Psyllid ID: psy12014

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------
Protein Sequence
MFTTPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKIY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEcccccccEEEEccHHHHHEEHccccccccccccccHHHHcHHHHHHHHHHHcHHHccccc
Coil and Loop (DISEMBL)
MFTTPKLIDSlykggglfscsdcsrvykkkasltrhqtyecgqqpkyrcplcsyrakqkIHLTTHMAIRHHKKLGKIY
Flexible Loop (DISEMBL)
mfttpklidslykggglfscsDCSRVYKKKASltrhqtyecgqqpkyrcPLCSYRAKQKIHLTTHMAirhhkklgkiy
Low Complexity Region (SEG)
MFTTPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKIY
Disordered region (IsUnstruct)
******LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH********
Disordered Region (DISOPRED)
*******************CSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHM*IR*********
Disordered Region (DISEMBL)
MFTTPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKIY
Disordered Region (DISPRO)
*****KLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFTTPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKIY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	78	2.2.26 [Sep-21-2011]
Q7KQZ4	787	Longitudinals lacking pro	yes	N/A	0.769	0.076	0.5	3e-14
P42283	891	Longitudinals lacking pro	no	N/A	0.807	0.070	0.353	2e-08
Q867Z4	970	Longitudinals lacking pro	no	N/A	0.717	0.057	0.403	1e-07
G5EBU4	596	Zinc finger E-box-binding	yes	N/A	0.730	0.095	0.431	2e-07
Q9V5M3	878	Longitudinals lacking pro	no	N/A	0.512	0.045	0.45	8e-07
Q505G8	1078	Zinc finger protein 827 O	yes	N/A	0.833	0.060	0.318	4e-05
Q9BE73	1081	Zinc finger protein 827 O	N/A	N/A	0.833	0.060	0.318	5e-05
Q17R98	1081	Zinc finger protein 827 O	yes	N/A	0.833	0.060	0.318	5e-05
Q2EI21	1501	RE1-silencing transcripti	N/A	N/A	0.628	0.032	0.4	6e-05
Q24732	598	Protein glass OS=Drosophi	N/A	N/A	0.615	0.080	0.408	7e-05

>sp|Q7KQZ4|LOLA3_DROME Longitudinals lacking protein, isoforms A/B/D/L OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/60 (50%), Positives = 40/60 (66%)

Query: 15  GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL 74
           G    C  C RVYK K+SL  HQ +ECG++P+++CP C YRAKQK+H+  HM   H +K 
Sbjct: 682 GAGHPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKF 741

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.
Drosophila melanogaster (taxid: 7227)

>sp|P42283|LOLA1_DROME Longitudinals lacking protein, isoform G OS=Drosophila melanogaster GN=lola PE=1 SV=2

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 2/65 (3%)

Query: 14  GGGLFSCSDCSRVYKKKASLTRHQTYECG-QQPKYRCPLCSYRAKQKIHLTTHMAIRHHK 72
           G  ++ C  C + Y+ K++L RH+  ECG ++P ++CP C Y++KQ+ +L  H+  +HH 
Sbjct: 787 GEPVYECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGVHVR-KHHT 845

Query: 73  KLGKI 77
            L ++
Sbjct: 846 DLPQL 850

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)

Query: 18  FSCSDCSRVYKKKASLTRHQTYECG-QQPKYRCPLCSYRAKQKIHLTTHMAIRHHKK 73
           + C  C + Y+ K++L RH+  ECG ++P + CP CSY+AKQ+ +L  H+   H +K
Sbjct: 903 YVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHVRKHHPEK 959

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|G5EBU4|ZAG1_CAEEL Zinc finger E-box-binding homebox protein zag-1 OS=Caenorhabditis elegans GN=zag-1 PE=2 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 16  GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKK 73
           GLFSC  C +V+ K++SL RH+    GQ+P Y+C +C    K K HLT H  +   +K
Sbjct: 479 GLFSCDQCDKVFGKQSSLARHKYEHSGQRP-YKCDICEKAFKHKHHLTEHKRLHSGEK 535

Down-regulates expression of genes involved in either the synthesis or reuptake of serotonin, dopamine and GABA. Acts as a transcriptional repressor to regulate multiple, discrete, neuron-specific aspects of terminal differentiation, including cell migration, axonal development and gene expression. Required for axon guidance. Involved in the proper development of the pharynx. Directly represses its own transcription by interacting with conserved E-box sequence motifs 5'-CACCTG-3' in its own promoter.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9V5M3|LOLA6_DROME Longitudinals lacking protein, isoforms N/O/W/X/Y OS=Drosophila melanogaster GN=lola PE=1 SV=3

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 27/40 (67%)

Query: 18  FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAK 57
           ++C+ C + YK K SL RH+ YECG +P  +CP C ++ K
Sbjct: 709 YACNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCK 748

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q505G8|ZN827_MOUSE Zinc finger protein 827 OS=Mus musculus GN=Znf827 PE=2 SV=2

 Score = 46.6 bits (109), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 13  KGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHK 72
           + G  F C  C  V K+K+   RH     G +  ++CPLC +R  +K +L +HM +  H+
Sbjct: 366 ESGKPFQCPICGLVIKRKSYWKRHMVIHTGLK-SHQCPLCPFRCARKDNLKSHMKVHQHQ 424

Query: 73  KLGKIY 78
             G+ +
Sbjct: 425 DRGETF 430

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q9BE73|ZN827_MACFA Zinc finger protein 827 OS=Macaca fascicularis GN=ZNF827 PE=2 SV=1

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 13  KGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHK 72
           + G  F C  C  V K+K+   RH     G +  ++CPLC +R  +K +L +HM +  H+
Sbjct: 369 ESGKPFQCPICGLVIKRKSYWKRHMVIHTGLK-SHQCPLCPFRCARKDNLKSHMKVHQHQ 427

Query: 73  KLGKIY 78
             G+ +
Sbjct: 428 DRGETF 433

May be involved in transcriptional regulation.

Macaca fascicularis (taxid: 9541)

>sp|Q17R98|ZN827_HUMAN Zinc finger protein 827 OS=Homo sapiens GN=ZNF827 PE=2 SV=1

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 13  KGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHK 72
           + G  F C  C  V K+K+   RH     G +  ++CPLC +R  +K +L +HM +  H+
Sbjct: 369 ESGKPFQCPICGLVIKRKSYWKRHMVIHTGLK-SHQCPLCPFRCARKDNLKSHMKVHQHQ 427

Query: 73  KLGKIY 78
             G+ +
Sbjct: 428 DRGETF 433

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q2EI21|RESTA_XENLA RE1-silencing transcription factor A OS=Xenopus laevis GN=rest-a PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 17  LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHM 66
           L++CS CS    +K +  +H     G++P Y+C +C Y + QK HLT HM
Sbjct: 273 LYTCSQCSYFSDRKNNYIQHIRTHTGERP-YQCIICLYSSSQKTHLTRHM 321

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells (By similarity). Plays a role in the early development of the nervous system and is required for proper patterning of the neuroectoderm during gastrulation. This involves the correct speciation of the neuroepithelial domain and adequate development of the non-neural ectoderm.

Xenopus laevis (taxid: 8355)

>sp|Q24732|GLAS_DROVI Protein glass OS=Drosophila virilis GN=gl PE=3 SV=1

 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 18  FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHM 66
           + C DC++ + + A+LT H     GQ+P +RCP+C  R  Q   +TTHM
Sbjct: 455 YRCPDCNKSFSQAANLTAHVRTHTGQKP-FRCPICDRRFSQSSSVTTHM 502

Transcription factor required for gene expression specific to photoreceptor cells.

Drosophila virilis (taxid: 7244)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
157121098	731	lola [Aedes aegypti] gi|108874717|gb|EAT	0.807	0.086	0.507	7e-15
158292853	634	AGAP005245-PG [Anopheles gambiae str. PE	0.769	0.094	0.5	5e-13
255522799	468	longitudinals lacking isoform 3 [Triboli	0.910	0.151	0.444	9e-13
24652482	787	longitudinals lacking, isoform C [Drosop	0.769	0.076	0.5	1e-12
29539411	786	Lola protein isoform L [Drosophila melan	0.769	0.076	0.5	1e-12
170059859	684	lola [Culex quinquefasciatus] gi|1678784	0.833	0.095	0.5	1e-12
195425439	359	GK10676 [Drosophila willistoni] gi|19415	0.833	0.181	0.492	2e-12
194757982	337	GF11097 [Drosophila ananassae] gi|190622	0.705	0.163	0.527	4e-12
195582220	335	GD25971 [Drosophila simulans] gi|1941929	0.769	0.179	0.5	4e-12
195333169	335	GM20512 [Drosophila sechellia] gi|194125	0.769	0.179	0.5	4e-12

>gi|157121098|ref|XP_001659824.1| lola [Aedes aegypti] gi|108874717|gb|EAT38942.1| AAEL009212-PC [Aedes aegypti]

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/63 (50%), Positives = 45/63 (71%)

Query: 15  GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL 74
            G F+C DC RVYK K+SL  HQ +ECG++P+++CP C YRAKQK+H+  HM   H ++ 
Sbjct: 647 AGGFACPDCGRVYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHKERF 706

Query: 75  GKI 77
            K+
Sbjct: 707 FKL 709

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158292853|ref|XP_314150.4| AGAP005245-PG [Anopheles gambiae str. PEST] gi|157017188|gb|EAA09485.4| AGAP005245-PG [Anopheles gambiae str. PEST]

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/60 (50%), Positives = 43/60 (71%)

Query: 18  FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI 77
           F+C DC R YK K+SL  HQ +ECG++P+++CP C YRAKQK+H+  HM   H ++  K+
Sbjct: 553 FACPDCGRTYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHKERYFKM 612

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|255522799|ref|NP_001157312.1| longitudinals lacking isoform 3 [Tribolium castaneum]

 Score = 77.8 bits (190), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 1/72 (1%)

Query: 3   TTPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHL 62
           ++PK  +     G  F CS C R+YK K+SL  HQ +ECG++P+++CP C Y+AKQK+H+
Sbjct: 379 SSPKSRNRTSLDGTGFDCSVCGRIYKLKSSLRNHQKWECGKEPQFKCPYCVYKAKQKMHM 438

Query: 63  TTHMAIRHHKKL 74
             HM  R H+++
Sbjct: 439 ARHME-RMHREV 449

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24652482|ref|NP_724946.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|78711864|ref|NP_724949.2| longitudinals lacking, isoform B [Drosophila melanogaster] gi|73920870|sp|Q7KQZ4.1|LOLA3_DROME RecName: Full=Longitudinals lacking protein, isoforms A/B/D/L gi|7303724|gb|AAF58773.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|71911713|gb|AAF58776.3| longitudinals lacking, isoform B [Drosophila melanogaster]

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/60 (50%), Positives = 40/60 (66%)

Query: 15  GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL 74
           G    C  C RVYK K+SL  HQ +ECG++P+++CP C YRAKQK+H+  HM   H +K 
Sbjct: 682 GAGHPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKF 741

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|29539411|dbj|BAC67588.1| Lola protein isoform L [Drosophila melanogaster] gi|29539451|dbj|BAC67608.1| Lola protein isoform L [Drosophila melanogaster] gi|29539491|dbj|BAC67628.1| Lola protein isoform L [Drosophila melanogaster] gi|29539531|dbj|BAC67648.1| Lola protein isoform L [Drosophila melanogaster]

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/60 (50%), Positives = 40/60 (66%)

Query: 15  GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL 74
           G    C  C RVYK K+SL  HQ +ECG++P+++CP C YRAKQK+H+  HM   H +K 
Sbjct: 681 GAGHPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKF 740

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170059859|ref|XP_001865545.1| lola [Culex quinquefasciatus] gi|167878490|gb|EDS41873.1| lola [Culex quinquefasciatus]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 13  KGGGL-FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH 71
            G G+ F+C DC RVYK K+SL  HQ +ECG++P+++CP C YRAKQK+H+  HM   H 
Sbjct: 317 NGSGMGFACPDCGRVYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHK 376

Query: 72  KKLGKI 77
           ++  K+
Sbjct: 377 ERFFKV 382

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195425439|ref|XP_002061014.1| GK10676 [Drosophila willistoni] gi|194157099|gb|EDW72000.1| GK10676 [Drosophila willistoni]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 42/65 (64%)

Query: 10  SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIR 69
           SL   G    C  C RVYK K+SL  HQ +ECG++P+++CP C YRAKQK+H+  HM   
Sbjct: 246 SLIDNGAGHPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERM 305

Query: 70  HHKKL 74
           H +K 
Sbjct: 306 HKEKF 310

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194757982|ref|XP_001961241.1| GF11097 [Drosophila ananassae] gi|190622539|gb|EDV38063.1| GF11097 [Drosophila ananassae]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/55 (52%), Positives = 39/55 (70%)

Query: 20  CSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL 74
           C  C RVYK K+SL  HQ +ECG++P+++CP C YRAKQK+H+  HM   H +K 
Sbjct: 227 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKF 281

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195582220|ref|XP_002080926.1| GD25971 [Drosophila simulans] gi|194192935|gb|EDX06511.1| GD25971 [Drosophila simulans]

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/60 (50%), Positives = 40/60 (66%)

Query: 15  GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL 74
           G    C  C RVYK K+SL  HQ +ECG++P+++CP C YRAKQK+H+  HM   H +K 
Sbjct: 230 GAGHPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKF 289

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195333169|ref|XP_002033264.1| GM20512 [Drosophila sechellia] gi|194125234|gb|EDW47277.1| GM20512 [Drosophila sechellia]

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/60 (50%), Positives = 40/60 (66%)

Query: 15  GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL 74
           G    C  C RVYK K+SL  HQ +ECG++P+++CP C YRAKQK+H+  HM   H +K 
Sbjct: 230 GAGHPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHKEKF 289

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
WB|WBGene00006970	596	zag-1 [Caenorhabditis elegans	0.730	0.095	0.431	3.5e-08
FB|FBgn0005630	970	lola "longitudinals lacking" [	0.679	0.054	0.418	1.1e-07
UNIPROTKB|H9L0S9	527	H9L0S9 "Uncharacterized protei	0.756	0.111	0.370	3.5e-07
UNIPROTKB|H9L337	548	H9L337 "Uncharacterized protei	0.756	0.107	0.370	4.7e-07
UNIPROTKB|H9L2F8	733	H9L2F8 "Uncharacterized protei	0.756	0.080	0.370	5.5e-07
UNIPROTKB|J9P9E8	577	ZNF354C "Uncharacterized prote	0.833	0.112	0.348	8.2e-07
UNIPROTKB|K7EP55	215	ZNF253 "Zinc finger protein 25	0.910	0.330	0.319	8.5e-07
UNIPROTKB|I3LQV9	585	ZNF467 "Uncharacterized protei	0.679	0.090	0.444	8.6e-07
UNIPROTKB|E1B706	591	ZNF467 "Uncharacterized protei	0.679	0.089	0.444	8.7e-07
MGI|MGI:1916160	594	Zfp467 "zinc finger protein 46	0.679	0.089	0.444	8.7e-07

WB|WBGene00006970 zag-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 136 (52.9 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query:    16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKK 73
             GLFSC  C +V+ K++SL RH+    GQ+P Y+C +C    K K HLT H  +   +K
Sbjct:   479 GLFSCDQCDKVFGKQSSLARHKYEHSGQRP-YKCDICEKAFKHKHHLTEHKRLHSGEK 535

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0045773 "positive regulation of axon extension" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

FB|FBgn0005630 lola "longitudinals lacking" [Drosophila melanogaster (taxid:7227)]

 Score = 134 (52.2 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query:    18 FSCSDCSRVYKKKASLTRHQTYECG-QQPKYRCPLCSYRAKQKIHLTTHMAIRHH 71
             + C  C + Y+ K++L RH+  ECG ++P + CP CSY+AKQ+ +L  H+  +HH
Sbjct:   903 YVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHVR-KHH 956

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0007411 "axon guidance" evidence=IGI;NAS;IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0007409 "axonogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS

GO:0016199 "axon midline choice point recognition" evidence=IGI;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0019730 "antimicrobial humoral response" evidence=IMP

GO:0045476 "nurse cell apoptotic process" evidence=IMP

GO:0045467 "R7 cell development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0007464 "R3/R4 cell fate commitment" evidence=IMP

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|H9L0S9 H9L0S9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 126 (49.4 bits), Expect = 3.5e-07, P = 3.5e-07
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query:    11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH 70
             ++ G   F C +C + +K+ ++L RHQ    GQ+P ++CP C+   K++ HL TH   R+
Sbjct:   379 IHTGERPFQCPECGKSFKRSSALKRHQRIHIGQRP-FQCPDCAKSFKRRSHLNTHK--RN 435

Query:    71 HK 72
             HK
Sbjct:   436 HK 437

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H9L337 H9L337 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 125 (49.1 bits), Expect = 4.7e-07, P = 4.7e-07
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query:    11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH 70
             ++ G   F C +C + +K  ++L RHQ    GQ+P ++CP C+   K++ HL TH   R+
Sbjct:   407 IHTGERPFQCPECGKSFKSSSALKRHQRIHTGQRP-FQCPECAKSFKRRSHLNTHK--RN 463

Query:    71 HK 72
             HK
Sbjct:   464 HK 465

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H9L2F8 H9L2F8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 126 (49.4 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query:    11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH 70
             ++ G   F C +C + +K+ ++L RHQ    GQ+P ++CP C+   K++ HL TH   R+
Sbjct:   529 IHTGERPFQCPECGKSFKRSSALKRHQLIHIGQRP-FQCPDCAKSFKRRSHLNTHK--RN 585

Query:    71 HK 72
             HK
Sbjct:   586 HK 587

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9P9E8 ZNF354C "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 109 (43.4 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
 Identities = 23/66 (34%), Positives = 35/66 (53%)

Query:    11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH 70
             ++ G  L+SC +C + +  K++L RHQ    G++P Y+C  C     Q   LT H  I  
Sbjct:   456 IHTGEKLYSCEECGKAFGCKSNLYRHQRIHTGEKP-YQCNQCGKAFSQYSFLTEHERIHT 514

Query:    71 HKKLGK 76
              +KL K
Sbjct:   515 GEKLYK 520

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|K7EP55 ZNF253 "Zinc finger protein 253" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 8.5e-07, P = 8.5e-07
 Identities = 23/72 (31%), Positives = 36/72 (50%)

Query:     2 FTTPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIH 61
             F+      + + G  LF C  C + +K+ ++LT H+    G++P YRC  C     Q  +
Sbjct:    92 FSNSNTYKTRHTGINLFKCIICGKAFKRSSTLTTHKKIHTGEKP-YRCEECGKAFNQSAN 150

Query:    62 LTTHMAIRHHKK 73
             LTTH  I   +K
Sbjct:   151 LTTHKRIHTGEK 162

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|I3LQV9 ZNF467 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 123 (48.4 bits), Expect = 8.6e-07, P = 8.6e-07
 Identities = 24/54 (44%), Positives = 32/54 (59%)

Query:    12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTH 65
             ++G   F CS+C + + KKA LTRH     G++P Y C  C  R  QKIHL +H
Sbjct:   212 HRGERPFPCSECDKRFSKKAHLTRHLRTHTGERP-YPCAECGKRFSQKIHLGSH 264

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E1B706 ZNF467 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 123 (48.4 bits), Expect = 8.7e-07, P = 8.7e-07
 Identities = 24/54 (44%), Positives = 32/54 (59%)

Query:    12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTH 65
             ++G   F CS+C + + KKA LTRH     G++P Y C  C  R  QKIHL +H
Sbjct:   214 HRGERPFPCSECDKRFSKKAHLTRHLRTHTGERP-YPCAECGKRFSQKIHLGSH 266

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1916160 Zfp467 "zinc finger protein 467" [Mus musculus (taxid:10090)]

 Score = 123 (48.4 bits), Expect = 8.7e-07, P = 8.7e-07
 Identities = 24/54 (44%), Positives = 32/54 (59%)

Query:    12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTH 65
             ++G   F CS+C + + KKA LTRH     G++P Y C  C  R  QKIHL +H
Sbjct:   210 HRGERPFPCSECDKRFSKKAHLTRHLRTHTGERP-YPCAECGKRFSQKIHLGSH 262

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	78
KOG2462|consensus	279		99.86
KOG2462|consensus	279		99.81
KOG3623|consensus	1007		99.7
KOG3576|consensus	267		99.6
KOG3623|consensus	1007		99.56
KOG1074|consensus	958		99.39
PHA02768	55	hypothetical protein; Provisional	99.33
KOG3576|consensus	267		99.3
KOG1074|consensus	958		99.19
PHA00733	128	hypothetical protein	99.18
PHA00616	44	hypothetical protein	99.13
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.04
PHA02768	55	hypothetical protein; Provisional	98.86
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.85
PHA00732	79	hypothetical protein	98.84
KOG3608|consensus	467		98.8
KOG3608|consensus	467		98.78
PHA00616	44	hypothetical protein	98.69
PHA00733	128	hypothetical protein	98.61
KOG3993|consensus	500		98.57
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.53
PLN03086	567	PRLI-interacting factor K; Provisional	98.5
PLN03086	567	PRLI-interacting factor K; Provisional	98.48
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.39
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.38
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.25
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	98.18
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.15
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.12
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.98
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.91
smart00355	26	ZnF_C2H2 zinc finger.	97.8
smart00355	26	ZnF_C2H2 zinc finger.	97.68
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.59
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.57
PHA00732	79	hypothetical protein	97.5
PRK04860	160	hypothetical protein; Provisional	97.44
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.41
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.39
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.32
KOG3993|consensus	500		97.32
PRK04860	160	hypothetical protein; Provisional	96.84
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.66
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.44
KOG2893|consensus	341		96.34
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	96.09
COG5048	467	FOG: Zn-finger [General function prediction only]	96.07
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	94.95
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.81
KOG2186|consensus	276		94.18
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	93.59
COG4049	65	Uncharacterized protein containing archaeal-type C	93.24
COG1592	166	Rubrerythrin [Energy production and conversion]	92.61
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	91.96
KOG1146|consensus	1406		91.66
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	90.09
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	89.62
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	88.79
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	88.63
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	88.49
COG3357	97	Predicted transcriptional regulator containing an	88.08
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	87.61
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	87.59
COG5189	423	SFP1 Putative transcriptional repressor regulating	87.06
KOG4167|consensus	907		86.79
PRK06266	178	transcription initiation factor E subunit alpha; V	86.42
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	86.2
KOG3408|consensus	129		85.92
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	85.71
COG4957	148	Predicted transcriptional regulator [Transcription	85.71
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	85.24
PF13451	49	zf-trcl: Probable zinc-binding domain	84.88
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	84.56
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	84.22
KOG4167|consensus	907		83.9
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	83.69
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	83.41
smart00531	147	TFIIE Transcription initiation factor IIE.	83.3
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	82.39
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	81.63
KOG2593|consensus	436		81.35
PF13878	41	zf-C2H2_3: zinc-finger of acetyl-transferase ESCO	80.21

>KOG2462|consensus

Probab=99.86  E-value=5.5e-22  Score=103.63  Aligned_cols=70  Identities=19%  Similarity=0.340  Sum_probs=59.6

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +.+.+-+..-++.|.+||+.|...=.|+.|++.|+| +|||.|..|+++|...++|..|++||.+.|.|+|
T Consensus       177 LkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTHTG-EKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC  246 (279)
T KOG2462|consen  177 LKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTHTG-EKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQC  246 (279)
T ss_pred             HhhHhhccCCCcccccccccccchHHhhcccccccC-CCCccCCcccchhcchHHHHHHHHhhcCCccccC
Confidence            333444444788999999999988889999999999 8899999999999999999999999999999887

>KOG2462|consensus

Probab=99.81  E-value=1.7e-20  Score=98.13  Aligned_cols=63  Identities=22%  Similarity=0.371  Sum_probs=58.7

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhh
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAI   68 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~   68 (78)
                      ++.+.|+|||||||.|..|+++|..+++|..|+.+|.+ .++|+|..|+++|...+.|+.|...
T Consensus       203 LQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~-~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  203 LQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSD-VKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hhcccccccCCCCccCCcccchhcchHHHHHHHHhhcC-CccccCcchhhHHHHHHHHHHhhhh
Confidence            45667999999999999999999999999999999999 8889999999999999999999653

>KOG3623|consensus

Probab=99.70  E-value=6.3e-18  Score=97.99  Aligned_cols=64  Identities=31%  Similarity=0.658  Sum_probs=59.6

Q ss_pred             cCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         13 KGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        13 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +.+..|.|+.|+++|...+.|.+|...|+| ++||+|.+|.++|...-.|..|.|+|+|||||.|
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsG-qRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQC  953 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSG-QRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQC  953 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcC-CCCcccchhhHhhhhhhhhhhhhhhccCCCcchh
Confidence            446789999999999999999999999999 8899999999999999999999999999999987

>KOG3576|consensus

Probab=99.60  E-value=1.9e-16  Score=80.53  Aligned_cols=67  Identities=16%  Similarity=0.309  Sum_probs=60.1

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ....+...|.|.+|++.|.....|.+|+..|.. .+.+-|..||+.|...-.|..|.++|+|.+||||
T Consensus       110 gsssd~d~ftCrvCgK~F~lQRmlnrh~kch~~-vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc  176 (267)
T KOG3576|consen  110 GSSSDQDSFTCRVCGKKFGLQRMLNRHLKCHSD-VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKC  176 (267)
T ss_pred             cCCCCCCeeeeehhhhhhhHHHHHHHHhhhccH-HHHHHHhhccCcccchhhhhhhhccccCccccch
Confidence            334556779999999999999999999999998 7778999999999999999999999999999998

>KOG3623|consensus

Probab=99.56  E-value=1.4e-15  Score=88.55  Aligned_cols=62  Identities=23%  Similarity=0.434  Sum_probs=56.5

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHh
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMA   67 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~   67 (78)
                      +.+|.=-|+|.+||.|.+|.++|..+..|..|++.|.| +|||+|..|++.|+.+.++..|+.
T Consensus       910 LaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSG-EKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  910 LARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSG-EKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             HHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccC-CCcchhhhhhhhcccccchHhhhc
Confidence            34455569999999999999999999999999999999 999999999999999999988875

>KOG1074|consensus

Probab=99.39  E-value=3.6e-14  Score=83.56  Aligned_cols=68  Identities=22%  Similarity=0.532  Sum_probs=55.2

Q ss_pred             CchhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCC----cccC---CCcccccChhHHHHHHhhhhc
Q psy12014          3 TTPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPK----YRCP---LCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus         3 ~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~----~~c~---~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +.++.|.++|+||+||+|++|+++|..+.+|+.|+.+|.. ..|    +.|+   +|-+.|...-.|..|+++|.|
T Consensus       619 saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka-~p~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~~  693 (958)
T KOG1074|consen  619 SALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKA-KPPARVQFSCPSTFICQKKFTNAVTLPQHIRIHLG  693 (958)
T ss_pred             hhhhhhhhcccCcCccccccccchhccccchhhccccccc-CccccccccCCchhhhcccccccccccceEEeecC
Confidence            3567788889999999999999999999999999888876 433    5677   787888888888888888874

>PHA02768 hypothetical protein; Provisional

Probab=99.33  E-value=8.4e-13  Score=54.61  Aligned_cols=44  Identities=16%  Similarity=0.329  Sum_probs=38.9

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHH
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLT   63 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~   63 (78)
                      -|.|+.||+.|...+.|..|++.|+   ++++|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~---k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN---TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC---CcccCCcccceecccceeE
Confidence            3789999999999999999999998   3689999999999777654

>KOG3576|consensus

Probab=99.30  E-value=3.9e-13  Score=68.67  Aligned_cols=65  Identities=22%  Similarity=0.373  Sum_probs=56.2

Q ss_pred             hhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014          6 KLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus         6 ~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      ..+..-|...+.+.|.-||+.|-..-+|.+|++.|++ .+||+|..|+++|.+..+|..|.+.-+|
T Consensus       134 nrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtg-vrpykc~~c~kaftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  134 NRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTG-VRPYKCSLCEKAFTQRCSLESHLKKVHG  198 (267)
T ss_pred             HHHhhhccHHHHHHHhhccCcccchhhhhhhhccccC-ccccchhhhhHHHHhhccHHHHHHHHcC
Confidence            3445557777889999999999999999999999999 9999999999999999999999876554

>KOG1074|consensus

Probab=99.19  E-value=3.9e-12  Score=75.30  Aligned_cols=57  Identities=23%  Similarity=0.482  Sum_probs=52.7

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      +++|..|.+.|.+.+.|+.|.+.|++ ++||+|.+||..|....+|..|.+.|....|
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTG-ERPfqCnvCG~~FSTkGNLKvH~~rH~e~~p  409 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTG-ERPFQCNVCGNRFSTKGNLKVHFQRHREKYP  409 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCC-CCCeeecccccccccccceeeeeeeccccCC
Confidence            36899999999999999999999999 8899999999999999999999999876554

>PHA00733 hypothetical protein

Probab=99.18  E-value=9.7e-11  Score=56.71  Aligned_cols=57  Identities=21%  Similarity=0.426  Sum_probs=49.4

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +.+++||.|..|++.|.....|..|++.+..   ++.|..|++.|.....|..|+...++
T Consensus        68 ~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~---~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         68 SKAVSPYVCPLCLMPFSSSVSLKQHIRYTEH---SKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCCCCCccCCCCCCcCCCHHHHHHHHhcCCc---CccCCCCCCccCCHHHHHHHHHHhcC
Confidence            3458899999999999999999999987632   58999999999999999999887664

>PHA00616 hypothetical protein

Probab=99.13  E-value=3.1e-11  Score=47.83  Aligned_cols=32  Identities=19%  Similarity=0.355  Sum_probs=21.9

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++|..||+.|...+.+..|++.|+|+++++|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            46677777777777777777777777766654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.04  E-value=1.7e-10  Score=41.30  Aligned_cols=24  Identities=33%  Similarity=0.769  Sum_probs=16.2

Q ss_pred             HHHHhhcccCCCCCcccCCCccccc
Q psy12014         33 LTRHQTYECGQQPKYRCPLCSYRAK   57 (78)
Q Consensus        33 l~~h~~~h~~~~~~~~c~~c~~~f~   57 (78)
                      |..|++.|++ ++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~-~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTG-EKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSS-SSSEEESSSSEEES
T ss_pred             HHHHhhhcCC-CCCCCCCCCcCeeC
Confidence            5667777777 66677777776664

...

>PHA02768 hypothetical protein; Provisional

Probab=98.86  E-value=2e-09  Score=44.66  Aligned_cols=29  Identities=24%  Similarity=0.527  Sum_probs=25.7

Q ss_pred             cccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |+|+.||+.|...++|..|+++|+  ++++|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc   34 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKL   34 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccC
Confidence            899999999999999999999999  44444

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.85  E-value=1.2e-09  Score=39.07  Aligned_cols=24  Identities=13%  Similarity=0.347  Sum_probs=21.6

Q ss_pred             hhhhhhhccCCCceecCCchhhcC
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYK   28 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~   28 (78)
                      +..+++.|+|++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            467888999999999999999986

...

>PHA00732 hypothetical protein

Probab=98.84  E-value=4.2e-09  Score=47.05  Aligned_cols=46  Identities=22%  Similarity=0.488  Sum_probs=38.0

Q ss_pred             ceecCCchhhcCCHHHHHHHhhc-ccCCCCCcccCCCcccccChhHHHHHHhhh
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTY-ECGQQPKYRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~-h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      ||.|..|++.|.....|..|++. |.+    +.|..|++.|.   .+..|.++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~----~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL----TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC----CccCCCCCEeC---Chhhhhccc
Confidence            57899999999999999999984 654    58999999997   466776554

>KOG3608|consensus

Probab=98.80  E-value=8.2e-09  Score=56.97  Aligned_cols=31  Identities=35%  Similarity=0.636  Sum_probs=16.1

Q ss_pred             cccCCCcccccChhHHHHHHhh-hhcCccccC
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAI-RHHKKLGKI   77 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~-~~g~k~~~~   77 (78)
                      |.|+.|+.+....++|..|+++ |+..||+||
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKC  295 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKC  295 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCccc
Confidence            4555555555555555555553 344555554

>KOG3608|consensus

Probab=98.78  E-value=1e-08  Score=56.60  Aligned_cols=60  Identities=22%  Similarity=0.500  Sum_probs=43.4

Q ss_pred             CceecCCchhhcCCHHHHHHHhhc-ccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTY-ECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~-h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ..|.|..|+.+...++.|..|++. |.. .+||+|..|++.+...+.|..|..+|+ +-.|.|
T Consensus       262 n~ykCplCdmtc~~~ssL~~H~r~rHs~-dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C  322 (467)
T KOG3608|consen  262 NCYKCPLCDMTCSSASSLTTHIRYRHSK-DKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQC  322 (467)
T ss_pred             hcccccccccCCCChHHHHHHHHhhhcc-CCCccccchhhhhccHHHHHHHHHhcc-ccceec
Confidence            356777777777777777777776 444 777888888888888888888888776 444444

>PHA00616 hypothetical protein

Probab=98.69  E-value=1.4e-08  Score=40.31  Aligned_cols=34  Identities=21%  Similarity=0.457  Sum_probs=30.7

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      ||.|..||+.|.....+..|++.|++ ++++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg-~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHK-QNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcC-CCccceeE
Confidence            68999999999999999999999999 77787764

>PHA00733 hypothetical protein

Probab=98.61  E-value=2.7e-08  Score=48.26  Aligned_cols=61  Identities=13%  Similarity=0.168  Sum_probs=46.3

Q ss_pred             CCCceecCCchhhcCCHHHHHHHh----h-cccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         14 GGGLFSCSDCSRVYKKKASLTRHQ----T-YECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        14 ~~~~~~c~~c~~~f~~~~~l~~h~----~-~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ..+++.|.+|...|.....|..+.    . .+.+ .+||.|..|++.|.....|..|++.+  +.+++|
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~-~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C  102 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKA-VSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVC  102 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCC-CCCccCCCCCCcCCCHHHHHHHHhcC--CcCccC
Confidence            457788999998888777766551    1 2233 66899999999999999999999876  345655

>KOG3993|consensus

Probab=98.57  E-value=3.6e-08  Score=55.45  Aligned_cols=57  Identities=19%  Similarity=0.530  Sum_probs=47.6

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccCC-------CC-------------------------CcccCCCcccccChhHH
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECGQ-------QP-------------------------KYRCPLCSYRAKQKIHL   62 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~-------~~-------------------------~~~c~~c~~~f~~~~~l   62 (78)
                      ...|+|.+|++.|....+|..|.++|-..       .+                         -|.|..|++.|.....|
T Consensus       293 ~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYL  372 (500)
T KOG3993|consen  293 HVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYL  372 (500)
T ss_pred             EeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHH
Confidence            34799999999999999999999998321       11                         26799999999999999


Q ss_pred             HHHHhhhhc
Q psy12014         63 TTHMAIRHH   71 (78)
Q Consensus        63 ~~h~~~~~g   71 (78)
                      ..|+-+|..
T Consensus       373 rKHqlthq~  381 (500)
T KOG3993|consen  373 RKHQLTHQR  381 (500)
T ss_pred             HHhHHhhhc
Confidence            999888863

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.53  E-value=4.5e-07  Score=37.78  Aligned_cols=52  Identities=27%  Similarity=0.598  Sum_probs=39.0

Q ss_pred             ceecCCchhhcCCHHHHHHHhhc-ccCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTY-ECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~-h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      .|.|+.|++.|+ ...|..|... |..+.+.+.|++|...+.  .+|..|+..+++
T Consensus         2 ~f~CP~C~~~~~-~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKGFS-ESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCccC-HHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            588999999554 5678888654 776556789999987544  488889887764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.50  E-value=2.1e-07  Score=54.47  Aligned_cols=58  Identities=19%  Similarity=0.406  Sum_probs=31.2

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccC----------hhHHHHHHhhhhcCccccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQ----------KIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~----------~~~l~~h~~~~~g~k~~~~   77 (78)
                      +++.|. |+..+ ....|..|+..|.+ .+|+.|..|+..+..          ...|..|.... |.+++.|
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp-~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C  544 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCP-LRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPC  544 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCC-CCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEc
Confidence            455565 65433 34555566655665 555666666655531          23455565553 5555554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.48  E-value=3e-07  Score=53.87  Aligned_cols=59  Identities=17%  Similarity=0.414  Sum_probs=49.1

Q ss_pred             cCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         13 KGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        13 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ..++.+.|..|++.|. ...|..|+..+.   .|+.|+ |+..+ ....|..|+.+|.++++++|
T Consensus       449 el~~H~~C~~Cgk~f~-~s~LekH~~~~H---kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C  507 (567)
T PLN03086        449 EAKNHVHCEKCGQAFQ-QGEMEKHMKVFH---EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITC  507 (567)
T ss_pred             ccccCccCCCCCCccc-hHHHHHHHHhcC---CCccCC-CCCCc-chhHHHhhhhccCCCCceeC
Confidence            3456789999999996 567899999864   468999 99755 56899999999999999988

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.39  E-value=3e-07  Score=31.65  Aligned_cols=21  Identities=33%  Similarity=0.730  Sum_probs=10.1

Q ss_pred             ccCCCcccccChhHHHHHHhh
Q psy12014         48 RCPLCSYRAKQKIHLTTHMAI   68 (78)
Q Consensus        48 ~c~~c~~~f~~~~~l~~h~~~   68 (78)
                      .|..|++.|.....|..|++.
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHhH
Confidence            344455555555555544443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.38  E-value=2.9e-07  Score=31.70  Aligned_cols=23  Identities=26%  Similarity=0.719  Sum_probs=20.8

Q ss_pred             eecCCchhhcCCHHHHHHHhhcc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYE   40 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h   40 (78)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999998764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.25  E-value=7.5e-07  Score=31.84  Aligned_cols=23  Identities=17%  Similarity=0.333  Sum_probs=13.1

Q ss_pred             cccCCCcccccChhHHHHHHhhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      ++|..|++.|.....|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            45555555555555555555554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.18  E-value=2.7e-06  Score=34.65  Aligned_cols=32  Identities=38%  Similarity=0.722  Sum_probs=21.9

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhhcCccc
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLG   75 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~   75 (78)
                      ..|-.|++|+..+.+..+|..|+.+.++.||.
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS--
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccCC
Confidence            66788999999999999999999888888774

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.15  E-value=2.3e-06  Score=29.39  Aligned_cols=23  Identities=30%  Similarity=0.782  Sum_probs=11.9

Q ss_pred             cccCCCcccccChhHHHHHHhhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      |.|..|++.|.....|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555666666666666555544

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.12  E-value=3.2e-06  Score=30.14  Aligned_cols=25  Identities=24%  Similarity=0.814  Sum_probs=22.7

Q ss_pred             ceecCCchhhcCCHHHHHHHhhccc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYEC   41 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~   41 (78)
                      +|.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5899999999999999999998764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.98  E-value=2.5e-06  Score=46.91  Aligned_cols=53  Identities=28%  Similarity=0.577  Sum_probs=41.7

Q ss_pred             CCceecCC--chhhcCCHHHHHHHhhc-c-----------------cCCCCCcccCCCcccccChhHHHHHHh
Q psy12014         15 GGLFSCSD--CSRVYKKKASLTRHQTY-E-----------------CGQQPKYRCPLCSYRAKQKIHLTTHMA   67 (78)
Q Consensus        15 ~~~~~c~~--c~~~f~~~~~l~~h~~~-h-----------------~~~~~~~~c~~c~~~f~~~~~l~~h~~   67 (78)
                      ++||+|.+  |++.+...-.|+-|+.- |                 ..+.|||+|.+|++.+.....|.-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            59999987  99999988888777653 2                 112489999999999998888876654

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.91  E-value=1.2e-05  Score=27.54  Aligned_cols=23  Identities=26%  Similarity=0.723  Sum_probs=18.9

Q ss_pred             eecCCchhhcCCHHHHHHHhhcc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYE   40 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h   40 (78)
                      |.|+.|+..|.....|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999998764

...

>smart00355 ZnF_C2H2 zinc finger

Probab=97.80  E-value=3e-05  Score=26.85  Aligned_cols=22  Identities=41%  Similarity=0.670  Sum_probs=11.8

Q ss_pred             ccCCCcccccChhHHHHHHhhh
Q psy12014         48 RCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        48 ~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      .|..|++.|.....+..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4555555555555555555543

>smart00355 ZnF_C2H2 zinc finger

Probab=97.68  E-value=5e-05  Score=26.24  Aligned_cols=24  Identities=29%  Similarity=0.818  Sum_probs=21.0

Q ss_pred             eecCCchhhcCCHHHHHHHhhccc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYEC   41 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~   41 (78)
                      +.|..|++.|.....|..|+..|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.59  E-value=0.00011  Score=30.04  Aligned_cols=35  Identities=17%  Similarity=0.249  Sum_probs=23.5

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccCCCCC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPK   46 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~   46 (78)
                      ....+.|..|.+|+..+....+|.+|+....+ .+|
T Consensus        18 ~~~S~~PatCP~C~a~~~~srnLrRHle~~H~-~k~   52 (54)
T PF09237_consen   18 KSQSEQPATCPICGAVIRQSRNLRRHLEIRHF-KKP   52 (54)
T ss_dssp             CCTTS--EE-TTT--EESSHHHHHHHHHHHTT-TS-
T ss_pred             hhccCCCCCCCcchhhccchhhHHHHHHHHhc-ccC
Confidence            34568899999999999999999999977555 443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.57  E-value=9.1e-05  Score=34.07  Aligned_cols=24  Identities=29%  Similarity=0.742  Sum_probs=19.4

Q ss_pred             CcccCCCcccccChhHHHHHHhhh
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      .+.|..|++.|.....|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            378899999999899999998865

>PHA00732 hypothetical protein

Probab=97.50  E-value=0.00012  Score=32.86  Aligned_cols=27  Identities=19%  Similarity=0.581  Sum_probs=23.4

Q ss_pred             CcccCCCcccccChhHHHHHHhh-hhcC
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAI-RHHK   72 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~-~~g~   72 (78)
                      ||.|..|++.|.....|..|++. |.+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~   28 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLT   28 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCC
Confidence            58899999999999999999984 6653

>PRK04860 hypothetical protein; Provisional

Probab=97.44  E-value=9.6e-05  Score=37.34  Aligned_cols=37  Identities=24%  Similarity=0.609  Sum_probs=24.2

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccC
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQ   58 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~   58 (78)
                      +|.|. |+.   ....+.+|.+++++ .++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g-~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRG-EAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcC-CccEECCCCCceeEE
Confidence            46776 765   33445677777777 666777777766653

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.41  E-value=0.0002  Score=24.64  Aligned_cols=23  Identities=43%  Similarity=0.996  Sum_probs=13.4

Q ss_pred             cccCCCcccccChhHHHHHHhhhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      |+|..|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666766655 666777766654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.39  E-value=0.00016  Score=25.08  Aligned_cols=20  Identities=25%  Similarity=0.639  Sum_probs=10.2

Q ss_pred             ecCCchhhcCCHHHHHHHhh
Q psy12014         19 SCSDCSRVYKKKASLTRHQT   38 (78)
Q Consensus        19 ~c~~c~~~f~~~~~l~~h~~   38 (78)
                      .|.+|+..|.....+..|.+
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            45555555555555555543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.32  E-value=0.00019  Score=24.86  Aligned_cols=23  Identities=17%  Similarity=0.524  Sum_probs=20.5

Q ss_pred             cccCCCcccccChhHHHHHHhhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      |.|..|...|.....+..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57999999999999999998765

>KOG3993|consensus

Probab=97.32  E-value=4.7e-05  Score=43.50  Aligned_cols=53  Identities=23%  Similarity=0.459  Sum_probs=43.2

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhh
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      .|.|..|...|...-.|..|.-.-.. ...|+|+.|++.|+=..+|..|.|=|-
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV-~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIV-HVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeE-EeeecCCcccccccCchhhhhhhcccC
Confidence            48899999999888888888643333 334999999999999999999998873

>PRK04860 hypothetical protein; Provisional

Probab=96.84  E-value=0.00076  Score=34.17  Aligned_cols=28  Identities=18%  Similarity=0.502  Sum_probs=24.4

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +|.|. |+.   ...++..|.++++|+++|.|
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC  146 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRC  146 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEEC
Confidence            58897 886   67778999999999999988

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.66  E-value=0.0011  Score=23.46  Aligned_cols=21  Identities=24%  Similarity=0.518  Sum_probs=11.5

Q ss_pred             cccCCCcccccChhHHHHHHh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMA   67 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~   67 (78)
                      |-|..|++.|.....+..|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            345555555555555555544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.44  E-value=0.0042  Score=21.69  Aligned_cols=19  Identities=26%  Similarity=0.632  Sum_probs=9.9

Q ss_pred             ccCCCcccccChhHHHHHHh
Q psy12014         48 RCPLCSYRAKQKIHLTTHMA   67 (78)
Q Consensus        48 ~c~~c~~~f~~~~~l~~h~~   67 (78)
                      .|+.|++.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455666666 3444555543

>KOG2893|consensus

Probab=96.34  E-value=0.0012  Score=35.53  Aligned_cols=44  Identities=23%  Similarity=0.507  Sum_probs=33.7

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHH
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTH   65 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h   65 (78)
                      ++ .|..|++.|.....|..|+.     .+.|+|.+|-+....-..|..|
T Consensus        10 kp-wcwycnrefddekiliqhqk-----akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   10 KP-WCWYCNREFDDEKILIQHQK-----AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             Cc-eeeecccccchhhhhhhhhh-----hccceeeeehhhhccCCCceee
Confidence            44 48899999999999999988     5568999997655555555555

>smart00451 ZnF_U1 U1-like zinc finger

Probab=96.09  E-value=0.0077  Score=22.37  Aligned_cols=22  Identities=23%  Similarity=0.495  Sum_probs=15.1

Q ss_pred             ceecCCchhhcCCHHHHHHHhh
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQT   38 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~   38 (78)
                      +|.|+.|+..|.....+..|..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777776666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.07  E-value=0.0011  Score=37.52  Aligned_cols=61  Identities=21%  Similarity=0.425  Sum_probs=52.0

Q ss_pred             CceecCCchhhcCCHHHHHHHhh--cccCCC--CCcccC--CCcccccChhHHHHHHhhhhcCccccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQT--YECGQQ--PKYRCP--LCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~--~h~~~~--~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .++.|..|...|.....+..|.+  .|.+ .  +|+.|+  .|++.|.....+..|..+|++..+.++
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSG-ESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             cCCCCccccCCcccccccccccccccccc-ccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            36788889999999999999999  7988 6  889999  799999999999999999988776554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=94.95  E-value=0.034  Score=25.38  Aligned_cols=27  Identities=19%  Similarity=0.563  Sum_probs=22.7

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ..+.|..|++.|.+...|..|++.+..
T Consensus        49 ~~~~C~~C~~~f~s~~~l~~Hm~~~~H   75 (100)
T PF12756_consen   49 ESFRCPYCNKTFRSREALQEHMRSKHH   75 (100)
T ss_dssp             SSEEBSSSS-EESSHHHHHHHHHHTTT
T ss_pred             CCCCCCccCCCCcCHHHHHHHHcCccC
Confidence            369999999999999999999997544

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.81  E-value=0.019  Score=21.33  Aligned_cols=24  Identities=25%  Similarity=0.955  Sum_probs=16.5

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      |.|..||..+...             ..++.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~-------------~~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGE-------------EAPWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCC-------------cCCCcCcCCCC
Confidence            6788888665432             24688999974

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2186|consensus

Probab=94.18  E-value=0.04  Score=30.05  Aligned_cols=49  Identities=18%  Similarity=0.407  Sum_probs=36.1

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhh
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      |.|..||....-+ .+..|+..-++ .. |.|.-|+.+|.. .+...|....+
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~-fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AY-FSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-Ce-eEEeeccccccc-chhhhhhhhcc
Confidence            6799999887644 45668887666 54 899999999987 45566766544

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=93.59  E-value=0.081  Score=19.82  Aligned_cols=25  Identities=24%  Similarity=0.891  Sum_probs=16.6

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      .|.|..||..+.             +...|..|+.|+.
T Consensus         2 ~~~C~~CG~i~~-------------g~~~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHE-------------GEEAPEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeE-------------CCcCCCcCcCCCC
Confidence            478888886543             2134678999875

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.24  E-value=0.074  Score=22.28  Aligned_cols=30  Identities=20%  Similarity=0.543  Sum_probs=23.8

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhc
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTY   39 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~   39 (78)
                      +...||.-+.|+.|+..|.....+.+|...
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            345677788999999999988888888754

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=92.61  E-value=0.11  Score=26.75  Aligned_cols=24  Identities=25%  Similarity=0.775  Sum_probs=18.3

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      -|.|.+||..             +.+ ..|..|+.|+-
T Consensus       134 ~~vC~vCGy~-------------~~g-e~P~~CPiCga  157 (166)
T COG1592         134 VWVCPVCGYT-------------HEG-EAPEVCPICGA  157 (166)
T ss_pred             EEEcCCCCCc-------------ccC-CCCCcCCCCCC
Confidence            6999999854             345 66789999983

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=91.96  E-value=0.11  Score=25.77  Aligned_cols=25  Identities=20%  Similarity=0.308  Sum_probs=15.7

Q ss_pred             cccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      ..|.+||+.|...   ..|++.|+|..|
T Consensus        73 i~clecGk~~k~L---krHL~~~~gltp   97 (132)
T PF05443_consen   73 IICLECGKKFKTL---KRHLRTHHGLTP   97 (132)
T ss_dssp             EE-TBT--EESBH---HHHHHHTT-S-H
T ss_pred             eEEccCCcccchH---HHHHHHccCCCH
Confidence            5799999987754   789999987654

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>KOG1146|consensus

Probab=91.66  E-value=0.23  Score=33.14  Aligned_cols=57  Identities=21%  Similarity=0.387  Sum_probs=45.3

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhcccCC------------------------CCCcccCCCcccccChhHHHHHHh
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECGQ------------------------QPKYRCPLCSYRAKQKIHLTTHMA   67 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~------------------------~~~~~c~~c~~~f~~~~~l~~h~~   67 (78)
                      ++-.+.+.|..|+..|.....|..|++....+                        .+|+.|..|...+....+|..|++
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            44458899999999999999999999871110                        246889999999988888888877


Q ss_pred             h
Q psy12014         68 I   68 (78)
Q Consensus        68 ~   68 (78)
                      .
T Consensus       540 S  540 (1406)
T KOG1146|consen  540 S  540 (1406)
T ss_pred             H
Confidence            5

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=90.09  E-value=0.038  Score=29.43  Aligned_cols=45  Identities=20%  Similarity=0.440  Sum_probs=28.3

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcc---cCC------CCC-----cccCCCcccccCh
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYE---CGQ------QPK-----YRCPLCSYRAKQK   59 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h---~~~------~~~-----~~c~~c~~~f~~~   59 (78)
                      ++...|+.|+..|..........+.-   ...      ..|     +.|+.||.++...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            46678999999998775544443321   110      222     5799999876533

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=89.62  E-value=0.3  Score=26.21  Aligned_cols=26  Identities=15%  Similarity=0.432  Sum_probs=20.9

Q ss_pred             CCCceecCCchhhcCCHHHHHHHhhc
Q psy12014         14 GGGLFSCSDCSRVYKKKASLTRHQTY   39 (78)
Q Consensus        14 ~~~~~~c~~c~~~f~~~~~l~~h~~~   39 (78)
                      .+..|.|..|++.|.-..++..|+..
T Consensus        74 ~~~K~~C~lc~KlFkg~eFV~KHI~n   99 (214)
T PF04959_consen   74 DEDKWRCPLCGKLFKGPEFVRKHIFN   99 (214)
T ss_dssp             SSEEEEE-SSS-EESSHHHHHHHHHH
T ss_pred             cCCEECCCCCCcccCChHHHHHHHhh
Confidence            45569999999999999999999876

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=88.79  E-value=0.35  Score=19.27  Aligned_cols=27  Identities=33%  Similarity=0.883  Sum_probs=18.6

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYR   55 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~   55 (78)
                      .|.|..||..|...           . ..+.+|+.||..
T Consensus         2 ~Y~C~~Cg~~~~~~-----------~-~~~irC~~CG~r   28 (44)
T smart00659        2 IYICGECGRENEIK-----------S-KDVVRCRECGYR   28 (44)
T ss_pred             EEECCCCCCEeecC-----------C-CCceECCCCCce
Confidence            47899999877532           1 335789999853

present in RNA polymerase I, II and III

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=88.63  E-value=0.48  Score=18.00  Aligned_cols=34  Identities=24%  Similarity=0.621  Sum_probs=20.8

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccccc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAK   57 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   57 (78)
                      -.|+.|+..|......    ....+ . ..+|..|+..|.
T Consensus         3 i~CP~C~~~f~v~~~~----l~~~~-~-~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDK----LPAGG-R-KVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHHH----cccCC-c-EEECCCCCcEee
Confidence            3688888888755421    11222 3 378998887764

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=88.49  E-value=0.44  Score=18.05  Aligned_cols=33  Identities=24%  Similarity=0.549  Sum_probs=20.6

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRA   56 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f   56 (78)
                      ..|+.|+..|...+..    ....+ . ..+|..|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~----ip~~g-~-~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEK----IPPKG-R-KVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHH----CCCCC-c-EEECCCCCCEe
Confidence            4688888888765532    22222 3 37888888766

>COG3357 Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon [Transcription]

Probab=88.08  E-value=0.22  Score=23.04  Aligned_cols=13  Identities=15%  Similarity=0.536  Sum_probs=8.2

Q ss_pred             CceecCCchhhcC
Q psy12014         16 GLFSCSDCSRVYK   28 (78)
Q Consensus        16 ~~~~c~~c~~~f~   28 (78)
                      +|-.|..||..|.
T Consensus        57 ~Pa~CkkCGfef~   69 (97)
T COG3357          57 RPARCKKCGFEFR   69 (97)
T ss_pred             cChhhcccCcccc
Confidence            4556777776664

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=87.61  E-value=0.52  Score=22.59  Aligned_cols=30  Identities=20%  Similarity=0.569  Sum_probs=21.1

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccCh
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQK   59 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~   59 (78)
                      ..|..||..|=   .|        . +.|..|+.||..|...
T Consensus        10 R~Cp~CG~kFY---DL--------n-k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFY---DL--------N-KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhc---cC--------C-CCCccCCCCCCccCcc
Confidence            47888887652   12        2 5678899999887755

The function of members of this family is unknown.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=87.59  E-value=0.71  Score=23.56  Aligned_cols=36  Identities=14%  Similarity=0.427  Sum_probs=26.6

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccccc
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAK   57 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   57 (78)
                      .+...-|.|+.|+..|+...++.         . -|.|+.||....
T Consensus       104 e~~~~~Y~Cp~c~~r~tf~eA~~---------~-~F~Cp~Cg~~L~  139 (158)
T TIGR00373       104 ETNNMFFICPNMCVRFTFNEAME---------L-NFTCPRCGAMLD  139 (158)
T ss_pred             ccCCCeEECCCCCcEeeHHHHHH---------c-CCcCCCCCCEee
Confidence            44566789999999888766653         1 399999997654

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=87.06  E-value=0.13  Score=29.18  Aligned_cols=25  Identities=24%  Similarity=0.505  Sum_probs=18.9

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHH
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRH   36 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h   36 (78)
                      -...|||+|..|++.+..--.|+-|
T Consensus       393 ~~~~KPYrCevC~KRYKNlNGLKYH  417 (423)
T COG5189         393 SAKDKPYRCEVCDKRYKNLNGLKYH  417 (423)
T ss_pred             cccCCceeccccchhhccCccceec
Confidence            4567999999999998865555444

>KOG4167|consensus

Probab=86.79  E-value=0.13  Score=32.28  Aligned_cols=24  Identities=17%  Similarity=0.289  Sum_probs=22.1

Q ss_pred             cccCCCcccccChhHHHHHHhhhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      |.|..|++.|..-.+++.|+++|.
T Consensus       793 FpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  793 FPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             eehHHHHHHHHHHhhhhHHHHHHH
Confidence            789999999999999999999985

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=86.42  E-value=0.86  Score=23.77  Aligned_cols=35  Identities=20%  Similarity=0.596  Sum_probs=25.2

Q ss_pred             cCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccccc
Q psy12014         13 KGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAK   57 (78)
Q Consensus        13 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   57 (78)
                      ....-|.|+.|+..|+....+.          .-|.|+.||....
T Consensus       113 ~~~~~Y~Cp~C~~rytf~eA~~----------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        113 ENNMFFFCPNCHIRFTFDEAME----------YGFRCPQCGEMLE  147 (178)
T ss_pred             cCCCEEECCCCCcEEeHHHHhh----------cCCcCCCCCCCCe
Confidence            3456689999999888665442          1399999997554

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=86.20  E-value=0.42  Score=25.69  Aligned_cols=27  Identities=33%  Similarity=0.656  Sum_probs=21.0

Q ss_pred             cccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      |.|..|+|.|.-......|+..-|.|+
T Consensus        78 ~~C~lc~KlFkg~eFV~KHI~nKH~e~  104 (214)
T PF04959_consen   78 WRCPLCGKLFKGPEFVRKHIFNKHPEK  104 (214)
T ss_dssp             EEE-SSS-EESSHHHHHHHHHHH-HHH
T ss_pred             ECCCCCCcccCChHHHHHHHhhcCHHH
Confidence            899999999999999999988766553

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>KOG3408|consensus

Probab=85.92  E-value=0.91  Score=22.23  Aligned_cols=28  Identities=32%  Similarity=0.736  Sum_probs=22.2

Q ss_pred             cCCCceecCCchhhcCCHHHHHHHhhcc
Q psy12014         13 KGGGLFSCSDCSRVYKKKASLTRHQTYE   40 (78)
Q Consensus        13 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h   40 (78)
                      .|...|.|..|.+-|.....|..|.+.-
T Consensus        53 PG~GqfyCi~CaRyFi~~~~l~~H~ktK   80 (129)
T KOG3408|consen   53 PGGGQFYCIECARYFIDAKALKTHFKTK   80 (129)
T ss_pred             CCCceeehhhhhhhhcchHHHHHHHhcc
Confidence            3455688999999999998888887653

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=85.71  E-value=0.89  Score=21.53  Aligned_cols=25  Identities=36%  Similarity=0.817  Sum_probs=21.9

Q ss_pred             ccc----CCCcccccChhHHHHHHhhhhc
Q psy12014         47 YRC----PLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        47 ~~c----~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      |.|    ..|+........+..|.+..+|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            789    8899999999999999988765

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG4957 Predicted transcriptional regulator [Transcription]

Probab=85.71  E-value=0.5  Score=23.56  Aligned_cols=25  Identities=16%  Similarity=0.098  Sum_probs=18.6

Q ss_pred             cccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      ..|.++|+.|.   +|.+|+.+|.|..|
T Consensus        77 IicLEDGkkfK---SLKRHL~t~~gmTP  101 (148)
T COG4957          77 IICLEDGKKFK---SLKRHLTTHYGLTP  101 (148)
T ss_pred             EEEeccCcchH---HHHHHHhcccCCCH
Confidence            35777887665   67889999887654

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=85.24  E-value=1.2  Score=15.57  Aligned_cols=19  Identities=21%  Similarity=0.691  Sum_probs=11.0

Q ss_pred             ccCCCcccccChhHHHHHHh
Q psy12014         48 RCPLCSYRAKQKIHLTTHMA   67 (78)
Q Consensus        48 ~c~~c~~~f~~~~~l~~h~~   67 (78)
                      .|+.|++.+ ....++.|..
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            577777666 3345555543

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF13451 zf-trcl: Probable zinc-binding domain

Probab=84.88  E-value=0.57  Score=19.17  Aligned_cols=39  Identities=21%  Similarity=0.439  Sum_probs=20.6

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCc
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCS   53 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~   53 (78)
                      .+.+.|..||..|.-...-+..-..-.-...|-+|..|.
T Consensus         2 Dk~l~C~dCg~~FvfTa~EQ~fy~eKgf~n~p~RC~~CR   40 (49)
T PF13451_consen    2 DKTLTCKDCGAEFVFTAGEQKFYAEKGFDNEPKRCPSCR   40 (49)
T ss_pred             CeeEEcccCCCeEEEehhHHHHHHhcCCcCCCccCHHHH
Confidence            457889999997774432222211111112356777764

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=84.56  E-value=1.2  Score=18.96  Aligned_cols=33  Identities=27%  Similarity=0.638  Sum_probs=18.9

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      -.|.|..||........-  - +.  . -.+|.|+.||.
T Consensus        26 v~F~CPnCGe~~I~Rc~~--C-Rk--~-g~~Y~Cp~CGF   58 (61)
T COG2888          26 VKFPCPNCGEVEIYRCAK--C-RK--L-GNPYRCPKCGF   58 (61)
T ss_pred             eEeeCCCCCceeeehhhh--H-HH--c-CCceECCCcCc
Confidence            348888888654433211  1 11  1 34689988873

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=84.22  E-value=0.96  Score=17.02  Aligned_cols=34  Identities=24%  Similarity=0.447  Sum_probs=20.5

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccccc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAK   57 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   57 (78)
                      ..|+.|+..|......    ....+ . ...|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~----~~~~~-~-~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQ----LGANG-G-KVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHH----cCCCC-C-EEECCCCCCEEE
Confidence            4688888877654432    11112 2 368999987764

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>KOG4167|consensus

Probab=83.90  E-value=0.26  Score=31.10  Aligned_cols=25  Identities=28%  Similarity=0.563  Sum_probs=22.8

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccC
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |.|.+|++.|.....+..||..|.-
T Consensus       793 FpCreC~kvF~KiKSrNAHMK~Hr~  817 (907)
T KOG4167|consen  793 FPCRECGKVFFKIKSRNAHMKTHRQ  817 (907)
T ss_pred             eehHHHHHHHHHHhhhhHHHHHHHH
Confidence            8999999999988889999998866

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=83.69  E-value=0.57  Score=17.34  Aligned_cols=26  Identities=27%  Similarity=0.735  Sum_probs=14.3

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYR   55 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~   55 (78)
                      |.|..|+..+..          . . ..+.+|..||..
T Consensus         1 Y~C~~Cg~~~~~----------~-~-~~~irC~~CG~R   26 (32)
T PF03604_consen    1 YICGECGAEVEL----------K-P-GDPIRCPECGHR   26 (32)
T ss_dssp             EBESSSSSSE-B----------S-T-SSTSSBSSSS-S
T ss_pred             CCCCcCCCeeEc----------C-C-CCcEECCcCCCe
Confidence            457777765531          1 1 234788888853

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=83.41  E-value=1.2  Score=17.63  Aligned_cols=30  Identities=30%  Similarity=0.734  Sum_probs=18.8

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccccc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAK   57 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   57 (78)
                      .|.|..||..+....          . .....|+.||..+.
T Consensus         3 ~y~C~~CG~~~~~~~----------~-~~~~~Cp~CG~~~~   32 (46)
T PRK00398          3 EYKCARCGREVELDE----------Y-GTGVRCPYCGYRIL   32 (46)
T ss_pred             EEECCCCCCEEEECC----------C-CCceECCCCCCeEE
Confidence            578888887664311          1 11478999986443

>smart00531 TFIIE Transcription initiation factor IIE

Probab=83.30  E-value=1.6  Score=21.95  Aligned_cols=40  Identities=15%  Similarity=0.512  Sum_probs=26.1

Q ss_pred             cCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccccc
Q psy12014         13 KGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAK   57 (78)
Q Consensus        13 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   57 (78)
                      .+..-|.|+.|+..|.....+..   .... . .|.|+.|+....
T Consensus        95 ~~~~~Y~Cp~C~~~y~~~ea~~~---~d~~-~-~f~Cp~Cg~~l~  134 (147)
T smart00531       95 TNNAYYKCPNCQSKYTFLEANQL---LDMD-G-TFTCPRCGEELE  134 (147)
T ss_pred             cCCcEEECcCCCCEeeHHHHHHh---cCCC-C-cEECCCCCCEEE
Confidence            44567899999999885544321   1111 2 299999997553

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=82.39  E-value=0.58  Score=21.53  Aligned_cols=33  Identities=18%  Similarity=0.472  Sum_probs=21.7

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccCh
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQK   59 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~   59 (78)
                      ..|.|+.|++.        .+.+.-++   -|.|..|+..|.-.
T Consensus        34 ~~~~Cp~C~~~--------~VkR~a~G---IW~C~kCg~~fAGg   66 (89)
T COG1997          34 AKHVCPFCGRT--------TVKRIATG---IWKCRKCGAKFAGG   66 (89)
T ss_pred             cCCcCCCCCCc--------ceeeeccC---eEEcCCCCCeeccc
Confidence            46788888865        22344444   48899998877543

>smart00614 ZnF_BED BED zinc finger

Probab=81.63  E-value=1.6  Score=17.58  Aligned_cols=20  Identities=20%  Similarity=0.630  Sum_probs=10.7

Q ss_pred             ccCCCcccccCh-----hHHHHHHh
Q psy12014         48 RCPLCSYRAKQK-----IHLTTHMA   67 (78)
Q Consensus        48 ~c~~c~~~f~~~-----~~l~~h~~   67 (78)
                      .|..|++.+...     ++|..|+.
T Consensus        20 ~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       20 KCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EecCCCCEeeeCCCCCcHHHHHHHH
Confidence            455565544433     45666655

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>KOG2593|consensus

Probab=81.35  E-value=0.65  Score=27.50  Aligned_cols=41  Identities=15%  Similarity=0.393  Sum_probs=27.1

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      +-.+....|.|+.|.+.|..-..++   ..... .-.|.|..|+.
T Consensus       121 ~d~t~~~~Y~Cp~C~kkyt~Lea~~---L~~~~-~~~F~C~~C~g  161 (436)
T KOG2593|consen  121 RDDTNVAGYVCPNCQKKYTSLEALQ---LLDNE-TGEFHCENCGG  161 (436)
T ss_pred             hhccccccccCCccccchhhhHHHH---hhccc-CceEEEecCCC
Confidence            4455667899999999998766553   32221 22488888864

>PF13878 zf-C2H2_3: zinc-finger of acetyl-transferase ESCO

Probab=80.21  E-value=2  Score=16.76  Aligned_cols=24  Identities=21%  Similarity=0.539  Sum_probs=15.9

Q ss_pred             eecCCchhhcC--CHHHHHHHhhccc
Q psy12014         18 FSCSDCSRVYK--KKASLTRHQTYEC   41 (78)
Q Consensus        18 ~~c~~c~~~f~--~~~~l~~h~~~h~   41 (78)
                      -.|..||..+.  ....-..|.+.|.
T Consensus        14 ~~C~~CgM~Y~~~~~eD~~~H~~yH~   39 (41)
T PF13878_consen   14 TTCPTCGMLYSPGSPEDEKLHKKYHD   39 (41)
T ss_pred             cCCCCCCCEECCCCHHHHHHHHHHHh
Confidence            47888888776  3455666666553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	78
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	9e-04

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 41.7 bits (99), Expect = 4e-07
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAI 68
            CS+CS     KA+L  H+   C  +P ++C  CS+  KQ  +L+ HM  
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKHMKK 59

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.6 bits (98), Expect = 6e-07
 Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 4/56 (7%)

Query: 18 FSCSDCSRVYKKKASLTRHQ---TYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH 70
            C  C    ++KASL  HQ            + C  C  R ++   +  H +  H
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHRSKSH 62

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.7 bits (91), Expect = 7e-06
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 18 FSCSDCSRVYKKKASLTRHQTYECGQQPK-YRCPLCSYRAKQKIHLTTHMAIRHHK 72
          + C  CSRVY   ++  RH      +  K Y CP C     +K ++T H+ I  HK
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI-IHK 65

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 35.2 bits (82), Expect = 2e-04
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 18 FSCSDCSRVYKKKASLTRHQTYECGQQPK-YRCPLCSYRAKQKIHLTTHMAIRH 70
          + C  C   + +  ++  H   +  +    + CP C     +K  L  H+  +H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 33.2 bits (75), Expect = 9e-04
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 20 CSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKK 73
          C +C    KK + L +H       +P Y C  C++  K K +LT HM  + H K
Sbjct: 4  CEECGIRXKKPSMLKKHIRTHTDVRP-YHCTYCNFSFKTKGNLTKHMKSKAHSK 56

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	78
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.92
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.87
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.87
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.86
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.85
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.84
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.83
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.82
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.82
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.81
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.81
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.81
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.81
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.81
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.8
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.8
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.8
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.79
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.79
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.79
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.78
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.77
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.77
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.77
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.75
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.74
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.74
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.73
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.72
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.72
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.71
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.71
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.71
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.69
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.69
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.68
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.68
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.67
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.66
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.64
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.63
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.62
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.62
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.61
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.61
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.6
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.6
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.6
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.6
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.6
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.6
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.6
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.6
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.6
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.6
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.6
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.6
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.6
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.6
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.6
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.6
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.6
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.6
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.59
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.59
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.59
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.59
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.59
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.59
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.59
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.59
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.59
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.59
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.59
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.59
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.59
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.59
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.59
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.58
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.58
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.58
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.58
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.58
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.58
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.58
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.58
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.58
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.58
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.58
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.58
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.58
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.58
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.58
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.58
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.58
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.58
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.58
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.58
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.58
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.58
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.58
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.58
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.58
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.58
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.58
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.58
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.58
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.57
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.57
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.57
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.57
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.57
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.57
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.57
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.57
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.57
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.57
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.57
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.57
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.57
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.57
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.57
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.57
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.57
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.57
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.57
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.57
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.57
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.57
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.57
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.57
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.57
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.57
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.57
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.57
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.57
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.57
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.57
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.57
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.57
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.57
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.57
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.57
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.57
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.57
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.57
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.56
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.56
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.56
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.56
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.56
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.56
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.56
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.56
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.56
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.56
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.56
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.56
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.56
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.55
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.55
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.55
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.55
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.55
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.55
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.55
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.55
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.55
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.55
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.55
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.55
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.55
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.55
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.54
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.54
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.54
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.54
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.54
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.53
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.53
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.53
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.53
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.53
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.52
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.52
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.52
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.52
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.52
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.52
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.51
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.51
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.51
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.51
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.51
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.51
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.5
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.5
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.5
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.5
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.49
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.49
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.49
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.49
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.49
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.48
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.48
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.48
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.48
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.48
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.48
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.47
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.47
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.47
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.44
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.44
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.43
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.43
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.4
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.39
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.38
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.37
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.36
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.35
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.34
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.33
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.33
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.33
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.32
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.32
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.31
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.31
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.29
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.29
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.28
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.27
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.25
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.24
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.24
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.23
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.23
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.23
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.22
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.22
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.2
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.2
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.18
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.18
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.18
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.17
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.17
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.16
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.16
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.16
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	99.14
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.14
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.13
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.13
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.13
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.13
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.12
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.12
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.11
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.1
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	99.1
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.08
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.08
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	99.08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.07
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	99.07
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	99.06
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	99.05
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	99.04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	99.04
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	99.04
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	99.03
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	99.02
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	99.02
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	99.02
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	99.01
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.99
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.99
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.98
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.97
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.49
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.93
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.92
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.92
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.42
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.88
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.87
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.87
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.86
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.86
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.85
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.84
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.83
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.8
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.79
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.79
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.79
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.77
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.74
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.73
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.71
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.71
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.66
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.66
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	98.1
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.1
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.64
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.07
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.63
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.61
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	98.03
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.56
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.55
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.19
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	98.06
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.63
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.05
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.68
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.44
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.05
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	95.61
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	94.86
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	94.36
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.7
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.57
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	92.47
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	91.8
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	90.62
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	89.76
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	88.74
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	88.71
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.32
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	87.45
2kdx_A	119	HYPA, hydrogenase/urease nickel incorporation prot	85.72
1lko_A	191	Rubrerythrin all-iron(II) form; reduced form, DIIR	85.23
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	85.06
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	84.95

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.92  E-value=1.9e-25  Score=94.84  Aligned_cols=59  Identities=22%  Similarity=0.538  Sum_probs=56.2

Q ss_pred             CCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         14 GGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        14 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      .|+||.|..|++.|.....|..|+++|++ ++||.|..|+++|.....|..|+++|+||+
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLG-YRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHT-CCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCC-CcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            48999999999999999999999999999 889999999999999999999999999975

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.89  E-value=2.4e-23  Score=92.18  Aligned_cols=69  Identities=17%  Similarity=0.424  Sum_probs=64.8

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ....+.++++|.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG-EKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC-SCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCC-CcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34567789999999999999999999999999999 8899999999999999999999999999999998

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=3.8e-24  Score=103.28  Aligned_cols=69  Identities=16%  Similarity=0.338  Sum_probs=37.7

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      +..++++|+++++|.|..|++.|.....|..|+++|++ ++|+.|..|++.|.....|..|+++|++++|
T Consensus        38 L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p  106 (133)
T 2lt7_A           38 LRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTG-ERRYQCLACGKSFINYQFMSSHIKSVHSQDP  106 (133)
T ss_dssp             HHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHT-CCCEEESSSCCEESSHHHHHHHHHHHTCCCT
T ss_pred             HHHHHHHcCCCCCeeCCccCeecccccchhhhccccCC-CccccCCCCCCCcCCHHHHHHHhHHhcCCCC
Confidence            33444555555555555555555555555555555555 4455555555555555555555555555443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=1.4e-22  Score=97.80  Aligned_cols=71  Identities=21%  Similarity=0.277  Sum_probs=66.9

Q ss_pred             hhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          6 KLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         6 ~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ..+..+++|+++|.|.+|++.|.....|..|+++|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   81 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSW-EKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQC   81 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHC-CSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEE
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCC-CCCeeCCccCeecccccchhhhccccCCCccccC
Confidence            4456789999999999999999999999999999999 8899999999999999999999999999999987

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.87  E-value=3.4e-22  Score=87.83  Aligned_cols=68  Identities=24%  Similarity=0.500  Sum_probs=61.4

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccc
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLG   75 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~   75 (78)
                      .....++++++|.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|+|++||
T Consensus         7 ~~~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A            7 HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG-EKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             ----CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC-CCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccccccCCCCCeECCCCCceeCCHHHHHHHHHHcCC-CCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            344567889999999999999999999999999999 88999999999999999999999999999986

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.87  E-value=1.8e-22  Score=93.48  Aligned_cols=66  Identities=20%  Similarity=0.260  Sum_probs=60.9

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhh-cc---cCCCCCcccCCCcccccChhHHHHH-HhhhhcCccccC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQT-YE---CGQQPKYRCPLCSYRAKQKIHLTTH-MAIRHHKKLGKI   77 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h---~~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~g~k~~~~   77 (78)
                      .-+|++||.|..|++.|.....|..|++ .|   .+ ++||.|..|++.|.....|..| +++|+|++||+|
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~-ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C   82 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVL-NSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKL   82 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCC-SCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEE
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCC-CCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeC
Confidence            3478999999999999999999999997 58   55 7889999999999999999999 899999999987

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.86  E-value=2.2e-21  Score=84.40  Aligned_cols=65  Identities=31%  Similarity=0.542  Sum_probs=61.4

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCcccc
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGK   76 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~   76 (78)
                      .++++++|.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|++++|.-
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCC-SCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            57889999999999999999999999999999 888999999999999999999999999999863

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=4.3e-21  Score=83.94  Aligned_cols=66  Identities=21%  Similarity=0.484  Sum_probs=61.8

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      .+++|+++++|.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|+++.+
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG-EKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGC-SCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCC-CCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            46789999999999999999999999999999999 8899999999999999999999999998754

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=9e-21  Score=88.06  Aligned_cols=72  Identities=13%  Similarity=0.321  Sum_probs=65.9

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +..+.+.|.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|.+
T Consensus        33 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           33 LLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK-EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCC-CCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCC-CCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            55677889999999999999999999999999999999 8889999999999999999999999999999865

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=8e-21  Score=85.30  Aligned_cols=74  Identities=14%  Similarity=0.240  Sum_probs=66.8

Q ss_pred             chhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCC---CCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          4 TPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQ---PKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         4 ~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~---~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+..++++|+++++|.|..|++.|.....|..|+..+....   ++|.|..|++.|.....|..|+++|++++++.|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~   78 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEG   78 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCccc
Confidence            35667889999999999999999999999999998766533   689999999999999999999999999999876

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=1.3e-21  Score=90.06  Aligned_cols=73  Identities=21%  Similarity=0.292  Sum_probs=65.8

Q ss_pred             chhhhhhhccCCCceecCCchhhcC-CHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCcccc
Q psy12014          4 TPKLIDSLYKGGGLFSCSDCSRVYK-KKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGK   76 (78)
Q Consensus         4 ~~~~~~~~~~~~~~~~c~~c~~~f~-~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~   76 (78)
                      ....++++|+++++|.|..|++.|. ....|..|++.|.+..+||.|..|++.|.....|..|+++|++++|..
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            3566788999999999999999999 999999999998763457999999999999999999999999999863

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.82  E-value=2e-20  Score=91.78  Aligned_cols=72  Identities=19%  Similarity=0.431  Sum_probs=66.8

Q ss_pred             hhhhhhhccCCCceecCC--chhhcCCHHHHHHHhhcccCCCCCcccCC--CcccccChhHHHHHHhhhhcCccccC
Q psy12014          5 PKLIDSLYKGGGLFSCSD--CSRVYKKKASLTRHQTYECGQQPKYRCPL--CSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +..+++.|+++++|.|..  |++.|.....|..|++.|.+ .+||.|..  |++.|.....|..|+++|+|++||+|
T Consensus        78 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A           78 LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG-EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             HHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCS-SCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             HHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCC-CCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            556778899999999998  99999999999999999999 88899997  99999999999999999999999988

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.82  E-value=1.6e-20  Score=84.89  Aligned_cols=69  Identities=20%  Similarity=0.366  Sum_probs=60.1

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      +..+.+.|.++++|.|..|++.|.....|..|+..|.+ .+||.|..|++.|.....|..|+++|+|+++
T Consensus        22 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           22 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             HHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCC-CCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence            55677888999999999999999999999999999998 7889999999999999999999999998864

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.82  E-value=6.3e-20  Score=81.27  Aligned_cols=65  Identities=23%  Similarity=0.468  Sum_probs=61.1

Q ss_pred             ccCCCceecCC--chhhcCCHHHHHHHhh-cccCCCCCcccCC--CcccccChhHHHHHHhhhhcCccccC
Q psy12014         12 YKGGGLFSCSD--CSRVYKKKASLTRHQT-YECGQQPKYRCPL--CSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        12 ~~~~~~~~c~~--c~~~f~~~~~l~~h~~-~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+++++|.|..  |++.|.....|..|++ .|.+ .+||.|..  |++.|.....|..|+++|++++||+|
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C   71 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   71 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeC
Confidence            46789999997  9999999999999999 7999 88899999  99999999999999999999999988

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.81  E-value=2.4e-20  Score=87.99  Aligned_cols=72  Identities=24%  Similarity=0.454  Sum_probs=67.3

Q ss_pred             hhhhhhhccCCCceecC--CchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          5 PKLIDSLYKGGGLFSCS--DCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +..+.+.|.++++|.|.  .|++.|.....|..|+..|.+ .++|.|..|++.|.....|..|+++|+++++|+|
T Consensus        24 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           24 LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG-VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC   97 (119)
T ss_dssp             HHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHTCCCEEC
T ss_pred             HHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC-CCCccCCccCchhCCHHHHHHHHHHhcCCCCeeC
Confidence            55677889999999999  799999999999999999999 8889999999999999999999999999999988

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=3e-20  Score=79.90  Aligned_cols=62  Identities=29%  Similarity=0.561  Sum_probs=57.3

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhc-c-cCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTY-E-CGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~-h-~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +++|+++++|.|..|++.|.....|..|+.. | .+ .+||.|..|++.|.....|..|+++++|
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~-~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN-VKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSS-CCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCC-CcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            5689999999999999999999999999988 7 46 8899999999999999999999999986

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=8.1e-20  Score=80.70  Aligned_cols=71  Identities=17%  Similarity=0.350  Sum_probs=62.0

Q ss_pred             chhhhhhhccCCCceecCCchhhcCCHHHHHHHhh-cccCCCCCcccCCCcccccChhHHHHHHhhhhc-Ccc
Q psy12014          4 TPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQT-YECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH-KKL   74 (78)
Q Consensus         4 ~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g-~k~   74 (78)
                      .+..++++|+++++|.|..|++.|.....|..|+. .|.++.++|.|..|++.|.....|..|++.+++ +.|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            35567889999999999999999999999999997 687734789999999999999999999998655 444

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.81  E-value=3.4e-20  Score=93.53  Aligned_cols=70  Identities=24%  Similarity=0.466  Sum_probs=35.6

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+.+.|.++++|.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus        95 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  164 (190)
T 2i13_A           95 AHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG-EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKC  164 (190)
T ss_dssp             HHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEEC
T ss_pred             HHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC-CCCeECCCCCcccCCHHHHHHHHHhcCCCCCeEC
Confidence            344444555555555555555555555555555554 4445555555555555555555555555555444

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.81  E-value=6.2e-20  Score=82.53  Aligned_cols=64  Identities=17%  Similarity=0.298  Sum_probs=58.0

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHH-hhhhcCc
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHM-AIRHHKK   73 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~-~~~~g~k   73 (78)
                      ...++++++|.|.+|++.|.....|..|+++|.+ ++||.|..|++.|.....|..|+ +.|++|.
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHA-AQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSC-SSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccC-CCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3567778999999999999999999999999999 88999999999999999999996 5687764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=8.3e-20  Score=83.83  Aligned_cols=67  Identities=21%  Similarity=0.280  Sum_probs=60.3

Q ss_pred             hhhhhhhccCCCceecCCchhhc-CCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHH-HhhhhcCc
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVY-KKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTH-MAIRHHKK   73 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f-~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~g~k   73 (78)
                      +..+.+.+.++++|.|..|++.| .....|..|++.| + ++||.|..|++.|.....|..| +++|+++.
T Consensus        22 ~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~-~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           22 EEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K-QEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             HHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-C-CCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             HHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C-CCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            34556778899999999999999 9999999999999 8 8899999999999999999999 88887643

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.1e-19  Score=83.08  Aligned_cols=71  Identities=18%  Similarity=0.386  Sum_probs=58.0

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCcccc
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGK   76 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~   76 (78)
                      +..+.+.|.++++|.|..|++.|.....|..|+..|.+ .++|.|..|++.|.....|..|+++|+|+++..
T Consensus        24 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           24 LKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD-ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS   94 (96)
T ss_dssp             HHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCC-CCCEECSSSSCEESSHHHHHHHHTTCCSCCCCC
T ss_pred             HHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCC-CCCccCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            45667778888888888888888888888888888888 777888888888888888888888888877643

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=6.9e-20  Score=85.57  Aligned_cols=65  Identities=29%  Similarity=0.539  Sum_probs=45.7

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|+++++|.| .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|+|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   68 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC   68 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSC-CCSEECTTTSCEESSSHHHHHHHTTTCCCCCEEC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCC-CcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeC
Confidence            4666777777 677777777777777777766 5667777777777777777777777777777665

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=2.8e-19  Score=81.67  Aligned_cols=66  Identities=24%  Similarity=0.519  Sum_probs=62.5

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|+|
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   67 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG-VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC   67 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCCCCEEC
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCC-CCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccC
Confidence            35778999999999999999999999999999 8889999999999999999999999999999987

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.80  E-value=8.3e-20  Score=92.11  Aligned_cols=70  Identities=21%  Similarity=0.493  Sum_probs=48.6

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccc
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLG   75 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~   75 (78)
                      +..+.+.|+++++|.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|+|++||
T Consensus       121 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          121 LRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG-EKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCC-CCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            44566677777777777777777777777777777777 66777777777777777777777777777765

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.79  E-value=3.4e-19  Score=84.62  Aligned_cols=71  Identities=21%  Similarity=0.447  Sum_probs=52.7

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC--CcccccChhHHHHHHhhhhcCccccC
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL--CSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +..+.+.| ++++|.|..|++.|.....|..|+..|.+ .++|.|..  |++.|.....|..|+++|+|+++|+|
T Consensus        23 l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   95 (124)
T 1ubd_C           23 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   95 (124)
T ss_dssp             HHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCC
T ss_pred             HHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceEC
Confidence            34455666 67777777777777777777777777777 66777764  77777777777777777777777776

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.79  E-value=1.4e-19  Score=75.81  Aligned_cols=57  Identities=30%  Similarity=0.637  Sum_probs=50.4

Q ss_pred             CCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014         14 GGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        14 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      |+++|.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            57899999999999999999999999999 8889999999999999999999999874

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=4.1e-19  Score=84.20  Aligned_cols=72  Identities=21%  Similarity=0.442  Sum_probs=63.0

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhc---ccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTY---ECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~---h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +..+.+.|.++++|.|..|++.|.....|..|+..   +.+ .++|.|..|++.|.....|..|+++|++++||+|
T Consensus        23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (124)
T 2dlq_A           23 LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS-EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKC   97 (124)
T ss_dssp             HHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSC-CCCEECSSSCCEESSHHHHHHHHHHHSSSCSEEC
T ss_pred             HHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCCccC
Confidence            55677888999999999999999999999999885   456 6789999999999999999999999999999887

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.78  E-value=3.2e-19  Score=79.35  Aligned_cols=66  Identities=17%  Similarity=0.349  Sum_probs=58.5

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +..+.+.|.++++|.|..|++.|.....|..|+..|.+ .+||.|..|++.|.....|..|+++|+|
T Consensus        17 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           17 LSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG-EKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHT-CCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             HHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcC-CCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            55677788899999999999999999999999999998 7889999999999999999999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=5.3e-19  Score=80.60  Aligned_cols=68  Identities=21%  Similarity=0.356  Sum_probs=44.9

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCC-CCCcccCCCcccccChhHHHHHHh-hhhcC
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQ-QPKYRCPLCSYRAKQKIHLTTHMA-IRHHK   72 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~-~~~~~c~~c~~~f~~~~~l~~h~~-~~~g~   72 (78)
                      +..+.+.|.++++|.|..|++.|.....|..|++.|.+. .++|.|..|++.|.....|..|++ .|.|+
T Consensus        23 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           23 LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             HHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            445556666777777777777777777777777766662 156777777777777777777764 55554

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=3.5e-20  Score=87.15  Aligned_cols=75  Identities=24%  Similarity=0.291  Sum_probs=64.0

Q ss_pred             CchhhhhhhccCCCceecCCchhhcCCHHHHHHHhhc--ccCCCCCcccCCCcccc--cChhHHHHHHhhhhcCccccC
Q psy12014          3 TTPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTY--ECGQQPKYRCPLCSYRA--KQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         3 ~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~--h~~~~~~~~c~~c~~~f--~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +.+..+.++|+++++|.|..|++.|.....|..|++.  |.+....+.|..|++.|  .....|..|+++|++++||+|
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            3466778899999999999999999999999999998  76623334599999888  788889999999999999987

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.77  E-value=5.3e-19  Score=79.86  Aligned_cols=63  Identities=29%  Similarity=0.521  Sum_probs=58.5

Q ss_pred             CCCceecC--CchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         14 GGGLFSCS--DCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        14 ~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |+++|.|.  .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++|+|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   65 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC   65 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEEC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCC-CCCccCCCCCcccCCHHHHHHHHHHcCCCCCccC
Confidence            57899998  699999999999999999999 8889999999999999999999999999999987

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=6.4e-19  Score=77.92  Aligned_cols=65  Identities=22%  Similarity=0.351  Sum_probs=57.6

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccC--CCCCcccCCCcccccChhHHHHHH-hhhhcCccc
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECG--QQPKYRCPLCSYRAKQKIHLTTHM-AIRHHKKLG   75 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~--~~~~~~c~~c~~~f~~~~~l~~h~-~~~~g~k~~   75 (78)
                      .|+++++|.|..|++.|.....|..|++.|.+  ..++|.|..|++.|.....|..|+ ..|.++++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47899999999999999999999999999984  267899999999999999999999 567766654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.77  E-value=8.3e-19  Score=81.37  Aligned_cols=66  Identities=26%  Similarity=0.397  Sum_probs=62.1

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ...++++|.|..|++.|.....|..|+..|.+ .++|.|..|++.|.....|..|+++|+++++|+|
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   76 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTD-ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC   76 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCC-SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSC
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeEC
Confidence            34568899999999999999999999999999 8889999999999999999999999999999988

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.77  E-value=7.1e-19  Score=73.57  Aligned_cols=56  Identities=30%  Similarity=0.587  Sum_probs=53.3

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      ||.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS-CCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCC-CCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999999999 889999999999999999999999999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.76  E-value=2.8e-18  Score=78.22  Aligned_cols=60  Identities=25%  Similarity=0.405  Sum_probs=56.1

Q ss_pred             ceecCCchhhcCCHHHHHHHhhc-ccCCCCC--------cccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTY-ECGQQPK--------YRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~-h~~~~~~--------~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+.|..|++.|.....|..|++. |.+ .++        |.|..|++.|.....|..|+++|+|++||+|
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~-~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVG-GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTC-CTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CCcccccccccCCHHHHHHHHHHhccC-CCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            36799999999999999999998 888 766        8999999999999999999999999999998

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=2e-18  Score=76.71  Aligned_cols=60  Identities=27%  Similarity=0.526  Sum_probs=57.6

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ||.|..|++.|.....|..|+..|.+ .+++.|..|++.|.....|..|++.|+++++|+|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   60 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD-TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC   60 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT-CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEEC
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC-CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcC
Confidence            68999999999999999999999999 8889999999999999999999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.75  E-value=2.9e-18  Score=81.41  Aligned_cols=72  Identities=22%  Similarity=0.416  Sum_probs=60.9

Q ss_pred             chhhhhhhccCCCceecCC--chhhcCCHHHHHHHhhcccCCCCCcccC--CCcccccChhHHHHHHhhhhcCcccc
Q psy12014          4 TPKLIDSLYKGGGLFSCSD--CSRVYKKKASLTRHQTYECGQQPKYRCP--LCSYRAKQKIHLTTHMAIRHHKKLGK   76 (78)
Q Consensus         4 ~~~~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k~~~   76 (78)
                      .+..+.+.|.++++|.|..  |++.|.....|..|++.|.+ .+||.|.  .|++.|.....|..|+++|++++++.
T Consensus        49 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           49 KLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG-DRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHC-CCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            3567788999999999986  99999999999999999999 8889996  59999999999999999999999863

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.5e-18  Score=80.69  Aligned_cols=65  Identities=17%  Similarity=0.201  Sum_probs=31.4

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+.|+++++|.|..|++.|.....|..|++.|.   +||.|..|++.|.....|..|++ |+++++|+|
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~---~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C   72 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTC   72 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH---HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEE
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC---CCccCCCCCCccCCHHHHHHHHH-cCCCCCccC
Confidence            344555555555555555555555555555442   13444444444444444444442 444444443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=2.3e-18  Score=84.33  Aligned_cols=72  Identities=18%  Similarity=0.264  Sum_probs=56.8

Q ss_pred             hhhhhhhccCCCceecCC--chhhcCCHHHHHHHhhcccCCCCCcccCC--CcccccChhHHHHHH-hhhhcCccccC
Q psy12014          5 PKLIDSLYKGGGLFSCSD--CSRVYKKKASLTRHQTYECGQQPKYRCPL--CSYRAKQKIHLTTHM-AIRHHKKLGKI   77 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~-~~~~g~k~~~~   77 (78)
                      +..+.+.|+++++|.|..  |++.|.....|..|++.|.+ .+||.|..  |++.|.....|..|+ ++|+++++|+|
T Consensus        55 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C  131 (155)
T 2gli_A           55 LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVC  131 (155)
T ss_dssp             HHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEEC
T ss_pred             HHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeC
Confidence            455667778888888874  88888888888888888887 67788887  888888888888887 77888888776

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.1e-18  Score=74.80  Aligned_cols=64  Identities=27%  Similarity=0.576  Sum_probs=58.2

Q ss_pred             hhhhhhccCCCceecC--CchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhh
Q psy12014          6 KLIDSLYKGGGLFSCS--DCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus         6 ~~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      ......++++++|.|.  .|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|+
T Consensus         8 ~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            8 NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             chhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCC-CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3456678999999997  599999999999999999999 888999999999999999999999874

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.3e-17  Score=75.93  Aligned_cols=65  Identities=25%  Similarity=0.523  Sum_probs=61.4

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcC--ccccC
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHK--KLGKI   77 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~--k~~~~   77 (78)
                      .+++++|.|..|++.|.....|..|+..|.+ .++|.|..|++.|.....|..|+++|+++  ++|+|
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C   68 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC   68 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCS-SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCC
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCC-CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceEC
Confidence            4678999999999999999999999999999 88899999999999999999999999997  89987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=1.6e-17  Score=76.21  Aligned_cols=63  Identities=22%  Similarity=0.460  Sum_probs=32.7

Q ss_pred             hhhhhccCCCceecC--CchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhh
Q psy12014          7 LIDSLYKGGGLFSCS--DCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      .+.+.|.++++|.|.  .|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|+
T Consensus        35 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           35 AHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG-AKPFQCGVCNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             HHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTS-CCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred             HHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCC-CCCeECCCCcCccCCHHHHHHHHHHhC
Confidence            344445555555553  355555555555555555555 444555555555555555555555553

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1e-17  Score=70.65  Aligned_cols=56  Identities=25%  Similarity=0.530  Sum_probs=52.0

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHH-hhhhcC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHM-AIRHHK   72 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~-~~~~g~   72 (78)
                      +||.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS-SCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCC-CCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            589999999999999999999999999 88999999999999999999996 677765

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.72  E-value=1.6e-17  Score=83.70  Aligned_cols=73  Identities=18%  Similarity=0.263  Sum_probs=57.3

Q ss_pred             hhhhhhhccCCCceecC--CchhhcCCHHHHHHHh-hcccCCCCCccc--CCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          5 PKLIDSLYKGGGLFSCS--DCSRVYKKKASLTRHQ-TYECGQQPKYRC--PLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~-~~h~~~~~~~~c--~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +..+.+.|.++++|.|.  .|++.|.....|..|+ ..|....++|.|  ..|++.|.....|..|+++|+|++||+|
T Consensus        60 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C  137 (190)
T 1tf6_A           60 LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC  137 (190)
T ss_dssp             HHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBC
T ss_pred             HHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccC
Confidence            45566778888888888  7888888888888887 566332667888  7788888888888888888888888877

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.72  E-value=3.7e-18  Score=76.99  Aligned_cols=60  Identities=22%  Similarity=0.388  Sum_probs=52.7

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCcccc
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGK   76 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~   76 (78)
                      ++||.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|+++|++ .++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~   60 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRHRDIQHI-LPIL   60 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHHHHTH-HHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCC-CCCccCCCCCCccCCHHHHHHHHHHhCC-Ccch
Confidence            5789999999999999999999999998 7889999999999999999999998885 4443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=3.2e-18  Score=79.61  Aligned_cols=69  Identities=16%  Similarity=0.309  Sum_probs=61.7

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHh-hhhcCccccC
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMA-IRHHKKLGKI   77 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~g~k~~~~   77 (78)
                      +..+++.|  +++|.|..|++.|.....|..|+. |.+ ++||.|..|++.|.....|..|++ .|+++++|.+
T Consensus        32 l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           32 QGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCC-CCCccCccccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            45566666  469999999999999999999996 988 889999999999999999999997 9999999875

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.71  E-value=1.8e-17  Score=78.06  Aligned_cols=64  Identities=23%  Similarity=0.365  Sum_probs=60.6

Q ss_pred             cCCCceecCC--chhhcCCHHHHHHHhhcccCCCCCcccC--CCcccccChhHHHHHHhhhhcCccccC
Q psy12014         13 KGGGLFSCSD--CSRVYKKKASLTRHQTYECGQQPKYRCP--LCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        13 ~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +++++|.|..  |++.|.....|..|+..|.+ .+||.|.  .|++.|.....|..|+++|+++++|+|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   69 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC   69 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccC
Confidence            5789999997  99999999999999999999 8889999  799999999999999999999999987

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.71  E-value=1.5e-17  Score=81.55  Aligned_cols=72  Identities=21%  Similarity=0.297  Sum_probs=61.7

Q ss_pred             hhhhhhh-ccCCCc--------eecCCchhhcCCHHHHHHHhhcccCCCCCcccCC--CcccccChhHHHHHHhhhhcCc
Q psy12014          5 PKLIDSL-YKGGGL--------FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL--CSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus         5 ~~~~~~~-~~~~~~--------~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      +..+.+. |.++.+        +.|..|++.|.....|..|++.|.+ .++|.|..  |++.|.....|..|+++|++++
T Consensus        41 L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~  119 (155)
T 2rpc_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG-EKPFPCPFPGCGKIFARSENLKIHKRTHTGEK  119 (155)
T ss_dssp             HHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC-CCSEECSCTTTCCEESCHHHHHHHHTTTCSSC
T ss_pred             HHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC-CCcccCCcCCCCCccCCHHHHHHHHHhhCCCC
Confidence            3455554 777655        7899999999999999999999998 78899988  9999999999999999999999


Q ss_pred             cccC
Q psy12014         74 LGKI   77 (78)
Q Consensus        74 ~~~~   77 (78)
                      +|+|
T Consensus       120 ~~~C  123 (155)
T 2rpc_A          120 PFKC  123 (155)
T ss_dssp             SBCC
T ss_pred             CccC
Confidence            9987

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=2e-17  Score=77.12  Aligned_cols=67  Identities=21%  Similarity=0.370  Sum_probs=62.2

Q ss_pred             chhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014          4 TPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus         4 ~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      .+..+.+.|.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+.
T Consensus        24 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           24 QRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG-IKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCC-CCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCC-CCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            356778889999999999999999999999999999999 8889999999999999999999999875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.71  E-value=1.9e-17  Score=74.57  Aligned_cols=64  Identities=23%  Similarity=0.434  Sum_probs=40.4

Q ss_pred             hhhhhhhccCCCceecC--CchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhh
Q psy12014          5 PKLIDSLYKGGGLFSCS--DCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      +..+.+.|.++++|.|.  .|++.|.....|..|+..|.+ .+||.|..|++.|.....|..|+++|
T Consensus        23 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           23 LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG-HRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             HHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHC-CCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             HHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCC-CCCccCCCCCcccCCHHHHHHHHHhh
Confidence            34455566666666665  366666666666666666666 55666666666666666666666655

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.69  E-value=7.1e-17  Score=72.66  Aligned_cols=63  Identities=21%  Similarity=0.428  Sum_probs=58.4

Q ss_pred             CCCceecCC--chhhcCCHHHHHHHhhcccCCCCCcccC--CCcccccChhHHHHHHhhhhcCccccC
Q psy12014         14 GGGLFSCSD--CSRVYKKKASLTRHQTYECGQQPKYRCP--LCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        14 ~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ..++|.|..  |++.|.....|..|+..|.+ .++|.|.  .|++.|.....|..|+++|+++++|+|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   68 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTG-EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC   68 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHTTSCS-SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHHhcCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccC
Confidence            356899999  99999999999999999999 8889997  699999999999999999999999987

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.69  E-value=3.1e-17  Score=78.41  Aligned_cols=59  Identities=22%  Similarity=0.410  Sum_probs=55.3

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      .|++++||.|..|++.|.....|..|++.|   .+||.|..|++.|.....|..|+++|+|.
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHHHHT---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHHHHC---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            588899999999999999999999999998   45799999999999999999999999986

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=4.3e-20  Score=80.62  Aligned_cols=67  Identities=18%  Similarity=0.299  Sum_probs=59.2

Q ss_pred             CchhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014          3 TTPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus         3 ~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +.+..++++|+++++|.|..|++.|.....|..        .++|.|..|++.|.....|..|+++|+|++||+|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            346677889999999999999999988766543        4579999999999999999999999999999998

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=4.2e-17  Score=70.08  Aligned_cols=60  Identities=20%  Similarity=0.425  Sum_probs=55.1

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC-CCcccccChhHHHHHHhhhhcCcc
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP-LCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~-~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      ..+++||.|..|++.|. ...|..|++. .+ ++||.|. .|++.|.....|..|+++|...++
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~-~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CP-RLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CS-SSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cC-CcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45789999999999999 9999999998 77 8899999 999999999999999999987765

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.67  E-value=2.1e-16  Score=72.43  Aligned_cols=64  Identities=25%  Similarity=0.470  Sum_probs=59.3

Q ss_pred             cCCCceecCC--chhhcCCHHHHHHHhhcccCCCCCcccC--CCcccccChhHHHHHHhhhhcCccccC
Q psy12014         13 KGGGLFSCSD--CSRVYKKKASLTRHQTYECGQQPKYRCP--LCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        13 ~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ..+++|.|..  |++.|.....|..|++.|.+ .++|.|.  .|++.|.....|..|+++|+++++|+|
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   78 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC   78 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBC
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeEC
Confidence            4467899997  99999999999999999999 8889996  699999999999999999999999988

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=2.6e-16  Score=74.49  Aligned_cols=63  Identities=25%  Similarity=0.567  Sum_probs=57.3

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHh-hhhcCcc
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMA-IRHHKKL   74 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~g~k~   74 (78)
                      .+.++++|.|..|++.|.....|..|++.|.+ .+||.|..|++.|.....|..|++ .|.|+..
T Consensus        60 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~s  123 (124)
T 2dlq_A           60 MNRSEQVFTCSVCQETFRRRMELRLHMVSHTG-EMPYKCSSCSQQFMQKKDLQSHMIKLHSGPSS  123 (124)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHSS-SCSEECSSSCCEESSHHHHHHHHHHTSSCSSC
T ss_pred             cCCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCccCCCccchhCCHHHHHHHHHHHCCCCCC
Confidence            36789999999999999999999999999999 889999999999999999999987 5766653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=1e-16  Score=78.44  Aligned_cols=66  Identities=23%  Similarity=0.433  Sum_probs=61.4

Q ss_pred             hhhhhhhccCCCceecCC--chhhcCCHHHHHHHh-hcccCCCCCcccCC--CcccccChhHHHHHHhhhhc
Q psy12014          5 PKLIDSLYKGGGLFSCSD--CSRVYKKKASLTRHQ-TYECGQQPKYRCPL--CSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~-~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +..+.+.|+++++|.|..  |++.|.....|..|+ +.|.+ .+||.|..  |++.|.....|..|+++|+|
T Consensus        85 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           85 LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN-EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS-CCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC-CCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            567788899999999998  999999999999998 88999 88899998  99999999999999999876

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.63  E-value=3.6e-16  Score=78.78  Aligned_cols=72  Identities=19%  Similarity=0.347  Sum_probs=54.3

Q ss_pred             hhhhhhhccCCCceec--CCchhhcCCHHHHHHHhhcccCCCCCcccC--CCcccccChhHHHHHH-hhh-hcCccccC
Q psy12014          5 PKLIDSLYKGGGLFSC--SDCSRVYKKKASLTRHQTYECGQQPKYRCP--LCSYRAKQKIHLTTHM-AIR-HHKKLGKI   77 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c--~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~-~~~-~g~k~~~~   77 (78)
                      +..+.+.|+++++|.|  ..|++.|.....|..|++.|.+ .++|.|.  .|++.|.....|..|+ +.| .++++|+|
T Consensus        30 L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  107 (190)
T 1tf6_A           30 LQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG-EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVC  107 (190)
T ss_dssp             HHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTT-CCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEE
T ss_pred             HHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccC-CCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeC
Confidence            4556677778888888  6788888888888888888877 6678887  7888888888888887 555 45667765

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.62  E-value=7.6e-16  Score=63.75  Aligned_cols=48  Identities=15%  Similarity=0.322  Sum_probs=44.2

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhh-cccCCCCCcccCCCcccccC
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQT-YECGQQPKYRCPLCSYRAKQ   58 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~~~c~~c~~~f~~   58 (78)
                      ..++++++|.|..|++.|.....|..|++ .|.+ ++||.|..|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCCCCC
Confidence            45788999999999999999999999997 8999 889999999999975

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.62  E-value=6e-16  Score=67.31  Aligned_cols=61  Identities=21%  Similarity=0.368  Sum_probs=54.5

Q ss_pred             hhhhccCCCceecCC--chhhcCCHHHHHHHhhcccCCCCCcccCC--CcccccChhHHHHHHhhh
Q psy12014          8 IDSLYKGGGLFSCSD--CSRVYKKKASLTRHQTYECGQQPKYRCPL--CSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~   69 (78)
                      .....+..++|.|..  |++.|.....|..|++.|.+ ++||.|..  |++.|.....|..|+++|
T Consensus         8 ~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A            8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG-EKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSS-SCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCCCccccCceeCCCCCCccccCCHHHHHHHHHhcCC-CCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            344567789999998  99999999999999999999 88999965  999999999999998875

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=7.3e-16  Score=61.73  Aligned_cols=45  Identities=22%  Similarity=0.307  Sum_probs=32.7

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCC-CSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            345667777777777777777777777777777777 666777665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.61  E-value=8.4e-16  Score=61.57  Aligned_cols=44  Identities=18%  Similarity=0.326  Sum_probs=30.5

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK-QKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSC-CCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            45567777777777777777777777777777776 666776654

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=7.4e-16  Score=61.76  Aligned_cols=44  Identities=20%  Similarity=0.277  Sum_probs=31.9

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSC-SCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            45667777777777777777777777777777777 666777665

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.60  E-value=1.3e-15  Score=67.87  Aligned_cols=50  Identities=28%  Similarity=0.520  Sum_probs=24.3

Q ss_pred             CCchhhcCCHHHHHHHhhcccCCCCCcccCC--CcccccChhHHHHHHhhhhc
Q psy12014         21 SDCSRVYKKKASLTRHQTYECGQQPKYRCPL--CSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        21 ~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~g   71 (78)
                      ..|++.|.....|..|++.|.+ .+||.|..  |++.|.....|..|+++|++
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CCCCcccCCHHHHHHHHHHhCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            4455555444444445444444 44444544  55555444445455444444

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=1e-15  Score=61.32  Aligned_cols=44  Identities=23%  Similarity=0.359  Sum_probs=30.7

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG-KKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSS-CCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcC-CCCCCCCCC
Confidence            45567777777777777777777777777777777 666776655

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.5e-16  Score=62.15  Aligned_cols=44  Identities=14%  Similarity=0.265  Sum_probs=26.6

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR-EKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHS-TTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            34556666666666666666666666666666666 555666544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=7.8e-16  Score=61.68  Aligned_cols=44  Identities=20%  Similarity=0.422  Sum_probs=29.4

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSC-CCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCC-CCCCCCCCC
Confidence            44566667777777777777777777777766766 566666654

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=9.2e-16  Score=61.48  Aligned_cols=44  Identities=25%  Similarity=0.495  Sum_probs=31.2

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSC-SSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            45567777777777777777777777777777777 666777654

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=1e-15  Score=61.36  Aligned_cols=44  Identities=20%  Similarity=0.365  Sum_probs=32.0

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSC-CCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            45667777777777777777777777777777777 667777665

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.60  E-value=1.1e-15  Score=61.25  Aligned_cols=44  Identities=23%  Similarity=0.301  Sum_probs=31.7

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|++ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG-VKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSS-CCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            45567777777777777777777777777777777 666777665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=1e-15  Score=61.37  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=28.9

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG-EKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGS-CCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            34566666666776677666666666666666666 556666654

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=8e-16  Score=61.11  Aligned_cols=43  Identities=23%  Similarity=0.291  Sum_probs=27.9

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE-EKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTS-SCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            3456666666666666666666666666666666 556666654

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=1e-15  Score=61.33  Aligned_cols=44  Identities=25%  Similarity=0.347  Sum_probs=30.5

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|++ ++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSS-CCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            45566777777777777777777777777777777 666776654

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.60  E-value=1.2e-15  Score=61.15  Aligned_cols=44  Identities=20%  Similarity=0.438  Sum_probs=29.5

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGC-CCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            44566667777777777777777777777777766 566666654

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.60  E-value=4.7e-16  Score=61.19  Aligned_cols=40  Identities=18%  Similarity=0.273  Sum_probs=24.6

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            2 SSGSSG-ENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CSSSSS-CCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCC-CCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            345555 5556666666666666666666666666666665

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=5.6e-16  Score=60.94  Aligned_cols=40  Identities=18%  Similarity=0.274  Sum_probs=29.0

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +++|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            2 SSGSSG-EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSSSCS-CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCcCC-CCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            455666 6667777777777777777777777777777776

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.60  E-value=8.9e-16  Score=61.50  Aligned_cols=44  Identities=20%  Similarity=0.316  Sum_probs=27.3

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSS-SSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCC-CCCcCCCCC
Confidence            34556666666666666666666666666666666 555666554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=8.2e-16  Score=61.59  Aligned_cols=44  Identities=20%  Similarity=0.323  Sum_probs=28.7

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSC-CCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            44566666666666666666666666666666666 556666654

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=8.9e-16  Score=61.47  Aligned_cols=44  Identities=20%  Similarity=0.383  Sum_probs=29.9

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG-VKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSC-CCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            44566677777777777777777777777777776 666766654

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.60  E-value=1.3e-15  Score=61.05  Aligned_cols=44  Identities=20%  Similarity=0.253  Sum_probs=31.9

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR-EKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCC-SSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            45667777777777777777777777777777777 666777665

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=1.4e-15  Score=60.88  Aligned_cols=44  Identities=16%  Similarity=0.269  Sum_probs=31.2

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTT-CCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            44567777777777777777777777777777777 666777655

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=5.4e-16  Score=62.17  Aligned_cols=41  Identities=24%  Similarity=0.270  Sum_probs=23.3

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            3 SGSSGTG-QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             SCCCCCC-SSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CccccCC-CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3445555 4555555555555555555555555555555555

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.60  E-value=1.2e-15  Score=61.08  Aligned_cols=44  Identities=23%  Similarity=0.447  Sum_probs=31.5

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCC-CCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCC-CCCCCCCCC
Confidence            45567777777777777777777777777777777 666777665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=1.2e-15  Score=61.08  Aligned_cols=44  Identities=23%  Similarity=0.453  Sum_probs=31.9

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCC-CCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            45567777777777777777777777777777777 667777665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=4.3e-16  Score=61.28  Aligned_cols=41  Identities=22%  Similarity=0.312  Sum_probs=31.4

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |+++|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGG-EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCS-CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCC-CCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4566777 6678888888888888888888888888888776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=1.4e-15  Score=60.92  Aligned_cols=44  Identities=20%  Similarity=0.323  Sum_probs=30.0

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCC-SCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            34566677777777777777777777777777766 666776654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=9.7e-16  Score=61.36  Aligned_cols=44  Identities=18%  Similarity=0.424  Sum_probs=28.3

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCS-SSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCC-CCCCCCCCC
Confidence            34556666666666666666666666666666666 556666654

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=9e-16  Score=61.48  Aligned_cols=44  Identities=23%  Similarity=0.336  Sum_probs=26.3

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHC-CSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34456666666666666666666666666666666 555665544

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.59  E-value=7.3e-16  Score=61.79  Aligned_cols=41  Identities=20%  Similarity=0.301  Sum_probs=22.5

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            3 SGSSGTG-EKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCC-CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCC-CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3444555 4455555555555555555555555555555555

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=9e-16  Score=61.49  Aligned_cols=44  Identities=20%  Similarity=0.381  Sum_probs=27.6

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSS-SSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCC-CCCCCCCCC
Confidence            34556666666666666666666666666666666 556666554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.59  E-value=1.8e-15  Score=60.58  Aligned_cols=44  Identities=18%  Similarity=0.354  Sum_probs=30.0

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG-EKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTS-CCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            44566677777777777777777777777777776 666766654

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=1e-15  Score=61.30  Aligned_cols=44  Identities=20%  Similarity=0.377  Sum_probs=26.7

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTT-SCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34456666666666666666666666666666666 555666554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=5.8e-16  Score=60.93  Aligned_cols=41  Identities=24%  Similarity=0.371  Sum_probs=29.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |+++|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGG-EKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCS-SCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCC-CCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            4456666 6677777777777777777777777777777766

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=1.6e-15  Score=60.78  Aligned_cols=44  Identities=20%  Similarity=0.375  Sum_probs=28.6

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTT-CCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34566666666666666666666666666666666 556666654

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=1.2e-15  Score=61.13  Aligned_cols=44  Identities=18%  Similarity=0.271  Sum_probs=26.9

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|++ ++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTC-CCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34456666666666666666666666666666666 555666554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=1.4e-15  Score=60.91  Aligned_cols=44  Identities=18%  Similarity=0.273  Sum_probs=31.2

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|++ ++||.|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCC-SSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            45567777777777777777777777777777777 666777655

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=9.4e-16  Score=61.44  Aligned_cols=43  Identities=19%  Similarity=0.380  Sum_probs=24.6

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emh_A            4 GSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHC-SSCSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            4455555566666666666655556556555555 455555543

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.59  E-value=1.1e-15  Score=61.27  Aligned_cols=43  Identities=19%  Similarity=0.387  Sum_probs=23.3

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emk_A            4 GSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSS-CCCSSCCCC
T ss_pred             CCccCCCCceECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            3445555555555555555555555555555555 445555443

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=9.7e-16  Score=61.36  Aligned_cols=41  Identities=20%  Similarity=0.302  Sum_probs=22.1

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            3 SGSSGTG-EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCSS-CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             cccCCCC-CCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3444555 4455555555555555555555555555555554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.59  E-value=1.3e-15  Score=60.96  Aligned_cols=44  Identities=18%  Similarity=0.265  Sum_probs=27.4

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG-ENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT-SCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            34556666666666666666666666666666666 556666554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.2e-15  Score=61.11  Aligned_cols=44  Identities=20%  Similarity=0.412  Sum_probs=28.7

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTT-CSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            34566666666666666666666666666666666 556666654

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.7e-15  Score=60.70  Aligned_cols=44  Identities=23%  Similarity=0.328  Sum_probs=34.0

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +.++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG-ERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCS-CCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCC-CCCCCCCCC
Confidence            45677788888888888888888888888888877 677877765

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=6.7e-16  Score=60.78  Aligned_cols=41  Identities=20%  Similarity=0.362  Sum_probs=27.6

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGG-EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSS-SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCC-CCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3455666 5667777777777777777777777777777665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.6e-15  Score=60.74  Aligned_cols=44  Identities=18%  Similarity=0.363  Sum_probs=27.1

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +.++|+++++|.|..|++.|.....|..|+++|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG-YRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTC-CCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCC-CCCCCCCCC
Confidence            34556666666666666666666666666666666 555666554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1e-15  Score=61.30  Aligned_cols=44  Identities=20%  Similarity=0.381  Sum_probs=29.7

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSS-CCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCC-CCCCCCCCC
Confidence            44566677777777777777777777777777766 566766654

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=1.7e-15  Score=60.65  Aligned_cols=44  Identities=18%  Similarity=0.224  Sum_probs=30.5

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|++ ++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG-EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCC-SCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            44566777777777777777777777777777777 666776654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=8.4e-16  Score=61.56  Aligned_cols=41  Identities=20%  Similarity=0.336  Sum_probs=22.2

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|++ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            3 SGSSGTG-EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCSCC-CCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             ccCCCCC-CCCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            3444555 4455555555555555555555555555555554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.58  E-value=1.2e-15  Score=61.18  Aligned_cols=40  Identities=15%  Similarity=0.306  Sum_probs=20.4

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +++|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ely_A            4 GSSGTG-EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP   43 (46)
T ss_dssp             CCCCCC-CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSC
T ss_pred             CCCCCC-CCCcccCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            344444 4445555555555555555555555555555544

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=9.7e-16  Score=61.39  Aligned_cols=40  Identities=25%  Similarity=0.387  Sum_probs=20.1

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            4 GSSGTG-EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCC-CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CcCCCC-CcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            344444 4445555555555555555555555555555544

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=8.6e-16  Score=61.58  Aligned_cols=40  Identities=20%  Similarity=0.308  Sum_probs=21.0

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            4 GSSGSG-KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCSCCC-SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCcCC-CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            344444 4455555555555555555555555555555554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=9.3e-16  Score=61.45  Aligned_cols=40  Identities=20%  Similarity=0.310  Sum_probs=20.7

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|++ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            4 GSSGTG-GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCSSSS-SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             ccccCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            344444 4445555555555555555555555555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.1e-15  Score=61.20  Aligned_cols=41  Identities=22%  Similarity=0.408  Sum_probs=21.1

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            3 SGSSGSG-EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCC-SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             cccCCCC-CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            3344444 4445555555555555555555555555555554

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.58  E-value=8.6e-16  Score=60.40  Aligned_cols=40  Identities=18%  Similarity=0.201  Sum_probs=27.1

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 ~~~H~~-~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGG-ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCS-SCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCC-CCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            455666 5667777777777777777777777777777665

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.58  E-value=1.1e-15  Score=61.22  Aligned_cols=42  Identities=21%  Similarity=0.351  Sum_probs=39.3

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +|++.|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emk_A            2 SSGSSGTG-EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSS-SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCccCC-CCceECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            36788998 8899999999999999999999999999999998

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=9.5e-16  Score=61.45  Aligned_cols=41  Identities=17%  Similarity=0.284  Sum_probs=23.0

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            3 SGSSGTG-EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCS-CCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             cccccCC-CCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            3445555 4555555555555555555555555555555555

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=7.1e-16  Score=61.83  Aligned_cols=41  Identities=24%  Similarity=0.486  Sum_probs=20.8

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSC-CCCCSSC
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            3445555555555555555555555555555555 4445443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=8.9e-16  Score=61.49  Aligned_cols=41  Identities=24%  Similarity=0.466  Sum_probs=20.8

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emi_A            4 GSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG-EKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCS-CCCCSCC
T ss_pred             CcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCC-CCCCCCC
Confidence            3445555555555555555555555555555555 4444443

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1e-15  Score=61.32  Aligned_cols=40  Identities=25%  Similarity=0.431  Sum_probs=21.0

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            4 GSSGMG-EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CSCCCC-CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             ccccCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            344444 4445555555555555555555555555555554

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=9.9e-16  Score=60.77  Aligned_cols=41  Identities=17%  Similarity=0.246  Sum_probs=28.1

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTG-EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSC-CCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCC-CCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            4556666 6667777777777777777777777777777766

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=9.9e-16  Score=61.36  Aligned_cols=40  Identities=28%  Similarity=0.430  Sum_probs=19.3

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            4 GSSGTG-EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCSS-CCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCC-CcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            334444 4444555555555544445555555555554444

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=8.4e-16  Score=60.98  Aligned_cols=41  Identities=17%  Similarity=0.194  Sum_probs=28.3

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTG-MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSS-SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCC-CcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            4556666 6667777777777777777777777777777766

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=9.6e-16  Score=61.40  Aligned_cols=40  Identities=18%  Similarity=0.294  Sum_probs=19.6

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            4 GSSGTG-ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCCS-CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCC-CCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            344444 4445555555555555555555555555555544

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.5e-15  Score=60.80  Aligned_cols=43  Identities=26%  Similarity=0.386  Sum_probs=24.2

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ .+||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eov_A            4 GSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG-ERHSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSC-CSSCCSCCC
T ss_pred             CCCCCCCCCccCCccChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            4455555555555555555555555555555555 455555544

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.58  E-value=1.1e-15  Score=61.20  Aligned_cols=42  Identities=19%  Similarity=0.356  Sum_probs=39.3

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ema_A            2 SSGSSGTG-EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP   43 (46)
T ss_dssp             CSCSSCTT-SCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSS
T ss_pred             CCccCCCC-CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=8.8e-16  Score=61.51  Aligned_cols=43  Identities=19%  Similarity=0.398  Sum_probs=26.0

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTT-SCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            34556666666666666666666666666666666 55566554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=1.1e-15  Score=60.67  Aligned_cols=41  Identities=17%  Similarity=0.248  Sum_probs=38.2

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (44)
T 2emx_A            1 GSSGSSG-EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP   41 (44)
T ss_dssp             CCCCCSS-CCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSC
T ss_pred             CCCCcCC-CcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4677888 8899999999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.4e-15  Score=60.85  Aligned_cols=44  Identities=18%  Similarity=0.228  Sum_probs=27.6

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD-DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCS-CCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34556666666666666666666666666666666 556666554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.4e-15  Score=60.94  Aligned_cols=41  Identities=22%  Similarity=0.323  Sum_probs=24.5

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 h~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            3 SGSSGAG-KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCS-SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCC-CCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3445555 5556666666666666666666666666666655

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=1.8e-15  Score=60.58  Aligned_cols=44  Identities=20%  Similarity=0.261  Sum_probs=27.5

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|++ ++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMG-QKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSC-CSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34556666666666666666666666666666666 556666554

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.2e-15  Score=61.12  Aligned_cols=42  Identities=24%  Similarity=0.369  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytn_A            2 SSGSSGTG-KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSC-CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSC
T ss_pred             CCCcCCCC-CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCC
Confidence            36778999 8899999999999999999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.58  E-value=1.4e-15  Score=60.95  Aligned_cols=42  Identities=17%  Similarity=0.263  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|+++|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em0_A            2 SSGSSGMG-EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP   43 (46)
T ss_dssp             CCCCCSCC-CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCS
T ss_pred             CCcCccCC-CcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCC
Confidence            36788999 8899999999999999999999999999999998

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=1.2e-15  Score=61.18  Aligned_cols=42  Identities=19%  Similarity=0.329  Sum_probs=39.3

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoo_A            2 SSGSSGSG-ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP   43 (46)
T ss_dssp             CCCCCCSC-CCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCC
T ss_pred             CCCCCCCC-CCCEEccccCcccCCHHHHHHHHHHHcCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.58  E-value=8.9e-16  Score=61.52  Aligned_cols=41  Identities=20%  Similarity=0.427  Sum_probs=21.3

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            3 SGSSGTG-EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             SCCCCSS-CCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             ccccCCC-CCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            3444444 4445555555555555555555555555555554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.3e-15  Score=60.98  Aligned_cols=41  Identities=20%  Similarity=0.297  Sum_probs=22.6

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            3 SGSSGTG-EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSSSSSC-CCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCcCcCC-CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            3444555 4455555555555555555555555555555555

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.1e-15  Score=61.26  Aligned_cols=40  Identities=25%  Similarity=0.392  Sum_probs=20.3

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            4 GSSGTG-EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSC-CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CcCCCC-CcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            344444 4445555555555555555555555555555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=9.5e-16  Score=61.44  Aligned_cols=41  Identities=20%  Similarity=0.309  Sum_probs=38.8

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emf_A            3 SGSSGTG-GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCSSSSS-SCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCC
T ss_pred             cccccCC-CCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            6778988 8899999999999999999999999999999998

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.2e-15  Score=61.10  Aligned_cols=42  Identities=19%  Similarity=0.337  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|+++|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emh_A            2 SSGSSGTG-ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCSC-CCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSS
T ss_pred             CCCCCCCC-CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            36788998 8899999999999999999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.7e-15  Score=60.66  Aligned_cols=41  Identities=15%  Similarity=0.299  Sum_probs=38.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2elz_A            3 SGSSGSV-EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP   43 (46)
T ss_dssp             CCSCCCC-CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCS
T ss_pred             CCCCCCC-CCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            6778998 8899999999999999999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=9.5e-16  Score=61.41  Aligned_cols=43  Identities=21%  Similarity=0.431  Sum_probs=23.1

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG-GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHS-CCCSCSCCC
T ss_pred             CcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            3445555555555555555555555555555555 445555443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.3e-15  Score=61.00  Aligned_cols=42  Identities=24%  Similarity=0.255  Sum_probs=39.3

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emp_A            2 SSGSSGTG-VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSC-CCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSC
T ss_pred             CcccccCC-CcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.6e-15  Score=60.82  Aligned_cols=43  Identities=23%  Similarity=0.381  Sum_probs=24.1

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      .++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG-QRPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHS-CCCCCCCCC
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            3455555555555555555555555555555555 455555544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=2.3e-15  Score=60.24  Aligned_cols=42  Identities=24%  Similarity=0.367  Sum_probs=39.3

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ep3_A            2 SSGSSGTG-EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSC-CCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCT
T ss_pred             CCCCCCCC-CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.3e-15  Score=61.06  Aligned_cols=42  Identities=19%  Similarity=0.300  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emy_A            2 SSGSSGTG-ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP   43 (46)
T ss_dssp             CCCCCCCS-SCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCS
T ss_pred             CCCCCCCC-CcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCC
Confidence            36788998 8899999999999999999999999999999998

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=1e-15  Score=60.78  Aligned_cols=41  Identities=17%  Similarity=0.259  Sum_probs=28.8

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAG-ENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSC-CCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCC-CCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            4556666 6667777777777777777777777777777766

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.1e-15  Score=61.21  Aligned_cols=41  Identities=22%  Similarity=0.460  Sum_probs=22.2

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~p~~C~   44 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG-EKPSGPS   44 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSS-CCSSCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHHhcCC-CCCcCCC
Confidence            3445555555555555555555555555555555 4455543

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.3e-15  Score=61.06  Aligned_cols=42  Identities=21%  Similarity=0.385  Sum_probs=39.3

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eml_A            2 SSGSSGTG-EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP   43 (46)
T ss_dssp             CCCCCCSS-CCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCS
T ss_pred             CccCCcCC-CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.1e-15  Score=61.23  Aligned_cols=41  Identities=17%  Similarity=0.402  Sum_probs=21.3

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG-ERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTS-CCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCC-CCCCCCC
Confidence            3445555555555555555555555555555555 4445543

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.57  E-value=1.1e-15  Score=61.30  Aligned_cols=45  Identities=18%  Similarity=0.344  Sum_probs=41.6

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC-CSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            356789999999999999999999999999999999 889999876

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.4e-15  Score=60.96  Aligned_cols=41  Identities=17%  Similarity=0.395  Sum_probs=28.4

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            3 SGSSGSG-ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCSCSSC-CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCcCCCC-CCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4556666 6667777777777777777777777777777766

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.4e-15  Score=60.96  Aligned_cols=41  Identities=20%  Similarity=0.285  Sum_probs=38.8

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epz_A            3 SGSSGTG-EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCC-CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSS
T ss_pred             CCCCcCC-CCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCC
Confidence            6778998 8899999999999999999999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=2.2e-15  Score=60.33  Aligned_cols=43  Identities=23%  Similarity=0.374  Sum_probs=27.7

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG-EKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHC-CCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            4556666666666666666666666666666666 556666554

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.1e-15  Score=61.18  Aligned_cols=40  Identities=25%  Similarity=0.400  Sum_probs=19.4

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            4 GSSGTG-EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCC-SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             ccccCC-CCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            344444 4445555555555555555555555555555444

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.57  E-value=2.6e-15  Score=66.87  Aligned_cols=63  Identities=24%  Similarity=0.438  Sum_probs=57.7

Q ss_pred             chhhhhhhccCCCceecCC--chhhcCCHHHHHHHhhcccCCCCCcccCC---CcccccChhHHHHHHhhhh
Q psy12014          4 TPKLIDSLYKGGGLFSCSD--CSRVYKKKASLTRHQTYECGQQPKYRCPL---CSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus         4 ~~~~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~c~~---c~~~f~~~~~l~~h~~~~~   70 (78)
                      .+..+.++|+++++|.|..  |++.|.....|..|++.|.+    +.|..   |++.|.....|..|+++|+
T Consensus        18 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           18 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            3566788999999999988  99999999999999999987    89999   9999999999999998874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.1e-15  Score=61.24  Aligned_cols=41  Identities=27%  Similarity=0.468  Sum_probs=21.3

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG-EKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCS-SSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            3445555555555555555555555555555555 4445543

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.4e-15  Score=60.90  Aligned_cols=42  Identities=19%  Similarity=0.301  Sum_probs=39.3

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytj_A            2 SSGSSGTG-EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP   43 (46)
T ss_dssp             CSSCTTSS-CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSC
T ss_pred             CcccCCCC-CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=8.6e-16  Score=60.98  Aligned_cols=41  Identities=17%  Similarity=0.228  Sum_probs=25.5

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |+++|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTG-ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSS-CCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCC-CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            4455555 5556666666666666666666666666666665

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.5e-15  Score=60.86  Aligned_cols=42  Identities=19%  Similarity=0.407  Sum_probs=22.9

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2em2_A            4 GSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCC-CCSSCSSC
T ss_pred             CCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            3445555555555555555555555555555555 44555543

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.3e-15  Score=60.97  Aligned_cols=42  Identities=21%  Similarity=0.387  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep2_A            2 SSGSSGTG-EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP   43 (46)
T ss_dssp             CSSSCSSC-CCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCS
T ss_pred             CCCCCCCC-CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.6e-15  Score=60.72  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=38.8

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytd_A            3 SGSSGSG-EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP   43 (46)
T ss_dssp             CCCCSCC-CCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCS
T ss_pred             CccccCC-CcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCC
Confidence            6778998 8899999999999999999999999999999998

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.6e-15  Score=60.73  Aligned_cols=42  Identities=21%  Similarity=0.277  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emm_A            2 SSGSSGTG-ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSC-CCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSS
T ss_pred             CCcCCcCC-CCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.3e-15  Score=61.01  Aligned_cols=41  Identities=12%  Similarity=0.243  Sum_probs=29.1

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |+++|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTG-EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCC-CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCC-CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4556666 6667777777777777777777777777777766

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.7e-15  Score=60.67  Aligned_cols=42  Identities=14%  Similarity=0.319  Sum_probs=39.1

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoq_A            2 SSGSSGTG-EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP   43 (46)
T ss_dssp             CCCCCSSS-SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSC
T ss_pred             CCCCCCCC-CCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            36778888 8899999999999999999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.3e-15  Score=60.99  Aligned_cols=42  Identities=21%  Similarity=0.336  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2yu8_A            2 SSGSSGTG-EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP   43 (46)
T ss_dssp             CCCCCCCC-CSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCS
T ss_pred             CcCcCCCC-CCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            36778999 8899999999999999999999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.6e-15  Score=60.74  Aligned_cols=42  Identities=14%  Similarity=0.177  Sum_probs=39.1

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eop_A            2 SSGSSGTG-EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCSCCC-CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCC
T ss_pred             CCccccCC-CCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            36778998 8899999999999999999999999999999998

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.5e-15  Score=60.84  Aligned_cols=42  Identities=26%  Similarity=0.392  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytk_A            2 SSGSSGSG-EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSS-SCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSC
T ss_pred             CCcccCCC-CCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCC
Confidence            36778998 8899999999999999999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.57  E-value=1.2e-15  Score=61.04  Aligned_cols=42  Identities=19%  Similarity=0.222  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2el4_A            2 SSGSSGTG-VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP   43 (46)
T ss_dssp             CCCCCSCC-CCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCC
T ss_pred             ccccCCCC-CCceECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            36778999 8899999999999999999999999999999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.4e-15  Score=60.85  Aligned_cols=42  Identities=17%  Similarity=0.241  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eq4_A            2 SSGSSGTG-EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSSC-CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCC
T ss_pred             CCcccCCC-CCCeECCCCCCccCchHHHHHHHHhcCCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.2e-15  Score=61.08  Aligned_cols=41  Identities=27%  Similarity=0.511  Sum_probs=20.8

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSS-CCSSCSC
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            3445555555555555555555555555555554 4445443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.57  E-value=1.4e-16  Score=65.94  Aligned_cols=51  Identities=22%  Similarity=0.410  Sum_probs=42.1

Q ss_pred             hhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCcccc
Q psy12014         25 RVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGK   76 (78)
Q Consensus        25 ~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~   76 (78)
                      +.|.....|..|++.|++ ++||.|..|++.|.....|..|+++|+|++||.
T Consensus         4 k~~~~~~~l~~h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQS-EQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTS-SCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhcCC-CCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            445555566778888888 788999999999999999999999999998874

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.5e-15  Score=60.83  Aligned_cols=42  Identities=24%  Similarity=0.350  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ .+||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoe_A            2 SSGSSGTG-EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP   43 (46)
T ss_dssp             CCSSCCCC-CCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSS
T ss_pred             CCCCCCCC-CCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            36778999 8899999999999999999999999999999998

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.3e-15  Score=65.90  Aligned_cols=52  Identities=17%  Similarity=0.331  Sum_probs=47.4

Q ss_pred             hhhhhh-hccCCCceecCC--chhhcCCHHHHHHHhhcccCCCCCcccCCCccccc
Q psy12014          5 PKLIDS-LYKGGGLFSCSD--CSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAK   57 (78)
Q Consensus         5 ~~~~~~-~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~   57 (78)
                      +..+.+ .|+++++|.|..  |++.|.....|..|+++|.+ ++||.|..|++.|.
T Consensus        25 L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           25 LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD-TRDYICEFSGPSSG   79 (79)
T ss_dssp             HHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHT-SCCCSCCSSSCCCC
T ss_pred             HHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCC-CCCeeCCCCCCCCC
Confidence            556666 799999999999  99999999999999999999 88999999999884

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=1.5e-15  Score=60.87  Aligned_cols=40  Identities=20%  Similarity=0.370  Sum_probs=21.6

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            4 GSSGTG-EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCC-SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCcCC-CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            344454 4455555555555555555555555555555554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=1.4e-15  Score=60.38  Aligned_cols=41  Identities=17%  Similarity=0.259  Sum_probs=24.5

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHT-RKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCC-CSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            4445555 5556666666666666666666666666666655

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=1.9e-15  Score=60.01  Aligned_cols=41  Identities=12%  Similarity=0.150  Sum_probs=30.4

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 h~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAA-KTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSS-SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCC-CcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            4456666 6677777777777777777777777777777776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=2.1e-15  Score=60.45  Aligned_cols=41  Identities=15%  Similarity=0.263  Sum_probs=38.6

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytm_A            3 SGSSGTG-EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP   43 (46)
T ss_dssp             SCCCCSS-CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCC
T ss_pred             CCcCCCC-CCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            5678888 8899999999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=1.7e-15  Score=60.69  Aligned_cols=41  Identities=20%  Similarity=0.286  Sum_probs=38.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em7_A            3 SGSSGTG-EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSC-CCSEECSSSCCEESCHHHHHHHGGGGTTCCCSST
T ss_pred             CCCCCCC-CcCccCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            6778888 8899999999999999999999999999999998

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=1.7e-15  Score=60.66  Aligned_cols=41  Identities=22%  Similarity=0.304  Sum_probs=38.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytq_A            3 SGSSGAG-EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP   43 (46)
T ss_dssp             CSSCSSC-CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCC
T ss_pred             CCcCcCC-CCCcCCCccChhhCChHHHHHHHHHhCCCCCCCC
Confidence            6778898 8899999999999999999999999999999998

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=3.6e-15  Score=59.88  Aligned_cols=44  Identities=23%  Similarity=0.406  Sum_probs=29.3

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhh-cccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQT-YECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~~~c~~c   52 (78)
                      +.++|+++++|.|..|++.|.....|..|++ .|.+ ++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~-~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG-EKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT-SCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCC-CCCCCCCCC
Confidence            3456666777777777777777777777766 6666 566666654

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=2.3e-15  Score=60.26  Aligned_cols=42  Identities=17%  Similarity=0.267  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eov_A            2 SSGSSGTG-EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSS-CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCC-CCCccCCccChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            36788988 8899999999999999999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.56  E-value=1.9e-15  Score=60.49  Aligned_cols=41  Identities=17%  Similarity=0.264  Sum_probs=38.8

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em9_A            3 SGSSGTG-EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP   43 (46)
T ss_dssp             SCCSCCC-CCSEECSSSCCEESSHHHHHHHGGGGTSCCCCST
T ss_pred             CCCCCCC-CcCeECCccccccCChHHHHHHHHHhCCCCCCCC
Confidence            6788999 8899999999999999999999999999999998

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=1.3e-15  Score=61.02  Aligned_cols=41  Identities=20%  Similarity=0.327  Sum_probs=38.8

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ene_A            3 SGSSGTG-EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCC-SSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSC
T ss_pred             cccCCCC-CCCeECCCCCchhCChHHHHHHHhhcCCCCCCCC
Confidence            6778999 8899999999999999999999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=1.2e-15  Score=61.06  Aligned_cols=43  Identities=26%  Similarity=0.461  Sum_probs=24.7

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytg_A            4 GSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSS-CCSSCSCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            4455555666666666666655556566555555 555555544

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=1.4e-15  Score=60.96  Aligned_cols=41  Identities=22%  Similarity=0.383  Sum_probs=38.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq0_A            3 SGSSGTG-EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP   43 (46)
T ss_dssp             CCCCTTC-CCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCC
T ss_pred             CCcCCCC-CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            6778888 8899999999999999999999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=2e-15  Score=60.40  Aligned_cols=42  Identities=21%  Similarity=0.330  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|+++|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytr_A            2 SSGSSGTG-EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSCCCSS-CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCS
T ss_pred             CCCcCCCC-CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=1.8e-15  Score=60.57  Aligned_cols=42  Identities=17%  Similarity=0.185  Sum_probs=39.1

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epw_A            2 SSGSSGTG-EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP   43 (46)
T ss_dssp             CCCCCCCC-CCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCC
T ss_pred             cCcccCCC-CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            36778998 8899999999999999999999999999999998

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=2.2e-15  Score=60.31  Aligned_cols=41  Identities=15%  Similarity=0.142  Sum_probs=38.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yso_A            3 SGSSGSR-EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGP   43 (46)
T ss_dssp             CSCCSSC-CCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCT
T ss_pred             cccccCC-CCCEEccccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            6778898 8899999999999999999999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=1.6e-15  Score=60.68  Aligned_cols=42  Identities=14%  Similarity=0.142  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en8_A            2 SSGSSGSG-EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP   43 (46)
T ss_dssp             CCCCCCCC-CSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCC
T ss_pred             CccccCCC-CCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            36778998 8899999999999999999999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=2.5e-15  Score=60.14  Aligned_cols=42  Identities=19%  Similarity=0.279  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eme_A            2 SSGSSGSG-EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCTTCC-CCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSS
T ss_pred             CCCCCCCC-CCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            36778999 8899999999999999999999999999999998

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=2.3e-15  Score=60.28  Aligned_cols=41  Identities=12%  Similarity=0.196  Sum_probs=38.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2enc_A            3 SGSSGSG-EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP   43 (46)
T ss_dssp             CSSCCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSS
T ss_pred             CCCCCCC-CCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCC
Confidence            5678898 8899999999999999999999999999999998

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.55  E-value=2.7e-15  Score=60.10  Aligned_cols=41  Identities=20%  Similarity=0.364  Sum_probs=38.6

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2el6_A            3 SGSSGAG-VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP   43 (46)
T ss_dssp             SCCSSCC-CCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSC
T ss_pred             CCCCCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            5678888 8899999999999999999999999999999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=2.5e-15  Score=60.15  Aligned_cols=42  Identities=19%  Similarity=0.368  Sum_probs=39.3

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en1_A            2 SSGSSGSG-EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CSTTCCCC-CCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCC
T ss_pred             CcccCCCC-CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            36788999 8899999999999999999999999999999998

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=1.3e-15  Score=60.51  Aligned_cols=41  Identities=22%  Similarity=0.307  Sum_probs=32.4

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTD-SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCC-CCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCC-CCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            5566777 6778888888888888888888888888888877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=2e-15  Score=60.50  Aligned_cols=42  Identities=19%  Similarity=0.221  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em5_A            2 SSGSSGSS-TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCC-SCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSC
T ss_pred             CCcCCCCC-CCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            36778998 8899999999999999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.55  E-value=4.2e-15  Score=59.25  Aligned_cols=43  Identities=23%  Similarity=0.341  Sum_probs=36.3

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCc
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCS   53 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~   53 (78)
                      ..|+++++|.|..|++.|.....|..|++.|++ +++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG-SVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSC-CCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccC-CCCCCCcCCC
Confidence            467888888888888888888888888888888 7788888875

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=1.5e-15  Score=60.76  Aligned_cols=40  Identities=25%  Similarity=0.478  Sum_probs=19.7

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCccc
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRC   49 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c   49 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ .+||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   43 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG-KKPSGP   43 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCC-CCCCCS
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCC-CCCCCC
Confidence            3344455555555555555555555555555544 444444

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=1.7e-15  Score=60.69  Aligned_cols=42  Identities=21%  Similarity=0.424  Sum_probs=39.1

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytg_A            2 SSGSSGTG-EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSS-CCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCS
T ss_pred             CCCCCCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            36778888 8899999999999999999999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=3.1e-15  Score=59.91  Aligned_cols=41  Identities=22%  Similarity=0.429  Sum_probs=38.5

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em8_A            3 SGSSGSG-EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP   43 (46)
T ss_dssp             CCCCCCS-CCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCS
T ss_pred             CCCCCCC-CCCeECcccCchhCCHHHHHHHHHHHcCCCCCCC
Confidence            5678888 8899999999999999999999999999999998

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=3.1e-15  Score=59.41  Aligned_cols=41  Identities=17%  Similarity=0.146  Sum_probs=28.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|++ ++||.|..|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSG-EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCC-CCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCC-CcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            4556666 6667777777777777777777777777777765

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=7.2e-15  Score=58.79  Aligned_cols=43  Identities=23%  Similarity=0.339  Sum_probs=32.8

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSS-SCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            4567777888888888888887788888777777 667777765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=6.1e-15  Score=59.02  Aligned_cols=41  Identities=24%  Similarity=0.487  Sum_probs=38.8

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em2_A            3 SGSSGSG-EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCC-CCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCS
T ss_pred             CCCCCCC-CCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            6778998 8899999999999999999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=2.3e-15  Score=60.25  Aligned_cols=41  Identities=22%  Similarity=0.297  Sum_probs=38.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |+++|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 h~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en6_A            3 SGSSGSG-EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCS-SCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSS
T ss_pred             CCCccCC-CcCeECCCCCcccCchHHHHHHHHHcCCCCCCCC
Confidence            6778999 8899999999999999999999999999999998

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.54  E-value=1e-14  Score=58.90  Aligned_cols=44  Identities=20%  Similarity=0.366  Sum_probs=39.2

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      ..++++++|.|..|++.|.....|..|+++|.+ ++||.|..|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSG-EKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCS-CCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCC-CCCccCCCCCC
Confidence            357788999999999999999999999999999 88899999975

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=2.4e-15  Score=60.24  Aligned_cols=41  Identities=20%  Similarity=0.227  Sum_probs=30.0

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhc-CccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH-KKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g-~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++ ++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            3 SGSSGQK-EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCC-SCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CccccCC-CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            4566666 6677777777777777777777777777 777776

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=4.3e-15  Score=59.66  Aligned_cols=41  Identities=20%  Similarity=0.249  Sum_probs=38.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHh-hhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMA-IRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|++ +|++++||+|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C   44 (47)
T 2epx_A            3 SGSSGTG-KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP   44 (47)
T ss_dssp             CCCCCCC-CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSC
T ss_pred             cccccCC-CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCC
Confidence            6778999 889999999999999999999999 9999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=2.2e-15  Score=60.31  Aligned_cols=41  Identities=17%  Similarity=0.366  Sum_probs=38.7

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ysp_A            3 SGSSGTG-EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP   43 (46)
T ss_dssp             CCCCCSS-CCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCC
T ss_pred             CCcCCCC-CCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCC
Confidence            6778888 8899999999999999999999999999999998

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=7.6e-16  Score=72.24  Aligned_cols=69  Identities=16%  Similarity=0.145  Sum_probs=58.8

Q ss_pred             hhhhhhh--ccCCCcee-cCCchhhc--CCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014          5 PKLIDSL--YKGGGLFS-CSDCSRVY--KKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus         5 ~~~~~~~--~~~~~~~~-c~~c~~~f--~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      +..+++.  +.+++++. |..|++.|  .....|..|++.|.+ ++||.|..|++.|.....|..|+++|+....
T Consensus        35 L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           35 LTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA-QKVLKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             HHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             HHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCC-CcceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            4556666  67777655 99999998  888889999999999 8899999999999999999999999876543

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=4e-15  Score=59.59  Aligned_cols=42  Identities=19%  Similarity=0.282  Sum_probs=22.9

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR-EKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHH-CCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            445555555555555555555555555555555 445555543

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=8.1e-15  Score=58.63  Aligned_cols=44  Identities=25%  Similarity=0.378  Sum_probs=40.3

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCC-CCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            456789999999999999999999999999999999 88899874

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=1.1e-14  Score=58.35  Aligned_cols=39  Identities=21%  Similarity=0.215  Sum_probs=22.5

Q ss_pred             hcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         38 TYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        38 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         5 ~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            5 SSGHG-ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCC-CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCC-CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            34455 4555666666666666666666666666666555

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=9.5e-15  Score=57.10  Aligned_cols=37  Identities=30%  Similarity=0.354  Sum_probs=20.2

Q ss_pred             ccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         40 ECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        40 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         5 h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSG-QRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCC-CCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCC-CCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            444 4455555555555555555555555555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.52  E-value=1.7e-14  Score=56.62  Aligned_cols=41  Identities=24%  Similarity=0.505  Sum_probs=37.8

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   42 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAG-ESGPSSG   42 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCC-CCSCCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCC-CCCCCCC
Confidence            5689999999999999999999999999999999 8889874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.3e-14  Score=58.02  Aligned_cols=42  Identities=21%  Similarity=0.307  Sum_probs=39.3

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccCC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKIY   78 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~~   78 (78)
                      |++.|++ ++||.|..|++.|.....|..|+++|++++||+|.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTG-ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCC-CCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCC-CCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6778998 88999999999999999999999999999999983

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.3e-14  Score=58.04  Aligned_cols=44  Identities=20%  Similarity=0.362  Sum_probs=40.1

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT-CCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899864

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.52  E-value=1.6e-15  Score=64.46  Aligned_cols=53  Identities=13%  Similarity=0.334  Sum_probs=46.1

Q ss_pred             hhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHH
Q psy12014          6 KLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHL   62 (78)
Q Consensus         6 ~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l   62 (78)
                      ..+.++|++++||.|..|++.|.....|.   +.|.+ .+||.|..|++.|....++
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCccccCccc
Confidence            45678899999999999999999887775   78999 8899999999999877654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.52  E-value=8e-15  Score=61.91  Aligned_cols=34  Identities=12%  Similarity=0.236  Sum_probs=32.8

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++||.|..|++.|.....|..|+++|+|++||+|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C   35 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSC   35 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEEC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeEC
Confidence            6799999999999999999999999999999988

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.2e-14  Score=58.13  Aligned_cols=44  Identities=20%  Similarity=0.419  Sum_probs=40.1

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT-SSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899874

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.7e-14  Score=57.65  Aligned_cols=42  Identities=26%  Similarity=0.336  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|+++|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            2 SSGSSGTG-EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCS-CCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCC-CcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            36778998 8899999999999999999999999999999998

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.51  E-value=1.1e-14  Score=58.21  Aligned_cols=44  Identities=20%  Similarity=0.357  Sum_probs=40.1

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTT-SCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.1e-14  Score=58.21  Aligned_cols=44  Identities=23%  Similarity=0.364  Sum_probs=40.2

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|++ ++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG-EKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSS-SSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.6e-14  Score=57.81  Aligned_cols=41  Identities=17%  Similarity=0.411  Sum_probs=38.6

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            3 SGSSGTG-EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CSSSCSS-CCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCCC-CcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            5678888 8899999999999999999999999999999998

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.2e-14  Score=57.31  Aligned_cols=41  Identities=24%  Similarity=0.350  Sum_probs=38.8

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++.|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            3 SGSSGTG-ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCCSCSS-CCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCcccCC-CCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            6788998 8899999999999999999999999999999998

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.9e-14  Score=57.50  Aligned_cols=42  Identities=17%  Similarity=0.255  Sum_probs=39.1

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccCC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKIY   78 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~~   78 (78)
                      |++.|.+ .+||.|..|++.|.....|..|+++|++++||+|-
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTG-EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCC-CCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCC-CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6778888 88999999999999999999999999999999983

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.51  E-value=2.6e-14  Score=56.43  Aligned_cols=37  Identities=24%  Similarity=0.441  Sum_probs=21.1

Q ss_pred             ccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         40 ECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        40 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |++ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         5 h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            5 SSG-NGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             CSS-SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCC-CCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            444 4455555555555555555555555555555555

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.9e-14  Score=57.53  Aligned_cols=44  Identities=23%  Similarity=0.465  Sum_probs=40.0

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC-CCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.8e-14  Score=57.57  Aligned_cols=44  Identities=27%  Similarity=0.390  Sum_probs=40.1

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG-ENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS-SCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.4e-14  Score=57.91  Aligned_cols=44  Identities=20%  Similarity=0.424  Sum_probs=40.0

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSC-SCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2.1e-14  Score=57.40  Aligned_cols=43  Identities=28%  Similarity=0.440  Sum_probs=39.7

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG-ERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC-CCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            56789999999999999999999999999999999 88899864

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=2.1e-14  Score=56.86  Aligned_cols=43  Identities=16%  Similarity=0.259  Sum_probs=39.3

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      .+.++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAA-KSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCC-CCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCCC
Confidence            456789999999999999999999999999999999 8889874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.5e-14  Score=57.79  Aligned_cols=44  Identities=20%  Similarity=0.400  Sum_probs=40.1

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC-CSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.8e-14  Score=57.62  Aligned_cols=40  Identities=20%  Similarity=0.306  Sum_probs=37.4

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytt_A            4 GSSGEG-EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP   43 (46)
T ss_dssp             SSSCSC-CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSC
T ss_pred             CCCCCC-CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            467888 8899999999999999999999999999999998

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2.3e-14  Score=57.23  Aligned_cols=42  Identities=29%  Similarity=0.390  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            2 SSGSSGTG-EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCC-CCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCccCCCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            36778998 8899999999999999999999999999999998

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2e-14  Score=57.46  Aligned_cols=44  Identities=18%  Similarity=0.299  Sum_probs=40.0

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|++ ++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS-SCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2.3e-14  Score=57.31  Aligned_cols=43  Identities=16%  Similarity=0.349  Sum_probs=39.5

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      ++++|+++++|.|..|++.|.....|..|+++|++ ++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG-ERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS-CCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            56789999999999999999999999999999999 88899863

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2e-14  Score=57.42  Aligned_cols=43  Identities=19%  Similarity=0.380  Sum_probs=39.7

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHS-CCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCC-CCCCCCCC
Confidence            56789999999999999999999999999999999 88899874

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=8e-15  Score=58.42  Aligned_cols=40  Identities=25%  Similarity=0.497  Sum_probs=22.7

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      ++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG-EKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSS-CCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCC-CCCCCCC
Confidence            345555555565565555555555555555555 4555553

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.7e-14  Score=57.66  Aligned_cols=44  Identities=18%  Similarity=0.228  Sum_probs=40.1

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ-ETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSS-CCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899863

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.2e-14  Score=57.34  Aligned_cols=44  Identities=20%  Similarity=0.406  Sum_probs=39.9

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC-SCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.9e-14  Score=57.54  Aligned_cols=44  Identities=27%  Similarity=0.444  Sum_probs=40.1

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTS-SCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            356789999999999999999999999999999999 88899864

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.3e-14  Score=56.77  Aligned_cols=42  Identities=26%  Similarity=0.493  Sum_probs=38.8

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ .+||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG-QSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSS-SCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            56789999999999999999999999999999999 8889874

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.8e-14  Score=55.92  Aligned_cols=41  Identities=20%  Similarity=0.377  Sum_probs=37.6

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      +++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV-KSGPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSC-CSSCCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            5679999999999999999999999999999999 8888873

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.8e-14  Score=56.48  Aligned_cols=43  Identities=21%  Similarity=0.401  Sum_probs=39.1

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG-ESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTT-SSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCC-CCCCCCC
Confidence            356789999999999999999999999999999999 7889874

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=2.8e-14  Score=56.02  Aligned_cols=41  Identities=15%  Similarity=0.285  Sum_probs=37.8

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCccc
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRC   49 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c   49 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG-SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSC-CSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCC-CCCCCC
Confidence            46789999999999999999999999999999999 888876

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.9e-14  Score=56.48  Aligned_cols=41  Identities=17%  Similarity=0.279  Sum_probs=37.8

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCccc
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRC   49 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c   49 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHS-CCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCC-CCCCCC
Confidence            46789999999999999999999999999999999 888876

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.49  E-value=3.3e-14  Score=55.73  Aligned_cols=41  Identities=17%  Similarity=0.303  Sum_probs=37.8

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCccc
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRC   49 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c   49 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|++ ++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ-SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTC-CCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCC-CCCCCC
Confidence            46789999999999999999999999999999999 888876

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.5e-14  Score=56.61  Aligned_cols=43  Identities=19%  Similarity=0.342  Sum_probs=39.1

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG-ESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC-SSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCC-CCCCCCC
Confidence            356789999999999999999999999999999999 8889874

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=4.3e-14  Score=55.19  Aligned_cols=40  Identities=25%  Similarity=0.525  Sum_probs=36.9

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCccc
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRC   49 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c   49 (78)
                      .++|+++++|.|..|++.|.....|..|++.|.+ ++||.|
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   41 (41)
T 2ept_A            2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTG-SGPSSG   41 (41)
T ss_dssp             CSSCCCCCCEECSSSCCEESSHHHHHHHGGGCCC-CSCSCC
T ss_pred             CCccCCCCCeECCCCCCCcCCHHHHHHHHHHhCC-CCCcCC
Confidence            4678999999999999999999999999999999 888876

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.5e-14  Score=57.80  Aligned_cols=40  Identities=23%  Similarity=0.374  Sum_probs=37.4

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         4 ~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep0_A            4 GSSGTG-EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSTT-CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSC
T ss_pred             CCCCCC-CCCeeCcccCcccCChHHHHHHHHHhCCCCCCCC
Confidence            567888 8899999999999999999999999999999998

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.9e-14  Score=56.99  Aligned_cols=43  Identities=26%  Similarity=0.436  Sum_probs=39.5

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG-ERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC-CCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCC-CCCCCCC
Confidence            356789999999999999999999999999999999 8889986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=3.8e-14  Score=56.42  Aligned_cols=41  Identities=27%  Similarity=0.397  Sum_probs=37.6

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccCC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKIY   78 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~~   78 (78)
                      .+.|.+ ++||.|..|++.|.....|..|+++|++++||+|.
T Consensus         4 ~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTG-QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCS-CCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCC-CcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            456888 88999999999999999999999999999999983

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=5.2e-14  Score=56.61  Aligned_cols=44  Identities=20%  Similarity=0.339  Sum_probs=33.5

Q ss_pred             hhhhccCCCceecC--CchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014          8 IDSLYKGGGLFSCS--DCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus         8 ~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +.++|+++++|.|.  .|++.|.....|..|++.|.+ ++||.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG-VKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCC-CCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            34567788888887  788888888888888888877 677877765

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.48  E-value=1e-15  Score=68.90  Aligned_cols=66  Identities=15%  Similarity=0.146  Sum_probs=59.1

Q ss_pred             chhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014          4 TPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus         4 ~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      .+..+.++|+++++|.|..|++.|.....|..|+..|.+  .++.|..|++.|.....|..|++.+++
T Consensus        18 ~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           18 HLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC--CcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence            356778889999999999999999999999999998875  469999999999999999999987764

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=4.3e-14  Score=55.80  Aligned_cols=42  Identities=26%  Similarity=0.403  Sum_probs=38.3

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++|+++++|.|..|++.|.....|..|++.|++ ++||.|.+
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   43 (43)
T 2yrm_A            2 SSGSSGNGAFFCNECDCRFSEEASLKRHTLQTHS-DKSGPSSG   43 (43)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTC-TTCSSSCC
T ss_pred             CcCcCCCCCEECCCCCCeeCChHHHHHHHHhhCC-CCCccCCC
Confidence            3578999999999999999999999999999999 88899863

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.2e-14  Score=56.87  Aligned_cols=43  Identities=26%  Similarity=0.402  Sum_probs=39.3

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCC-SCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            45789999999999999999999999999999999 88899863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.1e-14  Score=56.29  Aligned_cols=41  Identities=20%  Similarity=0.376  Sum_probs=37.8

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCccc
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRC   49 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c   49 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSC-CSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCC-CCCCCC
Confidence            46789999999999999999999999999999999 788876

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.4e-14  Score=56.75  Aligned_cols=42  Identities=29%  Similarity=0.378  Sum_probs=39.2

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            2 SSGSSGTG-EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCCSSCC-CCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CcccCCCC-CCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            36778998 8899999999999999999999999999999998

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=3.6e-14  Score=56.18  Aligned_cols=43  Identities=23%  Similarity=0.400  Sum_probs=38.9

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      .++++|++++||.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR-KSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCC-CCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCC-CCCCCCC
Confidence            356789999999999999999999999999999999 8888873

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=5.4e-14  Score=55.70  Aligned_cols=42  Identities=17%  Similarity=0.357  Sum_probs=38.5

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAG-ESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTT-SCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCC-CCCCCCC
Confidence            46789999999999999999999999999999999 8889874

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.6e-14  Score=56.70  Aligned_cols=42  Identities=17%  Similarity=0.348  Sum_probs=39.1

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      ++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR-EKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH-TTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            56789999999999999999999999999999999 8889986

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=7.5e-14  Score=55.79  Aligned_cols=42  Identities=19%  Similarity=0.358  Sum_probs=38.7

Q ss_pred             hhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCC
Q psy12014          9 DSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPL   51 (78)
Q Consensus         9 ~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~   51 (78)
                      .++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSS-CCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCC-CCCCCCCC
Confidence            5678999999999999999999999999999999 88899863

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.9e-14  Score=56.99  Aligned_cols=43  Identities=19%  Similarity=0.196  Sum_probs=39.3

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|.+ ++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER-TDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHH-SCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            356789999999999999999999999999999999 7889886

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.1e-14  Score=56.86  Aligned_cols=42  Identities=19%  Similarity=0.355  Sum_probs=38.7

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCccc
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRC   49 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c   49 (78)
                      .+.++|+++++|.|..|++.|.....|..|+++|++ ++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR-KSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCC-CCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCC-CCCCCC
Confidence            456789999999999999999999999999999999 888887

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.5e-13  Score=54.38  Aligned_cols=42  Identities=19%  Similarity=0.325  Sum_probs=38.1

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCccc
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRC   49 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c   49 (78)
                      .++++|+++++|.|..|++.|.....|..|++.|++ ++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG-VSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSS-CSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcC-CCCCCC
Confidence            356789999999999999999999999999999999 777865

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=4e-14  Score=62.19  Aligned_cols=69  Identities=19%  Similarity=0.227  Sum_probs=59.8

Q ss_pred             CchhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccc
Q psy12014          3 TTPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLG   75 (78)
Q Consensus         3 ~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~   75 (78)
                      ..+..+.+.+.+++++.|..|++.|. ...|..|+ .+.+ .+|+.|..|++.|. ...|..|++++++++..
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~-~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~~~   71 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCG-ARTELCGNCGRNVL-VKDLKTHPEVCGREGSG   71 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHH-HCEEECSSSCCEEE-TTGGGTHHHHBTTBSSS
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcC-CCceEcccCCCcCc-HHHHHHHHHHccCCcCC
Confidence            34567778899999999999999995 88899999 8898 88999999999877 58899999999987654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2.4e-13  Score=54.27  Aligned_cols=43  Identities=16%  Similarity=0.252  Sum_probs=37.9

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      ++++|+++++|.|..|++.|.....|..|+++|.+..+||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5678999999999999999999999999999998734568875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.1e-13  Score=55.63  Aligned_cols=41  Identities=17%  Similarity=0.284  Sum_probs=37.4

Q ss_pred             HhhcccCCCCCcccC--CCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCP--LCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |.+.|++ ++||.|.  .|++.|.....|..|+++|++++||+|
T Consensus         3 ~~~~H~~-~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C   45 (48)
T 2ent_A            3 SGSSGTG-EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP   45 (48)
T ss_dssp             CCCSSCC-CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSS
T ss_pred             CCCCcCC-CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3467888 8899998  899999999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=3.5e-13  Score=53.53  Aligned_cols=39  Identities=23%  Similarity=0.412  Sum_probs=36.1

Q ss_pred             hcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         38 TYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        38 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ..|++ ++||.|..|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C   41 (45)
T 2epq_A            3 SGSSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG   41 (45)
T ss_dssp             CCCSS-CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCC-CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCC
Confidence            35777 8899999999999999999999999999999987

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.38  E-value=3.7e-13  Score=51.93  Aligned_cols=33  Identities=18%  Similarity=0.443  Sum_probs=16.2

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhhcCcccc
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGK   76 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~   76 (78)
                      ++||.|..|++.|.....|..|+++|+|++||.
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            334455555555555555555555555555443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.9e-13  Score=51.20  Aligned_cols=35  Identities=17%  Similarity=0.421  Sum_probs=21.8

Q ss_pred             cccCCCCCcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014         39 YECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        39 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      .|++ .+||.|..|++.|.....|..|+++|++++|
T Consensus         3 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSS-GRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCC-CCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCC-CCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            4555 5556666666666666666666666666654

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=5.8e-13  Score=53.60  Aligned_cols=38  Identities=16%  Similarity=0.196  Sum_probs=34.9

Q ss_pred             cccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         39 YECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        39 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+.. +++|.|..|++.|.....|..|+++|++++||+|
T Consensus         6 ~~~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (48)
T 2epr_A            6 SGRT-RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS   43 (48)
T ss_dssp             CCCC-CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCS
T ss_pred             CCCC-CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccC
Confidence            3556 7789999999999999999999999999999998

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.35  E-value=1.2e-12  Score=48.83  Aligned_cols=32  Identities=25%  Similarity=0.501  Sum_probs=27.4

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhcCcccc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGK   76 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~   76 (78)
                      +||.|..|++.|.....|..|+++|+|++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36888889999988888999998999888875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.34  E-value=8.8e-13  Score=54.32  Aligned_cols=43  Identities=16%  Similarity=0.126  Sum_probs=38.6

Q ss_pred             chhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCc
Q psy12014          4 TPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKY   47 (78)
Q Consensus         4 ~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~   47 (78)
                      .+..+.++|+++++|.|..|++.|.....|..|+++|++ ++||
T Consensus        11 ~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   53 (54)
T 1yui_A           11 GTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF-AKPG   53 (54)
T ss_dssp             CCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT-TSCC
T ss_pred             chhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc-CCCC
Confidence            355677899999999999999999999999999999999 7766

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.33  E-value=2.4e-14  Score=64.63  Aligned_cols=59  Identities=14%  Similarity=0.184  Sum_probs=49.3

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +.++|+++++|.|..|++.|.....|..|+++|++ ++||.|..|.    ....|..|.++|.|
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNE-EFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHH-HHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCC-CCCcccchhh----hHHHHHhhhccccc
Confidence            34678999999999999999999999999999999 8889988754    44556677788877

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.33  E-value=1.6e-12  Score=55.92  Aligned_cols=40  Identities=13%  Similarity=0.163  Sum_probs=26.3

Q ss_pred             hccCCCceecCC--chhhcCCHHHHHHHh-hcccCCCCCcccCC
Q psy12014         11 LYKGGGLFSCSD--CSRVYKKKASLTRHQ-TYECGQQPKYRCPL   51 (78)
Q Consensus        11 ~~~~~~~~~c~~--c~~~f~~~~~l~~h~-~~h~~~~~~~~c~~   51 (78)
                      .++|++||.|..  |+++|.....|..|+ ++|++ ++|+.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg-EKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS-DLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS-CCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCC-CCCccccc
Confidence            456677777754  777777777777775 46777 66666554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=2.6e-12  Score=56.31  Aligned_cols=45  Identities=13%  Similarity=0.323  Sum_probs=41.0

Q ss_pred             chhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCccc
Q psy12014          4 TPKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRC   49 (78)
Q Consensus         4 ~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c   49 (78)
                      .+..+++.|+++++|.|..|++.|.....|..|++.|.+ ++||.|
T Consensus        33 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~-~~p~~C   77 (77)
T 2cot_A           33 DLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG-SGPSSG   77 (77)
T ss_dssp             HHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCC-CCCCCC
T ss_pred             HHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCC-CCCCCC
Confidence            356778899999999999999999999999999999999 888876

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.32  E-value=2.4e-12  Score=49.56  Aligned_cols=37  Identities=16%  Similarity=0.234  Sum_probs=33.4

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCccc
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRC   49 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c   49 (78)
                      |+++++|.|..|++.|.....|..|++.|.+ ++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRR-DRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCC-SCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCC-Ccccee
Confidence            5789999999999999999999999999999 777765

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=9.7e-13  Score=60.19  Aligned_cols=50  Identities=18%  Similarity=0.193  Sum_probs=44.6

Q ss_pred             hcCCHHHHHHHhhcccCCCCCcccCCCcccc-cChhHHHHHHhhhhcCccccC
Q psy12014         26 VYKKKASLTRHQTYECGQQPKYRCPLCSYRA-KQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        26 ~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f-~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+.....+..|++.+.+ .+||.|..|++.| .....|..|+++| ++++|+|
T Consensus        15 ~~~~~~~~~~~~~~~~~-~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C   65 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVD-KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTC   65 (96)
T ss_dssp             SSCTTCHHHHHHHHHHH-TSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCC
T ss_pred             CCCCchHHHHHHHHhcC-CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeEC
Confidence            45556678888888888 8889999999999 9999999999999 9999988

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.31  E-value=2.2e-12  Score=48.42  Aligned_cols=31  Identities=26%  Similarity=0.460  Sum_probs=17.8

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      .+||.|..|++.|.....|..|+++|++++|
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            4455566666666555556666555555543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.31  E-value=2.7e-12  Score=55.22  Aligned_cols=38  Identities=18%  Similarity=0.174  Sum_probs=33.5

Q ss_pred             cccCCCCCcccCC--CcccccChhHHHHHH-hhhhcCccccC
Q psy12014         39 YECGQQPKYRCPL--CSYRAKQKIHLTTHM-AIRHHKKLGKI   77 (78)
Q Consensus        39 ~h~~~~~~~~c~~--c~~~f~~~~~l~~h~-~~~~g~k~~~~   77 (78)
                      ..++ ++||.|..  |+++|...++|..|+ ++|+|+|||-|
T Consensus        21 ~~sG-EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           21 RYSP-YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SSCS-SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cccC-CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            3567 88999975  999999999999997 68999999865

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=3e-13  Score=61.98  Aligned_cols=46  Identities=17%  Similarity=0.268  Sum_probs=41.9

Q ss_pred             HHHHHHhhcccCCCCCcccCCCccccc-ChhHHHHHHhhhhc-CccccC
Q psy12014         31 ASLTRHQTYECGQQPKYRCPLCSYRAK-QKIHLTTHMAIRHH-KKLGKI   77 (78)
Q Consensus        31 ~~l~~h~~~h~~~~~~~~c~~c~~~f~-~~~~l~~h~~~~~g-~k~~~~   77 (78)
                      ..+..|++.|.+ .++|.|..|++.|. ....|..|+++|++ +++|+|
T Consensus        10 ~~~~~h~~~h~~-~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C   57 (98)
T 2gqj_A           10 GPEEQWQRAIHE-RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKC   57 (98)
T ss_dssp             CSCSHHHHTTTT-TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSC
T ss_pred             CcHHHHHHHhcc-CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEEC
Confidence            345678999999 88899999999999 99999999999999 999988

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.29  E-value=3.7e-12  Score=47.83  Aligned_cols=30  Identities=13%  Similarity=0.378  Sum_probs=15.4

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            444555555555555555555555555544

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.28  E-value=2.1e-12  Score=49.10  Aligned_cols=33  Identities=21%  Similarity=0.350  Sum_probs=16.7

Q ss_pred             hcccCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014         38 TYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        38 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +.|.+ ++||.|..|++.|.....|..|+++|+|
T Consensus         4 ~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            4 RGSTG-IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             STTCC-SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CcCCC-CCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            34444 4445555555555555555555555544

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=2.9e-12  Score=48.68  Aligned_cols=35  Identities=17%  Similarity=0.353  Sum_probs=32.3

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhcccCCCC
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQP   45 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~   45 (78)
                      ++|+++++|.|..|++.|.....|..|++.|++ ++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~-~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP-EV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS-SC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC-CC
Confidence            578999999999999999999999999999988 54

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.25  E-value=9.8e-12  Score=46.62  Aligned_cols=34  Identities=24%  Similarity=0.349  Sum_probs=31.2

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccCCCC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQP   45 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~   45 (78)
                      +|+++++|.|..|++.|.....|..|++.|.+ .+
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~-~~   34 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTD-TL   34 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTS-CC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCC-CC
Confidence            47899999999999999999999999999988 54

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.24  E-value=9.5e-13  Score=59.39  Aligned_cols=41  Identities=17%  Similarity=0.369  Sum_probs=37.6

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +...|++ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus        16 ~~~~H~~-~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C   56 (88)
T 1x6f_A           16 GNGPRLQ-NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA   56 (88)
T ss_dssp             CCCSCCC-CSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             cccccCC-CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCccc
Confidence            3466888 8899999999999999999999999999999987

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=3.6e-12  Score=55.24  Aligned_cols=40  Identities=20%  Similarity=0.292  Sum_probs=37.0

Q ss_pred             hhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         37 QTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        37 ~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .++|.+ ++||.|..|++.|.....|..|+++|++++||+|
T Consensus         6 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C   45 (72)
T 1x6e_A            6 SGIHSG-EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKC   45 (72)
T ss_dssp             CCTTTT-CCCEECSSSCCEESSHHHHHHHHHGGGCSCCEEC
T ss_pred             CcccCC-CCCccCCCCCCccCCHHHHHHHHHhcCCCCCeEC
Confidence            456788 8899999999999999999999999999999988

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.23  E-value=1.2e-11  Score=46.33  Aligned_cols=34  Identities=18%  Similarity=0.303  Sum_probs=31.1

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccCCCC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQP   45 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~   45 (78)
                      +|+++++|.|..|++.|.....|..|++.|.+ ++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~-~k   34 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHG-AA   34 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSC-TT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcC-CC
Confidence            47899999999999999999999999999988 54

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=7.8e-12  Score=51.43  Aligned_cols=38  Identities=18%  Similarity=0.293  Sum_probs=34.5

Q ss_pred             cccCCCCCcccCCCcccccChhHHHHHHh-hhhcCccccC
Q psy12014         39 YECGQQPKYRCPLCSYRAKQKIHLTTHMA-IRHHKKLGKI   77 (78)
Q Consensus        39 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~g~k~~~~   77 (78)
                      .+.+ ++||.|..|++.|.....|..|++ +|++++||+|
T Consensus         6 ~~~~-~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C   44 (54)
T 2eps_A            6 SGSV-GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   44 (54)
T ss_dssp             CCCS-SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCC-CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccC
Confidence            3566 788999999999999999999997 9999999988

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=1e-11  Score=47.39  Aligned_cols=32  Identities=19%  Similarity=0.244  Sum_probs=21.8

Q ss_pred             CCCcccC--CCcccccChhHHHHHHhhhhcCccc
Q psy12014         44 QPKYRCP--LCSYRAKQKIHLTTHMAIRHHKKLG   75 (78)
Q Consensus        44 ~~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k~~   75 (78)
                      ++||.|.  .|++.|.....|..|+++|++++||
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5566776  4777777777777777777776665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.22  E-value=4.6e-13  Score=63.83  Aligned_cols=59  Identities=14%  Similarity=0.201  Sum_probs=49.0

Q ss_pred             CCceecCCchhhcC------CHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         15 GGLFSCSDCSRVYK------KKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        15 ~~~~~c~~c~~~f~------~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++.+.|+.|.+.|.      ....|..|+ .|.+ .+||.|..|++.|.....|..|+++|  ++||+|
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~-~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C  103 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKA-ISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVC  103 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHH-HCSEECTTTCCEESSHHHHHHHHHHT--CCCCBC
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCC-CCCeECCCCCcccCCHhHHHHHHHHC--CCCCCC
Confidence            45567777776665      567777777 5777 78899999999999999999999998  899987

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.22  E-value=5.5e-12  Score=56.55  Aligned_cols=39  Identities=15%  Similarity=0.220  Sum_probs=34.9

Q ss_pred             hcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         38 TYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        38 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ..+.. .+++.|..|++.|.....|..|+++|++++||+|
T Consensus        21 ~~~~~-~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C   59 (85)
T 2lv2_A           21 GLSAS-AECHLCPVCGESFASKGAQERHLRLLHAAQVFPC   59 (85)
T ss_dssp             SSCCC-CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEEC
T ss_pred             CCCCC-CCCEECCCCCCCcCcHHHHhhhhhhccCCCccCC
Confidence            34555 6679999999999999999999999999999998

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1.5e-11  Score=46.67  Aligned_cols=34  Identities=18%  Similarity=0.380  Sum_probs=20.7

Q ss_pred             cccCCCCCcccCCCcccccCh-hHHHHHHhhhhcCc
Q psy12014         39 YECGQQPKYRCPLCSYRAKQK-IHLTTHMAIRHHKK   73 (78)
Q Consensus        39 ~h~~~~~~~~c~~c~~~f~~~-~~l~~h~~~~~g~k   73 (78)
                      +|.+ .+||.|..|++.|... ..|..|+++|++++
T Consensus         3 ~h~~-~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSS-GRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCC-CCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCC-CCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            3455 5556666666666666 66666666666553

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.20  E-value=1.2e-11  Score=53.76  Aligned_cols=42  Identities=19%  Similarity=0.446  Sum_probs=38.3

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCc
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKY   47 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~   47 (78)
                      +..+.+.|+++++|.|..|++.|.....|..|++.|.+ ++||
T Consensus        33 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   74 (74)
T 2lce_A           33 LASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG-EKPY   74 (74)
T ss_dssp             HHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCC-SCCC
T ss_pred             HHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCC-CCCC
Confidence            56778899999999999999999999999999999999 7664

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.20  E-value=1.6e-11  Score=46.59  Aligned_cols=35  Identities=23%  Similarity=0.390  Sum_probs=32.3

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +.++|++++||.|..|++.|.....|..|++.|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            46789999999999999999999999999999876

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=2.8e-11  Score=45.57  Aligned_cols=29  Identities=31%  Similarity=0.687  Sum_probs=15.8

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      .+||.|..|++.|.....|..|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            44555555555555555555555555544

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.18  E-value=1.6e-11  Score=50.74  Aligned_cols=34  Identities=18%  Similarity=0.265  Sum_probs=30.2

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+||.|..|++.|.....|..|+++|++++||+|
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   35 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKC   35 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEEC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCC
Confidence            5689999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=7.5e-12  Score=57.84  Aligned_cols=48  Identities=15%  Similarity=0.319  Sum_probs=41.3

Q ss_pred             hhhhhh-hc---cCCCceecCCchhhcCCHHHHHHH-hhcccCCCCCcccCCCc
Q psy12014          5 PKLIDS-LY---KGGGLFSCSDCSRVYKKKASLTRH-QTYECGQQPKYRCPLCS   53 (78)
Q Consensus         5 ~~~~~~-~~---~~~~~~~c~~c~~~f~~~~~l~~h-~~~h~~~~~~~~c~~c~   53 (78)
                      +..+++ .|   ++++||.|..|++.|.....|..| +++|++ ++||.|.++.
T Consensus        34 L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htg-ekpy~C~~~~   86 (102)
T 2ghf_A           34 FTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG-EENFKLTMVK   86 (102)
T ss_dssp             HHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTT-CCCEEEEECC
T ss_pred             HHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCC-CCCeeCCccc
Confidence            455665 58   668999999999999999999999 899999 8899998753

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=3.9e-11  Score=45.14  Aligned_cols=33  Identities=18%  Similarity=0.305  Sum_probs=21.2

Q ss_pred             ccCCCCCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         40 ECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        40 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      |.+ .+||.|..|++.|.....|..|+++|++++
T Consensus         4 h~~-~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSS-GKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCC-CSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCC-CCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            444 556666666666666666666666666653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.3e-11  Score=45.89  Aligned_cols=31  Identities=26%  Similarity=0.471  Sum_probs=15.9

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |+++++|.|..|++.|.....|..|++.|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            4445555555555555555555555555443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.6e-11  Score=45.70  Aligned_cols=32  Identities=25%  Similarity=0.388  Sum_probs=17.0

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .|+++++|.|..|++.|.....|..|++.|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            34555555555555555555555555555544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=3.8e-11  Score=46.18  Aligned_cols=30  Identities=23%  Similarity=0.402  Sum_probs=14.3

Q ss_pred             cCCCceecCC--chhhcCCHHHHHHHhhcccC
Q psy12014         13 KGGGLFSCSD--CSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        13 ~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ++++||.|..  |++.|.....|..|+++|++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            4444455543  45555444444444444443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=3e-11  Score=51.95  Aligned_cols=38  Identities=24%  Similarity=0.311  Sum_probs=34.9

Q ss_pred             cccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         39 YECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        39 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+.+ ++||.|..|++.|.....|..|+++|+++++|+|
T Consensus         3 s~~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   40 (70)
T 1x5w_A            3 SGSS-GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKC   40 (70)
T ss_dssp             SCCC-CCSEECSSSSCEESSHHHHHHHHGGGCCSCSEEC
T ss_pred             CCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeC
Confidence            3566 7889999999999999999999999999999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.16  E-value=9.3e-13  Score=55.76  Aligned_cols=39  Identities=10%  Similarity=0.194  Sum_probs=34.9

Q ss_pred             HHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         35 RHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        35 ~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .|++.|.+ ++||.|..|++.|.....|.   ++|+|++||+|
T Consensus         4 ~h~~~H~~-~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C   42 (62)
T 1vd4_A            4 TDERDSTN-RASFKCPVCSSTFTDLEANQ---LFDPMTGTFRC   42 (62)
T ss_dssp             CCSSSCCS-SSEEECSSSCCEEEHHHHHH---HEETTTTEEBC
T ss_pred             hHHHHcCC-CCCccCCCCCchhccHHHhH---hhcCCCCCEEC
Confidence            47788999 88999999999999888876   88999999988

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=99.14  E-value=1.8e-12  Score=47.97  Aligned_cols=31  Identities=19%  Similarity=0.301  Sum_probs=26.0

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhcCccc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHHKKLG   75 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~   75 (78)
                      +||.|..|++.|.....|..|+++|++++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3688888888888888888888888888876

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=6e-11  Score=44.68  Aligned_cols=34  Identities=26%  Similarity=0.599  Sum_probs=30.8

Q ss_pred             cccCCCCCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         39 YECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        39 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      .|.+ .+||.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSS-GKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCC-CCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCC-CCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4677 789999999999999999999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=6e-11  Score=44.66  Aligned_cols=34  Identities=21%  Similarity=0.401  Sum_probs=30.7

Q ss_pred             cccCCCCCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         39 YECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        39 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      .|.+ .+||.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSS-GLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCC-CCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCC-CCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4667 788999999999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.3e-11  Score=45.79  Aligned_cols=32  Identities=28%  Similarity=0.425  Sum_probs=19.6

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHH-hhcccC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRH-QTYECG   42 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h-~~~h~~   42 (78)
                      +|++++||.|..|++.|.....|..| ++.|++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            45666666666666666666666666 555554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.6e-11  Score=46.10  Aligned_cols=34  Identities=21%  Similarity=0.374  Sum_probs=30.7

Q ss_pred             hcccCCCCCcccCCCcccccChhHHHHH-HhhhhcC
Q psy12014         38 TYECGQQPKYRCPLCSYRAKQKIHLTTH-MAIRHHK   72 (78)
Q Consensus        38 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~g~   72 (78)
                      +.|++ ++||.|..|++.|.....|..| +++|+++
T Consensus         2 ~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSS-GHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSS-SCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCC-CcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            46788 8899999999999999999999 8999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=4.8e-11  Score=45.87  Aligned_cols=33  Identities=21%  Similarity=0.527  Sum_probs=29.5

Q ss_pred             ccCCCCCcccCC--CcccccChhHHHHHHhhhhcCc
Q psy12014         40 ECGQQPKYRCPL--CSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        40 h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      +.+ ++||.|..  |+++|.....|..|+++|+|+.
T Consensus         4 ~~g-ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            4 GSS-GILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             SSC-CCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCC-CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            556 78999986  9999999999999999999863

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=6.5e-11  Score=44.58  Aligned_cols=29  Identities=24%  Similarity=0.450  Sum_probs=16.3

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      .+||.|..|++.|.....|..|+++|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            44555555555555555555555555554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=2.3e-11  Score=53.26  Aligned_cols=43  Identities=16%  Similarity=0.256  Sum_probs=37.8

Q ss_pred             HHHhhcccCCCCCcccCCCcccccChhHHHHHHh-hhhcC-ccccC
Q psy12014         34 TRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMA-IRHHK-KLGKI   77 (78)
Q Consensus        34 ~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~g~-k~~~~   77 (78)
                      ..|+++|.+ ++||.|..|++.|.....|..|++ .|.++ ++|+|
T Consensus         4 ~~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C   48 (77)
T 2ct1_A            4 GSSGRTHSG-EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHC   48 (77)
T ss_dssp             CCCCCCCSC-CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEEC
T ss_pred             CccccccCC-CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCC
Confidence            357889999 889999999999999999999997 67764 89887

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=4.7e-11  Score=52.33  Aligned_cols=37  Identities=19%  Similarity=0.348  Sum_probs=34.3

Q ss_pred             ccCCCCCcccCCCcccccChhHHHHHHhhhhc---CccccC
Q psy12014         40 ECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH---KKLGKI   77 (78)
Q Consensus        40 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g---~k~~~~   77 (78)
                      |++ ++||.|..|++.|.....|..|+++|++   +++|+|
T Consensus         2 h~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C   41 (78)
T 2d9h_A            2 SSG-SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPC   41 (78)
T ss_dssp             CCS-CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEEC
T ss_pred             CCC-CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCC
Confidence            667 7889999999999999999999999997   899987

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=6.2e-11  Score=45.15  Aligned_cols=35  Identities=17%  Similarity=0.386  Sum_probs=31.7

Q ss_pred             ccCCCceecC--CchhhcCCHHHHHHHhhcccCCCCCc
Q psy12014         12 YKGGGLFSCS--DCSRVYKKKASLTRHQTYECGQQPKY   47 (78)
Q Consensus        12 ~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~   47 (78)
                      |+++++|.|.  .|++.|.....|..|++.|++ ++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM-TLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHT-TTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCC-CCCC
Confidence            5789999999  599999999999999999999 6665

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=7e-11  Score=44.42  Aligned_cols=33  Identities=30%  Similarity=0.435  Sum_probs=30.7

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .+|+++++|.|..|++.|.....|..|++.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            368899999999999999999999999999887

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.2e-11  Score=45.39  Aligned_cols=33  Identities=27%  Similarity=0.404  Sum_probs=30.7

Q ss_pred             hhccCCCceecCCchhhcCCH-HHHHHHhhcccC
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKK-ASLTRHQTYECG   42 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~-~~l~~h~~~h~~   42 (78)
                      ++|+++++|.|..|++.|... ..|..|++.|++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            468999999999999999999 999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=6.8e-11  Score=53.48  Aligned_cols=45  Identities=18%  Similarity=0.189  Sum_probs=40.0

Q ss_pred             hhhhhhh-ccCCCc--------eecCCchhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014          5 PKLIDSL-YKGGGL--------FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus         5 ~~~~~~~-~~~~~~--------~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      +..+++. |+++++        |.|..|++.|.....|..|+++|++ ++||.|.
T Consensus        41 L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   94 (95)
T 2ej4_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG-EKSGPSS   94 (95)
T ss_dssp             HHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT-CCCCSSC
T ss_pred             HHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            4566776 999888        8999999999999999999999999 8889986

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=2.4e-11  Score=51.68  Aligned_cols=39  Identities=21%  Similarity=0.339  Sum_probs=35.3

Q ss_pred             hcccCCCCCcccCCCcccccChhHHHHHHhh-h-hcCccccC
Q psy12014         38 TYECGQQPKYRCPLCSYRAKQKIHLTTHMAI-R-HHKKLGKI   77 (78)
Q Consensus        38 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~-~-~g~k~~~~   77 (78)
                      +.|.+ ++||.|..|++.|.....|..|+++ | .+++||+|
T Consensus         3 ~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C   43 (66)
T 2drp_A            3 FTKEG-EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPC   43 (66)
T ss_dssp             CEEEE-TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEEC
T ss_pred             cccCC-CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeEC
Confidence            56788 8899999999999999999999998 6 58999987

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=2.1e-10  Score=50.90  Aligned_cols=51  Identities=16%  Similarity=0.339  Sum_probs=42.4

Q ss_pred             hhhhhhhccCC----CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccc
Q psy12014          5 PKLIDSLYKGG----GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRA   56 (78)
Q Consensus         5 ~~~~~~~~~~~----~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f   56 (78)
                      +..+.+.+.++    ++|.|..|++.|.....|..|++.|.+ .+++.|..|+..+
T Consensus        31 l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~~~~~~~~~~   85 (86)
T 1x6h_A           31 LDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG-PDGVEGENSGPSS   85 (86)
T ss_dssp             HHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCC-CCSCCCCCCCCCC
T ss_pred             HHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccC-CCCcccCCCCCCC
Confidence            44555554443    789999999999999999999999999 8889999998764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=99.10  E-value=7.8e-11  Score=47.32  Aligned_cols=34  Identities=18%  Similarity=0.401  Sum_probs=27.0

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhh-cccCCC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQT-YECGQQ   44 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~   44 (78)
                      +|+++++|.|..|++.|.....|..|++ .|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4778888889889888888888888888 888733

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=8.2e-11  Score=49.08  Aligned_cols=33  Identities=18%  Similarity=0.350  Sum_probs=31.2

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      +||.|..|++.|.....|..|+++|++++||+|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   33 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPC   33 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEEC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccC
Confidence            479999999999999999999999999999987

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.08  E-value=1e-10  Score=43.35  Aligned_cols=32  Identities=22%  Similarity=0.449  Sum_probs=29.2

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYR   48 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~   48 (78)
                      +||.|..|++.|.....|..|+++|++ ++|+.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHEL-LGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTT-TCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCC-CCCCC
Confidence            589999999999999999999999999 77764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=99.08  E-value=6.1e-11  Score=47.64  Aligned_cols=36  Identities=28%  Similarity=0.417  Sum_probs=29.1

Q ss_pred             cccCCCCCcccCCCcccccChhHHHHHHh-hhhcCccc
Q psy12014         39 YECGQQPKYRCPLCSYRAKQKIHLTTHMA-IRHHKKLG   75 (78)
Q Consensus        39 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~g~k~~   75 (78)
                      +|++ .+||.|..|++.|.....|..|++ +|+|+.+.
T Consensus         1 ~Ht~-~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDR-DKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTT-TSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCC-CcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            3677 789999999999999999999999 99987653

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.07  E-value=1.6e-10  Score=47.66  Aligned_cols=38  Identities=21%  Similarity=0.280  Sum_probs=35.3

Q ss_pred             hhhhhhhccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014          5 PKLIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +..+.++|+++++|.|..|++.|.....|..|++.|.+
T Consensus        17 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A           17 LKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             HHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             HHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            56778889999999999999999999999999999887

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=99.07  E-value=1.6e-10  Score=43.80  Aligned_cols=29  Identities=17%  Similarity=0.371  Sum_probs=16.3

Q ss_pred             CCCcccCC--CcccccChhHHHHHHhhhhcC
Q psy12014         44 QPKYRCPL--CSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        44 ~~~~~c~~--c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      .+||.|..  |++.|...+.|..|+++|+|+
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            44555552  555555555555555555554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=99.06  E-value=1.4e-10  Score=41.46  Aligned_cols=28  Identities=39%  Similarity=0.744  Sum_probs=20.5

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      ||.|..|++.|.....|..|+++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            5777777777777777777777777654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.6e-10  Score=43.37  Aligned_cols=32  Identities=22%  Similarity=0.443  Sum_probs=30.1

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .|+++++|.|..|++.|.....|..|++.|++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            57889999999999999999999999999987

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=99.05  E-value=2.2e-10  Score=40.79  Aligned_cols=29  Identities=24%  Similarity=0.474  Sum_probs=24.4

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            36888889999988888999988888874

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=99.04  E-value=1.3e-10  Score=44.16  Aligned_cols=26  Identities=23%  Similarity=0.471  Sum_probs=18.2

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHh
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQ   37 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~   37 (78)
                      ..|++||.|..|++.|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45667777777777777777777776

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=99.04  E-value=2.6e-10  Score=40.66  Aligned_cols=28  Identities=21%  Similarity=0.517  Sum_probs=21.6

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      ||.|..|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            5778888888888888888888877764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=99.04  E-value=2.9e-10  Score=40.77  Aligned_cols=29  Identities=31%  Similarity=0.784  Sum_probs=23.8

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      ||.|..|++.|.....|..|+++|+++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            67888888888888888888888887764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=99.03  E-value=1.8e-10  Score=41.33  Aligned_cols=27  Identities=15%  Similarity=0.411  Sum_probs=16.7

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      ||.|..|++.|.....|..|+++|+|+
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhccC
Confidence            466666666666666666666666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=2.7e-10  Score=42.78  Aligned_cols=32  Identities=31%  Similarity=0.578  Sum_probs=29.9

Q ss_pred             hccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         11 LYKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        11 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .++++++|.|..|++.|.....|..|+++|.+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            57789999999999999999999999999987

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=99.02  E-value=2.4e-10  Score=40.69  Aligned_cols=28  Identities=21%  Similarity=0.421  Sum_probs=20.9

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      ||.|..|++.|.....|..|+++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            5777777777777777777777777764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=99.02  E-value=8.4e-11  Score=46.98  Aligned_cols=37  Identities=14%  Similarity=0.353  Sum_probs=27.0

Q ss_pred             HhhcccCCCCCcccC--CCcccccChhHHHHHHhhhhcCc
Q psy12014         36 HQTYECGQQPKYRCP--LCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        36 h~~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      +...|.+ ++||.|.  .|++.|.....|..|+++|+|++
T Consensus         9 ~~~~H~~-~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMP-DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEET-TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCC-CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3445777 6778884  58888888888888888887764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=99.02  E-value=4.2e-10  Score=41.13  Aligned_cols=29  Identities=21%  Similarity=0.334  Sum_probs=21.1

Q ss_pred             CCcccC--CCcccccChhHHHHHHhhhhcCc
Q psy12014         45 PKYRCP--LCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        45 ~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      +||.|.  .|++.|.....|..|+++|+|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            467777  67777777777777777777664

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=99.01  E-value=3e-10  Score=41.26  Aligned_cols=28  Identities=21%  Similarity=0.422  Sum_probs=20.2

Q ss_pred             CcccC--CCcccccChhHHHHHHhhhhcCc
Q psy12014         46 KYRCP--LCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        46 ~~~c~--~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      ||.|.  .|++.|.....|..|+++|+|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            56776  67777777777777777777654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=5.3e-10  Score=47.84  Aligned_cols=41  Identities=17%  Similarity=0.387  Sum_probs=32.6

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      ..+.+++||.|..|++.|.....|..|+++|++ .. ..+..+
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg-~~-~~~~~~   46 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGV-TS-LQLGYI   46 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTT-TS-CCCCSC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCC-Cc-cccccc
Confidence            347788999999999999999999999999988 43 344443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.99  E-value=2.3e-10  Score=43.46  Aligned_cols=26  Identities=15%  Similarity=0.298  Sum_probs=23.7

Q ss_pred             ccCCCCCcccCCCcccccChhHHHHHH
Q psy12014         40 ECGQQPKYRCPLCSYRAKQKIHLTTHM   66 (78)
Q Consensus        40 h~~~~~~~~c~~c~~~f~~~~~l~~h~   66 (78)
                      +.+ ++||.|..|+++|.+.++|..|+
T Consensus         3 ~~g-ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLK-PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSS-CCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCC-ccCeECCCCCCccCCHhHccCcC
Confidence            456 78999999999999999999998

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=5.7e-10  Score=47.73  Aligned_cols=34  Identities=21%  Similarity=0.168  Sum_probs=30.6

Q ss_pred             ccCCCCCcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014         40 ECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        40 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      +.. ++||.|..|++.|.....|..|+++|++++.
T Consensus         8 ~~~-ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LRE-AGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCC-CCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCC-ccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            555 7899999999999999999999999998754

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.97  E-value=5.8e-10  Score=42.20  Aligned_cols=32  Identities=25%  Similarity=0.412  Sum_probs=29.4

Q ss_pred             hccCCCceecCC--chhhcCCHHHHHHHhhcccC
Q psy12014         11 LYKGGGLFSCSD--CSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        11 ~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .|+++++|.|..  |++.|.....|..|+++|++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            478999999994  99999999999999999987

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.49  E-value=7.5e-11  Score=42.25  Aligned_cols=28  Identities=21%  Similarity=0.389  Sum_probs=20.1

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      ||.|..|++.|.....|..|+++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            5677777777777777777777777654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.93  E-value=6.8e-10  Score=39.85  Aligned_cols=28  Identities=25%  Similarity=0.435  Sum_probs=20.2

Q ss_pred             CcccCCCcccccChhHHHHH-HhhhhcCc
Q psy12014         46 KYRCPLCSYRAKQKIHLTTH-MAIRHHKK   73 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h-~~~~~g~k   73 (78)
                      ||.|..|++.|.....|..| +++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            57777777777777777777 66777654

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.92  E-value=1e-09  Score=47.35  Aligned_cols=39  Identities=26%  Similarity=0.328  Sum_probs=34.9

Q ss_pred             hcccCCCCCcccC--CCcccccChhHHHHHHhhhhcCccccC
Q psy12014         38 TYECGQQPKYRCP--LCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        38 ~~h~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ..+.+ .++|.|.  .|++.|.....|..|+++|+++++|+|
T Consensus        12 ~~~~~-~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C   52 (73)
T 1f2i_G           12 YVVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC   52 (73)
T ss_dssp             CCCCC-CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             ccCCC-CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeEC
Confidence            34666 7889997  599999999999999999999999987

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.92  E-value=9.2e-10  Score=38.57  Aligned_cols=27  Identities=26%  Similarity=0.571  Sum_probs=17.4

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      ||.|..|++.|.....|..|+++|+|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            466777777777777777777766653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.42  E-value=1.6e-10  Score=41.57  Aligned_cols=29  Identities=24%  Similarity=0.385  Sum_probs=19.1

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      +||.|..|++.|.....|..|+++|+|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            35667777777776667777776666653

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.88  E-value=5.4e-10  Score=44.56  Aligned_cols=36  Identities=14%  Similarity=0.256  Sum_probs=31.8

Q ss_pred             hhhhhccCCCceecC--CchhhcCCHHHHHHHhhcccC
Q psy12014          7 LIDSLYKGGGLFSCS--DCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .+...|++++||.|.  .|++.|.....|..|++.|++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            344569999999996  799999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.87  E-value=2.1e-09  Score=46.25  Aligned_cols=34  Identities=18%  Similarity=0.162  Sum_probs=32.2

Q ss_pred             CCCcccCC--CcccccChhHHHHHHhhhhcCccccC
Q psy12014         44 QPKYRCPL--CSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        44 ~~~~~c~~--c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .++|.|..  |++.|.....|..|+++|++++||+|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C   50 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSC   50 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEEC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccC
Confidence            66799988  99999999999999999999999998

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.87  E-value=1.4e-09  Score=38.42  Aligned_cols=25  Identities=28%  Similarity=0.632  Sum_probs=12.0

Q ss_pred             CcccCCCcccccChhHHHHHHhhhh
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      ||.|..|++.|.....|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcC
Confidence            3444445544444444444444443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.86  E-value=2.8e-09  Score=37.58  Aligned_cols=28  Identities=25%  Similarity=0.496  Sum_probs=25.4

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +++|.|..|++.|.....|..|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5789999999999999999999998764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.86  E-value=3.7e-09  Score=37.70  Aligned_cols=28  Identities=21%  Similarity=0.377  Sum_probs=26.2

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +++|.|..|++.|.....|..|++.|.+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            5789999999999999999999999887

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.85  E-value=2.8e-09  Score=37.35  Aligned_cols=24  Identities=25%  Similarity=0.660  Sum_probs=11.7

Q ss_pred             CcccCCCcccccChhHHHHHHhhh
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      ||.|..|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHc
Confidence            344555555555555555554443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.84  E-value=2.5e-09  Score=37.60  Aligned_cols=25  Identities=20%  Similarity=0.312  Sum_probs=13.3

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYE   40 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h   40 (78)
                      +||.|..|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4555555555555555555555443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.83  E-value=2.7e-09  Score=37.41  Aligned_cols=27  Identities=26%  Similarity=0.433  Sum_probs=24.6

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhccc
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYEC   41 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~   41 (78)
                      ++||.|..|++.|.....|..|++.|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            579999999999999999999998774

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.80  E-value=1.3e-10  Score=42.72  Aligned_cols=31  Identities=16%  Similarity=0.387  Sum_probs=28.0

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKY   47 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~   47 (78)
                      +||.|..|++.|.....|..|+++|++ ++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFI-VVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSS-SSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHcc-CCCC
Confidence            589999999999999999999999998 7665

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.79  E-value=2.3e-09  Score=37.71  Aligned_cols=26  Identities=31%  Similarity=0.634  Sum_probs=23.8

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhh
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      +||.|..|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            57999999999999999999998874

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=3e-09  Score=45.15  Aligned_cols=32  Identities=9%  Similarity=0.064  Sum_probs=30.3

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      .+||.|..|++.|. ...|..|+++ ++++||+|
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C   39 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVAC   39 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEEC
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccC
Confidence            67899999999999 9999999999 99999987

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.79  E-value=5.9e-09  Score=36.94  Aligned_cols=27  Identities=22%  Similarity=0.496  Sum_probs=25.4

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            589999999999999999999999987

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.77  E-value=7.5e-09  Score=37.61  Aligned_cols=28  Identities=21%  Similarity=0.579  Sum_probs=26.1

Q ss_pred             CCceecC--CchhhcCCHHHHHHHhhcccC
Q psy12014         15 GGLFSCS--DCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        15 ~~~~~c~--~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ++||.|.  .|++.|.....|..|+++|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            5789999  899999999999999999987

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.74  E-value=8.7e-09  Score=36.40  Aligned_cols=27  Identities=26%  Similarity=0.737  Sum_probs=25.3

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ++|.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            589999999999999999999999987

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.73  E-value=9.4e-09  Score=36.34  Aligned_cols=27  Identities=26%  Similarity=0.612  Sum_probs=25.1

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            479999999999999999999999887

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1.7e-10  Score=49.66  Aligned_cols=37  Identities=16%  Similarity=0.223  Sum_probs=34.6

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCC
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLC   52 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c   52 (78)
                      +++|.|..|++.|.....|..|++.|.+ ++||.|..|
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~-~~~~~C~~C   73 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGNESG-KKTSGPSSG   73 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSCCCC-CCCSSCCCC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHhhcC-CCCCCCCCC
Confidence            7899999999999999999999999999 888999876

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.71  E-value=1.6e-08  Score=36.48  Aligned_cols=27  Identities=26%  Similarity=0.662  Sum_probs=25.1

Q ss_pred             CceecC--CchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCS--DCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~--~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|.  .|++.|.....|..|+++|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            578998  899999999999999999987

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.66  E-value=1.4e-08  Score=36.05  Aligned_cols=27  Identities=15%  Similarity=0.311  Sum_probs=25.1

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ++|.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc
Confidence            478999999999999999999999887

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.66  E-value=1.7e-08  Score=35.66  Aligned_cols=25  Identities=24%  Similarity=0.461  Sum_probs=14.8

Q ss_pred             CcccC--CCcccccChhHHHHHHhhhh
Q psy12014         46 KYRCP--LCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        46 ~~~c~--~c~~~f~~~~~l~~h~~~~~   70 (78)
                      ||.|.  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  56666666666666665554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=2.8e-09  Score=37.03  Aligned_cols=24  Identities=29%  Similarity=0.530  Sum_probs=13.2

Q ss_pred             CcccCCCcccccChhHHHHHHhhh
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      ||.|..|++.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=2.9e-09  Score=38.06  Aligned_cols=28  Identities=25%  Similarity=0.562  Sum_probs=25.6

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ++||.|..|++.|.....|..|++.|.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            4689999999999999999999999876

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.64  E-value=1.1e-08  Score=36.10  Aligned_cols=27  Identities=15%  Similarity=0.441  Sum_probs=25.0

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            589999999999999999999999887

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.07  E-value=3.7e-09  Score=37.58  Aligned_cols=27  Identities=22%  Similarity=0.491  Sum_probs=24.9

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            479999999999999999999999877

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.63  E-value=3.2e-08  Score=34.38  Aligned_cols=26  Identities=31%  Similarity=0.689  Sum_probs=23.4

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            58899999999999999999999876

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.61  E-value=2.7e-08  Score=35.41  Aligned_cols=27  Identities=30%  Similarity=0.747  Sum_probs=24.6

Q ss_pred             CceecCCchhhcCCHHHHHHH-hhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRH-QTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h-~~~h~~   42 (78)
                      +||.|..|++.|.....|..| ++.|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            479999999999999999999 788887

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.03  E-value=4.8e-09  Score=36.39  Aligned_cols=26  Identities=15%  Similarity=0.447  Sum_probs=23.3

Q ss_pred             CceecCCchhhcCCHHHHHHHhhccc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYEC   41 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~   41 (78)
                      +||.|..|++.|.....|..|++.|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999998763

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=5.1e-09  Score=45.74  Aligned_cols=42  Identities=17%  Similarity=0.220  Sum_probs=37.0

Q ss_pred             HHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         33 LTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        33 l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |..|+..+.+ .+|+.|..|++.|. ...|..|. .+.+++|+.|
T Consensus         5 L~~H~~~~c~-~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C   46 (75)
T 2d9k_A            5 SSGHEETECP-LRLAVCQHCDLELS-ILKLKEHE-DYCGARTELC   46 (75)
T ss_dssp             CSCCCCCCCC-CCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEEC
T ss_pred             HHhhCcccCC-CcccCCcccChHhh-HHHHHHHH-hHcCCCceEc
Confidence            4567888888 88999999999995 88999999 8999999987

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.55  E-value=6.6e-08  Score=34.02  Aligned_cols=27  Identities=26%  Similarity=0.774  Sum_probs=24.4

Q ss_pred             CceecC--CchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCS--DCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~--~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            478999  999999999999999998864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.19  E-value=6.4e-06  Score=34.81  Aligned_cols=48  Identities=17%  Similarity=0.389  Sum_probs=39.2

Q ss_pred             CchhhcCCHHHHHHHh-hcccCCC-----CCcccC--CCcccccChhHHHHHHhhh
Q psy12014         22 DCSRVYKKKASLTRHQ-TYECGQQ-----PKYRCP--LCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        22 ~c~~~f~~~~~l~~h~-~~h~~~~-----~~~~c~--~c~~~f~~~~~l~~h~~~~   69 (78)
                      .|++.|.....|..|+ ..|.+..     .+|.|.  .|++.+.....|..|+++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4999999999999998 4687622     268887  6998888888999998875

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=98.06  E-value=1.3e-06  Score=41.51  Aligned_cols=30  Identities=30%  Similarity=0.610  Sum_probs=24.0

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhc
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTY   39 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~   39 (78)
                      ..++|+++|.|..|++.|.+...|..|++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            457788888888888888888888888765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.63  E-value=1.4e-05  Score=37.95  Aligned_cols=30  Identities=23%  Similarity=0.273  Sum_probs=26.1

Q ss_pred             cccCCCCCcccCCCcccccChhHHHHHHhhh
Q psy12014         39 YECGQQPKYRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        39 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      -|++ .+||.|..|++.|.....|..|+++.
T Consensus        44 d~tG-ekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPG-GGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGG-GGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCC-CcceEcccCcchhCCHHHHHHHHhhh
Confidence            3666 67899999999999999999998764

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.05  E-value=0.0013  Score=31.32  Aligned_cols=53  Identities=17%  Similarity=0.244  Sum_probs=41.3

Q ss_pred             CCceecCCchhhcCCHHHHHHHhh--cc-------------------------------cCCCCCcccCCCcccccChhH
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQT--YE-------------------------------CGQQPKYRCPLCSYRAKQKIH   61 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~--~h-------------------------------~~~~~~~~c~~c~~~f~~~~~   61 (78)
                      -+++.|..|...|.+...+..|..  .|                               .+ ...+.|..|...|.....
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~  108 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGE-DRSKCCPVCNMTFSSPVV  108 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCC-CTTTEETTTTEECSSHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCC-CCCeEcCCCCCEeCCHHH
Confidence            367899999999999888888872  12                               11 234779999999999999


Q ss_pred             HHHHHhh
Q psy12014         62 LTTHMAI   68 (78)
Q Consensus        62 l~~h~~~   68 (78)
                      +..|...
T Consensus       109 ~~~H~~g  115 (127)
T 1zu1_A          109 AESHYIG  115 (127)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHCC
Confidence            9988653

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.68  E-value=0.0017  Score=25.63  Aligned_cols=21  Identities=29%  Similarity=0.526  Sum_probs=11.1

Q ss_pred             cccCCCcccccChhHHHHHHh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMA   67 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~   67 (78)
                      +.|+.|+..|+....|..|+.
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            455555555555555555554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.44  E-value=0.0025  Score=25.15  Aligned_cols=27  Identities=26%  Similarity=0.624  Sum_probs=24.0

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .++.|+.|+..|.....|..|+....+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            688999999999999999999986554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.05  E-value=0.0039  Score=30.92  Aligned_cols=57  Identities=18%  Similarity=0.311  Sum_probs=39.6

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcCccc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLG   75 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~   75 (78)
                      .+..|..|+..+. ...|..|....-. .++..|..|+..+. ...+..|..++.|+.++
T Consensus       109 ~~v~C~~C~~~~~-r~~l~~H~~~~C~-~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPFQ-KFHINIHILKDCP-RRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEEE-GGGHHHHHHHTCT-TCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             eeeECCCCChHHH-HHHHHHHhhhhCC-CCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            4567888887764 4557788765555 55678999988765 45788999999887764

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=95.61  E-value=0.0059  Score=27.26  Aligned_cols=25  Identities=24%  Similarity=0.369  Sum_probs=17.4

Q ss_pred             cccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      ..|.+||+.|.   .|..|+.+++|..|
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             eEecccchhhH---HHHHHHHHccCCCH
Confidence            56777887776   35677777766655

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=94.86  E-value=0.022  Score=23.77  Aligned_cols=23  Identities=17%  Similarity=0.248  Sum_probs=19.6

Q ss_pred             CCcccccChhHHHHHH-hhhhcCc
Q psy12014         51 LCSYRAKQKIHLTTHM-AIRHHKK   73 (78)
Q Consensus        51 ~c~~~f~~~~~l~~h~-~~~~g~k   73 (78)
                      .|++.|.....|..|+ ..|.|.+
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~   31 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQD   31 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcc
Confidence            4899999999999998 5787766

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=94.36  E-value=0.029  Score=25.91  Aligned_cols=28  Identities=29%  Similarity=0.555  Sum_probs=18.3

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYR   55 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~   55 (78)
                      .|+.|..||..|.           ... .+|.+|+.|...
T Consensus        66 ~p~~C~~CG~~F~-----------~~~-~kPsrCP~CkSe   93 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEI-NIPSRCPKCKSE   93 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCS-SCCSSCSSSCCC
T ss_pred             ECcChhhCcCeec-----------ccC-CCCCCCcCCCCC
Confidence            5678888888871           111 456788888654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.70  E-value=0.053  Score=19.88  Aligned_cols=20  Identities=25%  Similarity=0.619  Sum_probs=12.2

Q ss_pred             eecCCchhhcCCHHHHHHHh
Q psy12014         18 FSCSDCSRVYKKKASLTRHQ   37 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~   37 (78)
                      |.|+.|.+.+.+...|..|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hy   25 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHY   25 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHH
Confidence            56666666666666666553

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.57  E-value=0.085  Score=23.11  Aligned_cols=52  Identities=17%  Similarity=0.296  Sum_probs=35.4

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhhh
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      --|.|+.|+..+.-+ .+..|...-.+ ...+.|.-|+..|... .+..|..-.+
T Consensus         9 V~F~C~~Cgd~lKK~-kv~~H~~~Cr~-~~~~SCIDC~~~F~~~-~y~~HtsCIS   60 (79)
T 1wjv_A            9 VFFTCNACGESVKKI-QVEKHVSNCRN-CECLSCIDCGKDFWGD-DYKSHVKCIS   60 (79)
T ss_dssp             CEEEESSSCCEEETT-HHHHHHHHCTT-CCEEEETTTTEEEEGG-GTTTCCCCCS
T ss_pred             eEEEcCCCCCeeecc-cchhHHhhCCC-CCcEEecccCCeeCCC-CEeCEeeeCC
Confidence            347899999988754 46678665444 3348999999999854 4555654333

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=92.47  E-value=0.096  Score=24.90  Aligned_cols=28  Identities=11%  Similarity=0.131  Sum_probs=23.5

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhc
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTY   39 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~   39 (78)
                      ..+...+.|..|+..|.+...+..|...
T Consensus        88 ~~~~~~~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           88 DGEDRSKCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             SCCCTTTEETTTTEECSSHHHHHHHHTS
T ss_pred             cCCCCCeEcCCCCCEeCCHHHHHHHHCC
Confidence            4456778999999999999999988763

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=91.80  E-value=0.083  Score=27.20  Aligned_cols=26  Identities=27%  Similarity=0.695  Sum_probs=19.6

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      ..-|.|..||..+.             + ..|+.|+.|+.
T Consensus       169 ~~~~~C~~CG~i~~-------------g-~~p~~CP~C~~  194 (202)
T 1yuz_A          169 DKFHLCPICGYIHK-------------G-EDFEKCPICFR  194 (202)
T ss_dssp             CCEEECSSSCCEEE-------------S-SCCSBCTTTCC
T ss_pred             CcEEEECCCCCEEc-------------C-cCCCCCCCCCC
Confidence            34699999997654             3 45789999974

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=90.62  E-value=0.07  Score=20.96  Aligned_cols=29  Identities=24%  Similarity=0.798  Sum_probs=17.8

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      -|.|..||+.|+..+     +....    ..+|+.||.
T Consensus         3 iY~C~rCg~~fs~~e-----l~~lP----~IrCpyCGy   31 (48)
T 4ayb_P            3 VYRCGKCWKTFTDEQ-----LKVLP----GVRCPYCGY   31 (48)
T ss_dssp             --CCCCTTTTCCCCC-----SCCCS----SSCCTTTCC
T ss_pred             EEEeeccCCCccHHH-----HhhCC----CcccCccCc
Confidence            378999999988543     11112    267888985

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=89.76  E-value=0.31  Score=25.22  Aligned_cols=27  Identities=19%  Similarity=0.277  Sum_probs=22.3

Q ss_pred             CCCcccCCCcccccC-hhHHHHHHhhhh
Q psy12014         44 QPKYRCPLCSYRAKQ-KIHLTTHMAIRH   70 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~-~~~l~~h~~~~~   70 (78)
                      ..|.+|..|+..|.. ...|..|+..+-
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~  194 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEY  194 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHH
Confidence            346899999999976 889999988764

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=88.74  E-value=0.26  Score=24.70  Aligned_cols=26  Identities=19%  Similarity=0.575  Sum_probs=19.2

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      ..-|.|..||..+.             + ..|-.|+.|+.
T Consensus       136 ~~~~~C~~CG~i~~-------------~-~~p~~CP~Cg~  161 (170)
T 3pwf_A          136 KKVYICPICGYTAV-------------D-EAPEYCPVCGA  161 (170)
T ss_dssp             SCEEECTTTCCEEE-------------S-CCCSBCTTTCC
T ss_pred             CCeeEeCCCCCeeC-------------C-CCCCCCCCCCC
Confidence            35689999998764             2 44669999984

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=88.71  E-value=0.11  Score=20.35  Aligned_cols=36  Identities=17%  Similarity=0.511  Sum_probs=20.1

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      +.|.|..||..+.....-.  ...... ...|.|+.|+.
T Consensus         3 ~~y~C~vCGyvyd~~~Gd~--t~f~~l-P~dw~CP~Cg~   38 (46)
T 6rxn_A            3 QKYVCNVCGYEYDPAEHDN--VPFDQL-PDDWCCPVCGV   38 (46)
T ss_dssp             CCEEETTTCCEECGGGGTT--CCGGGS-CTTCBCTTTCC
T ss_pred             CEEECCCCCeEEeCCcCCC--cchhhC-CCCCcCcCCCC
Confidence            4588999998886321100  011111 22379999984

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.32  E-value=0.58  Score=17.30  Aligned_cols=21  Identities=14%  Similarity=0.227  Sum_probs=10.6

Q ss_pred             cccCCCcccccChhHHHHHHh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMA   67 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~   67 (78)
                      ..|..|+-+|+....+..|.+
T Consensus         9 ~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            9 KYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHH
T ss_pred             CeeccccceehhhHHHhhhhe
Confidence            445555555555555554443

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=87.45  E-value=0.18  Score=19.02  Aligned_cols=13  Identities=15%  Similarity=0.544  Sum_probs=6.3

Q ss_pred             ceecCCchhhcCC
Q psy12014         17 LFSCSDCSRVYKK   29 (78)
Q Consensus        17 ~~~c~~c~~~f~~   29 (78)
                      .+.|..|+..+..
T Consensus         9 ~~~C~~C~~~i~~   21 (39)
T 2i5o_A            9 QVPCEKCGSLVPV   21 (39)
T ss_dssp             EEECTTTCCEEEG
T ss_pred             CcccccccCcCCc
Confidence            3455555554443

>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}

Probab=85.72  E-value=0.59  Score=21.87  Aligned_cols=27  Identities=33%  Similarity=0.778  Sum_probs=19.5

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCc-ccCCCccc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKY-RCPLCSYR   55 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~-~c~~c~~~   55 (78)
                      -.|.|..|+..|..            . ..+. .|+.|+..
T Consensus        72 ~~~~C~~CG~~~e~------------~-~~~~~~CP~Cgs~   99 (119)
T 2kdx_A           72 VELECKDCSHVFKP------------N-ALDYGVCEKCHSK   99 (119)
T ss_dssp             CEEECSSSSCEECS------------C-CSTTCCCSSSSSC
T ss_pred             ceEEcCCCCCEEeC------------C-CCCCCcCccccCC
Confidence            35899999988764            1 3357 89999754

>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A

Probab=85.23  E-value=0.16  Score=25.82  Aligned_cols=25  Identities=28%  Similarity=0.747  Sum_probs=17.9

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      .|.|..||..+.             +...|-.|+.|+.
T Consensus       155 ~~~C~~CG~~~~-------------g~~~p~~CP~C~~  179 (191)
T 1lko_A          155 KWRCRNCGYVHE-------------GTGAPELCPACAH  179 (191)
T ss_dssp             EEEETTTCCEEE-------------EEECCSBCTTTCC
T ss_pred             eEEECCCCCEee-------------CCCCCCCCCCCcC
Confidence            689999998764             1134558999975

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=85.06  E-value=0.5  Score=19.14  Aligned_cols=22  Identities=18%  Similarity=0.552  Sum_probs=17.5

Q ss_pred             cccCCCcccccChhHHHHHHhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAI   68 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~   68 (78)
                      -+|..|+..|....++..|+-+
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccccccCcccccccchhhhhcc
Confidence            5899999888888888877543

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=84.95  E-value=1  Score=21.38  Aligned_cols=29  Identities=21%  Similarity=0.348  Sum_probs=22.3

Q ss_pred             CCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         14 GGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        14 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ++.+..|.-|...|.....+..|++...+
T Consensus        12 e~~~~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           12 GRQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCCceeEecCCCcccCHHHHHHHHHHhcC
Confidence            45667888888888888888888886555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	78
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.86
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.67
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.67
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.63
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.62
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.6
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.58
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.58
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.57
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.56
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.53
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.52
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.52
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.5
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.48
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.46
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.45
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.44
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.44
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.42
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.4
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.39
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.37
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.36
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.34
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.34
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.33
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.31
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.25
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.23
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.15
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.14
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.11
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.03
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.03
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.02
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.99
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.97
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.95
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.93
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.92
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.83
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.8
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.76
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.7
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.64
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.64
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.59
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.57
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.56
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.49
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.47
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.45
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.26
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.26
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.25
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.12
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.11
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.1
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.08
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.08
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.06
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.03
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.01
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.91
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.88
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.87
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.83
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.83
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.81
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.8
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.78
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.74
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.69
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.68
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.66
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.64
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.59
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.58
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.46
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.42
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.39
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.38
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.36
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.2
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.1
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.1
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.09
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.58
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.47
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.19
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.01
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.85
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.8
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.76
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	95.62
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.46
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.33
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	95.09
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.01
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	94.62
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.41
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.96
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	93.93
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	93.48
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.79
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.5
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	90.6
d1lkoa2	44	Rubrerythrin, C-terminal domain {Desulfovibrio vul	89.69
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	88.63
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	87.86
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	86.65
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	85.79
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	84.97
d1zina2	35	Microbial and mitochondrial ADK, insert "zinc fing	83.69
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	82.51
d1s3ga2	35	Microbial and mitochondrial ADK, insert "zinc fing	80.96
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	80.28

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.2e-22  Score=81.99  Aligned_cols=53  Identities=32%  Similarity=0.696  Sum_probs=50.7

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccChhHHHHHHhhh
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      |+||.|+ ||+.|.....|..|+++|++ ++||.|..|+++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~-ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSC-CCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhcccc-ccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 99999999999999999999 88999999999999999999999886

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.2e-17  Score=62.78  Aligned_cols=34  Identities=21%  Similarity=0.385  Sum_probs=22.0

Q ss_pred             CCCcccCCCcccccChhHHHHHHh-hhhcCccccC
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMA-IRHHKKLGKI   77 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~-~~~g~k~~~~   77 (78)
                      .+||.|..|+++|...++|..|++ +|+|||||+|
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            456666666666666666666654 5666666666

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.3e-17  Score=63.42  Aligned_cols=36  Identities=14%  Similarity=0.306  Sum_probs=22.9

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      |+.+|++ ++||.|..|+++|...++|..|+++|+||
T Consensus         3 H~~~Ht~-ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRE-RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCC-SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCC-CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4556666 56666666666666666666666666664

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.6e-16  Score=58.31  Aligned_cols=31  Identities=23%  Similarity=0.650  Sum_probs=16.4

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |+|++||.|..|++.|...+.|..|+++|++
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            4555555555555555555555555555544

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.8e-16  Score=57.63  Aligned_cols=33  Identities=18%  Similarity=0.373  Sum_probs=31.3

Q ss_pred             cccCCCCCcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         39 YECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        39 ~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      +|++ ++||+|..|+++|.+.++|..|+++|+||
T Consensus         1 IHTg-ekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSG-EKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTT-CCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCC-CCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            4788 89999999999999999999999999997

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.2e-16  Score=59.48  Aligned_cols=36  Identities=14%  Similarity=0.472  Sum_probs=34.0

Q ss_pred             hhhhhccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014          7 LIDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus         7 ~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .++++|++++||.|+.|+++|...+.|..|+++|++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            367899999999999999999999999999999998

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=9.5e-16  Score=58.19  Aligned_cols=38  Identities=16%  Similarity=0.477  Sum_probs=34.2

Q ss_pred             cCCCceecCCchhhcCCHHHHHHHhh-cccCCCCCcccCC
Q psy12014         13 KGGGLFSCSDCSRVYKKKASLTRHQT-YECGQQPKYRCPL   51 (78)
Q Consensus        13 ~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~~~c~~   51 (78)
                      +.++||.|..|++.|.....|..|++ +|++ ++||.|.+
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~-ekpy~C~i   39 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQV   39 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSS
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCccCC-CcCcCCcC
Confidence            35899999999999999999999975 7999 89999874

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=9.3e-16  Score=57.48  Aligned_cols=33  Identities=21%  Similarity=0.446  Sum_probs=23.3

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ++|+||+||.|..|+++|.....|..|+++|..
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            467777777777777777777777777777665

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=9e-16  Score=54.77  Aligned_cols=29  Identities=34%  Similarity=0.695  Sum_probs=25.4

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      +||.|..|+++|.+.+.|..|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            47889999999999999999999999886

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.57  E-value=8.4e-16  Score=54.92  Aligned_cols=29  Identities=21%  Similarity=0.489  Sum_probs=23.9

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      +||.|..|+++|.+.+.|..|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            47888888888888888888888888876

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=1.1e-15  Score=57.64  Aligned_cols=34  Identities=24%  Similarity=0.444  Sum_probs=22.1

Q ss_pred             hhhhccCCCceecCCchhhcCCHHHHHHHhhccc
Q psy12014          8 IDSLYKGGGLFSCSDCSRVYKKKASLTRHQTYEC   41 (78)
Q Consensus         8 ~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   41 (78)
                      +.++|+||+||.|..|++.|...+.|..|++.|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            3456666666666666666666666666666654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=4.9e-15  Score=54.94  Aligned_cols=31  Identities=26%  Similarity=0.455  Sum_probs=22.4

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ++||+||.|.+|++.|.....|..|+++|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            5677777777777777777777777777765

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=5.4e-15  Score=55.35  Aligned_cols=34  Identities=26%  Similarity=0.457  Sum_probs=31.8

Q ss_pred             hcccCCCCCcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         38 TYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        38 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      ++|++ ++||.|..|+++|...+.|..|+++|+++
T Consensus         1 R~HTg-ekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTG-EKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCC-CCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCC-CCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            47899 89999999999999999999999999876

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.52  E-value=3.4e-15  Score=56.27  Aligned_cols=35  Identities=20%  Similarity=0.328  Sum_probs=32.6

Q ss_pred             HhhcccCCCCCcccCCCcccccChhHHHHHHhhhhc
Q psy12014         36 HQTYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        36 h~~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      |.+.|++ ++||.|..|+++|.+.++|..|+++|.+
T Consensus         2 h~R~HTg-eKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTG-IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCC-ccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            5688999 9999999999999999999999999975

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=6.6e-15  Score=52.00  Aligned_cols=27  Identities=26%  Similarity=0.546  Sum_probs=18.7

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +||.|..|+++|.+.++|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            467777777777777777777777765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.3e-14  Score=54.16  Aligned_cols=31  Identities=26%  Similarity=0.462  Sum_probs=25.7

Q ss_pred             cccCC--CcccccChhHHHHHHhhhhcCccccC
Q psy12014         47 YRCPL--CSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        47 ~~c~~--c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      |.|..  |++.|.....|..|+++|+|+|||+|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            56665  88888888888888888888888887

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.46  E-value=3.3e-14  Score=52.65  Aligned_cols=33  Identities=15%  Similarity=0.413  Sum_probs=30.3

Q ss_pred             ccCCCCCcccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         40 ECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        40 h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      |++ ++||.|..|++.|.+..+|..|+++|+++.
T Consensus         2 ~TG-ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSG-KRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSC-CSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCC-CccccCCCCCCcccChHHHHHHccccCCcC
Confidence            678 889999999999999999999999998753

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.9e-14  Score=53.28  Aligned_cols=30  Identities=13%  Similarity=0.331  Sum_probs=20.3

Q ss_pred             hhccCCCceecCCchhhcCCHHHHHHHhhc
Q psy12014         10 SLYKGGGLFSCSDCSRVYKKKASLTRHQTY   39 (78)
Q Consensus        10 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~   39 (78)
                      ++|+||+||.|+.|++.|.....|..|+..
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccc
Confidence            356777777777777777777777777543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=2.7e-14  Score=50.40  Aligned_cols=28  Identities=29%  Similarity=0.539  Sum_probs=26.8

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |+||.|..|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7899999999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=3.8e-14  Score=48.97  Aligned_cols=26  Identities=27%  Similarity=0.457  Sum_probs=18.9

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhh
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      +||+|.+||++|...++|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46777777777777777777777764

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.2e-14  Score=57.06  Aligned_cols=33  Identities=18%  Similarity=0.275  Sum_probs=30.9

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhhcCccccC
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRHHKKLGKI   77 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~~~~   77 (78)
                      ++||.| .||++|.....|..|+++|+|++||+|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C   33 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGC   33 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEEC
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcC
Confidence            468999 599999999999999999999999988

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.40  E-value=1.3e-14  Score=57.22  Aligned_cols=38  Identities=13%  Similarity=0.400  Sum_probs=28.9

Q ss_pred             HHHhhcccCCCCCcccCC--CcccccChhHHHHHHhhhhcCc
Q psy12014         34 TRHQTYECGQQPKYRCPL--CSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        34 ~~h~~~h~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      ..|+ .|.+ ++||.|..  |+++|...++|..|+++|+|||
T Consensus         8 ~~h~-~h~g-ekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           8 DKYV-KEMP-DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSC-EEET-TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchh-hccC-CCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3444 3777 77888866  8888888888888888888875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.7e-13  Score=51.16  Aligned_cols=34  Identities=24%  Similarity=0.509  Sum_probs=30.2

Q ss_pred             hcccCCCCCcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         38 TYECGQQPKYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        38 ~~h~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      ++|++ ++||.|..|++.|....+|..|++.++++
T Consensus         1 R~HTg-ekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSG-EKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSC-CCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCC-CCCEeCCCCcccccchHHHHHHcccccCC
Confidence            47899 89999999999999999999998776654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.37  E-value=2.5e-13  Score=48.35  Aligned_cols=27  Identities=26%  Similarity=0.612  Sum_probs=26.2

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|.+|++.|...+.|..|+++|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC
Confidence            689999999999999999999999999

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=3.4e-13  Score=48.22  Aligned_cols=28  Identities=18%  Similarity=0.368  Sum_probs=21.2

Q ss_pred             CCcccCC--CcccccChhHHHHHHhhhhcC
Q psy12014         45 PKYRCPL--CSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        45 ~~~~c~~--c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      +||.|..  |+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4677776  777887777788888777775

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=4.1e-13  Score=47.71  Aligned_cols=27  Identities=19%  Similarity=0.581  Sum_probs=26.2

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|.+|++.|...+.|..|+++|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            689999999999999999999999998

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3e-13  Score=46.67  Aligned_cols=26  Identities=19%  Similarity=0.629  Sum_probs=24.6

Q ss_pred             CceecCCchhhcCCHHHHHHHhhccc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYEC   41 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~   41 (78)
                      +||.|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999885

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=5e-13  Score=47.82  Aligned_cols=28  Identities=25%  Similarity=0.585  Sum_probs=21.3

Q ss_pred             CCcccCC--CcccccChhHHHHHHhhhhcC
Q psy12014         45 PKYRCPL--CSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        45 ~~~~c~~--c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      +||.|..  |+++|...++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4677766  788888888888888888775

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=7.1e-13  Score=47.77  Aligned_cols=29  Identities=21%  Similarity=0.398  Sum_probs=22.2

Q ss_pred             CCcccC--CCcccccChhHHHHHHhhhhcCc
Q psy12014         45 PKYRCP--LCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        45 ~~~~c~--~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      +||.|+  .|++.|...++|..|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            467775  48888888888888888888875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.25  E-value=5.6e-13  Score=52.43  Aligned_cols=36  Identities=14%  Similarity=0.257  Sum_probs=32.2

Q ss_pred             hhhhhhccCCCceecCC--chhhcCCHHHHHHHhhcccC
Q psy12014          6 KLIDSLYKGGGLFSCSD--CSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus         6 ~~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ..+. .|+|++||.|.+  |++.|...+.|..|+++|++
T Consensus         8 ~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_           8 DKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             cchh-hccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            3444 499999999987  99999999999999999998

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=3.8e-12  Score=47.32  Aligned_cols=32  Identities=28%  Similarity=0.717  Sum_probs=29.6

Q ss_pred             eecCC--chhhcCCHHHHHHHhhcccCCCCCcccC
Q psy12014         18 FSCSD--CSRVYKKKASLTRHQTYECGQQPKYRCP   50 (78)
Q Consensus        18 ~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~c~   50 (78)
                      |.|..  |++.|.....|.+|+++|++ ++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg-ekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD-TRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT-SCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC-CCCEeCC
Confidence            67876  99999999999999999999 9999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.6e-11  Score=43.77  Aligned_cols=27  Identities=22%  Similarity=0.497  Sum_probs=25.8

Q ss_pred             CceecCC--chhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSD--CSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~--c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|.+  |++.|...+.|..|+++|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            6899988  99999999999999999998

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=1.5e-11  Score=43.50  Aligned_cols=27  Identities=33%  Similarity=0.711  Sum_probs=18.3

Q ss_pred             CCcccCC--CcccccChhHHHHHHhhhhc
Q psy12014         45 PKYRCPL--CSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        45 ~~~~c~~--c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +||.|..  |+++|...++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3566655  77777777777777777765

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2.7e-11  Score=43.20  Aligned_cols=27  Identities=22%  Similarity=0.504  Sum_probs=25.6

Q ss_pred             CceecCC--chhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSD--CSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~--c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|..  |++.|...+.|..|+++|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            6899987  99999999999999999998

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.2e-10  Score=41.77  Aligned_cols=27  Identities=26%  Similarity=0.662  Sum_probs=25.2

Q ss_pred             CceecC--CchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCS--DCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~--~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|+  .|++.|...+.|..|+++|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            689996  599999999999999999998

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=6.9e-11  Score=41.74  Aligned_cols=27  Identities=33%  Similarity=0.721  Sum_probs=25.1

Q ss_pred             CceecCC--chhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSD--CSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~--c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|.+  |++.|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899987  99999999999999999976

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.02  E-value=1.9e-10  Score=41.45  Aligned_cols=27  Identities=19%  Similarity=0.354  Sum_probs=14.7

Q ss_pred             CCcccCC--CcccccChhHHHHHHhhhhc
Q psy12014         45 PKYRCPL--CSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        45 ~~~~c~~--c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +||.|..  |++.|....+|..|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            3455544  55555555555555555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.99  E-value=1.8e-10  Score=41.56  Aligned_cols=28  Identities=21%  Similarity=0.583  Sum_probs=26.4

Q ss_pred             CCceecCC--chhhcCCHHHHHHHhhcccC
Q psy12014         15 GGLFSCSD--CSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        15 ~~~~~c~~--c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |+||.|..  |++.|...+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            68999988  99999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=2.1e-10  Score=37.86  Aligned_cols=25  Identities=28%  Similarity=0.458  Sum_probs=13.2

Q ss_pred             cccCCCcccccChhHHHHHHhhhhc
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      ..|..|++.|+....|..|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            3455555555555555555555543

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.8e-10  Score=40.25  Aligned_cols=26  Identities=27%  Similarity=0.657  Sum_probs=19.8

Q ss_pred             CCcccCC--CcccccChhHHHHHHhhhh
Q psy12014         45 PKYRCPL--CSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        45 ~~~~c~~--c~~~f~~~~~l~~h~~~~~   70 (78)
                      +||.|..  |+++|....+|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  8888888888888888774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=3.8e-10  Score=39.73  Aligned_cols=29  Identities=21%  Similarity=0.316  Sum_probs=20.7

Q ss_pred             cccCCCcccccChhHHHHHHhhhhcCccc
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRHHKKLG   75 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~g~k~~   75 (78)
                      ..|..||+.|...-.|+.|...|+|||||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            45677777777777777777777777776

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=6.2e-10  Score=36.72  Aligned_cols=26  Identities=23%  Similarity=0.599  Sum_probs=24.1

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |+.|+.|++.|+.+..|..|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=2.1e-09  Score=36.50  Aligned_cols=26  Identities=23%  Similarity=0.549  Sum_probs=16.6

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcc
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYE   40 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h   40 (78)
                      |+||.|+.||+.|.......+|..+|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            45666666666666666666666655

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=2.7e-10  Score=39.78  Aligned_cols=26  Identities=15%  Similarity=0.451  Sum_probs=24.0

Q ss_pred             CceecCC--chhhcCCHHHHHHHhhccc
Q psy12014         16 GLFSCSD--CSRVYKKKASLTRHQTYEC   41 (78)
Q Consensus        16 ~~~~c~~--c~~~f~~~~~l~~h~~~h~   41 (78)
                      +||.|..  |++.|...++|..|++.|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899988  9999999999999999885

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3.1e-09  Score=35.83  Aligned_cols=28  Identities=21%  Similarity=0.665  Sum_probs=19.8

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      +||+|..|......++.|..|.+.|+|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            4677777777777777777777777763

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.3e-08  Score=35.76  Aligned_cols=32  Identities=22%  Similarity=0.586  Sum_probs=28.8

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccCCCCCc
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKY   47 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~   47 (78)
                      .+...|++||++|.....|.+|...|++ ++||
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~-ekpy   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSG-EKPY   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCS-CCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCC-CCCC
Confidence            3567899999999999999999999999 8887

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.1e-08  Score=34.27  Aligned_cols=24  Identities=17%  Similarity=0.314  Sum_probs=12.1

Q ss_pred             ccCCCcccccChhHHHHHHhhhhc
Q psy12014         48 RCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        48 ~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      .|.+||++|..++.|..|+-.|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            344455555555555555555544

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=1.6e-08  Score=34.27  Aligned_cols=27  Identities=15%  Similarity=0.400  Sum_probs=24.5

Q ss_pred             CCCcccCCCcccccChhHHHHHHhhhh
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      ++||.|..||+.|..+.....|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            468999999999999999999999884

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=2.8e-08  Score=32.84  Aligned_cols=26  Identities=27%  Similarity=0.446  Sum_probs=21.2

Q ss_pred             ccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         48 RCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        48 ~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      +|+.|.+.|.+...|..|.+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57788888888888888888888875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=5e-08  Score=32.66  Aligned_cols=26  Identities=27%  Similarity=0.746  Sum_probs=24.1

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .+.|..||++|...+.|.+|+.+|++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccC
Confidence            46899999999999999999999987

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=3.9e-08  Score=33.23  Aligned_cols=27  Identities=30%  Similarity=0.570  Sum_probs=19.9

Q ss_pred             cccCCCcccccChhHHHHHHhhhhcCc
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRHHKK   73 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~g~k   73 (78)
                      |.|..|+.....++.|..|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            567777777777777777777777764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=9.6e-08  Score=32.10  Aligned_cols=28  Identities=25%  Similarity=0.446  Sum_probs=26.0

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |+||+|..|..+....+.|..|.+.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            6899999999999999999999999987

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=7.4e-08  Score=33.06  Aligned_cols=27  Identities=30%  Similarity=0.661  Sum_probs=14.5

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +||.|++|...|.....+.-|.+.|-|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            345555555555555555555555543

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=6.7e-08  Score=33.17  Aligned_cols=28  Identities=25%  Similarity=0.503  Sum_probs=26.1

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |+||.|.+|...|..++...-|.+.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            6899999999999999999999999877

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=5e-07  Score=30.07  Aligned_cols=26  Identities=31%  Similarity=0.722  Sum_probs=16.3

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhh
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      +|++|..|..+-...++|+.|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            45666666666666666666666653

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=4.1e-07  Score=31.15  Aligned_cols=27  Identities=30%  Similarity=0.549  Sum_probs=17.3

Q ss_pred             CCcccCC--CcccccChhHHHHHHhhhhc
Q psy12014         45 PKYRCPL--CSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        45 ~~~~c~~--c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +||.|..  |++++..+++|..|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            3566655  66777777777777666554

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.25  E-value=5.1e-07  Score=29.28  Aligned_cols=23  Identities=35%  Similarity=0.819  Sum_probs=15.4

Q ss_pred             eecCCchhhcCCHHHHHHHhhcc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYE   40 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h   40 (78)
                      |.|..|.+.|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666777777777777776665

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=1.6e-06  Score=31.93  Aligned_cols=26  Identities=27%  Similarity=0.567  Sum_probs=17.5

Q ss_pred             cCCCceecCCchhhcCCHHHHHHHhh
Q psy12014         13 KGGGLFSCSDCSRVYKKKASLTRHQT   38 (78)
Q Consensus        13 ~~~~~~~c~~c~~~f~~~~~l~~h~~   38 (78)
                      +|-+||.|..|++.|-+.+.+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            35567777777777777776666643

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=1.7e-06  Score=29.14  Aligned_cols=25  Identities=24%  Similarity=0.498  Sum_probs=23.5

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccC
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |.|..|+.....++.|+.|++.|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            6899999999999999999999998

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.10  E-value=1.8e-06  Score=28.97  Aligned_cols=24  Identities=29%  Similarity=0.625  Sum_probs=16.6

Q ss_pred             CcccCC--CcccccChhHHHHHHhhh
Q psy12014         46 KYRCPL--CSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        46 ~~~c~~--c~~~f~~~~~l~~h~~~~   69 (78)
                      ||.|+.  |++.|..++.|..|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            566654  777777777777777665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.08  E-value=2.9e-06  Score=30.93  Aligned_cols=27  Identities=22%  Similarity=0.482  Sum_probs=16.3

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +.|.|..|++.|.+-..|--|++.|..
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcc
Confidence            345666666666666666666666544

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.08  E-value=1.7e-06  Score=31.58  Aligned_cols=30  Identities=20%  Similarity=0.524  Sum_probs=26.4

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      +.|+|..|++.|.....|-.|++.|..++.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            459999999999999999999999976653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=2.9e-06  Score=28.20  Aligned_cols=26  Identities=19%  Similarity=0.465  Sum_probs=23.9

Q ss_pred             CceecCCchhhcCCHHHHHHHhhccc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYEC   41 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~   41 (78)
                      +|+.|..|..+-...+.|..|.++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999885

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1e-06  Score=30.39  Aligned_cols=27  Identities=19%  Similarity=0.317  Sum_probs=17.6

Q ss_pred             CCcccCC--CcccccChhHHHHHH-hhhhc
Q psy12014         45 PKYRCPL--CSYRAKQKIHLTTHM-AIRHH   71 (78)
Q Consensus        45 ~~~~c~~--c~~~f~~~~~l~~h~-~~~~g   71 (78)
                      +||.|..  |.++|+..+....|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            3566655  777777777766675 66654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.01  E-value=3.8e-06  Score=28.31  Aligned_cols=27  Identities=22%  Similarity=0.362  Sum_probs=17.4

Q ss_pred             CcccCC--CcccccChhHHHHHHhhhhcC
Q psy12014         46 KYRCPL--CSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        46 ~~~c~~--c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      ||.|..  |.+.|...-.|..|..+|+||
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455543  667777777777777777664

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.91  E-value=4.9e-06  Score=27.31  Aligned_cols=24  Identities=25%  Similarity=0.551  Sum_probs=22.5

Q ss_pred             ecCCchhhcCCHHHHHHHhhcccC
Q psy12014         19 SCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        19 ~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .|..|.+.|.++..|..|-+.|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             cCcchHHHHHHhHhhhhccccccC
Confidence            589999999999999999999998

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.3e-05  Score=27.04  Aligned_cols=27  Identities=30%  Similarity=0.806  Sum_probs=18.9

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      +||+|..|......+++|..|+.+-++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            467777777766677777777776543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.87  E-value=7.4e-06  Score=27.46  Aligned_cols=25  Identities=20%  Similarity=0.573  Sum_probs=22.0

Q ss_pred             CceecCC--chhhcCCHHHHHHHhhcc
Q psy12014         16 GLFSCSD--CSRVYKKKASLTRHQTYE   40 (78)
Q Consensus        16 ~~~~c~~--c~~~f~~~~~l~~h~~~h   40 (78)
                      .||.|..  |++.|..++.|.+|..+|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5888875  999999999999998876

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.83  E-value=1.1e-05  Score=26.07  Aligned_cols=24  Identities=29%  Similarity=0.645  Sum_probs=21.6

Q ss_pred             cccCCCcccccChhHHHHHHhhhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      |.|-.|.++|...+.|..|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578899999999999999999884

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.83  E-value=1e-05  Score=27.82  Aligned_cols=22  Identities=27%  Similarity=0.764  Sum_probs=14.7

Q ss_pred             ceecCCchhhcCCHHHHHHHhh
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQT   38 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~   38 (78)
                      ||.|..|++.|...+.|.+|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            5667777777777766666644

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=1.4e-05  Score=27.24  Aligned_cols=25  Identities=24%  Similarity=0.539  Sum_probs=22.2

Q ss_pred             CceecCC--chhhcCCHHHHHHHhhcc
Q psy12014         16 GLFSCSD--CSRVYKKKASLTRHQTYE   40 (78)
Q Consensus        16 ~~~~c~~--c~~~f~~~~~l~~h~~~h   40 (78)
                      +||.|..  |++.+..++.|..|+..+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            6899987  999999999999999864

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.80  E-value=1.6e-05  Score=26.65  Aligned_cols=26  Identities=27%  Similarity=0.732  Sum_probs=12.7

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      -|.|..|...|...-.|..|+..|++
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            34455555555544445555544443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=1.3e-05  Score=26.89  Aligned_cols=24  Identities=29%  Similarity=0.661  Sum_probs=18.6

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYE   40 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h   40 (78)
                      ||.|..|...|....+|..|+..-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            577888888888888888887753

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.5e-05  Score=29.30  Aligned_cols=25  Identities=20%  Similarity=0.453  Sum_probs=21.9

Q ss_pred             CCCcccCCCcccccChhHHHHHHhh
Q psy12014         44 QPKYRCPLCSYRAKQKIHLTTHMAI   68 (78)
Q Consensus        44 ~~~~~c~~c~~~f~~~~~l~~h~~~   68 (78)
                      -+||+|..|++.|-...++..|...
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhhh
Confidence            6799999999999999999888654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.69  E-value=2.2e-05  Score=26.28  Aligned_cols=27  Identities=19%  Similarity=0.549  Sum_probs=25.1

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhcC
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      .|.|..|...|...-.|..|+-.|+||
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            489999999999999999999999986

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.9e-05  Score=28.59  Aligned_cols=28  Identities=18%  Similarity=0.453  Sum_probs=22.1

Q ss_pred             CCCceecC--CchhhcCCHHHHHHHhhccc
Q psy12014         14 GGGLFSCS--DCSRVYKKKASLTRHQTYEC   41 (78)
Q Consensus        14 ~~~~~~c~--~c~~~f~~~~~l~~h~~~h~   41 (78)
                      .++||.|.  -|+..|.+...|.+|..-|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            37888884  48889998888888877664

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.66  E-value=1.7e-05  Score=27.25  Aligned_cols=26  Identities=27%  Similarity=0.464  Sum_probs=21.8

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhc
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      ||.|..|++.|....-|..|++..++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            68999999999999988889765443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=4e-05  Score=25.75  Aligned_cols=26  Identities=35%  Similarity=0.723  Sum_probs=17.8

Q ss_pred             CcccCCCcccccChhHHHHHHhhhhc
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRHH   71 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~g   71 (78)
                      ||+|..|+....+.++|..|++.-+|
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            67777777666777777777665444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.59  E-value=3.5e-05  Score=25.40  Aligned_cols=22  Identities=32%  Similarity=0.549  Sum_probs=17.5

Q ss_pred             CcccCCCcccccChhHHHHHHh
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMA   67 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~   67 (78)
                      ||+|..||+.+....+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6788888888888888877754

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.58  E-value=1.8e-05  Score=26.63  Aligned_cols=27  Identities=30%  Similarity=0.646  Sum_probs=23.6

Q ss_pred             CceecCC--chhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSD--CSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~--c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +||.|..  |.+.|.+-..|.+|...|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            5788865  99999999999999988887

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=5.6e-05  Score=25.44  Aligned_cols=26  Identities=15%  Similarity=0.318  Sum_probs=22.6

Q ss_pred             CceecCCchhhcCCHHHHHHHhhccc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYEC   41 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~   41 (78)
                      +||.|..|.......++|..|+....
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            68999999999888999999988733

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.42  E-value=9.5e-05  Score=23.77  Aligned_cols=21  Identities=33%  Similarity=0.763  Sum_probs=10.8

Q ss_pred             ceecCCchhhcCCHHHHHHHh
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQ   37 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~   37 (78)
                      ||.|..|...|-.+..|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            455555555555555555544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=7.3e-05  Score=24.04  Aligned_cols=22  Identities=41%  Similarity=0.738  Sum_probs=20.0

Q ss_pred             CcccCCCcccccChhHHHHHHh
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMA   67 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~   67 (78)
                      ||.|..|+..|-+...|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999998864

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=8.3e-05  Score=26.28  Aligned_cols=20  Identities=20%  Similarity=0.115  Sum_probs=14.0

Q ss_pred             cccccChhHHHHHHhhhhcC
Q psy12014         53 SYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        53 ~~~f~~~~~l~~h~~~~~g~   72 (78)
                      ++.|.....|..|+|.|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            34566777777777777775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00011  Score=24.31  Aligned_cols=23  Identities=35%  Similarity=0.638  Sum_probs=15.0

Q ss_pred             cccCCCcccccChhHHHHHHhhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      -+|+.|+++.+....|..|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            45666666666666666666665

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.0001  Score=27.99  Aligned_cols=27  Identities=22%  Similarity=0.612  Sum_probs=23.4

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      .-+.|..|++.|+....|..|...|..
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            357899999999999999999988765

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00023  Score=23.79  Aligned_cols=24  Identities=38%  Similarity=0.762  Sum_probs=21.6

Q ss_pred             CcccCCCcccccChhHHHHHHhhh
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      ||.|..|..+|....+|..|++.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            689999999999999999998754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00038  Score=22.98  Aligned_cols=26  Identities=35%  Similarity=0.598  Sum_probs=22.5

Q ss_pred             ceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |-+|..|....+++..|..|.++|..
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            45799999999999999999998853

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00032  Score=25.29  Aligned_cols=27  Identities=22%  Similarity=0.420  Sum_probs=23.4

Q ss_pred             CCCcccC--CCcccccChhHHHHHHhhhh
Q psy12014         44 QPKYRCP--LCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        44 ~~~~~c~--~c~~~f~~~~~l~~h~~~~~   70 (78)
                      ++||.|.  .|+..|.....|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            6899994  59999999999999988774

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.00076  Score=23.73  Aligned_cols=23  Identities=30%  Similarity=0.414  Sum_probs=18.7

Q ss_pred             cCCchhhcCCHHHHHHHhhcccC
Q psy12014         20 CSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        20 c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      |..-++.|.....|..|++.|++
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCC
Confidence            33445679999999999999998

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.47  E-value=0.0021  Score=21.73  Aligned_cols=27  Identities=19%  Similarity=0.535  Sum_probs=22.3

Q ss_pred             CcccCC--CcccccChhHHHHHHhhhhcC
Q psy12014         46 KYRCPL--CSYRAKQKIHLTTHMAIRHHK   72 (78)
Q Consensus        46 ~~~c~~--c~~~f~~~~~l~~h~~~~~g~   72 (78)
                      .|.|..  |+..|+....|..|+-.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            366654  888999999999999999886

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.19  E-value=0.0029  Score=20.24  Aligned_cols=22  Identities=36%  Similarity=0.788  Sum_probs=12.9

Q ss_pred             cccCCCcccccChhHHHHHHhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAI   68 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~   68 (78)
                      |.|+.|.+-|....++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4566666666666666655544

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.0032  Score=21.92  Aligned_cols=24  Identities=13%  Similarity=0.332  Sum_probs=14.9

Q ss_pred             cccCCCcccccChhHHHHHHhhhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      |.|..|+++|.....+..|....+
T Consensus         5 fvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeecccccchhcchHHHHHhhhcC
Confidence            566677777766666666654443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.0053  Score=20.06  Aligned_cols=22  Identities=32%  Similarity=0.662  Sum_probs=15.9

Q ss_pred             eecCCchhhcCCHHHHHHHhhc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTY   39 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~   39 (78)
                      |.|+.|+.....++.|..|.+.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5677777777777777777654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.80  E-value=0.0039  Score=21.47  Aligned_cols=23  Identities=30%  Similarity=0.716  Sum_probs=18.0

Q ss_pred             ceecCCchhhcCCHHHHHHHhhc
Q psy12014         17 LFSCSDCSRVYKKKASLTRHQTY   39 (78)
Q Consensus        17 ~~~c~~c~~~f~~~~~l~~h~~~   39 (78)
                      .|.|..||-.|++.+-|..|+..
T Consensus         8 rf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ceeccccceeecChhHHHhhhhe
Confidence            46788888888888888877754

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0053  Score=23.15  Aligned_cols=25  Identities=24%  Similarity=0.299  Sum_probs=21.7

Q ss_pred             CcccCCCcccccChhHHHHHHhhhh
Q psy12014         46 KYRCPLCSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        46 ~~~c~~c~~~f~~~~~l~~h~~~~~   70 (78)
                      -+.|-.|++.|.....|..|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            3789999999999999999987763

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0024  Score=26.14  Aligned_cols=26  Identities=35%  Similarity=0.758  Sum_probs=20.5

Q ss_pred             CCCceecCCchhhcCCHHHHHHHhhc
Q psy12014         14 GGGLFSCSDCSRVYKKKASLTRHQTY   39 (78)
Q Consensus        14 ~~~~~~c~~c~~~f~~~~~l~~h~~~   39 (78)
                      |...|.|..|++.|.+...|..|.+.
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            44458888899999988888888764

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.46  E-value=0.013  Score=21.95  Aligned_cols=30  Identities=30%  Similarity=0.599  Sum_probs=19.2

Q ss_pred             CCcccCCCcccccChhHHHHHHhhhhcCcc
Q psy12014         45 PKYRCPLCSYRAKQKIHLTTHMAIRHHKKL   74 (78)
Q Consensus        45 ~~~~c~~c~~~f~~~~~l~~h~~~~~g~k~   74 (78)
                      .|-.|+.|+....++.+|..|....+=.||
T Consensus        23 qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            356677777777777777777665544444

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.33  E-value=0.01  Score=19.20  Aligned_cols=19  Identities=21%  Similarity=0.280  Sum_probs=11.2

Q ss_pred             CcccccChhHHHHHHhhhh
Q psy12014         52 CSYRAKQKIHLTTHMAIRH   70 (78)
Q Consensus        52 c~~~f~~~~~l~~h~~~~~   70 (78)
                      |+++|..-..|..|+-+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            5666666555666655554

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.09  E-value=0.0088  Score=20.84  Aligned_cols=26  Identities=35%  Similarity=0.712  Sum_probs=18.0

Q ss_pred             CCCceecCCchhhcCCHHHHHHHhhc
Q psy12014         14 GGGLFSCSDCSRVYKKKASLTRHQTY   39 (78)
Q Consensus        14 ~~~~~~c~~c~~~f~~~~~l~~h~~~   39 (78)
                      |+..|+|..|.+.+...+++-+|...
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            44567777787777777777766543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.01  Score=19.47  Aligned_cols=18  Identities=11%  Similarity=0.361  Sum_probs=15.3

Q ss_pred             CcccccChhHHHHHHhhh
Q psy12014         52 CSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        52 c~~~f~~~~~l~~h~~~~   69 (78)
                      |.+.|...+.+..|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            888899888888888776

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=94.62  E-value=0.016  Score=20.68  Aligned_cols=26  Identities=23%  Similarity=0.652  Sum_probs=18.8

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      ++-|.|..||..             +.+ ..|-.|++|+.
T Consensus         3 ~~~~vC~vCGyi-------------~~g-~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYI-------------HKG-EDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCE-------------EES-SCCSBCTTTCC
T ss_pred             CCEEECCCCCCE-------------eeC-CCCCcCCCCCC
Confidence            456889999854             345 55778999974

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.41  E-value=0.0082  Score=24.52  Aligned_cols=22  Identities=27%  Similarity=0.433  Sum_probs=20.0

Q ss_pred             cccCCCcccccChhHHHHHHhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAI   68 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~   68 (78)
                      |-|..|++.|.....|..|.++
T Consensus        16 fYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             EecccccCccCCHHHHHHHHcc
Confidence            7899999999999999999765

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.96  E-value=0.036  Score=18.28  Aligned_cols=23  Identities=13%  Similarity=0.429  Sum_probs=14.0

Q ss_pred             cccCCCcccccChhHHHHHHhhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAIR   69 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~~   69 (78)
                      |.|..|++.......+..|....
T Consensus         3 ftc~hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEeec
Confidence            55666666666666666665443

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.93  E-value=0.022  Score=20.41  Aligned_cols=26  Identities=19%  Similarity=0.625  Sum_probs=18.5

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      ++-|.|..||..             +.+ ..|-.|++|+.
T Consensus         3 ~~~~~C~vCG~i-------------~~g-~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYT-------------AVD-EAPEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCE-------------EES-CCCSBCTTTCC
T ss_pred             CcEEECCCCCCE-------------ecC-CCCCcCCCCCC
Confidence            356889999854             334 55778999974

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.48  E-value=0.046  Score=17.94  Aligned_cols=18  Identities=17%  Similarity=0.152  Sum_probs=10.5

Q ss_pred             CCcccccChhHHHHHHhh
Q psy12014         51 LCSYRAKQKIHLTTHMAI   68 (78)
Q Consensus        51 ~c~~~f~~~~~l~~h~~~   68 (78)
                      .|++.|+....|+-|.+.
T Consensus         7 gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTCCEESSHHHHHHHHHH
T ss_pred             CchhhhccHHHHHhHHHH
Confidence            366666666666655443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.79  E-value=0.071  Score=21.30  Aligned_cols=40  Identities=18%  Similarity=0.492  Sum_probs=26.9

Q ss_pred             ccCCCceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccc
Q psy12014         12 YKGGGLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYR   55 (78)
Q Consensus        12 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~   55 (78)
                      .+....|.|+.|++.|+.-..++   ..... ...|.|..|+.-
T Consensus         9 ~~~~~~y~Cp~C~~~ys~Lda~~---L~d~~-~~~F~C~~C~~e   48 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTE   48 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCB
T ss_pred             cccCCceECCCCCCCcchhhHHH---hcCcC-CCeEEecCCCCE
Confidence            34567799999999998655443   33222 334899998753

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.50  E-value=0.1  Score=20.90  Aligned_cols=28  Identities=21%  Similarity=0.471  Sum_probs=22.4

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      ...|.|..|+..|.+...|..|...|..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            4568899999888888888888877754

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.60  E-value=0.055  Score=23.93  Aligned_cols=28  Identities=29%  Similarity=0.551  Sum_probs=15.6

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYR   55 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~   55 (78)
                      .|-.|..||..|..           .. .+|-+|+.|...
T Consensus        66 ~Pp~CrkCGfvFr~-----------~~-kkPSRCP~CKSE   93 (105)
T d2gmga1          66 KPAQCRKCGFVFKA-----------EI-NIPSRCPKCKSE   93 (105)
T ss_dssp             CCCBBTTTCCBCCC-----------CS-SCCSSCSSSCCC
T ss_pred             eChhhhhcCCeecc-----------cC-CCCCCCCCCCCc
Confidence            34567777766631           11 556677777543

>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=89.69  E-value=0.033  Score=20.74  Aligned_cols=26  Identities=27%  Similarity=0.650  Sum_probs=17.6

Q ss_pred             CceecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcc
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSY   54 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~   54 (78)
                      ..|.|..||..+             .+...|-.|+.|+.
T Consensus         7 ~~W~C~~CGyi~-------------~g~~aP~~CPvC~~   32 (44)
T d1lkoa2           7 TKWRCRNCGYVH-------------EGTGAPELCPACAH   32 (44)
T ss_dssp             EEEEETTTCCEE-------------EEEECCSBCTTTCC
T ss_pred             eEEEcCCCCcEE-------------ECCCCCCcCCCCCC
Confidence            358899998543             33245678999974

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=88.63  E-value=0.13  Score=18.28  Aligned_cols=32  Identities=16%  Similarity=0.080  Sum_probs=19.8

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccC
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQ   58 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~   58 (78)
                      +.|..||..|-        ...... +.+-.|..|+..+.+
T Consensus         3 ~vc~~cG~~Yh--------~~~~pP-k~~g~CD~cg~~L~q   34 (37)
T d2ak3a2           3 WIHPGSGRVYN--------IEFNPP-KTMGIDDLTGEPLVQ   34 (37)
T ss_dssp             EEETTTTEEEE--------TTTBCC-SSTTBCTTTCCBCBC
T ss_pred             eeeCCcCChhh--------hccCCc-cccCCccCCCCcCEe
Confidence            46777777763        333445 555788888865443

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.65  E-value=0.15  Score=17.75  Aligned_cols=22  Identities=18%  Similarity=0.271  Sum_probs=17.2

Q ss_pred             cccCCCcccccChhHHHHHHhh
Q psy12014         47 YRCPLCSYRAKQKIHLTTHMAI   68 (78)
Q Consensus        47 ~~c~~c~~~f~~~~~l~~h~~~   68 (78)
                      ..|..|-++|...-++..|+-.
T Consensus         4 ltclecmrtfkssfsiwrhqve   25 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVE   25 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHhhhe
Confidence            5688888888888888887654

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.79  E-value=0.52  Score=17.91  Aligned_cols=25  Identities=24%  Similarity=0.356  Sum_probs=16.0

Q ss_pred             CCCcccCC--CcccccChhHHHHHHhh
Q psy12014         44 QPKYRCPL--CSYRAKQKIHLTTHMAI   68 (78)
Q Consensus        44 ~~~~~c~~--c~~~f~~~~~l~~h~~~   68 (78)
                      -+||+|..  |..+|....+|..|-+.
T Consensus        18 yrpyrcvhqgc~aaftiq~nlilhy~a   44 (61)
T d1x3ca1          18 YRPYRCVHQGCFAAFTIQQNLILHYQA   44 (61)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHH
T ss_pred             CCceeeeccchhhhhhhhhhHHHHHHH
Confidence            34566654  66777777777776554

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.97  E-value=0.28  Score=17.49  Aligned_cols=32  Identities=9%  Similarity=0.128  Sum_probs=19.1

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCcccccC
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYRAKQ   58 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~f~~   58 (78)
                      ..|..|+..|-        ...... +.+-.|..|+..+.+
T Consensus         3 r~C~~cG~~Yh--------~~~~pp-k~~g~CD~cg~~L~q   34 (38)
T d1akya2           3 LIHPASGRSYH--------KIFNPP-KEDMKDDVTGEALVQ   34 (38)
T ss_dssp             EECTTTCCEEE--------TTTBCC-SSTTBCTTTCCBCBC
T ss_pred             cCCcCccchhh--------hhccCc-CcCCccCCCCCEeee
Confidence            45777777663        233344 445678888765443

>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.69  E-value=0.23  Score=17.37  Aligned_cols=29  Identities=17%  Similarity=0.419  Sum_probs=17.4

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYR   55 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~   55 (78)
                      +.|..|+..|-        ...... +.+-.|+.|+..
T Consensus         3 r~C~~CG~~Yh--------~~~~pP-k~~g~CD~cG~~   31 (35)
T d1zina2           3 RICRNCGATYH--------LIFHPP-AKPGVCDKCGGE   31 (35)
T ss_dssp             EEETTTCCEEE--------TTTBCC-SSTTBCTTTCCB
T ss_pred             cCCcCcCchhc--------cccCCC-CCCCcCCCCCCC
Confidence            45777777663        233444 445678888754

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.51  E-value=0.7  Score=20.84  Aligned_cols=28  Identities=18%  Similarity=0.282  Sum_probs=20.0

Q ss_pred             CCceecCCchhhcCCHHHHHHHhhcccC
Q psy12014         15 GGLFSCSDCSRVYKKKASLTRHQTYECG   42 (78)
Q Consensus        15 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~   42 (78)
                      +.+-.|.-|...|.....+..|++...+
T Consensus        13 ~~~~~CLFCd~~f~s~~~~l~H~k~~H~   40 (121)
T d1wira_          13 RQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             cccceecccCCccCCHHHHHHHHHHhhC
Confidence            3455688888888887777778776554

>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus globisporus [TaxId: 1459]

Probab=80.96  E-value=0.28  Score=17.12  Aligned_cols=29  Identities=17%  Similarity=0.281  Sum_probs=16.9

Q ss_pred             eecCCchhhcCCHHHHHHHhhcccCCCCCcccCCCccc
Q psy12014         18 FSCSDCSRVYKKKASLTRHQTYECGQQPKYRCPLCSYR   55 (78)
Q Consensus        18 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~c~~c~~~   55 (78)
                      +.|..|+..|-        ...... ..+-.|+.|+..
T Consensus         3 ~~C~~CG~~Yh--------~~~~pP-k~~g~CD~cg~~   31 (35)
T d1s3ga2           3 RICKVCGTSYH--------LLFNPP-QVEGKCDKDGGE   31 (35)
T ss_dssp             EEETTTCCEEE--------TTTBCC-SBTTBCTTTCCB
T ss_pred             cCCcCcCchhc--------cccCCC-CCCCccCCCCCC
Confidence            45777777663        233334 445678888753

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.28  E-value=0.76  Score=15.77  Aligned_cols=23  Identities=26%  Similarity=0.570  Sum_probs=17.2

Q ss_pred             CceecCCchhhcCCHHHHHHHhh
Q psy12014         16 GLFSCSDCSRVYKKKASLTRHQT   38 (78)
Q Consensus        16 ~~~~c~~c~~~f~~~~~l~~h~~   38 (78)
                      +-|.|+.|-+-..+...+.+|+.
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHH
Confidence            45778888887777777877765