.2

Q ss_pred             Cccccc--cchhhccChHHHHcchhhhcC
Q psy12011         30 GMFACD--LCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        30 k~~~c~--~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      ++|.|.  .|++.|...+.|..|+++|.+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468898  999999999999999988764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.09  E-value=8.6e-06  Score=37.15  Aligned_cols=52  Identities=19%  Similarity=0.425  Sum_probs=42.4

Q ss_pred             ccccchhhccChHHHHcch-hhhcCCC-----CceeCC--CCcccccchhHHHHHHHHhc
Q psy12011         33 ACDLCDKEYKYKRNLYSHK-KDECGQE-----PRFQCP--QCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        33 ~c~~c~~~~~~~~~l~~h~-~~~~~~~-----~~~~c~--~c~~~f~~~~~l~~h~~~~~   84 (94)
                      ++..|++.|.....|..|+ ..|.+.+     .+|.|.  .|++.+.....|..|+++.|
T Consensus         5 ~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            5 KWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             eeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            3467999999999999998 4677655     139996  89999888899999998764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.27  E-value=6.3e-05  Score=38.60  Aligned_cols=29  Identities=28%  Similarity=0.383  Sum_probs=18.6

Q ss_pred             hhcCCCCceeCCCCcccccchhHHHHHHHH
Q psy12011         53 DECGQEPRFQCPQCSYRTKRKGNLKSHLAI   82 (94)
Q Consensus        53 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~   82 (94)
                      .+.|+.+ |.|..|++.|...+.|..|+++
T Consensus        44 d~tGekp-fyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGL-HRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGC-SEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcc-eEcccCcchhCCHHHHHHHHhh
Confidence            3445555 7777777777777777666654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.11  E-value=8.7e-05  Score=38.10  Aligned_cols=29  Identities=21%  Similarity=0.385  Sum_probs=26.0

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhh
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDE   54 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~   54 (94)
                      ++++++|.|..|++.|.....|..|++..
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            78899999999999999999999998743

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.06  E-value=0.0045  Score=27.94  Aligned_cols=46  Identities=22%  Similarity=0.280  Sum_probs=34.8

Q ss_pred             eecCC--CCccccchhccC------CCCCC------ccccc--cchhhccChHHHHcchhhh
Q psy12011          9 HFCGL--FPESFLTWSNLK------PNLNG------MFACD--LCDKEYKYKRNLYSHKKDE   54 (94)
Q Consensus         9 ~~c~~--c~~~~~~~~~l~------~~~~k------~~~c~--~c~~~~~~~~~l~~h~~~~   54 (94)
                      +.|..  |++.|.+...|.      |.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            35654  899999988876      44433      78885  8999888888899998764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.80  E-value=0.013  Score=24.77  Aligned_cols=21  Identities=24%  Similarity=0.651  Sum_probs=12.6

Q ss_pred             eeCCCCcccccchhHHHHHHH
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLA   81 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~   81 (94)
                      +.|+.|+..|.....|+.|++
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            556666666666666666655

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.62  E-value=0.011  Score=30.37  Aligned_cols=21  Identities=24%  Similarity=0.365  Sum_probs=19.1

Q ss_pred             eeCCCCcccccchhHHHHHHH
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLA   81 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~   81 (94)
                      |-|..|+..|.+...+..|..
T Consensus        94 ~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           94 KCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TEETTTTEECSSHHHHHHHHT
T ss_pred             eEcCCCCCEeCCHHHHHHHHC
Confidence            889999999999999988875

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=95.09  E-value=0.011  Score=28.37  Aligned_cols=26  Identities=31%  Similarity=0.517  Sum_probs=20.3

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcccC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECYLD   89 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~   89 (94)
                      +.|.+||+.|..   |.+|+.++++..|.
T Consensus        22 iiClecGK~fK~---LkRHL~~~hgltpe   47 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSMTPE   47 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCSCHH
T ss_pred             eEecccchhhHH---HHHHHHHccCCCHH
Confidence            788999988874   67899888776653

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.84  E-value=0.02  Score=24.26  Aligned_cols=29  Identities=21%  Similarity=0.455  Sum_probs=24.0

Q ss_pred             CccccccchhhccChHHHHcchhhhcCCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQE   58 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~~   58 (94)
                      ..+.|+.|+..|.....|..||..--++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcch
Confidence            46789999999999999999998655543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.39  E-value=0.029  Score=30.04  Aligned_cols=55  Identities=15%  Similarity=0.325  Sum_probs=29.2

Q ss_pred             cccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCcccC
Q psy12011         32 FACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECYLD   89 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~   89 (94)
                      ..|..|+..+ ....+..|....-..+. ..|..|+..+.. ..+..|..++.|+.++
T Consensus       111 v~C~~C~~~~-~r~~l~~H~~~~C~~r~-~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          111 MDCPQCQRPF-QKFHINIHILKDCPRRQ-VSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             EECTTTCCEE-EGGGHHHHHHHTCTTCE-EECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             eECCCCChHH-HHHHHHHHhhhhCCCCC-eECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            3566666555 34445566654444444 677777665543 3556777766666543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.84  E-value=0.11  Score=20.43  Aligned_cols=25  Identities=32%  Similarity=0.606  Sum_probs=20.6

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |.|+.|-+.|.+...|..|-...|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            8899999999999888888776553

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=91.83  E-value=0.12  Score=25.67  Aligned_cols=12  Identities=17%  Similarity=0.406  Sum_probs=7.6

Q ss_pred             Cccccccchhhc
Q psy12011         30 GMFACDLCDKEY   41 (94)
Q Consensus        30 k~~~c~~c~~~~   41 (94)
                      .+++|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            456666676665

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.39  E-value=0.097  Score=24.52  Aligned_cols=26  Identities=23%  Similarity=0.337  Sum_probs=20.8

Q ss_pred             eeCCCCccccc-------chhHHHHHHHHhcCc
Q psy12011         61 FQCPQCSYRTK-------RKGNLKSHLAIRHEC   86 (94)
Q Consensus        61 ~~c~~c~~~f~-------~~~~l~~h~~~~~~~   86 (94)
                      -.|..|++.+.       ..++|.+|++..|.+
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            68999998876       468999999877643

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.21  E-value=0.21  Score=26.69  Aligned_cols=33  Identities=24%  Similarity=0.446  Sum_probs=24.5

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcccCCCCCC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECYLDDSANC   94 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~C   94 (94)
                      ..|+.|+..+ ....|..|....-+.+...|..|
T Consensus       111 v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C  143 (170)
T 3hcs_A          111 MDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNC  143 (170)
T ss_dssp             EECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTT
T ss_pred             eECCCCChHH-HHHHHHHHhhhhCCCCCeECCCC
Confidence            7888888776 55567888877777777777665

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=90.82  E-value=0.062  Score=25.30  Aligned_cols=12  Identities=25%  Similarity=0.695  Sum_probs=5.8

Q ss_pred             ccccccchhhcc
Q psy12011         31 MFACDLCDKEYK   42 (94)
Q Consensus        31 ~~~c~~c~~~~~   42 (94)
                      .+.|..|++.|.
T Consensus        37 ~~SCIDC~~~F~   48 (79)
T 1wjv_A           37 CLSCIDCGKDFW   48 (79)
T ss_dssp             EEEETTTTEEEE
T ss_pred             cEEecccCCeeC
Confidence            344555555554

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=90.05  E-value=0.25  Score=27.57  Aligned_cols=26  Identities=31%  Similarity=0.447  Sum_probs=22.5

Q ss_pred             CCceeCCCCcccccc-hhHHHHHHHHhc
Q psy12011         58 EPRFQCPQCSYRTKR-KGNLKSHLAIRH   84 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~-~~~l~~h~~~~~   84 (94)
                      .+ ..|..|+..|.+ ...|+.|+..+-
T Consensus       168 ~~-L~C~~C~~~f~n~~~~LK~HL~~e~  194 (204)
T 3sp4_A          168 ED-LKCWRCGETFGRHFTKLKAHLQEEY  194 (204)
T ss_dssp             SC-CBCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred             CC-ceeCCCCchhhcccHHHHHHHHHHH
Confidence            45 999999999986 999999998764

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=88.00  E-value=0.38  Score=26.73  Aligned_cols=7  Identities=43%  Similarity=1.118  Sum_probs=4.3

Q ss_pred             eeCCCCc
Q psy12011         61 FQCPQCS   67 (94)
Q Consensus        61 ~~c~~c~   67 (94)
                      +.|+.|+
T Consensus       187 ~~CP~C~  193 (202)
T 1yuz_A          187 EKCPICF  193 (202)
T ss_dssp             SBCTTTC
T ss_pred             CCCCCCC
Confidence            6666665

>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}

Probab=87.63  E-value=0.41  Score=22.94  Aligned_cols=17  Identities=12%  Similarity=0.200  Sum_probs=7.5

Q ss_pred             eecCCCCccccchhccC
Q psy12011          9 HFCGLFPESFLTWSNLK   25 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~   25 (94)
                      ..|++|+..|.....+.
T Consensus        49 ~~CpYCg~~y~~~~~~~   65 (87)
T 2jz8_A           49 KICPYCSTLYRYDPSLS   65 (87)
T ss_dssp             ECCTTTCCEEECCTTSC
T ss_pred             EECCCCCCEeEcCCCCC
Confidence            34444444444444333

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=86.52  E-value=0.28  Score=24.20  Aligned_cols=68  Identities=19%  Similarity=0.362  Sum_probs=40.6

Q ss_pred             eecCCCCccccchhccC---C----------CCCCccccccchhhccChHHHHcchhhhcCCCCceeCC---CCcccccc
Q psy12011          9 HFCGLFPESFLTWSNLK---P----------NLNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCP---QCSYRTKR   72 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~---~----------~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~---~c~~~f~~   72 (94)
                      +-|+.|+..+.....+.   |          ..++--.|..|...+..-   ..    +..+.- |.|.   .|.++|.+
T Consensus         2 hfC~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rV---e~----~~~~~i-f~C~~~~~CkrtyLs   73 (101)
T 3vk6_A            2 HFCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRI---EQ----CTRGSL-FMCSIVQGCKRTYLS   73 (101)
T ss_dssp             CBCTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEE---EE----EEGGGC-CCCCCCCCCCCCCSS
T ss_pred             eecCccCCCeEEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeee---EE----eccCCE-EECCCCCCHHHHhcC
Confidence            45777777776666655   1          112334577776554331   11    112344 7776   47788888


Q ss_pred             hhHHHHHHHHhc
Q psy12011         73 KGNLKSHLAIRH   84 (94)
Q Consensus        73 ~~~l~~h~~~~~   84 (94)
                      .-+|+.|...-|
T Consensus        74 ~rdlqaHI~~~H   85 (101)
T 3vk6_A           74 QRDLQAHINHRH   85 (101)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh
Confidence            888888887544

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=86.34  E-value=0.65  Score=20.89  Aligned_cols=32  Identities=19%  Similarity=0.537  Sum_probs=19.7

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccc
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKR   72 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~   72 (94)
                      ...|.|..|+..+...           ...+ .+|++||.....
T Consensus        19 ~v~Y~C~~Cg~~~~l~-----------~~~~-iRC~~CG~RILy   50 (63)
T 3h0g_L           19 TMIYLCADCGARNTIQ-----------AKEV-IRCRECGHRVMY   50 (63)
T ss_dssp             CCCCBCSSSCCBCCCC-----------SSSC-CCCSSSCCCCCB
T ss_pred             CeEEECCCCCCeeecC-----------CCCc-eECCCCCcEEEE
Confidence            4567788887666533           1134 788888765543

>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}

Probab=85.65  E-value=0.57  Score=21.66  Aligned_cols=11  Identities=18%  Similarity=0.667  Sum_probs=6.1

Q ss_pred             eeCCCCccccc
Q psy12011         61 FQCPQCSYRTK   71 (94)
Q Consensus        61 ~~c~~c~~~f~   71 (94)
                      |.|..|++.|.
T Consensus        45 W~C~~C~~~~A   55 (72)
T 3jyw_9           45 WTCSCCKKTVA   55 (72)
T ss_dssp             BCCSSSCCCCC
T ss_pred             EECCCCCCEEe
Confidence            55666655544

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=83.61  E-value=0.86  Score=24.62  Aligned_cols=11  Identities=18%  Similarity=0.842  Sum_probs=6.0

Q ss_pred             Cccccccchhh
Q psy12011         30 GMFACDLCDKE   40 (94)
Q Consensus        30 k~~~c~~c~~~   40 (94)
                      ..|.|..||..
T Consensus       137 ~~~~C~~CG~i  147 (170)
T 3pwf_A          137 KVYICPICGYT  147 (170)
T ss_dssp             CEEECTTTCCE
T ss_pred             CeeEeCCCCCe
Confidence            34566666643

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=82.96  E-value=1.5  Score=17.31  Aligned_cols=22  Identities=14%  Similarity=0.247  Sum_probs=14.5

Q ss_pred             eeCCCCcccccchhHHHHHHHH
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAI   82 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~   82 (94)
                      +.|..|+-.|.+..++..|++-
T Consensus         9 ~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            9 KYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHHH
T ss_pred             CeeccccceehhhHHHhhhhee
Confidence            6666676667666666666653

>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6

Probab=82.70  E-value=0.65  Score=21.52  Aligned_cols=26  Identities=27%  Similarity=0.436  Sum_probs=20.2

Q ss_pred             eeCCCCccccc---chhHHHHHHHHhcCc
Q psy12011         61 FQCPQCSYRTK---RKGNLKSHLAIRHEC   86 (94)
Q Consensus        61 ~~c~~c~~~f~---~~~~l~~h~~~~~~~   86 (94)
                      ..|..|.+.+.   ..++|.+|++.+|++
T Consensus        30 a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~   58 (73)
T 2ct5_A           30 IYCRICMAQIAYSGNTSNLSYHLEKNHPE   58 (73)
T ss_dssp             CEETTTTEECCCCSSTHHHHHHHHHSCHH
T ss_pred             EECCCCCccccCCCChHhHHHHHHHHCHH
Confidence            67888887754   568999999887753

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=81.90  E-value=0.73  Score=19.32  Aligned_cols=7  Identities=43%  Similarity=1.459  Sum_probs=4.1

Q ss_pred             eeCCCCc
Q psy12011         61 FQCPQCS   67 (94)
Q Consensus        61 ~~c~~c~   67 (94)
                      |.|++|+
T Consensus        31 w~CP~Cg   37 (46)
T 6rxn_A           31 WCCPVCG   37 (46)
T ss_dssp             CBCTTTC
T ss_pred             CcCcCCC
Confidence            5566665

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=81.05  E-value=1.2  Score=20.48  Aligned_cols=30  Identities=17%  Similarity=0.551  Sum_probs=19.4

Q ss_pred             CCCccccccchhhccChHHHHcchhhhcCCCCceeCCCCccc
Q psy12011         28 LNGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYR   69 (94)
Q Consensus        28 ~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~   69 (94)
                      ....|.|..||..|...           .... ..|+.||..
T Consensus        25 ~~v~Y~C~~CG~~~e~~-----------~~d~-irCp~CG~R   54 (70)
T 1twf_L           25 ATLKYICAECSSKLSLS-----------RTDA-VRCKDCGHR   54 (70)
T ss_dssp             CCCCEECSSSCCEECCC-----------TTST-TCCSSSCCC
T ss_pred             ceEEEECCCCCCcceeC-----------CCCC-ccCCCCCce
Confidence            34567888888776543           1133 678888874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	94
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.8
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.62
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.58
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.56
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.51
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.44
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.42
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.39
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.39
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.38
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.38
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.37
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.37
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.37
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.32
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.3
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.29
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.25
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.22
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.21
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.2
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.17
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.17
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.15
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.14
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.14
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.14
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.11
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.94
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.88
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.82
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.81
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.81
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.81
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.75
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.74
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.63
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.57
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.56
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.49
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.46
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.42
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.36
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.28
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.26
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.25
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.24
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.16
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.96
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.95
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.92
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.91
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.9
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.89
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.88
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.86
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.73
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.72
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.71
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.69
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.67
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.64
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.64
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.63
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.6
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.52
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.5
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.46
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.37
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.28
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.26
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.2
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.19
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.96
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.93
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.79
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.68
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.6
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.28
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.2
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.77
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.73
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	95.69
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.65
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.49
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	95.38
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.37
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	95.16
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.57
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	94.51
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.79
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	93.01
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	92.91
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.73
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.57
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.86
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	89.4
d1zina2	35	Microbial and mitochondrial ADK, insert "zinc fing	89.11
d1s3ga2	35	Microbial and mitochondrial ADK, insert "zinc fing	87.91
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	86.5
d1e4va2	35	Microbial and mitochondrial ADK, insert "zinc fing	86.28
d2j9ub1	47	Vacuolar protein-sorting-associated protein 36, VP	84.86
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	83.95
d1lkoa2	44	Rubrerythrin, C-terminal domain {Desulfovibrio vul	83.75
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	81.81

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2e-20  Score=82.58  Aligned_cols=53  Identities=26%  Similarity=0.581  Sum_probs=50.4

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCCCCceeCCCCcccccchhHHHHHHHHh
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIR   83 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~   83 (94)
                      ||+|+| .||+.|.....|..|+++|.+++| |.|.+||+.|...++|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekp-y~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccC-CcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 599999999999999999999988 99999999999999999999886

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=5.4e-17  Score=71.34  Aligned_cols=48  Identities=25%  Similarity=0.336  Sum_probs=45.1

Q ss_pred             CceeecCCCCccccchhccC-----CCCCCccccccchhhccChHHHHcchhhh
Q psy12011          6 LQVHFCGLFPESFLTWSNLK-----PNLNGMFACDLCDKEYKYKRNLYSHKKDE   54 (94)
Q Consensus         6 ~~~~~c~~c~~~~~~~~~l~-----~~~~k~~~c~~c~~~~~~~~~l~~h~~~~   54 (94)
                      ||||.| .||+.|.....|.     |++++||.|.+|++.|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 5999999999998     89999999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.1e-15  Score=62.36  Aligned_cols=36  Identities=17%  Similarity=0.402  Sum_probs=32.0

Q ss_pred             CCCceeCCCCcccccchhHHHHHHH-HhcCcccCCCCC
Q psy12011         57 QEPRFQCPQCSYRTKRKGNLKSHLA-IRHECYLDDSAN   93 (94)
Q Consensus        57 ~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~c~~   93 (94)
                      ++| |.|.+||+.|...++|.+|++ +|++++||+|.+
T Consensus         3 ~Kp-y~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKP-YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCC-EECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCC-ccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            466 999999999999999999976 799999999964

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=7.6e-16  Score=62.86  Aligned_cols=37  Identities=11%  Similarity=0.282  Sum_probs=34.0

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      +|+.+|++++| |.|.+||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekp-y~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRR-YKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCS-SBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCC-EecCCCCceeeCHHHHHHhCccCCCC
Confidence            57889999888 99999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=8.4e-15  Score=57.59  Aligned_cols=33  Identities=21%  Similarity=0.453  Sum_probs=28.4

Q ss_pred             hhcCCCCceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         53 DECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        53 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      +|+|++| |.|.+||++|...++|..|+++|++|
T Consensus         1 IHTgekp-y~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKP-YGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCC-EECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCC-eeCCCCCCEeCchHHhHhhccccCCC
Confidence            4678787 99999999999999999999999876

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=5.3e-14  Score=56.53  Aligned_cols=34  Identities=24%  Similarity=0.596  Sum_probs=30.1

Q ss_pred             hhhcCCCCceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         52 KDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        52 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      ++|+|++| |.|.+|+++|...++|..|+++|+++
T Consensus         1 R~HTgekP-y~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKP-YACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCC-EECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCC-EECCCCCCCcCCHhHHHHhCcccCCC
Confidence            46888888 99999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.42  E-value=5.6e-14  Score=56.84  Aligned_cols=36  Identities=28%  Similarity=0.547  Sum_probs=32.1

Q ss_pred             cchhhhcCCCCceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         49 SHKKDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        49 ~h~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      .|++.|+|++| |.|.+|++.|...++|..|+++|..
T Consensus         1 gh~R~HTgeKP-y~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           1 GSTRGSTGIKP-FQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CCSSTTCCSSS-BCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCccCCccC-eEeCCCCCEecCHHHHHHHHhcCcC
Confidence            37789999888 9999999999999999999998864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.39  E-value=1.2e-13  Score=52.80  Aligned_cols=28  Identities=25%  Similarity=0.431  Sum_probs=25.4

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      ||.|.+|+++|...+.|.+|+++|+||+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            3999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1e-13  Score=56.44  Aligned_cols=37  Identities=22%  Similarity=0.536  Sum_probs=32.8

Q ss_pred             CCCccccccchhhccChHHHHcchh-hhcCCCCceeCCC
Q psy12011         28 LNGMFACDLCDKEYKYKRNLYSHKK-DECGQEPRFQCPQ   65 (94)
Q Consensus        28 ~~k~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~~~~c~~   65 (94)
                      .+|||.|.+||+.|...+.|..|++ +|++++| |.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekp-y~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcC-cCCcC
Confidence            5789999999999999999999976 7999888 99863

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.1e-13  Score=54.39  Aligned_cols=32  Identities=19%  Similarity=0.398  Sum_probs=29.3

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      |++++||+|.+|+++|...+.|..|+++|+|+
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            68899999999999999999999999999885

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=2.9e-13  Score=53.80  Aligned_cols=33  Identities=27%  Similarity=0.564  Sum_probs=27.7

Q ss_pred             hcCCCCceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         54 ECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        54 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      ++|++| |.|.+|++.|...++|.+|+++|+...
T Consensus         2 ~TGekP-y~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRP-FVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSC-EECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcc-ccCCCCCCcccChHHHHHHccccCCcC
Confidence            567777 999999999999999999999887653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=2.4e-13  Score=51.40  Aligned_cols=28  Identities=32%  Similarity=0.657  Sum_probs=24.3

Q ss_pred             CCCceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         57 QEPRFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        57 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      ++| |.|.+|++.|...++|.+|+++|+|
T Consensus         1 EKP-y~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKP-FQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCC-EECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcC-ccCCCCcCEecccccccccCCCccC
Confidence            356 9999999999999999999999876

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=3.1e-13  Score=54.10  Aligned_cols=32  Identities=25%  Similarity=0.472  Sum_probs=29.8

Q ss_pred             eeCCC--CcccccchhHHHHHHHHhcCcccCCCC
Q psy12011         61 FQCPQ--CSYRTKRKGNLKSHLAIRHECYLDDSA   92 (94)
Q Consensus        61 ~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~c~   92 (94)
                      |.|..  |++.|.....|.+|+++|++++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            77876  999999999999999999999999996

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.2e-13  Score=51.98  Aligned_cols=28  Identities=29%  Similarity=0.680  Sum_probs=24.7

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      ||.|.+|++.|...++|.+|+++|++++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCcC
Confidence            3899999999999999999999999875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=7.2e-13  Score=53.08  Aligned_cols=34  Identities=26%  Similarity=0.685  Sum_probs=28.5

Q ss_pred             hhhcCCCCceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         52 KDECGQEPRFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        52 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      ++|+|++| |.|..|++.|...++|.+|++.++++
T Consensus         1 R~HTgekP-~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKP-YECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCS-EECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCC-EeCCCCcccccchHHHHHHcccccCC
Confidence            36888888 99999999999999999998766554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.30  E-value=2.5e-13  Score=57.55  Aligned_cols=40  Identities=28%  Similarity=0.424  Sum_probs=34.5

Q ss_pred             HHHcchhhhcCCCCceeCCC--CcccccchhHHHHHHHHhcCcc
Q psy12011         46 NLYSHKKDECGQEPRFQCPQ--CSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        46 ~l~~h~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      .+..|+. |.+++| |.|..  |++.|...++|..|+++|++++
T Consensus         6 ~l~~h~~-h~gekp-y~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKT-FECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTE-EECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCC-eECCcCCCCccccCchHHHhhcccccCCC
Confidence            3556664 889888 99977  9999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6.5e-13  Score=53.95  Aligned_cols=33  Identities=21%  Similarity=0.570  Sum_probs=30.7

Q ss_pred             CCCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011         25 KPNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        25 ~~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      .|++++||.|++||++|...+.|..|+++|+|+
T Consensus         6 ~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           6 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            389999999999999999999999999999985

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=2.4e-12  Score=47.52  Aligned_cols=25  Identities=20%  Similarity=0.503  Sum_probs=21.1

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhc
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      ||+|.+||++|...++|..|+++|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCCC
Confidence            3888888888888888888888874

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.7e-12  Score=51.43  Aligned_cols=32  Identities=28%  Similarity=0.401  Sum_probs=28.6

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      |++++||.|.+|+++|...+.|..|++.|+++
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            78899999999999999999999999998763

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=3.6e-12  Score=50.54  Aligned_cols=32  Identities=22%  Similarity=0.345  Sum_probs=27.9

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcCC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      +++++||+|.+|++.|...+.|..|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            57889999999999999999999999998763

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=2.1e-12  Score=48.73  Aligned_cols=28  Identities=21%  Similarity=0.610  Sum_probs=26.1

Q ss_pred             CCccccccchhhccChHHHHcchhhhcC
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      ||||+|++|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999976

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=6.1e-12  Score=47.86  Aligned_cols=29  Identities=28%  Similarity=0.490  Sum_probs=27.0

Q ss_pred             CccccccchhhccChHHHHcchhhhcCCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQE   58 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~~   58 (94)
                      |||.|.+|++.|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.17  E-value=5.2e-12  Score=48.11  Aligned_cols=29  Identities=17%  Similarity=0.608  Sum_probs=26.9

Q ss_pred             CccccccchhhccChHHHHcchhhhcCCC
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDECGQE   58 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~~~~   58 (94)
                      +||.|++|++.|...+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999964

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.6e-11  Score=46.97  Aligned_cols=27  Identities=30%  Similarity=0.434  Sum_probs=24.2

Q ss_pred             ceeCCC--CcccccchhHHHHHHHHhcCc
Q psy12011         60 RFQCPQ--CSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        60 ~~~c~~--c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      ||.|..  |+++|...++|.+|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            389988  999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=5.1e-12  Score=46.62  Aligned_cols=26  Identities=19%  Similarity=0.459  Sum_probs=24.1

Q ss_pred             CccccccchhhccChHHHHcchhhhc
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~   55 (94)
                      |||+|++||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999884

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=1.2e-11  Score=49.76  Aligned_cols=31  Identities=23%  Similarity=0.364  Sum_probs=28.5

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      |+++|||.|.+|++.|...+.|..|++.|.+
T Consensus         6 HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           6 STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             cCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            8899999999999999999999999998864

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=2e-11  Score=46.75  Aligned_cols=27  Identities=33%  Similarity=0.529  Sum_probs=24.3

Q ss_pred             ceeCCC--CcccccchhHHHHHHHHhcCc
Q psy12011         60 RFQCPQ--CSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        60 ~~~c~~--c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      ||.|..  |+++|...++|.+|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            399977  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2.5e-11  Score=46.85  Aligned_cols=28  Identities=25%  Similarity=0.425  Sum_probs=24.5

Q ss_pred             ceeCC--CCcccccchhHHHHHHHHhcCcc
Q psy12011         60 RFQCP--QCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        60 ~~~c~--~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      ||.|+  .|++.|...++|.+|+++|++++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            38885  69999999999999999999885

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.6e-11  Score=48.43  Aligned_cols=31  Identities=10%  Similarity=0.273  Sum_probs=25.1

Q ss_pred             CCCCCccccccchhhccChHHHHcchhhhcC
Q psy12011         26 PNLNGMFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        26 ~~~~k~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      |++++||.|+.|++.|.....|..|+..+++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            6788888888888888888888888765554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=2.9e-10  Score=43.01  Aligned_cols=26  Identities=31%  Similarity=0.737  Sum_probs=23.0

Q ss_pred             ceeCCC--CcccccchhHHHHHHHHhcC
Q psy12011         60 RFQCPQ--CSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        60 ~~~c~~--c~~~f~~~~~l~~h~~~~~~   85 (94)
                      ||.|..  |+++|...++|.+|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            399977  99999999999999999976

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.88  E-value=9.7e-10  Score=42.47  Aligned_cols=28  Identities=25%  Similarity=0.513  Sum_probs=23.5

Q ss_pred             CCceeCCC--CcccccchhHHHHHHHHhcCc
Q psy12011         58 EPRFQCPQ--CSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        58 ~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      +| |.|..  |++.|...++|.+|+++|+..
T Consensus         2 rP-~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           2 RP-YSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CS-BCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             cC-eECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            55 88877  999999999999999988764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=3.1e-10  Score=47.82  Aligned_cols=35  Identities=26%  Similarity=0.485  Sum_probs=31.1

Q ss_pred             cCCCCCCcccccc--chhhccChHHHHcchhhhcCCC
Q psy12011         24 LKPNLNGMFACDL--CDKEYKYKRNLYSHKKDECGQE   58 (94)
Q Consensus        24 l~~~~~k~~~c~~--c~~~~~~~~~l~~h~~~~~~~~   58 (94)
                      +.|.+++||.|..  |++.|...+.|..|+++|+|++
T Consensus        11 ~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3488999999976  9999999999999999999864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=9.2e-10  Score=41.18  Aligned_cols=25  Identities=32%  Similarity=0.668  Sum_probs=22.2

Q ss_pred             ceeCCC--CcccccchhHHHHHHHHhc
Q psy12011         60 RFQCPQ--CSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        60 ~~~c~~--c~~~f~~~~~l~~h~~~~~   84 (94)
                      ||.|..  |+++|...++|.+|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            388977  9999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=6.9e-10  Score=44.11  Aligned_cols=32  Identities=28%  Similarity=0.742  Sum_probs=28.1

Q ss_pred             cccc--cchhhccChHHHHcchhhhcCCCCceeCC
Q psy12011         32 FACD--LCDKEYKYKRNLYSHKKDECGQEPRFQCP   64 (94)
Q Consensus        32 ~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~c~   64 (94)
                      |.|.  .|++.|.....|..|+++|+|++| |.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekp-y~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCC-EeCC
Confidence            5565  499999999999999999999998 9985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=9.4e-10  Score=41.90  Aligned_cols=28  Identities=29%  Similarity=0.608  Sum_probs=25.1

Q ss_pred             Ccccccc--chhhccChHHHHcchhhhcCC
Q psy12011         30 GMFACDL--CDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        30 k~~~c~~--c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      |||.|..  |++.|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5888977  999999999999999999885

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1.4e-09  Score=41.47  Aligned_cols=28  Identities=29%  Similarity=0.627  Sum_probs=24.8

Q ss_pred             Ccccccc--chhhccChHHHHcchhhhcCC
Q psy12011         30 GMFACDL--CDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        30 k~~~c~~--c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      |||.|+.  |++.|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5888865  999999999999999999885

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2.5e-09  Score=41.07  Aligned_cols=29  Identities=28%  Similarity=0.662  Sum_probs=25.4

Q ss_pred             Ccccc--ccchhhccChHHHHcchhhhcCCC
Q psy12011         30 GMFAC--DLCDKEYKYKRNLYSHKKDECGQE   58 (94)
Q Consensus        30 k~~~c--~~c~~~~~~~~~l~~h~~~~~~~~   58 (94)
                      +||.|  +.|++.|...+.|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            57888  469999999999999999999864

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=2e-08  Score=36.00  Aligned_cols=26  Identities=19%  Similarity=0.369  Sum_probs=21.6

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      ..|.+||++|..++.|++|+..|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            57888888888888888888888875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.8e-08  Score=35.39  Aligned_cols=25  Identities=28%  Similarity=0.541  Sum_probs=17.6

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      .+|..|++.|+....|..|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            5677777777777777777776654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=9.8e-09  Score=38.68  Aligned_cols=27  Identities=26%  Similarity=0.646  Sum_probs=23.1

Q ss_pred             Ccccccc--chhhccChHHHHcchhhhcC
Q psy12011         30 GMFACDL--CDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        30 k~~~c~~--c~~~~~~~~~l~~h~~~~~~   56 (94)
                      |||.|..  |++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788855  99999999999999999875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=3.5e-08  Score=37.97  Aligned_cols=28  Identities=32%  Similarity=0.680  Sum_probs=24.3

Q ss_pred             CCcccccc--chhhccChHHHHcchhhhcC
Q psy12011         29 NGMFACDL--CDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        29 ~k~~~c~~--c~~~~~~~~~l~~h~~~~~~   56 (94)
                      ++||.|..  |++.|...+.|..|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            57888866  99999999999999999875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=7.4e-08  Score=36.16  Aligned_cols=29  Identities=14%  Similarity=0.083  Sum_probs=20.0

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcccC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECYLD   89 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~   89 (94)
                      ..|..||+.|.-.-.|.+|...|+++|||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            56667777776666667777777777766

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=9.5e-08  Score=34.58  Aligned_cols=26  Identities=31%  Similarity=0.620  Sum_probs=22.6

Q ss_pred             CCceeCCCCcccccchhHHHHHHHHhc
Q psy12011         58 EPRFQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      +| |.|..||+.|..+....+|.++|.
T Consensus         2 kP-f~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KP-FACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CC-EECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CC-cccchhhhhhhcchhhhhhhhhcc
Confidence            55 999999999999999999988874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=4.1e-08  Score=34.47  Aligned_cols=26  Identities=27%  Similarity=0.590  Sum_probs=22.3

Q ss_pred             ccccccchhhccChHHHHcchhhhcC
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~   56 (94)
                      |++|+.|++.|..+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57888999999999999999998865

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=1.3e-07  Score=33.98  Aligned_cols=28  Identities=29%  Similarity=0.687  Sum_probs=23.7

Q ss_pred             CCceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         58 EPRFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      +| |+|..|......++.|..|++.|+|+
T Consensus         2 rp-fkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RP-FKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CC-EECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             Cc-ceeeecccccCCchheEEeeecccCc
Confidence            45 99999988888889999999988874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.2e-07  Score=35.56  Aligned_cols=32  Identities=28%  Similarity=0.679  Sum_probs=27.8

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCCCCce
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQEPRF   61 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~   61 (94)
                      .+...|+.||+.|.....|.+|...|.+++| |
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekp-y   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKP-Y   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCC-C
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCC-C
Confidence            4567799999999999999999999999887 5

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=6.5e-08  Score=35.99  Aligned_cols=26  Identities=27%  Similarity=0.593  Sum_probs=18.9

Q ss_pred             Ccccccc--chhhccChHHHHcchhhhc
Q psy12011         30 GMFACDL--CDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus        30 k~~~c~~--c~~~~~~~~~l~~h~~~~~   55 (94)
                      +||.|..  |++.|...+.|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677755  7777777777888887764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=5.7e-07  Score=32.41  Aligned_cols=27  Identities=26%  Similarity=0.642  Sum_probs=23.6

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      |.|.+|+......+-|+.|+++|+++.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            788999999999999999999998863

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=2.3e-07  Score=33.52  Aligned_cols=27  Identities=26%  Similarity=0.554  Sum_probs=22.2

Q ss_pred             CCccccccchhhccChHHHHcchhhhc
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~   55 (94)
                      ++||.|+.||+.|..+.....|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578889999988888888888887764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=2.9e-07  Score=32.88  Aligned_cols=26  Identities=23%  Similarity=0.475  Sum_probs=22.5

Q ss_pred             cccccchhhccChHHHHcchhhhcCC
Q psy12011         32 FACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      +.|.+||+.|..++.|.+|+..|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            56888999999999999999988874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.2e-06  Score=32.11  Aligned_cols=28  Identities=32%  Similarity=0.765  Sum_probs=21.0

Q ss_pred             CCceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         58 EPRFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      +| |.|++|...|....-+..|.++|.|.
T Consensus         2 kp-~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KP-YSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CS-SEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CC-cccchHHHHhhccccceEeeecccCc
Confidence            45 78888888888877777777777654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=5.3e-06  Score=30.28  Aligned_cols=25  Identities=24%  Similarity=0.586  Sum_probs=18.9

Q ss_pred             eeCCC--CcccccchhHHHHHHHHhcC
Q psy12011         61 FQCPQ--CSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        61 ~~c~~--c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |.|..  |++++...++|+.|++++||
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhCC
Confidence            77765  77888888888888877664

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=2.5e-06  Score=31.19  Aligned_cols=29  Identities=21%  Similarity=0.533  Sum_probs=22.9

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCC
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      +|||.|++|...|..+..+.-|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57888888888888888888888887764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=2.5e-06  Score=30.52  Aligned_cols=29  Identities=21%  Similarity=0.502  Sum_probs=25.0

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCC
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      ++||+|..|...-..++.|.-|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57899999998888899999999998873

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.91  E-value=4.4e-06  Score=28.88  Aligned_cols=23  Identities=22%  Similarity=0.520  Sum_probs=16.6

Q ss_pred             eeCCCCcccccchhHHHHHHHHh
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIR   83 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~   83 (94)
                      |+|..|.++|...+.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45667777777777777777765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.90  E-value=7.2e-06  Score=29.40  Aligned_cols=24  Identities=29%  Similarity=0.696  Sum_probs=20.5

Q ss_pred             ceeCCC--CcccccchhHHHHHHHHh
Q psy12011         60 RFQCPQ--CSYRTKRKGNLKSHLAIR   83 (94)
Q Consensus        60 ~~~c~~--c~~~f~~~~~l~~h~~~~   83 (94)
                      ||.|+.  |++.|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            488865  889999999999998877

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=8.7e-06  Score=28.86  Aligned_cols=26  Identities=31%  Similarity=0.839  Sum_probs=21.8

Q ss_pred             CCceeCCCCcccccchhHHHHHHHHhc
Q psy12011         58 EPRFQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      +| ++|..|+.+-.-+++|..|+++|.
T Consensus         2 kp-~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KP-YKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CS-EECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CC-cccccccchhcchhhHhhhhhccc
Confidence            44 899999988888888999998875

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.88  E-value=3.1e-06  Score=29.26  Aligned_cols=24  Identities=25%  Similarity=0.661  Sum_probs=21.7

Q ss_pred             cccccchhhccChHHHHcchhhhc
Q psy12011         32 FACDLCDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~~~~   55 (94)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            579999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.86  E-value=9.7e-06  Score=28.41  Aligned_cols=26  Identities=27%  Similarity=0.346  Sum_probs=21.1

Q ss_pred             eCCCCcccccchhHHHHHHHHhcCcc
Q psy12011         62 QCPQCSYRTKRKGNLKSHLAIRHECY   87 (94)
Q Consensus        62 ~c~~c~~~f~~~~~l~~h~~~~~~~~   87 (94)
                      +|+.|.+.|.+.--|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57888888888888888888888875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=2.1e-05  Score=28.37  Aligned_cols=26  Identities=35%  Similarity=0.887  Sum_probs=22.9

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      ||+|..|.....-+++|..|.++.|.
T Consensus         2 py~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             Cccccccccccccchhhhhhhhcccc
Confidence            39999999999999999999998654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.8e-05  Score=28.39  Aligned_cols=25  Identities=32%  Similarity=0.796  Sum_probs=21.8

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhc
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      ||.|..|..+|...++|..|+++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            5899999999999999999998643

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=4.6e-05  Score=27.28  Aligned_cols=28  Identities=21%  Similarity=0.472  Sum_probs=24.3

Q ss_pred             CCceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         58 EPRFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      .. |.|..|.-.|...-.|+.|+-.|+|+
T Consensus         3 qv-ftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QV-FTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CC-EECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ce-EEeHHHHHHHHHHHhheeeeecccCC
Confidence            45 89999999999999999999998875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=9.5e-06  Score=31.96  Aligned_cols=22  Identities=18%  Similarity=0.709  Sum_probs=9.9

Q ss_pred             CCccccccchhhccChHHHHcc
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSH   50 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h   50 (94)
                      -|||.|.+|++.|-...++.+|
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH   24 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRH   24 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHh
Confidence            3444444444444444444443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=9.7e-06  Score=29.57  Aligned_cols=27  Identities=33%  Similarity=0.632  Sum_probs=21.7

Q ss_pred             Ccccccc--chhhccChHHHHcchhhhcC
Q psy12011         30 GMFACDL--CDKEYKYKRNLYSHKKDECG   56 (94)
Q Consensus        30 k~~~c~~--c~~~~~~~~~l~~h~~~~~~   56 (94)
                      |||.|..  |++.+..+++|..|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5777744  88999999999999987654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.5e-05  Score=29.31  Aligned_cols=27  Identities=15%  Similarity=0.320  Sum_probs=21.0

Q ss_pred             ceeCCC--CcccccchhHHHHHH-HHhcCc
Q psy12011         60 RFQCPQ--CSYRTKRKGNLKSHL-AIRHEC   86 (94)
Q Consensus        60 ~~~c~~--c~~~f~~~~~l~~h~-~~~~~~   86 (94)
                      ||.|..  |.++|+..++...|+ |+|..+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CccccCCChhhhhcchhhhhhhccccccCC
Confidence            388866  889999888888886 777643

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.64  E-value=1.4e-05  Score=31.20  Aligned_cols=25  Identities=16%  Similarity=0.530  Sum_probs=13.8

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |.|..|++.|.+..+|--|++.|..
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             cCCCCCCCccCCcccccchHhhhcc
Confidence            5555555555555555555555543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.63  E-value=3.4e-05  Score=30.07  Aligned_cols=30  Identities=17%  Similarity=0.476  Sum_probs=26.4

Q ss_pred             CCccccccchhhccChHHHHcchhhhcCCC
Q psy12011         29 NGMFACDLCDKEYKYKRNLYSHKKDECGQE   58 (94)
Q Consensus        29 ~k~~~c~~c~~~~~~~~~l~~h~~~~~~~~   58 (94)
                      .+.|+|..|++.|.....|-.|+..|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            457999999999999999999999996644

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=4.8e-05  Score=27.35  Aligned_cols=27  Identities=37%  Similarity=0.680  Sum_probs=23.1

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      ||+|..|.......++|..|++..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CcccceecccccCcchHHHHHHHHccC
Confidence            499999988888999999999887765

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.52  E-value=4.9e-05  Score=27.92  Aligned_cols=25  Identities=24%  Similarity=0.434  Sum_probs=20.3

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhc
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      ||.|..|++.|+...-|.+|++.-|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            5889999999998888888887543

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=3.1e-05  Score=27.76  Aligned_cols=26  Identities=19%  Similarity=0.368  Sum_probs=23.0

Q ss_pred             cccccchhhccChHHHHcchhhhcCC
Q psy12011         32 FACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      |.|..||....-++.|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            67888998889999999999999875

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=0.0001  Score=26.13  Aligned_cols=26  Identities=31%  Similarity=0.579  Sum_probs=22.2

Q ss_pred             ceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |-+|++|..+..+...|+.|.++|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            37899999999999999999998854

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.37  E-value=0.00013  Score=26.17  Aligned_cols=26  Identities=19%  Similarity=0.333  Sum_probs=21.0

Q ss_pred             eeCCC--CcccccchhHHHHHHHHhcCc
Q psy12011         61 FQCPQ--CSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        61 ~~c~~--c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      |.|..  |.+.|.....|.+|..+|+++
T Consensus         3 fpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           3 FPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             EECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             cCcccccccccchhhhhhhhhhccccCC
Confidence            77754  778888888888888888875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=6.4e-05  Score=26.56  Aligned_cols=26  Identities=19%  Similarity=0.353  Sum_probs=22.7

Q ss_pred             CccccccchhhccChHHHHcchhhhc
Q psy12011         30 GMFACDLCDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus        30 k~~~c~~c~~~~~~~~~l~~h~~~~~   55 (94)
                      |||+|..|...-...++|..|++.|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            78899999988888999999998874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=7.6e-05  Score=26.06  Aligned_cols=26  Identities=27%  Similarity=0.606  Sum_probs=20.8

Q ss_pred             ccccchhhccChHHHHcchhhhcCCC
Q psy12011         33 ACDLCDKEYKYKRNLYSHKKDECGQE   58 (94)
Q Consensus        33 ~c~~c~~~~~~~~~l~~h~~~~~~~~   58 (94)
                      +|+.|.+.|..+.-|.-|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57888888888888888888887753

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=0.00027  Score=24.24  Aligned_cols=22  Identities=32%  Similarity=0.745  Sum_probs=15.9

Q ss_pred             ceeCCCCcccccchhHHHHHHH
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLA   81 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~   81 (94)
                      ||+|+.|...|.....|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            3777777777777777777764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00031  Score=27.52  Aligned_cols=26  Identities=23%  Similarity=0.663  Sum_probs=22.0

Q ss_pred             CCCCceeCCCCcccccchhHHHHHHHH
Q psy12011         56 GQEPRFQCPQCSYRTKRKGNLKSHLAI   82 (94)
Q Consensus        56 ~~~~~~~c~~c~~~f~~~~~l~~h~~~   82 (94)
                      |-+| |.|..|++.|.-..++.+|...
T Consensus         2 GiKP-YeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKP-YECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCC-EECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCc-eeccchhhhhhhHHHHHHhhhh
Confidence            4456 9999999999999999988753

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.96  E-value=0.00019  Score=26.33  Aligned_cols=25  Identities=20%  Similarity=0.594  Sum_probs=20.2

Q ss_pred             ccccccchhhccChHHHHcchhhhc
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~   55 (94)
                      ||.|.+|++.|.....|.+|+..-+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            6889999999999888888876433

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.93  E-value=0.00047  Score=24.18  Aligned_cols=23  Identities=43%  Similarity=0.681  Sum_probs=18.5

Q ss_pred             ceeCCCCcccccchhHHHHHHHH
Q psy12011         60 RFQCPQCSYRTKRKGNLKSHLAI   82 (94)
Q Consensus        60 ~~~c~~c~~~f~~~~~l~~h~~~   82 (94)
                      ||+|..||+.+....+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            48889999888888888887653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00074  Score=23.74  Aligned_cols=23  Identities=39%  Similarity=0.823  Sum_probs=20.9

Q ss_pred             eeCCCCcccccchhHHHHHHHHh
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIR   83 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~   83 (94)
                      |+|+.|+.....+++|+.|++.-
T Consensus         3 ~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCcchhheeehhhhhHHhhhc
Confidence            89999999999999999999853

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.0014  Score=25.23  Aligned_cols=27  Identities=30%  Similarity=0.660  Sum_probs=21.8

Q ss_pred             CCCceeC--CCCcccccchhHHHHHHHHhc
Q psy12011         57 QEPRFQC--PQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        57 ~~~~~~c--~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      ++| |.|  +.|+..|.+...|..|...|.
T Consensus         4 dkP-F~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKP-FLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCC-EECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCc-eecCCCCccccccchHHHHHhhhhhe
Confidence            456 999  558899999999988888775

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00082  Score=25.32  Aligned_cols=22  Identities=14%  Similarity=-0.103  Sum_probs=13.4

Q ss_pred             CCcccccchhHHHHHHHHhcCc
Q psy12011         65 QCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        65 ~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      --++.|...-.|..|+|+|++|
T Consensus        12 R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          12 RELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCcchhHHHHHHHHhhcCCC
Confidence            3344566666666777776664

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.28  E-value=0.0016  Score=23.13  Aligned_cols=27  Identities=22%  Similarity=0.693  Sum_probs=19.4

Q ss_pred             ccccccchhhccChHHHHcchhhhcCC
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDECGQ   57 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~~~   57 (94)
                      -|.|..|...|...-.|..|+-.|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            466777777777777777777777663

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.0029  Score=23.58  Aligned_cols=25  Identities=20%  Similarity=0.465  Sum_probs=20.3

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcC
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |.|..|++.|.....+.+|.....+
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            8899999999998888888765443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.77  E-value=0.0087  Score=20.39  Aligned_cols=24  Identities=38%  Similarity=0.793  Sum_probs=20.6

Q ss_pred             eeCCCCcccccchhHHHHHHHHhc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      |.|+.|-+.|....++..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999998887644

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.0045  Score=25.01  Aligned_cols=23  Identities=22%  Similarity=0.392  Sum_probs=18.7

Q ss_pred             eeCCCCcccccchhHHHHHHHHh
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIR   83 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~   83 (94)
                      |.|-.|++.|.-...|+.|...|
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeccccccccCCHHHHhHhHHhc
Confidence            77888888888888888887765

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.69  E-value=0.0084  Score=22.36  Aligned_cols=29  Identities=24%  Similarity=0.542  Sum_probs=24.1

Q ss_pred             CCCCceeCCCCcccccchhHHHHHHHHhcC
Q psy12011         56 GQEPRFQCPQCSYRTKRKGNLKSHLAIRHE   85 (94)
Q Consensus        56 ~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   85 (94)
                      |+-. |.|..|.+.+...+++-+|-.+.|.
T Consensus         5 g~~~-yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHT-YRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTE-EECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcE-EEeehhhHHHHHHHHHHHHHHhhcc
Confidence            3345 9999999999999999999887654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.0021  Score=25.99  Aligned_cols=25  Identities=24%  Similarity=0.592  Sum_probs=21.3

Q ss_pred             ccccccchhhccChHHHHcchhhhc
Q psy12011         31 MFACDLCDKEYKYKRNLYSHKKDEC   55 (94)
Q Consensus        31 ~~~c~~c~~~~~~~~~l~~h~~~~~   55 (94)
                      -+.|..|++.|.....|.+|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4789999999999999998877764

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.013  Score=20.74  Aligned_cols=26  Identities=23%  Similarity=0.611  Sum_probs=20.7

Q ss_pred             eeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      |.|..||+...+...++.|....+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             eechhHHHHHhhccCceEEEeecccC
Confidence            78899999988888888887765543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.0032  Score=27.27  Aligned_cols=14  Identities=21%  Similarity=0.778  Sum_probs=6.5

Q ss_pred             CccccccchhhccC
Q psy12011         30 GMFACDLCDKEYKY   43 (94)
Q Consensus        30 k~~~c~~c~~~~~~   43 (94)
                      ..|.|+.|++.|..
T Consensus        13 ~~y~Cp~C~~~ys~   26 (62)
T d1vd4a_          13 ASFKCPVCSSTFTD   26 (62)
T ss_dssp             SEEECSSSCCEEEH
T ss_pred             CceECCCCCCCcch
Confidence            34445545444444

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.37  E-value=0.021  Score=22.94  Aligned_cols=30  Identities=33%  Similarity=0.648  Sum_probs=24.1

Q ss_pred             CCceeCCCCcccccchhHHHHHHHHhcCccc
Q psy12011         58 EPRFQCPQCSYRTKRKGNLKSHLAIRHECYL   88 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   88 (94)
                      .| -.|+.|+.....+-+|++|+..-|-.+|
T Consensus        23 qp-atcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          23 QP-ATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CC-EECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             CC-CCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            44 8899998888888899999887776554

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=95.16  E-value=0.0086  Score=22.98  Aligned_cols=26  Identities=15%  Similarity=0.333  Sum_probs=14.4

Q ss_pred             CCceeecCCCCccccchhccCCCCCCccccccch
Q psy12011          5 NLQVHFCGLFPESFLTWSNLKPNLNGMFACDLCD   38 (94)
Q Consensus         5 ~~~~~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~   38 (94)
                      +++.|+|..||-...        ++.|-.|+.|+
T Consensus         2 ~~~~~vC~vCGyi~~--------g~~Pe~CPvCg   27 (36)
T d1yuza2           2 DDKFHLCPICGYIHK--------GEDFEKCPICF   27 (36)
T ss_dssp             SCCEEECSSSCCEEE--------SSCCSBCTTTC
T ss_pred             CCCEEECCCCCCEee--------CCCCCcCCCCC
Confidence            345677777765422        23345566665

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.57  E-value=0.012  Score=20.35  Aligned_cols=21  Identities=24%  Similarity=0.344  Sum_probs=17.7

Q ss_pred             CCCcccccchhHHHHHHHHhc
Q psy12011         64 PQCSYRTKRKGNLKSHLAIRH   84 (94)
Q Consensus        64 ~~c~~~f~~~~~l~~h~~~~~   84 (94)
                      ..|+++|.....|+.|+-+|+
T Consensus         7 e~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           7 ENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TTCCCEESSHHHHHHHHHHHH
T ss_pred             cCchHHHhhccceEEEeeccc
Confidence            458999999999999988775

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.51  E-value=0.014  Score=22.50  Aligned_cols=25  Identities=16%  Similarity=0.312  Sum_probs=13.7

Q ss_pred             CceeecCCCCccccchhccCCCCCCccccccch
Q psy12011          6 LQVHFCGLFPESFLTWSNLKPNLNGMFACDLCD   38 (94)
Q Consensus         6 ~~~~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~   38 (94)
                      ++.|+|..||-.+.        ++.|-.|+.|+
T Consensus         3 ~~~~~C~vCG~i~~--------g~~P~~CPvCg   27 (37)
T d1nnqa2           3 KKVYICPICGYTAV--------DEAPEYCPVCG   27 (37)
T ss_dssp             SCEEECTTTCCEEE--------SCCCSBCTTTC
T ss_pred             CcEEECCCCCCEec--------CCCCCcCCCCC
Confidence            34567777765422        23355566665

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.79  E-value=0.022  Score=20.89  Aligned_cols=21  Identities=29%  Similarity=0.583  Sum_probs=17.1

Q ss_pred             eeCCCCcccccchhHHHHHHH
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLA   81 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~   81 (94)
                      |.|.-||-.|.+.+.|..|+.
T Consensus         9 f~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHTT
T ss_pred             eeccccceeecChhHHHhhhh
Confidence            788888888888888887764

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=93.01  E-value=0.04  Score=21.13  Aligned_cols=31  Identities=13%  Similarity=-0.161  Sum_probs=20.0

Q ss_pred             eeecCCCCccccchhccCCCCCCccccccchhhc
Q psy12011          8 VHFCGLFPESFLTWSNLKPNLNGMFACDLCDKEY   41 (94)
Q Consensus         8 ~~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~~   41 (94)
                      .++|+.||..|....+   .-.+.-.|+.||..+
T Consensus         2 R~vc~~cG~~Yh~~~~---pPk~~g~CD~cg~~L   32 (37)
T d2ak3a2           2 RWIHPGSGRVYNIEFN---PPKTMGIDDLTGEPL   32 (37)
T ss_dssp             EEEETTTTEEEETTTB---CCSSTTBCTTTCCBC
T ss_pred             ceeeCCcCChhhhccC---CccccCCccCCCCcC
Confidence            4678888888665553   334455788777543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.91  E-value=0.031  Score=24.05  Aligned_cols=28  Identities=32%  Similarity=0.678  Sum_probs=23.3

Q ss_pred             CCceeCCCCcccccchhHHHHHHHHhcCc
Q psy12011         58 EPRFQCPQCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        58 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      .. |+|..|+.-|.+...|..|+-.|..+
T Consensus        17 ~~-yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          17 ST-YQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             SC-EECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             ce-eeechhHHHHhhHHHHHHHHHhccHH
Confidence            44 99999999999999999998877654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.73  E-value=0.084  Score=18.89  Aligned_cols=22  Identities=18%  Similarity=0.324  Sum_probs=14.6

Q ss_pred             CCcccccchhHHHHHHHHhcCc
Q psy12011         65 QCSYRTKRKGNLKSHLAIRHEC   86 (94)
Q Consensus        65 ~c~~~f~~~~~l~~h~~~~~~~   86 (94)
                      .|+-.|.....|..|+-.|+||
T Consensus        10 dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          10 DCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GGCCEESSHHHHHHHHHHHHCC
T ss_pred             CcchhhccchhhhHHhhhhcCC
Confidence            3666666677777777777664

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.021  Score=25.03  Aligned_cols=22  Identities=27%  Similarity=0.484  Sum_probs=17.7

Q ss_pred             eeCCCCcccccchhHHHHHHHH
Q psy12011         61 FQCPQCSYRTKRKGNLKSHLAI   82 (94)
Q Consensus        61 ~~c~~c~~~f~~~~~l~~h~~~   82 (94)
                      |-|..|++.|.+...|..|+++
T Consensus        16 fYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             EecccccCccCCHHHHHHHHcc
Confidence            7788888888888888888764

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.86  E-value=0.093  Score=18.29  Aligned_cols=19  Identities=16%  Similarity=0.424  Sum_probs=14.7

Q ss_pred             CCcccccchhHHHHHHHHh
Q psy12011         65 QCSYRTKRKGNLKSHLAIR   83 (94)
Q Consensus        65 ~c~~~f~~~~~l~~h~~~~   83 (94)
                      .|.+.|.-.+.++.|+-+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            4778888888888887765

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.40  E-value=0.15  Score=19.53  Aligned_cols=30  Identities=10%  Similarity=-0.055  Sum_probs=18.4

Q ss_pred             eecCCCCccccchhccCCCCCCccccccchhhc
Q psy12011          9 HFCGLFPESFLTWSNLKPNLNGMFACDLCDKEY   41 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~~   41 (94)
                      .+|+.||+.|....+   .-...-.|..||..+
T Consensus         3 r~C~~cG~~Yh~~~~---ppk~~g~CD~cg~~L   32 (38)
T d1akya2           3 LIHPASGRSYHKIFN---PPKEDMKDDVTGEAL   32 (38)
T ss_dssp             EECTTTCCEEETTTB---CCSSTTBCTTTCCBC
T ss_pred             cCCcCccchhhhhcc---CcCcCCccCCCCCEe
Confidence            578888888766553   223344677776543

>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.11  E-value=0.15  Score=19.20  Aligned_cols=30  Identities=17%  Similarity=0.233  Sum_probs=18.2

Q ss_pred             eeecCCCCccccchhccCCCCCCccccccchhh
Q psy12011          8 VHFCGLFPESFLTWSNLKPNLNGMFACDLCDKE   40 (94)
Q Consensus         8 ~~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~   40 (94)
                      .+.|+.||..|....+   .-.+.-.|+.||..
T Consensus         2 Rr~C~~CG~~Yh~~~~---pPk~~g~CD~cG~~   31 (35)
T d1zina2           2 RRICRNCGATYHLIFH---PPAKPGVCDKCGGE   31 (35)
T ss_dssp             EEEETTTCCEEETTTB---CCSSTTBCTTTCCB
T ss_pred             ccCCcCcCchhccccC---CCCCCCcCCCCCCC
Confidence            3578888887665553   23334467777643

>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus globisporus [TaxId: 1459]

Probab=87.91  E-value=0.17  Score=19.03  Aligned_cols=29  Identities=21%  Similarity=0.184  Sum_probs=17.5

Q ss_pred             eecCCCCccccchhccCCCCCCccccccchhh
Q psy12011          9 HFCGLFPESFLTWSNLKPNLNGMFACDLCDKE   40 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~   40 (94)
                      +.|+.||+.|....+   .-...-.|+.|+..
T Consensus         3 ~~C~~CG~~Yh~~~~---pPk~~g~CD~cg~~   31 (35)
T d1s3ga2           3 RICKVCGTSYHLLFN---PPQVEGKCDKDGGE   31 (35)
T ss_dssp             EEETTTCCEEETTTB---CCSBTTBCTTTCCB
T ss_pred             cCCcCcCchhccccC---CCCCCCccCCCCCC
Confidence            578888887765543   23334467777643

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.50  E-value=0.27  Score=17.14  Aligned_cols=19  Identities=21%  Similarity=0.354  Sum_probs=14.8

Q ss_pred             CCCCcccccchhHHHHHHH
Q psy12011         63 CPQCSYRTKRKGNLKSHLA   81 (94)
Q Consensus        63 c~~c~~~f~~~~~l~~h~~   81 (94)
                      .+.||+.|++..-|.-|++
T Consensus         5 f~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           5 FPGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             STTTCCEESSHHHHHHHHH
T ss_pred             CCCchhhhccHHHHHhHHH
Confidence            3578999999888877765

>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Escherichia coli [TaxId: 562]

Probab=86.28  E-value=0.3  Score=18.29  Aligned_cols=29  Identities=10%  Similarity=-0.138  Sum_probs=18.0

Q ss_pred             eecCCCCccccchhccCCCCCCccccccchhh
Q psy12011          9 HFCGLFPESFLTWSNLKPNLNGMFACDLCDKE   40 (94)
Q Consensus         9 ~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~~   40 (94)
                      .+|+.||+.|....+   .-.+.-.|+.||..
T Consensus         3 r~c~~cG~~Yh~~~~---PPk~~g~CD~cg~~   31 (35)
T d1e4va2           3 RVHAPSGRVYHVKFN---PPKVEGKDDVTGEE   31 (35)
T ss_dssp             EEETTTTEEEETTTB---CCSSTTBCTTTCCB
T ss_pred             cCCcCcCChhhhccC---ccccCCcccCCCCE
Confidence            578888887666553   23334467777654

>d2j9ub1 g.41.11.1 (B:115-161) Vacuolar protein-sorting-associated protein 36, VPS36 {Saccharomyces cerevisiae [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Ran binding protein zinc finger-like
family: Ran binding protein zinc finger-like
domain: Vacuolar protein-sorting-associated protein 36, VPS36
species: Saccharomyces cerevisiae [TaxId: 4932]

Probab=84.86  E-value=0.41  Score=18.94  Aligned_cols=32  Identities=16%  Similarity=0.122  Sum_probs=21.0

Q ss_pred             eeecCCCCccccchhccCCCCCCccccccchh
Q psy12011          8 VHFCGLFPESFLTWSNLKPNLNGMFACDLCDK   39 (94)
Q Consensus         8 ~~~c~~c~~~~~~~~~l~~~~~k~~~c~~c~~   39 (94)
                      .|.|+.|...-.....+...+.-...|..||-
T Consensus         3 ~W~CPICm~~Ne~~~e~~~n~~~~p~C~nCGV   34 (47)
T d2j9ub1           3 TWVCPICMVSNETQGEFTKDTLPTPICINCGV   34 (47)
T ss_dssp             EEECTTTCCEEEESSCCCTTCSSCCBCTTTCC
T ss_pred             ceecceeeeeccceeeeccCCCCCCcccccCC
Confidence            58899998766665655544444556777763

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.95  E-value=0.16  Score=18.98  Aligned_cols=21  Identities=19%  Similarity=0.558  Sum_probs=12.1

Q ss_pred             cccccchhhccChHHHHcchh
Q psy12011         32 FACDLCDKEYKYKRNLYSHKK   52 (94)
Q Consensus        32 ~~c~~c~~~~~~~~~l~~h~~   52 (94)
                      ..|-+|-+.|...-.+.+|+-
T Consensus         4 ltclecmrtfkssfsiwrhqv   24 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQV   24 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHhhh
Confidence            345666666666655555553

>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=83.75  E-value=0.069  Score=21.26  Aligned_cols=9  Identities=11%  Similarity=-0.119  Sum_probs=4.3

Q ss_pred             eeecCCCCc
Q psy12011          8 VHFCGLFPE   16 (94)
Q Consensus         8 ~~~c~~c~~   16 (94)
                      .|+|..||-
T Consensus         8 ~W~C~~CGy   16 (44)
T d1lkoa2           8 KWRCRNCGY   16 (44)
T ss_dssp             EEEETTTCC
T ss_pred             EEEcCCCCc
Confidence            345555543

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.81  E-value=0.53  Score=22.23  Aligned_cols=11  Identities=18%  Similarity=0.476  Sum_probs=6.5

Q ss_pred             ccccccchhhc
Q psy12011         31 MFACDLCDKEY   41 (94)
Q Consensus        31 ~~~c~~c~~~~   41 (94)
                      |-+|..||..|
T Consensus        67 Pp~CrkCGfvF   77 (105)
T d2gmga1          67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             ChhhhhcCCee
Confidence            44566666555