Psyllid ID: psy12015

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90------
Protein Sequence
MLVCLCVMFVRKGTNTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKHY
Secondary Structure (PSIPRED)
cEEEEEEEEEEEccccccccEEEEEcccccccccccccccccEEccccccccccccHHHccccccccccccccccccccccccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEcccccccccEEEEEccccccccccccccccccccccccccEEEEccHHHHHEEHcccccccccccccccHHHcHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MLVCLCVMFvrkgtntkldfgvirnssvdkslntNVLTVHIdlkcdvcekgyryktglwrhkkfecgqepkyqcphcphrskhkahlTTHMAIKHY
Flexible Loop (DISEMBL)
MLVCLCVMFvrkgtntkldfgvirnssvdkslntnvltvhidlkcdvcEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKHY
Low Complexity Region (SEG)
MLVCLCVMFVRKGTNTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKHY
Disordered region (IsUnstruct)
*LVCLCVMFVRKGTNTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC*******************
Disordered Region (DISOPRED)
*L*C*C*MFVR********************************KCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH*
Disordered Region (DISEMBL)
MLVCLCVMFVRKGTNTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP************TTHMAIKHY
Disordered Region (DISPRO)
MLVCLCVMFVRKGTNTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMA****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLVCLCVMFVRKGTNTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKHY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	96	2.2.26 [Sep-21-2011]
Q7KQZ4	787	Longitudinals lacking pro	no	N/A	0.531	0.064	0.470	7e-11
P42283	891	Longitudinals lacking pro	no	N/A	0.541	0.058	0.452	9e-10
Q9V5M3	878	Longitudinals lacking pro	no	N/A	0.375	0.041	0.578	2e-09
Q867Z4	970	Longitudinals lacking pro	no	N/A	0.531	0.052	0.403	8e-07
P28166	1054	Zinc finger protein 1 OS=	no	N/A	0.468	0.042	0.5	2e-06
G5EBU4	596	Zinc finger E-box-binding	yes	N/A	0.489	0.078	0.395	1e-05
Q9Z1D9	521	Zinc finger protein 394 O	yes	N/A	0.479	0.088	0.425	1e-05
Q6PGE4	1016	Zinc finger protein 316 O	no	N/A	0.5	0.047	0.408	7e-05
Q5ZM39	708	B-cell lymphoma 6 protein	yes	N/A	0.687	0.093	0.391	0.0001
Q7Z7K2	595	Zinc finger protein 467 O	yes	N/A	0.5	0.080	0.428	0.0001

>sp|Q7KQZ4|LOLA3_DROME Longitudinals lacking protein, isoforms A/B/D/L OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 35/51 (68%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C VC + Y+ K+ L  H+K+ECG+EP++QCP C +R+K K H+  HM   H
Sbjct: 687 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMH 737

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.
Drosophila melanogaster (taxid: 7227)

>sp|P42283|LOLA1_DROME Longitudinals lacking protein, isoform G OS=Drosophila melanogaster GN=lola PE=1 SV=2

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%)

Query: 44  KCDVCEKGYRYKTGLWRHKKFECG-QEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           +C  C K YR+K+ L RH+  ECG +EP +QCP+CP++SK + +L  H+   H
Sbjct: 792 ECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGVHVRKHH 844

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q9V5M3|LOLA6_DROME Longitudinals lacking protein, isoforms N/O/W/X/Y OS=Drosophila melanogaster GN=lola PE=1 SV=3

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/38 (57%), Positives = 27/38 (71%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSK 82
           C+VC K Y+ K  L RHK +ECG EP  +CPHCPH+ K
Sbjct: 711 CNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCK 748

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECG-QEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C  C K YR+K+ L RH+  ECG +EP + CP+C +++K + +L  H+   H
Sbjct: 905 CRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHVRKHH 956

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|P28166|ZFH1_DROME Zinc finger protein 1 OS=Drosophila melanogaster GN=zfh1 PE=1 SV=2

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 45   CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTH 90
            CD C+K +  ++ L RHK    GQ P YQC  CP   KHK HLT H
Sbjct: 969  CDQCDKAFAKQSSLARHKYEHSGQRP-YQCIECPKAFKHKHHLTEH 1013

Involved in the development of the embryonic central nervous system, embryonic mesoderm and adult musculature.

Drosophila melanogaster (taxid: 7227)

>sp|G5EBU4|ZAG1_CAEEL Zinc finger E-box-binding homebox protein zag-1 OS=Caenorhabditis elegans GN=zag-1 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 44  KCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHM 91
           KCD+CEK +++K  L  HK+   G++P +QC  C  R  H    + HM
Sbjct: 510 KCDICEKAFKHKHHLTEHKRLHSGEKP-FQCDKCLKRFSHSGSYSQHM 556

Down-regulates expression of genes involved in either the synthesis or reuptake of serotonin, dopamine and GABA. Acts as a transcriptional repressor to regulate multiple, discrete, neuron-specific aspects of terminal differentiation, including cell migration, axonal development and gene expression. Required for axon guidance. Involved in the proper development of the pharynx. Directly represses its own transcription by interacting with conserved E-box sequence motifs 5'-CACCTG-3' in its own promoter.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9Z1D9|ZN394_MOUSE Zinc finger protein 394 OS=Mus musculus GN=Znf394 PE=2 SV=3

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)

Query: 44  KCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTH 90
           KCD CEKG+R ++ L++H++   G++P YQC  C  R    A L  H
Sbjct: 328 KCDSCEKGFRQRSDLFKHQRIHTGEKP-YQCQECGKRFSQSAALVKH 373

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q6PGE4|ZF316_MOUSE Zinc finger protein 316 OS=Mus musculus GN=Znf316 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAI 93
           CD C KG+ Y++ L  H++   G++P + CP C  R  +K+HL TH  I
Sbjct: 370 CDECGKGFVYRSHLAIHQRTHTGEKP-FPCPDCGKRFVYKSHLVTHRRI 417

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q5ZM39|BCL6_CHICK B-cell lymphoma 6 protein homolog OS=Gallus gallus GN=BCL6 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 27  SVDKSLNTNVLTVHID--LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHK 84
           S + SL  + L VH D   KCD C+  +RYK  L  HK    G++P Y+C  C  +    
Sbjct: 530 SEEASLKRHSLQVHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRP 588

Query: 85  AHLTTHMAI 93
           A+L TH  I
Sbjct: 589 ANLKTHTRI 597

Transcriptional repressor which is required for germinal center formation and antibody affinity maturation. Probably plays an important role in lymphomagenesis.

Gallus gallus (taxid: 9031)

>sp|Q7Z7K2|ZN467_HUMAN Zinc finger protein 467 OS=Homo sapiens GN=ZNF467 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAI 93
           C  CEK +R KT L RH++   G+ P YQC  C     HK HL  H  +
Sbjct: 274 CTECEKRFRKKTHLIRHQRIHTGERP-YQCAQCARSFTHKQHLVRHQRV 321

Transcription factor that promotes adipocyte differentiation and suppresses osteoblast differentiation in the bone marrow. Enhances the osteoclast-supporting ability of stromal cells. Binds with STAT3 the consensus sequence 5'-CTTCTGGGAAGA-3' of the acute phase response element (APRE). Transactivates several promoters including FOS, OSM and PPARG. Recruits a histone deacetylase complex.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
45552567	771	longitudinals lacking, isoform W [Drosop	0.531	0.066	0.529	2e-11
195026424	319	GH20627 [Drosophila grimshawi] gi|193902	0.531	0.159	0.549	8e-11
16648060	331	GH08307p [Drosophila melanogaster]	0.531	0.154	0.529	2e-10
195383676	685	GJ20138 [Drosophila virilis] gi|19414534	0.479	0.067	0.553	2e-09
24652482	787	longitudinals lacking, isoform C [Drosop	0.531	0.064	0.470	3e-09
29539411	786	Lola protein isoform L [Drosophila melan	0.531	0.064	0.470	3e-09
195333169	335	GM20512 [Drosophila sechellia] gi|194125	0.531	0.152	0.470	4e-09
195582220	335	GD25971 [Drosophila simulans] gi|1941929	0.531	0.152	0.470	4e-09
194884229	346	GG22734 [Drosophila erecta] gi|190659385	0.531	0.147	0.470	4e-09
195483702	341	GE13093 [Drosophila yakuba] gi|194176498	0.531	0.149	0.470	5e-09

>gi|45552567|ref|NP_995806.1| longitudinals lacking, isoform W [Drosophila melanogaster] gi|29539421|dbj|BAC67593.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539461|dbj|BAC67613.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539501|dbj|BAC67633.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539541|dbj|BAC67653.1| Lola protein isoform Q [Drosophila melanogaster] gi|45445597|gb|AAS64876.1| longitudinals lacking, isoform W [Drosophila melanogaster]

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/51 (52%), Positives = 35/51 (68%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C+VC K Y+ K  L RHK +ECG EP  +CPHCPH+ K+++ L  HM  KH
Sbjct: 711 CNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCKYRSDLRKHMNQKH 761

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195026424|ref|XP_001986253.1| GH20627 [Drosophila grimshawi] gi|193902253|gb|EDW01120.1| GH20627 [Drosophila grimshawi]

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C+VC K Y+ K  L RHK +ECG EP  +CPHCPH+ K+K+ L  HM  KH
Sbjct: 258 CNVCGKTYKIKGSLKRHKNYECGVEPTLKCPHCPHKCKYKSDLRKHMNQKH 308

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|16648060|gb|AAL25295.1| GH08307p [Drosophila melanogaster]

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/51 (52%), Positives = 35/51 (68%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C+VC K Y+ K  L RHK +ECG EP  +CPHCPH+ K+++ L  HM  KH
Sbjct: 271 CNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCKYRSDLRKHMNQKH 321

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195383676|ref|XP_002050552.1| GJ20138 [Drosophila virilis] gi|194145349|gb|EDW61745.1| GJ20138 [Drosophila virilis]

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/47 (55%), Positives = 33/47 (70%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHM 91
           C+VC K Y+ K  L RHK +ECG EP  +CPHCPH+ K+K+ L  HM
Sbjct: 117 CNVCGKTYKIKGSLKRHKNYECGVEPTLKCPHCPHKCKYKSDLRKHM 163

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24652482|ref|NP_724946.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|78711864|ref|NP_724949.2| longitudinals lacking, isoform B [Drosophila melanogaster] gi|73920870|sp|Q7KQZ4.1|LOLA3_DROME RecName: Full=Longitudinals lacking protein, isoforms A/B/D/L gi|7303724|gb|AAF58773.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|71911713|gb|AAF58776.3| longitudinals lacking, isoform B [Drosophila melanogaster]

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 35/51 (68%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C VC + Y+ K+ L  H+K+ECG+EP++QCP C +R+K K H+  HM   H
Sbjct: 687 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMH 737

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|29539411|dbj|BAC67588.1| Lola protein isoform L [Drosophila melanogaster] gi|29539451|dbj|BAC67608.1| Lola protein isoform L [Drosophila melanogaster] gi|29539491|dbj|BAC67628.1| Lola protein isoform L [Drosophila melanogaster] gi|29539531|dbj|BAC67648.1| Lola protein isoform L [Drosophila melanogaster]

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 35/51 (68%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C VC + Y+ K+ L  H+K+ECG+EP++QCP C +R+K K H+  HM   H
Sbjct: 686 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMH 736

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195333169|ref|XP_002033264.1| GM20512 [Drosophila sechellia] gi|194125234|gb|EDW47277.1| GM20512 [Drosophila sechellia]

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 35/51 (68%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C VC + Y+ K+ L  H+K+ECG+EP++QCP C +R+K K H+  HM   H
Sbjct: 235 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMH 285

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195582220|ref|XP_002080926.1| GD25971 [Drosophila simulans] gi|194192935|gb|EDX06511.1| GD25971 [Drosophila simulans]

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 35/51 (68%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C VC + Y+ K+ L  H+K+ECG+EP++QCP C +R+K K H+  HM   H
Sbjct: 235 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMH 285

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194884229|ref|XP_001976198.1| GG22734 [Drosophila erecta] gi|190659385|gb|EDV56598.1| GG22734 [Drosophila erecta]

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 35/51 (68%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C VC + Y+ K+ L  H+K+ECG+EP++QCP C +R+K K H+  HM   H
Sbjct: 246 CPVCGRIYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMH 296

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195483702|ref|XP_002090397.1| GE13093 [Drosophila yakuba] gi|194176498|gb|EDW90109.1| GE13093 [Drosophila yakuba]

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 35/51 (68%)

Query: 45  CDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
           C VC + Y+ K+ L  H+K+ECG+EP++QCP C +R+K K H+  HM   H
Sbjct: 241 CPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMH 291

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
UNIPROTKB|P80944	148	ZFX "Zinc finger X-chromosomal	0.656	0.425	0.373	5.3e-08
UNIPROTKB|Q29419	148	ZFY "Zinc finger Y-chromosomal	0.656	0.425	0.373	5.3e-08
UNIPROTKB|O42424	179	ZNF6 "ZNF6 protein" [Gallus ga	0.656	0.351	0.373	1.1e-07
RGD|1307738	667	Zfp54 "zinc finger protein 54"	0.541	0.077	0.456	1.4e-07
UNIPROTKB|F1NBN7	708	BCL6 "B-cell lymphoma 6 protei	0.687	0.093	0.391	4e-07
UNIPROTKB|Q5ZM39	708	BCL6 "B-cell lymphoma 6 protei	0.687	0.093	0.391	4e-07
ZFIN|ZDB-GENE-040426-1696	718	bcl6a "B-cell CLL/lymphoma 6a	0.666	0.089	0.373	5.3e-07
ZFIN|ZDB-GENE-030131-6213	509	zgc:174890 "zgc:174890" [Danio	0.718	0.135	0.319	5.4e-07
UNIPROTKB|E2RTF3	704	RTP2 "Uncharacterized protein"	0.687	0.093	0.376	6.5e-07
UNIPROTKB|E1B8E6	706	BCL6 "Uncharacterized protein"	0.687	0.093	0.376	6.5e-07

UNIPROTKB|P80944 ZFX "Zinc finger X-chromosomal protein" [Sus scrofa (taxid:9823)]

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 25/67 (37%), Positives = 39/67 (58%)

Query:    32 LNTNVLTVH---IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLT 88
             LN ++L VH       C  C KG+R+ + L +H +   G++P YQC +C +RS   ++L 
Sbjct:    62 LNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYCEYRSADSSNLK 120

Query:    89 THMAIKH 95
             TH+  KH
Sbjct:   121 THVKTKH 127

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q29419 ZFY "Zinc finger Y-chromosomal protein" [Sus scrofa (taxid:9823)]

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 25/67 (37%), Positives = 39/67 (58%)

Query:    32 LNTNVLTVH---IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLT 88
             LN ++L VH       C  C KG+R+ + L +H +   G++P YQC +C +RS   ++L 
Sbjct:    62 LNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYCEYRSADSSNLK 120

Query:    89 THMAIKH 95
             TH+  KH
Sbjct:   121 THVKTKH 127

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|O42424 ZNF6 "ZNF6 protein" [Gallus gallus (taxid:9031)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 25/67 (37%), Positives = 38/67 (56%)

Query:    32 LNTNVLTVH---IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLT 88
             LN ++L VH       C  C KG+R+ + L +H +   G++P YQC HC  R   +++L 
Sbjct:    85 LNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKP-YQCQHCVFRCADQSNLK 143

Query:    89 THMAIKH 95
             TH+  KH
Sbjct:   144 THIKTKH 150

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

RGD|1307738 Zfp54 "zinc finger protein 54" [Rattus norvegicus (taxid:10116)]

 Score = 131 (51.2 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 26/57 (45%), Positives = 33/57 (57%)

Query:    44 KCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCP---HRSKH-KAHLTTHMAIKHY 96
             KC  C+K Y Y+TGL RH+K    +E +Y C HC    H+  H K+H T H A K Y
Sbjct:   355 KCKECDKSYAYRTGLKRHQKIHTAKE-RYSCQHCGKVFHQLSHFKSHFTVHSAEKPY 410

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NBN7 BCL6 "B-cell lymphoma 6 protein homolog" [Gallus gallus (taxid:9031)]

 Score = 116 (45.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
 Identities = 27/69 (39%), Positives = 36/69 (52%)

Query:    27 SVDKSLNTNVLTVHID--LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHK 84
             S + SL  + L VH D   KCD C+  +RYK  L  HK    G++P Y+C  C  +    
Sbjct:   530 SEEASLKRHSLQVHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRP 588

Query:    85 AHLTTHMAI 93
             A+L TH  I
Sbjct:   589 ANLKTHTRI 597

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000060 "protein import into nucleus, translocation" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001953 "negative regulation of cell-matrix adhesion" evidence=IEA

GO:0002467 "germinal center formation" evidence=IEA

GO:0002829 "negative regulation of type 2 immune response" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005657 "replication fork" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030183 "B cell differentiation" evidence=IEA

GO:0030308 "negative regulation of cell growth" evidence=IEA

GO:0030890 "positive regulation of B cell proliferation" evidence=IEA

GO:0031490 "chromatin DNA binding" evidence=IEA

GO:0032319 "regulation of Rho GTPase activity" evidence=IEA

GO:0032764 "negative regulation of mast cell cytokine production" evidence=IEA

GO:0035024 "negative regulation of Rho protein signal transduction" evidence=IEA

GO:0042092 "type 2 immune response" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043380 "regulation of memory T cell differentiation" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045629 "negative regulation of T-helper 2 cell differentiation" evidence=IEA

GO:0048294 "negative regulation of isotype switching to IgE isotypes" evidence=IEA

GO:0048821 "erythrocyte development" evidence=IEA

GO:0050727 "regulation of inflammatory response" evidence=IEA

GO:0051272 "positive regulation of cellular component movement" evidence=IEA

UNIPROTKB|Q5ZM39 BCL6 "B-cell lymphoma 6 protein homolog" [Gallus gallus (taxid:9031)]

 Score = 116 (45.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
 Identities = 27/69 (39%), Positives = 36/69 (52%)

Query:    27 SVDKSLNTNVLTVHID--LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHK 84
             S + SL  + L VH D   KCD C+  +RYK  L  HK    G++P Y+C  C  +    
Sbjct:   530 SEEASLKRHSLQVHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRP 588

Query:    85 AHLTTHMAI 93
             A+L TH  I
Sbjct:   589 ANLKTHTRI 597

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0000060 "protein import into nucleus, translocation" evidence=ISS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005657 "replication fork" evidence=ISS

GO:0006974 "response to DNA damage stimulus" evidence=ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISS

GO:0030308 "negative regulation of cell growth" evidence=ISS

GO:0043065 "positive regulation of apoptotic process" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=ISS

GO:0048294 "negative regulation of isotype switching to IgE isotypes" evidence=ISS

GO:0048821 "erythrocyte development" evidence=ISS

GO:0050727 "regulation of inflammatory response" evidence=ISS

GO:0001953 "negative regulation of cell-matrix adhesion" evidence=ISS

GO:0002467 "germinal center formation" evidence=ISS

GO:0002829 "negative regulation of type 2 immune response" evidence=ISS

GO:0003682 "chromatin binding" evidence=ISS

GO:0007266 "Rho protein signal transduction" evidence=ISS

GO:0007283 "spermatogenesis" evidence=ISS

GO:0008104 "protein localization" evidence=ISS

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

GO:0030036 "actin cytoskeleton organization" evidence=ISS

GO:0030183 "B cell differentiation" evidence=ISS

GO:0030890 "positive regulation of B cell proliferation" evidence=ISS

GO:0032319 "regulation of Rho GTPase activity" evidence=ISS

GO:0035024 "negative regulation of Rho protein signal transduction" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

GO:0043380 "regulation of memory T cell differentiation" evidence=ISS

GO:0051272 "positive regulation of cellular component movement" evidence=ISS

GO:0000902 "cell morphogenesis" evidence=ISS

GO:0032764 "negative regulation of mast cell cytokine production" evidence=ISS

ZFIN|ZDB-GENE-040426-1696 bcl6a "B-cell CLL/lymphoma 6a (zinc finger protein 51)" [Danio rerio (taxid:7955)]

 Score = 115 (45.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
 Identities = 25/67 (37%), Positives = 36/67 (53%)

Query:    29 DKSLNTNVLTVHID--LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAH 86
             +++L  + L VH D   KCD C+  +RYK  L  HK    G++P Y+C  C  +    A+
Sbjct:   542 EEALKRHTLQVHSDKPYKCDRCQAAFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRPAN 600

Query:    87 LTTHMAI 93
             L TH  I
Sbjct:   601 LKTHTRI 607

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-030131-6213 zgc:174890 "zgc:174890" [Danio rerio (taxid:7955)]

 Score = 124 (48.7 bits), Expect = 5.4e-07, P = 5.4e-07
 Identities = 23/72 (31%), Positives = 40/72 (55%)

Query:    24 RNSSVDKSLNTNVL--TVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRS 81
             +N S+ K L  ++   +  + ++CDVC K +  K  L  HK+   G+ P Y+CPHC    
Sbjct:   259 KNFSLSKELKVHMKRHSGELRVQCDVCNKSFSTKANLEVHKRIHTGERP-YKCPHCEKSF 317

Query:    82 KHKAHLTTHMAI 93
              +K+++  H+ I
Sbjct:   318 NYKSYMKNHIRI 329

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E2RTF3 RTP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 114 (45.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
 Identities = 26/69 (37%), Positives = 35/69 (50%)

Query:    27 SVDKSLNTNVLTVHID--LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHK 84
             S + SL  + L  H D   KCD C+  +RYK  L  HK    G++P Y+C  C  +    
Sbjct:   528 SEEASLKRHTLQTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRP 586

Query:    85 AHLTTHMAI 93
             A+L TH  I
Sbjct:   587 ANLKTHTRI 595

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E1B8E6 BCL6 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 114 (45.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
 Identities = 26/69 (37%), Positives = 35/69 (50%)

Query:    27 SVDKSLNTNVLTVHID--LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHK 84
             S + SL  + L  H D   KCD C+  +RYK  L  HK    G++P Y+C  C  +    
Sbjct:   528 SEEASLKRHTLQTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRP 586

Query:    85 AHLTTHMAI 93
             A+L TH  I
Sbjct:   587 ANLKTHTRI 595

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

GO:0002829 "negative regulation of type 2 immune response" evidence=ISS

GO:0005657 "replication fork" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISS

GO:0043065 "positive regulation of apoptotic process" evidence=ISS

GO:0030308 "negative regulation of cell growth" evidence=ISS

GO:0006974 "response to DNA damage stimulus" evidence=ISS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0000060 "protein import into nucleus, translocation" evidence=ISS

GO:0050727 "regulation of inflammatory response" evidence=ISS

GO:0048821 "erythrocyte development" evidence=ISS

GO:0048294 "negative regulation of isotype switching to IgE isotypes" evidence=ISS

GO:0045629 "negative regulation of T-helper 2 cell differentiation" evidence=ISS

GO:0043380 "regulation of memory T cell differentiation" evidence=ISS

GO:0042092 "type 2 immune response" evidence=ISS

GO:0035024 "negative regulation of Rho protein signal transduction" evidence=ISS

GO:0032764 "negative regulation of mast cell cytokine production" evidence=ISS

GO:0032319 "regulation of Rho GTPase activity" evidence=ISS

GO:0030890 "positive regulation of B cell proliferation" evidence=ISS

GO:0030036 "actin cytoskeleton organization" evidence=ISS

GO:0008104 "protein localization" evidence=ISS

GO:0007283 "spermatogenesis" evidence=ISS

GO:0003682 "chromatin binding" evidence=ISS

GO:0003677 "DNA binding" evidence=ISS

GO:0002467 "germinal center formation" evidence=ISS

GO:0000902 "cell morphogenesis" evidence=ISS

GO:0051272 "positive regulation of cellular component movement" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

GO:0030183 "B cell differentiation" evidence=ISS

GO:0007266 "Rho protein signal transduction" evidence=ISS

GO:0001953 "negative regulation of cell-matrix adhesion" evidence=ISS

GO:0031490 "chromatin DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	96
KOG2462|consensus	279		99.77
KOG2462|consensus	279		99.77
KOG3623|consensus	1007		99.46
KOG3576|consensus	267		99.36
KOG1074|consensus	958		99.21
KOG3623|consensus	1007		99.18
KOG3576|consensus	267		99.1
PHA02768	55	hypothetical protein; Provisional	99.04
KOG1074|consensus	958		99.02
PHA00733	128	hypothetical protein	99.01
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.75
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.71
KOG3608|consensus	467		98.53
KOG3608|consensus	467		98.46
PHA00732	79	hypothetical protein	98.44
PHA00616	44	hypothetical protein	98.26
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.25
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.2
PHA00616	44	hypothetical protein	98.14
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.04
KOG3993|consensus	500		98.03
PHA02768	55	hypothetical protein; Provisional	97.98
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.9
PLN03086	567	PRLI-interacting factor K; Provisional	97.87
PHA00733	128	hypothetical protein	97.87
PLN03086	567	PRLI-interacting factor K; Provisional	97.82
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.74
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.73
smart00355	26	ZnF_C2H2 zinc finger.	97.46
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.44
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.37
PRK04860	160	hypothetical protein; Provisional	97.31
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.17
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.15
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.14
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.11
KOG3993|consensus	500		96.9
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.81
smart00355	26	ZnF_C2H2 zinc finger.	96.73
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.68
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.4
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.08
PHA00732	79	hypothetical protein	95.9
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.16
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.55
COG5189	423	SFP1 Putative transcriptional repressor regulating	92.86
PRK04860	160	hypothetical protein; Provisional	92.84
COG5048	467	FOG: Zn-finger [General function prediction only]	92.77
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	92.5
KOG1146|consensus	1406		92.39
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	90.73
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	90.52
COG1592	166	Rubrerythrin [Energy production and conversion]	90.42
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	90.29
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	90.22
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	90.2
COG4049	65	Uncharacterized protein containing archaeal-type C	90.04
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	89.98
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	88.48
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	88.4
KOG2186|consensus	276		87.95
smart00531	147	TFIIE Transcription initiation factor IIE.	87.41
COG5048	467	FOG: Zn-finger [General function prediction only]	87.18
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	86.96
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	86.28
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	86.28
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	86.13
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	85.99
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	85.8
KOG2893|consensus	341		85.73
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	85.15
PRK06266	178	transcription initiation factor E subunit alpha; V	85.05
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	84.82
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	84.48
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	84.04
PHA00626	59	hypothetical protein	83.04
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	82.68
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	81.61
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	81.07
PF14353	128	CpXC: CpXC protein	80.37

>KOG2462|consensus

Probab=99.77  E-value=2.2e-19  Score=106.88  Aligned_cols=72  Identities=21%  Similarity=0.472  Sum_probs=36.2

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      +++.+.+...|+.|+  ++|+  .+++|..||+.|+..|-|..|+|+|+|++| |.|+.|+++|.++++|.-|+++|
T Consensus       167 C~K~YvSmpALkMHi--rTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKP-F~C~hC~kAFADRSNLRAHmQTH  238 (279)
T KOG2462|consen  167 CGKVYVSMPALKMHI--RTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKP-FSCPHCGKAFADRSNLRAHMQTH  238 (279)
T ss_pred             CCceeeehHHHhhHh--hccC--CCcccccccccccchHHhhcccccccCCCC-ccCCcccchhcchHHHHHHHHhh
Confidence            444444444455554  4444  344555555555555555555555555444 55555555555555555555544

>KOG2462|consensus

Probab=99.77  E-value=1.5e-19  Score=107.61  Aligned_cols=76  Identities=18%  Similarity=0.260  Sum_probs=71.5

Q ss_pred             ccccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhh
Q psy12015         15 NTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        15 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      +..+|+.|++.=-|+.|+  ++|+|||||.|..|++.|...++|..|+++|.+.++ |+|+.|+|.|...+-|++|...
T Consensus       190 C~iCGKaFSRPWLLQGHi--RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~-~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  190 CGICGKAFSRPWLLQGHI--RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKK-HQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cccccccccchHHhhccc--ccccCCCCccCCcccchhcchHHHHHHHHhhcCCcc-ccCcchhhHHHHHHHHHHhhhh
Confidence            345899999998899999  999999999999999999999999999999999998 9999999999999999999764

>KOG3623|consensus

Probab=99.46  E-value=1.1e-14  Score=96.53  Aligned_cols=72  Identities=26%  Similarity=0.540  Sum_probs=69.2

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHh
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r   92 (96)
                      +++.|...++|..|.  --|+|.+||.|..|.+.|..+..|+.|.|.|.|++| |+|+.|+|.|.......+|+.
T Consensus       900 CDK~FqKqSSLaRHK--YEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKP-fQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  900 CDKAFQKQSSLARHK--YEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKP-FQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             HHHHHHhhHHHHHhh--hhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCc-chhhhhhhhcccccchHhhhc
Confidence            889999999999999  999999999999999999999999999999999999 999999999999999999875

>KOG3576|consensus

Probab=99.36  E-value=6e-14  Score=81.03  Aligned_cols=75  Identities=21%  Similarity=0.408  Sum_probs=68.5

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +++.|....-|..|+  ..|...+.+.|..||+.|...-+|.+|.++|+|.+| |+|..|+++|.++..|..|.+--|
T Consensus       123 CgK~F~lQRmlnrh~--kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrp-ykc~~c~kaftqrcsleshl~kvh  197 (267)
T KOG3576|consen  123 CGKKFGLQRMLNRHL--KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRP-YKCSLCEKAFTQRCSLESHLKKVH  197 (267)
T ss_pred             hhhhhhHHHHHHHHh--hhccHHHHHHHhhccCcccchhhhhhhhccccCccc-cchhhhhHHHHhhccHHHHHHHHc
Confidence            888899888899999  889988999999999999999999999999999888 999999999999999998887543

>KOG1074|consensus

Probab=99.21  E-value=3e-12  Score=86.02  Aligned_cols=78  Identities=19%  Similarity=0.358  Sum_probs=68.5

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCC---ceeCC---CCCCCCCCchhHHH
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEP---KYQCP---HCPHRSKHKAHLTT   89 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~---~~~C~---~c~~~f~~~~~l~~   89 (96)
                      .-|.+-.+..+.|+.|+  ++|+||+||+|..|++.|..+.+|..|+.+|...-+   .+.|+   +|.+.|.....+..
T Consensus       609 iiC~rVlSC~saLqmHy--rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQ  686 (958)
T KOG1074|consen  609 IICLRVLSCPSALQMHY--RTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQ  686 (958)
T ss_pred             eeeeecccchhhhhhhh--hcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccc
Confidence            33667788999999999  999999999999999999999999999998876322   27798   89999999999999


Q ss_pred             HHhhcC
Q psy12015         90 HMAIKH   95 (96)
Q Consensus        90 h~r~~h   95 (96)
                      |+|+|.
T Consensus       687 hIriH~  692 (958)
T KOG1074|consen  687 HIRIHL  692 (958)
T ss_pred             eEEeec
Confidence            999874

>KOG3623|consensus

Probab=99.18  E-value=5.4e-12  Score=84.05  Aligned_cols=74  Identities=22%  Similarity=0.628  Sum_probs=64.7

Q ss_pred             cccccccccchhhhhhhcccccc-------------ccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCC
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLT-------------VHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSK   82 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~-------------~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~   82 (96)
                      .-+.-+|.++..|..|+  .+|.             ..+.|+|..|++.|..+..|..|+|+|.|++| |+|+.|+|.|.
T Consensus       244 ~lCsytFAyRtQLErhm--~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKP-feCpnCkKRFS  320 (1007)
T KOG3623|consen  244 MLCSYTFAYRTQLERHM--QLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKP-FECPNCKKRFS  320 (1007)
T ss_pred             hhhhhhhhhHHHHHHHH--HhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCC-cCCcccccccc
Confidence            33667889999999998  5555             24579999999999999999999999999999 99999999999


Q ss_pred             CchhHHHHHh
Q psy12015         83 HKAHLTTHMA   92 (96)
Q Consensus        83 ~~~~l~~h~r   92 (96)
                      ....+..|+-
T Consensus       321 HSGSySSHmS  330 (1007)
T KOG3623|consen  321 HSGSYSSHMS  330 (1007)
T ss_pred             cCCccccccc
Confidence            9999888874

>KOG3576|consensus

Probab=99.10  E-value=7.2e-11  Score=68.50  Aligned_cols=77  Identities=23%  Similarity=0.350  Sum_probs=66.7

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcC-----------CCCceeCCCCCCCCCCc
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECG-----------QEPKYQCPHCPHRSKHK   84 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~-----------~~~~~~C~~c~~~f~~~   84 (96)
                      +.++++|.-..+|+.|.  ++|+|.+||+|..|++.|.....|..|.+--.|           .+- |.|..||..-...
T Consensus       149 t~cgkgfndtfdlkrh~--rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl-~vcedcg~t~~~~  225 (267)
T KOG3576|consen  149 TFCGKGFNDTFDLKRHT--RTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKL-YVCEDCGYTSERP  225 (267)
T ss_pred             hhccCcccchhhhhhhh--ccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhhe-eeecccCCCCCCh
Confidence            45889999999999999  999999999999999999999999999874333           234 8999999998888


Q ss_pred             hhHHHHHhhcC
Q psy12015         85 AHLTTHMAIKH   95 (96)
Q Consensus        85 ~~l~~h~r~~h   95 (96)
                      ..+..|...+|
T Consensus       226 e~~~~h~~~~h  236 (267)
T KOG3576|consen  226 EVYYLHLKLHH  236 (267)
T ss_pred             hHHHHHHHhcC
Confidence            88888888766

>PHA02768 hypothetical protein; Provisional

Probab=99.04  E-value=9.8e-11  Score=54.64  Aligned_cols=43  Identities=14%  Similarity=0.336  Sum_probs=38.3

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhH
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHL   87 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l   87 (96)
                      -|+|+.|++.|+..+.|..|++.|.  ++ ++|..|++.|.+.+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~-~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TN-LKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Cc-ccCCcccceeccccee
Confidence            3789999999999999999999988  46 9999999999887665

>KOG1074|consensus

Probab=99.02  E-value=5.9e-11  Score=80.01  Aligned_cols=53  Identities=28%  Similarity=0.582  Sum_probs=48.8

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +++|..|++.|.+.+.|..|.|.|+|++| |+|.+||..|.++.+|..|...|+
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTGERP-fqCnvCG~~FSTkGNLKvH~~rH~  405 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTGERP-FQCNVCGNRFSTKGNLKVHFQRHR  405 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCCCCC-eeecccccccccccceeeeeeecc
Confidence            57799999999999999999999999999 999999999999999998887764

>PHA00733 hypothetical protein

Probab=99.01  E-value=5.8e-10  Score=61.19  Aligned_cols=55  Identities=18%  Similarity=0.423  Sum_probs=49.0

Q ss_pred             cccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         38 TVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        38 ~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .+++||.|..|++.|.....|..|++.+  ..+ |.|..|++.|.....|.+|++..|
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~-~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHS-KVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcC-ccCCCCCCccCCHHHHHHHHHHhc
Confidence            3478999999999999999999999875  246 999999999999999999998766

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.75  E-value=6.1e-09  Score=41.81  Aligned_cols=18  Identities=28%  Similarity=0.510  Sum_probs=8.8

Q ss_pred             ccccccCeeecccccccc
Q psy12015         35 NVLTVHIDLKCDVCEKGY   52 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f   52 (96)
                      ++|++++||.|+.|++.|
T Consensus         7 ~~H~~~k~~~C~~C~k~F   24 (26)
T PF13465_consen    7 RTHTGEKPYKCPYCGKSF   24 (26)
T ss_dssp             HHHSSSSSEEESSSSEEE
T ss_pred             hhcCCCCCCCCCCCcCee
Confidence            445555555555554444

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.71  E-value=5.8e-09  Score=41.88  Aligned_cols=26  Identities=35%  Similarity=0.828  Sum_probs=23.2

Q ss_pred             hHHHHhhhhcCCCCceeCCCCCCCCCC
Q psy12015         57 GLWRHKKFECGQEPKYQCPHCPHRSKH   83 (96)
Q Consensus        57 ~l~~h~~~~~~~~~~~~C~~c~~~f~~   83 (96)
                      +|..|++.|+|+++ |.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~-~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP-YKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSS-EEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCC-CCCCCCcCeeCc
Confidence            47899999999999 999999998863

...

>KOG3608|consensus

Probab=98.53  E-value=1.1e-08  Score=63.83  Aligned_cols=74  Identities=18%  Similarity=0.324  Sum_probs=60.7

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcC--CCCceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECG--QEPKYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~--~~~~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      +.+.+..++.|..|+  ++|++|+-..|..|++-|.....|-+|.+..+.  ..+ |.|..|.|.|.+...|..|.+.|
T Consensus       185 Ct~~~~~k~~LreH~--r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~-fqC~~C~KrFaTeklL~~Hv~rH  260 (467)
T KOG3608|consen  185 CTKHMGNKYRLREHI--RTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNS-FQCAQCFKRFATEKLLKSHVVRH  260 (467)
T ss_pred             hhhhhccHHHHHHHH--HhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCc-hHHHHHHHHHhHHHHHHHHHHHh
Confidence            566788899999999  999999999999999999999999999875333  334 88888888888877777776654

>KOG3608|consensus

Probab=98.46  E-value=1e-07  Score=59.63  Aligned_cols=72  Identities=21%  Similarity=0.399  Sum_probs=39.1

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC--CCCCCCCchhHHHHHh
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH--CPHRSKHKAHLTTHMA   92 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~--c~~~f~~~~~l~~h~r   92 (96)
                      ++.+.+..++|..|+. ..|...+||+|+.|...+..+++|.+|...|.. .. |+|..  |...+.....+.+|.+
T Consensus       269 Cdmtc~~~ssL~~H~r-~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~-~~-y~C~h~~C~~s~r~~~q~~~H~~  342 (467)
T KOG3608|consen  269 CDMTCSSASSLTTHIR-YRHSKDKPFKCDECDTRCVRESDLAKHVQVHSK-TV-YQCEHPDCHYSVRTYTQMRRHFL  342 (467)
T ss_pred             cccCCCChHHHHHHHH-hhhccCCCccccchhhhhccHHHHHHHHHhccc-cc-eecCCCCCcHHHHHHHHHHHHHH
Confidence            4455556666666663 345556666666666666666666666655542 22 44443  4444444444444443

>PHA00732 hypothetical protein

Probab=98.44  E-value=1.4e-07  Score=47.62  Aligned_cols=44  Identities=23%  Similarity=0.429  Sum_probs=29.0

Q ss_pred             eeeccccccccccchhHHHHhhh-hcCCCCceeCCCCCCCCCCchhHHHHHh
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKF-ECGQEPKYQCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~-~~~~~~~~~C~~c~~~f~~~~~l~~h~r   92 (96)
                      ||.|..|++.|.....+..|++. |.   + +.|+.|++.|.   .+..|.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~-~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---L-TKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---C-CccCCCCCEeC---Chhhhhc
Confidence            46677777777777777777763 43   2 56777777776   3455554

>PHA00616 hypothetical protein

Probab=98.26  E-value=3.4e-07  Score=40.88  Aligned_cols=34  Identities=18%  Similarity=0.131  Sum_probs=28.9

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      ||.|..||..|....++..|++.++|.++ +.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~-~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK-LTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc-cceeE
Confidence            57899999999999999999999998877 77653

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.25  E-value=4.9e-07  Score=35.01  Aligned_cols=22  Identities=36%  Similarity=0.762  Sum_probs=17.5

Q ss_pred             eeCCCCCCCCCCchhHHHHHhh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      |.|+.|++.|.++..|.+|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5778888888888888888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.20  E-value=1e-06  Score=34.19  Aligned_cols=24  Identities=38%  Similarity=0.818  Sum_probs=18.8

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|+.|++.|.+...|..|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            678888888999888888888876

...

>PHA00616 hypothetical protein

Probab=98.14  E-value=5.4e-07  Score=40.24  Aligned_cols=25  Identities=28%  Similarity=0.533  Sum_probs=23.6

Q ss_pred             ceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         71 KYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        71 ~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ||+|..||+.|...+.+..|++.||
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~h   25 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVH   25 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhc
Confidence            3899999999999999999999987

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.04  E-value=2.4e-06  Score=34.30  Aligned_cols=24  Identities=17%  Similarity=0.401  Sum_probs=17.9

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+|..|++.|....+|..|++.|+
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            777777777777777777777654

>KOG3993|consensus

Probab=98.03  E-value=2.1e-06  Score=54.93  Aligned_cols=54  Identities=19%  Similarity=0.519  Sum_probs=44.8

Q ss_pred             CeeeccccccccccchhHHHHhhhhcC---------------------------------CCCceeCCCCCCCCCCchhH
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECG---------------------------------QEPKYQCPHCPHRSKHKAHL   87 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~---------------------------------~~~~~~C~~c~~~f~~~~~l   87 (96)
                      ..|+|.+|++.|+...+|..|.|.|--                                 +.. |.|..|++.|.+..-|
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi-~~C~~C~KkFrRqAYL  372 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGI-FSCHTCGKKFRRQAYL  372 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCce-eecHHhhhhhHHHHHH
Confidence            368999999999999999988875532                                 113 8899999999999999


Q ss_pred             HHHHhhcC
Q psy12015         88 TTHMAIKH   95 (96)
Q Consensus        88 ~~h~r~~h   95 (96)
                      ..|+-+||
T Consensus       373 rKHqlthq  380 (500)
T KOG3993|consen  373 RKHQLTHQ  380 (500)
T ss_pred             HHhHHhhh
Confidence            99988876

>PHA02768 hypothetical protein; Provisional

Probab=97.98  E-value=2.6e-06  Score=39.86  Aligned_cols=42  Identities=14%  Similarity=0.006  Sum_probs=35.7

Q ss_pred             cccccccccccchhhhhhhccccccccCeeeccccccccccchhHH
Q psy12015         14 TNTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLW   59 (96)
Q Consensus        14 ~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~   59 (96)
                      .+..+++.|+..+.|..|+  ++|+  +++.|..|++.|...+.+.
T Consensus         7 ~C~~CGK~Fs~~~~L~~H~--r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          7 ECPICGEIYIKRKSMITHL--RKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             CcchhCCeeccHHHHHHHH--HhcC--CcccCCcccceecccceeE
Confidence            4566899999999999999  8888  6889999999998766553

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.90  E-value=2.2e-05  Score=36.84  Aligned_cols=51  Identities=25%  Similarity=0.597  Sum_probs=38.2

Q ss_pred             eeeccccccccccchhHHHHhhh-hcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKF-ECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~-~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|.|+.|++.|. ...|..|... |..+...+.|++|...+.  .+|..|+..+|
T Consensus         2 ~f~CP~C~~~~~-~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKGFS-ESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCccC-HHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            478999999544 6778899775 444333489999987644  48889998877

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.87  E-value=2.2e-05  Score=52.53  Aligned_cols=49  Identities=20%  Similarity=0.438  Sum_probs=24.5

Q ss_pred             hhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCC
Q psy12015         26 SSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRS   81 (96)
Q Consensus        26 ~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f   81 (96)
                      ..+..|+  ..+.  +++.|. |+..+ ....|..|+..+.+.++ +.|..|+..+
T Consensus       466 s~LekH~--~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kp-i~C~fC~~~v  514 (567)
T PLN03086        466 GEMEKHM--KVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRL-ITCRFCGDMV  514 (567)
T ss_pred             HHHHHHH--HhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCc-eeCCCCCCcc
Confidence            3455555  3332  455555 55433 33455555555555555 5555555555

>PHA00733 hypothetical protein

Probab=97.87  E-value=7.4e-06  Score=45.08  Aligned_cols=56  Identities=18%  Similarity=0.134  Sum_probs=42.0

Q ss_pred             ccccCeeeccccccccccchhHHHH--h---hhhcCCCCceeCCCCCCCCCCchhHHHHHhh
Q psy12015         37 LTVHIDLKCDVCEKGYRYKTGLWRH--K---KFECGQEPKYQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        37 ~~~~~~~~c~~c~~~f~~~~~l~~h--~---~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      ....+++.|..|...|.....+..+  +   ....+.++ |.|+.||+.|.....|..|++.
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kP-y~C~~Cgk~Fss~s~L~~H~r~   95 (128)
T PHA00733         35 TPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSP-YVCPLCLMPFSSSVSLKQHIRY   95 (128)
T ss_pred             ChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCC-ccCCCCCCcCCCHHHHHHHHhc
Confidence            3446788999998877776655544  1   12334566 9999999999999999999985

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.82  E-value=3.3e-05  Score=51.72  Aligned_cols=70  Identities=13%  Similarity=0.213  Sum_probs=54.1

Q ss_pred             cccccccchhhhhhhccccccccCeeecccccccccc----------chhHHHHhhhhcCCCCceeCCCCCCCCCCchhH
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRY----------KTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHL   87 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~----------~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l   87 (96)
                      ++..+ .+..+..|+  .++.+++++.|..|+..+..          ...|..|+... |.++ +.|..||+.+..+ .+
T Consensus       483 Cg~~~-~R~~L~~H~--~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt-~~C~~Cgk~Vrlr-dm  556 (567)
T PLN03086        483 CGVVL-EKEQMVQHQ--ASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRT-APCDSCGRSVMLK-EM  556 (567)
T ss_pred             CCCCc-chhHHHhhh--hccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcc-eEccccCCeeeeh-hH
Confidence            44433 557889998  88999999999999998852          34788998875 7788 9999999988776 44


Q ss_pred             HHHHhh
Q psy12015         88 TTHMAI   93 (96)
Q Consensus        88 ~~h~r~   93 (96)
                      ..|.-.
T Consensus       557 ~~H~~~  562 (567)
T PLN03086        557 DIHQIA  562 (567)
T ss_pred             HHHHHH
Confidence            555544

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.74  E-value=2e-05  Score=31.55  Aligned_cols=26  Identities=31%  Similarity=0.727  Sum_probs=23.1

Q ss_pred             eeeccccccccccchhHHHHhhhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ||.|..|++.|....++..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999987643

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.73  E-value=2.4e-05  Score=30.04  Aligned_cols=23  Identities=35%  Similarity=0.713  Sum_probs=20.4

Q ss_pred             eeccccccccccchhHHHHhhhh
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~   65 (96)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67999999999999999998763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>smart00355 ZnF_C2H2 zinc finger

Probab=97.46  E-value=7.9e-05  Score=28.98  Aligned_cols=23  Identities=39%  Similarity=0.793  Sum_probs=18.2

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      |+|..|++.|.....+..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            46888888888888888888754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.44  E-value=0.00011  Score=33.74  Aligned_cols=31  Identities=19%  Similarity=0.313  Sum_probs=15.0

Q ss_pred             ccCeeeccccccccccchhHHHHhhhhcCCC
Q psy12015         39 VHIDLKCDVCEKGYRYKTGLWRHKKFECGQE   69 (96)
Q Consensus        39 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   69 (96)
                      .+.|..|+.|+..+....+|.+|+....+.+
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            3455666666666666666666665554443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.37  E-value=0.00014  Score=37.82  Aligned_cols=69  Identities=17%  Similarity=0.219  Sum_probs=21.1

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      ++..|.....+..|+. ..|....+     ....+.....+..+.+.... .. +.|..|++.|.....|..|++.+
T Consensus         5 C~~~f~~~~~l~~H~~-~~H~~~~~-----~~~~l~~~~~~~~~~~~~~~-~~-~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    5 CDESFSSVDDLLQHMK-KKHGFDIP-----DQKYLVDPNRLLNYLRKKVK-ES-FRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ---------------------------------------------------SS-EEBSSSS-EESSHHHHHHHHHHT
T ss_pred             cccccccccccccccc-cccccccc-----cccccccccccccccccccC-CC-CCCCccCCCCcCHHHHHHHHcCc
Confidence            4456777788888884 34443332     01111122233333332222 35 89999999999999999999864

>PRK04860 hypothetical protein; Provisional

Probab=97.31  E-value=0.00031  Score=40.10  Aligned_cols=39  Identities=23%  Similarity=0.625  Sum_probs=32.9

Q ss_pred             CeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCc
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHK   84 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~   84 (96)
                      -+|.|. |+.   ....+.+|.+++.+.++ |.|..|++.|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~-YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAV-YRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCcc-EECCCCCceeEEe
Confidence            379998 987   56678999999999888 9999999987654

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.17  E-value=0.00036  Score=26.58  Aligned_cols=23  Identities=30%  Similarity=0.767  Sum_probs=18.7

Q ss_pred             eeccccccccccchhHHHHhhhh
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~   65 (96)
                      |.|+.|+..|.....+..|++.+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            57999999999999999998865

...

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.15  E-value=0.00022  Score=27.83  Aligned_cols=22  Identities=18%  Similarity=0.471  Sum_probs=15.2

Q ss_pred             eeCCCCCCCCCCchhHHHHHhh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      |.|.+|+..|.....+..|.+.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4577777777777777777664

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.14  E-value=0.00052  Score=31.51  Aligned_cols=36  Identities=25%  Similarity=0.542  Sum_probs=23.4

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcCC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKHY   96 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h~   96 (96)
                      +.+.+.....|-.|++|+..+.+..+|.+|+.+.|+
T Consensus        14 ~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   14 KPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             --CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             HHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            333344434448999999999999999999998875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.11  E-value=0.00026  Score=44.30  Aligned_cols=55  Identities=31%  Similarity=0.547  Sum_probs=42.4

Q ss_pred             ccCeeeccc--cccccccchhHHHHhhh-h------------------cCCCCceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         39 VHIDLKCDV--CEKGYRYKTGLWRHKKF-E------------------CGQEPKYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        39 ~~~~~~c~~--c~~~f~~~~~l~~h~~~-~------------------~~~~~~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      +++||+|.+  |.+.+...-.|.-|+.- |                  ..++| |.|.+|+|.+....-|.-|+...
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KP-YrCevC~KRYKNlNGLKYHr~Hs  421 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKP-YRCEVCDKRYKNLNGLKYHRKHS  421 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCc-eeccccchhhccCccceeccccc
Confidence            469999975  99999998888877652 2                  11356 99999999999988887776543

>KOG3993|consensus

Probab=96.90  E-value=0.00017  Score=46.58  Aligned_cols=52  Identities=25%  Similarity=0.498  Sum_probs=44.5

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      .|.|..|-..|...-.|..|.-....... |.|+.|+|.|+=..+|..|+|=|
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vE-YrCPEC~KVFsCPANLASHRRWH  318 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVE-YRCPECDKVFSCPANLASHRRWH  318 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEee-ecCCcccccccCchhhhhhhccc
Confidence            47899999999988889888765555556 99999999999999999999865

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.81  E-value=0.00065  Score=26.25  Aligned_cols=23  Identities=39%  Similarity=0.977  Sum_probs=14.8

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|+.|+.... ...|.+|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777776666 667777777765

>smart00355 ZnF_C2H2 zinc finger

Probab=96.73  E-value=0.0012  Score=25.44  Aligned_cols=24  Identities=25%  Similarity=0.549  Sum_probs=20.3

Q ss_pred             eeccccccccccchhHHHHhhhhc
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      +.|..|++.|.....+..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            468999999999999999988553

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.68  E-value=0.00057  Score=27.27  Aligned_cols=22  Identities=23%  Similarity=0.522  Sum_probs=15.2

Q ss_pred             eeCCCCCCCCCCchhHHHHHhh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      |.|..|++.|.+...+..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777766654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.40  E-value=0.0026  Score=24.65  Aligned_cols=23  Identities=26%  Similarity=0.713  Sum_probs=20.1

Q ss_pred             eeccccccccccchhHHHHhhhh
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~   65 (96)
                      |.|..|...|.....+..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57999999999999999998753

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.08  E-value=0.0049  Score=24.17  Aligned_cols=20  Identities=25%  Similarity=0.576  Sum_probs=12.3

Q ss_pred             eeCCCCCCCCCCchhHHHHHh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r   92 (96)
                      ..|+.||+.| ....+.+|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3566777776 4555666654

>PHA00732 hypothetical protein

Probab=95.90  E-value=0.01  Score=30.02  Aligned_cols=45  Identities=24%  Similarity=0.345  Sum_probs=33.9

Q ss_pred             ccccccccccchhhhhhhccc-cccccCeeeccccccccccchhHHHHhhhhcC
Q psy12015         15 NTKLDFGVIRNSSVDKSLNTN-VLTVHIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        15 ~~~~~~~~~~~~~~~~h~~~~-~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ...+++.|.....+..|+  + .|.+   +.|..|++.|.   .+..|..+...
T Consensus         4 C~~Cgk~F~s~s~Lk~H~--r~~H~~---~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          4 CPICGFTTVTLFALKQHA--RRNHTL---TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CCCCCCccCCHHHHHHHh--hcccCC---CccCCCCCEeC---ChhhhhcccCC
Confidence            345788899999999999  5 3553   57999999997   46777765443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.16  E-value=0.021  Score=23.81  Aligned_cols=22  Identities=14%  Similarity=0.378  Sum_probs=16.2

Q ss_pred             eeCCCCCCCCCCchhHHHHHhh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      |.|..|+..|.....+..|...
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             eEccccCCccCCHHHHHHHHCh
Confidence            7788888888777777777654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.55  E-value=0.064  Score=22.36  Aligned_cols=24  Identities=33%  Similarity=0.800  Sum_probs=16.6

Q ss_pred             eeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      |.|..||..+....            .+ +.|+.||.
T Consensus         2 ~~C~~CGy~y~~~~------------~~-~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------AP-WVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CC-CcCcCCCC
Confidence            67888887654322            44 88999975

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=92.86  E-value=0.043  Score=34.79  Aligned_cols=23  Identities=35%  Similarity=0.809  Sum_probs=19.3

Q ss_pred             cCeeeccccccccccchhHHHHh
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHK   62 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~   62 (96)
                      ++||+|.+|++.+...-.|.-|.
T Consensus       396 ~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         396 DKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CCceeccccchhhccCccceecc
Confidence            58999999999999887776653

>PRK04860 hypothetical protein; Provisional

Probab=92.84  E-value=0.051  Score=31.18  Aligned_cols=31  Identities=16%  Similarity=0.323  Sum_probs=26.0

Q ss_pred             cchhhhhhhccccccccCeeeccccccccccch
Q psy12015         24 RNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKT   56 (96)
Q Consensus        24 ~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~   56 (96)
                      ....+..|.  ++++++++|.|..|+..|....
T Consensus       127 ~~~~~rrH~--ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        127 HQLTVRRHN--RVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             eeCHHHHHH--HHhcCCccEECCCCCceeEEec
Confidence            566678888  8999999999999999887543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.77  E-value=0.043  Score=35.20  Aligned_cols=52  Identities=23%  Similarity=0.562  Sum_probs=32.1

Q ss_pred             eeeccccccccccchhHHHHhh--hhcCC--CCceeCC--CCCCCCCCchhHHHHHhhc
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKK--FECGQ--EPKYQCP--HCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~--~~~~~--~~~~~C~--~c~~~f~~~~~l~~h~r~~   94 (96)
                      ++.|..|...|.....+..|.+  .|.+.  ++ +.|.  .|++.|.....+..|...|
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~  346 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP-FSCPYSLCGKLFSRNDALKRHILLH  346 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCc-eeeeccCCCccccccccccCCcccc
Confidence            4556666666666666666666  56665  55 6666  5666666666665555443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=92.50  E-value=0.12  Score=24.03  Aligned_cols=23  Identities=26%  Similarity=0.616  Sum_probs=18.6

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|+.|++. .+...|..|....|
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H   25 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEH   25 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHC
Confidence            899999995 55678999987765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG1146|consensus

Probab=92.39  E-value=0.087  Score=39.12  Aligned_cols=70  Identities=20%  Similarity=0.389  Sum_probs=51.0

Q ss_pred             cccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhc-------------------------CCCCceeCCC
Q psy12015         22 VIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFEC-------------------------GQEPKYQCPH   76 (96)
Q Consensus        22 ~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~-------------------------~~~~~~~C~~   76 (96)
                      +.+...+..++. ..+...+.+.|..|+..|.....|..|+|..+                         +.++ |.|..
T Consensus       446 ~~s~r~~~~~t~-~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p-~~C~~  523 (1406)
T KOG1146|consen  446 LESKRSLEGQTV-VLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP-YPCRA  523 (1406)
T ss_pred             hhhhccccccee-eeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc-cccee
Confidence            334444444442 45566688999999999999999999988611                         1234 88999


Q ss_pred             CCCCCCCchhHHHHHhh
Q psy12015         77 CPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        77 c~~~f~~~~~l~~h~r~   93 (96)
                      |...+....+|.+|+..
T Consensus       524 C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  524 CNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             eeeeeecchHHHHHHHH
Confidence            99999999999888764

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=90.73  E-value=0.2  Score=21.34  Aligned_cols=34  Identities=21%  Similarity=0.520  Sum_probs=22.5

Q ss_pred             eeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCC
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSK   82 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~   82 (96)
                      ..|+.|+..|....+...    ..+ .. ..|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~~----~~~-~~-v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQLG----ANG-GK-VRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHcC----CCC-CE-EECCCCCCEEE
Confidence            679999988876654321    112 34 78999998764

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=90.52  E-value=0.36  Score=23.00  Aligned_cols=32  Identities=28%  Similarity=0.682  Sum_probs=19.4

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      .|.|..||+......     .+-.....+ |.|+.||.
T Consensus        27 ~F~CPnCGe~~I~Rc-----~~CRk~g~~-Y~Cp~CGF   58 (61)
T COG2888          27 KFPCPNCGEVEIYRC-----AKCRKLGNP-YRCPKCGF   58 (61)
T ss_pred             EeeCCCCCceeeehh-----hhHHHcCCc-eECCCcCc
Confidence            578999986543322     222222356 99999984

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=90.42  E-value=0.21  Score=28.91  Aligned_cols=24  Identities=33%  Similarity=0.632  Sum_probs=17.8

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      -|.|.+||..             +.| .+|.+|++||-
T Consensus       134 ~~vC~vCGy~-------------~~g-e~P~~CPiCga  157 (166)
T COG1592         134 VWVCPVCGYT-------------HEG-EAPEVCPICGA  157 (166)
T ss_pred             EEEcCCCCCc-------------ccC-CCCCcCCCCCC
Confidence            6999999864             345 34489999984

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=90.29  E-value=0.15  Score=30.61  Aligned_cols=45  Identities=24%  Similarity=0.518  Sum_probs=28.0

Q ss_pred             cCeeeccccccccccchhHHHHhhh----------hcCCCCc----eeCCCCCCCCCCc
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKF----------ECGQEPK----YQCPHCPHRSKHK   84 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~----------~~~~~~~----~~C~~c~~~f~~~   84 (96)
                      ++...|++|+..|....-.....+.          ..+..|.    ..|+.||.++...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            3567899999999886554444432          1111221    4799999876544

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=90.22  E-value=0.28  Score=20.61  Aligned_cols=25  Identities=28%  Similarity=0.494  Sum_probs=16.2

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      .|.|..||..+..             ..+|..|++||.
T Consensus         2 ~~~C~~CG~i~~g-------------~~~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHEG-------------EEAPEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeEC-------------CcCCCcCcCCCC
Confidence            4778888865432             123368888875

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=90.20  E-value=0.29  Score=20.84  Aligned_cols=33  Identities=18%  Similarity=0.451  Sum_probs=22.6

Q ss_pred             eeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCC
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRS   81 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f   81 (96)
                      ..|+.|...|.......     ...... .+|+.|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~i-----p~~g~~-v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEKI-----PPKGRK-VRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHHC-----CCCCcE-EECCCCCCEe
Confidence            57889998887765432     122245 8899998876

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.04  E-value=0.12  Score=24.32  Aligned_cols=33  Identities=21%  Similarity=0.279  Sum_probs=23.4

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      .+-.||.-+.|+-|+..|....+..+|..-..+
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            444567777888888888888777777764444

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=89.98  E-value=0.52  Score=20.11  Aligned_cols=34  Identities=24%  Similarity=0.698  Sum_probs=23.0

Q ss_pred             eeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCC
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSK   82 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~   82 (96)
                      ..|+.|+..|....+-     +..+... ..|+.|+..|.
T Consensus         3 i~CP~C~~~f~v~~~~-----l~~~~~~-vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDK-----LPAGGRK-VRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHHH-----cccCCcE-EECCCCCcEee
Confidence            4688999888766542     2233345 89999988764

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=88.48  E-value=0.41  Score=21.39  Aligned_cols=30  Identities=23%  Similarity=0.494  Sum_probs=20.5

Q ss_pred             CeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCC
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRS   81 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f   81 (96)
                      ..|.|..|+..+......          .. +.|+.||..+
T Consensus         2 ~~y~C~~CG~~~~~~~~~----------~~-~~Cp~CG~~~   31 (46)
T PRK00398          2 AEYKCARCGREVELDEYG----------TG-VRCPYCGYRI   31 (46)
T ss_pred             CEEECCCCCCEEEECCCC----------Cc-eECCCCCCeE
Confidence            368899999877653221          14 7899998754

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=88.40  E-value=0.42  Score=24.43  Aligned_cols=25  Identities=24%  Similarity=0.620  Sum_probs=21.6

Q ss_pred             eeeccccccccccchhHHHHhhhhc
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      .+.|..|+..|.....+..|++.+.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCcc
Confidence            6899999999999999999999643

>KOG2186|consensus

Probab=87.95  E-value=0.53  Score=29.06  Aligned_cols=38  Identities=18%  Similarity=0.467  Sum_probs=17.5

Q ss_pred             eeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCC
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKH   83 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~   83 (96)
                      |.|..||.... ...+..|+....+ .. |.|--|++.|..
T Consensus         4 FtCnvCgEsvK-Kp~vekH~srCrn-~~-fSCIDC~k~F~~   41 (276)
T KOG2186|consen    4 FTCNVCGESVK-KPQVEKHMSRCRN-AY-FSCIDCGKTFER   41 (276)
T ss_pred             Eehhhhhhhcc-ccchHHHHHhccC-Ce-eEEeeccccccc
Confidence            44555554433 2233444444333 33 555555555544

>smart00531 TFIIE Transcription initiation factor IIE

Probab=87.41  E-value=0.95  Score=25.55  Aligned_cols=39  Identities=18%  Similarity=0.468  Sum_probs=26.5

Q ss_pred             ccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCC
Q psy12015         39 VHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSK   82 (96)
Q Consensus        39 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~   82 (96)
                      ...-|.|+.|+..|.....+...   . .... |.|+.||....
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~~---d-~~~~-f~Cp~Cg~~l~  134 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQLL---D-MDGT-FTCPRCGEELE  134 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHhc---C-CCCc-EECCCCCCEEE
Confidence            45579999999998865443221   1 1345 99999998653

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=87.18  E-value=0.42  Score=30.68  Aligned_cols=59  Identities=17%  Similarity=0.290  Sum_probs=48.9

Q ss_pred             cccccccccccchhhhhhhccc--ccccc--Ceeecc--ccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         14 TNTKLDFGVIRNSSVDKSLNTN--VLTVH--IDLKCD--VCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        14 ~~~~~~~~~~~~~~~~~h~~~~--~~~~~--~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      ....+...|.....+..|.  +  .|.++  +|+.|.  .|++.|.....+..|...+.+..+ +.+.
T Consensus       291 ~~~~~~~~~s~~~~l~~~~--~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  355 (467)
T COG5048         291 KSKQCNISFSRSSPLTRHL--RSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP-AKEK  355 (467)
T ss_pred             CCccccCCccccccccccc--cccccccccCCceeeeccCCCccccccccccCCcccccCCCc-cccc
Confidence            3445667788888899998  7  79999  999999  799999999999999998888765 5553

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=86.96  E-value=0.31  Score=25.04  Aligned_cols=32  Identities=19%  Similarity=0.558  Sum_probs=22.6

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSK   82 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~   82 (96)
                      ...|.|+.|++.        ...+.-.|  . |.|..||..|.
T Consensus        33 ~~~~~Cp~C~~~--------~VkR~a~G--I-W~C~kCg~~fA   64 (89)
T COG1997          33 RAKHVCPFCGRT--------TVKRIATG--I-WKCRKCGAKFA   64 (89)
T ss_pred             hcCCcCCCCCCc--------ceeeeccC--e-EEcCCCCCeec
Confidence            347899999874        23344444  5 99999998774

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=86.28  E-value=0.36  Score=22.05  Aligned_cols=30  Identities=17%  Similarity=0.542  Sum_probs=19.3

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      .|.|..|+..|.......      . ... -.|+.||.
T Consensus         5 ey~C~~Cg~~fe~~~~~~------~-~~~-~~CP~Cg~   34 (52)
T TIGR02605         5 EYRCTACGHRFEVLQKMS------D-DPL-ATCPECGG   34 (52)
T ss_pred             EEEeCCCCCEeEEEEecC------C-CCC-CCCCCCCC
Confidence            378999998887543221      1 233 57999986

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=86.28  E-value=0.42  Score=20.53  Aligned_cols=31  Identities=16%  Similarity=0.508  Sum_probs=20.5

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHR   80 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~   80 (96)
                      .|.|..|+..|.......      .+ .. -.|+.||..
T Consensus         5 ~y~C~~Cg~~fe~~~~~~------~~-~~-~~CP~Cg~~   35 (41)
T smart00834        5 EYRCEDCGHTFEVLQKIS------DD-PL-ATCPECGGD   35 (41)
T ss_pred             EEEcCCCCCEEEEEEecC------CC-CC-CCCCCCCCc
Confidence            478999999886544321      12 34 579999873

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=86.13  E-value=1.2  Score=19.82  Aligned_cols=27  Identities=22%  Similarity=0.550  Sum_probs=18.8

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHR   80 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~   80 (96)
                      .|.|..|+..+...           ...+ ..|+.||..
T Consensus         2 ~Y~C~~Cg~~~~~~-----------~~~~-irC~~CG~r   28 (44)
T smart00659        2 IYICGECGRENEIK-----------SKDV-VRCRECGYR   28 (44)
T ss_pred             EEECCCCCCEeecC-----------CCCc-eECCCCCce
Confidence            47899999876543           1234 789999864

present in RNA polymerase I, II and III

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=85.99  E-value=0.35  Score=21.27  Aligned_cols=30  Identities=20%  Similarity=0.739  Sum_probs=20.5

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      .|.|..|+..|.....+.      . ..+ -.|+.||.
T Consensus         5 ey~C~~Cg~~fe~~~~~~------~-~~~-~~CP~Cg~   34 (42)
T PF09723_consen    5 EYRCEECGHEFEVLQSIS------E-DDP-VPCPECGS   34 (42)
T ss_pred             EEEeCCCCCEEEEEEEcC------C-CCC-CcCCCCCC
Confidence            378999998887654322      1 234 68999987

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=85.80  E-value=0.69  Score=26.49  Aligned_cols=36  Identities=14%  Similarity=0.333  Sum_probs=27.1

Q ss_pred             cccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCC
Q psy12015         38 TVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKH   83 (96)
Q Consensus        38 ~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~   83 (96)
                      ....-|.|+.|+..|+....+.         .. |.|+.||.....
T Consensus       105 ~~~~~Y~Cp~c~~r~tf~eA~~---------~~-F~Cp~Cg~~L~~  140 (158)
T TIGR00373       105 TNNMFFICPNMCVRFTFNEAME---------LN-FTCPRCGAMLDY  140 (158)
T ss_pred             cCCCeEECCCCCcEeeHHHHHH---------cC-CcCCCCCCEeee
Confidence            3456789999999988776653         24 999999986543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG2893|consensus

Probab=85.73  E-value=0.28  Score=30.09  Aligned_cols=42  Identities=19%  Similarity=0.393  Sum_probs=30.6

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhH
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHL   87 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l   87 (96)
                      .+| .|=.|.+.|..+..|..|++.    +. |+|-+|-+.+.+-.-|
T Consensus         9 ~kp-wcwycnrefddekiliqhqka----kh-fkchichkkl~sgpgl   50 (341)
T KOG2893|consen    9 DKP-WCWYCNREFDDEKILIQHQKA----KH-FKCHICHKKLFSGPGL   50 (341)
T ss_pred             CCc-eeeecccccchhhhhhhhhhh----cc-ceeeeehhhhccCCCc
Confidence            344 477888999999999888774    66 9999997765444333

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=85.15  E-value=1.2  Score=21.26  Aligned_cols=32  Identities=28%  Similarity=0.716  Sum_probs=18.2

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      .|.|..||........     +-.....+ |.|+.||.
T Consensus        25 ~F~CPnCG~~~I~RC~-----~CRk~~~~-Y~CP~CGF   56 (59)
T PRK14890         25 KFLCPNCGEVIIYRCE-----KCRKQSNP-YTCPKCGF   56 (59)
T ss_pred             EeeCCCCCCeeEeech-----hHHhcCCc-eECCCCCC
Confidence            5788888875322221     11112256 89988874

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=85.05  E-value=0.92  Score=26.55  Aligned_cols=36  Identities=14%  Similarity=0.474  Sum_probs=26.7

Q ss_pred             ccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCc
Q psy12015         39 VHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHK   84 (96)
Q Consensus        39 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~   84 (96)
                      ...-|.|+.|+..|+....+.         .. |.|+.||.....-
T Consensus       114 ~~~~Y~Cp~C~~rytf~eA~~---------~~-F~Cp~Cg~~L~~~  149 (178)
T PRK06266        114 NNMFFFCPNCHIRFTFDEAME---------YG-FRCPQCGEMLEEY  149 (178)
T ss_pred             CCCEEECCCCCcEEeHHHHhh---------cC-CcCCCCCCCCeec
Confidence            345789999999988776542         24 9999999875443

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=84.82  E-value=0.55  Score=28.32  Aligned_cols=26  Identities=27%  Similarity=0.588  Sum_probs=19.1

Q ss_pred             CCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .. |.|..|+|.|.-..-+..|+...|
T Consensus        76 ~K-~~C~lc~KlFkg~eFV~KHI~nKH  101 (214)
T PF04959_consen   76 DK-WRCPLCGKLFKGPEFVRKHIFNKH  101 (214)
T ss_dssp             EE-EEE-SSS-EESSHHHHHHHHHHH-
T ss_pred             CE-ECCCCCCcccCChHHHHHHHhhcC
Confidence            44 899999999999888888887655

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.48  E-value=1.2  Score=19.57  Aligned_cols=22  Identities=23%  Similarity=0.430  Sum_probs=11.2

Q ss_pred             eeCCCCCCCCCCc----hhHHHHHhh
Q psy12015         72 YQCPHCPHRSKHK----AHLTTHMAI   93 (96)
Q Consensus        72 ~~C~~c~~~f~~~----~~l~~h~r~   93 (96)
                      ..|..|++.+...    +.|.+|++.
T Consensus        17 a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   17 AKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             EEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            5677776655442    556666643

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=84.04  E-value=1.1  Score=17.60  Aligned_cols=19  Identities=26%  Similarity=0.679  Sum_probs=12.8

Q ss_pred             eCCCCCCCCCCchhHHHHHh
Q psy12015         73 QCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        73 ~C~~c~~~f~~~~~l~~h~r   92 (96)
                      .|++|++.+ ....+++|..
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            578888777 4456667654

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PHA00626 hypothetical protein

Probab=83.04  E-value=0.77  Score=21.62  Aligned_cols=12  Identities=25%  Similarity=0.401  Sum_probs=5.9

Q ss_pred             eeeccccccccc
Q psy12015         42 DLKCDVCEKGYR   53 (96)
Q Consensus        42 ~~~c~~c~~~f~   53 (96)
                      .|.|..|+..|+
T Consensus        23 rYkCkdCGY~ft   34 (59)
T PHA00626         23 DYVCCDCGYNDS   34 (59)
T ss_pred             ceEcCCCCCeec
Confidence            455555554443

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=82.68  E-value=1.1  Score=23.92  Aligned_cols=25  Identities=32%  Similarity=0.725  Sum_probs=22.8

Q ss_pred             eeC----CCCCCCCCCchhHHHHHhhcCC
Q psy12015         72 YQC----PHCPHRSKHKAHLTTHMAIKHY   96 (96)
Q Consensus        72 ~~C----~~c~~~f~~~~~l~~h~r~~h~   96 (96)
                      |.|    ..|+....+...+.+|.+.+|.
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            889    8999999999999999998873

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=81.61  E-value=0.55  Score=26.86  Aligned_cols=13  Identities=23%  Similarity=0.493  Sum_probs=6.5

Q ss_pred             eeccccccccccc
Q psy12015         43 LKCDVCEKGYRYK   55 (96)
Q Consensus        43 ~~c~~c~~~f~~~   55 (96)
                      +.|+.|+..|...
T Consensus        29 ~~c~~c~~~f~~~   41 (154)
T PRK00464         29 RECLACGKRFTTF   41 (154)
T ss_pred             eeccccCCcceEe
Confidence            4455555555443

>smart00614 ZnF_BED BED zinc finger

Probab=81.07  E-value=1.5  Score=19.87  Aligned_cols=21  Identities=19%  Similarity=0.540  Sum_probs=13.4

Q ss_pred             eeCCCCCCCCCCc-----hhHHHHHh
Q psy12015         72 YQCPHCPHRSKHK-----AHLTTHMA   92 (96)
Q Consensus        72 ~~C~~c~~~f~~~-----~~l~~h~r   92 (96)
                      -.|..|++.+...     ++|.+|++
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            4577777666444     46777776

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF14353 CpXC: CpXC protein

Probab=80.37  E-value=0.94  Score=24.81  Aligned_cols=13  Identities=31%  Similarity=1.071  Sum_probs=8.8

Q ss_pred             eeCCCCCCCCCCc
Q psy12015         72 YQCPHCPHRSKHK   84 (96)
Q Consensus        72 ~~C~~c~~~f~~~   84 (96)
                      |.|+.||..|.-.
T Consensus        39 ~~CP~Cg~~~~~~   51 (128)
T PF14353_consen   39 FTCPSCGHKFRLE   51 (128)
T ss_pred             EECCCCCCceecC
Confidence            7777777766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	96
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-05

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.9 bits (91), Expect = 1e-05
 Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%)

Query: 43 LKCDVCEKGYRYKTGLWRHKK---FECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH 95
          L+C++C    R K  L  H++           + C  C  R +    +  H +  H
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHRSKSH 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 37.9 bits (89), Expect = 2e-05
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 44 KCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAI 93
          KC  C      K  L  H++  C   P ++C +C   +K  ++L+ HM  
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKHMKK 59

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.5 bits (88), Expect = 3e-05
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 44 KCDVCEKGYRYKTGLWRHKKFECGQEPK-YQCPHCPHRSKHKAHLTTHMAIKH 95
          +C +C   +     +  H   +  +    + CPHC      K+ L  H+  +H
Sbjct: 17 ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.5 bits (88), Expect = 3e-05
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 44 KCDVCEKGYRYKTGLWRHKKFECGQEPK-YQCPHCPHRSKHKAHLTTHMAIKH 95
          +C VC + Y + +   RH      +  K Y CP C      K ++T H+ I H
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	96
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.82
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.76
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.75
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.72
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.71
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.7
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.7
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.69
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.69
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.69
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.69
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.68
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.68
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.67
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.67
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.66
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.65
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.65
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.65
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.64
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.64
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.64
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.63
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.63
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.63
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.63
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.62
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.61
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.61
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.6
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.6
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.6
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.59
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.58
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.57
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.57
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.54
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.54
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.52
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.51
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.51
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.5
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.5
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.49
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.49
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.48
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.48
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.47
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.45
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.44
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.42
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.41
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.41
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.4
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.4
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.4
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.4
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.39
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.39
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.39
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.38
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.38
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.38
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.37
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.36
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.35
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.34
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.33
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.33
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.32
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.32
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.31
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.31
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.3
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.28
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.27
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.27
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.26
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.26
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.25
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.25
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.25
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.24
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.22
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.21
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.2
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.2
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.19
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.19
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.17
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.16
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.13
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.11
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.1
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.08
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.02
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.01
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.99
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.99
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.98
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.94
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.92
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.9
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.89
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.89
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.86
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.86
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.84
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.84
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.83
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.83
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.82
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.82
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.8
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.79
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.79
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.79
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.78
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.78
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.77
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.77
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.77
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.76
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.76
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.75
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.75
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.74
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.73
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.72
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.72
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.69
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.68
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.68
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.66
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.64
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.61
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.61
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.59
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.58
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.58
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.57
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.56
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.56
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.56
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.53
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.53
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.52
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.49
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.49
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.47
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.45
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.45
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.43
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.42
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.41
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.41
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.41
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.4
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.38
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.38
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.74
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.38
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.38
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.37
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.37
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.36
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.35
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.35
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.34
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.34
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.34
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.33
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.33
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.32
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.31
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.3
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.63
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.29
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.58
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.24
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.24
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.24
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.24
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.55
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.55
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.22
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.21
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.18
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.13
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.39
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.1
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.1
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.07
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.88
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.84
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.45
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.24
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.15
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.03
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.99
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.93
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.41
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.58
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.8
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	90.75
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	90.57
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	89.36
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	89.12
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.64
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	86.48
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	86.32
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	85.26
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.21
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	83.53
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	82.84
2kn9_A	81	Rubredoxin; metalloprotein, ssgcid, structural gen	81.37
4rxn_A	54	Rubredoxin; electron transfer(iron-sulfur protein)	80.07

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.82  E-value=5.8e-21  Score=104.69  Aligned_cols=85  Identities=16%  Similarity=0.277  Sum_probs=76.9

Q ss_pred             EEeecCcccc--cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCch
Q psy12015          8 MFVRKGTNTK--LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKA   85 (96)
Q Consensus         8 ~~~~~~~~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~   85 (96)
                      ++.|+....+  +++.|.....|..|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+.||+.|....
T Consensus        16 ~h~Gek~y~C~~C~k~F~~~~~L~~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           16 IVDGRVYYICIVCKRSYVCLTSLRRHF--NIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR-YQCLACGKSFINYQ   92 (133)
T ss_dssp             EETTEEEEEETTTCCEESCHHHHHHHH--HHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCC-EEESSSCCEESSHH
T ss_pred             ecCCCcCeECCCCCCCcCCHHHHHHHH--HHcCCCCCeeCCccCeecccccchhhhccccCCCcc-ccCCCCCCCcCCHH
Confidence            3444444434  889999999999999  899999999999999999999999999999999888 99999999999999


Q ss_pred             hHHHHHhhcC
Q psy12015         86 HLTTHMAIKH   95 (96)
Q Consensus        86 ~l~~h~r~~h   95 (96)
                      .|..|++++|
T Consensus        93 ~L~~H~~~hh  102 (133)
T 2lt7_A           93 FMSSHIKSVH  102 (133)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHhHHhc
Confidence            9999999886

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.81  E-value=3.3e-20  Score=88.85  Aligned_cols=55  Identities=27%  Similarity=0.674  Sum_probs=53.4

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+||.|..|++.|.....|..|+++|+|+++ |.|..||+.|...+.|.+|+++|.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~C~k~F~~~~~L~~H~~~Ht   56 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRP-RSCPECGKCFRDQSEVNRHLKVHQ   56 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCC-EECTTTCCEESSHHHHHHHGGGGS
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcC-eECCCCCCCcCCHHHHHHHhCccC
Confidence            7999999999999999999999999999998 999999999999999999999986

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.76  E-value=8.6e-19  Score=88.19  Aligned_cols=77  Identities=19%  Similarity=0.362  Sum_probs=72.4

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..+++.|.....|..|+  +.|.++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|+
T Consensus         5 ~~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A            5 KICGKSFKRSSTLSTHL--LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP-HKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             SSSCCEESSHHHHHHHH--HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCC-EECTTTSCEESSHHHHHHHHHHHC
T ss_pred             CCCcccccCchhHHHHH--HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCC-CcCCCcchhhCChHHHHHHHHhhC
Confidence            34678899999999999  889999999999999999999999999999999888 999999999999999999999986

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.75  E-value=1.2e-18  Score=89.17  Aligned_cols=76  Identities=17%  Similarity=0.406  Sum_probs=72.2

Q ss_pred             ccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .+++.|.....|..|+  ++|.++++|.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus        11 ~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~H~   86 (90)
T 1a1h_A           11 SCDRRFSQSGSLTRHI--RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDERKRHTKIHL   86 (90)
T ss_dssp             SCCCEESSHHHHHHHH--HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EECTTTCCEESSHHHHHHHHGGGG
T ss_pred             CCCCccCCHHHHHHHH--HHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCC-ccCCCCCchhCCHHHHHHHHHHhc
Confidence            4788999999999999  899999999999999999999999999999999888 999999999999999999999986

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=3.6e-18  Score=88.30  Aligned_cols=77  Identities=19%  Similarity=0.402  Sum_probs=72.5

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..+++.|.....|..|+  +.|.++++|.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus        12 ~~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~   88 (96)
T 2dmd_A           12 EVCGKCFSRKDKLKTHM--RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP-FKCQICPYASRNSSQLTVHLRSHT   88 (96)
T ss_dssp             TTTTBCCCCHHHHHHHG--GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCC-EECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCCCCccCCHHHHHHHH--HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCCCCCccCCHHHHHHHHHHhc
Confidence            34788899999999999  899999999999999999999999999999999888 999999999999999999999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.72  E-value=7.6e-18  Score=88.54  Aligned_cols=76  Identities=17%  Similarity=0.343  Sum_probs=72.0

Q ss_pred             ccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .+++.|.....|..|+  +.|.++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|+
T Consensus        22 ~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~~~H~   97 (106)
T 2ee8_A           22 FCGRHFTKSYNLLIHE--RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP-FKCQECGKGFCQSRTLAVHKTLHM   97 (106)
T ss_dssp             SSCCBCSSHHHHHHHH--HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT-TSCSSSCCCCSSHHHHHHHHHHTT
T ss_pred             CCCCccCCHHHHHHHH--HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCC-eECCCcCCcccCHHHHHHHHHHhC
Confidence            3788899999999999  899999999999999999999999999999999888 999999999999999999999886

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=7.1e-18  Score=89.22  Aligned_cols=76  Identities=22%  Similarity=0.417  Sum_probs=71.6

Q ss_pred             ccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .+++.|.....|..|+  +.|.++++|.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++||
T Consensus        14 ~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~~~   89 (110)
T 2csh_A           14 QCGKSFTHKSQRDRHM--SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP-YECNICAKRFMWRDSFHRHVTSCT   89 (110)
T ss_dssp             TTSCEESSHHHHHHHH--HHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC-EECSSSCCEESCHHHHHHHHHHHH
T ss_pred             cCCCccCCHHHHHHHH--HHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC-eeCCCCcchhcCHHHHHHHHHHcc
Confidence            3788899999999999  889999999999999999999999999999999888 999999999999999999999875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.71  E-value=1.5e-17  Score=84.84  Aligned_cols=74  Identities=24%  Similarity=0.408  Sum_probs=70.2

Q ss_pred             cccccccchhhhhhhccccccccCeeecc--ccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCD--VCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      +++.|.....|..|+  ..|.++++|.|.  .|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++|
T Consensus        13 C~~~f~~~~~l~~H~--~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           13 CGKTYTKSSHLKAHL--RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP-FQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             TCCEESSHHHHHHHH--TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC-EECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCCcCCCHHHHHHHH--HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC-ccCCCCCcccCCHHHHHHHHHhh
Confidence            778899999999999  899999999997  699999999999999999999888 99999999999999999999987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.1e-17  Score=83.42  Aligned_cols=66  Identities=20%  Similarity=0.369  Sum_probs=59.6

Q ss_pred             hhhhhhccccccccCeeeccccccccccchhHHHHhh-hhcCC-CCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         27 SVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKK-FECGQ-EPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        27 ~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~-~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++..|+  ++|++++||.|..|++.|.....|..|++ .|.++ ++ |.|..|++.|.....|..|++++|
T Consensus         2 s~~~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~-~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            2 SSGSSG--RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK-FHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCCCC--CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSS-EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CCCccc--cccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCc-cCCCCCCCccCCHHHHHHHHHHhC
Confidence            356688  89999999999999999999999999997 57665 56 999999999999999999999877

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=2e-17  Score=80.21  Aligned_cols=60  Identities=25%  Similarity=0.470  Sum_probs=56.1

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhh-h-cCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKF-E-CGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~-~-~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++|++++||.|..|++.|....+|..|++. | .+.++ |.|+.|++.|.....|..|++++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~-~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-YPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC-EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcC-eECCCCCCccCCHHHHHHHHHHHc
Confidence            689999999999999999999999999998 6 47677 999999999999999999999987

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.1e-17  Score=84.59  Aligned_cols=75  Identities=17%  Similarity=0.261  Sum_probs=69.4

Q ss_pred             ccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCC--CCceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ--EPKYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~--~~~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      .+++.|.....|..|+  ++|.++++|.|..|++.|.....|..|++.|.+.  ++ |.|..|++.|.....|..|++..
T Consensus        12 ~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-~~C~~C~~~f~~~~~L~~H~~~~   88 (95)
T 2yt9_A           12 ICGKIFRDVYHLNRHK--LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-YICQSCGKGFSRPDHLNGHIKQV   88 (95)
T ss_dssp             SSCCEESSSHHHHHHH--HHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSS-BCCSSSCCCBSSHHHHHHHHHHT
T ss_pred             CCCCccCChHHHHHHH--HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCc-eECCCccchhCCHHHHHHHHHHh
Confidence            4788899999999999  8899999999999999999999999999999886  66 99999999999999999999743

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.4e-17  Score=81.32  Aligned_cols=60  Identities=22%  Similarity=0.491  Sum_probs=57.4

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++|++++||.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP-YKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC-EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC-eECCCCCcccCCHHHHHHHHHhcC
Confidence            789999999999999999999999999999999888 999999999999999999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=3.6e-18  Score=89.01  Aligned_cols=72  Identities=22%  Similarity=0.330  Sum_probs=65.4

Q ss_pred             ccccchhhhhhhccccccccCeeeccccccccc-cchhHHHHhhhhcC-CCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         21 GVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYR-YKTGLWRHKKFECG-QEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        21 ~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~-~~~~l~~h~~~~~~-~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +++....+..|+  ++|.++++|.|..|++.|. ....|..|++.|.+ .++ |.|..|++.|.....|.+|+++||
T Consensus         5 s~~~~~~~~~h~--~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~-~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            5 SSGPGGPEEQWQ--RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA-LKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCCSCSHHH--HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH-HSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCCcHHHHH--HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC-EECCCCCCccCCHHHHHHHHHHHc
Confidence            345556678888  8999999999999999999 99999999999988 777 999999999999999999999887

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.69  E-value=2.9e-17  Score=85.40  Aligned_cols=75  Identities=24%  Similarity=0.385  Sum_probs=70.8

Q ss_pred             cccccccchhhhhhhccccccccCeeecc--ccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCD--VCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +++.|.....|..|+  +.|.++++|.|.  .|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus        23 C~~~f~~~~~l~~H~--~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           23 CTKVYTKSSHLKAHL--RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP-FQCGVCNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             CCCEESCHHHHHHHH--HHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS-CBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred             CCCcccCHHHHHHHH--HHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC-eECCCCcCccCCHHHHHHHHHHhC
Confidence            678899999999999  889999999996  699999999999999999999888 999999999999999999999986

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.69  E-value=2.1e-17  Score=88.27  Aligned_cols=74  Identities=18%  Similarity=0.448  Sum_probs=50.9

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeC--CCCCCCCCCchhHHHHHhhc
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQC--PHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C--~~c~~~f~~~~~l~~h~r~~   94 (96)
                      +++.|.....|..|+  +.|.++++|.|..|++.|.....|..|++.|.++++ |.|  +.|++.|.....|..|+++|
T Consensus        44 C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           44 CERRFSRSDQLKRHQ--RRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP-FSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CCCEESSHHHHHHHH--HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCC-EECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CcCccCCHHHHHHHH--HHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCC-eeCCCCCCccccCCHHHHHHHHhcC
Confidence            556666666677776  566666677777777777777777777777766666 777  56777777777777776654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.68  E-value=3.9e-17  Score=76.99  Aligned_cols=56  Identities=27%  Similarity=0.505  Sum_probs=50.6

Q ss_pred             ccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         39 VHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        39 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |++||.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|+++||
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKP-YKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCC-EECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCC-cCCCCCcchhCCHHHHHHHHHHhc
Confidence            46899999999999999999999999999888 999999999999999999999987

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=6.6e-17  Score=84.03  Aligned_cols=73  Identities=21%  Similarity=0.255  Sum_probs=65.4

Q ss_pred             ccccccchhhhhhhccccccccCeeecccccccc-ccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHH-HhhcC
Q psy12015         19 DFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGY-RYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTH-MAIKH   95 (96)
Q Consensus        19 ~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f-~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h-~r~~h   95 (96)
                      ...+.....+..|.  +.+.++++|.|..|++.| ....+|..|+++| ++++ |.|..|++.|.....|..| +++|.
T Consensus        13 ~~~~~~~~~~~~~~--~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~-~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           13 PPVYAAGSLEEQWY--LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM-FTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             CCSSCTTCHHHHHH--HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCC-CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCCCchHHHHHH--HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC-eECCCCCCeeCCHHHHHHHhHHhcC
Confidence            44566777788888  888999999999999999 9999999999999 8888 9999999999999999999 77764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.67  E-value=4.2e-17  Score=93.49  Aligned_cols=76  Identities=20%  Similarity=0.420  Sum_probs=63.8

Q ss_pred             ccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .+++.|.....|..|+  ++|.++++|.|..|++.|.....|..|++.|.+.++ |.|+.|++.|.....|..|+++|+
T Consensus       110 ~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~-~~C~~C~~~f~~~~~L~~H~~~H~  185 (190)
T 2i13_A          110 ECGKSFSQLAHLRAHQ--RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKP-YKCPECGKSFSRRDALNVHQRTHT  185 (190)
T ss_dssp             TTCCEESSHHHHHHHH--HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EECTTTCCEESSHHHHHHHHTTC-
T ss_pred             CCCCccCCHHHHHHHH--HHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC-eECCCCCCccCCHHHHHHHHHhcC
Confidence            3677788888888888  788888888888888888888888888888888777 888888888888888888888875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=7.9e-17  Score=78.97  Aligned_cols=59  Identities=25%  Similarity=0.531  Sum_probs=55.9

Q ss_pred             cccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         36 VLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        36 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .++++++|.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++||
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~~~f~~~~~L~~H~~~h~   61 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKHMKKFH   61 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCS-EECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-EeCCCCCCccCCHHHHHHHHHHHh
Confidence            57789999999999999999999999999999888 999999999999999999999876

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=2e-17  Score=88.07  Aligned_cols=86  Identities=15%  Similarity=0.097  Sum_probs=72.9

Q ss_pred             EEEeecCcccc--cccccccchhhhhhhcccc--ccccCeee-cccccccc--ccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015          7 VMFVRKGTNTK--LDFGVIRNSSVDKSLNTNV--LTVHIDLK-CDVCEKGY--RYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus         7 ~~~~~~~~~~~--~~~~~~~~~~~~~h~~~~~--~~~~~~~~-c~~c~~~f--~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      +++.++.+..+  +++.|.....|..|+  ++  +.+++++. |..|++.|  .....|..|+++|.++++ |.|..|++
T Consensus        12 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~--~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~-~~C~~C~k   88 (115)
T 2dmi_A           12 SIFTGASKFRCKDCSAAYDTLVELTVHM--NETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV-LKCMYCGH   88 (115)
T ss_dssp             CCCCCCCSEEBSSSSCEESSHHHHHHHH--HHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS-CBCSSSCC
T ss_pred             eeeCCCCCEECCccCchhcCHHHHHHHH--HHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc-eECCCCCC
Confidence            34455544433  788999999999999  66  77777655 99999998  888999999999999888 99999999


Q ss_pred             CCCCchhHHHHHhhcC
Q psy12015         80 RSKHKAHLTTHMAIKH   95 (96)
Q Consensus        80 ~f~~~~~l~~h~r~~h   95 (96)
                      .|.....|..|+++||
T Consensus        89 ~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           89 SFESLQDLSVHMIKTK  104 (115)
T ss_dssp             BCSSHHHHHHHHHHTT
T ss_pred             ccCCHHHHHHHHHHhC
Confidence            9999999999999876

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.65  E-value=1.1e-16  Score=85.43  Aligned_cols=75  Identities=24%  Similarity=0.437  Sum_probs=71.1

Q ss_pred             cccccccchhhhhhhccccccccCeeecc--ccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCD--VCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +++.|.....|..|+  +.|.++++|.|.  .|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus        14 C~~~f~~~~~l~~H~--~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~   90 (119)
T 2jp9_A           14 CNKRYFKLSHLQMHS--RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP-FQCKTCQRKFSRSDHLKTHTRTHT   90 (119)
T ss_dssp             SCCCBSCHHHHHHHH--HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcchhCCHHHHHHHH--HhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC-ccCCccCchhCCHHHHHHHHHHhc
Confidence            788999999999999  889999999999  799999999999999999999888 999999999999999999999875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=1.6e-16  Score=80.83  Aligned_cols=60  Identities=22%  Similarity=0.365  Sum_probs=54.9

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..+.+.++|.|..|++.|.....|..|+++|.++++ |.|..|++.|.....|.+|++..|
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQV-FPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSS-EECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCc-cCCCCCCCEeCCHHHHHHhCcccC
Confidence            566778899999999999999999999999999888 999999999999999999986543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2e-16  Score=80.07  Aligned_cols=66  Identities=21%  Similarity=0.261  Sum_probs=59.7

Q ss_pred             hhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCC----CCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         27 SVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ----EPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        27 ~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~----~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++..|+  ++|++++||.|..|++.|.....|..|++.+.+.    ++ |.|..|++.|.....|..|+++|+
T Consensus         2 s~~~H~--~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~-~~C~~C~~~f~~~~~L~~H~~~h~   71 (86)
T 1x6h_A            2 SSGSSG--RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA-FVCSKCGKTFTRRNTMARHADNCA   71 (86)
T ss_dssp             TTTCCS--TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCC-EECSSSCCEESCHHHHHHHHHHCC
T ss_pred             Cccccc--ceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcc-eECCCCCChhCCHHHHHHHHHHcc
Confidence            456788  8999999999999999999999999999877665    56 999999999999999999999886

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=1.6e-16  Score=79.31  Aligned_cols=59  Identities=20%  Similarity=0.396  Sum_probs=54.3

Q ss_pred             cccccCeeeccccccccccchhHHHHhhhhcC---CCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         36 VLTVHIDLKCDVCEKGYRYKTGLWRHKKFECG---QEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        36 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~---~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +|++++||.|..|++.|.....|..|++.|.+   .++ |.|..|++.|.....|.+|++.+|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~-~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCC-EECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcc-cCCCCCCchhCCHHHHHHHHHHhC
Confidence            47889999999999999999999999999986   677 999999999999999999997665

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.9e-16  Score=87.26  Aligned_cols=76  Identities=20%  Similarity=0.373  Sum_probs=64.6

Q ss_pred             cccccccchhhhhhhccccccccCeeeccc--cccccccchhHHHHh-hhhcCCCCceeCCC--CCCCCCCchhHHHHHh
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDV--CEKGYRYKTGLWRHK-KFECGQEPKYQCPH--CPHRSKHKAHLTTHMA   92 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~-~~~~~~~~~~~C~~--c~~~f~~~~~l~~h~r   92 (96)
                      +++.|.....|..|+  ++|.++++|.|..  |++.|....+|..|+ +.|.+.++ |.|..  |++.|.....|..|++
T Consensus        75 C~~~f~~~~~l~~H~--~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~-~~C~~~~C~~~f~~~~~L~~H~~  151 (155)
T 2gli_A           75 CRKSYSRLENLKTHL--RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP-YVCKLPGCTKRYTDPSSLRKHVK  151 (155)
T ss_dssp             CCCCCSSHHHHHHHH--HHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCC-EECCSTTTCCEESSHHHHHHHHH
T ss_pred             CCCcccCHHHHHHHH--HHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCC-eeCCCCCCccccCCHHHHHHHHH
Confidence            678888888888888  7888888888887  888888888888888 67888777 88887  8888888888888888


Q ss_pred             hcCC
Q psy12015         93 IKHY   96 (96)
Q Consensus        93 ~~h~   96 (96)
                      +||.
T Consensus       152 ~hhg  155 (155)
T 2gli_A          152 TVHG  155 (155)
T ss_dssp             HSCC
T ss_pred             hhcC
Confidence            8873

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=5.2e-16  Score=83.29  Aligned_cols=78  Identities=24%  Similarity=0.437  Sum_probs=59.6

Q ss_pred             ccccccccchhhhhhhccc-cccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         17 KLDFGVIRNSSVDKSLNTN-VLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~-~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .+++.|.....|..|+... .+.++++|.|..|++.|.....|..|++.|.++++ |.|..|++.|.....|..|++..|
T Consensus        40 ~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           40 KCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMP-YKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             TTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCS-EECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-ccCCCccchhCCHHHHHHHHHHHC
Confidence            3667777777788887211 35677788888888888888888888888888777 888888888888888888887544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.63  E-value=3.5e-16  Score=77.38  Aligned_cols=60  Identities=33%  Similarity=0.671  Sum_probs=55.9

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..+.++++|.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|.+|+++|+
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   69 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRPANLKTHTRIHS   69 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS-EECTTTCCEESCHHHHHHHHHHHC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCC-EECCCCCchhCCHHHHHHHHHhcC
Confidence            456788999999999999999999999999999888 999999999999999999999886

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.63  E-value=1.5e-16  Score=87.13  Aligned_cols=60  Identities=22%  Similarity=0.336  Sum_probs=57.4

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .++.|+++|.|..|++.|.....|..|+++|.++++ |.|..|++.|.....|..|+++|.
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   74 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKK-YPCRYCEKVFPLAEYRTKHEIHHT   74 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSC-EECSSSSCEESSHHHHHHHHHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCC-eeCCccCeecccccchhhhccccC
Confidence            789999999999999999999999999999999888 999999999999999999999874

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.63  E-value=4.3e-16  Score=83.76  Aligned_cols=77  Identities=21%  Similarity=0.477  Sum_probs=63.4

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccc--cccccccchhHHHHhhhhcCCCCceeCC--CCCCCCCCchhHHHHH
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDV--CEKGYRYKTGLWRHKKFECGQEPKYQCP--HCPHRSKHKAHLTTHM   91 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~~C~--~c~~~f~~~~~l~~h~   91 (96)
                      ..+++.|.....|..|+  ..|.++++|.|..  |++.|.....|..|++.|.++++ |.|+  .|++.|.....|..|+
T Consensus        38 ~~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~  114 (124)
T 1ubd_C           38 AECGKAFVESSKLKRHQ--LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP-YVCPFDGCNKKFAQSTNLKSHI  114 (124)
T ss_dssp             TTTCCEESSHHHHHHHG--GGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCC-CCCCSTTCCCCCSSTTTTHHHH
T ss_pred             CCCCchhCCHHHHHHHH--HHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCc-eECCCCCCCCccCCHHHHHHHH
Confidence            33677888888888888  7888888888875  88888888888888888888777 8885  4888888888888888


Q ss_pred             hhcC
Q psy12015         92 AIKH   95 (96)
Q Consensus        92 r~~h   95 (96)
                      ++|+
T Consensus       115 ~~H~  118 (124)
T 1ubd_C          115 LTHA  118 (124)
T ss_dssp             HHHC
T ss_pred             HHHc
Confidence            8875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.63  E-value=3.2e-16  Score=79.07  Aligned_cols=74  Identities=22%  Similarity=0.396  Sum_probs=69.2

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccc--cccccccchhHHHHhhhhcCCCCceeCCC---CCCCCCCchhHHHH
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDV--CEKGYRYKTGLWRHKKFECGQEPKYQCPH---CPHRSKHKAHLTTH   90 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~~C~~---c~~~f~~~~~l~~h   90 (96)
                      ..+++.|.....|..|+  ++|.+++||.|..  |++.|.....|..|++.|.+    |.|..   |++.|.....|..|
T Consensus         7 ~~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~~l~~H   80 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQ--FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTLYLKH   80 (85)
T ss_dssp             TTCCCEESSHHHHHHHH--HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHH--HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHHHHHHH
Confidence            34788899999999999  8999999999988  99999999999999999988    89999   99999999999999


Q ss_pred             HhhcC
Q psy12015         91 MAIKH   95 (96)
Q Consensus        91 ~r~~h   95 (96)
                      +++||
T Consensus        81 ~~~hh   85 (85)
T 2j7j_A           81 VAECH   85 (85)
T ss_dssp             HHHCC
T ss_pred             HHhcC
Confidence            99987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=6.2e-16  Score=76.23  Aligned_cols=66  Identities=29%  Similarity=0.572  Sum_probs=58.1

Q ss_pred             hhhhhccccccccCeeecc--ccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         28 VDKSLNTNVLTVHIDLKCD--VCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        28 ~~~h~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +..+.+ .+++++++|.|.  .|++.|.....|..|++.|.+.++ |.|..|++.|.....|.+|+++|+
T Consensus         6 ~~~~~~-~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLN-YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKP-FQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTS-CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhh-ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC-eECCCCCchhCCHHHHHHHHHhcC
Confidence            344443 678899999997  699999999999999999999888 999999999999999999999874

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=6.9e-16  Score=76.87  Aligned_cols=60  Identities=25%  Similarity=0.563  Sum_probs=56.0

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..+.++++|.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|.+|+++|+
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~~~H~   70 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP-YKCDECGKAFIQRSHLIGHHRVHT   70 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS-EECSSSCCEESSHHHHHHHGGGSC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcC-eeCCCCCCccCCHHHHHHHHHHhC
Confidence            456778999999999999999999999999999888 999999999999999999999886

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.61  E-value=3.8e-16  Score=86.92  Aligned_cols=77  Identities=19%  Similarity=0.383  Sum_probs=67.1

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccc--cccccccchhHHHHhhhhcCCCCceeCCC--CCCCCCCchhHHHHH
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDV--CEKGYRYKTGLWRHKKFECGQEPKYQCPH--CPHRSKHKAHLTTHM   91 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~~C~~--c~~~f~~~~~l~~h~   91 (96)
                      ..+++.|.....|..|+  ++|.++++|.|..  |++.|.....|..|++.|.+.++ |.|..  |++.|.....|..|+
T Consensus        66 ~~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~-~~C~~~~C~k~f~~~~~L~~H~  142 (155)
T 2rpc_A           66 PREGKSFKAKYKLVNHI--RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM  142 (155)
T ss_dssp             TTSSCCCSSHHHHHHHT--HHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCS-BCCSSTTCCCCBSSHHHHHHSS
T ss_pred             CCcccccCCHHHHHHHH--HhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCC-ccCCCCCCCCccCCHHHHHHHH
Confidence            33678888888899998  7888889999987  99999999999999999988888 99986  999999999999999


Q ss_pred             hhcC
Q psy12015         92 AIKH   95 (96)
Q Consensus        92 r~~h   95 (96)
                      ++|+
T Consensus       143 ~~H~  146 (155)
T 2rpc_A          143 HVHT  146 (155)
T ss_dssp             TTTT
T ss_pred             HHhc
Confidence            8876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.60  E-value=1.1e-15  Score=82.17  Aligned_cols=75  Identities=27%  Similarity=0.395  Sum_probs=69.5

Q ss_pred             ccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC--CCCCCCCchhHHHHHhhc
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH--CPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~--c~~~f~~~~~l~~h~r~~   94 (96)
                      .+++.|.....|..|+  .+| ++++|.|..|++.|.....|..|++.|.+.++ |.|..  |++.|.....|..|+++|
T Consensus        12 ~C~~~f~~~~~l~~H~--~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h   87 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHL--HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP-FQCTFEGCGKRFSLDFNLRTHVRIH   87 (124)
T ss_dssp             TCCCEESSHHHHHHHH--GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCC-EECCSTTCCCEESCHHHHHHHHHHH
T ss_pred             CCcCccCCHHHHHHHH--HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-eeCCCCCCcCccCCHHHHHHHHHHh
Confidence            5788899999999999  778 78999999999999999999999999999888 99986  999999999999999987


Q ss_pred             C
Q psy12015         95 H   95 (96)
Q Consensus        95 h   95 (96)
                      +
T Consensus        88 ~   88 (124)
T 1ubd_C           88 T   88 (124)
T ss_dssp             H
T ss_pred             C
Confidence            5

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.60  E-value=8.7e-16  Score=88.01  Aligned_cols=74  Identities=26%  Similarity=0.500  Sum_probs=46.8

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      +++.|.....|..|+  +.|.++++|.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|
T Consensus        27 C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h  100 (190)
T 2i13_A           27 CGKSFSRSDHLAEHQ--RTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKP-YKCPECGKSFSQRANLRAHQRTH  100 (190)
T ss_dssp             ----CCSSHHHHHGG--GCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHH
T ss_pred             CccccCCHHHHHHHH--HHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCC-ccCcccCCccCCHHHHHHHHHhc
Confidence            556666666777777  666667777777777777777777777777666666 77777777777777776666654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.3e-15  Score=81.68  Aligned_cols=77  Identities=17%  Similarity=0.281  Sum_probs=70.1

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhh---hcCCCCceeCCCCCCCCCCchhHHHHHh
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKF---ECGQEPKYQCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~---~~~~~~~~~C~~c~~~f~~~~~l~~h~r   92 (96)
                      ..+++.|.....|..|+  +.|.++++|.|..|++.|.....|..|++.   +.+.++ |.|..|++.|.....|..|++
T Consensus        11 ~~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~-~~C~~C~~~f~~~~~l~~H~~   87 (124)
T 2dlq_A           11 PTCHKKFLSKYYLKVHN--RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-FTCSVCQETFRRRMELRLHMV   87 (124)
T ss_dssp             TTTCCCCSSHHHHHHHH--HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC-EECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHH--HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC-eECCCCCCccCCHHHHHHHHH
Confidence            34788899999999999  899999999999999999999999999985   466677 999999999999999999999


Q ss_pred             hcC
Q psy12015         93 IKH   95 (96)
Q Consensus        93 ~~h   95 (96)
                      +|+
T Consensus        88 ~h~   90 (124)
T 2dlq_A           88 SHT   90 (124)
T ss_dssp             HHS
T ss_pred             HcC
Confidence            875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.59  E-value=1.7e-15  Score=71.22  Aligned_cols=53  Identities=28%  Similarity=0.512  Sum_probs=50.2

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ||.|..|++.|.....|..|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP-YHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC-EECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC-ccCCCCCchhcCHHHHHHHHHHhc
Confidence            68899999999999999999999999888 999999999999999999999886

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.58  E-value=1.4e-15  Score=82.45  Aligned_cols=71  Identities=17%  Similarity=0.295  Sum_probs=62.1

Q ss_pred             cccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcCC
Q psy12015         20 FGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKHY   96 (96)
Q Consensus        20 ~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h~   96 (96)
                      ..|.....+..|+   .|++++||.|..|++.|.....|..|+++|  .++ |.|..|++.|.....|.+|+++||.
T Consensus        55 ~~~~~~~~l~~h~---~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~-~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           55 QLLDESSYLYRLL---ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHT-KVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             GGTTTHHHHHHHH---HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCC-CBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             cccCCHHHHHHHH---HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCC-CCCCCCCcccCCHHHHHHHHHHHCC
Confidence            3445556677776   488899999999999999999999999998  577 9999999999999999999999873

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=4.6e-16  Score=81.90  Aligned_cols=72  Identities=11%  Similarity=0.123  Sum_probs=65.1

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhh
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      ..+++.|.....|..|+  ++|  +++|.|..|++.|.....|..|++ |.++++ |.|..|++.|.....|..|++.
T Consensus        20 ~~C~~~f~~~~~l~~H~--~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~-~~C~~C~~~f~~~~~L~~H~~~   91 (107)
T 1wjp_A           20 RLCNAKLSSLLEQGSHE--RLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKK-LTCLECMRTFKSSFSIWRHQVE   91 (107)
T ss_dssp             TTTCCBCSSHHHHHHHH--HHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGG-GEEGGGTEECSSHHHHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHH--HHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCC-ccCccccchhCCHHHHHHHHHH
Confidence            34788899999999999  677  468999999999999999999996 988888 9999999999999999999983

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.3e-15  Score=75.12  Aligned_cols=62  Identities=16%  Similarity=0.263  Sum_probs=57.4

Q ss_pred             cccccccchhhhhhhccc-cccccCeeeccc--cccccccchhHHHHhhhhcCCCCceeCCCCCCCCC
Q psy12015         18 LDFGVIRNSSVDKSLNTN-VLTVHIDLKCDV--CEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSK   82 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~-~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~   82 (96)
                      +++.|.....|..|+  + .|.++++|.|..  |++.|.....|..|+++|.++++ |.|..|++.|.
T Consensus        15 C~~~f~~~~~L~~H~--~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~k~F~   79 (79)
T 2dlk_A           15 CGRIFSNRQYLNHHK--KYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEFSGPSSG   79 (79)
T ss_dssp             TCCEESSHHHHHHHH--HHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCCSSSCCCC
T ss_pred             CcCccCCHHHHHHHH--HHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC-eeCCCCCCCCC
Confidence            788899999999999  6 799999999998  99999999999999999999888 99999999883

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.54  E-value=7.3e-15  Score=74.82  Aligned_cols=76  Identities=14%  Similarity=0.176  Sum_probs=64.4

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..+++.|.....|..|+  ++|.+++||.|..|++.|.....|..|++.+.+ .+ |.|..|++.|.....|..|++..|
T Consensus         7 ~~C~k~f~~~~~L~~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~-~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C            7 RICMRNFSRSDHLTTHI--RTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LP-ILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             TTTCCEESCHHHHHHHH--HHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHH--HHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-Cc-chHHHHHHHHHHHhhhHHHHHHHH
Confidence            34678888888899998  788888899999999999999999999888775 56 889999999999999998888654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=9.3e-15  Score=69.37  Aligned_cols=53  Identities=25%  Similarity=0.570  Sum_probs=48.9

Q ss_pred             CeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHh-hc
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMA-IK   94 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r-~~   94 (96)
                      +||.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|++ +|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~~H   54 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP-YPCGLCNRAFTRRDLLIRHAQKIH   54 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS-EECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC-ccCCCCCCccCCHHHHHHHHHHHc
Confidence            479999999999999999999999999888 999999999999999999974 44

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.1e-14  Score=76.41  Aligned_cols=60  Identities=17%  Similarity=0.209  Sum_probs=43.6

Q ss_pred             ccccccCeeeccccccccccchhHHHHhh-hh---cCCCCceeCCCCCCCCCCchhHHHH-HhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKK-FE---CGQEPKYQCPHCPHRSKHKAHLTTH-MAIKH   95 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~---~~~~~~~~C~~c~~~f~~~~~l~~h-~r~~h   95 (96)
                      ...+|++||.|..|++.|.....|..|++ .|   .++++ |.|..||+.|.....|..| +++|.
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekp-f~C~~Cgk~F~~~~~L~~H~~r~Ht   75 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSS-YVCVECNFLTKRYDALSEHNLKYHP   75 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCC-EEETTTTEEESSTHHHHTHHHHTST
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCC-cCCCCCCcccCCHHHHHHHHHHhcC
Confidence            44567778888888888887777888876 36   34555 8888888888888888777 66654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.51  E-value=6.7e-17  Score=82.48  Aligned_cols=55  Identities=20%  Similarity=0.530  Sum_probs=52.4

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++||.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++||
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~h~   55 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDERKRHRDIQH   55 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCC-ccCCCCCCccCCHHHHHHHHHHhC
Confidence            5799999999999999999999999999888 999999999999999999999876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.4e-14  Score=80.45  Aligned_cols=73  Identities=21%  Similarity=0.324  Sum_probs=65.6

Q ss_pred             ccccccchhhhhhhccccccccCeeeccc--cccccccchhHHHHhhhhcCCCCceeCCC--CCCCCCCchhHHHHH-hh
Q psy12015         19 DFGVIRNSSVDKSLNTNVLTVHIDLKCDV--CEKGYRYKTGLWRHKKFECGQEPKYQCPH--CPHRSKHKAHLTTHM-AI   93 (96)
Q Consensus        19 ~~~~~~~~~~~~h~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~~C~~--c~~~f~~~~~l~~h~-r~   93 (96)
                      ++.|.....|..|+  +.|.+++||.|..  |++.|.....|..|++.|.+.++ |.|+.  |++.|.....|..|+ ++
T Consensus        46 ~~~f~~~~~l~~H~--~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~~  122 (155)
T 2gli_A           46 LRPFKAQYMLVVHM--RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP-YMCEHEGCSKAFSNASDRAKHQNRT  122 (155)
T ss_dssp             TCCCSSHHHHHHHT--HHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCC-EECCSTTCCCEESSSSTTHHHHHHT
T ss_pred             hhhhhhHHHHHHHH--HhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCC-eeCCCCCCCCccCCHHHHHHHHHHh
Confidence            47788889999999  8899999999984  99999999999999999999888 99998  999999999999998 55


Q ss_pred             c
Q psy12015         94 K   94 (96)
Q Consensus        94 ~   94 (96)
                      |
T Consensus       123 H  123 (155)
T 2gli_A          123 H  123 (155)
T ss_dssp             T
T ss_pred             c
Confidence            5

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.50  E-value=2e-14  Score=82.33  Aligned_cols=76  Identities=24%  Similarity=0.447  Sum_probs=45.9

Q ss_pred             cccccccchhhhhhhccccc-cccCeeec--cccccccccchhHHHHhhhhcCCCCceeCCC--CCCCCCCchhHHHHHh
Q psy12015         18 LDFGVIRNSSVDKSLNTNVL-TVHIDLKC--DVCEKGYRYKTGLWRHKKFECGQEPKYQCPH--CPHRSKHKAHLTTHMA   92 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~-~~~~~~~c--~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~--c~~~f~~~~~l~~h~r   92 (96)
                      +++.|.....|..|+. ..| .++++|.|  ..|++.|.....|..|+++|.+.++ |.|+.  |++.|.....|..|++
T Consensus        80 C~~~f~~~~~l~~H~~-~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~~C~k~F~~~~~L~~H~~  157 (190)
T 1tf6_A           80 CDLRFTTKANMKKHFN-RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEK  157 (190)
T ss_dssp             CCCEESCHHHHHHHHH-TTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCS-SBCCSSSCCCBCSSHHHHHHHHT
T ss_pred             CCCccCCHHHHHHHHH-HhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCC-ccCCCCCCCchhcCHHHHHHHHH
Confidence            4555666666666652 233 34556666  5666666666666666666666555 66655  6666666666666666


Q ss_pred             hcC
Q psy12015         93 IKH   95 (96)
Q Consensus        93 ~~h   95 (96)
                      +|+
T Consensus       158 ~H~  160 (190)
T 1tf6_A          158 VHA  160 (190)
T ss_dssp             SSC
T ss_pred             HhC
Confidence            554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.50  E-value=2.6e-14  Score=79.43  Aligned_cols=77  Identities=17%  Similarity=0.293  Sum_probs=69.4

Q ss_pred             cccccccccchhhhhhhcccc-ccccCe--------eeccccccccccchhHHHHhhhhcCCCCceeCCC--CCCCCCCc
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNV-LTVHID--------LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH--CPHRSKHK   84 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~-~~~~~~--------~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~--c~~~f~~~   84 (96)
                      ..+++.|.....|..|+  .. |.++.+        +.|..|++.|.....|..|++.|.+.++ |.|..  |++.|...
T Consensus        29 ~~C~~~f~~~~~L~~H~--~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~  105 (155)
T 2rpc_A           29 KSCDRTFSTMHELVTHV--TMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP-FPCPFPGCGKIFARS  105 (155)
T ss_dssp             CCCCCCBSSHHHHHHHH--HTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCS-EECSCTTTCCEESCH
T ss_pred             ccCCcccCCHHHHHHHH--HhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCc-ccCCcCCCCCccCCH
Confidence            34788999999999999  55 777654        7899999999999999999999999888 99998  99999999


Q ss_pred             hhHHHHHhhcC
Q psy12015         85 AHLTTHMAIKH   95 (96)
Q Consensus        85 ~~l~~h~r~~h   95 (96)
                      ..|..|+++|+
T Consensus       106 ~~L~~H~~~h~  116 (155)
T 2rpc_A          106 ENLKIHKRTHT  116 (155)
T ss_dssp             HHHHHHHTTTC
T ss_pred             HHHHHHHHhhC
Confidence            99999999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.49  E-value=1e-14  Score=69.56  Aligned_cols=52  Identities=15%  Similarity=0.112  Sum_probs=48.6

Q ss_pred             ccccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         15 NTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        15 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      ...+++.|...+.|..|+  ++|++++||.|..|++.|....+|..|+++|+|+
T Consensus         7 C~~C~k~F~~~~~L~~H~--~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            7 CNFCGKTYRDASGLSRHR--RAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CTTTCCEESSHHHHHHHH--HHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCCCCEeCCHHHHHHHH--HHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            345889999999999999  8999999999999999999999999999999984

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=2.7e-14  Score=69.14  Aligned_cols=55  Identities=20%  Similarity=0.423  Sum_probs=50.8

Q ss_pred             ccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC-CCCCCCCCchhHHHHHhhc
Q psy12015         37 LTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP-HCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        37 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~-~c~~~f~~~~~l~~h~r~~   94 (96)
                      ..+++||.|..|++.|. ...|..|+++ .++++ |.|. .|++.|.....|..|+++|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p-~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP-VACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSE-EECTTCCSCCEEETTTHHHHHHTT
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcC-ccCCcccCcccccHHHHHHHHHhh
Confidence            45688999999999999 9999999998 88777 9999 9999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.48  E-value=3.2e-14  Score=81.47  Aligned_cols=71  Identities=25%  Similarity=0.415  Sum_probs=38.1

Q ss_pred             cccccccchhhhhhhccccccccCeeec--cccccccccchhHHHHhhhhcCCCCceeCC--CCCCCCCCchhHHHHH
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKC--DVCEKGYRYKTGLWRHKKFECGQEPKYQCP--HCPHRSKHKAHLTTHM   91 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c--~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~--~c~~~f~~~~~l~~h~   91 (96)
                      +++.|.....|..|+  +.|.++++|.|  ..|++.|.....|..|++.|.+.++ |.|.  .|++.|.+...|..|+
T Consensus        20 C~~~f~~~~~L~~H~--~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~   94 (190)
T 1tf6_A           20 CGAAYNKNWKLQAHL--CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN-FTCDSDGCDLRFTTKANMKKHF   94 (190)
T ss_dssp             TCCBCSSHHHHHHHH--HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCC-EECCSSSCCCEESCHHHHHHHH
T ss_pred             CcchhCCHHHHHHHH--HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCc-eeCCCCCCCCccCCHHHHHHHH
Confidence            445555555555555  45555555555  4455555555555555555555444 5555  4555555555555555

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=7.2e-15  Score=78.11  Aligned_cols=70  Identities=17%  Similarity=0.149  Sum_probs=61.2

Q ss_pred             cchhhhhhhccccccccCeeeccccccccccchhHHHHhhh--hcCCCCceeCCCCCCCC--CCchhHHHHHhhcC
Q psy12015         24 RNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKF--ECGQEPKYQCPHCPHRS--KHKAHLTTHMAIKH   95 (96)
Q Consensus        24 ~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~--~~~~~~~~~C~~c~~~f--~~~~~l~~h~r~~h   95 (96)
                      +.+.|..|+  ++|++++||.|..|++.|.....|..|++.  +.+.++.+.|..|++.|  .....|..|+++|+
T Consensus         3 s~~~l~~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~   76 (115)
T 2dmi_A            3 SGSSGKLYG--SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED   76 (115)
T ss_dssp             CCCCCCCCC--CCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred             cchhhhhhe--eeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence            456788999  899999999999999999999999999998  76666634599999998  88999999988774

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=8e-14  Score=73.49  Aligned_cols=59  Identities=31%  Similarity=0.487  Sum_probs=55.5

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..|+++++|.| .|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~   61 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHHLVGHMKIHT   61 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHHHHHHHTTTC
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcC-ccCCCCCcccCCHHHHHHHHHHcC
Confidence            46889999999 999999999999999999999888 999999999999999999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.2e-13  Score=70.91  Aligned_cols=57  Identities=32%  Similarity=0.610  Sum_probs=53.9

Q ss_pred             cccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         38 TVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        38 ~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +++++|.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~   59 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKP-YSCPVCGLRFKRKDRMSYHVRSHD   59 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCS-EECSSSCCEESCHHHHHHHHHHHC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCC-CcCCCCCCccCCHHHHHHHHHHhc
Confidence            568899999999999999999999999999888 999999999999999999999875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.5e-13  Score=70.75  Aligned_cols=58  Identities=28%  Similarity=0.542  Sum_probs=54.4

Q ss_pred             ccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         37 LTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        37 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..++++|.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~   60 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-YKCKTCDYAAADSSSLNKHLRIHS   60 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCS-EECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCC-EeCCCCCCccCCHHHHHHHHHHhC
Confidence            4678899999999999999999999999999888 999999999999999999999875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.42  E-value=2.4e-13  Score=66.65  Aligned_cols=59  Identities=22%  Similarity=0.407  Sum_probs=53.5

Q ss_pred             ccccccCeeeccc--cccccccchhHHHHhhhhcCCCCceeCCC--CCCCCCCchhHHHHHhhc
Q psy12015         35 NVLTVHIDLKCDV--CEKGYRYKTGLWRHKKFECGQEPKYQCPH--CPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        35 ~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~~C~~--c~~~f~~~~~l~~h~r~~   94 (96)
                      ......++|.|..  |++.|.....|..|++.|.++++ |.|..  |++.|.....|.+|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS-EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCC-ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4556678999988  99999999999999999999888 99965  999999999999999875

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1e-13  Score=62.46  Aligned_cols=45  Identities=16%  Similarity=0.132  Sum_probs=41.8

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoo_A            2 SSG--SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS-SGPSSG   46 (46)
T ss_dssp             CCC--CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTS-SCCSCC
T ss_pred             CCC--CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            466  889999999999999999999999999999999888 999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.5e-13  Score=61.25  Aligned_cols=42  Identities=19%  Similarity=0.300  Sum_probs=40.0

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      ++|++++||.|..|++.|....+|..|+++|.++++ |.|..|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP-SGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCS-CSCCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            789999999999999999999999999999999888 999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.8e-13  Score=61.59  Aligned_cols=44  Identities=25%  Similarity=0.362  Sum_probs=41.2

Q ss_pred             hhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         31 SLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        31 h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      |+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         3 h~--~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2elz_A            3 SG--SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT-SGPSSG   46 (46)
T ss_dssp             CC--SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC-CCSCCC
T ss_pred             CC--CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            55  889999999999999999999999999999999888 999877

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.41  E-value=2.5e-13  Score=63.22  Aligned_cols=48  Identities=21%  Similarity=0.339  Sum_probs=44.3

Q ss_pred             ccccccCeeeccccccccccchhHHHHhh-hhcCCCCceeCCCCCCCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKK-FECGQEPKYQCPHCPHRSKH   83 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~~C~~c~~~f~~   83 (96)
                      ..+++++||.|..|++.|.....|..|++ +|.++++ |.|..|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~-~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCC-ccCCCCCCCCCC
Confidence            46788999999999999999999999997 8999888 999999999975

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.6e-13  Score=61.73  Aligned_cols=45  Identities=22%  Similarity=0.346  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eml_A            2 SSG--SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCC-SCSSCC
T ss_pred             Ccc--CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.5e-13  Score=61.86  Aligned_cols=45  Identities=22%  Similarity=0.288  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+.|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emy_A            2 SSG--SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCC-SCSSCC
T ss_pred             CCC--CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCC-CCCCCC
Confidence            456  889999999999999999999999999999999888 999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.6e-13  Score=61.78  Aligned_cols=45  Identities=24%  Similarity=0.322  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emf_A            2 SSG--SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSC-SCCCCC
T ss_pred             ccc--cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.7e-13  Score=61.72  Aligned_cols=45  Identities=24%  Similarity=0.320  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|....+|..|+++|.++++ |.|.+|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytn_A            2 SSG--SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC-CSCCCC
T ss_pred             CCC--cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCC-CCCCCC
Confidence            355  889999999999999999999999999999999888 999876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.40  E-value=1.5e-13  Score=61.85  Aligned_cols=45  Identities=22%  Similarity=0.246  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2el4_A            2 SSG--SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCC-SCCTTC
T ss_pred             ccc--cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            456  889999999999999999999999999999999888 999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.40  E-value=1.9e-13  Score=61.50  Aligned_cols=45  Identities=24%  Similarity=0.325  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+.|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ema_A            2 SSG--SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSC--SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCC-CSSSCC
T ss_pred             CCc--cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.4e-13  Score=61.95  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emp_A            2 SSG--SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSC-CSCCCC
T ss_pred             Ccc--cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            466  889999999999999999999999999999999888 999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.8e-13  Score=61.58  Aligned_cols=45  Identities=22%  Similarity=0.355  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|++|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ep2_A            2 SSG--SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSS--SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCS-CCSCCC
T ss_pred             CCC--CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            466  889999999999999999999999999999999888 999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.40  E-value=2e-13  Score=61.51  Aligned_cols=45  Identities=27%  Similarity=0.370  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ely_A            2 SSG--SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS-CSCCCC
T ss_pred             CCC--CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.40  E-value=1.5e-13  Score=61.89  Aligned_cols=45  Identities=22%  Similarity=0.324  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emk_A            2 SSG--SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC-SSCCCC
T ss_pred             CCC--CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            466  889999999999999999999999999999999888 999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.7e-13  Score=61.63  Aligned_cols=45  Identities=27%  Similarity=0.353  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ene_A            2 SSG--SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCC-CSCCCC
T ss_pred             Ccc--cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCC-CCCCCC
Confidence            366  889999999999999999999999999999999888 999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.6e-13  Score=61.74  Aligned_cols=45  Identities=22%  Similarity=0.282  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eoe_A            2 SSG--SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKP-SGPSSG   46 (46)
T ss_dssp             CCS--SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCS-CSSCCC
T ss_pred             CCC--CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.7e-13  Score=61.69  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|....+|..|+++|.++++ |.|++|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ytj_A            2 SSG--SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP-SGPSSG   46 (46)
T ss_dssp             CSS--CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCC-SSCSCC
T ss_pred             Ccc--cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            466  889999999999999999999999999999999888 999876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.40  E-value=1.7e-13  Score=61.65  Aligned_cols=45  Identities=18%  Similarity=0.249  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+.|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em0_A            2 SSG--SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC-SCSSCC
T ss_pred             CCc--CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCC-cCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.8e-13  Score=61.52  Aligned_cols=45  Identities=20%  Similarity=0.215  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epw_A            2 SSG--SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH-SGPSSG   46 (46)
T ss_dssp             CCC--CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCC-SCCCCC
T ss_pred             cCc--ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            456  889999999999999999999999999999999888 999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.7e-13  Score=61.68  Aligned_cols=45  Identities=22%  Similarity=0.310  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emm_A            2 SSG--SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCT-TSSSCC
T ss_pred             CCc--CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999877

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.40  E-value=2.1e-13  Score=61.30  Aligned_cols=45  Identities=22%  Similarity=0.405  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em9_A            2 SSG--SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSC--CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC-CSTTCC
T ss_pred             CCC--CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            456  889999999999999999999999999999999888 999876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.8e-13  Score=61.60  Aligned_cols=45  Identities=24%  Similarity=0.320  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2yu8_A            2 SSG--SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCC-SCSCCC
T ss_pred             CcC--cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.1e-13  Score=61.33  Aligned_cols=45  Identities=24%  Similarity=0.291  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eov_A            2 SSG--SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH-SGPSSG   46 (46)
T ss_dssp             CCC--CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS-CCSCCC
T ss_pred             CCC--CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            466  889999999999999999999999999999999888 999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.6e-13  Score=61.79  Aligned_cols=45  Identities=24%  Similarity=0.369  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|++|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emh_A            2 SSG--SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSC-SSSCCC
T ss_pred             CCC--CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.9e-13  Score=61.48  Aligned_cols=45  Identities=27%  Similarity=0.324  Sum_probs=41.5

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2eq0_A            2 SSG--SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCC-SCCSCC
T ss_pred             CCC--cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            355  789999999999999999999999999999999888 999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.3e-13  Score=61.19  Aligned_cols=45  Identities=22%  Similarity=0.353  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eme_A            2 SSG--SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSC-CSSCCC
T ss_pred             CCC--CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            456  889999999999999999999999999999999888 999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.9e-13  Score=61.51  Aligned_cols=45  Identities=24%  Similarity=0.361  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytg_A            2 SSG--SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCS-SCSCCC
T ss_pred             CCC--CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            466  889999999999999999999999999999999888 999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.3e-13  Score=61.22  Aligned_cols=45  Identities=22%  Similarity=0.303  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytd_A            2 SSG--SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP-SGPSSG   46 (46)
T ss_dssp             CCC--CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCS-SCSSCC
T ss_pred             CCc--cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2e-13  Score=61.44  Aligned_cols=44  Identities=23%  Similarity=0.335  Sum_probs=41.2

Q ss_pred             hhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         31 SLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        31 h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      |+  ++|++++||.|..|++.|....+|..|+++|.++++ |.|..|
T Consensus         3 H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epz_A            3 SG--SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CC--SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC-CSSCCC
T ss_pred             CC--CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55  889999999999999999999999999999999888 999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=4.8e-13  Score=66.53  Aligned_cols=57  Identities=28%  Similarity=0.573  Sum_probs=52.6

Q ss_pred             cccCeeeccc--cccccccchhHHHHhh-hhcCCCCceeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         38 TVHIDLKCDV--CEKGYRYKTGLWRHKK-FECGQEPKYQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        38 ~~~~~~~c~~--c~~~f~~~~~l~~h~~-~~~~~~~~~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      +++++|.|..  |++.|.....|..|++ .|.+.++ |.|..  |++.|.....|.+|+++|+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~-~~C~~~~C~k~f~~~~~L~~H~~~H~   64 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKHLKEHMKLHS   64 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC-EECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC-eECCCCCCcCccCCHHHHHHHHHHhC
Confidence            5678999986  9999999999999999 7999888 99998  9999999999999999875

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.9e-13  Score=61.54  Aligned_cols=45  Identities=24%  Similarity=0.328  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoq_A            2 SSG--SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS-SSCCCC
T ss_pred             CCC--CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            456  889999999999999999999999999999999888 999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2e-13  Score=61.42  Aligned_cols=45  Identities=20%  Similarity=0.302  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|....+|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eq4_A            2 SSG--SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC-CCCCCC
T ss_pred             CCc--ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.1e-13  Score=61.39  Aligned_cols=45  Identities=20%  Similarity=0.262  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|++|
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~c   46 (46)
T 2ytk_A            2 SSG--SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSC-SSCCCC
T ss_pred             CCc--ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=2.5e-13  Score=61.11  Aligned_cols=44  Identities=25%  Similarity=0.405  Sum_probs=41.1

Q ss_pred             hhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         31 SLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        31 h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      |+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         3 H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2em7_A            3 SG--SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CC--CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCC-SSTTCC
T ss_pred             CC--CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            55  889999999999999999999999999999999888 999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.5e-13  Score=61.13  Aligned_cols=45  Identities=20%  Similarity=0.347  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2en1_A            2 SSG--SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CST--TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCC-SCCCCC
T ss_pred             Ccc--cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            466  889999999999999999999999999999999888 999876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.38  E-value=3.7e-13  Score=68.40  Aligned_cols=56  Identities=29%  Similarity=0.620  Sum_probs=51.0

Q ss_pred             ccCeeecc--ccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         39 VHIDLKCD--VCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        39 ~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |++||.|.  .|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~   58 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKP-FQCRICMRNFSRSDHLTTHIRTHT   58 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCCCCcccCCHHHHHHHHHHcC
Confidence            47899998  699999999999999999999888 999999999999999999999874

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=2.2e-13  Score=61.33  Aligned_cols=45  Identities=20%  Similarity=0.387  Sum_probs=41.7

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em5_A            2 SSG--SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCC-SSCCCC
T ss_pred             CCc--CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            366  889999999999999999999999999999999888 999877

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=2.8e-13  Score=60.95  Aligned_cols=45  Identities=16%  Similarity=0.137  Sum_probs=41.5

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2yso_A            2 SSG--SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKN-SGPSSG   46 (46)
T ss_dssp             CCS--CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSC-CCTTCC
T ss_pred             Ccc--cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            355  889999999999999999999999999999999888 999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.3e-13  Score=61.22  Aligned_cols=45  Identities=20%  Similarity=0.333  Sum_probs=41.5

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|....+|..|+++|.++++ |.|+.|
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eop_A            2 SSG--SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENP-SGPSSG   46 (46)
T ss_dssp             CCC--CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC-SCCCCC
T ss_pred             CCc--cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=2.4e-13  Score=61.13  Aligned_cols=45  Identities=20%  Similarity=0.270  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en8_A            2 SSG--SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC-SGPSSG   46 (46)
T ss_dssp             CCC--CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCS-SCCSCC
T ss_pred             Ccc--ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.4e-13  Score=61.25  Aligned_cols=44  Identities=23%  Similarity=0.277  Sum_probs=41.2

Q ss_pred             hhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         31 SLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        31 h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      |+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         3 h~--~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytm_A            3 SG--SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP-SGPSSG   46 (46)
T ss_dssp             SC--CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC-CCCCCC
T ss_pred             CC--cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            55  889999999999999999999999999999999888 999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.1e-13  Score=61.33  Aligned_cols=45  Identities=24%  Similarity=0.363  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytr_A            2 SSG--SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSS--CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC-CCSCCC
T ss_pred             CCC--cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.6e-13  Score=61.06  Aligned_cols=44  Identities=20%  Similarity=0.229  Sum_probs=41.1

Q ss_pred             hhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         31 SLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        31 h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      |+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         3 H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytq_A            3 SG--SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP-SGPSSG   46 (46)
T ss_dssp             CS--SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS-SCCCCC
T ss_pred             CC--cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            55  889999999999999999999999999999999888 999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.38  E-value=3.3e-13  Score=60.72  Aligned_cols=42  Identities=21%  Similarity=0.289  Sum_probs=40.0

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSC-CSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            889999999999999999999999999999999888 999876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.38  E-value=8.2e-14  Score=66.74  Aligned_cols=55  Identities=15%  Similarity=0.318  Sum_probs=47.4

Q ss_pred             hhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHH
Q psy12015         28 VDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLT   88 (96)
Q Consensus        28 ~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~   88 (96)
                      |..|+  ++|++++||.|..|++.|.....|.   +.|.++++ |.|..||+.|....++.
T Consensus         2 L~~h~--~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~-~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDE--RDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGT-FRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCS--SSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTE-EBCSSSCCBCEECTTCS
T ss_pred             hhhHH--HHcCCCCCccCCCCCchhccHHHhH---hhcCCCCC-EECCCCCCccccCcccc
Confidence            45677  8999999999999999999887775   78999888 99999999998876653

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.2e-13  Score=60.74  Aligned_cols=44  Identities=20%  Similarity=0.375  Sum_probs=41.1

Q ss_pred             hhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         31 SLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        31 h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      |+  ++|++++||.|..|++.|.....|..|++.|.++++ |.|..|
T Consensus         3 h~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2enc_A            3 SG--SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP-SGPSSG   46 (46)
T ss_dssp             CS--SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSC-CSSCCC
T ss_pred             CC--CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            55  889999999999999999999999999999999888 999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.3e-13  Score=61.24  Aligned_cols=45  Identities=31%  Similarity=0.374  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~H~--~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ysp_A            2 SSG--SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP-SGPSSG   46 (46)
T ss_dssp             CCC--CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCS-SCCSCC
T ss_pred             CCC--cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.5e-13  Score=60.63  Aligned_cols=42  Identities=21%  Similarity=0.296  Sum_probs=40.1

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL-SGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCC-CCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            889999999999999999999999999999999888 999877

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.8e-13  Score=60.93  Aligned_cols=45  Identities=20%  Similarity=0.249  Sum_probs=41.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         2 ~h~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en6_A            2 SSG--SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCS--CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCC-SSSCCC
T ss_pred             CCC--CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCC-CCCCCC
Confidence            355  889999999999999999999999999999999888 999876

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.37  E-value=8.3e-13  Score=69.06  Aligned_cols=59  Identities=20%  Similarity=0.486  Sum_probs=54.3

Q ss_pred             cccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         36 VLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        36 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ...++++|.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~   69 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERP-YTCDICHKAFRRQDHLRDHRYIHS   69 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCC-CBCSSSCCBCSCHHHHHHHGGGSC
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCCCCccchhCCHHHHHHHHHHhC
Confidence            34567899999999999999999999999999888 999999999999999999999875

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.5e-13  Score=60.62  Aligned_cols=45  Identities=22%  Similarity=0.383  Sum_probs=41.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~   46 (46)
T 2ep3_A            2 SSG--SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCC-CCTTCC
T ss_pred             CCC--CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            356  889999999999999999999999999999999888 999864

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=6.6e-13  Score=65.90  Aligned_cols=56  Identities=21%  Similarity=0.322  Sum_probs=52.0

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeC
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQC   74 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C   74 (96)
                      ..+++.|.....|..|+  ++|.+++||.|..|++.|.....|..|+++|.++++ |.|
T Consensus        22 ~~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p-~~C   77 (77)
T 2cot_A           22 DECGKSFSHSSDLSKHR--RTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP-SSG   77 (77)
T ss_dssp             SSSCCBCSCHHHHHHHH--TTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCC-CCC
T ss_pred             CCCCcccCCHHHHHHHH--HHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCC
Confidence            34788999999999999  899999999999999999999999999999999888 887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.4e-13  Score=60.48  Aligned_cols=45  Identities=24%  Similarity=0.319  Sum_probs=41.4

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhh-hhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKK-FECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|++ +|.++++ |.|..|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~-~~C~~C   47 (47)
T 2epx_A            2 SSG--SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP-SGPSSG   47 (47)
T ss_dssp             CCC--CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS-SSCCCC
T ss_pred             ccc--cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCC-CCCCCC
Confidence            355  88999999999999999999999999999 9999888 999876

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.34  E-value=9e-13  Score=65.81  Aligned_cols=53  Identities=25%  Similarity=0.609  Sum_probs=50.1

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ||.|..|++.|.....|..|++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~   53 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRP-YPCQYCGKRFHQKSDMKKHTFIHT   53 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCC-EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCC-eeCCcCChhhCCHHHHHHHHHHhc
Confidence            68999999999999999999999999888 999999999999999999998874

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=7.5e-13  Score=59.54  Aligned_cols=45  Identities=22%  Similarity=0.318  Sum_probs=41.1

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      .|+  ++|++++||.|..|++.|.....|..|++.|.++++ |.|.+|
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~~   46 (46)
T 2em2_A            2 SSG--SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCC--CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCS-SCSSCC
T ss_pred             CCC--CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            355  889999999999999999999999999999999888 999864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.33  E-value=9.9e-13  Score=58.86  Aligned_cols=43  Identities=16%  Similarity=0.202  Sum_probs=40.4

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCP   78 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~   78 (96)
                      ..|++++||.|..|++.|.....|..|+++|.++++ |.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG-KSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCC-CCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCC-CCCcCCC
Confidence            478899999999999999999999999999999888 9999986

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.2e-14  Score=71.30  Aligned_cols=61  Identities=20%  Similarity=0.283  Sum_probs=53.8

Q ss_pred             chhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         25 NSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        25 ~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ...|..|+  ++|.+++||.|..|++.|.....|..       .++ |.|..|++.|.....|..|+++|+
T Consensus         3 ~~~l~~H~--~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~-~~C~~C~~~f~~~~~l~~H~~~H~   63 (73)
T 2ctu_A            3 SGSSGKRQ--KIHLGDRSQKCSKCGIIFIRRSTLSR-------RKT-PMCEKCRKDSCQEAALNKDEGNES   63 (73)
T ss_dssp             CCSCCCCC--CCCCCCSEEECSSSCCEEECCCCCCC-------SSS-CCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred             chhHHHHH--HHhCCCCCeeCCcccchhCCHHHhCc-------CCC-CCCCCCChhhcCHHHHHHHHHhhc
Confidence            45678888  89999999999999999999888765       466 999999999999999999998875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.32  E-value=1.6e-12  Score=65.28  Aligned_cols=53  Identities=28%  Similarity=0.575  Sum_probs=50.0

Q ss_pred             eeec--cccccccccchhHHHHhhhhcCCCCceeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         42 DLKC--DVCEKGYRYKTGLWRHKKFECGQEPKYQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        42 ~~~c--~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      ||.|  ..|++.|.....|..|++.|.+.++ |.|+.  |++.|.....|..|+++|+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~   57 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEKVHA   57 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC-EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC-eeCCCCCCcCccCCHHHHHHHHHHhC
Confidence            6889  8999999999999999999999888 99988  9999999999999999875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=8.1e-13  Score=69.20  Aligned_cols=59  Identities=14%  Similarity=0.152  Sum_probs=52.8

Q ss_pred             ccccccccchhhhhhhccc-cc---cccCeeeccccccccccchhHHHH-hhhhcCCCCceeCCCCC
Q psy12015         17 KLDFGVIRNSSVDKSLNTN-VL---TVHIDLKCDVCEKGYRYKTGLWRH-KKFECGQEPKYQCPHCP   78 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~-~~---~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~~~~~~~~C~~c~   78 (96)
                      .+++.|...+.|..|+  + .|   ++++||.|..|++.|.....|..| +++|.++++ |.|.++.
T Consensus        23 ~Cgk~F~~~~~L~~H~--r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekp-y~C~~~~   86 (102)
T 2ghf_A           23 YCTFQTPDLNMFTFHV--DSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEEN-FKLTMVK   86 (102)
T ss_dssp             SCSCEESCHHHHHHHH--HHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCC-EEEEECC
T ss_pred             CCCCccCCHHHHHHHH--HhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCC-eeCCccc
Confidence            4788999999999999  6 48   668999999999999999999999 899999888 9998644

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.31  E-value=8.5e-13  Score=69.26  Aligned_cols=58  Identities=14%  Similarity=0.209  Sum_probs=52.8

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHh
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r   92 (96)
                      .++  ++|+++++|.|..|++.|.....|..|++.|.  ++ |.|..|++.|.....|..|++
T Consensus         6 s~~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~-~~C~~C~~~f~~~~~l~~H~~   63 (107)
T 1wjp_A            6 SGA--SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NA-AVCPYCSLRFFSPELKQEHES   63 (107)
T ss_dssp             CCC--CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HS-BCCTTTCCCBSSHHHHHHHHH
T ss_pred             ccC--cccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CC-ccCCCCCCccCCHHHHHHHHH
Confidence            445  78899999999999999999999999999984  56 999999999999999999985

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1.2e-12  Score=58.89  Aligned_cols=44  Identities=23%  Similarity=0.326  Sum_probs=40.4

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|++
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em4_A            2 SSG--SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKP-SGPSS   45 (46)
T ss_dssp             CSC--CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSC-CCCCC
T ss_pred             CCc--cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            366  889999999999999999999999999999999888 99974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.31  E-value=1.6e-12  Score=58.99  Aligned_cols=44  Identities=25%  Similarity=0.428  Sum_probs=40.6

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      ..++++++|.|..|++.|.....|..|+++|.++++ |.|.+|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKP-YSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCC-CCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCC-ccCCCCCC
Confidence            356788999999999999999999999999999888 99999985

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.30  E-value=1.4e-12  Score=58.61  Aligned_cols=44  Identities=20%  Similarity=0.338  Sum_probs=40.3

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emj_A            2 SSG--SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCS-SSSCC
T ss_pred             CCC--CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            456  889999999999999999999999999999999888 99974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.30  E-value=2e-12  Score=56.94  Aligned_cols=40  Identities=18%  Similarity=0.297  Sum_probs=37.6

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|+
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESG-PSSG   42 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCS-CCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCC-CCCC
Confidence            789999999999999999999999999999999888 9884

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.8e-12  Score=58.18  Aligned_cols=42  Identities=31%  Similarity=0.540  Sum_probs=39.7

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCC-CSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            789999999999999999999999999999999888 999876

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.3e-13  Score=59.39  Aligned_cols=42  Identities=14%  Similarity=0.125  Sum_probs=39.8

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP-SGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC-CSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            789999999999999999999999999999999888 999876

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2e-12  Score=58.08  Aligned_cols=44  Identities=27%  Similarity=0.375  Sum_probs=40.4

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|++
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2em3_A            2 SSG--SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCC-CCSCC
T ss_pred             CCC--CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.9e-12  Score=58.16  Aligned_cols=44  Identities=23%  Similarity=0.353  Sum_probs=40.3

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+.
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq2_A            2 SSG--SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCC-CCCCC
T ss_pred             Ccc--cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            456  889999999999999999999999999999999888 99874

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.2e-12  Score=57.90  Aligned_cols=44  Identities=23%  Similarity=0.312  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|+++++|.|..|++.|.....|..|+++|.++++ |.|+.
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emi_A            2 SSG--SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCC-CSCCC
T ss_pred             CCC--cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.9e-12  Score=58.09  Aligned_cols=44  Identities=25%  Similarity=0.354  Sum_probs=40.3

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eow_A            2 SSG--SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSC-SCTTC
T ss_pred             Ccc--CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.1e-12  Score=56.86  Aligned_cols=40  Identities=13%  Similarity=0.197  Sum_probs=37.4

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|.
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSG-PSSG   42 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSS-CCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            789999999999999999999999999999999888 9874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.2e-12  Score=57.99  Aligned_cols=44  Identities=23%  Similarity=0.349  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+.
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytp_A            2 SSG--SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCC-CSSCC
T ss_pred             Ccc--cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.4e-12  Score=57.76  Aligned_cols=44  Identities=25%  Similarity=0.359  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p-~~C~~   45 (46)
T 2yts_A            2 SSG--SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCS--CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCS-SCCCC
T ss_pred             CCC--CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCC-cCCCC
Confidence            356  889999999999999999999999999999999888 99874

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.28  E-value=1.5e-12  Score=60.57  Aligned_cols=51  Identities=16%  Similarity=0.164  Sum_probs=43.8

Q ss_pred             ccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCce
Q psy12015         19 DFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKY   72 (96)
Q Consensus        19 ~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   72 (96)
                      .+.|.....+..|+  ++|++++||.|..|++.|.....|..|+++|.++++ |
T Consensus         3 ~k~~~~~~~l~~h~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPR--SRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP-G   53 (54)
T ss_dssp             CCCCSCSSCCCCCH--HHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC-C
T ss_pred             ccccCCCcchhhHH--HhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC-C
Confidence            45677778888888  889999999999999999999999999999988776 5

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.3e-12  Score=57.88  Aligned_cols=44  Identities=18%  Similarity=0.354  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yth_A            2 SSG--SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCC-SSCCC
T ss_pred             Ccc--cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            456  789999999999999999999999999999999888 99874

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.1e-12  Score=58.02  Aligned_cols=44  Identities=25%  Similarity=0.348  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enf_A            2 SSG--SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSC-CCCSC
T ss_pred             CCC--cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99874

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.3e-12  Score=57.88  Aligned_cols=44  Identities=27%  Similarity=0.311  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|++
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2emg_A            2 SSG--SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERP-SGPSS   45 (46)
T ss_dssp             CCC--CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCC-SCSCC
T ss_pred             CCC--CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99974

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.27  E-value=3.1e-12  Score=62.94  Aligned_cols=53  Identities=15%  Similarity=0.359  Sum_probs=49.3

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCC
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEP   70 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   70 (96)
                      ..+++.|.....|..|+  ++|.++++|.|..|++.|.....|..|+++|.++++
T Consensus        21 ~~C~k~f~~~~~l~~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           21 DRCQASFRYKGNLASHK--TVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             TTSSCCBSCHHHHHHHH--HHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCCceeCCHHHHHHHH--HHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            34889999999999999  899999999999999999999999999999999876

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.1e-12  Score=57.94  Aligned_cols=44  Identities=20%  Similarity=0.329  Sum_probs=40.4

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|++
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~~C~~   45 (46)
T 2eor_A            2 SSG--SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CSS--SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCC-SSSTT
T ss_pred             CCC--cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            466  889999999999999999999999999999999888 99974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.4e-12  Score=57.75  Aligned_cols=44  Identities=23%  Similarity=0.368  Sum_probs=40.1

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|....+|..|+++|.++++ |.|++
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytf_A            2 SSG--SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSS-SCCCC
T ss_pred             CCC--CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            355  889999999999999999999999999999999888 99874

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.6e-12  Score=57.66  Aligned_cols=44  Identities=23%  Similarity=0.323  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|....+|..|+++|.++++ |.|++
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ep1_A            2 SSG--SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENP-SGPSS   45 (46)
T ss_dssp             CCC--CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCC-CSSSC
T ss_pred             ccc--cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99874

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.7e-12  Score=57.57  Aligned_cols=44  Identities=23%  Similarity=0.368  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yrj_A            2 SSG--SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCS-SCSCC
T ss_pred             CCc--cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99874

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.8e-12  Score=57.63  Aligned_cols=44  Identities=20%  Similarity=0.328  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+
T Consensus         2 ~h~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2en9_A            2 SSG--SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCC-CSCCC
T ss_pred             CCC--CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            355  889999999999999999999999999999999888 99874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.2e-12  Score=57.90  Aligned_cols=44  Identities=25%  Similarity=0.365  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq1_A            2 SSG--SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCC-SSCCC
T ss_pred             Ccc--cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            466  889999999999999999999999999999999888 99874

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2e-12  Score=57.51  Aligned_cols=43  Identities=26%  Similarity=0.209  Sum_probs=39.3

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eoj_A            2 SSG--SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG-PSSG   44 (44)
T ss_dssp             CSC--CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCS-CCCC
T ss_pred             CCc--cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            356  889999999999999999999999999999999888 9884

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3e-12  Score=57.50  Aligned_cols=44  Identities=25%  Similarity=0.354  Sum_probs=40.1

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+.
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em6_A            2 SSG--SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCC-CCTTC
T ss_pred             CCc--cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            355  789999999999999999999999999999999888 99874

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=3.3e-12  Score=56.81  Aligned_cols=43  Identities=14%  Similarity=0.198  Sum_probs=39.0

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2yu5_A            2 SSG--SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG-PSSG   44 (44)
T ss_dssp             CCS--CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCS-SCCC
T ss_pred             CCc--cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCC-CCCC
Confidence            356  789999999999999999999999999999999888 9874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.5e-12  Score=57.81  Aligned_cols=41  Identities=27%  Similarity=0.451  Sum_probs=38.6

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERP-SGPSS   45 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCS-CTTSC
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCC-CCCCC
Confidence            889999999999999999999999999999999888 99974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.6e-12  Score=57.69  Aligned_cols=44  Identities=18%  Similarity=0.193  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+.
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2eoz_A            2 SSG--SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETL-SGPSS   45 (46)
T ss_dssp             CSC--CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCS-SSCCC
T ss_pred             Ccc--ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99873

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=3e-12  Score=57.50  Aligned_cols=43  Identities=19%  Similarity=0.223  Sum_probs=39.4

Q ss_pred             hhccccccccCeeeccccccccccchhHHHHhhhhcC-CCCceeCCC
Q psy12015         31 SLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECG-QEPKYQCPH   76 (96)
Q Consensus        31 h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~-~~~~~~C~~   76 (96)
                      |+  ++|++++||.|..|++.|.....|..|+++|.+ +++ |.|++
T Consensus         3 H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~~C~~   46 (46)
T 2eoy_A            3 SG--SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKS-GPSSG   46 (46)
T ss_dssp             CC--CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTT-SSSCC
T ss_pred             Cc--cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            55  889999999999999999999999999999999 888 99863

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.9e-12  Score=56.92  Aligned_cols=43  Identities=21%  Similarity=0.312  Sum_probs=39.1

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      .|+  ++|++++||.|..|++.|....+|..|+++|.++++ |.|+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eof_A            2 SSG--SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG-PSSG   44 (44)
T ss_dssp             CCS--SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSC-SCCC
T ss_pred             CCc--cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCC-CCCC
Confidence            356  789999999999999999999999999999999888 9884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2.8e-12  Score=57.04  Aligned_cols=43  Identities=14%  Similarity=0.239  Sum_probs=39.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2emb_A            2 SSG--SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSG-PSSG   44 (44)
T ss_dssp             CCC--SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCC-TTCC
T ss_pred             Ccc--cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCCC
Confidence            456  889999999999999999999999999999999888 9874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.2e-12  Score=57.91  Aligned_cols=44  Identities=25%  Similarity=0.341  Sum_probs=40.1

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yti_A            2 SSG--SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCC--CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCC-SSTTC
T ss_pred             CCC--cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCC-CCCCC
Confidence            355  889999999999999999999999999999999888 99874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=4.7e-12  Score=63.73  Aligned_cols=62  Identities=15%  Similarity=0.201  Sum_probs=54.7

Q ss_pred             ccccccccchhhhhhhcccccccc----CeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCC
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVH----IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRS   81 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~----~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f   81 (96)
                      .+++.|.....|..|+  ..+.++    ++|.|..|++.|.....|..|++.|.+.++ +.|..|+..+
T Consensus        20 ~C~~~f~~~~~l~~H~--~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~~~~~~~~~~   85 (86)
T 1x6h_A           20 HCDKTFRQKQLLDMHF--KRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG-VEGENSGPSS   85 (86)
T ss_dssp             SSSCEESSHHHHHHHH--HHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS-CCCCCCCCCC
T ss_pred             CCCCccCCHHHHHHHH--HHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC-cccCCCCCCC
Confidence            3788999999999998  555544    789999999999999999999999999888 9999998764

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.7e-12  Score=56.45  Aligned_cols=39  Identities=23%  Similarity=0.383  Sum_probs=36.7

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQC   74 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C   74 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2ytb_A            4 GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP-SSG   42 (42)
T ss_dssp             CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC-CCC
T ss_pred             cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            789999999999999999999999999999999888 876

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.7e-12  Score=57.02  Aligned_cols=43  Identities=23%  Similarity=0.237  Sum_probs=39.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2en7_A            2 SSG--SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG-PSSG   44 (44)
T ss_dssp             CSC--CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS-SCCC
T ss_pred             CCC--cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCC-CCCC
Confidence            356  889999999999999999999999999999999888 9884

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.7e-12  Score=56.83  Aligned_cols=41  Identities=24%  Similarity=0.465  Sum_probs=38.5

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|..
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC-CCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            789999999999999999999999999999999888 99863

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3e-12  Score=56.36  Aligned_cols=39  Identities=18%  Similarity=0.266  Sum_probs=36.8

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQC   74 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C   74 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP-SSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCS-SCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCC-CCC
Confidence            789999999999999999999999999999999888 876

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.5e-12  Score=57.28  Aligned_cols=43  Identities=19%  Similarity=0.220  Sum_probs=39.5

Q ss_pred             hhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         31 SLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        31 h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      |+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|..
T Consensus         3 H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eoh_A            3 SG--SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERS-SGPSS   45 (46)
T ss_dssp             CC--CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCS-CSTTC
T ss_pred             CC--CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            55  889999999999999999999999999999999888 99863

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.24  E-value=4.8e-12  Score=55.65  Aligned_cols=39  Identities=15%  Similarity=0.213  Sum_probs=36.7

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQC   74 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C   74 (96)
                      ++|++++||.|..|++.|....+|..|+++|.++++ |.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~-~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP-SSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCC-CCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCC-CCC
Confidence            789999999999999999999999999999999888 887

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.6e-12  Score=57.71  Aligned_cols=44  Identities=18%  Similarity=0.278  Sum_probs=40.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+.
T Consensus         2 ~h~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emz_A            2 SSG--SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKS-SGPSS   45 (46)
T ss_dssp             CCC--SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTC-CCSCC
T ss_pred             CCC--cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.2e-12  Score=56.86  Aligned_cols=43  Identities=21%  Similarity=0.212  Sum_probs=39.2

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|.
T Consensus         2 ~H~--~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eox_A            2 SSG--SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG-PSSG   44 (44)
T ss_dssp             CCC--CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCC-CSCC
T ss_pred             CCC--cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            356  889999999999999999999999999999999888 9874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.2e-12  Score=57.43  Aligned_cols=43  Identities=26%  Similarity=0.313  Sum_probs=39.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yto_A            2 SSG--SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH-SGPS   44 (46)
T ss_dssp             CCC--CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCB-TTTB
T ss_pred             Ccc--cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCC-CCCC
Confidence            456  889999999999999999999999999999999888 9986

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3e-12  Score=57.47  Aligned_cols=43  Identities=16%  Similarity=0.294  Sum_probs=39.6

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2en3_A            2 SSG--SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP-SGPS   44 (46)
T ss_dssp             CCC--CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCC-SSCS
T ss_pred             ccc--cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            466  889999999999999999999999999999999888 9986

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.9e-12  Score=56.00  Aligned_cols=39  Identities=18%  Similarity=0.336  Sum_probs=36.4

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQC   74 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C   74 (96)
                      ++|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP-SSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS-TTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCC-CCC
Confidence            789999999999999999999999999999999887 876

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.6e-12  Score=56.52  Aligned_cols=44  Identities=20%  Similarity=0.348  Sum_probs=40.1

Q ss_pred             hhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         30 KSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        30 ~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      .|+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|+.
T Consensus         2 ~H~--~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq3_A            2 SSG--SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKP-SGPSS   45 (46)
T ss_dssp             CCC--CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCC-CCSCC
T ss_pred             Ccc--cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            356  889999999999999999999999999999999888 99863

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=7.6e-12  Score=55.63  Aligned_cols=40  Identities=18%  Similarity=0.294  Sum_probs=37.5

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|+
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESG-PSSG   44 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC-CCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCC-CCCC
Confidence            789999999999999999999999999999999888 9884

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=9.3e-12  Score=56.23  Aligned_cols=42  Identities=19%  Similarity=0.250  Sum_probs=39.5

Q ss_pred             ccccccCeeecc--ccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015         35 NVLTVHIDLKCD--VCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus        35 ~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      ++|++++||.|.  .|++.|.....|..|+++|.++++ |.|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS-CSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            789999999998  899999999999999999999888 999876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=3.7e-12  Score=63.17  Aligned_cols=64  Identities=19%  Similarity=0.214  Sum_probs=56.4

Q ss_pred             hhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         26 SSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        26 ~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..|..|+  .++.+++|+.|..|+..|. ..+|..|+ .+.+.++ +.|+.|++.|. ...|..|.+++.
T Consensus         3 ~~L~~H~--~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~-~~C~~C~~~~~-~~~l~~H~~~c~   66 (75)
T 2d9k_A            3 SGSSGHE--ETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGART-ELCGNCGRNVL-VKDLKTHPEVCG   66 (75)
T ss_dssp             CCCSCCC--CCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCE-EECSSSCCEEE-TTGGGTHHHHBT
T ss_pred             hHHHhhC--cccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCc-eEcccCCCcCc-HHHHHHHHHHcc
Confidence            4677888  8899999999999999995 88899999 8899888 99999999877 588999998764

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.20  E-value=1.1e-11  Score=54.84  Aligned_cols=41  Identities=12%  Similarity=0.152  Sum_probs=37.9

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKS-GPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTC-SSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCC-ccCCC
Confidence            578899999999999999999999999999999888 99863

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.1e-11  Score=55.65  Aligned_cols=41  Identities=15%  Similarity=0.299  Sum_probs=38.4

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|.+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCC-SSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCC-CCCCC
Confidence            788999999999999999999999999999999888 99864

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.3e-11  Score=54.88  Aligned_cols=41  Identities=20%  Similarity=0.272  Sum_probs=37.7

Q ss_pred             hhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeC
Q psy12015         31 SLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQC   74 (96)
Q Consensus        31 h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C   74 (96)
                      |+  ++|++++||.|..|++.|.....|..|+++|.++++ |.|
T Consensus         3 H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~~   43 (44)
T 2epv_A            3 SG--SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG-PSS   43 (44)
T ss_dssp             CC--CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC-CCC
T ss_pred             CC--cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC-CCC
Confidence            55  889999999999999999999999999999999888 876

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1e-11  Score=55.46  Aligned_cols=41  Identities=22%  Similarity=0.386  Sum_probs=38.1

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPH   76 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~   76 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKS-GPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCC-CCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCC-CCCCC
Confidence            688999999999999999999999999999999888 99863

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.6e-11  Score=53.67  Aligned_cols=39  Identities=23%  Similarity=0.388  Sum_probs=36.2

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQC   74 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C   74 (96)
                      ++|++++||.|..|++.|.....|..|+++|.++++ |.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP-SSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSC-SCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCC-cCC
Confidence            578899999999999999999999999999999888 876

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.16  E-value=2.6e-11  Score=56.57  Aligned_cols=52  Identities=17%  Similarity=0.259  Sum_probs=47.6

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCC
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQE   69 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   69 (96)
                      ..+++.|.....|..|+  ++|.+++||.|..|++.|.....|..|+++|.+++
T Consensus         5 ~~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            5 EECGIRXKKPSMLKKHI--RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             TTTCCBCSSHHHHHHHH--HHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCCcCcCCCHHHHHHHH--HhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            44788999999999999  88999999999999999999999999999988754

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.16  E-value=1.6e-11  Score=62.94  Aligned_cols=52  Identities=19%  Similarity=0.358  Sum_probs=31.1

Q ss_pred             eeccccccccccchhHHHHhhh-hcCCCCc-------eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKF-ECGQEPK-------YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~-~~~~~~~-------~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      +.|..|++.|.....|..|++. |.+.++.       |.|..|++.|.....|.+|+++|
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhc
Confidence            5566666666666666666665 5543221       55666666666666666666655

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=3.9e-11  Score=58.35  Aligned_cols=52  Identities=13%  Similarity=0.237  Sum_probs=48.5

Q ss_pred             ccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCC
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEP   70 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   70 (96)
                      .+++.|.....|..|+  ++|.++++|.|..|++.|.....|..|++.|.++++
T Consensus        14 ~C~k~f~~~~~L~~H~--~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A           14 ECSYSCSSKAALRIHE--RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SSSCEESSHHHHHHHH--GGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCcccCCHHHHHHHH--HHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            3788999999999999  889999999999999999999999999999999776

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.13  E-value=5.2e-11  Score=60.19  Aligned_cols=55  Identities=27%  Similarity=0.543  Sum_probs=50.5

Q ss_pred             cCeeeccc--cccccccchhHHHHhhhhcCCCCceeCC--CCCCCCCCchhHHHHHhhcC
Q psy12015         40 HIDLKCDV--CEKGYRYKTGLWRHKKFECGQEPKYQCP--HCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        40 ~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~~C~--~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..+|.|..  |++.|.....|..|++.|.+.++ |.|+  .|++.|.....|..|+++|+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~   61 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP-YHCDWDGCGWKFARSDELTRHYRKHT   61 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCC-EECCSTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC-cCCCCCCCCCccCCHHHHHHHHHHcC
Confidence            45799999  99999999999999999999888 9997  69999999999999998874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.13  E-value=3.4e-11  Score=61.03  Aligned_cols=50  Identities=18%  Similarity=0.293  Sum_probs=45.4

Q ss_pred             ccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHh-hhhcCC
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHK-KFECGQ   68 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~-~~~~~~   68 (96)
                      .+++.|.....|..|+  ++|++++||.|..|++.|.....|..|+ +.|.++
T Consensus        33 ~Cgk~F~~~~~L~~H~--~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           33 VCGESFASKGAQERHL--RLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             TSCCEESSHHHHHHHH--HTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCcCcHHHHhhhh--hhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3889999999999999  8999999999999999999999999997 457654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=2.3e-11  Score=59.49  Aligned_cols=51  Identities=22%  Similarity=0.304  Sum_probs=47.1

Q ss_pred             ccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCC
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQE   69 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   69 (96)
                      .+++.|.....|..|+  ++|.+++||.|..|++.|.....|..|+++|.++.
T Consensus        19 ~C~k~f~~~~~L~~H~--~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           19 ECGKAFSRSSILVQHQ--RVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             SSCCEESSHHHHHHHH--HGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCccCCHHHHHHHH--HhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3788999999999999  89999999999999999999999999999998853

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.10  E-value=3.3e-11  Score=55.85  Aligned_cols=46  Identities=20%  Similarity=0.424  Sum_probs=41.7

Q ss_pred             ccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         49 EKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        49 ~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++.|.....+..|++.|.++++ |.|..|++.|.....|..|+++|+
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   48 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQP-ATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCC-EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcchhhHHHhcCCCCC-ccCCCCCcccCCHHHHHHHHHHhc
Confidence            4567788889999999999888 999999999999999999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.09  E-value=1.8e-10  Score=59.32  Aligned_cols=57  Identities=28%  Similarity=0.489  Sum_probs=51.6

Q ss_pred             cccCeeeccc--cccccccchhHHHHhhhhcCCCCceeCC--CCCCCCCCchhHHHHHhhcC
Q psy12015         38 TVHIDLKCDV--CEKGYRYKTGLWRHKKFECGQEPKYQCP--HCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        38 ~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~~C~--~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..+++|.|..  |++.|.....|..|++.|.+.++ |.|.  .|++.|.....|..|+++|+
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~   71 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP-YKCTWEGCDWRFARSDELTRHYRKHT   71 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCC-EECCSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCC-eeCCCCCCCCccCCHHHHHHHHHHhC
Confidence            3466899996  99999999999999999999888 9996  69999999999999999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.08  E-value=9e-11  Score=60.07  Aligned_cols=57  Identities=12%  Similarity=0.110  Sum_probs=52.0

Q ss_pred             cccccccccchhhhhhhcccc-ccccCe--------eeccccccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNV-LTVHID--------LKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~-~~~~~~--------~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      ..+++.|.....|..|+  +. |.++++        |.|..|++.|.....|..|+++|.++++ |.|.
T Consensus        29 ~~C~k~f~~~~~L~~H~--~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   94 (95)
T 2ej4_A           29 KSCDRTFSTMHELVTHV--TMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS-GPSS   94 (95)
T ss_dssp             CCCCCCCSSHHHHHHHH--HHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC-CSSC
T ss_pred             cccccccCCHHHHHHHH--HHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCC
Confidence            35789999999999999  76 888887        8999999999999999999999999888 9986

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.07  E-value=7.7e-11  Score=54.93  Aligned_cols=51  Identities=22%  Similarity=0.128  Sum_probs=45.5

Q ss_pred             ccccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcC
Q psy12015         15 NTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        15 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ...+++.|.....|..|+  ++|++++||.|..|++.|.....|..|++.+.+
T Consensus         7 C~~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            7 CSYCGKFFRSNYYLNIHL--RTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             CTTTCCBCSCHHHHHHHH--HHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCcchhCChHHHHHHH--HHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            344788999999999999  899999999999999999999999999988753

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=1.6e-10  Score=55.38  Aligned_cols=58  Identities=14%  Similarity=-0.010  Sum_probs=48.4

Q ss_pred             EEeecCcccc--cccccccchhhhhhhcccc-c-cccCeeeccccccccccchhHHHHhhhhcC
Q psy12015          8 MFVRKGTNTK--LDFGVIRNSSVDKSLNTNV-L-TVHIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus         8 ~~~~~~~~~~--~~~~~~~~~~~~~h~~~~~-~-~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      .+.++.+..+  +++.|.....|..|+  +. | .+++||.|..|++.|.....|..|++.+.+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~--~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHY--VTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHH--HHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHH--HHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3455554444  889999999999999  66 7 689999999999999999999999998765

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.02  E-value=7.9e-11  Score=57.58  Aligned_cols=47  Identities=15%  Similarity=0.332  Sum_probs=44.0

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhc
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      +++.|.....|..|+  ++|.++++|.|..|++.|.....|..|+++|+
T Consensus        27 C~k~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           27 CDRRFSRSDELTRHI--RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             BCCEESSHHHHHHHH--HHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCccCCHHHHHHHH--HhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            789999999999999  89999999999999999999999999998763

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.2e-10  Score=60.19  Aligned_cols=56  Identities=23%  Similarity=0.344  Sum_probs=50.2

Q ss_pred             cccccccc-cchhhhhhhccccccc-cCeeeccccccccccchhHHHHhhhhcCCCCceeC
Q psy12015         16 TKLDFGVI-RNSSVDKSLNTNVLTV-HIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQC   74 (96)
Q Consensus        16 ~~~~~~~~-~~~~~~~h~~~~~~~~-~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C   74 (96)
                      ..+++.|. ....|..|+  ++|.+ +++|.|..|++.|.....|..|++.|.++++ ...
T Consensus        28 ~~C~k~f~~~~~~L~~H~--~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp-~~~   85 (98)
T 2gqj_A           28 PTCNVVTRKTLVGLKKHM--EVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP-SDA   85 (98)
T ss_dssp             TTTCCCCSSCSHHHHHHH--HHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS-SCC
T ss_pred             CCCCCChhhhHHHHHHHH--HHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC-CCC
Confidence            34888999 999999999  88998 9999999999999999999999999999877 443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.3e-10  Score=48.72  Aligned_cols=36  Identities=19%  Similarity=0.242  Sum_probs=30.0

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEP   70 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   70 (96)
                      ++|++++||.|..|++.|.....|..|+++|.+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            578888889999999999888888888888887653

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.99  E-value=2.4e-10  Score=59.06  Aligned_cols=51  Identities=16%  Similarity=0.136  Sum_probs=46.0

Q ss_pred             ccccccc-ccchhhhhhhccccccccCeeeccccccccccchhHHHH-hhhhcCCCC
Q psy12015         16 TKLDFGV-IRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRH-KKFECGQEP   70 (96)
Q Consensus        16 ~~~~~~~-~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~~~~~   70 (96)
                      ..+++.| .....|..|+  ++| +++||.|..|++.|.....|..| +++|.+ ++
T Consensus        38 ~~C~k~F~~~~~~L~~H~--~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~-~p   90 (96)
T 2ctd_A           38 PTCQAVGRKTIEGLKKHM--ENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS-LP   90 (96)
T ss_dssp             TTTCSCEESSHHHHHHHH--HHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC-CS
T ss_pred             CCCCCCcccCHHHHHHHH--HHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC-CC
Confidence            3478999 8999999999  889 99999999999999999999999 888876 45

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.99  E-value=3.4e-10  Score=53.23  Aligned_cols=52  Identities=17%  Similarity=0.330  Sum_probs=45.9

Q ss_pred             ccccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHh-hhhcCC
Q psy12015         15 NTKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHK-KFECGQ   68 (96)
Q Consensus        15 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~-~~~~~~   68 (96)
                      ...+++.|.....|..|+  ++|.+++||.|..|++.|.....|..|+ +.|.++
T Consensus         5 C~~C~~~f~~~~~l~~H~--~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            5 CEVCTRAFARQEHLKRHY--RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CTTTCCCBSCHHHHHHHH--HTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CCCCccccCCHHHHHHHH--HHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            345788999999999999  8899999999999999999999999996 567663

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.98  E-value=2.5e-10  Score=49.24  Aligned_cols=37  Identities=14%  Similarity=0.216  Sum_probs=32.4

Q ss_pred             ccccCeeeccccccccccchhHHHHhhhhcCCCCceeC
Q psy12015         37 LTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQC   74 (96)
Q Consensus        37 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C   74 (96)
                      |++++||.|..|++.|.....|..|+++|.++++ |.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRA-RLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCT-TTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcc-cee
Confidence            4678899999999999999999999999999887 765

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.94  E-value=5.5e-10  Score=47.49  Aligned_cols=33  Identities=18%  Similarity=0.220  Sum_probs=20.3

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ++|++++||.|..|++.|.....|..|++.|.+
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            556666666666666666666666666665544

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.92  E-value=1.1e-09  Score=45.93  Aligned_cols=33  Identities=18%  Similarity=0.291  Sum_probs=25.1

Q ss_pred             ccccCeeeccccccccccchhHHHHhhhhcCCC
Q psy12015         37 LTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQE   69 (96)
Q Consensus        37 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   69 (96)
                      |++++||.|..|++.|.....|..|++.|.+.+
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            567778888888888888888888877777654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.91  E-value=1.1e-09  Score=45.88  Aligned_cols=33  Identities=18%  Similarity=0.245  Sum_probs=23.7

Q ss_pred             ccccCeeeccccccccccchhHHHHhhhhcCCC
Q psy12015         37 LTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQE   69 (96)
Q Consensus        37 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   69 (96)
                      |++++||.|..|++.|.....|..|++.|.+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            566777777777777777777777777776654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.90  E-value=7.6e-10  Score=47.02  Aligned_cols=34  Identities=26%  Similarity=0.558  Sum_probs=31.0

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.++++ |.|+.|++.|.....|..|+++|+
T Consensus         2 H~~~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            2 STRGSTGIKP-FQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSS-BCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCcCCCCCC-ccCCCCCcccCcHHHHHHHHHHhc
Confidence            5678889888 999999999999999999999875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=9e-10  Score=53.45  Aligned_cols=41  Identities=12%  Similarity=0.159  Sum_probs=35.9

Q ss_pred             ccccccCeeeccc--cccccccchhHHHHh-hhhcCCCCceeCCC
Q psy12015         35 NVLTVHIDLKCDV--CEKGYRYKTGLWRHK-KFECGQEPKYQCPH   76 (96)
Q Consensus        35 ~~~~~~~~~~c~~--c~~~f~~~~~l~~h~-~~~~~~~~~~~C~~   76 (96)
                      ..+++++||.|..  |++.|....+|..|+ ++|++++| +-|..
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP-~~~~~   63 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP-AFSAE   63 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC-CCCCS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC-ccccc
Confidence            4578999999975  999999999999997 68999998 87754

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1e-09  Score=52.69  Aligned_cols=50  Identities=14%  Similarity=0.185  Sum_probs=44.5

Q ss_pred             ccccccccchhhhhhhccccccccCeeecc-ccccccccchhHHHHhhhhcCCCC
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCD-VCEKGYRYKTGLWRHKKFECGQEP   70 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~-~c~~~f~~~~~l~~h~~~~~~~~~   70 (96)
                      .+++.|. .+.|..|+  ++ ++++||.|. .|++.|.....|..|+++|...++
T Consensus        15 ~C~k~f~-~~~L~~H~--~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           15 YCTKEFV-FDTIQSHQ--YQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             SSCCEEE-HHHHHHHH--HH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             ccCCccC-HHHHHHHH--HH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3778899 99999999  67 999999999 999999999999999998877544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=3.1e-10  Score=57.83  Aligned_cols=44  Identities=9%  Similarity=0.125  Sum_probs=40.0

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      .+|++++||.|..|++.|.....|..|+++|.++++ |.|..|.+
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~~~~   61 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ-KRAKRQER   61 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHH-HHCCCCSC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC-cccchhhh
Confidence            678999999999999999999999999999999888 99987654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=7.2e-11  Score=57.52  Aligned_cols=60  Identities=15%  Similarity=0.223  Sum_probs=47.3

Q ss_pred             EEeecCcccc--cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCC
Q psy12015          8 MFVRKGTNTK--LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHC   77 (96)
Q Consensus         8 ~~~~~~~~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c   77 (96)
                      ++.++.+..+  +++.|.....|..         +++|.|..|++.|.....|..|+++|.++++ |.|+.|
T Consensus        12 ~h~~~~~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~-~~C~~C   73 (73)
T 2ctu_A           12 IHLGDRSQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNESGKKT-SGPSSG   73 (73)
T ss_dssp             CCCCCSEEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC-SSCCCC
T ss_pred             HhCCCCCeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC-CCCCCC
Confidence            3444444333  6677777665544         6799999999999999999999999999888 999877

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.1e-09  Score=45.76  Aligned_cols=33  Identities=18%  Similarity=0.110  Sum_probs=25.9

Q ss_pred             ccccccCeeeccccccccccchhHHHH-hhhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRH-KKFECG   67 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h-~~~~~~   67 (96)
                      ++|++++||.|..|++.|.....|..| ++.|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            567778888888888888888888888 777765

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.84  E-value=1.3e-09  Score=47.57  Aligned_cols=34  Identities=24%  Similarity=0.526  Sum_probs=30.5

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         1 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   34 (42)
T 2el5_A            1 GSSGSSGENP-YECSECGKAFNRKDQLISHQRTHA   34 (42)
T ss_dssp             CCSSSSSCCS-EECSSSCCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCCCC-ccCCCcChhhCCHHHHHHHHHhcC
Confidence            4567888888 999999999999999999999875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.4e-09  Score=47.49  Aligned_cols=34  Identities=21%  Similarity=0.515  Sum_probs=30.4

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         1 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   34 (42)
T 2yte_A            1 GSSGSSGEKP-YSCAECKETFSDNNRLVQHQKMHT   34 (42)
T ss_dssp             CCSSSCSCCS-CBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             CCcCcCCCCC-eECCCCCCccCCHHHHHHHHHHhC
Confidence            4567888888 999999999999999999999875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2e-09  Score=53.17  Aligned_cols=52  Identities=12%  Similarity=0.181  Sum_probs=45.3

Q ss_pred             ccccccccchhhhhhhccccccc---cCeeeccccccccccchhHHHHhh-hhcCCCC
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTV---HIDLKCDVCEKGYRYKTGLWRHKK-FECGQEP   70 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~---~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~   70 (96)
                      .+++.|.....|..|+  ++|.+   +++|.|..|++.|.....|..|++ .|.+..+
T Consensus        12 ~C~k~f~~~~~L~~H~--~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A           12 ICGFTCRQKASLNWHQ--RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             SSCCEESSHHHHHHHH--HHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCeeCCHHHHHHHH--HHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            4789999999999999  88886   889999999999999999999995 4655544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.3e-09  Score=48.22  Aligned_cols=35  Identities=23%  Similarity=0.433  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (44)
T 2epv_A            2 SSGSSGSGEKP-YECNECGKAFIWKSLLIVHERTHA   36 (44)
T ss_dssp             CCCCCCCCCCS-EECSSSCCEESSHHHHHHHHGGGS
T ss_pred             CCCcccCCCcC-eECCCCCcccCchHHHHHHHhHhc
Confidence            46778899888 999999999999999999999875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.83  E-value=1.9e-09  Score=53.12  Aligned_cols=60  Identities=10%  Similarity=0.092  Sum_probs=48.3

Q ss_pred             EEeecCccc--ccccccccchhhhhhhccc-ccccc-CeeeccccccccccchhHHHHhhhhcCCC
Q psy12015          8 MFVRKGTNT--KLDFGVIRNSSVDKSLNTN-VLTVH-IDLKCDVCEKGYRYKTGLWRHKKFECGQE   69 (96)
Q Consensus         8 ~~~~~~~~~--~~~~~~~~~~~~~~h~~~~-~~~~~-~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   69 (96)
                      ++.++.+..  .+++.|.....|..|+  . .|.++ ++|.|..|++.|.....|..|++.+.+..
T Consensus         9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~--~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            9 THSGEKPYECYICHARFTQSGTMKMHI--LQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHH--HHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             ccCCCCCeECCCcCchhCCHHHHHHHH--HHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            344444443  3889999999999998  5 67765 89999999999999999999999866544

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.4e-10  Score=48.04  Aligned_cols=34  Identities=24%  Similarity=0.581  Sum_probs=31.0

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   35 (42)
T 2ytb_A            2 SSGSSGGEKP-YRCDQCGKAFSQKGSLIVHIRVHT   35 (42)
T ss_dssp             CCCCCCSCCS-BCCTTTTCCBSSHHHHHTTGGGTS
T ss_pred             CccccCCCCC-eeCCCccchhCCHHHHHHHHHHhC
Confidence            6678889888 999999999999999999999875

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.5e-09  Score=47.88  Aligned_cols=35  Identities=17%  Similarity=0.440  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2yu5_A            2 SSGSSGAGENP-FKCSKCDRVFTQRNYLVQHERTHA   36 (44)
T ss_dssp             CCSCCCSCCCS-EECSSSSCEESSSHHHHHHHHHCC
T ss_pred             CCccccCCCCC-eECCCCCchhCCHHHHHHHhHhcC
Confidence            46778889888 999999999999999999999875

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.5e-09  Score=48.39  Aligned_cols=35  Identities=26%  Similarity=0.580  Sum_probs=31.8

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eml_A            2 SSGSSGTGEKP-YECSVCGKAFSHRQSLSVHQRIHS   36 (46)
T ss_dssp             CCCCCCSSCCS-EECSSSCCEESSHHHHHHHHGGGS
T ss_pred             CccCCcCCCCC-eeCCCcCCccCCHHHHHHHHHHhc
Confidence            46778899888 999999999999999999999875

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.7e-09  Score=48.14  Aligned_cols=35  Identities=23%  Similarity=0.497  Sum_probs=31.8

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytj_A            2 SSGSSGTGEKP-YICAECGKAFTIRSNLIKHQKIHT   36 (46)
T ss_dssp             CSSCTTSSCCS-EECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CcccCCCCCcC-eECCCCChhhCCHHHHHHHHHHcC
Confidence            46778999888 999999999999999999999875

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=3.7e-09  Score=44.84  Aligned_cols=34  Identities=21%  Similarity=0.245  Sum_probs=25.2

Q ss_pred             ccccccCeeeccccccccccc-hhHHHHhhhhcCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYK-TGLWRHKKFECGQ   68 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~-~~l~~h~~~~~~~   68 (96)
                      ++|++++||.|..|++.|... ..|..|+++|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            456777777888888877777 7777777777664

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.4e-09  Score=48.43  Aligned_cols=35  Identities=26%  Similarity=0.562  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep3_A            2 SSGSSGTGEKP-YRCAECGKAFTDRSNLFTHQKIHT   36 (46)
T ss_dssp             CCCSSSSCCCS-EECSSSCCEESSHHHHHHHHTTTT
T ss_pred             CCCCCCCCCCC-eECCCCCchhCCHHHHHHHHHHcC
Confidence            46778999888 999999999999999999999875

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.4e-09  Score=48.44  Aligned_cols=35  Identities=23%  Similarity=0.446  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2ytp_A            2 SSGSSGTGERH-YECSECGKAFARKSTLIMHQRIHT   36 (46)
T ss_dssp             CCCCSSCCCCC-EECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CcccCcCCCCC-eECCcCCcccCCHHHHHHHHHHhC
Confidence            46778899888 999999999999999999999875

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.80  E-value=1.8e-09  Score=48.12  Aligned_cols=35  Identities=14%  Similarity=0.339  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2em0_A            2 SSGSSGMGEKT-WKCRECDMCFSQASSLRLHQNVHV   36 (46)
T ss_dssp             CCCCCSCCCCC-CCCSSSCCCCSSHHHHHHHGGGGS
T ss_pred             CCcCccCCCcC-eECCCCCcccCCHHHHHHHHHHcC
Confidence            46778899888 999999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=4.1e-09  Score=45.47  Aligned_cols=31  Identities=29%  Similarity=0.304  Sum_probs=20.5

Q ss_pred             ccccCeeeccc--cccccccchhHHHHhhhhcC
Q psy12015         37 LTVHIDLKCDV--CEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        37 ~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~   67 (96)
                      +++++||.|..  |++.|.....|..|+++|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            45666677764  77777766667777666665

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.2e-09  Score=47.79  Aligned_cols=35  Identities=23%  Similarity=0.464  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emi_A            2 SSGSSGTGERH-YECSECGKAFIQKSTLSMHQRIHR   36 (46)
T ss_dssp             CCCCSCSSCCC-EECSSSCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccCCCCC-CCCCCCCcccCCHHHHHHHHhHhC
Confidence            46778889888 999999999999999999999875

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.1e-09  Score=47.83  Aligned_cols=35  Identities=20%  Similarity=0.371  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2epw_A            2 SSGSSGTGEKP-CKCTECGKAFCWKSQLIMHQRTHV   36 (46)
T ss_dssp             CCCCCCCCCCS-EECSSSCCEESSSHHHHHHHHHCC
T ss_pred             cCcccCCCCCC-eeCCCCCCccCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.9e-09  Score=48.02  Aligned_cols=35  Identities=26%  Similarity=0.573  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2ytn_A            2 SSGSSGTGKKP-YKCNECGKVFTQNSHLARHRGIHT   36 (46)
T ss_dssp             CCCCCCSCCSS-CBCTTTCCBCSSHHHHHHHGGGTS
T ss_pred             CCCcCCCCCcC-eECCCCCCeeCCHHHHHHHhhhcC
Confidence            46778889888 999999999999999999999875

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.9e-09  Score=47.48  Aligned_cols=35  Identities=23%  Similarity=0.516  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eof_A            2 SSGSSGTGEKP-YECNECQKAFNTKSNLMVHQRTHT   36 (44)
T ss_dssp             CCSSCCSCCCS-EECTTTCCEESCHHHHHHHHHHTT
T ss_pred             CCccCCCCCCC-eECCCCCcccCCHhHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.1e-09  Score=47.90  Aligned_cols=35  Identities=20%  Similarity=0.426  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emf_A            2 SSGSSGTGGKH-FECTECGKAFTRKSTLSMHQKIHT   36 (46)
T ss_dssp             CCCSSSSSSCC-EECSSSCCEESCHHHHHHHGGGTS
T ss_pred             ccccccCCCCC-eECCCCCchhCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.7e-09  Score=48.16  Aligned_cols=35  Identities=26%  Similarity=0.569  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2enf_A            2 SSGSSGTGEKP-YKCNECGKVFTQNSHLVRHRGIHT   36 (46)
T ss_dssp             CCCCCCCCCCS-CBCSSSCCBCSSHHHHHHHHTTTT
T ss_pred             CCCcCCCCCcC-eECCCCCcccCCHHHHHHHHHhhC
Confidence            46778889888 999999999999999999999875

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.79  E-value=2.5e-09  Score=47.64  Aligned_cols=35  Identities=17%  Similarity=0.483  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ely_A            2 SSGSSGTGEKP-FKCVECGKGFSRRSALNVHHKLHT   36 (46)
T ss_dssp             CCCCCCCCCCS-BCCSSSCCCBSSTTHHHHHHHHHS
T ss_pred             CCCCCCCCCCC-cccCccCcccCCHHHHHHHHHHcC
Confidence            46778899888 999999999999999999999875

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.4e-09  Score=47.61  Aligned_cols=35  Identities=26%  Similarity=0.445  Sum_probs=31.8

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|+.|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eme_A            2 SSGSSGSGEKP-YVCDYCGKAFGLSAELVRHQRIHT   36 (46)
T ss_dssp             CCCCTTCCCCS-EECSSSCCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCCCCC-eECCCCChhhCCHHHHHHHHHhcC
Confidence            46778999888 999999999999999999999875

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.2e-09  Score=47.83  Aligned_cols=35  Identities=23%  Similarity=0.538  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoh_A            2 SSGSSGSGKKP-YECKECRKTFIQIGHLNQHKRVHT   36 (46)
T ss_dssp             CCCCSCCCSCS-CCCSSSCCCCSSHHHHHHHHHHCS
T ss_pred             CCCCCcCCCCC-cCCCCcCchhCCHHHHHHHHHHhC
Confidence            36778888888 999999999999999999999875

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.8e-09  Score=48.09  Aligned_cols=35  Identities=17%  Similarity=0.360  Sum_probs=31.8

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq4_A            2 SSGSSGTGEKL-YNCKECGKSFSRAPCLLKHERLHS   36 (46)
T ss_dssp             CCCCCSSCCCC-CCBTTTTBCCSCHHHHHHHHHHCC
T ss_pred             CCcccCCCCCC-eECCCCCCccCchHHHHHHHHhcC
Confidence            46778899888 999999999999999999999875

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=47.94  Aligned_cols=35  Identities=20%  Similarity=0.428  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eop_A            2 SSGSSGTGEKP-HECRECGKSFSFNSQLIVHQRIHT   36 (46)
T ss_dssp             CCCCSCCCCCS-CBCTTTCCBCSSHHHHHHHHTTTT
T ss_pred             CCccccCCCCC-eeCCCCCchhCCHHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=48.22  Aligned_cols=35  Identities=29%  Similarity=0.581  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2em3_A            2 SSGSSGTGEKP-YECKVCSKAFTQKAHLAQHQKTHT   36 (46)
T ss_dssp             CCCCCCSSCCS-EECSSSCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCCCcC-eECCCCCcccCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.8e-09  Score=48.06  Aligned_cols=35  Identities=23%  Similarity=0.531  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eow_A            2 SSGSSGTGEKP-YKCNECGKAFRARSSLAIHQATHS   36 (46)
T ss_dssp             CCCCCSCCCCC-EECTTSCCEESSHHHHHHHHHHHC
T ss_pred             CccCCCCCCCC-eeccccCChhcCHHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.78  E-value=2e-09  Score=47.93  Aligned_cols=35  Identities=23%  Similarity=0.455  Sum_probs=31.8

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2el4_A            2 SSGSSGTGVKP-YGCSQCAKTFSLKSQLIVHQRSHT   36 (46)
T ss_dssp             CCCCCSCCCCS-EECSSSSCEESSHHHHHHHGGGSS
T ss_pred             ccccCCCCCCc-eECCCCCchhCCHHHHHHHHHHhC
Confidence            46778899888 999999999999999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4.5e-09  Score=44.29  Aligned_cols=33  Identities=15%  Similarity=0.315  Sum_probs=22.6

Q ss_pred             cccccCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         36 VLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        36 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      .|++++||.|..|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            456667777777777777777777777766553

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2e-09  Score=47.93  Aligned_cols=35  Identities=26%  Similarity=0.546  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep1_A            2 SSGSSGTGEKP-YECSDCGKSFIKKSQLHVHQRIHT   36 (46)
T ss_dssp             CCCCCCSSCCS-SCCSSSCCCCSSHHHHHHHHGGGS
T ss_pred             ccccCCCCCCC-cCCCCCCchhCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.78  E-value=1.8e-09  Score=48.07  Aligned_cols=35  Identities=20%  Similarity=0.451  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ema_A            2 SSGSSGTGEKR-YKCNECGKVFSRNSQLSQHQKIHT   36 (46)
T ss_dssp             CSCSSCTTSCC-EECSSSCCEESSHHHHHHHHTGGG
T ss_pred             CCccCCCCCcC-cCCCCCcchhCCHHHHHHHHHhcC
Confidence            46778889888 999999999999999999999875

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.78  E-value=1.7e-09  Score=48.22  Aligned_cols=35  Identities=23%  Similarity=0.517  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emj_A            2 SSGSSGTGEKP-FECAECGKSFSISSQLATHQRIHT   36 (46)
T ss_dssp             CCCCCCCCCCS-EECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCC-EECCCCCcccCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2e-09  Score=47.89  Aligned_cols=35  Identities=29%  Similarity=0.550  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yts_A            2 SSGSSGTGEKP-YICNECGKSFIQKSHLNRHRRIHT   36 (46)
T ss_dssp             CCSCCCCSCCS-EECSSSCCEESSHHHHHHHGGGTS
T ss_pred             CCCCCCCCCcC-EECCCCChhhCChHHHHHHHHhcC
Confidence            46778889888 999999999999999999999875

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.7e-09  Score=47.68  Aligned_cols=35  Identities=23%  Similarity=0.431  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2en7_A            2 SSGSSGTGMKP-YVCNECGKAFRSKSYLIIHTRTHT   36 (44)
T ss_dssp             CSCCCSSSSSS-SCCTTTCCCCSSHHHHHHHHTTTC
T ss_pred             CCCcCCCCCcC-eECCCCCCccCCHHHHHHHhhhcC
Confidence            46778889888 999999999999999999999875

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.78  E-value=1.7e-09  Score=48.17  Aligned_cols=35  Identities=23%  Similarity=0.560  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emk_A            2 SSGSSGTGEKP-YECKECGKAFSQTTHLIQHQRVHT   36 (46)
T ss_dssp             CCCCCCSSSCS-CBCSSSCCBCSCHHHHHHHHHHHS
T ss_pred             CCCCccCCCCc-eECCCCCchhCCHHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.6e-09  Score=47.59  Aligned_cols=35  Identities=17%  Similarity=0.270  Sum_probs=31.3

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoy_A            2 SSGSSGQKEKC-FKCNKCEKTFSCSKYLTQHERIHT   36 (46)
T ss_dssp             CCCCCCCCSCC-EECSSSCCEESSSHHHHHHHTTCC
T ss_pred             CCccccCCCCC-EECcCCCCcCCCHHHHHHHHHHcC
Confidence            36678888888 999999999999999999999875

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2e-09  Score=47.48  Aligned_cols=34  Identities=21%  Similarity=0.419  Sum_probs=30.5

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         1 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   34 (44)
T 2emx_A            1 GSSGSSGEKP-FGCSCCEKAFSSKSYLLVHQQTHA   34 (44)
T ss_dssp             CCCCCSSCCC-EECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCcCCCcC-ccCCCCCcccCCHHHHHHHHHHhC
Confidence            4567888888 999999999999999999999875

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=48.03  Aligned_cols=35  Identities=23%  Similarity=0.504  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq2_A            2 SSGSSGTGGKP-YQCNECGKAFSQTSKLARHQRVHT   36 (46)
T ss_dssp             CCCCSSSSSCS-SSCCSSCCCCSSHHHHHHHGGGGC
T ss_pred             CcccccCCCCC-eECCCCCcccCCHHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2e-09  Score=47.04  Aligned_cols=34  Identities=29%  Similarity=0.622  Sum_probs=30.6

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   35 (42)
T 2eos_A            2 SSGSSGGEKP-YPCEICGTRFRHLQTLKSHLRIHT   35 (42)
T ss_dssp             CCSCCSSSCC-BCCSSSCCCBSSHHHHHHHTTTTS
T ss_pred             CCcccCCCCC-EECCCCCCccCCHHHHHHHHHhcC
Confidence            5677888888 999999999999999999999875

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.2e-09  Score=48.67  Aligned_cols=35  Identities=26%  Similarity=0.537  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoz_A            2 SSGSSGTGEKP-YSCNVCGKAFVLSAHLNQHLRVHT   36 (46)
T ss_dssp             CSCCCCSSCCS-EEETTTTEEESSHHHHHHHHHHHS
T ss_pred             CccccCCCCCC-eECcccChhhCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.2e-09  Score=47.76  Aligned_cols=35  Identities=20%  Similarity=0.503  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytf_A            2 SSGSSGTGEKP-FECSECQKAFNTKSNLIVHQRTHT   36 (46)
T ss_dssp             CCCCSSCCCCS-EECSSSCCEESSHHHHHHHHHTSC
T ss_pred             CCCCCCCCCCC-cCCCCCCcccCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.7e-09  Score=48.14  Aligned_cols=35  Identities=23%  Similarity=0.478  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emy_A            2 SSGSSGTGENP-YECHECGKAFSRKYQLISHQRTHA   36 (46)
T ss_dssp             CCCCCCCSSCC-EECSSSCCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCcC-cCCCCCCcccCcHHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.2e-09  Score=47.80  Aligned_cols=35  Identities=26%  Similarity=0.629  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yth_A            2 SSGSSGSGEKP-FQCEECGKRFTQNSHLHSHQRVHT   36 (46)
T ss_dssp             CCCSCCCCSSS-BCCSSSCCCBSSHHHHHHHGGGGT
T ss_pred             CcccCCCCCcC-CCCCCCCcccCCHHHHHHHHHhcC
Confidence            46778888888 999999999999999999999875

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2e-09  Score=47.87  Aligned_cols=35  Identities=26%  Similarity=0.461  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emm_A            2 SSGSSGTGERP-HKCNECGKSFIQSAHLIQHQRIHT   36 (46)
T ss_dssp             CCCSCSSCCCS-EECSSSCCEESSHHHHHHHHHHHS
T ss_pred             CCcCCcCCCCC-eeCCCCChhhCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2e-09  Score=47.93  Aligned_cols=35  Identities=23%  Similarity=0.495  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eov_A            2 SSGSSGTGEKP-YKCSDCGKSFTWKSRLRIHQKCHT   36 (46)
T ss_dssp             CCCCCCSSCCS-CBCSSSCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCC-ccCCccChhhCCHHHHHHHHHhcC
Confidence            46778889888 999999999999999999999875

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2e-09  Score=47.90  Aligned_cols=35  Identities=31%  Similarity=0.582  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yrj_A            2 SSGSSGTGEKP-YRCGECGKAFAQKANLTQHQRIHT   36 (46)
T ss_dssp             CCCCCCCCCCC-EECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCccCCCCCCC-eECCCCCCccCCHHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.8e-09  Score=48.11  Aligned_cols=35  Identities=20%  Similarity=0.437  Sum_probs=31.3

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2en3_A            2 SSGSSGTGEKP-FQCKECGMNFSWSCSLFKHLRSHE   36 (46)
T ss_dssp             CCCCCSCCCCS-EECSSSCCEESSSHHHHHHHHHHH
T ss_pred             ccccccCCCCC-eeCcccChhhCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999998864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.9e-09  Score=48.06  Aligned_cols=35  Identities=23%  Similarity=0.480  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yto_A            2 SSGSSGTGEKP-YKCSDCGKAFTRKSGLHIHQQSHT   36 (46)
T ss_dssp             CCCCCCCSCCC-EECSSSCCEESSHHHHHHHHHHHT
T ss_pred             CcccccCCCCC-EECcccCCccCCHhHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.6e-09  Score=47.52  Aligned_cols=35  Identities=26%  Similarity=0.527  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emg_A            2 SSGSSGTGENP-FICSECGKVFTHKTNLIIHQKIHT   36 (46)
T ss_dssp             CCCCCCCSCCS-CBCTTTCCBCSSHHHHHHHHTTTS
T ss_pred             CCCCCCCCCCC-EECCccCcccCCHHHHHHHHHHhC
Confidence            46778888888 999999999999999999999875

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.4e-09  Score=48.45  Aligned_cols=35  Identities=23%  Similarity=0.517  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eoo_A            2 SSGSSGSGERP-YGCNECGKNFGRHSHLIEHLKRHF   36 (46)
T ss_dssp             CCCCCCSCCCC-EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCC-EEccccCcccCCHHHHHHHHHHHc
Confidence            46778899888 999999999999999999999874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5.1e-09  Score=44.10  Aligned_cols=33  Identities=24%  Similarity=0.331  Sum_probs=22.5

Q ss_pred             cccccCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         36 VLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        36 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      .|++++||.|..|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            456667777777777777777777777666553

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.4e-09  Score=47.68  Aligned_cols=35  Identities=26%  Similarity=0.582  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eq0_A            2 SSGSSGTGEKP-YKCHECGKVFRRNSHLARHQLIHT   36 (46)
T ss_dssp             CCCCCTTCCCC-EECTTTCCEESSHHHHHHHHTTTC
T ss_pred             CCCcCCCCCCC-eECCCCCchhCCHHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.4e-09  Score=47.71  Aligned_cols=35  Identities=29%  Similarity=0.475  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em4_A            2 SSGSSGTGQRP-YECIECGKAFKTKSSLICHRRSHT   36 (46)
T ss_dssp             CSCCCCCCSSS-EECSSSCCEESSHHHHHHHHHHHS
T ss_pred             CCccccCCCcC-cCCCCCCCccCCHHHHHHHHHhcC
Confidence            36778889888 999999999999999999999875

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.1e-09  Score=47.85  Aligned_cols=35  Identities=29%  Similarity=0.593  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq1_A            2 SSGSSGTGEKP-YKCNECGKAFRAHSNLTTHQVIHT   36 (46)
T ss_dssp             CCCCCCCCSCC-CCCTTTTCCCSSHHHHHHHHTTTC
T ss_pred             CcccccCCCCC-eECCcCChhhCCHHHHHHHHHHhC
Confidence            46778888888 999999999999999999999875

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.77  E-value=2.7e-09  Score=46.52  Aligned_cols=34  Identities=21%  Similarity=0.426  Sum_probs=30.5

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 H~~~H~~~~~-~~C~~C~k~f~~~~~l~~H~~~H~   35 (42)
T 2epc_A            2 SSGSSGGETP-YLCGQCGKSFTQRGSLAVHQRSCS   35 (42)
T ss_dssp             CCSCCCSSCC-EECSSSCCEESSHHHHHHHHHHTT
T ss_pred             CCccCCCCCC-eECCCCCcccCCHHHHHHHhhhcC
Confidence            5667888888 999999999999999999999875

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3e-09  Score=47.35  Aligned_cols=35  Identities=20%  Similarity=0.433  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2epz_A            2 SSGSSGTGEKP-FDCIDCGKAFSDHIGLNQHRRIHT   36 (46)
T ss_dssp             CCCSSCCCCCS-BCCTTTCCCBSSHHHHHHHHTTTT
T ss_pred             CCCCCcCCCCC-eECCCCCceeCCHHHHHHHHHHhC
Confidence            36778889888 999999999999999999999875

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.8e-09  Score=47.59  Aligned_cols=35  Identities=23%  Similarity=0.477  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eoj_A            2 SSGSSGTGENP-YECCECGKVFSRKDQLVSHQKTHS   36 (44)
T ss_dssp             CSCCSSSSCCS-CEETTTTEECSSHHHHHHHHTTSS
T ss_pred             CCccccCCCcC-eeCCCCCCccCCHHHHHHHHHHcC
Confidence            46778999888 999999999999999999999875

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.7e-09  Score=47.09  Aligned_cols=34  Identities=29%  Similarity=0.601  Sum_probs=30.6

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         3 h~~~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2enh_A            3 SGSSGTGEKP-YECDVCRKAFSHHASLTQHQRVHS   36 (46)
T ss_dssp             CCCCCCCSSS-CBCTTTCCBCSSSHHHHHHGGGSC
T ss_pred             CCCCcCCCCC-cCCCCcCchhCCHHHHHHHHHHhC
Confidence            5567888888 999999999999999999999875

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2e-09  Score=47.90  Aligned_cols=35  Identities=23%  Similarity=0.526  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytr_A            2 SSGSSGTGEKP-YKCNECGKAFSQTSKLARHQRIHT   36 (46)
T ss_dssp             CSSCCCSSCCT-TCCTTTCCCCSSHHHHHHHHTTTT
T ss_pred             CCCcCCCCCcC-cCCCCCCCccCCHHHHHHHHHhcC
Confidence            46778889888 999999999999999999999875

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.7e-09  Score=48.14  Aligned_cols=35  Identities=23%  Similarity=0.489  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emh_A            2 SSGSSGTGERP-YICTVCGKAFTDRSNLIKHQKIHT   36 (46)
T ss_dssp             CCCCSCSCCCS-EECTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCC-cCCCCCCchhCCHHHHHHHHHhcC
Confidence            46778889888 999999999999999999999874

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.7e-09  Score=47.48  Aligned_cols=35  Identities=26%  Similarity=0.546  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep2_A            2 SSGSSGTGEKP-YECSICGKSFTKKSQLHVHQQIHT   36 (46)
T ss_dssp             CSSSCSSCCCS-EECSSSCCEESSHHHHHHHHHTTS
T ss_pred             CCCCCCCCCcC-cCCCCCCcccCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2e-09  Score=47.97  Aligned_cols=35  Identities=26%  Similarity=0.575  Sum_probs=31.4

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2yti_A            2 SSGSSGTGEKP-YKCNECGKVFTQNSHLARHRGIHT   36 (46)
T ss_dssp             CCCCCCSCCCT-TCCSSSCCCCSSHHHHHHHHTTTS
T ss_pred             CCCcCCCCCcC-eECCCCCcccCChhHHHHHhHhcC
Confidence            46778888888 999999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=6.1e-09  Score=43.77  Aligned_cols=33  Identities=21%  Similarity=0.248  Sum_probs=23.1

Q ss_pred             cccccCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         36 VLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        36 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      +|++++||.|..|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            466677777777777777777777777766653

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.4e-09  Score=47.67  Aligned_cols=35  Identities=17%  Similarity=0.440  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoq_A            2 SSGSSGTGEKP-FKCDICGKSFCGRSRLNRHSMVHT   36 (46)
T ss_dssp             CCCCCSSSSCS-CCCSSSCCCCSSHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCC-cCCCcCCchhCCHHHHHHHHHHcC
Confidence            46778888888 999999999999999999999875

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.3e-09  Score=47.19  Aligned_cols=35  Identities=23%  Similarity=0.478  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em7_A            2 SSGSSGTGEKP-YKCEECGKGFICRRDLYTHHMVHT   36 (46)
T ss_dssp             CCCCSSSCCCS-EECSSSCCEESCHHHHHHHGGGGT
T ss_pred             CCCCCCCCCcC-ccCCCccchhCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.1e-09  Score=47.32  Aligned_cols=35  Identities=17%  Similarity=0.429  Sum_probs=31.4

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~h~~~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2elz_A            2 SSGSSGSVEKP-YKCEDCGKGYNRRLNLDMHQRVHM   36 (46)
T ss_dssp             CCCSCCCCCSS-CBCSSSCCBCSSHHHHHHHGGGGG
T ss_pred             CCCCCCCCCCC-eeCcccCchhCCHHHHHHHHHhcC
Confidence            36678889888 999999999999999999999875

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.4e-09  Score=47.72  Aligned_cols=35  Identities=23%  Similarity=0.352  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em5_A            2 SSGSSGSSTKS-HQCHECGRGFTLKSHLNQHQRIHT   36 (46)
T ss_dssp             CCCCCCCCSCS-EECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCcCCCCCCCC-eECCcCCCccCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.8e-09  Score=47.43  Aligned_cols=35  Identities=26%  Similarity=0.572  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ene_A            2 SSGSSGTGEKP-YKCNECGKVFRHNSYLSRHQRIHT   36 (46)
T ss_dssp             CCCSSCCCSSS-EECSSSCCEESSHHHHHHHHTTTC
T ss_pred             CcccCCCCCCC-eECCCCCchhCChHHHHHHHhhcC
Confidence            46778889888 999999999999999999999875

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.4e-09  Score=47.64  Aligned_cols=35  Identities=23%  Similarity=0.591  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytg_A            2 SSGSSGTGEKP-FKCGECGKSYNQRVHLTQHQRVHT   36 (46)
T ss_dssp             CCCCCCSSCCS-EECTTTCCEESSSHHHHTTGGGGS
T ss_pred             CCCCCCCCCCC-eECCCCCcccCCHHHHHHHHHHcC
Confidence            46778888888 999999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.76  E-value=4.4e-09  Score=44.86  Aligned_cols=34  Identities=15%  Similarity=0.169  Sum_probs=28.8

Q ss_pred             ccccCeeecc--ccccccccchhHHHHhhhhcCCCC
Q psy12015         37 LTVHIDLKCD--VCEKGYRYKTGLWRHKKFECGQEP   70 (96)
Q Consensus        37 ~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~   70 (96)
                      |++++||.|.  .|++.|.....|..|+++|.++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            4678889998  599999999999999998888766

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.76  E-value=3.5e-09  Score=47.07  Aligned_cols=35  Identities=20%  Similarity=0.486  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em9_A            2 SSGSSGTGEKP-YNCKECGKSFRWASCLLKHQRVHS   36 (46)
T ss_dssp             CSCCSCCCCCS-EECSSSCCEESSHHHHHHHGGGGT
T ss_pred             CCCCCCCCCcC-eECCccccccCChHHHHHHHHHhC
Confidence            46778899888 999999999999999999999875

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.3e-09  Score=47.25  Aligned_cols=35  Identities=26%  Similarity=0.507  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytq_A            2 SSGSSGAGEKP-YGCSECGKAFSSKSYLIIHMRTHS   36 (46)
T ss_dssp             CCSSCSSCCCS-CBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             CCCcCcCCCCC-cCCCccChhhCChHHHHHHHHHhC
Confidence            36778899888 999999999999999999999875

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.7e-09  Score=47.54  Aligned_cols=35  Identities=23%  Similarity=0.472  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em6_A            2 SSGSSGMGEKC-YKCDVCGKEFSQSSHLQTHQRVHT   36 (46)
T ss_dssp             CCCSCCCCCCC-CBCSSSCCBCSSHHHHHHHHTTTS
T ss_pred             CCccccCCCCC-eECCCCCcccCCHHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.8e-09  Score=47.53  Aligned_cols=34  Identities=24%  Similarity=0.576  Sum_probs=30.9

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         3 h~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eon_A            3 SGSSGTGEKP-YKCQVCGKAFRVSSHLVQHHSVHS   36 (46)
T ss_dssp             CSSSCSSCCS-CBCSSSCCBCSSHHHHHHHTTTTT
T ss_pred             CCCCCCCCcc-cCCCCCCcccCcHHHHHHHHHhcC
Confidence            5678888888 999999999999999999999875

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2e-09  Score=47.87  Aligned_cols=35  Identities=26%  Similarity=0.578  Sum_probs=31.7

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eoe_A            2 SSGSSGTGEKP-YKCNECGKVFTQNSHLANHQRIHT   36 (46)
T ss_dssp             CCSSCCCCCCS-SEETTTTEECSSHHHHHHHHGGGS
T ss_pred             CCCCCCCCCCC-eECCCcChhhCCHHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=2.7e-09  Score=47.47  Aligned_cols=35  Identities=14%  Similarity=0.242  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2en8_A            2 SSGSSGSGEKS-HTCDECGKNFCYISALRIHQRVHM   36 (46)
T ss_dssp             CCCCCCCCCSS-EECTTTCCEESSHHHHHHHHTTTC
T ss_pred             CccccCCCCCC-eECCCcCcccCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.1e-09  Score=46.83  Aligned_cols=35  Identities=17%  Similarity=0.366  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|.
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2emb_A            2 SSGSSGHTRKR-YECSKCQATFNLRKHLIQHQKTHA   36 (44)
T ss_dssp             CCCSCCCCCSS-EECTTTCCEESCHHHHHHHGGGGC
T ss_pred             CcccccCCCCC-eECCCCCCccCCHHHHHHHHHHcC
Confidence            46778888888 999999999999999999999875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.75  E-value=3.4e-09  Score=51.55  Aligned_cols=46  Identities=17%  Similarity=0.296  Sum_probs=42.0

Q ss_pred             cccccccchhhhhhhccccccccCeeeccc--cccccccchhHHHHhhhh
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDV--CEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~   65 (96)
                      +++.|.....|..|+  ++|.+++||.|..  |++.|.....|..|+++|
T Consensus        25 C~k~f~~~~~L~~H~--~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           25 CGKTYFKSSHLKAHT--RTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             TCCEESSHHHHHHHH--HHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCCHHHHHHHH--HhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            788999999999999  8999999999964  999999999999998764

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.5e-09  Score=47.59  Aligned_cols=35  Identities=29%  Similarity=0.601  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytk_A            2 SSGSSGSGEKP-YKCNECGKVFTQNSHLTNHWRIHT   36 (46)
T ss_dssp             CCCCCSSSSCS-EECSSSCCEESSHHHHHHHHHHHS
T ss_pred             CCcccCCCCCC-EeCCcCCCccCCHHHHHHHHHHHC
Confidence            46778889888 999999999999999999999875

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.9e-09  Score=47.97  Aligned_cols=35  Identities=23%  Similarity=0.556  Sum_probs=31.4

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yu8_A            2 SSGSSGTGEKP-YKCNECGKVFTQNSHLARHRRVHT   36 (46)
T ss_dssp             CCCCCCCCCSS-EECSSSCCEESSSHHHHHHTHHHH
T ss_pred             CcCcCCCCCCC-eECCcCCchhCCHHHHHHHHHhcC
Confidence            46778889888 999999999999999999998874

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2e-09  Score=46.98  Aligned_cols=34  Identities=32%  Similarity=0.624  Sum_probs=30.4

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.++++ |.|..|++.|.....|..|+++|.
T Consensus         2 H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   35 (42)
T 2en2_A            2 SSGSSGGEKP-YKCETCGARFVQVAHLRAHVLIHT   35 (42)
T ss_dssp             CCCCCCSSCS-EECTTTCCEESSHHHHHHHTHHHH
T ss_pred             CCcccCCCCC-EeCCCcChhhCCHHHHHHHHHHcC
Confidence            5667888888 999999999999999999998874

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2e-09  Score=47.91  Aligned_cols=35  Identities=29%  Similarity=0.464  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emp_A            2 SSGSSGTGVKP-YMCNECGKAFSVYSSLTTHQVIHT   36 (46)
T ss_dssp             CCCSCSSCCCS-EECSSSCCEESCHHHHHHHHHHHH
T ss_pred             CcccccCCCcC-eECCCCCchhCCHHHHHHHHHHcC
Confidence            46778899888 999999999999999999999874

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.8e-09  Score=47.46  Aligned_cols=35  Identities=20%  Similarity=0.572  Sum_probs=31.8

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2en1_A            2 SSGSSGSGEKP-FKCEECGKRFTQNSQLHSHQRVHT   36 (46)
T ss_dssp             CSTTCCCCCCS-EEETTTTEEESSHHHHHHHGGGGS
T ss_pred             CcccCCCCCCC-eeCCCCCcccCCHHHHHHHHHHcC
Confidence            46788999888 999999999999999999999875

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.8e-09  Score=47.45  Aligned_cols=35  Identities=26%  Similarity=0.588  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytd_A            2 SSGSSGSGEKP-YKCSECGKAFHRHTHLNEHRRIHT   36 (46)
T ss_dssp             CCCCCSCCCCS-EECSSSCCEESSHHHHHHHHHHHT
T ss_pred             CCccccCCCcC-eECCCCCCeeCChHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3e-09  Score=47.37  Aligned_cols=35  Identities=20%  Similarity=0.440  Sum_probs=31.4

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~h~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2en9_A            2 SSGSSGAGKKL-FKCNECKKTFTQSSSLTVHQRIHT   36 (46)
T ss_dssp             CCCSSCCSSCC-CBCTTTCCBCSSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCC-EECCccCcccCCHHHHHHHHHHcC
Confidence            46678889888 999999999999999999999875

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=4.2e-09  Score=46.83  Aligned_cols=35  Identities=14%  Similarity=0.370  Sum_probs=31.4

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~h~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2enc_A            2 SSGSSGSGEKP-FKCEECGKGFYTNSQCYSHQRSHS   36 (46)
T ss_dssp             CCSSCCCCCCS-EECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCC-cCCCCCCCcCCChHHHHHHHHHhC
Confidence            36678889888 999999999999999999999875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.6e-09  Score=47.50  Aligned_cols=35  Identities=26%  Similarity=0.552  Sum_probs=31.4

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eor_A            2 SSGSSGTGEKP-YNCEECGKAFIHDSQLQEHQRIHT   36 (46)
T ss_dssp             CSSSSSSCCCS-EECTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCcCcCCCcC-ccCCCCCCCcCCHHHHHHHHHhcC
Confidence            46778889888 999999999999999999999874

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.73  E-value=4e-09  Score=46.94  Aligned_cols=35  Identities=23%  Similarity=0.489  Sum_probs=31.4

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~h~~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2el6_A            2 SSGSSGAGVNP-YKCSQCEKSFSGKLRLLVHQRMHT   36 (46)
T ss_dssp             CSCCSSCCCCS-EECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCCCCC-eECCCCCcccCCHHHHHHHHHHcC
Confidence            35678889888 999999999999999999999875

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=4e-09  Score=46.94  Aligned_cols=35  Identities=23%  Similarity=0.626  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em2_A            2 SSGSSGSGEKP-FKCKECGKAFRQNIHLASHLRIHT   36 (46)
T ss_dssp             CCCCSCCCCCS-EECSSSCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCC-EECCcCCchhCCHHHHHHHHHHhC
Confidence            36778889888 999999999999999999999875

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.5e-09  Score=47.62  Aligned_cols=35  Identities=20%  Similarity=0.571  Sum_probs=31.3

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~h~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emz_A            2 SSGSSGSGERP-FKCNECGKGFGRRSHLAGHLRLHS   36 (46)
T ss_dssp             CCCSCSSCCCS-CCCSSSCCCCSSHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCC-eECCCCCcccCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999874

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.72  E-value=5.9e-09  Score=47.01  Aligned_cols=35  Identities=26%  Similarity=0.416  Sum_probs=28.5

Q ss_pred             cccccCeeeccccccccccchhHHHHhh-hhcCCCC
Q psy12015         36 VLTVHIDLKCDVCEKGYRYKTGLWRHKK-FECGQEP   70 (96)
Q Consensus        36 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~   70 (96)
                      +|++++||.|..|++.|.....|..|++ +|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4788999999999999999999999999 8888655

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.4e-09  Score=47.63  Aligned_cols=35  Identities=31%  Similarity=0.595  Sum_probs=31.6

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq3_A            2 SSGSSGTGEKP-YECNQCGKAFSVRSSLTTHQAIHT   36 (46)
T ss_dssp             CCCCSSCCCCS-SEETTTTEECSSHHHHHHHHTTSC
T ss_pred             CcccCCCCCCC-eECCCCChhhCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4.8e-09  Score=46.64  Aligned_cols=35  Identities=14%  Similarity=0.194  Sum_probs=31.4

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yso_A            2 SSGSSGSREKS-HQCRECGEIFFQYVSLIEHQVLHM   36 (46)
T ss_dssp             CCSCCSSCCCC-EECTTTCCEESSHHHHHHHHHHHS
T ss_pred             CcccccCCCCC-EEccccChhhCCHHHHHHHHHHhC
Confidence            36678889888 999999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.72  E-value=7.6e-09  Score=42.90  Aligned_cols=32  Identities=16%  Similarity=0.232  Sum_probs=26.8

Q ss_pred             CeeeccccccccccchhHHHHhhhhcCCCCcee
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQ   73 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~   73 (96)
                      +||.|..|++.|.....|..|+++|.++++ |.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE-ER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC-CC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC-CC
Confidence            478899999999998899999988888776 64

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=3.7e-09  Score=44.80  Aligned_cols=32  Identities=19%  Similarity=0.498  Sum_probs=28.8

Q ss_pred             hhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         63 KFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        63 ~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            2 SSGSSGRS-YSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCCC-CEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCCCC-cCCCCCCCccCCHHHHHHHHHHHc
Confidence            45778788 999999999999999999999876

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.1e-09  Score=47.42  Aligned_cols=35  Identities=23%  Similarity=0.387  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~H~~~H~~~~~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (44)
T 2eox_A            2 SSGSSGTDSKS-YNCNECGKAFTRIFHLTRHQKIHT   36 (44)
T ss_dssp             CCCCCCCCCCC-EEETTTTEEESSSHHHHTTHHHHC
T ss_pred             CCCcCCCCCCC-eECcccCcccCCHHHHHHHHHHhC
Confidence            46778889888 999999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1e-08  Score=43.03  Aligned_cols=33  Identities=24%  Similarity=0.363  Sum_probs=21.9

Q ss_pred             cccccCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         36 VLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        36 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      .|++++||.|..|++.|.....|..|+++|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            455666677777777777777777776666553

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.71  E-value=9.5e-09  Score=42.85  Aligned_cols=30  Identities=23%  Similarity=0.494  Sum_probs=27.2

Q ss_pred             hcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         65 ECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        65 ~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 h~~~k~-~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            2 SSGSSG-YVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCCS-EECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCC-eECCCCcchhCCHHHHHHHHHHHc
Confidence            567777 999999999999999999999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.9e-09  Score=47.40  Aligned_cols=35  Identities=23%  Similarity=0.488  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~h~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2en6_A            2 SSGSSGSGEKP-YGCNECGKTFSQKSILSAHQRTHT   36 (46)
T ss_dssp             CCSCCCCSSCC-EEETTTTEEESSHHHHHHHHHHHS
T ss_pred             CCCCccCCCcC-eECCCCCcccCchHHHHHHHHHcC
Confidence            46778889888 999999999999999999999875

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3.6e-09  Score=47.08  Aligned_cols=35  Identities=23%  Similarity=0.517  Sum_probs=31.5

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~H~~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ysp_A            2 SSGSSGTGEKP-YKCEKCGKGYNSKFNLDMHQKVHT   36 (46)
T ss_dssp             CCCCCCSSCCS-EEETTTTEEESCHHHHHHHHTTSC
T ss_pred             CCCcCCCCCCC-eECCCCCCccCCHHHHHHHHHhhC
Confidence            36778889888 999999999999999999999875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.69  E-value=1.2e-08  Score=42.62  Aligned_cols=30  Identities=23%  Similarity=0.571  Sum_probs=27.2

Q ss_pred             hcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         65 ECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        65 ~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 H~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            2 SSGKRP-FVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSC-EECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCcC-eeCCCCCcccCCHHHHHHHHHHcC
Confidence            567777 999999999999999999999875

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.6e-09  Score=47.13  Aligned_cols=35  Identities=20%  Similarity=0.449  Sum_probs=31.1

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|.+|+++|+
T Consensus         2 ~h~~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytm_A            2 SSGSSGTGEKP-YKCMECGKAFGDNSSCTQHQRLHT   36 (46)
T ss_dssp             CSCCCCSSCCS-SSBTTTTBCCSSHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCC-cCCCCCCchhCCHHHHHHHHHHcC
Confidence            35678888888 999999999999999999999874

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=6.7e-09  Score=45.75  Aligned_cols=34  Identities=18%  Similarity=0.352  Sum_probs=30.5

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         3 h~~~h~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eou_A            3 SGSSGAAKTT-SECQECGKIFRHSSLLIEHQALHA   36 (44)
T ss_dssp             CSCSCSSSCC-CCCTTTCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCCCCCcC-eECCCCCcccCCHHHHHHHHHHHC
Confidence            5667888888 999999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.68  E-value=1.7e-08  Score=45.23  Aligned_cols=34  Identities=12%  Similarity=0.203  Sum_probs=26.6

Q ss_pred             ccccccCeeecc--ccccccccchhHHHHhhhhcCC
Q psy12015         35 NVLTVHIDLKCD--VCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        35 ~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      ..|++++||.|.  .|++.|.....|..|+++|.++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            467888888885  6888888888888888887764

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=7.5e-09  Score=46.13  Aligned_cols=35  Identities=20%  Similarity=0.428  Sum_probs=31.1

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHh-hcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMA-IKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r-~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|++ +|.
T Consensus         2 ~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~~H~   37 (47)
T 2epx_A            2 SSGSSGTGKKP-YECIECGKAFIQNTSLIRHWRYYHT   37 (47)
T ss_dssp             CCCCCCCCCCS-BCCSSSCCCBSSHHHHHHHHTTTTT
T ss_pred             ccccccCCCCC-EECCccCchhCChHHHHHHhHhhcC
Confidence            36778889888 999999999999999999999 764

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=5.6e-09  Score=46.45  Aligned_cols=35  Identities=23%  Similarity=0.520  Sum_probs=31.0

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|+++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         2 ~h~~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em8_A            2 SSGSSGSGEKP-YKCVECGKGYKRRLDLDFHQRVHT   36 (46)
T ss_dssp             CCCCCCCSCCS-EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCC-eECcccCchhCCHHHHHHHHHHHc
Confidence            35677888888 999999999999999999999874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=2e-08  Score=42.22  Aligned_cols=31  Identities=19%  Similarity=0.443  Sum_probs=19.2

Q ss_pred             ccccCeeeccccccccccchhHHHHhhhhcC
Q psy12015         37 LTVHIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        37 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      +.+++||.|..|++.|.....|..|+++|.+
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            4455666666666666666666666666554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=6.6e-09  Score=44.15  Aligned_cols=32  Identities=22%  Similarity=0.347  Sum_probs=28.0

Q ss_pred             hhhcCCCCceeCCCCCCCCCCchhHHHH-HhhcC
Q psy12015         63 KFECGQEPKYQCPHCPHRSKHKAHLTTH-MAIKH   95 (96)
Q Consensus        63 ~~~~~~~~~~~C~~c~~~f~~~~~l~~h-~r~~h   95 (96)
                      ++|.++++ |.|..|++.|.....|..| +++|.
T Consensus         2 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            2 SSGSSGHL-YYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             CSSSSSCE-EECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CccCCCcC-eECCCCCcccCCHHHHHHHHHHHcc
Confidence            45778777 9999999999999999999 88764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.6e-08  Score=43.56  Aligned_cols=30  Identities=20%  Similarity=0.464  Sum_probs=26.8

Q ss_pred             hcCCCCceeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         65 ECGQEPKYQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        65 ~~~~~~~~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      +.+++| |.|..  |++.|...+.|.+|+++|+
T Consensus         4 ~~gekp-~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            4 GSSGIL-LKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             SSCCCC-EECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCC-CCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            567777 99986  9999999999999999986

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.64  E-value=6.2e-09  Score=44.37  Aligned_cols=26  Identities=19%  Similarity=0.304  Sum_probs=22.2

Q ss_pred             ccccCeeeccccccccccchhHHHHh
Q psy12015         37 LTVHIDLKCDVCEKGYRYKTGLWRHK   62 (96)
Q Consensus        37 ~~~~~~~~c~~c~~~f~~~~~l~~h~   62 (96)
                      +.+|+||.|..|++.|...++|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46788899999999999888888887

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.9e-08  Score=42.24  Aligned_cols=31  Identities=19%  Similarity=0.356  Sum_probs=27.6

Q ss_pred             hhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         64 FECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        64 ~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|.+.++ |.|..|++.|.....|..|+++|.
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            3 SGSSGLL-YDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CSCCCCC-EECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCC-eECCCCCCccCCHHHHHHHHHHhc
Confidence            4667777 999999999999999999999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=2.1e-08  Score=42.12  Aligned_cols=31  Identities=23%  Similarity=0.556  Sum_probs=27.8

Q ss_pred             hhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         64 FECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        64 ~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            3 SGSSGKP-FKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             SSCCCCS-EECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCC-ccCCCCCchhCCHHHHHHHHHHhc
Confidence            4677778 999999999999999999999875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2.3e-08  Score=43.26  Aligned_cols=32  Identities=31%  Similarity=0.543  Sum_probs=28.6

Q ss_pred             hhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         63 KFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        63 ~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         3 ~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   34 (41)
T 2ept_A            3 SGSSGQRV-YECQECGKSFRQKGSLTLHERIHT   34 (41)
T ss_dssp             SSCCCCCC-EECSSSCCEESSHHHHHHHGGGCC
T ss_pred             CccCCCCC-eECCCCCCCcCCHHHHHHHHHHhC
Confidence            35778788 999999999999999999999875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.61  E-value=1.9e-08  Score=54.01  Aligned_cols=49  Identities=12%  Similarity=0.129  Sum_probs=44.7

Q ss_pred             cccccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         16 TKLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        16 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      ..+++.|.....|..|+  ++|  ++||.|..|++.|.....|..|++.|.+.
T Consensus        78 ~~C~k~f~~~~~l~~H~--~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           78 PLCLMPFSSSVSLKQHI--RYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTTCCEESSHHHHHHHH--HHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCcccCCHhHHHHHH--HHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            34889999999999999  778  88999999999999999999999998874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.9e-08  Score=42.54  Aligned_cols=31  Identities=16%  Similarity=0.338  Sum_probs=27.7

Q ss_pred             hhcCCCCceeCCCCCCCCCCc-hhHHHHHhhcC
Q psy12015         64 FECGQEPKYQCPHCPHRSKHK-AHLTTHMAIKH   95 (96)
Q Consensus        64 ~~~~~~~~~~C~~c~~~f~~~-~~l~~h~r~~h   95 (96)
                      +|.++++ |.|..|++.|... ..|..|+++|.
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            3 SGSSGRA-MKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             SCCCCCC-EECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCC-eECCCCChhhccCHHHHHHHHHhcC
Confidence            5677778 9999999999999 99999999874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.5e-08  Score=41.79  Aligned_cols=31  Identities=32%  Similarity=0.653  Sum_probs=27.7

Q ss_pred             hhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         64 FECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        64 ~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            3 SGSSGKP-YKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CSCCCCS-EECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCC-CCCCCCCcccCCHHHHHHHHHHcc
Confidence            4667777 999999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=5.9e-08  Score=46.75  Aligned_cols=42  Identities=19%  Similarity=0.145  Sum_probs=34.9

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCP   78 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~   78 (96)
                      ..+++++||.|..|++.|.....|..|+++|++..  ..+.+++
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~--~~~~~~~   47 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS--LQLGYID   47 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS--CCCCSCC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc--ccccccc
Confidence            35778999999999999999999999999999954  3555444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.58  E-value=3e-08  Score=44.59  Aligned_cols=31  Identities=32%  Similarity=0.518  Sum_probs=27.1

Q ss_pred             hhcCCCCceeCCCCCCCCCCchhHHHHHh-hcC
Q psy12015         64 FECGQEPKYQCPHCPHRSKHKAHLTTHMA-IKH   95 (96)
Q Consensus        64 ~~~~~~~~~~C~~c~~~f~~~~~l~~h~r-~~h   95 (96)
                      +|.++++ |.|..|++.|.....|..|++ +|.
T Consensus         1 ~Ht~~kp-~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            1 GEDRDKP-YACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             -CTTTSC-EECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCCcC-EECCCcCcccCCHHHHHHHhhhhcC
Confidence            3677788 999999999999999999999 764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=2e-08  Score=44.65  Aligned_cols=33  Identities=15%  Similarity=0.281  Sum_probs=29.4

Q ss_pred             hhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         62 KKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        62 ~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         4 ~~~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eom_A            4 GSSGHGERG-HRCSDCGKFFLQASNFIQHRRIHT   36 (46)
T ss_dssp             CCCCCCCSS-CCCSSSCCCCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCCC-cCCCCCCCeeCChHHHHHHHHHhC
Confidence            456788788 999999999999999999999875

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.2e-08  Score=44.43  Aligned_cols=33  Identities=27%  Similarity=0.542  Sum_probs=29.6

Q ss_pred             hhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         62 KKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        62 ~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         4 ~~~h~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep0_A            4 GSSGTGEKP-YKCDVCHKSFRYGSSLTVHQRIHT   36 (46)
T ss_dssp             CCSSTTCCS-EECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCCC-eeCcccCcccCChHHHHHHHHHhC
Confidence            456788888 999999999999999999999875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.5e-08  Score=44.81  Aligned_cols=33  Identities=33%  Similarity=0.676  Sum_probs=29.4

Q ss_pred             hhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         62 KKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        62 ~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         4 ~~~h~~~k~-~~C~~C~k~F~~~~~L~~H~~~H~   36 (45)
T 2epu_A            4 GSSGTGQKP-FECTHCGKSFRAKGNLVTHQRIHT   36 (45)
T ss_dssp             CCCCCSCCS-EEETTTTEEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCcC-ccCCCCCCccCChHHHHHHHHHhC
Confidence            356788788 999999999999999999999875

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.56  E-value=4.3e-08  Score=38.42  Aligned_cols=24  Identities=29%  Similarity=0.761  Sum_probs=18.1

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|..||+.|.....|..|+++|+
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            4 FSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHCC
T ss_pred             ccCCCcChhhCCHHHHHHHHHHcc
Confidence            777777777777777777777663

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.56  E-value=4.7e-08  Score=41.38  Aligned_cols=32  Identities=22%  Similarity=0.362  Sum_probs=22.5

Q ss_pred             ccccCeeecc--ccccccccchhHHHHhhhhcCC
Q psy12015         37 LTVHIDLKCD--VCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        37 ~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      |++++||.|.  .|++.|.....|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5667777776  3777777777777777777664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.56  E-value=4.7e-08  Score=41.80  Aligned_cols=30  Identities=20%  Similarity=0.494  Sum_probs=26.2

Q ss_pred             hcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         65 ECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        65 ~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.++++ |.|..|++.|.....|..|+++|+
T Consensus         1 h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   30 (39)
T 1njq_A            1 XWPPRS-YTCSFCKREFRSAQALGGHMNVHR   30 (39)
T ss_dssp             -CCSSS-EECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCCCCc-eECCCCCcccCCHHHHHHHHHHcC
Confidence            356677 999999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=4.2e-08  Score=41.06  Aligned_cols=31  Identities=19%  Similarity=0.343  Sum_probs=27.3

Q ss_pred             hhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         64 FECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        64 ~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|.++++ |.|..|++.|.....|..|+++|+
T Consensus         3 ~h~~~~~-~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            3 SGSSGKT-HLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCCSS-CBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCC-eecCcCCCCcCchHHHHHHHHHhc
Confidence            3566677 999999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=5.5e-08  Score=40.78  Aligned_cols=30  Identities=23%  Similarity=0.445  Sum_probs=26.8

Q ss_pred             hcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         65 ECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        65 ~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +.+.++ |.|..|++.|.....|..|+++|+
T Consensus         4 ~~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            4 GSSGKI-FTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TSCCCC-EECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCC-EECCCCCceeCCHHHHHHHHHHhC
Confidence            556677 999999999999999999999875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.53  E-value=3.5e-08  Score=38.80  Aligned_cols=24  Identities=29%  Similarity=0.607  Sum_probs=17.6

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|..||+.|...+.|..|+++|+
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            4 YRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             EEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcC
Confidence            777777777777777777777653

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.4e-08  Score=44.34  Aligned_cols=33  Identities=27%  Similarity=0.480  Sum_probs=29.3

Q ss_pred             hhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         62 KKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        62 ~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +++|.++++ |.|..|++.|.....|..|+++|+
T Consensus         4 ~~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytt_A            4 GSSGEGEKP-YQCSECGKSFSGSYRLTQHWITHT   36 (46)
T ss_dssp             SSSCSCCCT-TCCSSSCCCCSSHHHHHHHHTHHH
T ss_pred             CCCCCCCCC-eeCCCCCcccCCHHHHHHHHHHcC
Confidence            456788888 999999999999999999999874

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.52  E-value=4.6e-08  Score=42.82  Aligned_cols=32  Identities=25%  Similarity=0.450  Sum_probs=28.4

Q ss_pred             hhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         63 KFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        63 ~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +.|.+.++ |.|..|++.|.....|..|+++|+
T Consensus         3 ~~h~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~   34 (43)
T 2yrm_A            3 SGSSGNGA-FFCNECDCRFSEEASLKRHTLQTH   34 (43)
T ss_dssp             SCCSSSCC-BCCSSSCCCBSSHHHHHHHHHHHT
T ss_pred             cCcCCCCC-EECCCCCCeeCChHHHHHHHHhhC
Confidence            35777788 999999999999999999999875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.49  E-value=8.4e-09  Score=42.43  Aligned_cols=30  Identities=20%  Similarity=0.299  Sum_probs=24.9

Q ss_pred             CeeeccccccccccchhHHHHhhhhcCCCC
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECGQEP   70 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   70 (96)
                      +||.|..|++.|.....|..|+++|.++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            478888888888888888888888888766

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.49  E-value=9.6e-08  Score=38.03  Aligned_cols=27  Identities=22%  Similarity=0.404  Sum_probs=14.0

Q ss_pred             CeeeccccccccccchhHHHHhhhhcC
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            345555555555555555555554444

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.47  E-value=1e-07  Score=37.51  Aligned_cols=26  Identities=31%  Similarity=0.691  Sum_probs=19.8

Q ss_pred             CCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++ |.|..|++.|.....|..|+++|+
T Consensus         2 k~-~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RP-YSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CS-EECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cC-ccCCCCCcccCCHHHHHHHHHhcC
Confidence            34 788888888888888888877765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.45  E-value=1.7e-07  Score=37.11  Aligned_cols=26  Identities=19%  Similarity=0.314  Sum_probs=13.4

Q ss_pred             eeeccccccccccchhHHHHhhhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ||.|..|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            44555555555555555555555444

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.45  E-value=6e-08  Score=43.34  Aligned_cols=36  Identities=14%  Similarity=0.321  Sum_probs=30.7

Q ss_pred             HHHhhhhcCCCCceeCC--CCCCCCCCchhHHHHHhhcC
Q psy12015         59 WRHKKFECGQEPKYQCP--HCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        59 ~~h~~~~~~~~~~~~C~--~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..+...|.++++ |.|.  .|++.|...+.|..|+++|.
T Consensus         7 ~~~~~~H~~~k~-~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A            7 IDKYVKEMPDKT-FECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             GGGSCEEETTTE-EECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             HHHHhccCCCCC-eECCCCCCCCccCCHHHHHHHHHHcc
Confidence            445566888888 9996  79999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=1.2e-07  Score=37.31  Aligned_cols=28  Identities=25%  Similarity=0.504  Sum_probs=25.0

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ++||.|..|++.|.....|..|++.|.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4689999999999999999999988754

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.42  E-value=1.4e-07  Score=36.72  Aligned_cols=24  Identities=25%  Similarity=0.585  Sum_probs=20.2

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|..|++.|.....|..|+++|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            788888888888888888888775

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=1.5e-07  Score=45.34  Aligned_cols=30  Identities=17%  Similarity=0.135  Sum_probs=27.0

Q ss_pred             hcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         65 ECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        65 ~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +.++++ |.|..|++.|.....|.+|+++|+
T Consensus         8 ~~~ekp-y~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            8 LREAGI-LPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCCC-CCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCCccC-cCCCCCCCccCCHHHHHhhhhhhC
Confidence            556677 999999999999999999999986

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=8.7e-08  Score=42.24  Aligned_cols=31  Identities=32%  Similarity=0.679  Sum_probs=28.0

Q ss_pred             hhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         64 FECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        64 ~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .|.++++ |.|..|++.|.....|..|+++|+
T Consensus         4 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~   34 (45)
T 2epq_A            4 GSSGEKP-YSCPVCGLRFKRKDRMSYHVRSHD   34 (45)
T ss_dssp             CCSSCCS-SEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CcCCCCC-CcCCCCCcccCCHHHHHHHHHHcc
Confidence            4677778 999999999999999999999875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.41  E-value=2.5e-07  Score=37.59  Aligned_cols=26  Identities=35%  Similarity=0.588  Sum_probs=12.6

Q ss_pred             eeecc--ccccccccchhHHHHhhhhcC
Q psy12015         42 DLKCD--VCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~--~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ||.|.  .|++.|.....|..|+++|.+
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            44444  455555544445555444443

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=9.4e-08  Score=43.91  Aligned_cols=36  Identities=22%  Similarity=0.249  Sum_probs=32.6

Q ss_pred             ccccccccchhhhhhhccc-cccccCeeecccccccccc
Q psy12015         17 KLDFGVIRNSSVDKSLNTN-VLTVHIDLKCDVCEKGYRY   54 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~-~~~~~~~~~c~~c~~~f~~   54 (96)
                      .+++.|.....|..|+  + +|.+++||.|..|++.|.+
T Consensus        17 ~C~k~f~~~~~L~~H~--~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           17 SCGKGFSRPDHLNGHI--KQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSCCEESSHHHHHHHH--HHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCcccCCHHHHHHHH--HHhcCCCCCccCCCCCCCCCC
Confidence            3788999999999998  6 8999999999999999975

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=2.5e-07  Score=36.75  Aligned_cols=26  Identities=23%  Similarity=0.539  Sum_probs=23.9

Q ss_pred             CCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++ |.|..|++.|.....|..|+++|+
T Consensus         2 k~-~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            2 KP-YQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CC-EECTTTCCEESCHHHHHHHHHTTC
T ss_pred             cC-ccCCCCCcccCCHHHHHHHHHHhc
Confidence            45 999999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.38  E-value=2.5e-07  Score=36.76  Aligned_cols=26  Identities=23%  Similarity=0.332  Sum_probs=13.3

Q ss_pred             eeeccccccccccchhHHHHhhhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ||.|..|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHcc
Confidence            44555555555555555555555444

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.74  E-value=4e-08  Score=38.18  Aligned_cols=23  Identities=26%  Similarity=0.632  Sum_probs=17.8

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      |.|..||+.|.....|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            77777888787777777777765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.38  E-value=2.4e-07  Score=36.61  Aligned_cols=24  Identities=38%  Similarity=0.934  Sum_probs=22.9

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|..|++.|.....|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGGG
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhc
Confidence            999999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.38  E-value=2.4e-07  Score=36.57  Aligned_cols=26  Identities=23%  Similarity=0.578  Sum_probs=12.3

Q ss_pred             eeeccccccccccchhHHHHhhhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            34444444444444444444444443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.37  E-value=2e-07  Score=38.39  Aligned_cols=24  Identities=33%  Similarity=0.964  Sum_probs=22.8

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|..|++.|.....|..|+++|.
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~~H~   26 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHITLHE   26 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhC
Confidence            999999999999999999999875

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.37  E-value=2e-07  Score=36.38  Aligned_cols=27  Identities=15%  Similarity=0.353  Sum_probs=24.2

Q ss_pred             cCeeeccccccccccchhHHHHhhhhc
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999998763

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.36  E-value=2.6e-07  Score=36.36  Aligned_cols=23  Identities=30%  Similarity=0.803  Sum_probs=11.2

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      |.|..|++.|.....|..|+++|
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 2m0e_A            3 HKCPHCDKKFNQVGNLKAHLKIH   25 (29)
T ss_dssp             CCCSSCCCCCCTTTHHHHHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHh
Confidence            44444555555554554444443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=2.8e-07  Score=36.34  Aligned_cols=26  Identities=35%  Similarity=0.654  Sum_probs=14.1

Q ss_pred             eeeccccccccccchhHHHHhhhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ||.|..|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            45555555555555555555555544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.35  E-value=2.9e-07  Score=36.33  Aligned_cols=24  Identities=21%  Similarity=0.510  Sum_probs=22.8

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|..|++.|.....|..|+++|+
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             eECCCCCcccCCHHHHHHHHHHhc
Confidence            999999999999999999999875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.34  E-value=1.7e-07  Score=36.71  Aligned_cols=26  Identities=15%  Similarity=0.369  Sum_probs=23.6

Q ss_pred             cCeeeccccccccccchhHHHHhhhh
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~   65 (96)
                      ++||.|..|++.|.....|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            46899999999999999999998876

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.34  E-value=3.2e-07  Score=36.41  Aligned_cols=24  Identities=46%  Similarity=0.876  Sum_probs=22.8

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|..|++.|.....|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHc
Confidence            999999999999999999999876

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=2.1e-07  Score=41.38  Aligned_cols=34  Identities=21%  Similarity=0.456  Sum_probs=29.7

Q ss_pred             HhhhhcCCCCceeCC--CCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCP--HCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~--~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.++|.++++ |.|.  .|++.|.....|..|+++|.
T Consensus         3 ~~~~H~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~   38 (48)
T 2ent_A            3 SGSSGTGEKP-FACTWPGCGWRFSRSDELSRHRRSHS   38 (48)
T ss_dssp             CCCSSCCCCC-EECCSSSCCCEESSHHHHHHHHTTSC
T ss_pred             CCCCcCCCCC-eECCCCCCCCccCCHHHHHHHHHHhC
Confidence            3457888888 9998  89999999999999999875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.33  E-value=2.6e-07  Score=38.96  Aligned_cols=30  Identities=17%  Similarity=0.306  Sum_probs=26.3

Q ss_pred             hcCCCCceeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         65 ECGQEPKYQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        65 ~~~~~~~~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      +.+.++ |.|..  |++.|...+.|..|+++|.
T Consensus         3 ~~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            3 PGKKKQ-HICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SSSCCC-EECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCC-CCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            566677 99984  9999999999999999874

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.33  E-value=2.1e-07  Score=39.54  Aligned_cols=27  Identities=19%  Similarity=0.273  Sum_probs=23.7

Q ss_pred             hcCCCCceeCCCCCCCCCCchhHHHHHh
Q psy12015         65 ECGQEPKYQCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        65 ~~~~~~~~~C~~c~~~f~~~~~l~~h~r   92 (96)
                      ..+++| |.|..||+.|...+.|.+|+.
T Consensus         3 ~~gekp-~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPAR-FMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCC-CEETTTTEECSCHHHHHHHHH
T ss_pred             CCCccC-eECCCCCCccCCHhHccCcCC
Confidence            456677 999999999999999999973

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=2.8e-07  Score=38.96  Aligned_cols=30  Identities=23%  Similarity=0.557  Sum_probs=25.9

Q ss_pred             hcCCCCceeCC--CCCCCCCCchhHHHHHhhcC
Q psy12015         65 ECGQEPKYQCP--HCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        65 ~~~~~~~~~C~--~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.++++ |.|.  .|++.|.....|.+|+++|.
T Consensus         1 H~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~   32 (38)
T 1bhi_A            1 MSDDKP-FLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CTTCCC-EECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCcc-eECCCCCCCcccCCHHHHHHHHHHhC
Confidence            356677 9999  59999999999999999874

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=3.3e-07  Score=36.05  Aligned_cols=25  Identities=28%  Similarity=0.490  Sum_probs=22.8

Q ss_pred             CeeeccccccccccchhHHHHhhhh
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~   65 (96)
                      +||.|..|++.|.....|..|+++|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIH   25 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHh
Confidence            4799999999999999999998876

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.30  E-value=7.7e-07  Score=36.02  Aligned_cols=26  Identities=23%  Similarity=0.515  Sum_probs=23.9

Q ss_pred             CCceeCC--CCCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCP--HCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~--~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++ |.|.  .|++.|.....|..|+++|+
T Consensus         2 k~-~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            2 RP-YSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CS-BCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CC-CcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            46 9999  89999999999999999986

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.63  E-value=8.6e-08  Score=38.28  Aligned_cols=25  Identities=20%  Similarity=0.436  Sum_probs=12.2

Q ss_pred             eeeccccccccccchhHHHHhhhhc
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      ||.|..|++.|.....|..|++.|.
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            4445555555554444444444443

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.29  E-value=4.6e-07  Score=36.48  Aligned_cols=23  Identities=22%  Similarity=0.502  Sum_probs=11.5

Q ss_pred             eeCC--CCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCP--HCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~--~c~~~f~~~~~l~~h~r~~   94 (96)
                      |.|.  .||+.|.....|..|+++|
T Consensus         3 ~~C~~~~C~k~f~~~~~L~~H~~~H   27 (31)
T 1sp2_A            3 FMCTWSYCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred             cCCcCCCCCcccCCHhHHHHHHHHh
Confidence            4454  4555555555555555444

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.58  E-value=1.2e-07  Score=37.67  Aligned_cols=23  Identities=22%  Similarity=0.424  Sum_probs=11.2

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      |.|..|++.|.....|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            44444555554444444444443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.24  E-value=6.1e-07  Score=34.79  Aligned_cols=26  Identities=31%  Similarity=0.700  Sum_probs=23.1

Q ss_pred             eeeccccccccccchhHHHHhhhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ||.|..|++.|.....|..|+++|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            58899999999999999999998876

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.24  E-value=4.5e-07  Score=35.68  Aligned_cols=24  Identities=21%  Similarity=0.553  Sum_probs=22.6

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|..|++.|.....|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHHHHhc
Confidence            999999999999999999999874

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.24  E-value=7.7e-07  Score=35.78  Aligned_cols=25  Identities=28%  Similarity=0.525  Sum_probs=22.6

Q ss_pred             Ceeecc--ccccccccchhHHHHhhhh
Q psy12015         41 IDLKCD--VCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        41 ~~~~c~--~c~~~f~~~~~l~~h~~~~   65 (96)
                      +||.|.  .|++.|.....|..|+++|
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H   27 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHh
Confidence            478998  9999999999999999876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.24  E-value=7.9e-07  Score=43.15  Aligned_cols=31  Identities=26%  Similarity=0.457  Sum_probs=26.3

Q ss_pred             hhcCCCCceeCCC--CCCCCCCchhHHHHH-hhcC
Q psy12015         64 FECGQEPKYQCPH--CPHRSKHKAHLTTHM-AIKH   95 (96)
Q Consensus        64 ~~~~~~~~~~C~~--c~~~f~~~~~l~~h~-r~~h   95 (96)
                      ...|++| |.|..  |+++|...+.|.+|+ ++|.
T Consensus        21 ~~sGEKP-YkC~~~~CgKaFsr~s~L~~H~rriHT   54 (73)
T 1x3c_A           21 RYSPYRP-YRCVHQGCFAAFTIQQNLILHYQAVHK   54 (73)
T ss_dssp             SSCSSCS-CBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred             cccCCCC-eECCCCCcChhHcCHHHHHHHhhhhCC
Confidence            3567788 99975  999999999999997 5675

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.55  E-value=1.4e-07  Score=37.45  Aligned_cols=25  Identities=20%  Similarity=0.440  Sum_probs=22.5

Q ss_pred             CeeeccccccccccchhHHHHhhhh
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~   65 (96)
                      +||.|..|++.|....+|..|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            4799999999999999999998765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.55  E-value=1.5e-07  Score=37.56  Aligned_cols=26  Identities=31%  Similarity=0.703  Sum_probs=23.7

Q ss_pred             CCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++ |.|..|++.|.....|..|+++|+
T Consensus         2 k~-~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            2 KP-YVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            45 999999999999999999999875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.22  E-value=7.3e-07  Score=35.42  Aligned_cols=19  Identities=26%  Similarity=0.593  Sum_probs=10.2

Q ss_pred             eeCCCCCCCCCCchhHHHH
Q psy12015         72 YQCPHCPHRSKHKAHLTTH   90 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h   90 (96)
                      |.|..|++.|.....|..|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHH
T ss_pred             cCCcccCcccCChHHHHHH
Confidence            4555555555555555555

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.21  E-value=4.9e-07  Score=40.34  Aligned_cols=32  Identities=0%  Similarity=-0.270  Sum_probs=29.1

Q ss_pred             ccccccccchhhhhhhccccccccCeeecccccc
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEK   50 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~   50 (96)
                      .+++.|.....|..|+  ++|++++||.|..|++
T Consensus        17 ~C~k~f~~~~~L~~H~--~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           17 ICGKIFRDVYHLNRHK--LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             TTTEEESSHHHHHHHG--GGSCSCCCCCSCCCCC
T ss_pred             CCCcccCCHHHHHHHH--HhcCCCCCccCCCCCC
Confidence            3788999999999999  8999999999999974

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.18  E-value=1.2e-06  Score=34.79  Aligned_cols=25  Identities=24%  Similarity=0.622  Sum_probs=21.8

Q ss_pred             CeeeccccccccccchhHHHH-hhhh
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRH-KKFE   65 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h-~~~~   65 (96)
                      +||.|..|++.|.....|..| ++.|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H   26 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIH   26 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTS
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHc
Confidence            478999999999999999999 5654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.13  E-value=1.3e-06  Score=34.33  Aligned_cols=24  Identities=25%  Similarity=0.585  Sum_probs=18.7

Q ss_pred             eeCC--CCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCP--HCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~--~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|.  .|++.|.....|..|+++|.
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            7777  78888888888888877764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.39  E-value=3.6e-07  Score=35.27  Aligned_cols=25  Identities=20%  Similarity=0.404  Sum_probs=22.5

Q ss_pred             CeeeccccccccccchhHHHHhhhh
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~   65 (96)
                      +||.|..|++.|.....|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4799999999999999999998876

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=5.6e-07  Score=45.62  Aligned_cols=34  Identities=29%  Similarity=0.574  Sum_probs=29.6

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +.++|.++++ |.|..|++.|.....|..|+++|.
T Consensus        16 ~~~~H~~~kp-y~C~~C~k~F~~~~~L~~H~~~Ht   49 (88)
T 1x6f_A           16 GNGPRLQNST-YQCKHCDSKLQSTAELTSHLNIHN   49 (88)
T ss_dssp             CCCSCCCCSC-EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             cccccCCCCC-CcCCCCCCEeCCHHHHHHHHHHhC
Confidence            3456888888 999999999999999999999874

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.10  E-value=1e-07  Score=38.99  Aligned_cols=24  Identities=29%  Similarity=0.772  Sum_probs=22.6

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|..|++.|...+.|..|+++|.
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~H~   26 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKTAF   26 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHc
Confidence            999999999999999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.07  E-value=2.3e-06  Score=33.56  Aligned_cols=27  Identities=30%  Similarity=0.623  Sum_probs=24.1

Q ss_pred             Ceeecc--ccccccccchhHHHHhhhhcC
Q psy12015         41 IDLKCD--VCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        41 ~~~~c~--~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      +||.|.  .|++.|.....|..|+++|.+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            478999  999999999999999998764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.88  E-value=2.6e-05  Score=37.14  Aligned_cols=50  Identities=20%  Similarity=0.349  Sum_probs=40.8

Q ss_pred             cccccccccchhHHHHhh-hhcCCC-----CceeCC--CCCCCCCCchhHHHHHhhcC
Q psy12015         46 DVCEKGYRYKTGLWRHKK-FECGQE-----PKYQCP--HCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        46 ~~c~~~f~~~~~l~~h~~-~~~~~~-----~~~~C~--~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..|++.|.....|..|+. .|.+.+     ++|.|.  .|++.+.....|..|++..|
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            358899999999999984 677655     139996  79998888899999999876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.84  E-value=2.1e-06  Score=40.46  Aligned_cols=46  Identities=4%  Similarity=0.005  Sum_probs=33.9

Q ss_pred             EeecCcccc--cccccccchhhhhhhccccccccCeeeccccccccccchhHH
Q psy12015          9 FVRKGTNTK--LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLW   59 (96)
Q Consensus         9 ~~~~~~~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~   59 (96)
                      +.++.+..+  +++.|.....|.     ++|++++||.|..|++.|....++.
T Consensus         9 H~~~k~~~C~~C~k~F~~~~~l~-----~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            9 STNRASFKCPVCSSTFTDLEANQ-----LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH-----HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             cCCCCCccCCCCCchhccHHHhH-----hhcCCCCCEECCCCCCccccCcccc
Confidence            444444433  778888776664     5799999999999999998876654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.45  E-value=3.6e-05  Score=41.29  Aligned_cols=30  Identities=20%  Similarity=0.130  Sum_probs=26.3

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhh
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKF   64 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~   64 (96)
                      ..++|++||.|..|++.|.....|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            578899999999999999999999998864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.24  E-value=0.00011  Score=35.85  Aligned_cols=46  Identities=11%  Similarity=0.060  Sum_probs=37.8

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      ++..| ..+.|..|.   .+.+++|+.|..|++.|. ..+|..|++++.+.
T Consensus        23 C~~~~-~~~~L~~H~---~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A           23 CDLEL-SILKLKEHE---DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             SCCEE-CHHHHHHHH---HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             cChHh-hHHHHHHHH---hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            55666 477888897   578999999999999877 58899999987774

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.15  E-value=7.8e-05  Score=39.99  Aligned_cols=30  Identities=20%  Similarity=0.213  Sum_probs=26.5

Q ss_pred             hhhcCCCCceeCCCCCCCCCCchhHHHHHhh
Q psy12015         63 KFECGQEPKYQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        63 ~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      .-+.|..+ |.|..|++.|.+...|..|.++
T Consensus        43 ed~tGekp-fyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGL-HRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGC-SEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcc-eEcccCcchhCCHHHHHHHHhh
Confidence            34667778 9999999999999999999886

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.03  E-value=0.0044  Score=27.41  Aligned_cols=23  Identities=22%  Similarity=0.338  Sum_probs=16.0

Q ss_pred             CeeeccccccccccchhHHHHhh
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKK   63 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~   63 (96)
                      .++.|+.|+..|...+.|..|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            35667777777777777777765

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.99  E-value=0.0065  Score=32.63  Aligned_cols=52  Identities=17%  Similarity=0.251  Sum_probs=38.7

Q ss_pred             CeeeccccccccccchhHHHHhh--hh-------------------------------cCCCCceeCCCCCCCCCCchhH
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKK--FE-------------------------------CGQEPKYQCPHCPHRSKHKAHL   87 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~--~~-------------------------------~~~~~~~~C~~c~~~f~~~~~l   87 (96)
                      +++.|..|...|.+...+..|..  .|                               .+... |.|.+|+..|.....+
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~C~~C~~~f~s~~~~  109 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRS-KCCPVCNMTFSSPVVA  109 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTT-TEETTTTEECSSHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCC-eEcCCCCCEeCCHHHH
Confidence            46788888888888777777662  11                               12234 7899999999999999


Q ss_pred             HHHHhh
Q psy12015         88 TTHMAI   93 (96)
Q Consensus        88 ~~h~r~   93 (96)
                      ..|...
T Consensus       110 ~~H~~g  115 (127)
T 1zu1_A          110 ESHYIG  115 (127)
T ss_dssp             HHHHTS
T ss_pred             HHHHCC
Confidence            988764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.93  E-value=0.0065  Score=28.63  Aligned_cols=48  Identities=10%  Similarity=0.042  Sum_probs=37.6

Q ss_pred             ccccccccchhhhhhhccccccccC------eeecc--ccccccccchhHHHHhhhh
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHI------DLKCD--VCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~------~~~c~--~c~~~f~~~~~l~~h~~~~   65 (96)
                      .+++.|.....|..|+. ..|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         8 ~C~~~f~~~~~l~~Hv~-~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLL-KDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHH-HHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHH-hhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            36688999999999983 3566554      79996  7998888888899998753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.41  E-value=0.012  Score=26.01  Aligned_cols=21  Identities=29%  Similarity=0.599  Sum_probs=19.4

Q ss_pred             eeCCCCCCCCCCchhHHHHHh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r   92 (96)
                      |.|+.|+..|....+|..|++
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            889999999999999999986

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.58  E-value=0.029  Score=23.10  Aligned_cols=24  Identities=25%  Similarity=0.563  Sum_probs=19.1

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|+.|.+.|.+...|..|....|
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            788888888888888888876655

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.80  E-value=0.2  Score=20.75  Aligned_cols=24  Identities=25%  Similarity=0.697  Sum_probs=18.7

Q ss_pred             CeeeccccccccccchhHHHHhhh
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKF   64 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~   64 (96)
                      ....|..|..+|.....+..|.+-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            456788888888888888888663

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=90.75  E-value=0.21  Score=21.95  Aligned_cols=37  Identities=22%  Similarity=0.412  Sum_probs=21.4

Q ss_pred             CeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCC
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHR   80 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~   80 (96)
                      +.|.|..||..+.....-.  .....-... |.|++||..
T Consensus         3 ~~y~C~vCGyvyd~~~Gd~--t~f~~lP~d-w~CP~Cg~~   39 (46)
T 6rxn_A            3 QKYVCNVCGYEYDPAEHDN--VPFDQLPDD-WCCPVCGVS   39 (46)
T ss_dssp             CCEEETTTCCEECGGGGTT--CCGGGSCTT-CBCTTTCCB
T ss_pred             CEEECCCCCeEEeCCcCCC--cchhhCCCC-CcCcCCCCc
Confidence            3589999998776432211  111112234 899999853

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=90.57  E-value=0.44  Score=26.44  Aligned_cols=62  Identities=13%  Similarity=0.272  Sum_probs=41.4

Q ss_pred             hhhhhhhccccccccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhh
Q psy12015         26 SSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        26 ~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      ..+..|.  .. =.-.+..|..|+..+ ....+..|.......+. -.|+.|+..+.. ..+..|..+
T Consensus        97 ~~l~~H~--~~-C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~-~~C~~C~~~~~~-~~l~~H~~~  158 (170)
T 3hcs_A           97 RHLEDHQ--AH-CEFALMDCPQCQRPF-QKFHINIHILKDCPRRQ-VSCDNCAASMAF-EDKEIHDQN  158 (170)
T ss_dssp             GGHHHHH--TT-CTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCE-EECTTTCCEEEG-GGHHHHHTT
T ss_pred             hHHHHHH--hc-CCceeeECCCCChHH-HHHHHHHHhhhhCCCCC-eECCCCCCccCH-HHHHhHHHh
Confidence            3455565  21 223567888888777 45668888876667666 789999887644 456777654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=89.36  E-value=0.32  Score=23.89  Aligned_cols=39  Identities=18%  Similarity=0.302  Sum_probs=20.8

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSK   82 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~   82 (96)
                      -|.|+.|+..+. ...+..|...-.+... |.|--|++.|.
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~-~SCIDC~~~F~   48 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCEC-LSCIDCGKDFW   48 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCE-EEETTTTEEEE
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCc-EEecccCCeeC
Confidence            456666665554 3345555443333234 66666666665

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=89.12  E-value=0.25  Score=22.41  Aligned_cols=22  Identities=14%  Similarity=0.374  Sum_probs=17.6

Q ss_pred             eeCCCCCCCCCCchhHHHHHhh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      -.|..|+..|..+..+.+|+-+
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccccccCcccccccchhhhhcc
Confidence            4788888888888888888754

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=86.64  E-value=0.35  Score=19.41  Aligned_cols=22  Identities=18%  Similarity=0.468  Sum_probs=12.7

Q ss_pred             eCCCCCCCCCCchhHHHHHhhc
Q psy12015         73 QCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        73 ~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      -|..|.+.++.-.+|..|++-.
T Consensus        11 hcrfckkkysdvknlikhire~   32 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            3555666666666666665543

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=86.48  E-value=0.43  Score=24.73  Aligned_cols=31  Identities=19%  Similarity=0.429  Sum_probs=20.7

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSK   82 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~   82 (96)
                      ..|+.|..||..|.           ....+| -.|+.|+....
T Consensus        65 v~p~~C~~CG~~F~-----------~~~~kP-srCP~CkSe~I   95 (105)
T 2gmg_A           65 IKPAQCRKCGFVFK-----------AEINIP-SRCPKCKSEWI   95 (105)
T ss_dssp             ECCCBBTTTCCBCC-----------CCSSCC-SSCSSSCCCCB
T ss_pred             EECcChhhCcCeec-----------ccCCCC-CCCcCCCCCcc
Confidence            35889999999881           112245 68888876543

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.32  E-value=0.58  Score=22.81  Aligned_cols=24  Identities=21%  Similarity=0.389  Sum_probs=16.2

Q ss_pred             eeCCCCCCCCC-------CchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSK-------HKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~-------~~~~l~~h~r~~h   95 (96)
                      -.|..|++.+.       --+.|.+|++..|
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H   59 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMH   59 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTT
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHC
Confidence            46777777765       2356788887765

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=85.26  E-value=0.71  Score=17.98  Aligned_cols=21  Identities=24%  Similarity=0.670  Sum_probs=16.9

Q ss_pred             eeCCCCCCCCCCchhHHHHHh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r   92 (96)
                      |.|++|....+....+..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            788888888888888877754

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.21  E-value=0.46  Score=23.77  Aligned_cols=21  Identities=29%  Similarity=0.559  Sum_probs=14.1

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..|-+||+.|.   .|.+|.+++|
T Consensus        22 iiClecGK~fK---~LkRHL~~~h   42 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHH   42 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTT
T ss_pred             eEecccchhhH---HHHHHHHHcc
Confidence            56777777766   3557777654

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=83.53  E-value=0.72  Score=21.94  Aligned_cols=47  Identities=17%  Similarity=0.429  Sum_probs=23.0

Q ss_pred             eeec-cccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHH
Q psy12015         42 DLKC-DVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHM   91 (96)
Q Consensus        42 ~~~c-~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~   91 (96)
                      +..| ..|+..+. ..++..|.......++ ..|..|+..+.. ..+..|.
T Consensus        16 ~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~-v~C~~C~~~~~~-~~l~~H~   63 (76)
T 2yuc_A           16 VIPCPNRCPMKLS-RRDLPAHLQHDCPKRR-LKCEFCGCDFSG-EAYESHE   63 (76)
T ss_dssp             CCBCTTCCSCBCC-SSSSTTTTTTSCTTSC-CCCSSSCCCCCH-HHHHHTT
T ss_pred             ccCCCccccHHhh-HhHHHhhCHhhCCCcc-eECCCCCCccCH-HHHHHHH
Confidence            4455 45655443 3345555543334344 566666665443 3344443

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=82.84  E-value=0.6  Score=26.99  Aligned_cols=26  Identities=23%  Similarity=0.507  Sum_probs=19.3

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      ...|.|..||..+.             |..| +.|+.||.
T Consensus       169 ~~~~~C~~CG~i~~-------------g~~p-~~CP~C~~  194 (202)
T 1yuz_A          169 DKFHLCPICGYIHK-------------GEDF-EKCPICFR  194 (202)
T ss_dssp             CCEEECSSSCCEEE-------------SSCC-SBCTTTCC
T ss_pred             CcEEEECCCCCEEc-------------CcCC-CCCCCCCC
Confidence            34699999998653             2245 89999985

>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}

Probab=81.37  E-value=0.67  Score=22.88  Aligned_cols=39  Identities=18%  Similarity=0.429  Sum_probs=21.8

Q ss_pred             cCeeeccccccccccchhHHHH-----hhhhcCCCCceeCCCCCC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRH-----KKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h-----~~~~~~~~~~~~C~~c~~   79 (96)
                      .+.|.|..|+..+.-...-...     .....-... |.|++|+.
T Consensus        25 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPdd-W~CPvCga   68 (81)
T 2kn9_A           25 YKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDD-WSCPDCGA   68 (81)
T ss_dssp             CCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTT-CCCTTTCC
T ss_pred             cceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCC-CcCCCCCC
Confidence            3469999999887643211110     011111233 89999985

>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...

Probab=80.07  E-value=1  Score=20.41  Aligned_cols=39  Identities=23%  Similarity=0.432  Sum_probs=21.4

Q ss_pred             CeeeccccccccccchhHHHH-----hhhhcCCCCceeCCCCCCC
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRH-----KKFECGQEPKYQCPHCPHR   80 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h-----~~~~~~~~~~~~C~~c~~~   80 (96)
                      +.|.|..|+..+.-...-...     .....-... |.|+.||..
T Consensus         2 ~~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~d-w~CP~Cg~~   45 (54)
T 4rxn_A            2 KKYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDD-WVCPLCGVG   45 (54)
T ss_dssp             CCEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTT-CBCTTTCCB
T ss_pred             CceECCCCCeEECCCcCCcccCcCCCCChhHCCCC-CcCcCCCCc
Confidence            358899999877643221111     011111234 899999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	96
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.77
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.39
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.38
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.36
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.35
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.33
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.33
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.32
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.3
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.3
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.23
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.22
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.21
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.21
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.18
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.11
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.11
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.1
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.08
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.07
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.02
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.98
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.97
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.88
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.84
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.76
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.76
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.71
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.69
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.68
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.66
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.64
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.62
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.61
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.61
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.6
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.59
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.51
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.45
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.43
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.38
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.33
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.21
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.09
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.08
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.04
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.96
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.93
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.91
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.87
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.75
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.74
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.74
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.72
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.64
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.59
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.55
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.54
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.5
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.48
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.41
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.36
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.34
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.33
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.28
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.26
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.17
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.13
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.12
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.07
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.01
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.82
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.77
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.69
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.66
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.65
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.65
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.59
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.41
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.35
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.34
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.23
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.22
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.15
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.99
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.81
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.83
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.82
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.61
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.31
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.55
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	93.07
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.7
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.55
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.16
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.44
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.96
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	89.13
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	87.95
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	87.21
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	86.38
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	85.79
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	85.41
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	83.29
d1fu9a_	36	U-shaped transcription factor, different fingers {	81.46
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	81.07
d1s24a_	56	Two-iron rubredoxin {Pseudomonas oleovorans [TaxId	80.75

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.9e-19  Score=83.08  Aligned_cols=53  Identities=34%  Similarity=0.583  Sum_probs=50.8

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      |+||.| .|++.|.....|..|+++|+|++| |.|..||+.|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekp-y~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccC-CcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 599999999999999999999998 99999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.1e-13  Score=56.83  Aligned_cols=33  Identities=18%  Similarity=0.391  Sum_probs=25.0

Q ss_pred             cccccCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         36 VLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        36 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      +|+|++||.|..|++.|...++|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            467777777877877777777777777777763

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=7.7e-14  Score=59.43  Aligned_cols=34  Identities=24%  Similarity=0.453  Sum_probs=25.8

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      .+|++++||.|..|++.|...++|..|+++|+|+
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6777777777777777777777777777777763

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.3e-13  Score=63.02  Aligned_cols=46  Identities=22%  Similarity=0.316  Sum_probs=44.1

Q ss_pred             cccccccchhhhhhhccccccccCeeeccccccccccchhHHHHhhhh
Q psy12015         18 LDFGVIRNSSVDKSLNTNVLTVHIDLKCDVCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        18 ~~~~~~~~~~~~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~   65 (96)
                      +++.|.....|..|+  ++|+|++||.|..|++.|.....|..|+++|
T Consensus         8 Cgk~F~~~~~l~~H~--~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           8 CGKSFTHKSQRDRHM--SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             TSCEESSHHHHHHHH--HHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCeECCHHHhHHHh--hccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            889999999999999  8999999999999999999999999999875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=2.9e-13  Score=57.63  Aligned_cols=37  Identities=27%  Similarity=0.499  Sum_probs=33.7

Q ss_pred             ccCeeeccccccccccchhHHHHhh-hhcCCCCceeCCC
Q psy12015         39 VHIDLKCDVCEKGYRYKTGLWRHKK-FECGQEPKYQCPH   76 (96)
Q Consensus        39 ~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~~C~~   76 (96)
                      .++||.|..|++.|....+|..|++ +|+|++| |+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekp-y~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcC-cCCcC
Confidence            4789999999999999999999976 7999999 99974

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=2.6e-13  Score=57.37  Aligned_cols=32  Identities=19%  Similarity=0.272  Sum_probs=19.0

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhc
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      ++|+||+||.|..|++.|...++|..|+++|.
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            55666666666666666666666666655554

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.4e-13  Score=56.32  Aligned_cols=33  Identities=27%  Similarity=0.243  Sum_probs=23.2

Q ss_pred             ccccccCeeeccccccccccchhHHHHhhhhcC
Q psy12015         35 NVLTVHIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        35 ~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ++|+||+||.|..|++.|...++|..|+++|.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            356777777777777777777777777776655

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=4.1e-13  Score=56.76  Aligned_cols=34  Identities=26%  Similarity=0.558  Sum_probs=31.8

Q ss_pred             HhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         61 HKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        61 h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|+|+|++| |.|+.|++.|.+.+.|.+|+++|-
T Consensus         2 h~R~HTgeKP-y~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKP-FQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSS-BCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccC-eEeCCCCCEecCHHHHHHHHhcCc
Confidence            6789999999 999999999999999999999873

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.9e-13  Score=55.91  Aligned_cols=32  Identities=31%  Similarity=0.714  Sum_probs=30.2

Q ss_pred             hhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         63 KFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        63 ~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+|+|++| |+|..||+.|...+.|..|+++|+
T Consensus         1 R~HTgekP-y~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKP-YACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCC-EECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCC-EECCCCCCCcCCHhHHHHhCcccC
Confidence            57899998 999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2.8e-13  Score=57.61  Aligned_cols=35  Identities=20%  Similarity=0.420  Sum_probs=32.9

Q ss_pred             HHhhhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         60 RHKKFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        60 ~h~~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +|+++|++++| |.|..||+.|...++|.+|+++|.
T Consensus         2 rH~~~Ht~ekp-y~C~~CgK~F~~~s~L~~H~r~Ht   36 (38)
T d2cota2           2 RSEWQQRERRR-YKCDECGKSFSHSSDLSKHRRTHT   36 (38)
T ss_dssp             CCCSCCCCSCS-SBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             ccCcccCCCCC-EecCCCCceeeCHHHHHHhCccCC
Confidence            57889999999 999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.3e-12  Score=54.02  Aligned_cols=29  Identities=10%  Similarity=0.178  Sum_probs=17.2

Q ss_pred             cccccCeeeccccccccccchhHHHHhhh
Q psy12015         36 VLTVHIDLKCDVCEKGYRYKTGLWRHKKF   64 (96)
Q Consensus        36 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~   64 (96)
                      +|+||+||.|..|++.|....+|..|++.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccc
Confidence            45566666666666666666666666543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=3.7e-12  Score=52.87  Aligned_cols=31  Identities=19%  Similarity=0.340  Sum_probs=19.5

Q ss_pred             ccccCeeeccccccccccchhHHHHhhhhcC
Q psy12015         37 LTVHIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        37 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ++||+||.|..|++.|....+|..|+++|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            4566666666666666666666666666554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=3.8e-12  Score=52.17  Aligned_cols=31  Identities=23%  Similarity=0.582  Sum_probs=29.0

Q ss_pred             hhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         64 FECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        64 ~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +|+|++| |+|..||+.|...+.|..|+++|.
T Consensus         1 IHTgekp-y~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           1 IHSGEKP-YGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTTCCC-EECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CcCCCCC-eeCCCCCCEeCchHHhHhhccccC
Confidence            4789888 999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=4.2e-12  Score=52.72  Aligned_cols=30  Identities=23%  Similarity=0.571  Sum_probs=28.0

Q ss_pred             hcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         65 ECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        65 ~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ++|++| |+|.+|++.|.+.++|.+|+++|.
T Consensus         2 ~TGekP-y~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRP-FVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSC-EECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCcc-ccCCCCCCcccChHHHHHHccccC
Confidence            578888 999999999999999999999985

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=4.1e-12  Score=53.21  Aligned_cols=32  Identities=28%  Similarity=0.665  Sum_probs=29.2

Q ss_pred             hhhcCCCCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         63 KFECGQEPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        63 ~~~~~~~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+|+|++| |.|+.|++.|.+.++|.+|++.+|
T Consensus         1 R~HTgekP-~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKP-YECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCS-EECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCC-EeCCCCcccccchHHHHHHccccc
Confidence            47899999 999999999999999999987765

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=5.2e-12  Score=49.86  Aligned_cols=24  Identities=33%  Similarity=0.646  Sum_probs=13.6

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+|..|++.|.+.+.|.+|+++|.
T Consensus         4 y~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           4 FQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHH
T ss_pred             ccCCCCcCEecccccccccCCCcc
Confidence            555555555555555555555553

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.2e-11  Score=47.70  Aligned_cols=23  Identities=26%  Similarity=0.590  Sum_probs=17.2

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      |+|..||+.|...+.|.+|+|+|
T Consensus         3 y~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           3 YKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHH
T ss_pred             ccCCCCcCeeccCcccccCccCC
Confidence            77777777777777777777776

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.11  E-value=2.7e-11  Score=53.56  Aligned_cols=41  Identities=17%  Similarity=0.327  Sum_probs=32.9

Q ss_pred             hhhhhhhccccccccCeeeccc--cccccccchhHHHHhhhhcCCC
Q psy12015         26 SSVDKSLNTNVLTVHIDLKCDV--CEKGYRYKTGLWRHKKFECGQE   69 (96)
Q Consensus        26 ~~~~~h~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~   69 (96)
                      +.++.|+   .|++++||.|..  |++.|...+.|..|+++|+|++
T Consensus         5 ~~l~~h~---~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYV---KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSC---EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchh---hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3456665   488899999976  9999999999999999988864

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=1.8e-11  Score=48.24  Aligned_cols=28  Identities=18%  Similarity=0.498  Sum_probs=26.8

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      |+||.|..|++.|...++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=4e-11  Score=47.66  Aligned_cols=27  Identities=22%  Similarity=0.405  Sum_probs=15.1

Q ss_pred             eeeccccccccccchhHHHHhhhhcCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      ||.|..|++.|...+.|..|+++|+|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            555555555555555555555555553

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.07  E-value=3.2e-11  Score=48.00  Aligned_cols=27  Identities=22%  Similarity=0.577  Sum_probs=15.8

Q ss_pred             eeeccccccccccchhHHHHhhhhcCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      ||.|..|++.|...+.|..|+++|+|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            555555666665555566665555553

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=6.3e-11  Score=45.66  Aligned_cols=26  Identities=27%  Similarity=0.591  Sum_probs=24.5

Q ss_pred             CeeeccccccccccchhHHHHhhhhc
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      +||+|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999884

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.6e-10  Score=45.87  Aligned_cols=26  Identities=31%  Similarity=0.852  Sum_probs=24.2

Q ss_pred             CCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +| |.|..||+.|.+.+.|.+|+++|.
T Consensus         1 Kp-y~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           1 KK-FACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CC-SCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CC-EECCcCCCeecchHHhhhhcCccC
Confidence            35 999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.97  E-value=1.7e-10  Score=45.80  Aligned_cols=26  Identities=19%  Similarity=0.482  Sum_probs=24.3

Q ss_pred             CCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +| |.|+.|++.|...+.|.+|+++|.
T Consensus         1 kp-~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           1 RS-FVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CC-BCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             Cc-CCCCCCCCCCCCchHcccccCccc
Confidence            35 999999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=4.9e-10  Score=46.62  Aligned_cols=32  Identities=28%  Similarity=0.683  Sum_probs=27.9

Q ss_pred             eeccc--cccccccchhHHHHhhhhcCCCCceeCC
Q psy12015         43 LKCDV--CEKGYRYKTGLWRHKKFECGQEPKYQCP   75 (96)
Q Consensus        43 ~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~~C~   75 (96)
                      |.|..  |++.|.....|..|+++|+|++| |.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekp-y~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCC-EeCC
Confidence            67765  99999999999999999999888 9886

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.84  E-value=4e-10  Score=49.68  Aligned_cols=37  Identities=16%  Similarity=0.401  Sum_probs=32.2

Q ss_pred             hHHHHhhhhcCCCCceeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         57 GLWRHKKFECGQEPKYQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        57 ~l~~h~~~~~~~~~~~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      .+..|+. +.+++| |.|..  |++.|...++|..|+++|.
T Consensus         6 ~l~~h~~-h~gekp-y~C~~~~C~k~F~~~~~L~~H~r~Ht   44 (47)
T d1ncsa_           6 SIDKYVK-EMPDKT-FECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             SGGGSCE-EETTTE-EECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             hhcchhh-ccCCCC-eECCcCCCCccccCchHHHhhccccc
Confidence            4556664 899888 99987  9999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2.1e-09  Score=42.81  Aligned_cols=24  Identities=21%  Similarity=0.459  Sum_probs=13.4

Q ss_pred             eeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|+.  |++.|...+.|.+|+|+|.
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           3 HKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             eeCCCCCCCceECChhHhhhhcCcCc
Confidence            55544  5555555555555555553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2.2e-09  Score=42.80  Aligned_cols=26  Identities=23%  Similarity=0.611  Sum_probs=12.5

Q ss_pred             eeeccc--cccccccchhHHHHhhhhcC
Q psy12015         42 DLKCDV--CEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~~--c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ||.|..  |++.|...++|..|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            444433  44555544555555444444

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=5.2e-09  Score=41.63  Aligned_cols=27  Identities=30%  Similarity=0.497  Sum_probs=25.3

Q ss_pred             Ceeeccc--cccccccchhHHHHhhhhcC
Q psy12015         41 IDLKCDV--CEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        41 ~~~~c~~--c~~~f~~~~~l~~h~~~~~~   67 (96)
                      +||.|..  |++.|...++|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            5899988  99999999999999999987

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3.9e-09  Score=41.26  Aligned_cols=24  Identities=25%  Similarity=0.711  Sum_probs=18.5

Q ss_pred             eeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|+.  ||+.|.+.++|.+|+++|+
T Consensus         3 f~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           3 YVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             cCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            77765  8888888888888887764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.68  E-value=1e-08  Score=41.36  Aligned_cols=26  Identities=27%  Similarity=0.609  Sum_probs=19.7

Q ss_pred             CCceeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      +| |.|..  |++.|.+.+.|.+|+++|.
T Consensus         2 rP-~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RP-YSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CS-BCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cC-eECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            45 77866  8888888888888887774

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=7e-09  Score=41.60  Aligned_cols=27  Identities=30%  Similarity=0.612  Sum_probs=14.4

Q ss_pred             eeecc--ccccccccchhHHHHhhhhcCC
Q psy12015         42 DLKCD--VCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        42 ~~~c~--~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      ||.|+  .|++.|...++|..|+++|+|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            45553  3555555555555555555553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=6.4e-09  Score=41.40  Aligned_cols=26  Identities=35%  Similarity=0.714  Sum_probs=23.5

Q ss_pred             CCceeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      +| |.|+.  |++.|...+.|.+|+|+|.
T Consensus         1 kp-~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KP-FQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CC-EECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CC-ccCCCCCCCceECcHHHcCccccccC
Confidence            35 99976  9999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.62  E-value=7.9e-09  Score=40.76  Aligned_cols=24  Identities=42%  Similarity=0.834  Sum_probs=15.7

Q ss_pred             eeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|..  |++.|.+.+.|.+|+|+|.
T Consensus         3 ~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           3 YACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             eECCCCCCCcEECchhHhhhhcCccC
Confidence            66654  6666666666666666654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.3e-08  Score=42.92  Aligned_cols=27  Identities=26%  Similarity=0.645  Sum_probs=23.8

Q ss_pred             CCCceeCCCCCCCCCCchhHHHHHh-hcC
Q psy12015         68 QEPKYQCPHCPHRSKHKAHLTTHMA-IKH   95 (96)
Q Consensus        68 ~~~~~~C~~c~~~f~~~~~l~~h~r-~~h   95 (96)
                      ++| |.|..||+.|...++|.+|++ +|.
T Consensus         3 ~Kp-y~C~~Cgk~F~~~~~L~~H~r~~Ht   30 (39)
T d2epsa1           3 GKP-YICQSCGKGFSRPDHLNGHIKQVHT   30 (39)
T ss_dssp             SCC-EECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCC-ccCCCCCCCcCChHHhhccCcCccC
Confidence            467 999999999999999999986 564

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.61  E-value=1.7e-08  Score=40.71  Aligned_cols=28  Identities=32%  Similarity=0.538  Sum_probs=26.0

Q ss_pred             cCeeeccc--cccccccchhHHHHhhhhcC
Q psy12015         40 HIDLKCDV--CEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        40 ~~~~~c~~--c~~~f~~~~~l~~h~~~~~~   67 (96)
                      |+||.|..  |++.|...++|..|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            68999987  99999999999999999976

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.60  E-value=8.5e-09  Score=40.65  Aligned_cols=27  Identities=26%  Similarity=0.615  Sum_probs=25.0

Q ss_pred             Ceeeccc--cccccccchhHHHHhhhhcC
Q psy12015         41 IDLKCDV--CEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        41 ~~~~c~~--c~~~f~~~~~l~~h~~~~~~   67 (96)
                      +||.|..  |++.|...++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5899976  99999999999999999986

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=2.1e-08  Score=38.03  Aligned_cols=26  Identities=19%  Similarity=0.494  Sum_probs=20.9

Q ss_pred             CCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +| |.|.+||+.|..+....+|.++|.
T Consensus         2 kP-f~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KP-FACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CC-EECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CC-cccchhhhhhhcchhhhhhhhhcc
Confidence            45 888888888888888888888763

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.3e-08  Score=39.55  Aligned_cols=26  Identities=23%  Similarity=0.543  Sum_probs=23.2

Q ss_pred             CCceeCC--CCCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCP--HCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~--~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +| |.|+  .|++.|...++|.+|+++|.
T Consensus         1 kp-f~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           1 RP-FMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CC-CBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             Cc-CCCcCCCCCcCcCChhHhhhhcCccc
Confidence            35 9995  69999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=3.1e-08  Score=38.63  Aligned_cols=26  Identities=23%  Similarity=0.350  Sum_probs=23.5

Q ss_pred             Ceeeccc--cccccccchhHHHHhhhhc
Q psy12015         41 IDLKCDV--CEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        41 ~~~~c~~--c~~~f~~~~~l~~h~~~~~   66 (96)
                      +||.|+.  |++.|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899977  9999999999999999874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=6.1e-08  Score=35.63  Aligned_cols=24  Identities=29%  Similarity=0.466  Sum_probs=17.7

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      .+|+.|++.|+....|..|+|.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            567777777777777777777765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=2e-08  Score=41.62  Aligned_cols=28  Identities=7%  Similarity=0.116  Sum_probs=26.1

Q ss_pred             ccccccccchhhhhhhccccccccCeeecc
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVHIDLKCD   46 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~c~   46 (96)
                      .+++.|...+.|..|+  ++|+|++||.|+
T Consensus         8 ~C~k~F~~~~~L~~H~--r~Htgekpy~C~   35 (36)
T d2dlka2           8 ACGKSFNFKKHLKEHM--KLHSDTRDYICE   35 (36)
T ss_dssp             TTCCEESSHHHHHHHH--HHHHTSCCCSCC
T ss_pred             CCCCeeCChhHhcccc--CeeCCCCCEeCC
Confidence            4789999999999999  999999999996

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.38  E-value=1.2e-07  Score=35.94  Aligned_cols=27  Identities=22%  Similarity=0.507  Sum_probs=24.6

Q ss_pred             cCeeeccccccccccchhHHHHhhhhc
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      |+||.|+.|++.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999988874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.4e-07  Score=34.63  Aligned_cols=26  Identities=35%  Similarity=0.624  Sum_probs=23.4

Q ss_pred             eeeccccccccccchhHHHHhhhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      |+.|..|++.|+....|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999998875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=4.3e-07  Score=34.86  Aligned_cols=29  Identities=21%  Similarity=0.387  Sum_probs=19.9

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      |+||.|..|...|.....+.-|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46777777777777777777777766663

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.09  E-value=1.1e-06  Score=31.89  Aligned_cols=23  Identities=26%  Similarity=0.602  Sum_probs=19.1

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      |+|..|.+.|...++|.+|+|.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            56888888888888888888876

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.2e-06  Score=32.85  Aligned_cols=24  Identities=29%  Similarity=0.746  Sum_probs=13.7

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+|+.|.....+++.|..|.|.|+
T Consensus         4 fkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           4 FKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCC
T ss_pred             ceeeecccccCCchheEEeeeccc
Confidence            555555555555555555555553

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=9.1e-07  Score=33.92  Aligned_cols=26  Identities=35%  Similarity=0.765  Sum_probs=23.6

Q ss_pred             CCceeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         69 EPKYQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        69 ~~~~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +| |+|++|+..|....-+.-|.|.|.
T Consensus         2 kp-~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           2 KP-YSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CS-SEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CC-cccchHHHHhhccccceEeeeccc
Confidence            56 999999999999999999999874

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=3.5e-06  Score=31.58  Aligned_cols=29  Identities=24%  Similarity=0.450  Sum_probs=26.1

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      |+||+|+.|...-..++.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999888899999999999874

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=3.6e-06  Score=31.28  Aligned_cols=25  Identities=28%  Similarity=0.749  Sum_probs=21.4

Q ss_pred             CCceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         69 EPKYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        69 ~~~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      +| |+|..|...-...+.|+.|+|+|
T Consensus         2 kp-~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KP-YKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CS-EECSSSCCEESSHHHHHHHHHHS
T ss_pred             CC-cccccccchhcchhhHhhhhhcc
Confidence            45 89999998888888999999887

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=4.9e-06  Score=31.00  Aligned_cols=24  Identities=17%  Similarity=0.379  Sum_probs=19.3

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..|..||++|..++.|.+|+-.|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTS
T ss_pred             chHHHHhHHHHHHHHHHHHhhccc
Confidence            578888888888888888887765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=6.4e-06  Score=30.68  Aligned_cols=27  Identities=26%  Similarity=0.458  Sum_probs=23.7

Q ss_pred             eeeccccccccccchhHHHHhhhhcCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      .+.|..||+.|..++.|.+|+..|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            357999999999999999999998873

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=5.9e-06  Score=32.32  Aligned_cols=31  Identities=35%  Similarity=0.685  Sum_probs=25.4

Q ss_pred             CeeeccccccccccchhHHHHhhhhcCCCCce
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKY   72 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   72 (96)
                      +...|..||+.|...-.|.+|...|++++| |
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekp-y   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKP-Y   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCC-C
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCC-C
Confidence            346788899888888888888888888877 6

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1e-05  Score=33.33  Aligned_cols=25  Identities=28%  Similarity=0.739  Sum_probs=18.9

Q ss_pred             CCCCceeCCCCCCCCCCchhHHHHHh
Q psy12015         67 GQEPKYQCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        67 ~~~~~~~C~~c~~~f~~~~~l~~h~r   92 (96)
                      |.+| |+|..|++.|-.+..+.+|..
T Consensus         2 GiKP-YeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKP-YECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCC-EECSSSCCEESCHHHHHHHHH
T ss_pred             CCCc-eeccchhhhhhhHHHHHHhhh
Confidence            4566 888888888888888877754

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.74  E-value=1.1e-05  Score=32.94  Aligned_cols=23  Identities=26%  Similarity=0.657  Sum_probs=14.3

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      |+|..|++.|.+..+|--|++.|
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTT
T ss_pred             cCCCCCCCccCCcccccchHhhh
Confidence            66666666666666666666554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.74  E-value=1.4e-05  Score=32.62  Aligned_cols=30  Identities=17%  Similarity=0.388  Sum_probs=26.5

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCCC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQE   69 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   69 (96)
                      .+.|.|..|++.|.+...|..|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            457999999999999999999999887654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.7e-05  Score=30.27  Aligned_cols=24  Identities=29%  Similarity=0.638  Sum_probs=18.3

Q ss_pred             eeCCC--CCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPH--CPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~--c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|+.  |++.+..+++|..|++++|
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhC
Confidence            77765  7778888888888887766

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=2e-05  Score=29.61  Aligned_cols=24  Identities=29%  Similarity=0.634  Sum_probs=21.8

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|+.||.....++.|..|+|+|+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             ccccccCcccCCHHHHHHHHHHhc
Confidence            789999999999999999999886

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=2.9e-05  Score=29.31  Aligned_cols=24  Identities=46%  Similarity=0.876  Sum_probs=19.5

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+|..|......+++|..|+.+.|
T Consensus         3 y~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           3 YQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             ccccccccccccchhhhhhhhccc
Confidence            888888888888888888887765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.55  E-value=2.5e-05  Score=29.24  Aligned_cols=23  Identities=35%  Similarity=0.846  Sum_probs=15.3

Q ss_pred             eeCCC--CCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPH--CPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~--c~~~f~~~~~l~~h~r~~   94 (96)
                      |.|+.  |++.|+.++-|.+|.++|
T Consensus         4 y~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           4 YECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             ccCCccCccccccCHHHHhhhhhcc
Confidence            66653  677777777777776654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.54  E-value=2.9e-05  Score=29.86  Aligned_cols=24  Identities=21%  Similarity=0.391  Sum_probs=19.5

Q ss_pred             ceeCCCCCCCCCCchhHHHHHhhc
Q psy12015         71 KYQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        71 ~~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      ||.|.+|++.|..+.-+-+|++--
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKl   24 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKI   24 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTT
T ss_pred             CcccccccchhhHHHHHHHHHHHH
Confidence            488889999999888888887653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.50  E-value=3.3e-05  Score=27.84  Aligned_cols=24  Identities=33%  Similarity=0.746  Sum_probs=21.3

Q ss_pred             eeccccccccccchhHHHHhhhhc
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      |.|..|+++|...+.+.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            579999999999999999999763

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=3.5e-05  Score=31.69  Aligned_cols=26  Identities=23%  Similarity=0.601  Sum_probs=22.8

Q ss_pred             cccCeeeccccccccccchhHHHHhh
Q psy12015         38 TVHIDLKCDVCEKGYRYKTGLWRHKK   63 (96)
Q Consensus        38 ~~~~~~~c~~c~~~f~~~~~l~~h~~   63 (96)
                      +|-+||+|..|++.|-+...+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46789999999999999998888864

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=5.7e-05  Score=28.74  Aligned_cols=27  Identities=30%  Similarity=0.529  Sum_probs=22.9

Q ss_pred             Ceeeccc--cccccccchhHHHHhhhhcC
Q psy12015         41 IDLKCDV--CEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        41 ~~~~c~~--c~~~f~~~~~l~~h~~~~~~   67 (96)
                      +||.|..  |++++...++|..|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5889976  99999999999999987544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.36  E-value=7.1e-05  Score=27.97  Aligned_cols=25  Identities=28%  Similarity=0.642  Sum_probs=21.7

Q ss_pred             Ceeecc--ccccccccchhHHHHhhhh
Q psy12015         41 IDLKCD--VCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        41 ~~~~c~--~c~~~f~~~~~l~~h~~~~   65 (96)
                      .||.|.  .|++.|+..+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            588986  5999999999999998876

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=7.8e-05  Score=27.57  Aligned_cols=26  Identities=19%  Similarity=0.419  Sum_probs=23.7

Q ss_pred             CeeeccccccccccchhHHHHhhhhc
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      +|++|..|...-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            69999999999999999999999874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=7.5e-05  Score=28.67  Aligned_cols=21  Identities=19%  Similarity=0.550  Sum_probs=10.5

Q ss_pred             eeeccc--cccccccchhHHHHh
Q psy12015         42 DLKCDV--CEKGYRYKTGLWRHK   62 (96)
Q Consensus        42 ~~~c~~--c~~~f~~~~~l~~h~   62 (96)
                      ||.|..  |.+.|+..++...|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            445543  555555555555554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=7.7e-05  Score=28.65  Aligned_cols=23  Identities=22%  Similarity=0.554  Sum_probs=20.3

Q ss_pred             eeCCC--CCCCCCCchhHHHHH-hhc
Q psy12015         72 YQCPH--CPHRSKHKAHLTTHM-AIK   94 (96)
Q Consensus        72 ~~C~~--c~~~f~~~~~l~~h~-r~~   94 (96)
                      |.|..  |.++|+..+.-..|+ |+|
T Consensus         3 Y~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           3 YMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             EECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             ccccCCChhhhhcchhhhhhhccccc
Confidence            99976  999999999999997 665

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.00015  Score=27.28  Aligned_cols=27  Identities=22%  Similarity=0.294  Sum_probs=23.9

Q ss_pred             CeeeccccccccccchhHHHHhhhhcC
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      +||.|+.|.......++|..|.++..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            589999999999999999999987555

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00012  Score=27.44  Aligned_cols=23  Identities=39%  Similarity=0.693  Sum_probs=17.1

Q ss_pred             ceeCCCCCCCCCCchhHHHHHhh
Q psy12015         71 KYQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        71 ~~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      ||.|..|...|.+..+|..|+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            37777777777777777777764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00019  Score=26.86  Aligned_cols=24  Identities=25%  Similarity=0.523  Sum_probs=21.8

Q ss_pred             eeeccccccccccchhHHHHhhhh
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~   65 (96)
                      ||.|..|...|....+|..|+++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            789999999999999999999864

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.0002  Score=26.76  Aligned_cols=26  Identities=15%  Similarity=0.254  Sum_probs=22.9

Q ss_pred             eeccccccccccchhHHHHhhhhcCC
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      |.|..|+....-++-|..|.++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            67999999998899999999999875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00014  Score=28.26  Aligned_cols=24  Identities=21%  Similarity=0.339  Sum_probs=21.7

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      ..|..||+.|.....|++|.-.|.
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs   29 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHS   29 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccC
Confidence            789999999999999999987763

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.01  E-value=0.00021  Score=25.64  Aligned_cols=21  Identities=29%  Similarity=0.580  Sum_probs=12.7

Q ss_pred             eeeccccccccccchhHHHHh
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHK   62 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~   62 (96)
                      ||.|..|...|-...++..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666655554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.82  E-value=0.00042  Score=25.44  Aligned_cols=22  Identities=32%  Similarity=0.652  Sum_probs=16.8

Q ss_pred             ceeCCCCCCCCCCchhHHHHHh
Q psy12015         71 KYQCPHCPHRSKHKAHLTTHMA   92 (96)
Q Consensus        71 ~~~C~~c~~~f~~~~~l~~h~r   92 (96)
                      ||+|..||+.+-...+|-.|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            3888888888888888776654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.00068  Score=25.25  Aligned_cols=28  Identities=25%  Similarity=0.507  Sum_probs=19.2

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      |+-|.|..|...|.....|..|+-.|+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            3456777777777777777777766665

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.69  E-value=0.00072  Score=24.59  Aligned_cols=25  Identities=28%  Similarity=0.497  Sum_probs=16.2

Q ss_pred             eccccccccccchhHHHHhhhhcCC
Q psy12015         44 KCDVCEKGYRYKTGLWRHKKFECGQ   68 (96)
Q Consensus        44 ~c~~c~~~f~~~~~l~~h~~~~~~~   68 (96)
                      .|+.|.+.|.+.-.|..|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3666666666666666666666664

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.0005  Score=29.16  Aligned_cols=23  Identities=22%  Similarity=0.332  Sum_probs=19.3

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      |.|..|||.|.....|.+|...|
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeccccccccCCHHHHhHhHHhc
Confidence            78999999999998888887654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.65  E-value=0.00062  Score=26.03  Aligned_cols=26  Identities=23%  Similarity=0.657  Sum_probs=21.6

Q ss_pred             eeeccccccccccchhHHHHhh-hhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKK-FECG   67 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~-~~~~   67 (96)
                      ||.|..|++.|....-+.+|+. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7899999999999988888876 3544

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.65  E-value=0.0007  Score=24.32  Aligned_cols=24  Identities=38%  Similarity=0.809  Sum_probs=18.3

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|+.|-+.|.+..++..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888888888888877776644

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.00089  Score=27.00  Aligned_cols=25  Identities=32%  Similarity=0.774  Sum_probs=15.5

Q ss_pred             CCceeC--CCCCCCCCCchhHHHHHhhc
Q psy12015         69 EPKYQC--PHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        69 ~~~~~C--~~c~~~f~~~~~l~~h~r~~   94 (96)
                      +| |.|  +.|+..|.+...|..|..-|
T Consensus         5 kP-F~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           5 KP-FLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CC-EECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             Cc-eecCCCCccccccchHHHHHhhhhh
Confidence            44 777  34666777777666665543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.41  E-value=0.0015  Score=24.34  Aligned_cols=20  Identities=40%  Similarity=0.627  Sum_probs=10.1

Q ss_pred             cccccccchhHHHHhhhhcC
Q psy12015         48 CEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        48 c~~~f~~~~~l~~h~~~~~~   67 (96)
                      |.+.|.....|.+|..+|+|
T Consensus        10 c~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHT
T ss_pred             ccccchhhhhhhhhhccccC
Confidence            55555555555555544444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0011  Score=24.82  Aligned_cols=22  Identities=27%  Similarity=0.720  Sum_probs=14.7

Q ss_pred             eeCCCCCCCCCCchhHHHHHhh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      |+|..|...-.++++|..|.+.
T Consensus         3 FkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           3 FKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             cccceecccccCcchHHHHHHH
Confidence            6777776666666777766654

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.001  Score=25.97  Aligned_cols=22  Identities=14%  Similarity=0.483  Sum_probs=19.1

Q ss_pred             eeCCCCCCCCCCchhHHHHHhh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      |.|..||+.|..+..+.+|...
T Consensus         5 fvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHhhh
Confidence            8999999999999999888653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0019  Score=23.71  Aligned_cols=24  Identities=33%  Similarity=0.826  Sum_probs=18.9

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |+|+.|+......+.|..|.+.-|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            788888888888888888877643

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.0019  Score=24.10  Aligned_cols=27  Identities=26%  Similarity=0.407  Sum_probs=22.3

Q ss_pred             CeeeccccccccccchhHHHHhhhhcC
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      +||.|..|.......++|..|.+--.+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            489999999888899999999875333

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.002  Score=25.95  Aligned_cols=27  Identities=19%  Similarity=0.271  Sum_probs=22.8

Q ss_pred             cCeeec--cccccccccchhHHHHhhhhc
Q psy12015         40 HIDLKC--DVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        40 ~~~~~c--~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      ++||.|  ..|+..|..+..|..|..-|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            789999  569999999999998877553

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.003  Score=23.24  Aligned_cols=23  Identities=30%  Similarity=0.531  Sum_probs=13.8

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      -+|+.|....++..+|..|.|+|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            45666666666666666666654

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0049  Score=22.63  Aligned_cols=26  Identities=27%  Similarity=0.555  Sum_probs=21.9

Q ss_pred             eeeccccccccccchhHHHHhhhhcC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      |-+|..|..+.++...|..|.|+|..
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            45799999999999999999988754

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.0031  Score=24.76  Aligned_cols=22  Identities=5%  Similarity=-0.274  Sum_probs=16.2

Q ss_pred             ccccccccchhhhhhhcccccccc
Q psy12015         17 KLDFGVIRNSSVDKSLNTNVLTVH   40 (96)
Q Consensus        17 ~~~~~~~~~~~~~~h~~~~~~~~~   40 (96)
                      ..+++|.....|..|+  +.|+||
T Consensus        12 R~~~pf~a~YkLv~H~--R~HTgE   33 (33)
T d2glia2          12 RELRPFKAQYMLVVHM--RRHTGE   33 (33)
T ss_dssp             TTTCCCSSHHHHHHHT--HHHHCC
T ss_pred             CCCCcchhHHHHHHHH--hhcCCC
Confidence            3456777778888888  788775

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.82  E-value=0.015  Score=21.37  Aligned_cols=19  Identities=11%  Similarity=0.373  Sum_probs=16.2

Q ss_pred             CCCCCCCCchhHHHHHhhc
Q psy12015         76 HCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        76 ~c~~~f~~~~~l~~h~r~~   94 (96)
                      .|++.|...+++..|..+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            4889999999999888776

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.61  E-value=0.016  Score=24.32  Aligned_cols=25  Identities=24%  Similarity=0.695  Sum_probs=14.3

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhcCC
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIKHY   96 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~h~   96 (96)
                      -.|++|+....++.+|.+|...-||
T Consensus        25 atcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          25 ATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhh
Confidence            5566666666666666655554443

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.31  E-value=0.0099  Score=23.17  Aligned_cols=21  Identities=29%  Similarity=0.698  Sum_probs=9.9

Q ss_pred             eeeccccccccccchhHHHHh
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHK   62 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~   62 (96)
                      .|+|..|.+.+..-+++.+|-
T Consensus         8 ~yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHH
Confidence            444555554444444444443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.0097  Score=27.27  Aligned_cols=22  Identities=23%  Similarity=0.418  Sum_probs=14.2

Q ss_pred             eeCCCCCCCCCCchhHHHHHhh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      |.|..|++.|.+...|..|.++
T Consensus        16 fYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             EecccccCccCCHHHHHHHHcc
Confidence            5666666666666666666554

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.07  E-value=0.024  Score=20.89  Aligned_cols=21  Identities=24%  Similarity=0.450  Sum_probs=14.9

Q ss_pred             CCCCCCCCCchhHHHHHhhcC
Q psy12015         75 PHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        75 ~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      +.||+.|+++.-|+-|.+-.|
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            357888888877777766544

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.70  E-value=0.034  Score=20.05  Aligned_cols=24  Identities=25%  Similarity=0.504  Sum_probs=16.6

Q ss_pred             eeC--CCCCCCCCCchhHHHHHhhcC
Q psy12015         72 YQC--PHCPHRSKHKAHLTTHMAIKH   95 (96)
Q Consensus        72 ~~C--~~c~~~f~~~~~l~~h~r~~h   95 (96)
                      |.|  ..|+++|.....|..|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            445  358888888888877776653

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.55  E-value=0.037  Score=21.19  Aligned_cols=20  Identities=20%  Similarity=0.436  Sum_probs=13.8

Q ss_pred             eeCCCCCCCCCCchhHHHHH
Q psy12015         72 YQCPHCPHRSKHKAHLTTHM   91 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~   91 (96)
                      |-|.-||-.|+..+.|..|+
T Consensus         9 f~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHT
T ss_pred             eeccccceeecChhHHHhhh
Confidence            66777777777777776665

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.16  E-value=0.087  Score=22.01  Aligned_cols=28  Identities=21%  Similarity=0.366  Sum_probs=23.9

Q ss_pred             ccCeeeccccccccccchhHHHHhhhhc
Q psy12015         39 VHIDLKCDVCEKGYRYKTGLWRHKKFEC   66 (96)
Q Consensus        39 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~   66 (96)
                      .++|..|..|+.....+.+|.+|...-.
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            3779999999999999999999987533

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.44  E-value=0.036  Score=25.29  Aligned_cols=26  Identities=19%  Similarity=0.146  Sum_probs=21.9

Q ss_pred             ccCeeeccccccccccchhHHHHhhh
Q psy12015         39 VHIDLKCDVCEKGYRYKTGLWRHKKF   64 (96)
Q Consensus        39 ~~~~~~c~~c~~~f~~~~~l~~h~~~   64 (96)
                      |.-.|.|..|++.|.+...+..|.++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            33458999999999999999999864

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.96  E-value=0.15  Score=18.73  Aligned_cols=21  Identities=29%  Similarity=0.528  Sum_probs=11.5

Q ss_pred             eeccccccccccchhHHHHhh
Q psy12015         43 LKCDVCEKGYRYKTGLWRHKK   63 (96)
Q Consensus        43 ~~c~~c~~~f~~~~~l~~h~~   63 (96)
                      |.|..|++...+...+.-|.-
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            456666666555555554443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.13  E-value=0.11  Score=23.27  Aligned_cols=40  Identities=20%  Similarity=0.444  Sum_probs=27.1

Q ss_pred             cccCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCCC
Q psy12015         38 TVHIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHRS   81 (96)
Q Consensus        38 ~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~f   81 (96)
                      +....|.|+.|++.|+....+..   ..-.... |.|..|+...
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~-F~C~~C~~el   49 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL---FDPMTGT-FRCTFCHTEV   49 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH---EETTTTE-EBCSSSCCBC
T ss_pred             ccCCceECCCCCCCcchhhHHHh---cCcCCCe-EEecCCCCEE
Confidence            34567999999999987665432   2222234 9999998654

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=87.95  E-value=0.19  Score=19.90  Aligned_cols=26  Identities=23%  Similarity=0.437  Sum_probs=17.3

Q ss_pred             cCeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         40 HIDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        40 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      ++-|.|..||...             .|+.| -.|++||.
T Consensus         3 ~~~~vC~vCGyi~-------------~g~~P-e~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYIH-------------KGEDF-EKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCEE-------------ESSCC-SBCTTTCC
T ss_pred             CCEEECCCCCCEe-------------eCCCC-CcCCCCCC
Confidence            4567888888643             34334 67888875

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.21  E-value=0.21  Score=19.88  Aligned_cols=25  Identities=24%  Similarity=0.578  Sum_probs=16.8

Q ss_pred             CeeeccccccccccchhHHHHhhhhcCCCCceeCCCCCC
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPH   79 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~   79 (96)
                      +-|.|..||..+             .|+.| -.|++|+.
T Consensus         4 ~~~~C~vCG~i~-------------~g~~P-~~CPvCg~   28 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEAP-EYCPVCGA   28 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCCC-SBCTTTCC
T ss_pred             cEEECCCCCCEe-------------cCCCC-CcCCCCCC
Confidence            457888888643             34334 78888875

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.38  E-value=0.31  Score=21.76  Aligned_cols=27  Identities=15%  Similarity=0.325  Sum_probs=21.6

Q ss_pred             CeeeccccccccccchhHHHHhhhhcC
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      ..|.|..|...|.+...|..|...|..
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccH
Confidence            457888888888888888888887765

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=85.79  E-value=0.33  Score=20.15  Aligned_cols=36  Identities=22%  Similarity=0.519  Sum_probs=20.8

Q ss_pred             eeeccccccccccchhHHHHhhhhcCCCCceeCCCCCCC
Q psy12015         42 DLKCDVCEKGYRYKTGLWRHKKFECGQEPKYQCPHCPHR   80 (96)
Q Consensus        42 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~~C~~c~~~   80 (96)
                      .|.|..|+..+.....  .-.....-... |.|++|+..
T Consensus         3 ~y~C~~CgyiYd~~~G--dgt~Fe~LP~d-w~CP~C~a~   38 (45)
T d6rxna_           3 KYVCNVCGYEYDPAEH--DNVPFDQLPDD-WCCPVCGVS   38 (45)
T ss_dssp             CEEETTTCCEECGGGG--TTCCGGGSCTT-CBCTTTCCB
T ss_pred             CeEeCCCCeEECcccC--CCCCHHHCCCC-CCCcCCCCc
Confidence            5899999987754321  11111112234 899999853

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.41  E-value=0.26  Score=20.60  Aligned_cols=22  Identities=14%  Similarity=0.374  Sum_probs=16.1

Q ss_pred             eeCCCCCCCCCCchhHHHHHhh
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAI   93 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~   93 (96)
                      -+|..|+..+..+..+..|+-+
T Consensus         7 ~eC~lC~vKYs~~~SvrdHiFs   28 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHIFS   28 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccCcccceeeeeecchHhhhhh
Confidence            4788888877777777777644

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=83.29  E-value=0.57  Score=17.36  Aligned_cols=26  Identities=23%  Similarity=0.355  Sum_probs=18.6

Q ss_pred             eeecc--ccccccccchhHHHHhhhhcC
Q psy12015         42 DLKCD--VCEKGYRYKTGLWRHKKFECG   67 (96)
Q Consensus        42 ~~~c~--~c~~~f~~~~~l~~h~~~~~~   67 (96)
                      .|.|.  .|+..|.-.+.|..|+-.|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            45563  577778777888888777766

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.46  E-value=0.64  Score=18.03  Aligned_cols=22  Identities=27%  Similarity=0.706  Sum_probs=18.2

Q ss_pred             eccccccccccchhHHHHhhhh
Q psy12015         44 KCDVCEKGYRYKTGLWRHKKFE   65 (96)
Q Consensus        44 ~c~~c~~~f~~~~~l~~h~~~~   65 (96)
                      -|..|+..|.....+..|..-.
T Consensus        10 YC~~CDI~Fn~~~T~~aHKk~Y   31 (36)
T d1fu9a_          10 YCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHHHT
T ss_pred             HHhhCCceehhHHHHHHHHHhc
Confidence            5899999999988888887643

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=81.07  E-value=0.42  Score=25.72  Aligned_cols=22  Identities=23%  Similarity=0.572  Sum_probs=17.3

Q ss_pred             eeCCCCCCCCCCchhHHHHHhhc
Q psy12015         72 YQCPHCPHRSKHKAHLTTHMAIK   94 (96)
Q Consensus        72 ~~C~~c~~~f~~~~~l~~h~r~~   94 (96)
                      |+|..||+ +..-.++.+|++.|
T Consensus       147 YKCe~CgK-YvDie~~~~H~k~H  168 (218)
T d2czra1         147 YKCEECGK-YVDIENLEAHLREH  168 (218)
T ss_dssp             EECTTTCC-EEEGGGHHHHHHTT
T ss_pred             eehhhcCc-eecHHHHHHHHHHc
Confidence            67999987 56677888888865

>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Two-iron rubredoxin
species: Pseudomonas oleovorans [TaxId: 301]

Probab=80.75  E-value=0.27  Score=21.42  Aligned_cols=39  Identities=23%  Similarity=0.461  Sum_probs=21.4

Q ss_pred             CeeeccccccccccchhHHHH-----hhhhcCCCCceeCCCCCCC
Q psy12015         41 IDLKCDVCEKGYRYKTGLWRH-----KKFECGQEPKYQCPHCPHR   80 (96)
Q Consensus        41 ~~~~c~~c~~~f~~~~~l~~h-----~~~~~~~~~~~~C~~c~~~   80 (96)
                      +.|.|..|+..+.-...-..+     .....-... |.|+.|+..
T Consensus         3 kky~C~~CgyiYdp~~Gd~~~gi~pGT~F~~LP~d-w~CP~C~a~   46 (56)
T d1s24a_           3 LKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDD-WCCPDCGAT   46 (56)
T ss_dssp             CEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTT-CCCSSSCCC
T ss_pred             ccEECCCCCcEECcccCCcccCcCCCCChhhCCCC-CCCcCCCCc
Confidence            568999999777543221111     011111234 899999753