Psyllid ID: psy12022

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
Protein Sequence
MLPKDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPSVSSQAIG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccEccccHHHHHEEEcccccccccccccccccccccccccEEEcccccccEEEccHHHHHEEEcccccccccccccccccccccHHHHHHHHHccccEEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
mlpkdfsswpgekqnhaemfacdvcgkeykqkyglnrhkkydcgqepkyhgedfsswpgekqnhaemfacdvcgkeykqkyglnrhkkydcgqepkyqclycpyraKLRFNLKTHINVKHSYEYIRIILRTaimpsvssqaig
Flexible Loop (DISEMBL)
mlpkdfsswpgekqnhaeMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNrhkkydcgqepkYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRtaimpsvssqaig
Low Complexity Region (SEG)
MLPKDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPSVSSQAIG
Disordered region (IsUnstruct)
*****************EMFACDVCGKEYKQKYGLNRHKKYDCGQ***Y*******W*****NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIM*********
Disordered Region (DISOPRED)
MLPKDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSW****QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPSVS*****
Disordered Region (DISEMBL)
*************QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMP********
Disordered Region (DISPRO)
*****************EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAI**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLPKDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPSVSSQAIG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	143	2.2.26 [Sep-21-2011]
Q7KQZ4	787	Longitudinals lacking pro	no	N/A	0.566	0.102	0.341	6e-11
P42283	891	Longitudinals lacking pro	no	N/A	0.384	0.061	0.446	1e-09
Q9V5M3	878	Longitudinals lacking pro	no	N/A	0.167	0.027	0.55	1e-08
A0MS83	808	Zinc finger protein 148 O	yes	N/A	0.433	0.076	0.361	1e-08
Q62806	794	Zinc finger protein 148 O	yes	N/A	0.433	0.078	0.361	2e-08
Q5R782	794	Zinc finger protein 148 O	no	N/A	0.433	0.078	0.361	2e-08
Q61624	794	Zinc finger protein 148 O	yes	N/A	0.433	0.078	0.361	2e-08
Q9UQR1	794	Zinc finger protein 148 O	yes	N/A	0.433	0.078	0.361	2e-08
Q3Y4E1	794	Zinc finger protein 148 O	yes	N/A	0.433	0.078	0.361	2e-08
P19382	259	Protein snail homolog Sna	N/A	N/A	0.762	0.420	0.292	3e-08

>sp|Q7KQZ4|LOLA3_DROME Longitudinals lacking protein, isoforms A/B/D/L OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 44  GQEPKYHGEDFSSWPGEK----QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQC 99
           GQ P   G + S+  G       ++     C VCG+ YK K  L  H+K++CG+EP++QC
Sbjct: 657 GQSPSNSGHNNSAGGGSSVLGGADNGAGHPCPVCGRVYKLKSSLRNHQKWECGKEPQFQC 716

Query: 100 LYCPYRAKLRFNLKTHINVKHSYEY 124
            +C YRAK + ++  H+   H  ++
Sbjct: 717 PFCVYRAKQKMHIGRHMERMHKEKF 741

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.
Drosophila melanogaster (taxid: 7227)

>sp|P42283|LOLA1_DROME Longitudinals lacking protein, isoform G OS=Drosophila melanogaster GN=lola PE=1 SV=2

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 67  MFACDVCGKEYKQKYGLNRHKKYDCG-QEPKYQCLYCPYRAKLRFNLKTHINVKHS 121
           ++ C  CGK+Y+ K  L RH+  +CG +EP +QC YCPY++K R NL  H+   H+
Sbjct: 790 VYECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGVHVRKHHT 845

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q9V5M3|LOLA6_DROME Longitudinals lacking protein, isoforms N/O/W/X/Y OS=Drosophila melanogaster GN=lola PE=1 SV=3

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/40 (55%), Positives = 29/40 (72%)

Query: 68  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAK 107
           +AC+VCGK YK K  L RHK Y+CG EP  +C +CP++ K
Sbjct: 709 YACNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCK 748

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|A0MS83|ZN148_DANRE Zinc finger protein 148 OS=Danio rerio GN=znf148 PE=2 SV=2

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 21/83 (25%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
           F C+ C   + QKY L RH+K   G++P                    F CD CG ++ Q
Sbjct: 208 FQCNQCDMRFIQKYLLQRHEKIHTGEKP--------------------FRCDECGMKFIQ 247

Query: 80  KYGLNRHKKYDCGQEPKYQCLYC 102
           KY + RHK+   G++P YQC YC
Sbjct: 248 KYHMERHKRTHSGEKP-YQCDYC 269

Involved in transcriptional regulation. Represses the transcription of a number of genes. Required for primitive and definitive hematopoiesis during embryonic development.

Danio rerio (taxid: 7955)

>sp|Q62806|ZN148_RAT Zinc finger protein 148 OS=Rattus norvegicus GN=Znf148 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 21/83 (25%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
           F C  C   + QKY L RH+K   G++P                    F CD CG  + Q
Sbjct: 199 FQCSQCDMRFIQKYLLQRHEKIHTGEKP--------------------FRCDECGMRFIQ 238

Query: 80  KYGLNRHKKYDCGQEPKYQCLYC 102
           KY + RHK+   G++P YQC YC
Sbjct: 239 KYHMERHKRTHSGEKP-YQCEYC 260

Involved in transcriptional regulation. Represses the transcription of a number of genes including gastrin, stromelysin and enolase. Binds to the G-rich box in the enhancer region of these genes.

Rattus norvegicus (taxid: 10116)

>sp|Q5R782|ZN148_PONAB Zinc finger protein 148 OS=Pongo abelii GN=ZNF148 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 21/83 (25%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
           F C  C   + QKY L RH+K   G++P                    F CD CG  + Q
Sbjct: 199 FQCSQCDMRFIQKYLLQRHEKIHTGEKP--------------------FRCDECGMRFIQ 238

Query: 80  KYGLNRHKKYDCGQEPKYQCLYC 102
           KY + RHK+   G++P YQC YC
Sbjct: 239 KYHMERHKRTHSGEKP-YQCEYC 260

Involved in transcriptional regulation. Represses the transcription of a number of genes including gastrin, stromelysin and enolase. Binds to the G-rich box in the enhancer region of these genes.

Pongo abelii (taxid: 9601)

>sp|Q61624|ZN148_MOUSE Zinc finger protein 148 OS=Mus musculus GN=Znf148 PE=1 SV=2

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 21/83 (25%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
           F C  C   + QKY L RH+K   G++P                    F CD CG  + Q
Sbjct: 199 FQCSQCDMRFIQKYLLQRHEKIHTGEKP--------------------FRCDECGMRFIQ 238

Query: 80  KYGLNRHKKYDCGQEPKYQCLYC 102
           KY + RHK+   G++P YQC YC
Sbjct: 239 KYHMERHKRTHSGEKP-YQCEYC 260

Involved in transcriptional regulation. Represses the transcription of a number of genes including gastrin, stromelysin and enolase. Binds to the G-rich box in the enhancer region of these genes.

Mus musculus (taxid: 10090)

>sp|Q9UQR1|ZN148_HUMAN Zinc finger protein 148 OS=Homo sapiens GN=ZNF148 PE=1 SV=2

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 21/83 (25%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
           F C  C   + QKY L RH+K   G++P                    F CD CG  + Q
Sbjct: 199 FQCSQCDMRFIQKYLLQRHEKIHTGEKP--------------------FRCDECGMRFIQ 238

Query: 80  KYGLNRHKKYDCGQEPKYQCLYC 102
           KY + RHK+   G++P YQC YC
Sbjct: 239 KYHMERHKRTHSGEKP-YQCEYC 260

Involved in transcriptional regulation. Represses the transcription of a number of genes including gastrin, stromelysin and enolase. Binds to the G-rich box in the enhancer region of these genes.

Homo sapiens (taxid: 9606)

>sp|Q3Y4E1|ZN148_BOVIN Zinc finger protein 148 OS=Bos taurus GN=ZNF148 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 21/83 (25%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
           F C  C   + QKY L RH+K   G++P                    F CD CG  + Q
Sbjct: 199 FQCSQCDMRFIQKYLLQRHEKIHTGEKP--------------------FRCDECGMRFIQ 238

Query: 80  KYGLNRHKKYDCGQEPKYQCLYC 102
           KY + RHK+   G++P YQC YC
Sbjct: 239 KYHMERHKRTHSGEKP-YQCEYC 260

Involved in transcriptional regulation. Represses the transcription of a number of genes including gastrin, stromelysin and enolase. Binds to the G-rich box in the enhancer region of these genes.

Bos taurus (taxid: 9913)

>sp|P19382|SNAI1_XENLA Protein snail homolog Sna OS=Xenopus laevis GN=snai1 PE=1 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 14/123 (11%)

Query: 10  PGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP------KYHGEDFSSWPGEK-- 61
           P      AE F C++C K Y    GL++HK+  C  +       KY  +++ S    K  
Sbjct: 109 PASSATEAEKFQCNLCSKSYSTFAGLSKHKQLHCDSQTRKSFSCKYCEKEYVSLGALKMH 168

Query: 62  -QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC----PYRAKLRFNLKTHI 116
            ++H     C +CGK + + + L  H +   G++P + C +C      R+ LR +L+TH 
Sbjct: 169 IRSHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKP-FSCTHCNRAFADRSNLRAHLQTHS 227

Query: 117 NVK 119
           +VK
Sbjct: 228 DVK 230

Transcriptional repressor. Acts upstream of snai2/slug, zic5 and other neural crest markers in the specification of the neural crest and neural crest migration. Involved in embryonic mesoderm formation.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
307206180	207	Zinc finger protein 672 [Harpegnathos sa	0.762	0.526	0.285	7e-12
45552567	771	longitudinals lacking, isoform W [Drosop	0.377	0.070	0.518	3e-11
345491615	434	PREDICTED: GDNF-inducible zinc finger pr	0.636	0.209	0.367	6e-11
270003816	1844	hypothetical protein TcasGA2_TC003097 [T	0.706	0.054	0.278	2e-10
270003819	500	hypothetical protein TcasGA2_TC003100 [T	0.650	0.186	0.354	1e-09
158292853	634	AGAP005245-PG [Anopheles gambiae str. PE	0.286	0.064	0.433	1e-09
195425431	220	GK19011 [Drosophila willistoni] gi|19415	0.426	0.277	0.507	1e-09
157121098	731	lola [Aedes aegypti] gi|108874717|gb|EAT	0.286	0.056	0.416	1e-09
195153473	175	GL17195 [Drosophila persimilis] gi|19411	0.377	0.308	0.537	2e-09
195026424	319	GH20627 [Drosophila grimshawi] gi|193902	0.433	0.194	0.467	3e-09

>gi|307206180|gb|EFN84260.1| Zinc finger protein 672 [Harpegnathos saltator]

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 31/140 (22%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYH------------------------GEDFS 55
           F C  CG+ +  K   +RH  Y+CG EP++                         G+ F 
Sbjct: 49  FKCQKCGRGFTLKRNKDRHVNYECGHEPRFQCPYCGLRSFYAAVPQLDLNYILQSGKGFD 108

Query: 56  SW-------PGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKL 108
           +        PG+ +N  + F C  CG+ +  K  + RH KY+CGQ P++QC YC +R+K 
Sbjct: 109 AESNNSYYPPGQVRNPDKPFRCPKCGRCFTVKGNMTRHFKYECGQPPRFQCPYCKFRSKQ 168

Query: 109 RFNLKTHINVKHSYEYIRII 128
             N+ +HI  +H+ + + ++
Sbjct: 169 TSNVMSHIRTRHAGQKVYVV 188

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|45552567|ref|NP_995806.1| longitudinals lacking, isoform W [Drosophila melanogaster] gi|29539421|dbj|BAC67593.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539461|dbj|BAC67613.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539501|dbj|BAC67633.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539541|dbj|BAC67653.1| Lola protein isoform Q [Drosophila melanogaster] gi|45445597|gb|AAS64876.1| longitudinals lacking, isoform W [Drosophila melanogaster]

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/54 (51%), Positives = 39/54 (72%)

Query: 68  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS 121
           +AC+VCGK YK K  L RHK Y+CG EP  +C +CP++ K R +L+ H+N KH+
Sbjct: 709 YACNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCKYRSDLRKHMNQKHA 762

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345491615|ref|XP_003426658.1| PREDICTED: GDNF-inducible zinc finger protein 1-like isoform 3 [Nasonia vitripennis]

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 15/106 (14%)

Query: 19  MFACDVCGKEYKQKYGLNRHKKY---DCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGK 75
           +F CD CG+ +  KY L RH        G+ P+            K+   E   C  C K
Sbjct: 276 LFKCDKCGRNFTAKYSLKRHMLLLHTGTGKLPR------------KKIIEEETICHKCHK 323

Query: 76  EYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS 121
            Y+ KYGL RHKKY+CG+EP++ C +C YR++ + NL  H+   H+
Sbjct: 324 RYRDKYGLYRHKKYECGKEPQFACAHCEYRSRQKINLVKHLENIHA 369

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003816|gb|EFA00264.1| hypothetical protein TcasGA2_TC003097 [Tribolium castaneum]

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 46/147 (31%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYH----------------------------- 50
           FAC  CG+ Y +K  L RH  Y+CG+EP++                              
Sbjct: 539 FACVQCGRSYIRKDSLQRHLTYECGKEPQFQCPFSQDLRVSRPWERWPSHLALPMMLMRE 598

Query: 51  -------------GEDFSSWPGEKQNHAEM----FACDVCGKEYKQKYGLNRHKKYDCGQ 93
                          D S+   + +N   +    F C VCG+ YK K  L  H+K++CG+
Sbjct: 599 SMKKSMIQSVNRSSLDLSTSSPKSRNRTSLDGTGFDCSVCGRIYKLKSSLRNHQKWECGK 658

Query: 94  EPKYQCLYCPYRAKLRFNLKTHINVKH 120
           EP+++C YC Y+AK + ++  H+   H
Sbjct: 659 EPQFKCPYCVYKAKQKMHMARHMERMH 685

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003819|gb|EFA00267.1| hypothetical protein TcasGA2_TC003100 [Tribolium castaneum]

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
           F C+ C K+YK K  LNRH +YDCG+EP +       +   ++ H   + C  C + Y  
Sbjct: 119 FKCENCVKQYKSKTALNRHMRYDCGKEPLFKCH-LCHYRAYQKVHVRPYPCPTCNRVYSH 177

Query: 80  KYGLNRHKKYDCGQEPKYQC--LYCPYRAKLRFNLK 113
                RH KY+CG++P ++C  + C Y A+ +  LK
Sbjct: 178 SATRLRHIKYECGKQPSFKCPVVPCSYMARRKSTLK 213

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158292853|ref|XP_314150.4| AGAP005245-PG [Anopheles gambiae str. PEST] gi|157017188|gb|EAA09485.4| AGAP005245-PG [Anopheles gambiae str. PEST]

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 39/60 (65%)

Query: 68  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRI 127
           FAC  CG+ YK K  L  H+K++CG+EP++QC YC YRAK + ++  H+   H   Y ++
Sbjct: 553 FACPDCGRTYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHKERYFKM 612

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195425431|ref|XP_002061011.1| GK19011 [Drosophila willistoni] gi|194157096|gb|EDW71997.1| GK19011 [Drosophila willistoni]

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 2/63 (3%)

Query: 68  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKH--SYEYI 125
           FAC+VCGK YK K  L RHK Y+CG EP  +C +CP++ K + +L+ H+N KH  S E +
Sbjct: 152 FACNVCGKTYKIKGSLKRHKNYECGVEPTLKCPHCPHKCKYKSDLRKHMNQKHAESGESL 211

Query: 126 RII 128
            II
Sbjct: 212 TII 214

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157121098|ref|XP_001659824.1| lola [Aedes aegypti] gi|108874717|gb|EAT38942.1| AAEL009212-PC [Aedes aegypti]

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 39/60 (65%)

Query: 68  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRI 127
           FAC  CG+ YK K  L  H+K++CG+EP++QC YC YRAK + ++  H+   H   + ++
Sbjct: 650 FACPDCGRVYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHKERFFKL 709

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195153473|ref|XP_002017650.1| GL17195 [Drosophila persimilis] gi|194113446|gb|EDW35489.1| GL17195 [Drosophila persimilis]

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 39/54 (72%)

Query: 68  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS 121
           FAC+VCGK YK K  L RHK Y+CG EP  +C +CP++ K + +L+ H+N KHS
Sbjct: 112 FACNVCGKTYKIKGSLKRHKNYECGVEPALKCPHCPHKCKYKSDLRKHMNQKHS 165

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195026424|ref|XP_001986253.1| GH20627 [Drosophila grimshawi] gi|193902253|gb|EDW01120.1| GH20627 [Drosophila grimshawi]

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 42/62 (67%)

Query: 68  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRI 127
           +AC+VCGK YK K  L RHK Y+CG EP  +C +CP++ K + +L+ H+N KHS     +
Sbjct: 256 YACNVCGKTYKIKGSLKRHKNYECGVEPTLKCPHCPHKCKYKSDLRKHMNQKHSESGDTL 315

Query: 128 IL 129
           +L
Sbjct: 316 LL 317

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
ZFIN|ZDB-GENE-080220-38	333	zgc:175107 "zgc:175107" [Danio	0.762	0.327	0.305	1.3e-11
UNIPROTKB|F1LYN5	149	F1LYN5 "Uncharacterized protei	0.713	0.684	0.339	1.3e-11
UNIPROTKB|Q9N003	741	ZNF425 "Zinc finger protein 42	0.734	0.141	0.339	4.8e-11
ZFIN|ZDB-GENE-110913-99	354	si:ch211-120c15.3 "si:ch211-12	0.727	0.293	0.307	5.6e-11
ZFIN|ZDB-GENE-110913-169	355	si:ch211-241n15.3 "si:ch211-24	0.727	0.292	0.307	5.6e-11
MGI|MGI:99212	782	Zfy1 "zinc finger protein 1, Y	0.412	0.075	0.403	9.7e-11
UNIPROTKB|P80944	148	ZFX "Zinc finger X-chromosomal	0.699	0.675	0.339	1.2e-10
UNIPROTKB|Q29419	148	ZFY "Zinc finger Y-chromosomal	0.699	0.675	0.339	1.2e-10
UNIPROTKB|K7EP55	215	ZNF253 "Zinc finger protein 25	0.790	0.525	0.314	2e-10
UNIPROTKB|P19382	259	snai1 "Protein snail homolog S	0.762	0.420	0.292	2e-10

ZFIN|ZDB-GENE-080220-38 zgc:175107 "zgc:175107" [Danio rerio (taxid:7955)]

 Score = 163 (62.4 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 37/121 (30%), Positives = 61/121 (50%)

Query:    13 KQNHA--EMFACDVCGKEYKQKYGLNRHKKYDCGQEP---KYHGEDFSSWPGEK---QNH 64
             K+ H   + F+C  CGK + QK  L  H +   G++P    + G++F+     K   +NH
Sbjct:   100 KRTHTGEKPFSCQQCGKSFSQKQNLKVHMRVHTGEKPFSCPFCGQNFTHKGNLKTHVRNH 159

Query:    65 A--EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY 122
                  F C++CGK + +K  LN H +   G++P + C  C    + + NL  H+ + HS 
Sbjct:   160 TGESAFICNLCGKSFSRKESLNTHMRIHSGEKP-FGCAQCGKSFRCKVNLNCHMRI-HSR 217

Query:   123 E 123
             E
Sbjct:   218 E 218

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1LYN5 F1LYN5 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 38/112 (33%), Positives = 59/112 (52%)

Query:    20 FACDVCGKEYKQKYGLNRHKKYDCGQEP---KYHGEDF---SSWPGEKQNHA--EMFACD 71
             FACD CGK +KQ+  L  H +   G++P   K   + F   S     ++ H+  + + CD
Sbjct:     8 FACDTCGKSFKQRTSLYTHIRIHTGEKPYECKECRKSFILKSYLTVHQRTHSGEKPYGCD 67

Query:    72 VCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE 123
             +CGK +KQ   L+ HK+    ++P Y+C+ C    K   +L TH  V H+ E
Sbjct:    68 ICGKSFKQNSHLHAHKRTHTSEKP-YECIVCGKSYKQSPSLYTHKKV-HTSE 117

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9N003 ZNF425 "Zinc finger protein 425" [Macaca fascicularis (taxid:9541)]

 Score = 164 (62.8 bits), Expect = 4.8e-11, P = 4.8e-11
 Identities = 39/115 (33%), Positives = 59/115 (51%)

Query:    15 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGE-DFS-SWPGEKQNHAEM----- 67
             N  + F+C  CG+ ++++  L  H +   G+EP    E D S SW    + H  M     
Sbjct:   510 NTEKPFSCAECGRSFRRRAHLTEHTRLHSGEEPFQCPECDKSFSWKASMKFHQRMHRDEK 569

Query:    68 -FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS 121
              FAC  CGK Y  +  L  H +   G++P YQC  C    +L+ NLK+H+ ++HS
Sbjct:   570 PFACSECGKTYTHQSQLTEHLRLHSGEKP-YQCPECQKTFRLKGNLKSHL-LQHS 622

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISS

ZFIN|ZDB-GENE-110913-99 si:ch211-120c15.3 "si:ch211-120c15.3" [Danio rerio (taxid:7955)]

 Score = 158 (60.7 bits), Expect = 5.6e-11, P = 5.6e-11
 Identities = 36/117 (30%), Positives = 58/117 (49%)

Query:    15 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGE------KQNHA--E 66
             N   +F C  CGK + +K+ LN H +   G++P    E   S+P +      ++ H   +
Sbjct:   152 NEGRIFTCTQCGKSFAKKHNLNIHMRIHTGEKPYTCTECGQSFPYKTTFNIHRRIHTGEK 211

Query:    67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC----PYRAKLRFNLKTHINVK 119
              + C  CGK +  K  LN HK+   G++P Y+C  C    PY+  L  +++TH   K
Sbjct:   212 PYRCTECGKSFTHKTTLNNHKRTHTGEKP-YRCTECGQRFPYKTTLNNHMRTHTGEK 267

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-169 si:ch211-241n15.3 "si:ch211-241n15.3" [Danio rerio (taxid:7955)]

 Score = 158 (60.7 bits), Expect = 5.6e-11, P = 5.6e-11
 Identities = 36/117 (30%), Positives = 58/117 (49%)

Query:    15 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGE------KQNHA--E 66
             N   +F C  CGK + +K+ LN H +   G++P    E   S+P +      ++ H   +
Sbjct:   153 NEGRIFTCTQCGKSFAKKHNLNIHMRIHTGEKPYTCTECGQSFPYKTTFNIHRRIHTGEK 212

Query:    67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC----PYRAKLRFNLKTHINVK 119
              + C  CGK +  K  LN HK+   G++P Y+C  C    PY+  L  +++TH   K
Sbjct:   213 PYRCTECGKSFTHKNTLNNHKRIHTGEKP-YRCTECGQRFPYKTTLTNHMRTHTGEK 268

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

MGI|MGI:99212 Zfy1 "zinc finger protein 1, Y linked" [Mus musculus (taxid:10090)]

 Score = 127 (49.8 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query:    64 HAEMFA--CDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS 121
             H + F   C  CGK ++    L +H +   G++P Y+C YC Y++    NLKTHI  KHS
Sbjct:   520 HRKKFPHICGECGKGFRHPSALKKHIRVHTGEKP-YECQYCEYKSADSSNLKTHIKSKHS 578

Query:   122 YE 123
              E
Sbjct:   579 KE 580

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|P80944 ZFX "Zinc finger X-chromosomal protein" [Sus scrofa (taxid:9823)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 39/115 (33%), Positives = 53/115 (46%)

Query:    22 CDVCGKEYKQKYGLNRHKKY--DCGQEPKYHGEDFSSWPGEKQN---------HAEMFA- 69
             CD CGK +     L  HK    + G   K H   F  +   +Q          H++ F  
Sbjct:    18 CDECGKHFSHAGALFTHKMVHKEKGAN-KMHKCKFCEYETAEQGLLNRHLLAVHSKNFPH 76

Query:    70 -CDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE 123
              C  CGK ++    L +H +   G++P YQC YC YR+    NLKTH+  KHS E
Sbjct:    77 ICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYCEYRSADSSNLKTHVKTKHSKE 130

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q29419 ZFY "Zinc finger Y-chromosomal protein" [Sus scrofa (taxid:9823)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 39/115 (33%), Positives = 53/115 (46%)

Query:    22 CDVCGKEYKQKYGLNRHKKY--DCGQEPKYHGEDFSSWPGEKQN---------HAEMFA- 69
             CD CGK +     L  HK    + G   K H   F  +   +Q          H++ F  
Sbjct:    18 CDECGKHFSHAGALFTHKMVHKEKGAN-KMHKCKFCEYETAEQGLLNRHLLAVHSKNFPH 76

Query:    70 -CDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE 123
              C  CGK ++    L +H +   G++P YQC YC YR+    NLKTH+  KHS E
Sbjct:    77 ICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYCEYRSADSSNLKTHVKTKHSKE 130

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|K7EP55 ZNF253 "Zinc finger protein 253" [Homo sapiens (taxid:9606)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 40/127 (31%), Positives = 60/127 (47%)

Query:     6 FSSWPGEKQNHA--EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYH----GEDFSSWPG 59
             FS+    K  H    +F C +CGK +K+   L  HKK   G++P Y     G+ F+    
Sbjct:    92 FSNSNTYKTRHTGINLFKCIICGKAFKRSSTLTTHKKIHTGEKP-YRCEECGKAFNQSAN 150

Query:    60 ---EKQNHA--EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKT 114
                 K+ H   + + C+ CGK +KQ   L  HKK   G++P Y+C  C        +L T
Sbjct:   151 LTTHKRIHTGEKPYRCEECGKAFKQSSNLTTHKKIHTGEKP-YKCEECGKAFNRSTDLTT 209

Query:   115 HINVKHS 121
             H  + H+
Sbjct:   210 H-KIVHT 215

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P19382 snai1 "Protein snail homolog Sna" [Xenopus laevis (taxid:8355)]

 Score = 149 (57.5 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 36/123 (29%), Positives = 60/123 (48%)

Query:    10 PGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP------KYHGEDFSSWPGEK-- 61
             P      AE F C++C K Y    GL++HK+  C  +       KY  +++ S    K  
Sbjct:   109 PASSATEAEKFQCNLCSKSYSTFAGLSKHKQLHCDSQTRKSFSCKYCEKEYVSLGALKMH 168

Query:    62 -QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPY----RAKLRFNLKTHI 116
              ++H     C +CGK + + + L  H +   G++P + C +C      R+ LR +L+TH 
Sbjct:   169 IRSHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKP-FSCTHCNRAFADRSNLRAHLQTHS 227

Query:   117 NVK 119
             +VK
Sbjct:   228 DVK 230

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0001755 "neural crest cell migration" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISS

GO:0014029 "neural crest formation" evidence=TAS

GO:0014036 "neural crest cell fate specification" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	143
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	0.001

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 20  FACDV--CGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEY 77
           + C V  C K+YK + GL  H  +   Q  K H               + + C+VC K Y
Sbjct: 350 YKCPVEGCNKKYKNQNGLKYHMLHG-HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRY 408

Query: 78  KQKYGLNRHKKY 89
           K   GL  H+K+
Sbjct: 409 KNLNGLKYHRKH 420

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	143
KOG2462|consensus	279		99.87
KOG2462|consensus	279		99.78
KOG3623|consensus	1007		99.55
KOG3576|consensus	267		99.53
KOG1074|consensus	958		99.43
KOG3623|consensus	1007		99.38
KOG3576|consensus	267		99.19
KOG3608|consensus	467		99.15
PHA00733	128	hypothetical protein	99.12
PHA02768	55	hypothetical protein; Provisional	99.03
KOG3608|consensus	467		98.99
KOG1074|consensus	958		98.83
PHA02768	55	hypothetical protein; Provisional	98.73
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.7
PHA00733	128	hypothetical protein	98.61
PLN03086	567	PRLI-interacting factor K; Provisional	98.6
PLN03086	567	PRLI-interacting factor K; Provisional	98.52
KOG3993|consensus	500		98.48
PHA00616	44	hypothetical protein	98.45
PHA00732	79	hypothetical protein	98.39
KOG3993|consensus	500		98.37
PHA00616	44	hypothetical protein	98.23
PHA00732	79	hypothetical protein	98.14
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.12
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.11
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.03
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.02
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.93
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.87
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.75
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.75
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.56
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.45
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.38
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.29
smart00355	26	ZnF_C2H2 zinc finger.	97.24
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.19
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.04
smart00355	26	ZnF_C2H2 zinc finger.	97.03
PRK04860	160	hypothetical protein; Provisional	96.89
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.85
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.69
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.51
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.44
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.35
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.09
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.26
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.38
PRK04860	160	hypothetical protein; Provisional	94.08
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.05
KOG1146|consensus	1406		91.34
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	91.1
COG4049	65	Uncharacterized protein containing archaeal-type C	91.09
COG4049	65	Uncharacterized protein containing archaeal-type C	90.21
COG5048	467	FOG: Zn-finger [General function prediction only]	88.61
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	88.6
KOG2231|consensus	669		88.35
KOG1146|consensus	1406		87.81
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	87.58
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	87.18
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	86.98
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	86.68
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	86.46
PHA00626	59	hypothetical protein	85.58
COG5048	467	FOG: Zn-finger [General function prediction only]	85.4
COG1592	166	Rubrerythrin [Energy production and conversion]	84.24
KOG2186|consensus	276		84.06
KOG2893|consensus	341		84.04
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	83.78
KOG4173|consensus	253		83.03
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	82.2
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	82.0
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	81.66
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	81.05
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	80.78

>KOG2462|consensus

Probab=99.87  E-value=3.8e-23  Score=137.96  Aligned_cols=119  Identities=22%  Similarity=0.441  Sum_probs=103.0

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCCC--cccC----CCCCCCccc---cccCCCccccCcccccccChHHHHhhhh
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQEP--KYHG----EDFSSWPGE---KQNHAEMFACDVCGKEYKQKYGLNRHKK   88 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~--~~~c----~~f~~~~~~---~~~~~~~~~C~~C~~~~~~~~~l~~h~~   88 (143)
                      ..|.|..||+.+.+..+|..|+.+|+....  .+.|    +.+.....+   +.++.-+++|.+||+.|...+-|+.|+|
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiR  208 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIR  208 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccc
Confidence            359999999999999999999999986643  2445    666666553   4566788999999999999999999999


Q ss_pred             hhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHHHHHHhhccCccc
Q psy12022         89 YDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPSV  137 (143)
Q Consensus        89 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~  137 (143)
                      +|+||+| |.|..|+++|..+++|+.|+++|.+.+.+.+..+.+.|..-
T Consensus       209 THTGEKP-F~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~  256 (279)
T KOG2462|consen  209 THTGEKP-FSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALK  256 (279)
T ss_pred             cccCCCC-ccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHH
Confidence            9999999 99999999999999999999999999999888888776543

>KOG2462|consensus

Probab=99.78  E-value=1.8e-19  Score=120.45  Aligned_cols=98  Identities=23%  Similarity=0.423  Sum_probs=86.4

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCCCCcccC----CCCCC--Ccc---ccccCCCccccCcccccccChHHHHhhh
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG----EDFSS--WPG---EKQNHAEMFACDVCGKEYKQKYGLNRHK   87 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c----~~f~~--~~~---~~~~~~~~~~C~~C~~~~~~~~~l~~h~   87 (143)
                      .+.+.|..|++.+.+...|..|+++|.-.   +.|    +.|+.  ..+   ++|||++||.|+.|++.|..++.|..||
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~l~---c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHm  235 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHTLP---CECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHM  235 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccCCC---cccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHH
Confidence            56799999999999999999999999832   444    66652  122   5899999999999999999999999999


Q ss_pred             hhhcCCCCCeeccCCcccccChHHHHhHHhh
Q psy12022         88 KYDCGQEPKYQCLYCPYRAKLRFNLKTHINV  118 (143)
Q Consensus        88 ~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~  118 (143)
                      ++|.+.++ |+|..|++.|..++-|.+|...
T Consensus       236 QTHS~~K~-~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  236 QTHSDVKK-HQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             HhhcCCcc-ccCcchhhHHHHHHHHHHhhhh
Confidence            99999888 9999999999999999999875

>KOG3623|consensus

Probab=99.55  E-value=1.5e-15  Score=113.04  Aligned_cols=82  Identities=32%  Similarity=0.656  Sum_probs=74.1

Q ss_pred             CCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCCC
Q psy12022         15 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQE   94 (143)
Q Consensus        15 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   94 (143)
                      +++.+|.|+.|++.|...+.|.+|.--|                    +|++||.|.+|.+.|..+..|..|+|.|.|++
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEH--------------------sGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEK  949 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEH--------------------SGQRPYQCIICKKAFKHKHHLTEHKRLHSGEK  949 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhh--------------------cCCCCcccchhhHhhhhhhhhhhhhhhccCCC
Confidence            4456899999999999999999997544                    45555999999999999999999999999999


Q ss_pred             CCeeccCCcccccChHHHHhHHh
Q psy12022         95 PKYQCLYCPYRAKLRFNLKTHIN  117 (143)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~  117 (143)
                      | |.|.+|++.|.....+..|+.
T Consensus       950 P-fQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  950 P-FQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             c-chhhhhhhhcccccchHhhhc
Confidence            9 999999999999999999986

>KOG3576|consensus

Probab=99.53  E-value=1.1e-15  Score=98.36  Aligned_cols=83  Identities=33%  Similarity=0.734  Sum_probs=55.9

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCCCCCe
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKY   97 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~   97 (143)
                      -.|.|..|++.|.-...|.+|++-|...+.                    +-|..||+.|....+|..|+++|+|-.| |
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kch~~vkr--------------------~lct~cgkgfndtfdlkrh~rthtgvrp-y  174 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKCHSDVKR--------------------HLCTFCGKGFNDTFDLKRHTRTHTGVRP-Y  174 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhhccHHHH--------------------HHHhhccCcccchhhhhhhhccccCccc-c
Confidence            368999999999999999999999998876                    4455555555555555555555555444 5


Q ss_pred             eccCCcccccChHHHHhHHhhhcc
Q psy12022         98 QCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        98 ~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      +|..|+++|...-.|..|++.-|+
T Consensus       175 kc~~c~kaftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  175 KCSLCEKAFTQRCSLESHLKKVHG  198 (267)
T ss_pred             chhhhhHHHHhhccHHHHHHHHcC
Confidence            555555555555555555554444

>KOG1074|consensus

Probab=99.43  E-value=8e-14  Score=105.29  Aligned_cols=54  Identities=24%  Similarity=0.472  Sum_probs=50.7

Q ss_pred             cccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      ..|.+|.+...=.+.|+.|.++|+|++| |+|++|+++|.++.+|+.|+.+|...
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERP-FkCKiCgRAFtTkGNLkaH~~vHka~  659 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERP-FKCKICGRAFTTKGNLKAHMSVHKAK  659 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCc-cccccccchhccccchhhcccccccC
Confidence            5799999999999999999999999888 99999999999999999999998654

>KOG3623|consensus

Probab=99.38  E-value=1.2e-13  Score=103.25  Aligned_cols=95  Identities=23%  Similarity=0.465  Sum_probs=75.0

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCcccc-ccCCCccccCcccccccChHHHHhhhhhhcCCCC
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEK-QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   95 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~-~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~   95 (143)
                      +..|.|..|..+|.....|.+|+.+|..-..-.        ...+ -.+.+.|+|.+||+.|..+..|..|+|+|.|++|
T Consensus       238 e~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa--------~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKP  309 (1007)
T KOG3623|consen  238 EPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQA--------ISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKP  309 (1007)
T ss_pred             CCCCcchhhhhhhhhHHHHHHHHHhhcCCCccc--------ccccchhhhccccccccchhhhhHHHHHhhheeecCCCC
Confidence            446778888888888888888887776544300        0001 1123669999999999999999999999999999


Q ss_pred             CeeccCCcccccChHHHHhHHhhhc
Q psy12022         96 KYQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                       |.|..|.+.|.....+.-|+....
T Consensus       310 -feCpnCkKRFSHSGSySSHmSSKK  333 (1007)
T KOG3623|consen  310 -FECPNCKKRFSHSGSYSSHMSSKK  333 (1007)
T ss_pred             -cCCcccccccccCCcccccccccc
Confidence             999999999999999999987543

>KOG3576|consensus

Probab=99.19  E-value=1e-11  Score=80.30  Aligned_cols=94  Identities=24%  Similarity=0.592  Sum_probs=80.0

Q ss_pred             cCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCC
Q psy12022         14 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        14 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      |+.-+.|.|..||+.|.+..+|.+|+++|.+..|                    |+|..|++.|...-.|..|.+..+|.
T Consensus       140 h~~vkr~lct~cgkgfndtfdlkrh~rthtgvrp--------------------ykc~~c~kaftqrcsleshl~kvhgv  199 (267)
T KOG3576|consen  140 HSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRP--------------------YKCSLCEKAFTQRCSLESHLKKVHGV  199 (267)
T ss_pred             ccHHHHHHHhhccCcccchhhhhhhhccccCccc--------------------cchhhhhHHHHhhccHHHHHHHHcCc
Confidence            3444568899999999999999999999998887                    99999999999999999999866653


Q ss_pred             C----------CCeeccCCcccccChHHHHhHHhhhccHHHHHH
Q psy12022         94 E----------PKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRI  127 (143)
Q Consensus        94 ~----------~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  127 (143)
                      .          +.|+|..||..-.....+..|+..+|+......
T Consensus       200 ~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spall  243 (267)
T KOG3576|consen  200 QHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPALL  243 (267)
T ss_pred             hHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHHHH
Confidence            2          238999999999999999999999998754433

>KOG3608|consensus

Probab=99.15  E-value=8.1e-12  Score=86.77  Aligned_cols=108  Identities=19%  Similarity=0.431  Sum_probs=56.5

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCC-CCcccC----CCCCCCccc-cc--cCCCccccCcccccccChHHHH
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ-EPKYHG----EDFSSWPGE-KQ--NHAEMFACDVCGKEYKQKYGLN   84 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-~~~~~c----~~f~~~~~~-~~--~~~~~~~C~~C~~~~~~~~~l~   84 (143)
                      .|++||...|+.||..|.++..|..|++..... +..|.|    +.|.....+ .|  .+-..|+|+.|.-+.+..+.|.
T Consensus       201 ~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~  280 (467)
T KOG3608|consen  201 THSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLT  280 (467)
T ss_pred             hcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHH
Confidence            455555555555555555555555554322211 111333    222222111 11  1223466666766666666777


Q ss_pred             hhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhc
Q psy12022         85 RHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        85 ~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      .|++.-+...+||+|..|+..|.+.++|.+|+.+|.
T Consensus       281 ~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  281 THIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            776643333333777777777777777777776654

>PHA00733 hypothetical protein

Probab=99.12  E-value=6.1e-11  Score=72.97  Aligned_cols=85  Identities=14%  Similarity=0.211  Sum_probs=67.5

Q ss_pred             CCCCCCCccccccCChhHHhccc--ccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCCC
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHK--KYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQE   94 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~--~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   94 (143)
                      .+++.|..|...|.....|..+.  ..+.                 ...+.++|.|+.|++.|.....|..|++.+  ..
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~-----------------~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~   98 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLL-----------------TSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EH   98 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhc-----------------ccCCCCCccCCCCCCcCCCHHHHHHHHhcC--Cc
Confidence            56788999998888877766552  1111                 122345699999999999999999999976  24


Q ss_pred             CCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         95 PKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      + |.|.+|++.|.....|..|+...|+
T Consensus        99 ~-~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         99 S-KVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             C-ccCCCCCCccCCHHHHHHHHHHhcC
Confidence            5 9999999999999999999998775

>PHA02768 hypothetical protein; Provisional

Probab=99.03  E-value=1.1e-10  Score=60.30  Aligned_cols=43  Identities=14%  Similarity=0.294  Sum_probs=39.0

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHH
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNL  112 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l  112 (143)
                      .|+|++||+.|.....|..|+++|+  ++ ++|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~-~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TN-LKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Cc-ccCCcccceeccccee
Confidence            3899999999999999999999997  56 9999999999887765

>KOG3608|consensus

Probab=98.99  E-value=3.2e-10  Score=78.96  Aligned_cols=57  Identities=21%  Similarity=0.399  Sum_probs=45.7

Q ss_pred             ccccCc--ccccccChHHHHhhhhhhc-CCC-CCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         67 MFACDV--CGKEYKQKYGLNRHKKYDC-GQE-PKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        67 ~~~C~~--C~~~~~~~~~l~~h~~~h~-~~~-~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      .|.|..  |.+++.+...+..|++-++ |.+ ++|.|-.|++.|.+..+|..|+...|+-+
T Consensus       319 ~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~  379 (467)
T KOG3608|consen  319 VYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFR  379 (467)
T ss_pred             ceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhccc
Confidence            478866  8889988888989988665 444 34899999999999999999988877643

>KOG1074|consensus

Probab=98.83  E-value=6.8e-10  Score=84.57  Aligned_cols=83  Identities=23%  Similarity=0.508  Sum_probs=74.6

Q ss_pred             CCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCCCCC--
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPK--   96 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~--   96 (143)
                      |..|-.|-+....++.|+.|.++|.|+.+                    |+|.+||+.|.++..|+.|+.+|-. +++  
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERP--------------------FkCKiCgRAFtTkGNLkaH~~vHka-~p~~R  663 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERP--------------------FKCKICGRAFTTKGNLKAHMSVHKA-KPPAR  663 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCc--------------------cccccccchhccccchhhccccccc-Ccccc
Confidence            78899999999999999999998888877                    9999999999999999999998854 432  


Q ss_pred             --eecc---CCcccccChHHHHhHHhhhccH
Q psy12022         97 --YQCL---YCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        97 --~~C~---~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                        ++|+   +|-+.|...-.|..|.++|.++
T Consensus       664 ~q~ScP~~~ic~~kftn~V~lpQhIriH~~~  694 (958)
T KOG1074|consen  664 VQFSCPSTFICQKKFTNAVTLPQHIRIHLGG  694 (958)
T ss_pred             ccccCCchhhhcccccccccccceEEeecCC
Confidence              7899   9999999999999999998854

>PHA02768 hypothetical protein; Provisional

Probab=98.73  E-value=3.7e-09  Score=54.70  Aligned_cols=43  Identities=14%  Similarity=0.346  Sum_probs=37.3

Q ss_pred             CCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHH
Q psy12022         20 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLN   84 (143)
Q Consensus        20 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~   84 (143)
                      |+|+.||+.|...+.|..|++.|.  ++                    ++|..|++.|...+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~--------------------~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TN--------------------LKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--Cc--------------------ccCCcccceecccceeE
Confidence            799999999999999999999988  45                    78999999888766543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.70  E-value=1.6e-08  Score=44.81  Aligned_cols=26  Identities=35%  Similarity=0.775  Sum_probs=23.1

Q ss_pred             HHHhhhhhhcCCCCCeeccCCcccccC
Q psy12022         82 GLNRHKKYDCGQEPKYQCLYCPYRAKL  108 (143)
Q Consensus        82 ~l~~h~~~h~~~~~~~~C~~C~~~f~~  108 (143)
                      +|..|+++|+|++| |.|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~-~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP-YKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSS-EEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCC-CCCCCCcCeeCc
Confidence            47899999999888 999999999863

...

>PHA00733 hypothetical protein

Probab=98.61  E-value=8.2e-08  Score=59.16  Aligned_cols=57  Identities=21%  Similarity=0.474  Sum_probs=49.0

Q ss_pred             cCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcC
Q psy12022         14 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        14 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      +.+++||.|..|++.|.+...|..|+..+.  .+                    +.|..|++.|.....|..|+...++
T Consensus        68 ~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~--~~--------------------~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         68 SKAVSPYVCPLCLMPFSSSVSLKQHIRYTE--HS--------------------KVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCCCCCccCCCCCCcCCCHHHHHHHHhcCC--cC--------------------ccCCCCCCccCCHHHHHHHHHHhcC
Confidence            345789999999999999999999998652  23                    8999999999999999999987654

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.60  E-value=4.1e-08  Score=73.46  Aligned_cols=97  Identities=19%  Similarity=0.385  Sum_probs=63.3

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCCCCcccCC--CCCCCccc-----cccCCCccccCcccccccC----------
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGE--DFSSWPGE-----KQNHAEMFACDVCGKEYKQ----------   79 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~--~f~~~~~~-----~~~~~~~~~C~~C~~~~~~----------   79 (143)
                      ++.+.|+.|++.|. ...|..|+..+.  .+ +.|.  .+.....+     .+...+++.|+.|++.+..          
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kp-v~CpCg~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EP-LQCPCGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CC-ccCCCCCCcchhHHHhhhhccCCCCceeCCCCCCccccCccccchhhh
Confidence            44578999999995 677899988764  44 4442  11111111     3456677888888877742          


Q ss_pred             hHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhc
Q psy12022         80 KYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        80 ~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      ...|..|.... |.++ +.|..|++.+..+ +|..|+..-|
T Consensus       527 ~s~Lt~HE~~C-G~rt-~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        527 LRGMSEHESIC-GSRT-APCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             hhhHHHHHHhc-CCcc-eEccccCCeeeeh-hHHHHHHHhh
Confidence            24677777765 6666 8888888777655 5667766544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.52  E-value=1.9e-07  Score=69.96  Aligned_cols=68  Identities=21%  Similarity=0.370  Sum_probs=35.6

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCCCcccC----CCCCCC----------ccc----cccCCCccccCcccccccC
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG----EDFSSW----------PGE----KQNHAEMFACDVCGKEYKQ   79 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c----~~f~~~----------~~~----~~~~~~~~~C~~C~~~~~~   79 (143)
                      +++.|+ ||..+ ....|..|+..|++.++ +.|    ..+...          ..+    ...+.+++.|..||+.+..
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kp-i~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRL-ITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVML  553 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCc-eeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeee
Confidence            566666 66543 44666666666666666 555    222100          011    2235566666666666655


Q ss_pred             hHHHHhhhhh
Q psy12022         80 KYGLNRHKKY   89 (143)
Q Consensus        80 ~~~l~~h~~~   89 (143)
                      + .+..|+..
T Consensus       554 r-dm~~H~~~  562 (567)
T PLN03086        554 K-EMDIHQIA  562 (567)
T ss_pred             h-hHHHHHHH
Confidence            4 45555543

>KOG3993|consensus

Probab=98.48  E-value=2.9e-08  Score=70.81  Aligned_cols=85  Identities=18%  Similarity=0.477  Sum_probs=52.7

Q ss_pred             CCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhc--------
Q psy12022         20 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDC--------   91 (143)
Q Consensus        20 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~--------   91 (143)
                      |.|..|...|.+...|.+|...-.....                    |+|++|++.|.=..+|..|+|.|-        
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vE--------------------YrCPEC~KVFsCPANLASHRRWHKPR~eaa~a  327 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVE--------------------YRCPECDKVFSCPANLASHRRWHKPRPEAAKA  327 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEee--------------------ecCCcccccccCchhhhhhhcccCCchhhhhc
Confidence            5566666666666666666544444333                    566666666665555666655441        


Q ss_pred             CC------------------------CCCeeccCCcccccChHHHHhHHhhhccHHH
Q psy12022         92 GQ------------------------EPKYQCLYCPYRAKLRFNLKTHINVKHSYEY  124 (143)
Q Consensus        92 ~~------------------------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  124 (143)
                      +.                        ..-|.|..|++.|.+..-|++|+.+|+....
T Consensus       328 ~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~  384 (500)
T KOG3993|consen  328 GSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPL  384 (500)
T ss_pred             CCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcccc
Confidence            10                        1127888888888888888888888876443

>PHA00616 hypothetical protein

Probab=98.45  E-value=7.3e-08  Score=47.55  Aligned_cols=35  Identities=23%  Similarity=0.366  Sum_probs=29.3

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      ||.|+.||+.|.....+..|++.|+|+++ +.|..-
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~-~~~~~~   35 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK-LTLEYF   35 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc-cceeEE
Confidence            57899999999999999999999988877 877643

>PHA00732 hypothetical protein

Probab=98.39  E-value=2.6e-07  Score=52.00  Aligned_cols=48  Identities=23%  Similarity=0.527  Sum_probs=39.8

Q ss_pred             ccccCcccccccChHHHHhhhhh-hcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKY-DCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~-h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      ||.|..|++.|.+...|..|++. |.   + +.|++|++.|.   .|..|.+.+.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~-~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---L-TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---C-CccCCCCCEeC---ChhhhhcccCC
Confidence            47899999999999999999985 53   3 78999999998   46778876543

>KOG3993|consensus

Probab=98.37  E-value=3.6e-07  Score=65.36  Aligned_cols=111  Identities=23%  Similarity=0.482  Sum_probs=77.3

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCCCccc-C----CCCCCCccc----cc----cCCCccccCcccccccChHHHH
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYH-G----EDFSSWPGE----KQ----NHAEMFACDVCGKEYKQKYGLN   84 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~-c----~~f~~~~~~----~~----~~~~~~~C~~C~~~~~~~~~l~   84 (143)
                      --|+|.+|++.|....+|..|.++|.....-.. -    +.-......    ..    ..+.-|.|.+|++.|.+...|.
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLr  373 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLR  373 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHH
Confidence            369999999999999999999999986643110 0    100000010    00    1223689999999999999999


Q ss_pred             hhhhhhcC------------------------------------------------------------------------
Q psy12022         85 RHKKYDCG------------------------------------------------------------------------   92 (143)
Q Consensus        85 ~h~~~h~~------------------------------------------------------------------------   92 (143)
                      .|+..|+.                                                                        
T Consensus       374 KHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg  453 (500)
T KOG3993|consen  374 KHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLG  453 (500)
T ss_pred             HhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCCCCCCCcccCCCCCcccccc
Confidence            99765530                                                                        


Q ss_pred             --CCCCeeccCCcccccChHHHHhHHhhhccHHHHHHHH
Q psy12022         93 --QEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIIL  129 (143)
Q Consensus        93 --~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  129 (143)
                        ++ .|.|.+|...|.....|.+|....|..+.-.++.
T Consensus       454 ~~~q-~f~~ky~~atfyss~~ltrhin~~Hpse~rqv~l  491 (500)
T KOG3993|consen  454 IAEQ-GFTCKYCPATFYSSPGLTRHINKCHPSELRQVAL  491 (500)
T ss_pred             chhh-ccccccchHhhhcCcchHhHhhhcChHHhhhhHH
Confidence              01 2677788888888888889988888877655543

>PHA00616 hypothetical protein

Probab=98.23  E-value=3.1e-07  Score=45.33  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=27.7

Q ss_pred             CCCCCccccccCChhHHhcccccccCCCC
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ||+|..||+.|.++++|..|++.|.+.++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc
Confidence            79999999999999999999999999987

>PHA00732 hypothetical protein

Probab=98.14  E-value=2e-06  Score=48.45  Aligned_cols=47  Identities=32%  Similarity=0.689  Sum_probs=38.6

Q ss_pred             CCCCCccccccCChhHHhccccc-ccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhc
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKY-DCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~   91 (143)
                      ||.|..|++.|.+...|..|++. |.   +                    +.|+.|++.|.+   +..|.+...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~--------------------~~C~~CgKsF~~---l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---L--------------------TKCPVCNKSYRR---LNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---C--------------------CccCCCCCEeCC---hhhhhcccC
Confidence            68999999999999999999874 43   2                    579999999984   667876553

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.12  E-value=5.6e-06  Score=43.27  Aligned_cols=52  Identities=29%  Similarity=0.522  Sum_probs=39.3

Q ss_pred             ccccCcccccccChHHHHhhhhhhc-CCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDC-GQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~-~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      .|.||.|++. .+...|..|....+ .+...+.|++|...+.  .+|..|+...|+
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            3899999994 55678999987544 4333489999998644  489999988774

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.11  E-value=2.8e-06  Score=36.31  Aligned_cols=22  Identities=32%  Similarity=0.585  Sum_probs=15.9

Q ss_pred             eeccCCcccccChHHHHhHHhh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINV  118 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~  118 (143)
                      |.|..|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5677777777777777777765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.03  E-value=1.4e-06  Score=38.47  Aligned_cols=26  Identities=35%  Similarity=0.943  Sum_probs=19.9

Q ss_pred             HHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccC
Q psy12022         34 GLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ   79 (143)
Q Consensus        34 ~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~   79 (143)
                      +|..|++.|.++++                    |.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~--------------------~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP--------------------YKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSS--------------------EEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCC--------------------CCCCCCcCeeCc
Confidence            36677777776666                    999999999863

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.02  E-value=5.9e-06  Score=35.41  Aligned_cols=24  Identities=25%  Similarity=0.627  Sum_probs=16.6

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |.|++|+..|.....|..|+.++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567778888888888888877664

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.93  E-value=9e-06  Score=36.12  Aligned_cols=26  Identities=19%  Similarity=0.262  Sum_probs=20.9

Q ss_pred             CeeccCCcccccChHHHHhHHhhhcc
Q psy12022         96 KYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      +|.|..|+..|.....|..|++.|++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            47888888888888888888887654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.87  E-value=8.7e-06  Score=34.72  Aligned_cols=23  Identities=35%  Similarity=0.907  Sum_probs=21.1

Q ss_pred             cccCcccccccChHHHHhhhhhh
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYD   90 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h   90 (143)
                      |+|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.75  E-value=4.2e-05  Score=39.95  Aligned_cols=52  Identities=23%  Similarity=0.408  Sum_probs=38.0

Q ss_pred             CCCCCccccccCChhHHhccccc-ccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcC
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKY-DCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      .|.|+.|++ ..+...|..|... |....                   +.+.||+|...+.  ..|..|+..+++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~-------------------~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSES-------------------KNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCC-------------------CCccCCCchhhhh--hHHHHHHHHhcC
Confidence            589999999 5667889999754 44332                   2389999998654  378889887653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.75  E-value=9.7e-06  Score=36.01  Aligned_cols=26  Identities=38%  Similarity=0.884  Sum_probs=23.6

Q ss_pred             CCCCCccccccCChhHHhcccccccC
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKYDCG   44 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~h~~   44 (143)
                      ||+|..|++.|.+...|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999988753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.56  E-value=5.5e-05  Score=32.24  Aligned_cols=24  Identities=33%  Similarity=0.847  Sum_probs=19.8

Q ss_pred             cccCcccccccChHHHHhhhhhhc
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~   91 (143)
                      |.|+.|++.|.+...|..|+..++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            579999999999999999998764

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.45  E-value=0.00012  Score=42.82  Aligned_cols=24  Identities=25%  Similarity=0.493  Sum_probs=0.0

Q ss_pred             CCCccccccCChhHHhcccccccC
Q psy12022         21 ACDVCGKEYKQKYGLNRHKKYDCG   44 (143)
Q Consensus        21 ~C~~C~~~f~~~~~l~~h~~~h~~   44 (143)
                      +|..|+..|.+...|..|+....+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~   24 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHG   24 (100)
T ss_dssp             ------------------------
T ss_pred             Cccccccccccccccccccccccc
Confidence            488999999999999999854443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.38  E-value=9.7e-05  Score=37.38  Aligned_cols=35  Identities=20%  Similarity=0.349  Sum_probs=21.5

Q ss_pred             hcCCCCCeeccCCcccccChHHHHhHHhhhccHHH
Q psy12022         90 DCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEY  124 (143)
Q Consensus        90 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  124 (143)
                      +..+.+|-.|++|+..+....+|++|+.+.|+.+.
T Consensus        18 ~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   18 KSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            33334448888888888888888888888776543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.29  E-value=0.00025  Score=30.44  Aligned_cols=24  Identities=38%  Similarity=0.858  Sum_probs=15.7

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |+|..|+.... ...|..|++++|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            56777777766 6677777777653

>smart00355 ZnF_C2H2 zinc finger

Probab=97.24  E-value=0.00024  Score=30.63  Aligned_cols=23  Identities=30%  Similarity=0.530  Sum_probs=17.8

Q ss_pred             eeccCCcccccChHHHHhHHhhh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            46788888888888888887754

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.19  E-value=0.00018  Score=50.19  Aligned_cols=23  Identities=39%  Similarity=0.876  Sum_probs=20.9

Q ss_pred             CCCCCCCc--cccccCChhHHhccc
Q psy12022         17 AEMFACDV--CGKEYKQKYGLNRHK   39 (143)
Q Consensus        17 ~~~~~C~~--C~~~f~~~~~l~~h~   39 (143)
                      +|||+|+.  |.+.+.+...|.-|+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~  371 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHM  371 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhh
Confidence            48999997  999999999999886

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.04  E-value=0.00022  Score=49.87  Aligned_cols=53  Identities=34%  Similarity=0.611  Sum_probs=42.4

Q ss_pred             CCCccccCc--ccccccChHHHHhhhhhhc-------------------CCCCCeeccCCcccccChHHHHhHHh
Q psy12022         64 HAEMFACDV--CGKEYKQKYGLNRHKKYDC-------------------GQEPKYQCLYCPYRAKLRFNLKTHIN  117 (143)
Q Consensus        64 ~~~~~~C~~--C~~~~~~~~~l~~h~~~h~-------------------~~~~~~~C~~C~~~f~~~~~l~~H~~  117 (143)
                      +++||+|++  |.+.+.+...|.-|+.--+                   .++| |.|.+|++.++....|+-|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KP-YrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKP-YRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCc-eeccccchhhccCccceeccc
Confidence            359999987  9999999999998875211                   1245 999999999999988887765

>smart00355 ZnF_C2H2 zinc finger

Probab=97.03  E-value=0.00034  Score=30.13  Aligned_cols=24  Identities=33%  Similarity=0.748  Sum_probs=21.3

Q ss_pred             CCCCccccccCChhHHhccccccc
Q psy12022         20 FACDVCGKEYKQKYGLNRHKKYDC   43 (143)
Q Consensus        20 ~~C~~C~~~f~~~~~l~~h~~~h~   43 (143)
                      |.|..|++.|.+...|..|+..|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999987554

>PRK04860 hypothetical protein; Provisional

Probab=96.89  E-value=0.00056  Score=43.80  Aligned_cols=39  Identities=21%  Similarity=0.551  Sum_probs=33.2

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChH
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRF  110 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~  110 (143)
                      +|.|. |+.   ....+..|.+++.++++ |.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~-YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAV-YRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCcc-EECCCCCceeEEec
Confidence            68998 987   56678899999999888 99999999887654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.85  E-value=0.0012  Score=28.48  Aligned_cols=22  Identities=18%  Similarity=0.413  Sum_probs=17.0

Q ss_pred             eeccCCcccccChHHHHhHHhh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINV  118 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~  118 (143)
                      |.|.+|+..|.....|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            5678888888888888888764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.69  E-value=0.0016  Score=33.07  Aligned_cols=31  Identities=26%  Similarity=0.513  Sum_probs=22.5

Q ss_pred             CCccccCcccccccChHHHHhhhhhhcCCCC
Q psy12022         65 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   95 (143)
Q Consensus        65 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~   95 (143)
                      +.|..|++|+..+.+..+|..|+.+.++.+|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3468999999999999999999998888665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.51  E-value=0.0024  Score=28.14  Aligned_cols=22  Identities=36%  Similarity=0.751  Sum_probs=20.4

Q ss_pred             CCCCccccccCChhHHhccccc
Q psy12022         20 FACDVCGKEYKQKYGLNRHKKY   41 (143)
Q Consensus        20 ~~C~~C~~~f~~~~~l~~h~~~   41 (143)
                      |.|..|++.|.+...+..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6899999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.44  E-value=0.0008  Score=29.02  Aligned_cols=23  Identities=30%  Similarity=0.811  Sum_probs=20.5

Q ss_pred             CCCCccccccCChhHHhcccccc
Q psy12022         20 FACDVCGKEYKQKYGLNRHKKYD   42 (143)
Q Consensus        20 ~~C~~C~~~f~~~~~l~~h~~~h   42 (143)
                      |.|..|+..|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57999999999999999998754

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.35  E-value=0.0029  Score=26.98  Aligned_cols=24  Identities=29%  Similarity=0.497  Sum_probs=18.6

Q ss_pred             cccCcccccccChHHHHhhhhhhcC
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      |.|+.|++... ...|..|++.+++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            57999999988 8899999998753

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.09  E-value=0.0031  Score=27.76  Aligned_cols=22  Identities=23%  Similarity=0.377  Sum_probs=14.7

Q ss_pred             eeccCCcccccChHHHHhHHhh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINV  118 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~  118 (143)
                      |.|..|++.|.....|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777666653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.26  E-value=0.017  Score=24.93  Aligned_cols=19  Identities=21%  Similarity=0.319  Sum_probs=10.5

Q ss_pred             eccCCcccccChHHHHhHHh
Q psy12022         98 QCLYCPYRAKLRFNLKTHIN  117 (143)
Q Consensus        98 ~C~~C~~~f~~~~~l~~H~~  117 (143)
                      .|..|++.| ..+.|.+|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            456666666 4445555554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.38  E-value=0.042  Score=25.47  Aligned_cols=22  Identities=14%  Similarity=0.427  Sum_probs=18.9

Q ss_pred             eeccCCcccccChHHHHhHHhh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINV  118 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~  118 (143)
                      |-|.+|+..|.....+..|+..
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             eEccccCCccCCHHHHHHHHCh
Confidence            8899999999988888888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PRK04860 hypothetical protein; Provisional

Probab=94.08  E-value=0.017  Score=37.12  Aligned_cols=38  Identities=24%  Similarity=0.665  Sum_probs=29.5

Q ss_pred             CCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccCh
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQK   80 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~   80 (143)
                      +|.|. |+.   ....+..|.+++.+..+                    |.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~--------------------YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAV--------------------YRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCcc--------------------EECCCCCceeEEe
Confidence            68897 887   55667788888887776                    8999998877543

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.05  E-value=0.083  Score=24.39  Aligned_cols=24  Identities=33%  Similarity=0.895  Sum_probs=17.1

Q ss_pred             cccCcccccccChHHHHhhhhhhcCCCCCeeccCCcc
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPY  104 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~  104 (143)
                      |.|..||..+....            .+ +.|++|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~-~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------AP-WVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CC-CcCcCCCC
Confidence            67888887765443            34 88999985

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG1146|consensus

Probab=91.34  E-value=0.26  Score=41.29  Aligned_cols=66  Identities=21%  Similarity=0.390  Sum_probs=50.5

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhc-------------------------CCCCCeeccCCcccccChHHHHhHH
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDC-------------------------GQEPKYQCLYCPYRAKLRFNLKTHI  116 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~-------------------------~~~~~~~C~~C~~~f~~~~~l~~H~  116 (143)
                      +...+.++|+.|+..|.....|..|++.-+                         +.++ |.|..|+..+....+|..|+
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p-~~C~~C~~stttng~Lsihl  538 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP-YPCRACNYSTTTNGNLSIHL  538 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc-ccceeeeeeeecchHHHHHH
Confidence            444567999999999999999999998711                         1134 89999999999999999998


Q ss_pred             hhhccHHHHHHH
Q psy12022        117 NVKHSYEYIRII  128 (143)
Q Consensus       117 ~~~~~~~~~~~~  128 (143)
                      +...........
T Consensus       539 qS~~h~~~lee~  550 (1406)
T KOG1146|consen  539 QSDLHRNELEEA  550 (1406)
T ss_pred             HHHhhHHHHHHH
Confidence            865443333333

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=91.10  E-value=0.21  Score=33.69  Aligned_cols=35  Identities=20%  Similarity=0.287  Sum_probs=25.5

Q ss_pred             CCCCCeeccCCcccccChHHHHhHHhhhccHHHHHH
Q psy12022         92 GQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRI  127 (143)
Q Consensus        92 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  127 (143)
                      ++.+ |.|..|++.|.-..-+.+|+...|.++.-.+
T Consensus        74 ~~~K-~~C~lc~KlFkg~eFV~KHI~nKH~e~ve~~  108 (214)
T PF04959_consen   74 DEDK-WRCPLCGKLFKGPEFVRKHIFNKHPEKVEEV  108 (214)
T ss_dssp             SSEE-EEE-SSS-EESSHHHHHHHHHHH-HHHHHHH
T ss_pred             cCCE-ECCCCCCcccCChHHHHHHHhhcCHHHHHHH
Confidence            3446 9999999999999999999999898764433

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.09  E-value=0.064  Score=27.76  Aligned_cols=37  Identities=16%  Similarity=0.411  Sum_probs=29.1

Q ss_pred             CCCCCCcccCCCCCCCCCccccccCChhHHhcccccc
Q psy12022          6 FSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYD   42 (143)
Q Consensus         6 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h   42 (143)
                      +....-+..-||..++|+-||..|....++..|.+..
T Consensus         4 ~KA~Kv~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKa   40 (65)
T COG4049           4 LKAIKVRDRDGEEFLRCPRCGMVFRRRKDYIRHVNKA   40 (65)
T ss_pred             ceeeEeeccCCceeeeCCchhHHHHHhHHHHHHhhHH
Confidence            3334445667888999999999999999999997543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.21  E-value=0.16  Score=26.30  Aligned_cols=29  Identities=28%  Similarity=0.477  Sum_probs=19.8

Q ss_pred             CCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         92 GQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        92 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |+.- +.|+.|+..|....++.+|....|+
T Consensus        14 GE~~-lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          14 GEEF-LRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             Ccee-eeCCchhHHHHHhHHHHHHhhHHhh
Confidence            4444 6777777777777777777766554

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.61  E-value=0.13  Score=37.50  Aligned_cols=57  Identities=23%  Similarity=0.403  Sum_probs=50.8

Q ss_pred             CccccCcccccccChHHHHhhhh--hhcCC--CCCeecc--CCcccccChHHHHhHHhhhccHH
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKK--YDCGQ--EPKYQCL--YCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~--~h~~~--~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      .++.|..|...|.....+..|.+  .|.++  ++ +.|.  .|++.|.+...+..|..+|....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  350 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP-FSCPYSLCGKLFSRNDALKRHILLHTSIS  350 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCc-eeeeccCCCccccccccccCCcccccCCC
Confidence            46889999999999999999999  79887  66 9999  79999999999999999887654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=88.60  E-value=0.36  Score=27.82  Aligned_cols=24  Identities=25%  Similarity=0.683  Sum_probs=19.8

Q ss_pred             ccccCcccccccChHHHHhhhhhh
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYD   90 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h   90 (143)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            478999999999999999999864

>KOG2231|consensus

Probab=88.35  E-value=0.43  Score=37.44  Aligned_cols=49  Identities=22%  Similarity=0.415  Sum_probs=37.8

Q ss_pred             cccCcccccccChHHHHhhhhhhcCCCCCeeccCC------cccccChHHHHhHHhhhcc
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC------PYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C------~~~f~~~~~l~~H~~~~~~  121 (143)
                      -.|..|...|.....+..|++.++     |-|..|      +..|....+|..|.+..|-
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~Hf  237 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHF  237 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce-----eheeecCcccccchhcccchHHHHHhhhcCc
Confidence            468899999999999999998765     444445      4567777889999888773

>KOG1146|consensus

Probab=87.81  E-value=0.63  Score=39.17  Aligned_cols=105  Identities=19%  Similarity=0.385  Sum_probs=71.9

Q ss_pred             CCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccc-----cccCCCccccCcccccccChHHHHhhhhh
Q psy12022         15 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGE-----KQNHAEMFACDVCGKEYKQKYGLNRHKKY   89 (143)
Q Consensus        15 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~-----~~~~~~~~~C~~C~~~~~~~~~l~~h~~~   89 (143)
                      ...+-|.|..|+..|.....|-.||+.-..+-..-.|..+......     .-.+.++|.|..|..++.....|..|+..
T Consensus       461 S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  461 SFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             cccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            3347899999999999999999999863333221334333222221     23456789999999999998888888752


Q ss_pred             hc-------------------------------------C-----CCCCeeccCCcccccChHHHHhHHhhh
Q psy12022         90 DC-------------------------------------G-----QEPKYQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        90 h~-------------------------------------~-----~~~~~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      ..                                     |     .++.+.|.+|+..-+-..+|+.|+..-
T Consensus       541 ~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss  612 (1406)
T KOG1146|consen  541 DLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTAS  612 (1406)
T ss_pred             HhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccC
Confidence            20                                     0     134588999998877777777777643

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=87.58  E-value=0.29  Score=22.76  Aligned_cols=24  Identities=29%  Similarity=0.677  Sum_probs=16.3

Q ss_pred             cccCcccccccChHHHHhhhhhhcCCCCCeeccCCcc
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPY  104 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~  104 (143)
                      |.|..||..+...             .+|..|++|+.
T Consensus         3 ~~C~~CG~i~~g~-------------~~p~~CP~Cg~   26 (34)
T cd00729           3 WVCPVCGYIHEGE-------------EAPEKCPICGA   26 (34)
T ss_pred             EECCCCCCEeECC-------------cCCCcCcCCCC
Confidence            7788888765432             23378888885

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=87.18  E-value=0.56  Score=24.71  Aligned_cols=32  Identities=28%  Similarity=0.706  Sum_probs=20.8

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcc
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPY  104 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~  104 (143)
                      .|.|+.||........-  . |.+ + .+ |.|+.||.
T Consensus        27 ~F~CPnCGe~~I~Rc~~--C-Rk~-g-~~-Y~Cp~CGF   58 (61)
T COG2888          27 KFPCPNCGEVEIYRCAK--C-RKL-G-NP-YRCPKCGF   58 (61)
T ss_pred             EeeCCCCCceeeehhhh--H-HHc-C-Cc-eECCCcCc
Confidence            38999999765554321  1 112 3 67 99999984

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=86.98  E-value=0.59  Score=22.13  Aligned_cols=34  Identities=15%  Similarity=0.402  Sum_probs=23.2

Q ss_pred             cccCcccccccChHHHHhhhhhhcCCCCCeeccCCccccc
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAK  107 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~  107 (143)
                      ..|+.|+..|.-..+-     +..+... .+|..|+..|.
T Consensus         3 i~CP~C~~~f~v~~~~-----l~~~~~~-vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDK-----LPAGGRK-VRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHHH-----cccCCcE-EECCCCCcEee
Confidence            4689998888766542     1123345 89999998774

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=86.68  E-value=0.21  Score=33.72  Aligned_cols=44  Identities=34%  Similarity=0.619  Sum_probs=28.2

Q ss_pred             CccccCcccccccChHHHHhhhhh---h-------cCCCC----CeeccCCcccccCh
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKY---D-------CGQEP----KYQCLYCPYRAKLR  109 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~---h-------~~~~~----~~~C~~C~~~f~~~  109 (143)
                      +...||.|+..|.+........+.   .       .+.+|    +.+|+.||.+|...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            457899999999876554444432   1       12233    24899999876543

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=86.46  E-value=0.82  Score=22.38  Aligned_cols=24  Identities=42%  Similarity=0.689  Sum_probs=14.9

Q ss_pred             eeccCCcccccCh----HHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLR----FNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~----~~l~~H~~~~~  120 (143)
                      ..|..|+..+...    +.|..|++..|
T Consensus        17 a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   17 AKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             EEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            7888888877653    67888885433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PHA00626 hypothetical protein

Probab=85.58  E-value=0.33  Score=25.21  Aligned_cols=15  Identities=27%  Similarity=0.687  Sum_probs=10.9

Q ss_pred             CCCeeccCCcccccCh
Q psy12022         94 EPKYQCLYCPYRAKLR  109 (143)
Q Consensus        94 ~~~~~C~~C~~~f~~~  109 (143)
                      +. |+|..||..|+..
T Consensus        22 nr-YkCkdCGY~ft~~   36 (59)
T PHA00626         22 DD-YVCCDCGYNDSKD   36 (59)
T ss_pred             cc-eEcCCCCCeechh
Confidence            45 8888888877543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=85.40  E-value=0.43  Score=34.85  Aligned_cols=62  Identities=24%  Similarity=0.516  Sum_probs=48.4

Q ss_pred             CCCCCCccccccCChhHHhcccc--cccCC--CCcccCCCCCCCccccccCCCccccC--cccccccChHHHHhhhhhhc
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKK--YDCGQ--EPKYHGEDFSSWPGEKQNHAEMFACD--VCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~--~h~~~--~~~~~c~~f~~~~~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~   91 (143)
                      .++.|..|...|.....+..|..  .|.++  .+                    +.|+  .|++.|.....+..|...|.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~--------------------~~~p~~~~~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP--------------------FSCPYSLCGKLFSRNDALKRHILLHT  347 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCc--------------------eeeeccCCCccccccccccCCccccc
Confidence            46888889999999988888888  56666  44                    7888  78999988888888888887


Q ss_pred             CCCCCeecc
Q psy12022         92 GQEPKYQCL  100 (143)
Q Consensus        92 ~~~~~~~C~  100 (143)
                      +..+ +.+.
T Consensus       348 ~~~~-~~~~  355 (467)
T COG5048         348 SISP-AKEK  355 (467)
T ss_pred             CCCc-cccc
Confidence            7554 5444

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=84.24  E-value=0.57  Score=30.30  Aligned_cols=24  Identities=33%  Similarity=0.760  Sum_probs=18.0

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcc
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPY  104 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~  104 (143)
                      -|.|+.||+.             +.| .+|-+|++||.
T Consensus       134 ~~vC~vCGy~-------------~~g-e~P~~CPiCga  157 (166)
T COG1592         134 VWVCPVCGYT-------------HEG-EAPEVCPICGA  157 (166)
T ss_pred             EEEcCCCCCc-------------ccC-CCCCcCCCCCC
Confidence            5899999764             345 45599999983

>KOG2186|consensus

Probab=84.06  E-value=1.1  Score=30.97  Aligned_cols=54  Identities=20%  Similarity=0.451  Sum_probs=40.1

Q ss_pred             cccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHH
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYI  125 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  125 (143)
                      |.|..||.+..-+ .+..|+....+ .. |.|.-|+..|-. ..+..|..=-+..+.|
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~-fSCIDC~k~F~~-~sYknH~kCITEaQKY   57 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AY-FSCIDCGKTFER-VSYKNHTKCITEAQKY   57 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-Ce-eEEeeccccccc-chhhhhhhhcchHHHh
Confidence            6789999888765 45669988877 55 999999999966 6777887654444433

>KOG2893|consensus

Probab=84.04  E-value=0.34  Score=33.05  Aligned_cols=44  Identities=23%  Similarity=0.480  Sum_probs=35.4

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhH
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTH  115 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H  115 (143)
                      ++| |=+|++.|.....|..|++.    +. |+|.+|-+...+.-.|..|
T Consensus        10 kpw-cwycnrefddekiliqhqka----kh-fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQKA----KH-FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhhh----cc-ceeeeehhhhccCCCceee
Confidence            455 77899999999999998874    34 9999999877777677777

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=83.78  E-value=0.45  Score=30.40  Aligned_cols=19  Identities=21%  Similarity=0.401  Sum_probs=14.0

Q ss_pred             cccCcccccccChHHHHhh
Q psy12022         68 FACDVCGKEYKQKYGLNRH   86 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h   86 (143)
                      +.|+.||++|.+...+..-
T Consensus        29 ~~c~~c~~~f~~~e~~~~~   47 (154)
T PRK00464         29 RECLACGKRFTTFERVELV   47 (154)
T ss_pred             eeccccCCcceEeEeccCc
Confidence            7899999998876555433

>KOG4173|consensus

Probab=83.03  E-value=0.41  Score=31.91  Aligned_cols=53  Identities=25%  Similarity=0.379  Sum_probs=39.4

Q ss_pred             cccCcccccccChHHHHhhhhhhc---------CCCCCeeccC--CcccccChHHHHhHHhhhc
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDC---------GQEPKYQCLY--CPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~---------~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~  120 (143)
                      ..|..|.+.|++..-|..|+.-.+         .++.-|+|-+  |+..|.+....+.|+-.-|
T Consensus       107 ~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  107 NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhc
Confidence            369999999999988888886433         1133378875  8889988888888876554

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=82.20  E-value=1.2  Score=20.92  Aligned_cols=34  Identities=15%  Similarity=0.220  Sum_probs=23.0

Q ss_pred             cccCcccccccChHHHHhhhhhhcCCCCCeeccCCccccc
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAK  107 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~  107 (143)
                      ..|+.|+..|.-.....     -..... .+|..|+..|.
T Consensus         3 i~Cp~C~~~y~i~d~~i-----p~~g~~-v~C~~C~~~f~   36 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEKI-----PPKGRK-VRCSKCGHVFF   36 (36)
T ss_pred             EECCCCCCEEeCCHHHC-----CCCCcE-EECCCCCCEeC
Confidence            46888988887765532     122245 89999998773

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=82.00  E-value=1.4  Score=26.24  Aligned_cols=25  Identities=24%  Similarity=0.650  Sum_probs=21.3

Q ss_pred             eec----cCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQC----LYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C----~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|    ..|+..+.....+.+|++.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            888    8888888888889999888774

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR00622 ssl1 transcription factor ssl1

Probab=81.66  E-value=2.4  Score=25.57  Aligned_cols=92  Identities=15%  Similarity=0.144  Sum_probs=51.9

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCCCCCe
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKY   97 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~   97 (143)
                      -|-.|+.||-+.....+|.+.........      .|......  .......|--|...|........  ..-..... |
T Consensus        14 LP~~CpiCgLtLVss~HLARSyHHLfPl~------~f~ev~~~--~~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~-y   82 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSYHHLFPLK------AFQEIPLE--EYNGSRFCFGCQGPFPKPPVSPF--DELKDSHR-Y   82 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhhhccCCCc------cccccccc--ccCCCCcccCcCCCCCCcccccc--cccccccc-e
Confidence            47789999988888777765422111111      12111100  01111348888888875431110  00112234 9


Q ss_pred             eccCCcccccChHHHHhHHhhhc
Q psy12022         98 QCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        98 ~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      .|..|...|-..-+.-.|...|.
T Consensus        83 ~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        83 VCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             eCCCCCCccccccchhhhhhccC
Confidence            99999999988888888887764

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=81.05  E-value=1.1  Score=21.06  Aligned_cols=34  Identities=12%  Similarity=0.215  Sum_probs=22.2

Q ss_pred             cccCcccccccChHHHHhhhhhhcCCCCCeeccCCccccc
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAK  107 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~  107 (143)
                      +.|+.|+..|.-.....     ...... ..|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~-----~~~~~~-v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL-----GANGGK-VRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHc-----CCCCCE-EECCCCCCEEE
Confidence            57999998877654432     112224 88999998764

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=80.78  E-value=1.3  Score=21.89  Aligned_cols=26  Identities=35%  Similarity=0.919  Sum_probs=18.1

Q ss_pred             cccCcccccccChHHHHhhhhhhcCCCCCeeccCCccc
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYR  105 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~  105 (143)
                      |.|..||..|...           ...+ ..|+.||..
T Consensus         3 Y~C~~Cg~~~~~~-----------~~~~-irC~~CG~r   28 (44)
T smart00659        3 YICGECGRENEIK-----------SKDV-VRCRECGYR   28 (44)
T ss_pred             EECCCCCCEeecC-----------CCCc-eECCCCCce
Confidence            7788888876643           2244 889999854

present in RNA polymerase I, II and III

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	143
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 30/114 (26%)
Query: 10  PGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFA 69
           PGEK      +AC  CGK + +   L  H++   G++P                    + 
Sbjct: 17  PGEK-----PYACPECGKSFSRSDHLAEHQRTHTGEKP--------------------YK 51
Query: 70  CDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC----PYRAKLRFNLKTHINVK 119
           C  CGK +  K  L RH++   G++P Y+C  C      RA LR + +TH   K
Sbjct: 52  CPECGKSFSDKKDLTRHQRTHTGEKP-YKCPECGKSFSQRANLRAHQRTHTGEK 104

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 20/69 (28%)
Query: 20 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
          F C +C + + Q  GLN+H +   G++P                    FACD+CG+++  
Sbjct: 35 FQCRICMRNFSQHTGLNQHIRTHTGEKP--------------------FACDICGRKFAT 74
Query: 80 KYGLNRHKK 88
           +  +RH K
Sbjct: 75 LHTRDRHTK 83

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	143
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-04

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 46.2 bits (110), Expect = 5e-08
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 17/69 (24%)

Query: 20 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
            C++CG   +QK  LN H++         H    +      +     F C+ CGK +++
Sbjct: 8  LQCEICGFTCRQKASLNWHQRK--------H----AETVAALR-----FPCEFCGKRFEK 50

Query: 80 KYGLNRHKK 88
             +  H+ 
Sbjct: 51 PDSVAAHRS 59

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.2 bits (97), Expect = 4e-06
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 4/59 (6%)

Query: 68  FACDVCGKEYKQKYGLNRHKK---YDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE 123
             C++CG   +QK  LN H++           + C +C  R +   ++  H +  H   
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHRSKSHPAL 65

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 17/83 (20%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
           +AC  C K ++QK  L+ H K       +YH  +F             F C  CGK + +
Sbjct: 16  YACSHCDKTFRQKQLLDMHFK-------RYHDPNFVPAA---------FVCSKCGKTFTR 59

Query: 80  KYGLNRHKKYDCGQEPKYQCLYC 102
           +  + RH     G +   +    
Sbjct: 60  RNTMARHADNCAGPDG-VEGENS 81

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.3 bits (95), Expect = 4e-05
 Identities = 13/68 (19%), Positives = 18/68 (26%), Gaps = 11/68 (16%)

Query: 20 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
               C + +   + L  H   +    P         W            C   GK +K 
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGP-EQNNHVCYWEE----------CPREGKSFKA 74

Query: 80 KYGLNRHK 87
          KY L  H 
Sbjct: 75 KYKLVNHI 82

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.4 bits (91), Expect = 5e-05
 Identities = 15/94 (15%), Positives = 24/94 (25%), Gaps = 14/94 (14%)

Query: 7  SSWPGEKQNHAEM-FACDVCGKEYKQKYGLNRH------------KKYDCGQEPKYHGED 53
          S             F C  C   Y     L  H            +  +   +       
Sbjct: 6  SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 54 FSSWPGEKQNHAE-MFACDVCGKEYKQKYGLNRH 86
           S    E +  A+ +  C  CG  ++    L+ H
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 21/84 (25%)

Query: 20  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
            AC++CGK ++  Y LNRHK    G++P                    ++C VCG  +K+
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKP--------------------YSCPVCGLRFKR 47

Query: 80  KYGLNRHKKYDCGQEPK-YQCLYC 102
           K  ++ H +   G   K Y C  C
Sbjct: 48  KDRMSYHVRSHDGSVGKPYICQSC 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 68  FACDVCGKEYKQKYGLNRHKKYDCGQEPK-YQCLYCPYRAKLRFNLKTHINVKHSYE 123
           + C +C   + Q   +  H      +    + C +C      + +L  H+  +HSY 
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS 72

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.9 bits (89), Expect = 7e-05
 Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 18/69 (26%)

Query: 20 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ 79
          + C VC + Y       RH          +           K     ++ C  C KE+ +
Sbjct: 11 YRCKVCSRVYTHISNFCRH------YVTSHKR-------NVK-----VYPCPFCFKEFTR 52

Query: 80 KYGLNRHKK 88
          K  +  H K
Sbjct: 53 KDNMTAHVK 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 68  FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTH 115
             C  C      K  L  H++  C   P ++C YC +  K   NL  H
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKH 56

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	143
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.86
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.85
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.84
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.84
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.84
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.82
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.81
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.81
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.79
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.78
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.78
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.77
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.77
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.77
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.76
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.76
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.74
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.73
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.72
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.69
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.68
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.66
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.66
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.63
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.63
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.62
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.61
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.6
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.6
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.59
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.59
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.58
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.57
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.57
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.57
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.56
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.56
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.54
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.53
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.53
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.52
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.5
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.48
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.47
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.47
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.47
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.46
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.46
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.46
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.45
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.45
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.44
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.44
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.44
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.43
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.43
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.42
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.41
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.41
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.4
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.39
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.39
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.38
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.38
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.37
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.36
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.34
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.33
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.32
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.3
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.26
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.26
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.21
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.21
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.19
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.17
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.17
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.16
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.15
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.14
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.13
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.03
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.03
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.01
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.01
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.0
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.99
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.98
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.98
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.98
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.97
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.97
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.96
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.96
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.95
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.95
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.92
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.92
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.92
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.91
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.91
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.89
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.88
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.88
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.88
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.86
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.83
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.83
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.83
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.81
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.8
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.78
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.78
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.77
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.76
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.72
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.71
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.7
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.66
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.64
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.61
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.61
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.57
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.54
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.52
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.51
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.5
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.44
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.43
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.43
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.42
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.41
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.4
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.4
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.39
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.39
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.39
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.39
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.38
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.38
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.37
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.37
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.35
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.35
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.35
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.34
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.34
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.33
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.33
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.33
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.32
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.3
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.62
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.28
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.28
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.27
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.59
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.26
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.26
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.26
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.57
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.25
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.24
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.54
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.52
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.16
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.15
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.42
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.05
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.89
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.76
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.36
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.28
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.23
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.21
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.09
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.34
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.15
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.33
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.86
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	92.1
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	90.09
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	88.23
2ct5_A	73	Zinc finger BED domain containing protein 1; DREF	88.19
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	87.44
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	87.4
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	86.83
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	85.98
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	85.34
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	81.06
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	81.05
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	80.43
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	80.43
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	80.21

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=2.3e-24  Score=133.37  Aligned_cols=92  Identities=23%  Similarity=0.376  Sum_probs=86.1

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhh
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYD   90 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h   90 (143)
                      ...|+|+++|.|+.|++.|.....|..|++.|.++++                    |.|++|++.|.....|..|+++|
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~--------------------~~C~~C~k~F~~~~~L~~H~~~H   73 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKK--------------------YPCRYCEKVFPLAEYRTKHEIHH   73 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSC--------------------EECSSSSCEESSHHHHHHHHHHH
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCC--------------------eeCCccCeecccccchhhhcccc
Confidence            3467899999999999999999999999999888877                    99999999999999999999999


Q ss_pred             cCCCCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         91 CGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        91 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      +++++ |.|.+|++.|.....|..|++++|+++
T Consensus        74 ~~~k~-~~C~~C~k~F~~~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           74 TGERR-YQCLACGKSFINYQFMSSHIKSVHSQD  105 (133)
T ss_dssp             HTCCC-EEESSSCCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCcc-ccCCCCCCCcCCHHHHHHHhHHhcCCC
Confidence            99888 999999999999999999999999765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=1.1e-21  Score=114.63  Aligned_cols=90  Identities=24%  Similarity=0.614  Sum_probs=83.8

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcC
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      ++.++++|.|..|++.|.+...|..|++.|.+..+                    |.|+.|++.|.....|..|++.|++
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~l~~H~~~h~~   61 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP--------------------YKCKTCDYAAADSSSLNKHLRIHSD   61 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCS--------------------EECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCC--------------------EeCCCCCCccCCHHHHHHHHHHhCC
Confidence            35778999999999999999999999998888776                    9999999999999999999999998


Q ss_pred             CCCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         93 QEPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        93 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      +++ |.|.+|++.|.....|..|+++|++++
T Consensus        62 ~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           62 ERP-FKCQICPYASRNSSQLTVHLRSHTGDS   91 (96)
T ss_dssp             CCC-EECSSSSCEESSHHHHHHHHTTCCSCC
T ss_pred             CCC-ccCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            877 999999999999999999999998764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.7e-21  Score=118.68  Aligned_cols=106  Identities=23%  Similarity=0.505  Sum_probs=93.1

Q ss_pred             CCCCCCCCCccccccCChhHHhcccccccCCCCcccC----CCCCCCccc--------cccCCCccccCcccccccChHH
Q psy12022         15 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG----EDFSSWPGE--------KQNHAEMFACDVCGKEYKQKYG   82 (143)
Q Consensus        15 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c----~~f~~~~~~--------~~~~~~~~~C~~C~~~~~~~~~   82 (143)
                      +++++|.|..|++.|.+...|..|++.|.+..+ +.|    ..|.....+        .+.++++|.|++|++.|.....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKP-FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCS-CBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCC-eECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            567899999999999999999999999999888 888    555555442        2467889999999999999999


Q ss_pred             HHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         83 LNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        83 l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      |..|++.|+++++ |.|.+|++.|.....|..|++..|++
T Consensus        82 l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           82 LRLHMVSHTGEMP-YKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHHHSSSCS-EECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHHHcCCCCC-ccCCCccchhCCHHHHHHHHHHHCCC
Confidence            9999999999888 99999999999999999999866654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.85  E-value=2.3e-22  Score=131.16  Aligned_cols=121  Identities=25%  Similarity=0.487  Sum_probs=71.9

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC----CCCCCCccc-----cccCCCccccCcccccccChHHH
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG----EDFSSWPGE-----KQNHAEMFACDVCGKEYKQKYGL   83 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c----~~f~~~~~~-----~~~~~~~~~C~~C~~~~~~~~~l   83 (143)
                      .|.++++|.|..|++.|.+...|..|+..|.+..+ +.|    ..|.....+     .|.++++|.|+.|++.|.+...|
T Consensus        43 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  121 (190)
T 2i13_A           43 THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKP-YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL  121 (190)
T ss_dssp             CC---CCEECTTTCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHH
T ss_pred             HcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCC-ccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHH
Confidence            35566777777777777777777777777776666 665    333333331     35555666666666666666666


Q ss_pred             HhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHHHHHHhhccCc
Q psy12022         84 NRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMP  135 (143)
Q Consensus        84 ~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~  135 (143)
                      ..|++.|+++++ |.|.+|++.|.....|..|+++|++++.+.+..+...+.
T Consensus       122 ~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~  172 (190)
T 2i13_A          122 RAHQRTHTGEKP-YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFS  172 (190)
T ss_dssp             HHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             HHHHHHhCCCCC-eECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccC
Confidence            666666666555 666666666666666666666666555544444444443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.84  E-value=6.2e-23  Score=133.87  Aligned_cols=121  Identities=21%  Similarity=0.451  Sum_probs=61.5

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC----CCCCCCccc-----cccCCCccccCcccccccChHHH
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG----EDFSSWPGE-----KQNHAEMFACDVCGKEYKQKYGL   83 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c----~~f~~~~~~-----~~~~~~~~~C~~C~~~~~~~~~l   83 (143)
                      .+.++++|.|..|++.|.....|..|++.|.+..+ +.|    ..|.....+     .|.++++|.|+.|++.|.+...|
T Consensus        15 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   93 (190)
T 2i13_A           15 LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKP-YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANL   93 (190)
T ss_dssp             ----------------CCSSHHHHHGGGCC---CC-EECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             hcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCC-ccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHH
Confidence            35556666666666666666666666666666655 655    333333321     45556666666666666666666


Q ss_pred             HhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHHHHHHhhccCc
Q psy12022         84 NRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMP  135 (143)
Q Consensus        84 ~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~  135 (143)
                      ..|++.|+++++ |.|.+|++.|.....|..|+++|++++.+.+..+...+.
T Consensus        94 ~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  144 (190)
T 2i13_A           94 RAHQRTHTGEKP-YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFS  144 (190)
T ss_dssp             HHHHHHHHTCCC-EECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             HHHHHhcCCCCC-CcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccC
Confidence            666666666555 666666666666666666666666655554444444443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=2.2e-21  Score=116.11  Aligned_cols=91  Identities=30%  Similarity=0.611  Sum_probs=84.4

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcC
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      .|+++++|.| .|++.|.+...|..|++.|.+..+                    |.|++|++.|.....|..|++.|++
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~l~~H~~~h~~   62 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP--------------------YGCGVCGKKFKMKHHLVGHMKIHTG   62 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS--------------------EECTTTSCEESSSHHHHHHHTTTCC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcC--------------------ccCCCCCcccCCHHHHHHHHHHcCC
Confidence            5889999999 999999999999999998888776                    9999999999999999999999999


Q ss_pred             CCCCeeccCCcccccChHHHHhHHhhhccHHHH
Q psy12022         93 QEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYI  125 (143)
Q Consensus        93 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  125 (143)
                      +++ |.|.+|++.|.....|..|+++|+.....
T Consensus        63 ~~~-~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   94 (110)
T 2csh_A           63 IKP-YECNICAKRFMWRDSFHRHVTSCTKSYEA   94 (110)
T ss_dssp             CCC-EECSSSCCEESCHHHHHHHHHHHHHHHHH
T ss_pred             CCC-eeCCCCcchhcCHHHHHHHHHHccccccc
Confidence            877 99999999999999999999998875433

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.84  E-value=2.5e-21  Score=111.79  Aligned_cols=87  Identities=24%  Similarity=0.573  Sum_probs=78.9

Q ss_pred             CCCCCCCC--ccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCC
Q psy12022         16 HAEMFACD--VCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        16 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      +++||.|.  .|++.|.....|..|++.|.+..+                    |.|+.|++.|.....|..|++.|+++
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~l~~H~~~h~~~   60 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKP--------------------FQCRICMRNFSRSDHLTTHIRTHTGE   60 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC--------------------EECTTTCCEESCHHHHHHHHHHHHCC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCC--------------------ccCCCCCcccCCHHHHHHHHHHcCCC
Confidence            46899998  699999999999999998888776                    99999999999999999999999998


Q ss_pred             CCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         94 EPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      ++ |.|.+|++.|.....|..|+++|++++
T Consensus        61 ~~-~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           61 KP-FACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CC-EECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CC-ccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            88 999999999999999999999998764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.84  E-value=2.4e-21  Score=117.29  Aligned_cols=103  Identities=23%  Similarity=0.537  Sum_probs=88.3

Q ss_pred             CCCCCCCCCc--cccccCChhHHhcccccccCCCCcccCC------CCCCCcc-----ccccCCCccccCcccccccChH
Q psy12022         15 NHAEMFACDV--CGKEYKQKYGLNRHKKYDCGQEPKYHGE------DFSSWPG-----EKQNHAEMFACDVCGKEYKQKY   81 (143)
Q Consensus        15 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~~c~------~f~~~~~-----~~~~~~~~~~C~~C~~~~~~~~   81 (143)
                      +++++|.|..  |++.|.+...|..|++.|.+..+ +.|.      .|.....     ..|.++++|.|+.|++.|....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP-YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCC-EECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCC-ccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            5788999997  99999999999999999998887 7663      3444333     2577888999999999999999


Q ss_pred             HHHhhhhhhcCCCCCeec--cCCcccccChHHHHhHHhhh
Q psy12022         82 GLNRHKKYDCGQEPKYQC--LYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        82 ~l~~h~~~h~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  119 (143)
                      .|..|++.|+++++ |.|  ..|++.|.....|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKP-FSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCC-EECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCC-eeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999998777 999  78999999999999999875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=1.1e-20  Score=112.27  Aligned_cols=92  Identities=21%  Similarity=0.538  Sum_probs=84.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhc
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~   91 (143)
                      .....+++|.|..|++.|.....|..|++.|.+..+                    |.|+.|++.|.....|..|++.|+
T Consensus        10 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~l~~H~~~h~   69 (106)
T 2ee8_A           10 LPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERP--------------------YTCDICHKAFRRQDHLRDHRYIHS   69 (106)
T ss_dssp             CCCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCC--------------------CBCSSSCCBCSCHHHHHHHGGGSC
T ss_pred             CCcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCC--------------------cCCCCccchhCCHHHHHHHHHHhC
Confidence            345677899999999999999999999998888777                    999999999999999999999999


Q ss_pred             CCCCCeeccCCcccccChHHHHhHHhhhccHHH
Q psy12022         92 GQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEY  124 (143)
Q Consensus        92 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  124 (143)
                      ++++ |.|.+|++.|.....|..|+++|++++.
T Consensus        70 ~~~~-~~C~~C~~~f~~~~~L~~H~~~H~~~~~  101 (106)
T 2ee8_A           70 KEKP-FKCQECGKGFCQSRTLAVHKTLHMQTSS  101 (106)
T ss_dssp             CCCT-TSCSSSCCCCSSHHHHHHHHHHTTSCCC
T ss_pred             CCCC-eECCCcCCcccCHHHHHHHHHHhCCCCC
Confidence            9888 9999999999999999999999987653

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.82  E-value=7.5e-21  Score=107.86  Aligned_cols=82  Identities=29%  Similarity=0.639  Sum_probs=77.0

Q ss_pred             CCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCCCCCee
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQ   98 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~   98 (143)
                      ||.|..|++.|.....|..|++.|.+..+                    |.|+.|++.|.....|..|++.|+++++ |.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~   59 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRP--------------------YPCQYCGKRFHQKSDMKKHTFIHTGEKP-HK   59 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCC--------------------EECSSSCCEESSHHHHHHHHHHHHTCCC-EE
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCC--------------------eeCCcCChhhCCHHHHHHHHHHhcCCCC-Cc
Confidence            68999999999999999999998888776                    9999999999999999999999999888 99


Q ss_pred             ccCCcccccChHHHHhHHhhhcc
Q psy12022         99 CLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        99 C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.+|++.|.....|..|+++|++
T Consensus        60 C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           60 CQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCcchhhCChHHHHHHHHhhCC
Confidence            99999999999999999999864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.81  E-value=2.3e-20  Score=113.75  Aligned_cols=106  Identities=23%  Similarity=0.457  Sum_probs=86.1

Q ss_pred             CCCCCCCC--ccccccCChhHHhcccccccCCCCcccC----CCCCCCcc-----ccccCCCccccCc--ccccccChHH
Q psy12022         16 HAEMFACD--VCGKEYKQKYGLNRHKKYDCGQEPKYHG----EDFSSWPG-----EKQNHAEMFACDV--CGKEYKQKYG   82 (143)
Q Consensus        16 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~~c----~~f~~~~~-----~~~~~~~~~~C~~--C~~~~~~~~~   82 (143)
                      ++++|.|.  .|++.|.+...|..|++.| +..+ +.|    ..|.....     ..|.++++|.|+.  |++.|.....
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   79 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRV-HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN   79 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCC-EECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCC-eECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHH
Confidence            45788998  7999999999999999988 6666 777    55555544     2677889999985  9999999999


Q ss_pred             HHhhhhhhcCCCCCeecc--CCcccccChHHHHhHHhhhccHHH
Q psy12022         83 LNRHKKYDCGQEPKYQCL--YCPYRAKLRFNLKTHINVKHSYEY  124 (143)
Q Consensus        83 l~~h~~~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~  124 (143)
                      |..|++.|+++++ |.|.  .|++.|.....|..|+++|++++.
T Consensus        80 l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           80 LRTHVRIHTGDRP-YVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             HHHHHHHHHCCCC-CCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             HHHHHHHhCCCCc-eECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            9999999999888 9996  599999999999999999988764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=4.7e-20  Score=107.42  Aligned_cols=85  Identities=34%  Similarity=0.708  Sum_probs=78.4

Q ss_pred             CCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCC-
Q psy12022         15 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ-   93 (143)
Q Consensus        15 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~-   93 (143)
                      +++++|.|..|++.|.....|..|++.|.+..+                    |.|+.|++.|.....|..|++.|+++ 
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~l~~H~~~h~~~~   62 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKP--------------------YSCPVCGLRFKRKDRMSYHVRSHDGSV   62 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCS--------------------EECSSSCCEESCHHHHHHHHHHHCCCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCC--------------------CcCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            578899999999999999999999998888776                    99999999999999999999999886 


Q ss_pred             -CCCeeccCCcccccChHHHHhHHh-hhc
Q psy12022         94 -EPKYQCLYCPYRAKLRFNLKTHIN-VKH  120 (143)
Q Consensus        94 -~~~~~C~~C~~~f~~~~~l~~H~~-~~~  120 (143)
                       ++ |.|.+|++.|.....|..|++ +|.
T Consensus        63 ~~~-~~C~~C~~~f~~~~~L~~H~~~~H~   90 (95)
T 2yt9_A           63 GKP-YICQSCGKGFSRPDHLNGHIKQVHS   90 (95)
T ss_dssp             CSS-BCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred             CCc-eECCCccchhCCHHHHHHHHHHhcC
Confidence             56 999999999999999999997 543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=6.5e-20  Score=109.21  Aligned_cols=89  Identities=17%  Similarity=0.370  Sum_probs=79.4

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhh
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYD   90 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h   90 (143)
                      ...|+++++|.|..|++.|.....|..|++.|.  ++                    |.|.+|++.|.....|..|++ |
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~--------------------~~C~~C~~~f~~~~~l~~H~~-H   64 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NA--------------------AVCPYCSLRFFSPELKQEHES-K   64 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HS--------------------BCCTTTCCCBSSHHHHHHHHH-H
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CC--------------------ccCCCCCCccCCHHHHHHHHH-c
Confidence            346889999999999999999999999998873  34                    899999999999999999996 8


Q ss_pred             cCCCCCeeccCCcccccChHHHHhHHh-hhccHH
Q psy12022         91 CGQEPKYQCLYCPYRAKLRFNLKTHIN-VKHSYE  123 (143)
Q Consensus        91 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~  123 (143)
                      +++++ |.|.+|++.|.....|..|++ +|.+++
T Consensus        65 ~~~~~-~~C~~C~~~f~~~~~L~~H~~~~H~~~~   97 (107)
T 1wjp_A           65 CEYKK-LTCLECMRTFKSSFSIWRHQVEVHNQNN   97 (107)
T ss_dssp             CSTGG-GEEGGGTEECSSHHHHHHHHHHTSCCCC
T ss_pred             CCCCC-ccCccccchhCCHHHHHHHHHHHcCCCC
Confidence            88777 999999999999999999998 655543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=2.6e-20  Score=112.22  Aligned_cols=92  Identities=18%  Similarity=0.279  Sum_probs=81.0

Q ss_pred             cccCCCCCCCCCccccccCChhHHhccccc--ccCCCCcccCCCCCCCccccccCCCccccCcccccc--cChHHHHhhh
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKY--DCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEY--KQKYGLNRHK   87 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~--h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~--~~~~~l~~h~   87 (143)
                      ..|++++||.|..|++.|.....|..|++.  |.+..+                   .+.|+.|++.|  .....|..|+
T Consensus        12 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~-------------------~~~C~~C~~~f~f~~~~~l~~H~   72 (115)
T 2dmi_A           12 SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDN-------------------HETDNNNPKRWSKPRKRSLLEME   72 (115)
T ss_dssp             CCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSC-------------------CCCCCCCCSCCSSCCCCCCCCCC
T ss_pred             eeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCC-------------------CccCCCCCcccccccHHHHHHHh
Confidence            468899999999999999999999999987  544443                   25699999998  8889999999


Q ss_pred             hhhcCCCCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         88 KYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        88 ~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      ++|+++++ |.|.+|++.|.....|..|+++|+..+
T Consensus        73 ~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           73 GKEDAQKV-LKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CSCCCCSS-CBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             hccCCCcc-eECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            99999888 999999999999999999999987653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.78  E-value=1.9e-19  Score=96.15  Aligned_cols=57  Identities=28%  Similarity=0.623  Sum_probs=54.3

Q ss_pred             CCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         65 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        65 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      ++||.|.+||+.|.....|..|+++|+|++| |.|.+|++.|...+.|..|+++|.++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRP-RSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCC-EECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcC-eECCCCCCCcCCHHHHHHHhCccCCC
Confidence            5789999999999999999999999999888 99999999999999999999998765

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.6e-19  Score=112.95  Aligned_cols=106  Identities=20%  Similarity=0.475  Sum_probs=61.9

Q ss_pred             cCCCCCCCCCcc-----ccccCChhHHhcccccccCCCCcccC------CCCCCCcc-----ccccCCCccccCc--ccc
Q psy12022         14 QNHAEMFACDVC-----GKEYKQKYGLNRHKKYDCGQEPKYHG------EDFSSWPG-----EKQNHAEMFACDV--CGK   75 (143)
Q Consensus        14 ~~~~~~~~C~~C-----~~~f~~~~~l~~h~~~h~~~~~~~~c------~~f~~~~~-----~~~~~~~~~~C~~--C~~   75 (143)
                      |.++++|.|..|     ++.|.+...|..|++.|.+..+ +.|      +.|.....     ..|+++++|.|+.  |++
T Consensus        29 h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  107 (155)
T 2gli_A           29 HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKP-HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK  107 (155)
T ss_dssp             SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCC-CCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCC
T ss_pred             CCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCC-ccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCC
Confidence            455566665532     3666666666666666666555 544      23333322     1455566666665  666


Q ss_pred             cccChHHHHhhh-hhhcCCCCCeeccC--CcccccChHHHHhHHhhhcc
Q psy12022         76 EYKQKYGLNRHK-KYDCGQEPKYQCLY--CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        76 ~~~~~~~l~~h~-~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  121 (143)
                      .|.+...|..|+ +.|.++++ |.|.+  |++.|.....|..|+++||+
T Consensus       108 ~f~~~~~L~~H~~~~H~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          108 AFSNASDRAKHQNRTHSNEKP-YVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             EESSSSTTHHHHHHTTCSCCC-EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ccCCHHHHHHHHHHhcCCCCC-eeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            666666666666 55655555 66666  66666666666666666553

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.77  E-value=4.5e-19  Score=115.51  Aligned_cols=107  Identities=26%  Similarity=0.493  Sum_probs=85.9

Q ss_pred             ccCCCCCCCC--CccccccCChhHHhcccccccCCCCcccCC------CCCCCccc------cc-cCCCcccc--Ccccc
Q psy12022         13 KQNHAEMFAC--DVCGKEYKQKYGLNRHKKYDCGQEPKYHGE------DFSSWPGE------KQ-NHAEMFAC--DVCGK   75 (143)
Q Consensus        13 ~~~~~~~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~------~f~~~~~~------~~-~~~~~~~C--~~C~~   75 (143)
                      .|.++++|.|  ..|++.|.+...|..|++.|.+..+ +.|.      .|.....+      .| .+.++|.|  +.|++
T Consensus        36 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k  114 (190)
T 1tf6_A           36 KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN-FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGK  114 (190)
T ss_dssp             HHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCC-EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCE
T ss_pred             hcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCc-eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCcc
Confidence            4677888999  7799999999999999988888877 7663      34433332      23 35678899  88999


Q ss_pred             cccChHHHHhhhhhhcCCCCCeeccC--CcccccChHHHHhHHhhhcc
Q psy12022         76 EYKQKYGLNRHKKYDCGQEPKYQCLY--CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        76 ~~~~~~~l~~h~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  121 (143)
                      .|.+...|..|+++|+++++ |.|.+  |++.|.....|..|+++|++
T Consensus       115 ~f~~~~~L~~H~~~H~~~~~-~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          115 AFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             ECSSHHHHHHHHGGGSSSCS-SBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             ccCCHHHHHHHHHHhCCCCC-ccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            99999999999999988777 99987  99999999999999998876

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.77  E-value=3.3e-19  Score=112.58  Aligned_cols=110  Identities=20%  Similarity=0.378  Sum_probs=92.4

Q ss_pred             cCCCCCCCCCccccccCChhHHhccccc-ccCCCCc-------ccC----CCCCCCcc-----ccccCCCccccCc--cc
Q psy12022         14 QNHAEMFACDVCGKEYKQKYGLNRHKKY-DCGQEPK-------YHG----EDFSSWPG-----EKQNHAEMFACDV--CG   74 (143)
Q Consensus        14 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~-------~~c----~~f~~~~~-----~~~~~~~~~~C~~--C~   74 (143)
                      +..+.+|.|..|++.|.+...|..|++. |.+..+.       +.|    ..|.....     ..|+++++|.|..  |+
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTC
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCC
Confidence            4556789999999999999999999987 7665431       345    55555444     2678899999998  99


Q ss_pred             ccccChHHHHhhhhhhcCCCCCeeccC--CcccccChHHHHhHHhhhccHHH
Q psy12022         75 KEYKQKYGLNRHKKYDCGQEPKYQCLY--CPYRAKLRFNLKTHINVKHSYEY  124 (143)
Q Consensus        75 ~~~~~~~~l~~h~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~  124 (143)
                      +.|.....|..|++.|+++++ |.|.+  |++.|.....|..|+++|++++.
T Consensus       100 ~~f~~~~~L~~H~~~h~~~~~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~  150 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHMHVHTSDKS  150 (155)
T ss_dssp             CEESCHHHHHHHHTTTCSSCS-BCCSSTTCCCCBSSHHHHHHSSTTTTSCCC
T ss_pred             CccCCHHHHHHHHHhhCCCCC-ccCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            999999999999999999887 99997  99999999999999999987654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.77  E-value=1.4e-18  Score=102.00  Aligned_cols=89  Identities=24%  Similarity=0.519  Sum_probs=80.5

Q ss_pred             cccCCCCCCCCCc--cccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccC--cccccccChHHHHhhh
Q psy12022         12 EKQNHAEMFACDV--CGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACD--VCGKEYKQKYGLNRHK   87 (143)
Q Consensus        12 ~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~   87 (143)
                      .....+++|.|..  |++.|.....|..|++.|.+..+                    |.|+  .|++.|.....|..|+
T Consensus         8 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~~~C~~~f~~~~~l~~H~   67 (100)
T 2ebt_A            8 PDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP--------------------YKCTWEGCDWRFARSDELTRHY   67 (100)
T ss_dssp             CCCCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCC--------------------EECCSSSCCCEESSHHHHHHHH
T ss_pred             cccccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCC--------------------eeCCCCCCCCccCCHHHHHHHH
Confidence            3445667899997  99999999999999999888777                    8996  6999999999999999


Q ss_pred             hhhcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         88 KYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        88 ~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      +.|+++++ |.|.+|++.|.....|..|+++|++
T Consensus        68 ~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           68 RKHTGAKP-FQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHTSCCS-CBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHhCCCCC-eECCCCcCccCCHHHHHHHHHHhCC
Confidence            99999888 9999999999999999999999863

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.76  E-value=1.2e-18  Score=100.15  Aligned_cols=82  Identities=29%  Similarity=0.652  Sum_probs=76.7

Q ss_pred             CCCCCCCc--cccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccC--cccccccChHHHHhhhhhhcC
Q psy12022         17 AEMFACDV--CGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACD--VCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        17 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      .++|.|..  |++.|.....|..|++.|.+..+                    |.|+  .|++.|.....|..|++.|++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~~~C~~~f~~~~~l~~H~~~h~~   62 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP--------------------YHCDWDGCGWKFARSDELTRHYRKHTG   62 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCC--------------------EECCSTTTCCEESSHHHHHHHHHHHHC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC--------------------cCCCCCCCCCccCCHHHHHHHHHHcCC
Confidence            46899999  99999999999999998888777                    8997  699999999999999999999


Q ss_pred             CCCCeeccCCcccccChHHHHhHHhhh
Q psy12022         93 QEPKYQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        93 ~~~~~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      +++ |.|.+|++.|.....|..|+++|
T Consensus        63 ~~~-~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           63 HRP-FQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CCC-EECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCC-ccCCCCCcccCCHHHHHHHHHhh
Confidence            888 99999999999999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=6.6e-20  Score=115.74  Aligned_cols=119  Identities=17%  Similarity=0.253  Sum_probs=98.2

Q ss_pred             CCCCCCCccccccCChhHHhcccc---cccCCCCcccC---------CCCCCCcc-----ccccCCCccccCc--ccccc
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKK---YDCGQEPKYHG---------EDFSSWPG-----EKQNHAEMFACDV--CGKEY   77 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~---~h~~~~~~~~c---------~~f~~~~~-----~~~~~~~~~~C~~--C~~~~   77 (143)
                      |.+|.|..|++.|.+...|..|++   .|.+..+ +.|         +.|.....     ..|.++++|.|+.  |++.|
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~-~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   79 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKE-FVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSY   79 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSC-CCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcc-eeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcc
Confidence            458999999999999999999998   6777777 776         23444433     2678899999985  99999


Q ss_pred             cChHHHHhhhhhhcCCCCCeeccC--CcccccChHHHHhHH-hhhccHHHHHHHH--hhccCccc
Q psy12022         78 KQKYGLNRHKKYDCGQEPKYQCLY--CPYRAKLRFNLKTHI-NVKHSYEYIRIIL--RTAIMPSV  137 (143)
Q Consensus        78 ~~~~~l~~h~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~~~--~~~~~~~~  137 (143)
                      .+...|..|++.|+++++ |.|.+  |++.|.....|..|+ ++|.+++.+.+..  +...+...
T Consensus        80 ~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~  143 (155)
T 2gli_A           80 SRLENLKTHLRSHTGEKP-YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDP  143 (155)
T ss_dssp             SSHHHHHHHHHHTTTCCC-EECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSH
T ss_pred             cCHHHHHHHHHHcCCCCC-eeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCH
Confidence            999999999999999887 99998  999999999999998 7887776666655  55555443

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.74  E-value=3.1e-19  Score=116.31  Aligned_cols=125  Identities=19%  Similarity=0.307  Sum_probs=100.3

Q ss_pred             cccCCCCCCCC--CccccccCChhHHhcccccccCCCCcccC------CCCCCCcc-----ccccCCCccccC--ccccc
Q psy12022         12 EKQNHAEMFAC--DVCGKEYKQKYGLNRHKKYDCGQEPKYHG------EDFSSWPG-----EKQNHAEMFACD--VCGKE   76 (143)
Q Consensus        12 ~~~~~~~~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~~c------~~f~~~~~-----~~~~~~~~~~C~--~C~~~   76 (143)
                      ....++++|.|  ..|++.|.+...|..|++.|.+..+ +.|      +.|.....     ..|.++++|.|+  .|++.
T Consensus         5 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~   83 (190)
T 1tf6_A            5 ALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKP-FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLR   83 (190)
T ss_dssp             -----CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCS-SCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCE
T ss_pred             cccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCC-ccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCc
Confidence            34566889999  6899999999999999999999888 777      44544444     267888999999  89999


Q ss_pred             ccChHHHHhhh-hhhc-CCCCCeec--cCCcccccChHHHHhHHhhhccHHHHHHHH--hhccCcccc
Q psy12022         77 YKQKYGLNRHK-KYDC-GQEPKYQC--LYCPYRAKLRFNLKTHINVKHSYEYIRIIL--RTAIMPSVS  138 (143)
Q Consensus        77 ~~~~~~l~~h~-~~h~-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~--~~~~~~~~~  138 (143)
                      |.+...|..|+ +.|. ++.+ |.|  ..|++.|.....|..|+++|++++.+.+..  +...+...+
T Consensus        84 f~~~~~l~~H~~~~h~~~~~~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~  150 (190)
T 1tf6_A           84 FTTKANMKKHFNRFHNIKICV-YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPS  150 (190)
T ss_dssp             ESCHHHHHHHHHTTSSTTTSC-CEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHH
T ss_pred             cCCHHHHHHHHHHhcCCCcce-eeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHH
Confidence            99999999999 5663 4455 999  899999999999999999999888777755  666665543

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.73  E-value=1.2e-19  Score=104.50  Aligned_cols=83  Identities=20%  Similarity=0.469  Sum_probs=76.9

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCCCCC
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPK   96 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   96 (143)
                      ++||.|..|++.|.....|..|++.|.+..+                    |.|+.|++.|.....|..|++.|++ .+ 
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~--------------------~~C~~C~k~f~~~~~L~~H~~~h~~-~~-   58 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP--------------------FACDICGRKFARSDERKRHRDIQHI-LP-   58 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC--------------------EECTTTCCEESSHHHHHHHHHHHTH-HH-
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCC--------------------ccCCCCCCccCCHHHHHHHHHHhCC-Cc-
Confidence            5799999999999999999999998888777                    9999999999999999999999985 56 


Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|..|++.|.....|..|++..|+
T Consensus        59 ~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           59 ILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhhhHHHHHHHHH
Confidence            9999999999999999999998765

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.72  E-value=1.7e-18  Score=92.49  Aligned_cols=57  Identities=35%  Similarity=0.776  Sum_probs=54.3

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCC
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      |+||.|..||+.|.....|..|+++|.++++                    |.|.+||+.|.....|..|+++|+|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp--------------------~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRP--------------------RSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCC--------------------EECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcC--------------------eECCCCCCCcCCHHHHHHHhCccCCC
Confidence            7999999999999999999999999988887                    99999999999999999999999874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.69  E-value=2.2e-17  Score=93.95  Aligned_cols=78  Identities=31%  Similarity=0.647  Sum_probs=73.3

Q ss_pred             CCCC--CccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCc--ccccccChHHHHhhhhhhcCCC
Q psy12022         19 MFAC--DVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDV--CGKEYKQKYGLNRHKKYDCGQE   94 (143)
Q Consensus        19 ~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~   94 (143)
                      ||.|  ..|++.|.....|..|++.|.+.++                    |.|+.  |++.|.....|..|+++|++  
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~~~C~~~f~~~~~l~~H~~~h~~--   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP--------------------YECPHEGCDKRFSLPSRLKRHEKVHAG--   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC--------------------EECCSTTCCCEESSHHHHHHHHHHHHS--
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC--------------------eeCCCCCCcCccCCHHHHHHHHHHhCC--
Confidence            6889  8999999999999999999888777                    99988  99999999999999999987  


Q ss_pred             CCeeccC---CcccccChHHHHhHHhhhc
Q psy12022         95 PKYQCLY---CPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        95 ~~~~C~~---C~~~f~~~~~l~~H~~~~~  120 (143)
                        |.|.+   |++.|.....|..|+++||
T Consensus        59 --~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           59 --YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             --EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             --CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence              99999   9999999999999999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=4e-17  Score=91.77  Aligned_cols=72  Identities=29%  Similarity=0.591  Sum_probs=65.9

Q ss_pred             CCCCCCCCCc--cccccCChhHHhcccc-cccCCCCcccCCCCCCCccccccCCCccccCc--ccccccChHHHHhhhhh
Q psy12022         15 NHAEMFACDV--CGKEYKQKYGLNRHKK-YDCGQEPKYHGEDFSSWPGEKQNHAEMFACDV--CGKEYKQKYGLNRHKKY   89 (143)
Q Consensus        15 ~~~~~~~C~~--C~~~f~~~~~l~~h~~-~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~   89 (143)
                      +++++|.|..  |++.|.+...|..|++ .|.+.++                    |.|+.  |++.|.....|..|+++
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~--------------------~~C~~~~C~k~f~~~~~L~~H~~~   62 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS--------------------FSCPEPACGKSFNFKKHLKEHMKL   62 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC--------------------EECSCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC--------------------eECCCCCCcCccCCHHHHHHHHHH
Confidence            5678999987  9999999999999998 6887776                    99998  99999999999999999


Q ss_pred             hcCCCCCeeccCCccccc
Q psy12022         90 DCGQEPKYQCLYCPYRAK  107 (143)
Q Consensus        90 h~~~~~~~~C~~C~~~f~  107 (143)
                      |+++++ |.|.+|++.|.
T Consensus        63 H~~~~~-~~C~~C~k~F~   79 (79)
T 2dlk_A           63 HSDTRD-YICEFSGPSSG   79 (79)
T ss_dssp             HHTSCC-CSCCSSSCCCC
T ss_pred             hCCCCC-eeCCCCCCCCC
Confidence            999888 99999999884

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.66  E-value=4.7e-17  Score=100.45  Aligned_cols=77  Identities=19%  Similarity=0.368  Sum_probs=69.5

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcC
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      .|++++||.|+.|++.|.....|..|++.|.++++                    |.|++|++.|.....|..|++.|++
T Consensus        44 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~--------------------~~C~~C~k~F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           44 IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR--------------------YQCLACGKSFINYQFMSSHIKSVHS  103 (133)
T ss_dssp             HHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCC--------------------EEESSSCCEESSHHHHHHHHHHHTC
T ss_pred             HcCCCCCeeCCccCeecccccchhhhccccCCCcc--------------------ccCCCCCCCcCCHHHHHHHhHHhcC
Confidence            57899999999999999999999999998888877                    9999999999999999999999987


Q ss_pred             CCC-----CeeccCCcccccCh
Q psy12022         93 QEP-----KYQCLYCPYRAKLR  109 (143)
Q Consensus        93 ~~~-----~~~C~~C~~~f~~~  109 (143)
                      ++|     +|+|.+|++.|...
T Consensus       104 ~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A          104 QDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             CCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCCCCCCCCeecCCCCchhhhc
Confidence            643     48999999888654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=3e-16  Score=87.87  Aligned_cols=66  Identities=30%  Similarity=0.737  Sum_probs=47.7

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcC
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      .+.++++|.|..|++.|.....|..|++.|.+.++                    |.|++|++.|.....|..|+++|++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~L~~H~~~H~~   71 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP--------------------YKCDECGKAFIQRSHLIGHHRVHTG   71 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS--------------------EECSSSCCEESSHHHHHHHGGGSCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcC--------------------eeCCCCCCccCCHHHHHHHHHHhCC
Confidence            45566777777777777777777777776666655                    7777777777777777777777777


Q ss_pred             CCCCeec
Q psy12022         93 QEPKYQC   99 (143)
Q Consensus        93 ~~~~~~C   99 (143)
                      +++ |+|
T Consensus        72 ~~p-~~C   77 (77)
T 2cot_A           72 SGP-SSG   77 (77)
T ss_dssp             CCC-CCC
T ss_pred             CCC-CCC
Confidence            666 665

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=5.1e-16  Score=85.84  Aligned_cols=62  Identities=24%  Similarity=0.494  Sum_probs=57.6

Q ss_pred             ccccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         60 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        60 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      ..|+++++|.|++|++.|.....|..|++.|+++++ |.|.+|++.|.....|..|+++|+++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP-YKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC-EECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC-eECCCCCcccCCHHHHHHHHHhcCCC
Confidence            367788889999999999999999999999999888 99999999999999999999998764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.63  E-value=5.3e-16  Score=81.80  Aligned_cols=57  Identities=32%  Similarity=0.734  Sum_probs=50.5

Q ss_pred             CCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         64 HAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        64 ~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      ++++|.|+.|++.|.....|..|+++|+++++ |.|.+|++.|.....|..|+++||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKP-YKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCC-EECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCC-cCCCCCcchhCCHHHHHHHHHHhcC
Confidence            35689999999999999999999999999888 9999999999999999999999874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=5.3e-16  Score=85.28  Aligned_cols=62  Identities=24%  Similarity=0.529  Sum_probs=57.3

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      .++++++|.|..|++.|.....|..|+++|+++++ |.|.+|++.|.....|..|+++|++++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCS-EECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-EeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            35677889999999999999999999999998887 999999999999999999999998764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=1e-15  Score=87.17  Aligned_cols=78  Identities=22%  Similarity=0.392  Sum_probs=60.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhc
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~   91 (143)
                      ..|++++||.|..|++.|.....|..|+..+.....                .+++|.|.+|++.|.....|..|++.|+
T Consensus         8 ~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~----------------~~~~~~C~~C~~~f~~~~~L~~H~~~h~   71 (86)
T 1x6h_A            8 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF----------------VPAAFVCSKCGKTFTRRNTMARHADNCA   71 (86)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC----------------CCCCEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             ceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcC----------------CCcceECCCCCChhCCHHHHHHHHHHcc
Confidence            467888888888888888888888888876554420                1124888888888888888888888888


Q ss_pred             CCCCCeeccCCcccc
Q psy12022         92 GQEPKYQCLYCPYRA  106 (143)
Q Consensus        92 ~~~~~~~C~~C~~~f  106 (143)
                      ++++ +.|..|+..|
T Consensus        72 ~~~~-~~~~~~~~~~   85 (86)
T 1x6h_A           72 GPDG-VEGENSGPSS   85 (86)
T ss_dssp             CCCS-CCCCCCCCCC
T ss_pred             CCCC-cccCCCCCCC
Confidence            8777 8888888654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=6.1e-16  Score=85.95  Aligned_cols=62  Identities=27%  Similarity=0.553  Sum_probs=57.4

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      ...++++|.|..|++.|.....|..|++.|+++++ |.|.+|++.|.....|..|+++|++++
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS-EECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCC-EECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            45677889999999999999999999999999887 999999999999999999999998764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=3.9e-16  Score=91.90  Aligned_cols=70  Identities=17%  Similarity=0.269  Sum_probs=60.1

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccc-ccc---CCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhh-h
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKK-YDC---GQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRH-K   87 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~---~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h-~   87 (143)
                      ...+++||.|..|++.|.....|..|++ .|.   +.++                    |.|.+||+.|.....|..| +
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekp--------------------f~C~~Cgk~F~~~~~L~~H~~   71 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSS--------------------YVCVECNFLTKRYDALSEHNL   71 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCC--------------------EEETTTTEEESSTHHHHTHHH
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCC--------------------cCCCCCCcccCCHHHHHHHHH
Confidence            3467889999999999999999999987 473   3444                    9999999999999999999 7


Q ss_pred             hhhcCCCCCeeccCCc
Q psy12022         88 KYDCGQEPKYQCLYCP  103 (143)
Q Consensus        88 ~~h~~~~~~~~C~~C~  103 (143)
                      ++|++++| |.|.++.
T Consensus        72 r~Htgekp-y~C~~~~   86 (102)
T 2ghf_A           72 KYHPGEEN-FKLTMVK   86 (102)
T ss_dssp             HTSTTCCC-EEEEECC
T ss_pred             HhcCCCCC-eeCCccc
Confidence            89999888 9998755

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=1.3e-15  Score=84.64  Aligned_cols=66  Identities=24%  Similarity=0.694  Sum_probs=59.1

Q ss_pred             CCcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhh
Q psy12022         10 PGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKY   89 (143)
Q Consensus        10 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~   89 (143)
                      ....+.++++|+|..|++.|.....|..|++.|.+.++                    |.|..|++.|.....|..|+++
T Consensus         8 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~--------------------~~C~~C~k~f~~~~~L~~H~~~   67 (74)
T 2lce_A            8 HSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP--------------------YRCNICGAQFNRPANLKTHTRI   67 (74)
T ss_dssp             ---CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS--------------------EECTTTCCEESCHHHHHHHHHH
T ss_pred             cccccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCC--------------------EECCCCCchhCCHHHHHHHHHh
Confidence            34467889999999999999999999999999888777                    9999999999999999999999


Q ss_pred             hcCCCC
Q psy12022         90 DCGQEP   95 (143)
Q Consensus        90 h~~~~~   95 (143)
                      |++++|
T Consensus        68 H~~~kp   73 (74)
T 2lce_A           68 HSGEKP   73 (74)
T ss_dssp             HCCSCC
T ss_pred             cCCCCC
Confidence            999776

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=1.3e-15  Score=86.72  Aligned_cols=60  Identities=30%  Similarity=0.520  Sum_probs=53.7

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      .+...+++.|++|++.|.....|..|+++|++++| |.|.+|++.|.....|..|++..|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQV-FPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSS-EECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCc-cCCCCCCCEeCCHHHHHHhCcccCc
Confidence            44566779999999999999999999999999888 9999999999999999999865443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=1.7e-16  Score=92.96  Aligned_cols=62  Identities=21%  Similarity=0.318  Sum_probs=55.8

Q ss_pred             ccCCCccccCccccccc-ChHHHHhhhhhhcC-CCCCeeccCCcccccChHHHHhHHhhhccHHH
Q psy12022         62 QNHAEMFACDVCGKEYK-QKYGLNRHKKYDCG-QEPKYQCLYCPYRAKLRFNLKTHINVKHSYEY  124 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~-~~~~l~~h~~~h~~-~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  124 (143)
                      |+++++|.|.+|++.|. ....|..|+++|++ +++ |.|.+|++.|.....|..|+++|++++.
T Consensus        19 h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~-~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           19 IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA-LKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH-HSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC-EECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            44445599999999999 99999999999998 777 9999999999999999999999998764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.1e-15  Score=82.89  Aligned_cols=63  Identities=25%  Similarity=0.488  Sum_probs=59.2

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcC
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      +|+++++|.|..|++.|.....|..|++.|.+.++                    |.|.+|++.|.....|..|++.|++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~--------------------~~C~~C~~~f~~~~~L~~H~~~h~~   62 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRP--------------------FKCNYCSFDTKQPSNLSKHMKKFHG   62 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCS--------------------EECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC--------------------EeCCCCCCccCCHHHHHHHHHHHhC
Confidence            57889999999999999999999999999888877                    9999999999999999999999999


Q ss_pred             CCC
Q psy12022         93 QEP   95 (143)
Q Consensus        93 ~~~   95 (143)
                      +++
T Consensus        63 ~~p   65 (70)
T 1x5w_A           63 DMS   65 (70)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            776

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2e-15  Score=81.95  Aligned_cols=60  Identities=20%  Similarity=0.482  Sum_probs=54.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhh-h-cCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKY-D-CGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~-h-~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      +|+++++|.|+.|++.|.....|..|++. | .++++ |.|..|++.|.....|..|++++|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~-~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-YPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC-EECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcC-eECCCCCCccCCHHHHHHHHHHHcC
Confidence            56778889999999999999999999998 6 46666 9999999999999999999999886

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=7.5e-16  Score=86.21  Aligned_cols=63  Identities=27%  Similarity=0.550  Sum_probs=57.7

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHH
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEY  124 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  124 (143)
                      .+.++++|.|++|++.|.....|..|++.|+++++ |.|.+|++.|.....|..|+++|+++++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~~~H~~~~p   74 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP-YKCDECGKAFIQRSHLIGHHRVHTGSGP   74 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS-EECSSSCCEESSHHHHHHHGGGSCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcC-eeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            45677889999999999999999999999998777 9999999999999999999999987653

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.57  E-value=2.9e-15  Score=78.91  Aligned_cols=56  Identities=29%  Similarity=0.634  Sum_probs=52.4

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      ||.|+.|++.|.....|..|+++|+++++ |.|.+|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP-YHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC-EECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC-ccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58999999999999999999999999877 999999999999999999999988753

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=3.6e-15  Score=83.42  Aligned_cols=63  Identities=19%  Similarity=0.421  Sum_probs=53.0

Q ss_pred             cccCCCccccCcccccccChHHHHhhhh-hhcCCCCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKK-YDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      +|+++++|.|++|++.|.....|..|++ .|.++..+|.|.+|++.|.....|..|++++|+..
T Consensus         9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            9 THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            3444455999999999999999999997 56654234999999999999999999999988754

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=3.5e-15  Score=83.62  Aligned_cols=61  Identities=21%  Similarity=0.427  Sum_probs=55.5

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcC---CCCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCG---QEPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~---~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      |+++++|.|.+|++.|.....|..|+++|++   +++ |.|.+|++.|.....|..|++.+|.+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~-~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCC-EECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcc-cCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            6788899999999999999999999999986   566 999999999999999999997777654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.54  E-value=8.3e-15  Score=83.43  Aligned_cols=67  Identities=25%  Similarity=0.428  Sum_probs=58.1

Q ss_pred             CCCCcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhh
Q psy12022          8 SWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHK   87 (143)
Q Consensus         8 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~   87 (143)
                      .-+...+..+++|.|+.|++.|.....|..|++.|.++++                    |.|.+|++.|.....|..|+
T Consensus        17 ~~~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~--------------------~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           17 AGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQV--------------------FPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             CSCCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSS--------------------EECTTSSCEESSHHHHHHHH
T ss_pred             CCCCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCc--------------------cCCCCCCCEeCCHHHHHHhC
Confidence            3344556778899999999999999999999999988877                    99999999999999999997


Q ss_pred             -hhhcCCC
Q psy12022         88 -KYDCGQE   94 (143)
Q Consensus        88 -~~h~~~~   94 (143)
                       +.|.+++
T Consensus        77 ~~~H~~E~   84 (85)
T 2lv2_A           77 NKCHPSEN   84 (85)
T ss_dssp             HTTCTTCC
T ss_pred             cccCcCCC
Confidence             5676654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=7.4e-15  Score=81.08  Aligned_cols=64  Identities=25%  Similarity=0.600  Sum_probs=59.0

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhh
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYD   90 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h   90 (143)
                      ...|.++++|.|..|++.|.....|..|++.|.+.++                    |.|++|++.|.....|..|+++|
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP--------------------YKCLECGKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC--------------------EECSSSCCEESSHHHHHHHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC--------------------eECCCCCcccCCHHHHHHHHHhc
Confidence            4578999999999999999999999999999888777                    99999999999999999999999


Q ss_pred             cCCC
Q psy12022         91 CGQE   94 (143)
Q Consensus        91 ~~~~   94 (143)
                      +++.
T Consensus        66 ~~~~   69 (72)
T 1x6e_A           66 TSGP   69 (72)
T ss_dssp             HSSS
T ss_pred             CCCC
Confidence            8743

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.2e-15  Score=86.91  Aligned_cols=65  Identities=20%  Similarity=0.328  Sum_probs=55.1

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCC---CCeeccCCcccccChHHHHhHHhhhccHHHHH
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQE---PKYQCLYCPYRAKLRFNLKTHINVKHSYEYIR  126 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~---~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  126 (143)
                      |+++++|.|.+|++.|.....|..|++.++++.   .+|.|.+|++.|.....|..|+++|++++.+.
T Consensus        10 H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   77 (86)
T 1x6h_A           10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE   77 (86)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCC
T ss_pred             ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcc
Confidence            334444999999999999999999999887752   34999999999999999999999999876543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=8.3e-16  Score=90.51  Aligned_cols=67  Identities=15%  Similarity=0.285  Sum_probs=58.0

Q ss_pred             ccCCCccccCcccccccChHHHHhhhh-hh---cCCCCCeeccCCcccccChHHHHhH-HhhhccHHHHHHHH
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKK-YD---CGQEPKYQCLYCPYRAKLRFNLKTH-INVKHSYEYIRIIL  129 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~-~h---~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~~~~~~~  129 (143)
                      .++++||.|.+|++.|.....|..|++ .|   .++++ |.|.+|++.|.....|..| +++|.+++++.+..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekp-f~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSS-YVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCC-EEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCC-cCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            467888999999999999999999997 48   45566 9999999999999999999 89988877655544

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=6.9e-15  Score=85.79  Aligned_cols=55  Identities=24%  Similarity=0.373  Sum_probs=49.9

Q ss_pred             CCccccCcccccc-cChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhH-Hhhhcc
Q psy12022         65 AEMFACDVCGKEY-KQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTH-INVKHS  121 (143)
Q Consensus        65 ~~~~~C~~C~~~~-~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~  121 (143)
                      +++|.|++|++.| .....|..|+++| ++++ |.|.+|++.|.....|..| +++|.+
T Consensus        32 ~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~-~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           32 KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM-FTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             TSCEECTTTCSCEESSHHHHHHHHHHH-CCCC-CCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC-eECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            3449999999999 9999999999999 8777 9999999999999999999 777754

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.52  E-value=1e-14  Score=83.55  Aligned_cols=70  Identities=19%  Similarity=0.382  Sum_probs=60.3

Q ss_pred             CCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHHHHHHhhccCcc
Q psy12022         65 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPS  136 (143)
Q Consensus        65 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~  136 (143)
                      ++||.|+.|++.|.....|..|+++|+++++ |.|.+|++.|.....|..|+++|++ ..+.+..+...+..
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~   70 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSK   70 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCC-ccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHH
Confidence            3679999999999999999999999999888 9999999999999999999999985 55555555554443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.5e-14  Score=76.06  Aligned_cols=55  Identities=25%  Similarity=0.562  Sum_probs=49.9

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHh-hhcc
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHIN-VKHS  121 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~  121 (143)
                      ++|.|+.|++.|.....|..|++.|+++++ |.|.+|++.|.....|..|++ +|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP-YPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS-EECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC-ccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            469999999999999999999999998777 999999999999999999974 5543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.48  E-value=1.5e-14  Score=76.08  Aligned_cols=57  Identities=28%  Similarity=0.565  Sum_probs=49.6

Q ss_pred             CCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcC
Q psy12022         16 HAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        16 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      +++||.|..|++.|.....|..|++.|.+.++                    |.|++|++.|.....|..|++.|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKP--------------------YKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCC--------------------EECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCC--------------------cCCCCCcchhCCHHHHHHHHHHhcC
Confidence            46899999999999999999999999888877                    9999999999999999999998864

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=6.4e-14  Score=77.36  Aligned_cols=59  Identities=27%  Similarity=0.540  Sum_probs=53.9

Q ss_pred             cccCCCccccC--cccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhc
Q psy12022         61 KQNHAEMFACD--VCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        61 ~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      .+.++++|.|+  .|++.|.....|..|++.|.++++ |.|.+|++.|.....|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKP-FQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC-eECCCCCchhCCHHHHHHHHHhcC
Confidence            45677789997  599999999999999999999888 999999999999999999999873

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.5e-14  Score=78.46  Aligned_cols=62  Identities=21%  Similarity=0.411  Sum_probs=55.4

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhccccc-c-cCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhh
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKY-D-CGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKK   88 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~-h-~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~   88 (143)
                      ...|++++||.|..|++.|.....|..|+.. | .+.++                    |.|+.|++.|.....|..|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~--------------------~~C~~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV--------------------YPCPFCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC--------------------EECTTTCCEESCHHHHHHHHH
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcC--------------------eECCCCCCccCCHHHHHHHHH
Confidence            3568899999999999999999999999987 6 45555                    999999999999999999999


Q ss_pred             hhcC
Q psy12022         89 YDCG   92 (143)
Q Consensus        89 ~h~~   92 (143)
                      .+++
T Consensus        62 ~~H~   65 (66)
T 2drp_A           62 IIHK   65 (66)
T ss_dssp             HHTC
T ss_pred             HHcC
Confidence            9875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=2.3e-14  Score=79.17  Aligned_cols=71  Identities=23%  Similarity=0.533  Sum_probs=59.4

Q ss_pred             CCCCCCCCCCCcccCCCCCCCCC--ccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCccccccc
Q psy12022          1 MLPKDFSSWPGEKQNHAEMFACD--VCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYK   78 (143)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~   78 (143)
                      |.|..........+.++++|.|.  .|++.|.....|..|++.|.+.++                    |.|++|++.|.
T Consensus         1 ~e~~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~   60 (73)
T 1f2i_G            1 MEPHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKP--------------------FQCRICMRNFS   60 (73)
T ss_dssp             -------CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC--------------------EECTTTCCEES
T ss_pred             CCCCCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC--------------------eECCCCCchhC
Confidence            56777778888899999999997  599999999999999998888877                    99999999999


Q ss_pred             ChHHHHhhhhhhc
Q psy12022         79 QKYGLNRHKKYDC   91 (143)
Q Consensus        79 ~~~~l~~h~~~h~   91 (143)
                      ....|..|+++|+
T Consensus        61 ~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           61 RSDHLTTHIRTHT   73 (73)
T ss_dssp             CHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHhcC
Confidence            9999999998874

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=1e-14  Score=85.31  Aligned_cols=66  Identities=24%  Similarity=0.456  Sum_probs=59.9

Q ss_pred             cccCCCCCCCCCccccccC-ChhHHhcccccccC-CCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhh
Q psy12022         12 EKQNHAEMFACDVCGKEYK-QKYGLNRHKKYDCG-QEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKY   89 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~-~~~~l~~h~~~h~~-~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~   89 (143)
                      ..|.++++|.|..|++.|. ....|..|++.|.+ .++                    |.|.+|++.|.....|..|++.
T Consensus        17 ~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~--------------------~~C~~C~k~F~~~~~L~~H~~~   76 (98)
T 2gqj_A           17 RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA--------------------LKCQHCRKQFKSKAGLNYHTMA   76 (98)
T ss_dssp             HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH--------------------HSCSSSCCCCSCHHHHHHHHHH
T ss_pred             HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC--------------------EECCCCCCccCCHHHHHHHHHH
Confidence            3578899999999999999 99999999998887 665                    9999999999999999999999


Q ss_pred             hcCCCCCee
Q psy12022         90 DCGQEPKYQ   98 (143)
Q Consensus        90 h~~~~~~~~   98 (143)
                      |+++++ ..
T Consensus        77 h~~~kp-~~   84 (98)
T 2gqj_A           77 EHSAKP-SD   84 (98)
T ss_dssp             HSCSCS-SC
T ss_pred             HcCCCC-CC
Confidence            999777 43

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.46  E-value=5.2e-14  Score=73.99  Aligned_cols=56  Identities=25%  Similarity=0.564  Sum_probs=52.5

Q ss_pred             CCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCCC
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQE   94 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   94 (143)
                      ||.|..|++.|.+...|..|++.|.+..+                    |.|+.|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP--------------------YHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC--------------------EECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC--------------------ccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999999888777                    999999999999999999999998865

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.46  E-value=1.3e-13  Score=81.37  Aligned_cols=66  Identities=24%  Similarity=0.567  Sum_probs=60.4

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcC
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      .|.++++|.|..|++.|.....|..|++.|.+.++                    |.|.+|++.|.....|..|+++|++
T Consensus        39 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~L~~H~~~H~~   98 (106)
T 2ee8_A           39 THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP--------------------FKCQECGKGFCQSRTLAVHKTLHMQ   98 (106)
T ss_dssp             HHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT--------------------TSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred             HcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCC--------------------eECCCcCCcccCHHHHHHHHHHhCC
Confidence            56788999999999999999999999998888777                    9999999999999999999999999


Q ss_pred             CCCCeec
Q psy12022         93 QEPKYQC   99 (143)
Q Consensus        93 ~~~~~~C   99 (143)
                      +++ |.+
T Consensus        99 ~~~-~~~  104 (106)
T 2ee8_A           99 TSS-PTA  104 (106)
T ss_dssp             CCC-CCC
T ss_pred             CCC-CcC
Confidence            877 653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.45  E-value=8e-15  Score=85.16  Aligned_cols=73  Identities=23%  Similarity=0.480  Sum_probs=63.4

Q ss_pred             cCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHHHHHHhhccCcc
Q psy12022         63 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPS  136 (143)
Q Consensus        63 ~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~  136 (143)
                      .++++|.|..|++.|.....|..|++.|+++++ |.|.+|++.|.....|..|+++|++++.+.+..+...+..
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   76 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRN   76 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCS-EECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESS
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCC-EeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCC
Confidence            456789999999999999999999999998777 9999999999999999999999988776666655555544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.45  E-value=5.2e-14  Score=88.59  Aligned_cols=79  Identities=19%  Similarity=0.413  Sum_probs=68.6

Q ss_pred             CCCCccccccCChhHHhcccccccCCCCcccCC------CCCCCcc-----ccccCCCccccCc--ccccccChHHHHhh
Q psy12022         20 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGE------DFSSWPG-----EKQNHAEMFACDV--CGKEYKQKYGLNRH   86 (143)
Q Consensus        20 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~------~f~~~~~-----~~~~~~~~~~C~~--C~~~~~~~~~l~~h   86 (143)
                      |.|..|++.|.+...|..|++.|.+.++ +.|.      .|.....     ..|+++++|.|..  |++.|.....|..|
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKP-FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCS-EECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCc-ccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHH
Confidence            8999999999999999999999999888 8773      3444433     2688899999997  99999999999999


Q ss_pred             hhhhcCCCCCeecc
Q psy12022         87 KKYDCGQEPKYQCL  100 (143)
Q Consensus        87 ~~~h~~~~~~~~C~  100 (143)
                      +++|+++++ |.|.
T Consensus       142 ~~~H~~~k~-~~c~  154 (155)
T 2rpc_A          142 MHVHTSDKS-GPSS  154 (155)
T ss_dssp             STTTTSCCC-SCSC
T ss_pred             HHHhcCCCC-CCCC
Confidence            999999888 9885

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=7.2e-15  Score=87.50  Aligned_cols=74  Identities=20%  Similarity=0.449  Sum_probs=63.7

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHHHHHHhhccCcc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPS  136 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~  136 (143)
                      .|+++++|.| .|++.|.....|..|++.|.++++ |.|.+|++.|.....|..|+++|++++.+.+..+...+..
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   77 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMW   77 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcC-ccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcC
Confidence            4678888999 999999999999999999998777 9999999999999999999999988766555555544443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.1e-14  Score=84.41  Aligned_cols=74  Identities=26%  Similarity=0.464  Sum_probs=63.5

Q ss_pred             cCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccH--HHHHHHHhhccCccc
Q psy12022         63 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY--EYIRIILRTAIMPSV  137 (143)
Q Consensus        63 ~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~--~~~~~~~~~~~~~~~  137 (143)
                      +++++|.|.+|++.|.....|..|++.|+++++ |.|.+|++.|.....|..|+++|++.  +.+.+..+...+...
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~   78 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKP-YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRP   78 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCS-EECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCC-CcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCH
Confidence            456789999999999999999999999998777 99999999999999999999999886  566666555555443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=2.3e-14  Score=80.32  Aligned_cols=70  Identities=21%  Similarity=0.408  Sum_probs=59.7

Q ss_pred             cCCCccccCc--ccccccChHHHHhhhh-hhcCCCCCeeccC--CcccccChHHHHhHHhhhccHHHHHHHHhhcc
Q psy12022         63 NHAEMFACDV--CGKEYKQKYGLNRHKK-YDCGQEPKYQCLY--CPYRAKLRFNLKTHINVKHSYEYIRIILRTAI  133 (143)
Q Consensus        63 ~~~~~~~C~~--C~~~~~~~~~l~~h~~-~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~  133 (143)
                      +++++|.|..  |++.|.....|..|++ .|.++++ |.|.+  |++.|.....|..|+++|++++.+.+..+...
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~   77 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS   77 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC-EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC-eECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCC
Confidence            4567788886  9999999999999999 7988777 99999  99999999999999999988776655544443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.8e-13  Score=76.36  Aligned_cols=65  Identities=17%  Similarity=0.348  Sum_probs=56.8

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccc-cccCC-CCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhh
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKK-YDCGQ-EPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKK   88 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~-~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~   88 (143)
                      ...|++++||.|..|++.|.....|..|+. .|.+. ++                    |.|++|++.|.....|..|++
T Consensus         7 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~--------------------~~C~~C~~~f~~~~~L~~H~~   66 (77)
T 2ct1_A            7 GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK--------------------FHCPHCDTVIARKSDLGVHLR   66 (77)
T ss_dssp             CCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSS--------------------EECSSSSCEESSHHHHHHHHH
T ss_pred             ccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCc--------------------cCCCCCCCccCCHHHHHHHHH
Confidence            457899999999999999999999999996 56654 44                    999999999999999999999


Q ss_pred             hhcCCCC
Q psy12022         89 YDCGQEP   95 (143)
Q Consensus        89 ~h~~~~~   95 (143)
                      .+++...
T Consensus        67 ~~H~~~~   73 (77)
T 2ct1_A           67 KQHSYSG   73 (77)
T ss_dssp             HTSCCSC
T ss_pred             HhCCCCC
Confidence            8776554

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.43  E-value=7.9e-14  Score=85.26  Aligned_cols=59  Identities=19%  Similarity=0.386  Sum_probs=54.9

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      .|+++++|.|++|++.|.....|..|+++|  +++ |.|.+|++.|.....|..|+++|++.
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~-~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHT-KVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCC-CBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCC-CCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            577889999999999999999999999998  577 99999999999999999999999874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=5.7e-14  Score=78.59  Aligned_cols=63  Identities=22%  Similarity=0.497  Sum_probs=54.6

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccC---CCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhh
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG---QEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKY   89 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~---~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~   89 (143)
                      .|++++||.|..|++.|.....|..|++.|.+   .++                    |.|.+|++.|.....|..|++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~--------------------~~C~~C~k~f~~~~~L~~H~~~   60 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR--------------------FPCEFCGKRFEKPDSVAAHRSK   60 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCC--------------------EECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcc--------------------cCCCCCCchhCCHHHHHHHHHH
Confidence            37899999999999999999999999998885   444                    9999999999999999999955


Q ss_pred             -hcCCCC
Q psy12022         90 -DCGQEP   95 (143)
Q Consensus        90 -h~~~~~   95 (143)
                       |.++.+
T Consensus        61 ~H~~~~~   67 (78)
T 2d9h_A           61 SHPALLL   67 (78)
T ss_dssp             TSTTTSS
T ss_pred             hCCCCCC
Confidence             544333

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.41  E-value=1.7e-14  Score=86.81  Aligned_cols=76  Identities=21%  Similarity=0.401  Sum_probs=65.7

Q ss_pred             cccCCCccccC--cccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHHHH--HHhhccCcc
Q psy12022         61 KQNHAEMFACD--VCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRI--ILRTAIMPS  136 (143)
Q Consensus        61 ~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~--~~~~~~~~~  136 (143)
                      .|.++++|.|+  .|++.|.+...|..|++.|+++++ |.|.+|++.|.....|..|+++|++++.+.+  ..+...+..
T Consensus        30 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  108 (119)
T 2jp9_A           30 KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP-FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR  108 (119)
T ss_dssp             HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESS
T ss_pred             hhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC-ccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCC
Confidence            57888999999  799999999999999999999888 9999999999999999999999988776666  445555544


Q ss_pred             c
Q psy12022        137 V  137 (143)
Q Consensus       137 ~  137 (143)
                      .
T Consensus       109 ~  109 (119)
T 2jp9_A          109 S  109 (119)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.41  E-value=1.6e-14  Score=81.42  Aligned_cols=71  Identities=24%  Similarity=0.497  Sum_probs=62.2

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHHHHHHhhccCcccc
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPSVS  138 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~  138 (143)
                      ||.|+.|++.|.....|..|++.|.++++ |.|.+|++.|.....|..|+++|++++.+.+..+...+...+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   71 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRP-YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSS   71 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCC-EECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCC-eeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChH
Confidence            48899999999999999999999999787 999999999999999999999999887776666666555443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.40  E-value=2e-14  Score=82.49  Aligned_cols=74  Identities=23%  Similarity=0.401  Sum_probs=62.8

Q ss_pred             CCCccccC--cccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHHHHHHhhccCcccc
Q psy12022         64 HAEMFACD--VCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPSVS  138 (143)
Q Consensus        64 ~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~  138 (143)
                      ++++|.|+  .|++.|.....|..|++.|.++++ |.|.+|++.|.....|..|+++|++++.+.+..+...+...+
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   76 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKP-FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD   76 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHH
Confidence            35679998  699999999999999999999887 999999999999999999999998887766666666555443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.3e-13  Score=80.36  Aligned_cols=61  Identities=26%  Similarity=0.447  Sum_probs=55.0

Q ss_pred             ccCCCCCCCCCcccccc-CChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhh-hhhh
Q psy12022         13 KQNHAEMFACDVCGKEY-KQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRH-KKYD   90 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f-~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h-~~~h   90 (143)
                      .+.++++|.|..|++.| .+...|..|++.| ++++                    |.|.+|++.|.....|..| +++|
T Consensus        28 ~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~--------------------~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           28 EIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM--------------------FTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             HHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCC--------------------CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             HhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC--------------------eECCCCCCeeCCHHHHHHHhHHhc
Confidence            35678899999999999 9999999999999 7776                    9999999999999999999 8888


Q ss_pred             cCCCC
Q psy12022         91 CGQEP   95 (143)
Q Consensus        91 ~~~~~   95 (143)
                      ++ ++
T Consensus        87 ~~-~p   90 (96)
T 2ctd_A           87 NS-LP   90 (96)
T ss_dssp             CC-CS
T ss_pred             CC-CC
Confidence            65 55

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.39  E-value=4.6e-14  Score=85.46  Aligned_cols=91  Identities=19%  Similarity=0.244  Sum_probs=72.4

Q ss_pred             CCCcccC----CCCCCCccc-----cccCCCccccCcccccccChHHHHhhhhh---hcCCCCCeeccCCcccccChHHH
Q psy12022         45 QEPKYHG----EDFSSWPGE-----KQNHAEMFACDVCGKEYKQKYGLNRHKKY---DCGQEPKYQCLYCPYRAKLRFNL  112 (143)
Q Consensus        45 ~~~~~~c----~~f~~~~~~-----~~~~~~~~~C~~C~~~~~~~~~l~~h~~~---h~~~~~~~~C~~C~~~f~~~~~l  112 (143)
                      ..+ +.|    ..|.....+     .|.++++|.|+.|++.|.+...|..|+..   +.++.+ |.|.+|++.|.....|
T Consensus         5 ~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~-~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            5 SSG-VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-FTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CSS-CCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC-EECSSSCCEESSHHHH
T ss_pred             CCC-CCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC-eECCCCCCccCCHHHH
Confidence            344 666    556555442     67888999999999999999999999986   456566 9999999999999999


Q ss_pred             HhHHhhhccHHHHHHHHhhccCccc
Q psy12022        113 KTHINVKHSYEYIRIILRTAIMPSV  137 (143)
Q Consensus       113 ~~H~~~~~~~~~~~~~~~~~~~~~~  137 (143)
                      ..|+++|++++.+.+..+...+...
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~  107 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQK  107 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSH
T ss_pred             HHHHHHcCCCCCccCCCccchhCCH
Confidence            9999999988776666665555443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=3.3e-15  Score=89.66  Aligned_cols=74  Identities=15%  Similarity=0.164  Sum_probs=62.0

Q ss_pred             CCccccCcccccccChHHHHhhhhh--hcCCCCCeeccCCcccc--cChHHHHhHHhhhccHHHHHHHHhhccCcccc
Q psy12022         65 AEMFACDVCGKEYKQKYGLNRHKKY--DCGQEPKYQCLYCPYRA--KLRFNLKTHINVKHSYEYIRIILRTAIMPSVS  138 (143)
Q Consensus        65 ~~~~~C~~C~~~~~~~~~l~~h~~~--h~~~~~~~~C~~C~~~f--~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~  138 (143)
                      +++|.|.+|++.|.....|..|++.  |.+.++.+.|.+|++.|  .....|..|+++|++++.+.+..+...+...+
T Consensus        17 ~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~   94 (115)
T 2dmi_A           17 ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQ   94 (115)
T ss_dssp             CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHH
T ss_pred             CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHH
Confidence            3349999999999999999999998  76666645699999998  89999999999999888777777776666544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4e-13  Score=71.30  Aligned_cols=56  Identities=27%  Similarity=0.731  Sum_probs=51.0

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhh-hhhcCC
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHK-KYDCGQ   93 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~-~~h~~~   93 (143)
                      +||.|..|++.|.....|..|++.|.+.++                    |.|+.|++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP--------------------YPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS--------------------EECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC--------------------ccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            589999999999999999999999888877                    99999999999999999997 677653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.37  E-value=1.7e-13  Score=83.05  Aligned_cols=79  Identities=22%  Similarity=0.439  Sum_probs=65.0

Q ss_pred             CCCCCCCCccccccCChhHHhcccccccCCCCcccC------CCCCCCcc-----ccccCCCccccC--cccccccChHH
Q psy12022         16 HAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG------EDFSSWPG-----EKQNHAEMFACD--VCGKEYKQKYG   82 (143)
Q Consensus        16 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c------~~f~~~~~-----~~~~~~~~~~C~--~C~~~~~~~~~   82 (143)
                      ++++|.|..|++.|.+...|..|+..|.+..+ +.|      ..|.....     ..|+++++|.|+  .|++.|.+...
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  109 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP-FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN  109 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCC-EECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTT
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-eeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHH
Confidence            78899999999999999999999999999888 776      33444433     268889999996  59999999999


Q ss_pred             HHhhhhhhcCCCC
Q psy12022         83 LNRHKKYDCGQEP   95 (143)
Q Consensus        83 l~~h~~~h~~~~~   95 (143)
                      |..|+++|+++++
T Consensus       110 L~~H~~~H~~~k~  122 (124)
T 1ubd_C          110 LKSHILTHAKAKN  122 (124)
T ss_dssp             THHHHHHHC----
T ss_pred             HHHHHHHHccccc
Confidence            9999999998765

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=3.5e-13  Score=73.03  Aligned_cols=57  Identities=21%  Similarity=0.382  Sum_probs=51.5

Q ss_pred             cCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc-CCcccccChHHHHhHHhhhccH
Q psy12022         63 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL-YCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        63 ~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~-~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      .+.++|.|..|++.|. ...|..|+++ +++++ |.|. +|++.|...+.|..|+++|.+.
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p-~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP-VACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSE-EECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcC-ccCCcccCcccccHHHHHHHHHhhccc
Confidence            4567899999999999 9999999998 88777 9999 9999999999999999987654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2e-14  Score=79.24  Aligned_cols=63  Identities=19%  Similarity=0.337  Sum_probs=55.2

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhc
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~   91 (143)
                      ..|.+++||.|..|++.|.....|..       ..+                    |.|+.|++.|.....|..|+++|+
T Consensus        11 ~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~--------------------~~C~~C~~~f~~~~~l~~H~~~H~   63 (73)
T 2ctu_A           11 KIHLGDRSQKCSKCGIIFIRRSTLSR-------RKT--------------------PMCEKCRKDSCQEAALNKDEGNES   63 (73)
T ss_dssp             CCCCCCSEEECSSSCCEEECCCCCCC-------SSS--------------------CCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred             HHhCCCCCeeCCcccchhCCHHHhCc-------CCC--------------------CCCCCCChhhcCHHHHHHHHHhhc
Confidence            46888999999999999998887765       334                    899999999999999999999999


Q ss_pred             CCCCCeeccCC
Q psy12022         92 GQEPKYQCLYC  102 (143)
Q Consensus        92 ~~~~~~~C~~C  102 (143)
                      ++++ |.|.+|
T Consensus        64 ~~~~-~~C~~C   73 (73)
T 2ctu_A           64 GKKT-SGPSSG   73 (73)
T ss_dssp             CCCC-SSCCCC
T ss_pred             CCCC-CCCCCC
Confidence            8877 999987

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.33  E-value=2.9e-13  Score=80.14  Aligned_cols=74  Identities=16%  Similarity=0.276  Sum_probs=64.7

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHHHHHHHhhccCcccc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPSVS  138 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~  138 (143)
                      .++++++|.|++|++.|.....|..|++.|.  ++ |.|.+|++.|.....|..|+. |.+++.+.+..+...+....
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~-~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NA-AVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HS-BCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CC-ccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHH
Confidence            5677788999999999999999999999984  56 999999999999999999995 88888888887777766543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.32  E-value=2.1e-12  Score=71.02  Aligned_cols=58  Identities=24%  Similarity=0.541  Sum_probs=52.1

Q ss_pred             cccCCCccccCc--ccccccChHHHHhhhhhhcCCCCCeeccC--CcccccChHHHHhHHhhh
Q psy12022         61 KQNHAEMFACDV--CGKEYKQKYGLNRHKKYDCGQEPKYQCLY--CPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        61 ~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  119 (143)
                      .....++|.|..  |++.|.....|..|++.|+++++ |.|.+  |++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS-EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCC-ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            445667899988  99999999999999999999888 99975  999999999999999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=4.3e-12  Score=73.34  Aligned_cols=70  Identities=19%  Similarity=0.251  Sum_probs=52.8

Q ss_pred             CCCCCCccccccCChhHHhccccc-ccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCCCCC
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKY-DCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPK   96 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~   96 (143)
                      ..|.|..|++.|.....|..|++. |.+..+ ..+           ..-..|.|.+|++.|.....|..|+++|+++++ 
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~-~~~-----------~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-   90 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPE-QNN-----------HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS-   90 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTT-CSC-----------CCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC-
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCC-CCc-----------cceeccCCCCCCcccCCHHHHHHHHHhcCCCCC-
Confidence            347799999999999999999886 766543 100           000127899999999999999999999988777 


Q ss_pred             eecc
Q psy12022         97 YQCL  100 (143)
Q Consensus        97 ~~C~  100 (143)
                      |.|.
T Consensus        91 ~~C~   94 (95)
T 2ej4_A           91 GPSS   94 (95)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            8886

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=3.3e-12  Score=66.38  Aligned_cols=47  Identities=21%  Similarity=0.419  Sum_probs=42.6

Q ss_pred             cccCCCccccCcccccccChHHHHhhhh-hhcCCCCCeeccCCcccccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKK-YDCGQEPKYQCLYCPYRAKL  108 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~~C~~C~~~f~~  108 (143)
                      .+.++++|.|++|++.|.....|..|++ +|+++++ |.|.+|++.|..
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~-~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCC-ccCCCCCCCCCC
Confidence            4667788999999999999999999997 8988887 999999999975

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.26  E-value=6e-12  Score=71.07  Aligned_cols=54  Identities=35%  Similarity=0.650  Sum_probs=51.0

Q ss_pred             cccc--CcccccccChHHHHhhhhhhcCCCCCeeccC--CcccccChHHHHhHHhhhcc
Q psy12022         67 MFAC--DVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY--CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        67 ~~~C--~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  121 (143)
                      ||.|  +.|++.|.....|..|++.|+++++ |.|.+  |++.|.....|..|+++|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC-EECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC-eeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            5789  8999999999999999999999888 99998  99999999999999999887

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.26  E-value=1.3e-12  Score=79.73  Aligned_cols=58  Identities=21%  Similarity=0.433  Sum_probs=53.5

Q ss_pred             cCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCC
Q psy12022         14 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        14 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      |++++||.|..|++.|.....|..|++.|  ..+                    |.|+.|++.|.....|..|++.|++.
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~--------------------~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHT--------------------KVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCC--------------------CBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCC--------------------CCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            67789999999999999999999999988  555                    99999999999999999999999874

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=3.2e-12  Score=69.15  Aligned_cols=59  Identities=25%  Similarity=0.488  Sum_probs=52.3

Q ss_pred             cCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccC-cccccccChHHHHhhhhhhcC
Q psy12022         14 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACD-VCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        14 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~-~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      .-+++||.|..|++.|. ...|..|++. .++++                    |.|+ .|++.|.....|..|+++|..
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p--------------------~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP--------------------VACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSE--------------------EECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcC--------------------ccCCcccCcccccHHHHHHHHHhhcc
Confidence            56778999999999999 9999999987 66666                    9999 999999999999999999876


Q ss_pred             CC
Q psy12022         93 QE   94 (143)
Q Consensus        93 ~~   94 (143)
                      ..
T Consensus        63 ~~   64 (66)
T 2eod_A           63 TA   64 (66)
T ss_dssp             SC
T ss_pred             cC
Confidence            44

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.21  E-value=8.8e-13  Score=75.31  Aligned_cols=72  Identities=21%  Similarity=0.407  Sum_probs=61.6

Q ss_pred             CCccccCc--ccccccChHHHHhhhhhhcCCCCCeecc--CCcccccChHHHHhHHhhhccHHHHHHHHhhccCccc
Q psy12022         65 AEMFACDV--CGKEYKQKYGLNRHKKYDCGQEPKYQCL--YCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPSV  137 (143)
Q Consensus        65 ~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~  137 (143)
                      ..+|.|+.  |++.|.....|..|++.|.++++ |.|.  .|++.|.....|..|+++|++++.+.+..+...+...
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP-YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRS   78 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCC-EECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC-cCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCH
Confidence            35689999  99999999999999999998777 9997  6999999999999999999888766666666555543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=1e-11  Score=64.52  Aligned_cols=49  Identities=24%  Similarity=0.494  Sum_probs=44.2

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccc-cccCCCCcccCCCCCCCccccccCCCccccCcccccccC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKK-YDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQ   79 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~   79 (143)
                      ...|.+++||.|..|++.|.....|..|++ .|.++++                    |.|.+|++.|.+
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~--------------------~~C~~C~k~F~~   53 (54)
T 2eps_A            4 GSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP--------------------HKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC--------------------CCSSSSCCSSCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCC--------------------ccCCCCCCCCCC
Confidence            456889999999999999999999999996 8888877                    999999999975

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.9e-11  Score=61.18  Aligned_cols=41  Identities=24%  Similarity=0.474  Sum_probs=35.9

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|+.|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytn_A            6 SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC-CSCCCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCC-CCCCCC
Confidence            34555669999999999999999999999999887 999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.19  E-value=2.2e-11  Score=61.00  Aligned_cols=41  Identities=22%  Similarity=0.448  Sum_probs=35.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emk_A            6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC-SSCCCC
T ss_pred             ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            34455569999999999999999999999999887 999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.19  E-value=2.1e-11  Score=61.01  Aligned_cols=41  Identities=17%  Similarity=0.299  Sum_probs=35.6

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em0_A            6 SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKP-SGPSSG   46 (46)
T ss_dssp             CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC-SCSSCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCC-cCCCCC
Confidence            34555569999999999999999999999999887 999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.5e-11  Score=60.74  Aligned_cols=41  Identities=22%  Similarity=0.348  Sum_probs=35.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eov_A            6 SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH-SGPSSG   46 (46)
T ss_dssp             CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS-CCSCCC
T ss_pred             CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            34455569999999999999999999999999877 999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2e-11  Score=61.10  Aligned_cols=41  Identities=20%  Similarity=0.481  Sum_probs=35.6

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eq4_A            6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC-CCCCCC
T ss_pred             cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCC-CCCCCC
Confidence            34555569999999999999999999999999887 999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.9e-11  Score=61.24  Aligned_cols=41  Identities=22%  Similarity=0.524  Sum_probs=35.2

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eml_A            6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCC-SCSSCC
T ss_pred             CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCC-CCCCCC
Confidence            34455569999999999999999999999999887 999887

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.8e-11  Score=61.00  Aligned_cols=42  Identities=19%  Similarity=0.329  Sum_probs=38.8

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCP  103 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~  103 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG-KSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCC-CCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCC-CCCcCCC
Confidence            57788889999999999999999999999999887 9999996

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.5e-11  Score=60.77  Aligned_cols=40  Identities=28%  Similarity=0.504  Sum_probs=35.2

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoq_A            7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP-SGPSSG   46 (46)
T ss_dssp             SSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS-SSCCCC
T ss_pred             CCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            4455569999999999999999999999999887 999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.8e-11  Score=61.27  Aligned_cols=41  Identities=22%  Similarity=0.395  Sum_probs=35.0

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emm_A            6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCT-TSSSCC
T ss_pred             CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            34455569999999999999999999999998877 999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.4e-11  Score=60.77  Aligned_cols=41  Identities=24%  Similarity=0.510  Sum_probs=35.9

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC-CCSCCC
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            34555669999999999999999999999999887 999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.5e-11  Score=60.73  Aligned_cols=41  Identities=20%  Similarity=0.340  Sum_probs=35.6

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|+.|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENP-SGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC-SCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            34555569999999999999999999999999887 999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.17  E-value=1.8e-11  Score=61.22  Aligned_cols=40  Identities=20%  Similarity=0.346  Sum_probs=34.9

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2el4_A            7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP-SGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCC-SCCTTC
T ss_pred             CCCCCceECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            4455569999999999999999999999999887 999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.4e-11  Score=60.27  Aligned_cols=41  Identities=20%  Similarity=0.466  Sum_probs=36.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|+.|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2elz_A            6 SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT-SGPSSG   46 (46)
T ss_dssp             CCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC-CCSCCC
T ss_pred             CCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            45666679999999999999999999999999888 999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.2e-11  Score=60.92  Aligned_cols=41  Identities=22%  Similarity=0.437  Sum_probs=35.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eoe_A            6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCS-CSSCCC
T ss_pred             CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            34555569999999999999999999999999877 999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.1e-11  Score=61.06  Aligned_cols=41  Identities=20%  Similarity=0.400  Sum_probs=35.3

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emp_A            6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSC-CSCCCC
T ss_pred             ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            34455569999999999999999999999999887 999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.2e-11  Score=60.93  Aligned_cols=41  Identities=24%  Similarity=0.530  Sum_probs=35.2

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emy_A            6 SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCC-SCSSCC
T ss_pred             CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCC-CCCCCC
Confidence            34455569999999999999999999999999877 999887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.17  E-value=2.7e-11  Score=60.67  Aligned_cols=41  Identities=27%  Similarity=0.484  Sum_probs=36.0

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS-CSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            45556669999999999999999999999999877 999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.9e-11  Score=61.19  Aligned_cols=41  Identities=22%  Similarity=0.496  Sum_probs=35.3

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCC-CSCCCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCC-CCCCCC
Confidence            34455569999999999999999999999998877 999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.17  E-value=4.3e-12  Score=73.94  Aligned_cols=75  Identities=20%  Similarity=0.388  Sum_probs=64.1

Q ss_pred             cCCCccccCc--ccccccChHHHHhhhhhhcCCCCCeecc--CCcccccChHHHHhHHhhhccHHHHHHHHhhccCcccc
Q psy12022         63 NHAEMFACDV--CGKEYKQKYGLNRHKKYDCGQEPKYQCL--YCPYRAKLRFNLKTHINVKHSYEYIRIILRTAIMPSVS  138 (143)
Q Consensus        63 ~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~  138 (143)
                      ...++|.|..  |++.|.....|..|++.|+++++ |.|.  .|++.|.....|..|+++|++++.+.+..+...+...+
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP-YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCC-EECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCC-eeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHH
Confidence            4456799986  99999999999999999998777 9996  69999999999999999999888777776666665443

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.17  E-value=2.4e-11  Score=60.81  Aligned_cols=41  Identities=22%  Similarity=0.485  Sum_probs=35.0

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCC-CSSSCC
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            34455569999999999999999999999999887 999877

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.9e-11  Score=61.26  Aligned_cols=40  Identities=18%  Similarity=0.299  Sum_probs=34.5

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoo_A            7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS-SGPSSG   46 (46)
T ss_dssp             CSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTS-SCCSCC
T ss_pred             CCCCCCEEccccCcccCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            4455569999999999999999999999998877 999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.2e-11  Score=60.97  Aligned_cols=41  Identities=24%  Similarity=0.512  Sum_probs=35.2

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSC-SSSCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            34455569999999999999999999999999887 999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.1e-11  Score=61.07  Aligned_cols=40  Identities=23%  Similarity=0.477  Sum_probs=34.6

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em5_A            7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCC-SSCCCC
T ss_pred             CCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            4445559999999999999999999999998877 999887

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=1.8e-11  Score=61.94  Aligned_cols=43  Identities=33%  Similarity=0.643  Sum_probs=39.2

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPY  104 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~  104 (143)
                      .+.++++|.|.+|++.|.....|..|+++|+++++ |.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKP-YSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCC-CCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCC-ccCCCCCC
Confidence            45677889999999999999999999999999888 99999985

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.5e-11  Score=60.16  Aligned_cols=41  Identities=20%  Similarity=0.312  Sum_probs=35.8

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP-SGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCS-CSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            35566679999999999999999999999998877 999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.1e-11  Score=61.03  Aligned_cols=41  Identities=27%  Similarity=0.540  Sum_probs=35.6

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytg_A            6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCS-SCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            34555569999999999999999999999999887 999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.16  E-value=2.7e-11  Score=60.58  Aligned_cols=41  Identities=20%  Similarity=0.429  Sum_probs=35.3

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em9_A            6 SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP-SGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC-CSTTCC
T ss_pred             CCCCCcCeECCccccccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            34555569999999999999999999999998877 999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.5e-11  Score=60.76  Aligned_cols=41  Identities=22%  Similarity=0.432  Sum_probs=35.1

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|+.|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~c   46 (46)
T 2ytk_A            6 SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSC-SSCCCC
T ss_pred             cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCC-CCCCCC
Confidence            34455569999999999999999999999998877 999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.8e-11  Score=60.56  Aligned_cols=41  Identities=24%  Similarity=0.485  Sum_probs=35.0

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSC-CSSCCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            34455569999999999999999999999998877 999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.2e-11  Score=60.32  Aligned_cols=41  Identities=27%  Similarity=0.549  Sum_probs=35.8

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC-CSSCCC
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            45555669999999999999999999999999887 999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.9e-11  Score=60.53  Aligned_cols=41  Identities=22%  Similarity=0.470  Sum_probs=35.4

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytd_A            6 SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP-SGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCS-SCSSCC
T ss_pred             ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCC-CCCCCC
Confidence            34555569999999999999999999999999887 999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.7e-11  Score=60.63  Aligned_cols=40  Identities=23%  Similarity=0.405  Sum_probs=34.2

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ytj_A            7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP-SGPSSG   46 (46)
T ss_dssp             TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCC-SSCSCC
T ss_pred             CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            4455569999999999999999999999998777 999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.6e-11  Score=60.66  Aligned_cols=41  Identities=22%  Similarity=0.506  Sum_probs=35.1

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|+.|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ep2_A            6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCS-CCSCCC
T ss_pred             CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            34455569999999999999999999999998877 999887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.3e-11  Score=60.86  Aligned_cols=41  Identities=24%  Similarity=0.483  Sum_probs=35.8

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCC-SCSCCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            34555669999999999999999999999999887 999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.8e-11  Score=60.61  Aligned_cols=41  Identities=27%  Similarity=0.502  Sum_probs=35.0

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSC-SCCCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            34555569999999999999999999999998877 999877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.6e-11  Score=60.19  Aligned_cols=41  Identities=22%  Similarity=0.373  Sum_probs=36.1

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS-SCCCCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            45566669999999999999999999999999887 999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.3e-11  Score=59.91  Aligned_cols=41  Identities=20%  Similarity=0.405  Sum_probs=36.6

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP-SGPSSG   46 (46)
T ss_dssp             CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC-CCCCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            45566679999999999999999999999999887 999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.15  E-value=1.2e-11  Score=71.50  Aligned_cols=57  Identities=19%  Similarity=0.292  Sum_probs=50.4

Q ss_pred             ccccCcccccccChHHHHhhhhh-hcCCCCC--------eeccCCcccccChHHHHhHHhhhccHHH
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKY-DCGQEPK--------YQCLYCPYRAKLRFNLKTHINVKHSYEY  124 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~-h~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~  124 (143)
                      .++|..|++.|.....|..|++. |.++ ++        |.|.+|++.|.....|..|+++|++++.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~-~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   90 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGG-PEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS   90 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCC-TTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCC-CCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            37899999999999999999998 7664 43        8999999999999999999999987654

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.6e-11  Score=60.66  Aligned_cols=41  Identities=22%  Similarity=0.456  Sum_probs=35.2

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCC-SCCSCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            34555669999999999999999999999998877 999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.15  E-value=3e-11  Score=66.26  Aligned_cols=63  Identities=27%  Similarity=0.620  Sum_probs=55.1

Q ss_pred             CCCCcccCCCCCCCCCc--cccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCc--ccccccChHHH
Q psy12022          8 SWPGEKQNHAEMFACDV--CGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDV--CGKEYKQKYGL   83 (143)
Q Consensus         8 ~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~--C~~~~~~~~~l   83 (143)
                      .-+.......++|.|..  |++.|.....|..|++.|.+.++                    |.|..  |++.|.....|
T Consensus         6 ~~~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~--------------------~~C~~~~C~k~f~~~~~l   65 (72)
T 2epa_A            6 SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP--------------------FSCSWKGCERRFARSDEL   65 (72)
T ss_dssp             CCCCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS--------------------EECCCTTCCCEESSHHHH
T ss_pred             CCCCCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCC--------------------ccCCCCCCCcccCCHHHH
Confidence            34455677888999999  99999999999999999988877                    99964  99999999999


Q ss_pred             Hhhhhhh
Q psy12022         84 NRHKKYD   90 (143)
Q Consensus        84 ~~h~~~h   90 (143)
                      ..|+++|
T Consensus        66 ~~H~~~H   72 (72)
T 2epa_A           66 SRHRRTH   72 (72)
T ss_dssp             HHHTTTC
T ss_pred             HhHhhcC
Confidence            9998765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=3.2e-11  Score=60.33  Aligned_cols=41  Identities=20%  Similarity=0.388  Sum_probs=35.7

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCC-SSTTCC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            45556669999999999999999999999998887 999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3e-11  Score=60.43  Aligned_cols=41  Identities=17%  Similarity=0.196  Sum_probs=35.1

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH-SGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCC-SCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            34455569999999999999999999999998877 999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.9e-11  Score=60.50  Aligned_cols=41  Identities=20%  Similarity=0.305  Sum_probs=35.0

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |+|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC-SGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCS-SCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            34455569999999999999999999999998877 999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.3e-11  Score=60.34  Aligned_cols=41  Identities=22%  Similarity=0.422  Sum_probs=36.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL-SGPSSG   46 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCC-CCSCCC
T ss_pred             CCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            45666679999999999999999999999999888 999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.3e-11  Score=60.28  Aligned_cols=41  Identities=24%  Similarity=0.512  Sum_probs=35.1

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCC-SCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            34555569999999999999999999999998877 999887

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.8e-11  Score=60.60  Aligned_cols=41  Identities=20%  Similarity=0.383  Sum_probs=37.7

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP-SGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC-CSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            57778889999999999999999999999999888 999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.4e-11  Score=60.27  Aligned_cols=41  Identities=24%  Similarity=0.475  Sum_probs=35.7

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en6_A            6 SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCC-SSSCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCC-CCCCCC
Confidence            45556669999999999999999999999998887 999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.13  E-value=4.5e-11  Score=59.83  Aligned_cols=41  Identities=17%  Similarity=0.311  Sum_probs=36.2

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP-SGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSC-CSCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            45666679999999999999999999999999887 999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=4.8e-11  Score=59.70  Aligned_cols=41  Identities=20%  Similarity=0.263  Sum_probs=35.6

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |+|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKN-SGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSC-CCTTCC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            35555669999999999999999999999998887 999887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.4e-11  Score=59.81  Aligned_cols=41  Identities=22%  Similarity=0.449  Sum_probs=34.0

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~   46 (46)
T 2ep3_A            6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCC-CCTTCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            34455569999999999999999999999988777 998865

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=4.7e-11  Score=59.74  Aligned_cols=41  Identities=20%  Similarity=0.395  Sum_probs=35.9

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2enc_A            6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSC-CSSCCC
T ss_pred             CCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            45566679999999999999999999999998877 999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.6e-11  Score=60.16  Aligned_cols=41  Identities=27%  Similarity=0.574  Sum_probs=35.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP-SGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCS-SCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCC-CCCCCC
Confidence            45556669999999999999999999999998777 999887

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.1e-11  Score=59.96  Aligned_cols=41  Identities=22%  Similarity=0.450  Sum_probs=37.2

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCC-CSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            56777889999999999999999999999999887 999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=3.2e-11  Score=60.09  Aligned_cols=36  Identities=22%  Similarity=0.474  Sum_probs=33.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   38 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG   38 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCC
Confidence            358899999999999999999999999999988877

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=7.3e-11  Score=59.21  Aligned_cols=41  Identities=27%  Similarity=0.470  Sum_probs=35.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhh-hhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKK-YDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|++ +|+++++ |.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~-~~C~~C   47 (47)
T 2epx_A            6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP-SGPSSG   47 (47)
T ss_dssp             CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS-SSCCCC
T ss_pred             ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCC-CCCCCC
Confidence            3555566999999999999999999999 9998877 999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=9.9e-11  Score=58.53  Aligned_cols=36  Identities=22%  Similarity=0.643  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT   40 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCC
Confidence            468999999999999999999999999999988877

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.09  E-value=9.4e-12  Score=66.55  Aligned_cols=48  Identities=15%  Similarity=0.389  Sum_probs=39.6

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHH
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLK  113 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~  113 (143)
                      |+++++|.|+.|++.|.....|.   ++|+++++ |.|.+|++.|.....+.
T Consensus         9 H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~-~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            9 STNRASFKCPVCSSTFTDLEANQ---LFDPMTGT-FRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH---HEETTTTE-EBCSSSCCBCEECTTCS
T ss_pred             cCCCCCccCCCCCchhccHHHhH---hhcCCCCC-EECCCCCCccccCcccc
Confidence            44555599999999999988776   78888777 99999999998776543

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.09  E-value=1.7e-10  Score=57.59  Aligned_cols=36  Identities=19%  Similarity=0.453  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|+.|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKP   40 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999988877

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.2e-10  Score=58.16  Aligned_cols=37  Identities=30%  Similarity=0.694  Sum_probs=33.9

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|++++||.|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytn_A            4 GSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKP   40 (46)
T ss_dssp             CCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC
T ss_pred             CcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCC
Confidence            3468999999999999999999999999999988877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.2e-10  Score=58.27  Aligned_cols=37  Identities=27%  Similarity=0.582  Sum_probs=34.0

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytq_A            4 GSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP   40 (46)
T ss_dssp             SSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS
T ss_pred             CcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCC
Confidence            3468999999999999999999999999999988887

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=7.7e-11  Score=59.55  Aligned_cols=45  Identities=31%  Similarity=0.716  Sum_probs=40.1

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccc
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGK   75 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~   75 (143)
                      ...+.++++|.|..|++.|.....|..|++.|.++++                    |.|.+|++
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~--------------------~~C~~C~k   48 (48)
T 2epr_A            4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKP--------------------YSSGPSSG   48 (48)
T ss_dssp             CSCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCC--------------------CCSCCCCC
T ss_pred             CCCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCC--------------------ccCCCCCC
Confidence            3457889999999999999999999999999988877                    89999875

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=58.00  Aligned_cols=36  Identities=28%  Similarity=0.694  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.+.++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytr_A            5 SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP   40 (46)
T ss_dssp             CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC
T ss_pred             cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            468999999999999999999999999999988877

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.07  E-value=3.1e-11  Score=62.62  Aligned_cols=49  Identities=20%  Similarity=0.375  Sum_probs=41.8

Q ss_pred             cccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         74 GKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        74 ~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      ++.|.....|..|+++|+++++ |.|.+|++.|...+.|..|+++|++++
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQP-ATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCC-EECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             ccccCCCcchhhHHHhcCCCCC-ccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            3567777788889999988777 999999999999999999999988764

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=58.00  Aligned_cols=36  Identities=31%  Similarity=0.737  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP   40 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCC
Confidence            468899999999999999999999999999988877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.5e-10  Score=57.79  Aligned_cols=36  Identities=22%  Similarity=0.499  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENP   40 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999988887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.06  E-value=9.5e-11  Score=58.60  Aligned_cols=37  Identities=22%  Similarity=0.513  Sum_probs=34.3

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|+++++|.|+.|++.|.....|..|++.|.++++
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP   40 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4578999999999999999999999999999998887

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.4e-10  Score=58.01  Aligned_cols=41  Identities=24%  Similarity=0.480  Sum_probs=34.4

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~~   46 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCS-SCSSCC
T ss_pred             CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            35555669999999999999999999999988777 998865

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9e-11  Score=58.68  Aligned_cols=38  Identities=24%  Similarity=0.580  Sum_probs=34.6

Q ss_pred             CCcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         10 PGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        10 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ....|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP   40 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            34578999999999999999999999999999988877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1.2e-10  Score=58.13  Aligned_cols=36  Identities=22%  Similarity=0.554  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKP   40 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCC
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCC
Confidence            468899999999999999999999999999988877

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.2e-10  Score=58.21  Aligned_cols=36  Identities=31%  Similarity=0.683  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP   40 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            468999999999999999999999999999988877

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.4e-10  Score=57.92  Aligned_cols=36  Identities=31%  Similarity=0.728  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytg_A            5 SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP   40 (46)
T ss_dssp             CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCS
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            468899999999999999999999999999988887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.05  E-value=1.3e-10  Score=58.07  Aligned_cols=36  Identities=25%  Similarity=0.623  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKP   40 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999988877

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.9e-10  Score=57.42  Aligned_cols=36  Identities=22%  Similarity=0.660  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP   40 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCC
Confidence            468999999999999999999999999999988877

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.2e-10  Score=58.16  Aligned_cols=36  Identities=25%  Similarity=0.709  Sum_probs=33.6

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP   40 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCC
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCC
Confidence            468999999999999999999999999999988887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.05  E-value=1.1e-10  Score=58.36  Aligned_cols=36  Identities=31%  Similarity=0.663  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP   40 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999988877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.3e-10  Score=57.97  Aligned_cols=37  Identities=27%  Similarity=0.653  Sum_probs=33.9

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|++++||.|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2eoe_A            4 GSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKP   40 (46)
T ss_dssp             SSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCS
T ss_pred             CCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCC
Confidence            3468999999999999999999999999999988887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.6e-10  Score=57.73  Aligned_cols=36  Identities=31%  Similarity=0.673  Sum_probs=33.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|+..|.++++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP   40 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCC
Confidence            468899999999999999999999999999988877

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=58.35  Aligned_cols=36  Identities=22%  Similarity=0.574  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP   40 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999988877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.04  E-value=1.4e-10  Score=57.90  Aligned_cols=36  Identities=22%  Similarity=0.498  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2el4_A            5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP   40 (46)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCC
T ss_pred             cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            468899999999999999999999999999988887

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=58.13  Aligned_cols=37  Identities=27%  Similarity=0.668  Sum_probs=34.2

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      +..|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP   40 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCC
Confidence            4578999999999999999999999999999988887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=58.17  Aligned_cols=36  Identities=25%  Similarity=0.677  Sum_probs=33.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP   40 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCC
Confidence            468899999999999999999999999999988877

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.03  E-value=1.6e-10  Score=57.71  Aligned_cols=36  Identities=22%  Similarity=0.600  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.+.++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP   40 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCC
Confidence            468899999999999999999999999999988877

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.03  E-value=2.2e-10  Score=56.42  Aligned_cols=40  Identities=15%  Similarity=0.268  Sum_probs=35.1

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|..|++.|.....|..|+++|+++++ |.|.+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKS-GPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTC-SSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCC-ccCCC
Confidence            46777889999999999999999999999998887 98864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.1e-10  Score=56.65  Aligned_cols=40  Identities=25%  Similarity=0.542  Sum_probs=33.4

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|+.|++.|.....|..|+++|+++++ |.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCC-CCCCC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            34455569999999999999999999999998877 98864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.5e-10  Score=57.01  Aligned_cols=40  Identities=25%  Similarity=0.490  Sum_probs=32.9

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|+.|++.|.....|..|+++|+++++ |.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enf_A            6 SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSC-CCCSC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCC-CCCCC
Confidence            34455569999999999999999999999988777 98864

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.7e-10  Score=57.57  Aligned_cols=36  Identities=25%  Similarity=0.509  Sum_probs=33.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.+.++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH   40 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCC
Confidence            468899999999999999999999999999988877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1e-10  Score=57.92  Aligned_cols=36  Identities=22%  Similarity=0.468  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.+.++
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP   38 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCS
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            468999999999999999999999999999988887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.6e-10  Score=57.13  Aligned_cols=37  Identities=32%  Similarity=0.689  Sum_probs=33.8

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccc-cccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKK-YDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~   47 (143)
                      ...|++++||.|..|++.|.....|..|++ .|.+.++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~   41 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP   41 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCC
Confidence            346899999999999999999999999999 8988877

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.4e-10  Score=57.95  Aligned_cols=36  Identities=25%  Similarity=0.632  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKP   40 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            468899999999999999999999999999988877

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.03  E-value=1.4e-10  Score=57.96  Aligned_cols=36  Identities=25%  Similarity=0.665  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP   40 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCC
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCC
Confidence            468999999999999999999999999999988887

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=7.1e-13  Score=72.89  Aligned_cols=52  Identities=15%  Similarity=0.261  Sum_probs=44.6

Q ss_pred             CCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHHH
Q psy12022         65 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYEY  124 (143)
Q Consensus        65 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  124 (143)
                      +++|.|+.|++.|.....|..       +++ |.|.+|++.|.....|..|+++|++++.
T Consensus        16 ~~~~~C~~C~k~f~~~~~l~~-------~~~-~~C~~C~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A           16 DRSQKCSKCGIIFIRRSTLSR-------RKT-PMCEKCRKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             CSEEECSSSCCEEECCCCCCC-------SSS-CCCHHHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred             CCCeeCCcccchhCCHHHhCc-------CCC-CCCCCCChhhcCHHHHHHHHHhhcCCCC
Confidence            334999999999998877765       466 9999999999999999999999887654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.2e-10  Score=56.55  Aligned_cols=39  Identities=23%  Similarity=0.486  Sum_probs=32.7

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      |+++++|.|..|++.|.....|..|+++|+++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ep1_A            7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENP-SGPSS   45 (46)
T ss_dssp             CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCC-CSSSC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4455559999999999999999999999988777 98864

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.6e-10  Score=57.74  Aligned_cols=36  Identities=25%  Similarity=0.643  Sum_probs=33.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em5_A            5 SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKP   40 (46)
T ss_dssp             CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCC
T ss_pred             CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCC
Confidence            468899999999999999999999999999988877

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.2e-10  Score=56.59  Aligned_cols=39  Identities=26%  Similarity=0.553  Sum_probs=32.5

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      |+++++|.|+.|++.|.....|..|+++|+++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yth_A            7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCC-SSCCC
T ss_pred             CCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            4455569999999999999999999999988777 98864

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-10  Score=58.14  Aligned_cols=37  Identities=24%  Similarity=0.607  Sum_probs=34.0

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|++++||.|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP   40 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCC
Confidence            3568999999999999999999999999999988877

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.02  E-value=2.2e-10  Score=57.24  Aligned_cols=39  Identities=23%  Similarity=0.473  Sum_probs=31.4

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      |+++++|.|.+|++.|.....|..|+++|+++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emj_A            7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCS-SSSCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4445558999999999999999999988888777 88864

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=58.01  Aligned_cols=36  Identities=31%  Similarity=0.766  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP   40 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCS
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            468899999999999999999999999999988887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.6e-10  Score=57.73  Aligned_cols=36  Identities=25%  Similarity=0.689  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|+.|++.|.....|..|+..|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ep2_A            5 SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP   40 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCS
T ss_pred             CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            468999999999999999999999999999988887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=58.33  Aligned_cols=36  Identities=28%  Similarity=0.716  Sum_probs=33.6

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.+.++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKP   40 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999998887

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.7e-10  Score=56.88  Aligned_cols=40  Identities=25%  Similarity=0.506  Sum_probs=32.9

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yti_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCC-SSTTC
T ss_pred             CCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCC-CCCCC
Confidence            34455569999999999999999999999988777 98864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.9e-10  Score=56.77  Aligned_cols=39  Identities=28%  Similarity=0.522  Sum_probs=32.1

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      |+++++|.|.+|++.|.....|..|+++|+++++ |.|.+
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2em3_A            7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKP-SGPSS   45 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCC-CCSCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4455559999999999999999999999988777 88864

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.01  E-value=9.7e-11  Score=60.68  Aligned_cols=51  Identities=22%  Similarity=0.352  Sum_probs=42.8

Q ss_pred             ccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhcCCCCCe
Q psy12022         26 GKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKY   97 (143)
Q Consensus        26 ~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~   97 (143)
                      ++.|.+...|..|++.|.+..+                    |.|.+|++.|.....|..|+++|+++++ |
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~--------------------~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQP--------------------ATCPICYAVIRQSRNLRRHLELRHFAKP-G   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCC--------------------EECTTTCCEESSHHHHHHHHHHHTTTSC-C
T ss_pred             ccccCCCcchhhHHHhcCCCCC--------------------ccCCCCCcccCCHHHHHHHHHHhccCCC-C
Confidence            4566777777777777776666                    9999999999999999999999999877 6

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=57.58  Aligned_cols=37  Identities=27%  Similarity=0.606  Sum_probs=33.9

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|++++||.|..|++.|.....|..|++.|.+.++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emm_A            4 GSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP   40 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCT
T ss_pred             cCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCC
Confidence            3468999999999999999999999999999988887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2e-10  Score=57.35  Aligned_cols=36  Identities=28%  Similarity=0.664  Sum_probs=33.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|+.|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eme_A            5 SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP   40 (46)
T ss_dssp             CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSC
T ss_pred             CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCC
Confidence            468899999999999999999999999999988877

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.1e-10  Score=56.19  Aligned_cols=40  Identities=23%  Similarity=0.487  Sum_probs=33.7

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2en9_A            6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCC-CSCCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            35555669999999999999999999999998877 98864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=3.7e-10  Score=56.36  Aligned_cols=40  Identities=28%  Similarity=0.463  Sum_probs=33.0

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2emg_A            6 SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERP-SGPSS   45 (46)
T ss_dssp             CCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCC-SCSCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            34555569999999999999999999999988777 98864

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.01  E-value=3.1e-10  Score=55.46  Aligned_cols=38  Identities=21%  Similarity=0.452  Sum_probs=29.4

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2el5_A            5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESG-PSSG   42 (42)
T ss_dssp             SSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCS-CCCC
T ss_pred             CCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCC-CCCC
Confidence            4555568888888888888888888888887766 8774

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2e-10  Score=57.31  Aligned_cols=36  Identities=22%  Similarity=0.460  Sum_probs=33.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|+.|++.|.....|..|+..|.++++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC   40 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCS
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCC
Confidence            468899999999999999999999999999988877

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=3.4e-10  Score=56.55  Aligned_cols=40  Identities=20%  Similarity=0.366  Sum_probs=35.3

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCC-SSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCC-CCCCC
Confidence            56777889999999999999999999999999887 99863

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.9e-10  Score=56.73  Aligned_cols=39  Identities=21%  Similarity=0.493  Sum_probs=31.6

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      |+++++|.|.+|++.|.....|..|+++|+++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eow_A            7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKP-SGPSS   45 (46)
T ss_dssp             SCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSC-SCTTC
T ss_pred             CCCCCCeeccccCChhcCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4455558999999999999999999988888777 88864

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=58.17  Aligned_cols=37  Identities=27%  Similarity=0.636  Sum_probs=34.1

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL   40 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCC
Confidence            4568999999999999999999999999999988887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=57.40  Aligned_cols=36  Identities=28%  Similarity=0.695  Sum_probs=33.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|+++++|.|..|++.|.....|..|+..|.++++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP   40 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCC
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999988877

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=3e-10  Score=56.72  Aligned_cols=40  Identities=25%  Similarity=0.448  Sum_probs=32.3

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em4_A            6 SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSC-CCCCC
T ss_pred             ccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            34555568999999999999999999999988777 88864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3.8e-10  Score=56.32  Aligned_cols=40  Identities=30%  Similarity=0.586  Sum_probs=32.7

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|..|++.|.....|..|+++|+++++ |.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em6_A            6 SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCC-CCTTC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            34455569999999999999999999999988777 98864

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=58.24  Aligned_cols=36  Identities=19%  Similarity=0.445  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|+.|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoo_A            5 SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS   40 (46)
T ss_dssp             CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTS
T ss_pred             CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999988877

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3e-10  Score=56.64  Aligned_cols=39  Identities=31%  Similarity=0.601  Sum_probs=31.8

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      |+++++|.|+.|++.|.....|..|+++|+++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p-~~C~~   45 (46)
T 2yts_A            7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCS-SCCCC
T ss_pred             CCCCcCEECCCCChhhCChHHHHHHHHhcCCCCC-cCCCC
Confidence            4455558999999999999999999999988777 88864

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=57.75  Aligned_cols=36  Identities=19%  Similarity=0.336  Sum_probs=33.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH   40 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            468899999999999999999999999999988877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=57.80  Aligned_cols=36  Identities=25%  Similarity=0.647  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP   40 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCS
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCC
Confidence            468899999999999999999999999999988877

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.8e-10  Score=56.84  Aligned_cols=40  Identities=23%  Similarity=0.481  Sum_probs=33.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERP-SGPSS   45 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCS-CTTSC
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCC-CCCCC
Confidence            45566669999999999999999999999988777 98864

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=57.47  Aligned_cols=36  Identities=25%  Similarity=0.564  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.+.++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP   40 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCC
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999988887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=58.22  Aligned_cols=37  Identities=30%  Similarity=0.695  Sum_probs=34.0

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP   40 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCC
Confidence            3468999999999999999999999999999988887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.6e-10  Score=57.71  Aligned_cols=36  Identities=25%  Similarity=0.604  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP   40 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCC
Confidence            468999999999999999999999999999988877

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3e-10  Score=56.63  Aligned_cols=39  Identities=21%  Similarity=0.502  Sum_probs=31.4

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      |+++++|.|..|++.|.....|..|+++|+++++ |.|.+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~~C~~   45 (46)
T 2eor_A            7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             SSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCC-SSSTT
T ss_pred             cCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            4445558899999999998889999988888777 88864

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=58.09  Aligned_cols=36  Identities=28%  Similarity=0.662  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKP   40 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCC
Confidence            468999999999999999999999999999988877

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.1e-10  Score=56.66  Aligned_cols=40  Identities=23%  Similarity=0.469  Sum_probs=31.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytp_A            6 SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             SSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCC-CSSCC
T ss_pred             CcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            34455568888898888888888888888888777 88863

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=5.1e-10  Score=54.63  Aligned_cols=39  Identities=13%  Similarity=0.277  Sum_probs=30.8

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      +|+++++|.|++|++.|.....|..|+++|+++++ |.|.
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSG-PSSG   42 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSS-CCCC
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            34555668888888888888888888888888776 8773

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=4.1e-10  Score=56.16  Aligned_cols=39  Identities=21%  Similarity=0.495  Sum_probs=32.0

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      |+++++|.|..|++.|.....|..|+++|+++++ |.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq1_A            7 GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCC-SSCCC
T ss_pred             cCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4445559999999999999999999999988777 88863

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=58.00  Aligned_cols=36  Identities=28%  Similarity=0.695  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emh_A            5 SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP   40 (46)
T ss_dssp             CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            468999999999999999999999999999988877

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.4e-10  Score=56.78  Aligned_cols=40  Identities=23%  Similarity=0.440  Sum_probs=34.4

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKS-GPSSG   45 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCC-CCSCC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCC-CCCCC
Confidence            56777789999999999999999999999988777 98864

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.7e-10  Score=57.62  Aligned_cols=37  Identities=24%  Similarity=0.460  Sum_probs=33.8

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|++++||.|..|++.|.....|..|++.|.+.++
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKN   40 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCC
Confidence            3468999999999999999999999999999988877

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.1e-10  Score=56.63  Aligned_cols=39  Identities=23%  Similarity=0.427  Sum_probs=31.1

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      |+++++|.|+.|++.|.....|..|+++|+++++ |.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytf_A            7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSS-SCCCC
T ss_pred             CCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4455558888899988888888888888888777 88864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4.1e-10  Score=55.54  Aligned_cols=38  Identities=21%  Similarity=0.397  Sum_probs=30.6

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|.+|++.|.....|..|+++|+++++ |.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2en7_A            7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG-PSSG   44 (44)
T ss_dssp             SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS-SCCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCC-CCCC
Confidence            4455558899999999999889999988888777 8874

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.4e-10  Score=57.92  Aligned_cols=36  Identities=22%  Similarity=0.568  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKP   40 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSC
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999988877

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4.4e-10  Score=54.87  Aligned_cols=37  Identities=30%  Similarity=0.546  Sum_probs=28.7

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeec
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQC   99 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C   99 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2ytb_A            6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP-SSG   42 (42)
T ss_dssp             CCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC-CCC
T ss_pred             cCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            4445558888888888888888888888888776 776

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4.5e-10  Score=56.01  Aligned_cols=39  Identities=26%  Similarity=0.510  Sum_probs=30.9

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2emi_A            6 SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKP-SGPS   44 (46)
T ss_dssp             SCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCC-CSCC
T ss_pred             ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCC-CCCC
Confidence            34455558888888888888888888888888777 8876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.1e-10  Score=56.65  Aligned_cols=36  Identities=25%  Similarity=0.624  Sum_probs=33.6

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKP   40 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCC
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999988887

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3e-10  Score=55.28  Aligned_cols=38  Identities=26%  Similarity=0.605  Sum_probs=30.3

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeec
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQC   99 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C   99 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP-SSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSC-SCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCC-cCC
Confidence            46667778888888888888888888888887776 776

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5.4e-10  Score=55.76  Aligned_cols=39  Identities=23%  Similarity=0.386  Sum_probs=32.1

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eoh_A            6 SGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERS-SGPS   44 (46)
T ss_dssp             SCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCS-CSTT
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            34555669999999999999999999999988777 8886

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.9e-10  Score=55.91  Aligned_cols=40  Identities=23%  Similarity=0.528  Sum_probs=33.9

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|..
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC-CCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            45666679999999999999999999999988777 98863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7e-10  Score=54.14  Aligned_cols=39  Identities=31%  Similarity=0.582  Sum_probs=35.1

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2ytb_A            4 GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP-SSG   42 (42)
T ss_dssp             CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC-CCC
T ss_pred             cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            468999999999999999999999999999998887 544

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.9e-10  Score=56.30  Aligned_cols=38  Identities=21%  Similarity=0.393  Sum_probs=30.2

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETL-SGPS   44 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCS-SSCC
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4445558888888888888888888888888777 8876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=8.7e-11  Score=65.17  Aligned_cols=52  Identities=27%  Similarity=0.393  Sum_probs=45.4

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      ++.|+.|++.|. ...|..|+ .+.++++ +.|..|++.|. ...|..|++++.+.
T Consensus        17 ~~~C~~C~~~~~-~~~L~~H~-~~c~~~~-~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A           17 LAVCQHCDLELS-ILKLKEHE-DYCGART-ELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CEECSSSCCEEC-HHHHHHHH-HHHHHCE-EECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             ccCCcccChHhh-HHHHHHHH-hHcCCCc-eEcccCCCcCc-HHHHHHHHHHccCC
Confidence            399999999995 78899999 7888788 99999999887 48999999987654

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.2e-10  Score=56.11  Aligned_cols=39  Identities=26%  Similarity=0.545  Sum_probs=30.7

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccC
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLY  101 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~  101 (143)
                      |+++++|.|..|++.|.....|..|+++|+++++ |.|..
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yrj_A            7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCS-SCSCC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4445558888888888888888888888888777 88763

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.5e-10  Score=55.42  Aligned_cols=38  Identities=18%  Similarity=0.377  Sum_probs=28.3

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|+.|++.|.....|..|+++|+++++ |.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eof_A            7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG-PSSG   44 (44)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSC-SCCC
T ss_pred             CCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCC-CCCC
Confidence            4444558888888888888888888888877666 7764

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.9e-10  Score=56.73  Aligned_cols=41  Identities=24%  Similarity=0.442  Sum_probs=36.7

Q ss_pred             cccCCCccccC--cccccccChHHHHhhhhhhcCCCCCeeccCC
Q psy12022         61 KQNHAEMFACD--VCGKEYKQKYGLNRHKKYDCGQEPKYQCLYC  102 (143)
Q Consensus        61 ~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C  102 (143)
                      .|+++++|.|.  .|++.|.....|..|+++|+++++ |+|.+|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS-CSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            56777889998  899999999999999999999887 999887

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=3.8e-10  Score=54.87  Aligned_cols=39  Identities=28%  Similarity=0.661  Sum_probs=35.1

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP-SSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSC-SCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCC-cCC
Confidence            468899999999999999999999999999998887 544

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=6.5e-10  Score=54.92  Aligned_cols=39  Identities=18%  Similarity=0.303  Sum_probs=32.5

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESG-PSSG   44 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC-CCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCC-CCCC
Confidence            45566679999999999999999999999988777 8874

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=5.4e-10  Score=55.77  Aligned_cols=39  Identities=18%  Similarity=0.381  Sum_probs=31.9

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      .|+++++|.|.+|++.|.....|..|+++|+++++ |.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2emz_A            6 SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKS-SGPS   44 (46)
T ss_dssp             CSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTC-CCSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            34555568999999999999999999999988777 8886

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=7.1e-10  Score=54.19  Aligned_cols=39  Identities=21%  Similarity=0.609  Sum_probs=35.1

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP-SSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS-TTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCC-CCC
Confidence            468899999999999999999999999999998887 544

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=5.2e-10  Score=55.24  Aligned_cols=38  Identities=16%  Similarity=0.303  Sum_probs=27.7

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG-PSSG   44 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCS-SCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCC-CCCC
Confidence            4444558888888888888888888888877666 7763

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=8.7e-10  Score=55.01  Aligned_cols=37  Identities=27%  Similarity=0.670  Sum_probs=34.3

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|++++||.|..|++.|.....|..|++.|.+.++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERP   40 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCC
Confidence            4568999999999999999999999999999998887

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5e-10  Score=55.89  Aligned_cols=38  Identities=24%  Similarity=0.491  Sum_probs=29.1

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|.+|++.|.....|..|+++|+++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yto_A            7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH-SGPS   44 (46)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCB-TTTB
T ss_pred             cCCCCCEECcccCCccCCHhHHHHHHHHcCCCCC-CCCC
Confidence            4444558888888888888888888888887766 8775

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.6e-10  Score=55.10  Aligned_cols=38  Identities=26%  Similarity=0.398  Sum_probs=28.8

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eoj_A            7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG-PSSG   44 (44)
T ss_dssp             SSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCS-CCCC
T ss_pred             cCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            4445558888888888888888888888877666 7774

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=5.8e-10  Score=55.05  Aligned_cols=38  Identities=13%  Similarity=0.295  Sum_probs=28.1

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2emb_A            7 GHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSG-PSSG   44 (44)
T ss_dssp             CCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCC-TTCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCCC
Confidence            4444558888888888888888888888877666 7763

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=7.7e-10  Score=55.12  Aligned_cols=38  Identities=21%  Similarity=0.525  Sum_probs=31.3

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|+.|++.|.....|..|+++|+++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eq3_A            7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKP-SGPS   44 (46)
T ss_dssp             SCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCC-CCSC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4455558999999999999999999999988777 8886

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=6.2e-10  Score=55.53  Aligned_cols=38  Identities=16%  Similarity=0.333  Sum_probs=28.7

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcC-CCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCG-QEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~-~~~~~~C~  100 (143)
                      |+++++|.|..|++.|.....|..|+++|++ +++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~~C~   45 (46)
T 2eoy_A            7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKS-GPSS   45 (46)
T ss_dssp             CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTT-SSSC
T ss_pred             cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCC-CCCC
Confidence            4444558888888888888888888888877 666 8775

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.9e-10  Score=54.19  Aligned_cols=37  Identities=22%  Similarity=0.459  Sum_probs=27.3

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeec
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQC   99 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C   99 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP-SSG   42 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCS-SCC
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCC-CCC
Confidence            4455557888888888888888888888877666 765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.4e-10  Score=56.10  Aligned_cols=37  Identities=30%  Similarity=0.701  Sum_probs=34.0

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2em2_A            4 GSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP   40 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCC
Confidence            3468999999999999999999999999999988887

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=9.5e-10  Score=54.83  Aligned_cols=40  Identities=25%  Similarity=0.627  Sum_probs=35.4

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ...|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKP-SGP   43 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC-CCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            3468999999999999999999999999999998887 443

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.92  E-value=9.2e-10  Score=53.69  Aligned_cols=37  Identities=22%  Similarity=0.437  Sum_probs=27.0

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeec
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQC   99 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C   99 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~-~~C   42 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP-SSG   42 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCC-CCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCC-CCC
Confidence            4455557788888888877778888877777666 765

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=7.9e-10  Score=53.94  Aligned_cols=36  Identities=14%  Similarity=0.368  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.+.++
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSG   38 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSS
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            458899999999999999999999999999998887

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=7.8e-10  Score=54.03  Aligned_cols=37  Identities=19%  Similarity=0.574  Sum_probs=26.0

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeec
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQC   99 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C   99 (143)
                      |+++++|.|++|++.|.....|..|+++|+++++ |.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP-SSG   42 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS-TTC
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCC-CCC
Confidence            4445557777777777777777777777777665 665

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.91  E-value=8.1e-10  Score=54.34  Aligned_cols=36  Identities=17%  Similarity=0.394  Sum_probs=33.6

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   38 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKS   38 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCC
Confidence            468899999999999999999999999999998887

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.4e-09  Score=54.19  Aligned_cols=36  Identities=28%  Similarity=0.696  Sum_probs=33.7

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKP   40 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            468999999999999999999999999999998887

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.1e-10  Score=54.74  Aligned_cols=38  Identities=21%  Similarity=0.510  Sum_probs=29.3

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|.+|++.|.....|..|+++|+++++ |.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG-PSSG   44 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCC-CSCC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4445558888888888888888888888887776 8763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6e-10  Score=55.55  Aligned_cols=38  Identities=18%  Similarity=0.359  Sum_probs=28.6

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |+++++|.|.+|++.|.....|..|+++|+++++ |.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2en3_A            7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP-SGPS   44 (46)
T ss_dssp             SCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCC-SSCS
T ss_pred             cCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            3444558888888888888888888888887766 7775

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.91  E-value=7.6e-10  Score=54.03  Aligned_cols=36  Identities=22%  Similarity=0.535  Sum_probs=33.6

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESG   38 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCS
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCC
Confidence            468899999999999999999999999999998887

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.3e-09  Score=54.34  Aligned_cols=37  Identities=30%  Similarity=0.680  Sum_probs=34.1

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|+++++|.|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKP   40 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSC
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCC
Confidence            3468999999999999999999999999999998887

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.4e-09  Score=54.22  Aligned_cols=39  Identities=26%  Similarity=0.564  Sum_probs=34.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.+.++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2yti_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGP   43 (46)
T ss_dssp             CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCC-SST
T ss_pred             cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCC-CCC
Confidence            468899999999999999999999999999998887 443

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.3e-09  Score=53.64  Aligned_cols=39  Identities=21%  Similarity=0.426  Sum_probs=34.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG-PSS   43 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS-SCC
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCC-CCC
Confidence            468999999999999999999999999999998887 443

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.4e-09  Score=54.13  Aligned_cols=39  Identities=28%  Similarity=0.520  Sum_probs=34.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERP-SGP   43 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCC-SCS
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCC-CCC
Confidence            468899999999999999999999999999998887 443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.9e-10  Score=54.88  Aligned_cols=37  Identities=27%  Similarity=0.628  Sum_probs=34.2

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|+++++|+|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKS   40 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCC
Confidence            4568999999999999999999999999999998887

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.7e-09  Score=53.82  Aligned_cols=39  Identities=23%  Similarity=0.532  Sum_probs=35.0

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENP-SGP   43 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCC-CSS
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            468899999999999999999999999999998887 444

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.7e-09  Score=53.92  Aligned_cols=39  Identities=26%  Similarity=0.599  Sum_probs=34.8

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKP-SGP   43 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCC-SSC
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCC-CCC
Confidence            468899999999999999999999999999998887 443

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.1e-09  Score=54.04  Aligned_cols=39  Identities=26%  Similarity=0.427  Sum_probs=35.0

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.+.++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG-PSS   43 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCS-CCC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCC-CCC
Confidence            468999999999999999999999999999998887 443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.3e-09  Score=54.35  Aligned_cols=36  Identities=25%  Similarity=0.494  Sum_probs=33.7

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERS   40 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCS
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCC
Confidence            468899999999999999999999999999998887

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.2e-10  Score=54.66  Aligned_cols=39  Identities=23%  Similarity=0.499  Sum_probs=35.1

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP-SSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCS-SCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCC-CCC
Confidence            468899999999999999999999999999998887 544

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.88  E-value=6.8e-10  Score=54.18  Aligned_cols=39  Identities=23%  Similarity=0.479  Sum_probs=35.2

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~-~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP-SSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCC-CCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCC-CCC
Confidence            468899999999999999999999999999999887 544

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.88  E-value=8.8e-10  Score=52.24  Aligned_cols=35  Identities=20%  Similarity=0.279  Sum_probs=28.4

Q ss_pred             hhhhhcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         86 HKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        86 h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |+++|+++++ |.|.+|++.|.....|..|+++|.+
T Consensus         2 H~~~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKP-FQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSS-BCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCC-ccCCCCCcccCcHHHHHHHHHHhcc
Confidence            6677877777 8888888888888888888888765

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.1e-09  Score=54.97  Aligned_cols=37  Identities=30%  Similarity=0.659  Sum_probs=33.9

Q ss_pred             CcccCCCCCCCCC--ccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACD--VCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|++++||.|.  .|++.|.....|..|++.|.++++
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   42 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP   42 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            4578999999998  899999999999999999988877

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.8e-09  Score=53.79  Aligned_cols=39  Identities=31%  Similarity=0.646  Sum_probs=34.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP-SGP   43 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCC-CCT
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCC
Confidence            468999999999999999999999999999998887 443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.7e-09  Score=53.89  Aligned_cols=39  Identities=21%  Similarity=0.541  Sum_probs=34.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKP-SGP   43 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCC-SSC
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCC-CCC
Confidence            468899999999999999999999999999998887 444

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.2e-09  Score=54.49  Aligned_cols=40  Identities=23%  Similarity=0.465  Sum_probs=35.4

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ...|+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKP-SGP   43 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCC-SSC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCC-CCC
Confidence            3468899999999999999999999999999998887 443

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=54.61  Aligned_cols=36  Identities=25%  Similarity=0.615  Sum_probs=33.7

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKP   40 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCC
Confidence            468899999999999999999999999999998887

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.3e-09  Score=54.30  Aligned_cols=40  Identities=25%  Similarity=0.586  Sum_probs=35.5

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ...|+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKP-SGP   43 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCC-CSC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCC-CCC
Confidence            3468999999999999999999999999999998887 444

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.3e-09  Score=54.34  Aligned_cols=39  Identities=26%  Similarity=0.539  Sum_probs=35.0

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKP-SGP   43 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCC-CSC
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCC-CCC
Confidence            468999999999999999999999999999998887 444

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=2.1e-09  Score=53.02  Aligned_cols=37  Identities=22%  Similarity=0.377  Sum_probs=23.6

Q ss_pred             ccCCCccccCcccccccChHHHHhhhhhhcCCCCCeec
Q psy12022         62 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQC   99 (143)
Q Consensus        62 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C   99 (143)
                      |+++++|.|.+|++.|.....|..|+++|+++++ |.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~~   43 (44)
T 2epv_A            7 GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG-PSS   43 (44)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC-CCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC-CCC
Confidence            3444446777777777777777777776666555 654

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.7e-09  Score=53.81  Aligned_cols=36  Identities=33%  Similarity=0.746  Sum_probs=33.7

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p   40 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP   40 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCS
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCC
Confidence            468899999999999999999999999999998887

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.8e-09  Score=53.29  Aligned_cols=39  Identities=18%  Similarity=0.342  Sum_probs=34.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESG-PSS   43 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC-CCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCC-CCC
Confidence            468899999999999999999999999999998887 443

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.4e-09  Score=54.16  Aligned_cols=39  Identities=23%  Similarity=0.473  Sum_probs=35.0

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKP-SGP   43 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSS-SCC
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCC
Confidence            468899999999999999999999999999998887 443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.7e-09  Score=53.28  Aligned_cols=39  Identities=13%  Similarity=0.327  Sum_probs=34.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSG-PSS   43 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCC-TTC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCC
Confidence            468899999999999999999999999999998887 443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.84  E-value=1.5e-09  Score=54.11  Aligned_cols=37  Identities=27%  Similarity=0.650  Sum_probs=34.1

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|++++||.|..|++.|.....|..|++.|.+.++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emj_A            4 GSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKP   40 (46)
T ss_dssp             CCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCS
T ss_pred             CCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            3468999999999999999999999999999998887

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.5e-09  Score=53.18  Aligned_cols=40  Identities=23%  Similarity=0.583  Sum_probs=35.4

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ...|++++||.|..|++.|.....|..|++.|.+.++ |.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKP-SGP   43 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCC-CCS
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCC-CCC
Confidence            3468999999999999999999999999999998887 444

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.7e-09  Score=53.90  Aligned_cols=36  Identities=17%  Similarity=0.411  Sum_probs=33.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccC-CCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG-QEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~-~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.+ .++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKS   41 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTT
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCC
Confidence            468899999999999999999999999999998 777

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.1e-09  Score=54.63  Aligned_cols=36  Identities=28%  Similarity=0.592  Sum_probs=33.7

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKP   40 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSC
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            468999999999999999999999999999998887

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.83  E-value=5e-10  Score=59.68  Aligned_cols=50  Identities=18%  Similarity=0.422  Sum_probs=41.2

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHH
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGL   83 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l   83 (143)
                      ...|++++||.|+.|++.|.....|.   ..|.+.++                    |.|++|++.|.....+
T Consensus         6 ~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~--------------------~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            6 ERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGT--------------------FRCTFCHTEVEEDESA   55 (62)
T ss_dssp             SSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTE--------------------EBCSSSCCBCEECTTC
T ss_pred             HHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCC--------------------EECCCCCCccccCccc
Confidence            34689999999999999999988876   56666655                    9999999999876543

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.3e-09  Score=53.79  Aligned_cols=39  Identities=15%  Similarity=0.335  Sum_probs=34.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2yu5_A            5 SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG-PSS   43 (44)
T ss_dssp             CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCS-SCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCC-CCC
Confidence            468999999999999999999999999999998887 443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.9e-09  Score=53.67  Aligned_cols=39  Identities=26%  Similarity=0.591  Sum_probs=34.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|+++++|.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2yrj_A            5 SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKP-SGP   43 (46)
T ss_dssp             CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCS-SCS
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC-CCC
Confidence            468899999999999999999999999999998887 443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.4e-09  Score=53.54  Aligned_cols=39  Identities=18%  Similarity=0.406  Sum_probs=34.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|+++++|.|..|++.|.....|..|+..|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG-PSS   43 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSC-SCC
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCC-CCC
Confidence            468999999999999999999999999999998887 443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.4e-09  Score=54.21  Aligned_cols=40  Identities=20%  Similarity=0.454  Sum_probs=35.5

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ...|.+++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKS-SGP   43 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTC-CCS
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCC
Confidence            3568999999999999999999999999999998887 444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.4e-09  Score=54.17  Aligned_cols=36  Identities=31%  Similarity=0.660  Sum_probs=33.7

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKP   40 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            468999999999999999999999999999998887

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.3e-09  Score=54.27  Aligned_cols=39  Identities=21%  Similarity=0.539  Sum_probs=35.0

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2eow_A            5 SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKP-SGP   43 (46)
T ss_dssp             CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSC-SCT
T ss_pred             CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCC-CCC
Confidence            468999999999999999999999999999998887 443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.3e-09  Score=52.92  Aligned_cols=37  Identities=24%  Similarity=0.464  Sum_probs=34.1

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ...|++++||.|..|++.|.....|..|++.|.++++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG   40 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC
Confidence            3568999999999999999999999999999998887

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.2e-09  Score=53.84  Aligned_cols=39  Identities=21%  Similarity=0.536  Sum_probs=35.0

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.+.++ |.|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG-PSS   43 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCC-CSC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCC-CCC
Confidence            468899999999999999999999999999998887 443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.5e-09  Score=54.09  Aligned_cols=39  Identities=23%  Similarity=0.508  Sum_probs=34.8

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2yto_A            5 SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH-SGP   43 (46)
T ss_dssp             CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCB-TTT
T ss_pred             cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCC-CCC
Confidence            468899999999999999999999999999998887 443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.80  E-value=2.5e-09  Score=51.28  Aligned_cols=35  Identities=14%  Similarity=0.369  Sum_probs=23.2

Q ss_pred             cCCCccccCcccccccChHHHHhhhhhhcCCCCCee
Q psy12022         63 NHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQ   98 (143)
Q Consensus        63 ~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~   98 (143)
                      +++++|.|.+|++.|.....|..|+++|+++++ |.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~   36 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRA-RL   36 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCT-TT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcc-ce
Confidence            445567777777777777777777777766555 54

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.5e-09  Score=54.12  Aligned_cols=39  Identities=21%  Similarity=0.413  Sum_probs=35.0

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETL-SGP   43 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCS-SSC
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCC-CCC
Confidence            468999999999999999999999999999998887 444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.7e-09  Score=53.79  Aligned_cols=36  Identities=22%  Similarity=0.639  Sum_probs=33.6

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   40 (46)
T 2eor_A            5 SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKP   40 (46)
T ss_dssp             SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCC
T ss_pred             cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCC
Confidence            468899999999999999999999999999998887

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=2.2e-10  Score=65.47  Aligned_cols=38  Identities=11%  Similarity=0.236  Sum_probs=22.1

Q ss_pred             CCcccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         10 PGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        10 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ....|++++||.|..|++.|.....|..|++.|.++++
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp   53 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ   53 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC
Confidence            34445566666666666666666666666655555544

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.78  E-value=2.9e-09  Score=49.71  Aligned_cols=35  Identities=20%  Similarity=0.362  Sum_probs=31.5

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      .|++++||.|..|++.|.....|..|++.|.+..+
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            37889999999999999999999999999987653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.77  E-value=2.4e-09  Score=51.36  Aligned_cols=34  Identities=15%  Similarity=0.413  Sum_probs=31.3

Q ss_pred             cCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         14 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        14 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      |++++||.|..|++.|.....|..|++.|.++++
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence            5688999999999999999999999999998887

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.5e-09  Score=50.62  Aligned_cols=36  Identities=17%  Similarity=0.402  Sum_probs=32.5

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            468899999999999999999999999999987653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.4e-09  Score=50.68  Aligned_cols=33  Identities=21%  Similarity=0.351  Sum_probs=19.9

Q ss_pred             hhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         89 YDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        89 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      +|+++++ |.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            3 SGSSGRS-YSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCC-CEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCC-cCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            4555555 66666666666666666666665543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.76  E-value=4.8e-09  Score=56.52  Aligned_cols=38  Identities=13%  Similarity=0.180  Sum_probs=33.4

Q ss_pred             ccCCCCCCCCCc--cccccCChhHHhccc-ccccCCCCcccC
Q psy12022         13 KQNHAEMFACDV--CGKEYKQKYGLNRHK-KYDCGQEPKYHG   51 (143)
Q Consensus        13 ~~~~~~~~~C~~--C~~~f~~~~~l~~h~-~~h~~~~~~~~c   51 (143)
                      -.+++|||+|.+  |++.|.....|..|+ ++|.+++| +.|
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP-~~~   61 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP-AFS   61 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC-CCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC-ccc
Confidence            368899999976  999999999999998 68999998 554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4e-09  Score=49.58  Aligned_cols=34  Identities=15%  Similarity=0.504  Sum_probs=31.2

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            4688999999999999999999999999998765

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.7e-09  Score=53.84  Aligned_cols=39  Identities=18%  Similarity=0.380  Sum_probs=35.0

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      ..|++++||.|..|++.|.....|..|++.|.++++ |.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C   43 (46)
T 2en3_A            5 SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP-SGP   43 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCC-SSC
T ss_pred             cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCC-CCC
Confidence            468899999999999999999999999999998887 444

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.74  E-value=7.6e-09  Score=48.15  Aligned_cols=32  Identities=25%  Similarity=0.485  Sum_probs=18.7

Q ss_pred             hcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         90 DCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        90 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      |+++++ |.|.+|++.|.....|..|+++|+++
T Consensus         2 h~~~k~-~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSG-YVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCS-EECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCC-eECCCCcchhCCHHHHHHHHHHHcCC
Confidence            344444 66666666666666666666665543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.74  E-value=3.3e-09  Score=49.44  Aligned_cols=33  Identities=18%  Similarity=0.399  Sum_probs=30.6

Q ss_pred             cCCCCCCCCCccccccCChhHHhcccccccCCC
Q psy12022         14 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQE   46 (143)
Q Consensus        14 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   46 (143)
                      |++++||.|..|++.|.....|..|++.|.+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            788999999999999999999999999988765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.6e-09  Score=51.17  Aligned_cols=33  Identities=21%  Similarity=0.402  Sum_probs=30.4

Q ss_pred             ccCCCCCCCCCc--cccccCChhHHhcccccccCC
Q psy12022         13 KQNHAEMFACDV--CGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        13 ~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      ++++++||+|..  |++.|..+..|..|+++|.+.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            578999999987  999999999999999999875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.72  E-value=1e-08  Score=47.80  Aligned_cols=31  Identities=23%  Similarity=0.517  Sum_probs=17.2

Q ss_pred             hcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         90 DCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        90 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |+++++ |.|.+|++.|.....|..|+++|++
T Consensus         2 H~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            2 SSGKRP-FVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSC-EECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCcC-eeCCCCCcccCCHHHHHHHHHHcCC
Confidence            344444 6666666666666666666555544

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=1.4e-08  Score=54.71  Aligned_cols=42  Identities=12%  Similarity=0.106  Sum_probs=35.8

Q ss_pred             cccCCCccccCc--ccccccChHHHHhhh-hhhcCCCCCeeccCCc
Q psy12022         61 KQNHAEMFACDV--CGKEYKQKYGLNRHK-KYDCGQEPKYQCLYCP  103 (143)
Q Consensus        61 ~~~~~~~~~C~~--C~~~~~~~~~l~~h~-~~h~~~~~~~~C~~C~  103 (143)
                      ..++++||.|..  |++.|.....|..|+ ++|++++| |.|..-+
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP-~~~~~~~   65 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP-AFSAEVE   65 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC-CCCCSCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC-ccccccc
Confidence            467889999975  999999999999997 68999888 8887533

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.70  E-value=1.1e-08  Score=48.23  Aligned_cols=33  Identities=18%  Similarity=0.356  Sum_probs=30.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   44 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~   44 (143)
                      ..|++++||+|..|++.|.....|..|++.|.+
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            468899999999999999999999999998875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=6.6e-09  Score=48.81  Aligned_cols=34  Identities=18%  Similarity=0.392  Sum_probs=31.1

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      ..|.+++||+|..|++.|.....|..|++.|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            4688999999999999999999999999988765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.66  E-value=2.3e-08  Score=46.10  Aligned_cols=30  Identities=23%  Similarity=0.340  Sum_probs=22.5

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCCCe
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKY   97 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~   97 (143)
                      ||.|++|++.|.....|..|+++|+++++ |
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGE-E   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCC-C
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCC-C
Confidence            57777777777777777777777777665 5

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=7.5e-09  Score=49.02  Aligned_cols=33  Identities=24%  Similarity=0.410  Sum_probs=23.2

Q ss_pred             hhhcCCCCCeeccCCcccccChHHHHhH-Hhhhcc
Q psy12022         88 KYDCGQEPKYQCLYCPYRAKLRFNLKTH-INVKHS  121 (143)
Q Consensus        88 ~~h~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~  121 (143)
                      ++|++++| |.|.+|++.|.....|..| +++|.+
T Consensus         2 ~~H~~~k~-~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHL-YYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCE-EECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcC-eECCCCCcccCCHHHHHHHHHHHccC
Confidence            35666666 7888888888777777777 666543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=7.8e-09  Score=48.46  Aligned_cols=34  Identities=21%  Similarity=0.382  Sum_probs=30.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      ..|.+++||.|..|++.|.....|..|++.|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3588999999999999999999999999988765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.4e-08  Score=47.54  Aligned_cols=34  Identities=29%  Similarity=0.586  Sum_probs=30.9

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      ..|.++++|.|..|++.|.....|..|++.|.++
T Consensus         2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            3578899999999999999999999999988765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.4e-08  Score=48.56  Aligned_cols=30  Identities=20%  Similarity=0.521  Sum_probs=18.3

Q ss_pred             cCCCCCeeccC--CcccccChHHHHhHHhhhcc
Q psy12022         91 CGQEPKYQCLY--CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        91 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  121 (143)
                      ++++| |+|.+  |++.|...+.|..|+++|++
T Consensus         5 ~gekp-~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGIL-LKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCC-EECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCC-CCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            34445 66664  66666666666666666654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=6.1e-09  Score=49.24  Aligned_cols=34  Identities=18%  Similarity=0.305  Sum_probs=30.9

Q ss_pred             cccCCCCCCCCCccccccCCh-hHHhcccccccCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQK-YGLNRHKKYDCGQ   45 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~-~~l~~h~~~h~~~   45 (143)
                      ..|++++||.|..|++.|... ..|..|++.|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            468899999999999999999 9999999988764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.4e-08  Score=47.66  Aligned_cols=33  Identities=27%  Similarity=0.636  Sum_probs=22.4

Q ss_pred             hhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         89 YDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        89 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      .|.++++ |.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKP-FKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCS-EECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCC-ccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3555555 77777777777777777777776543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.4e-08  Score=47.62  Aligned_cols=32  Identities=19%  Similarity=0.325  Sum_probs=22.5

Q ss_pred             hcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         90 DCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        90 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      |+++++ |.|.+|++.|.....|..|+++|.++
T Consensus         4 h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLL-YDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCC-EECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCC-eECCCCCCccCCHHHHHHHHHHhcCC
Confidence            455555 77777777777777777777776543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.64  E-value=1.8e-08  Score=50.65  Aligned_cols=35  Identities=29%  Similarity=0.326  Sum_probs=23.5

Q ss_pred             hcCCCCCeeccCCcccccChHHHHhHHh-hhccHHHH
Q psy12022         90 DCGQEPKYQCLYCPYRAKLRFNLKTHIN-VKHSYEYI  125 (143)
Q Consensus        90 h~~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~  125 (143)
                      |+++++ |.|.+|++.|.....|..|++ +|.++...
T Consensus         2 Ht~~kp-~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            2 EDRDKP-YACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             CTTTSC-EECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCcC-EECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            556666 888888888888888888877 76665544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.1e-08  Score=48.29  Aligned_cols=32  Identities=19%  Similarity=0.396  Sum_probs=21.3

Q ss_pred             hhcCCCCCeeccCCcccccCh-HHHHhHHhhhcc
Q psy12022         89 YDCGQEPKYQCLYCPYRAKLR-FNLKTHINVKHS  121 (143)
Q Consensus        89 ~h~~~~~~~~C~~C~~~f~~~-~~l~~H~~~~~~  121 (143)
                      +|.++++ |.|.+|++.|... ..|..|+++|.+
T Consensus         3 ~h~~~k~-~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            3 SGSSGRA-MKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             SCCCCCC-EECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCC-eECCCCChhhccCHHHHHHHHHhcCC
Confidence            4555555 7777777777776 777777776654

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=4e-09  Score=58.37  Aligned_cols=59  Identities=22%  Similarity=0.412  Sum_probs=51.6

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhhc
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~   91 (143)
                      ..+.+++|+.|..|++.|. ...|..|+ .++++.+                    +.|+.|++.|.. ..|..|++++.
T Consensus        10 ~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~--------------------~~C~~C~~~~~~-~~l~~H~~~c~   66 (75)
T 2d9k_A           10 ETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGART--------------------ELCGNCGRNVLV-KDLKTHPEVCG   66 (75)
T ss_dssp             CCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCE--------------------EECSSSCCEEET-TGGGTHHHHBT
T ss_pred             cccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCc--------------------eEcccCCCcCcH-HHHHHHHHHcc
Confidence            3578899999999999995 89999999 8888887                    999999998774 78999999987


Q ss_pred             CC
Q psy12022         92 GQ   93 (143)
Q Consensus        92 ~~   93 (143)
                      ++
T Consensus        67 ~~   68 (75)
T 2d9k_A           67 RE   68 (75)
T ss_dssp             TB
T ss_pred             CC
Confidence            74

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1.9e-08  Score=47.10  Aligned_cols=31  Identities=26%  Similarity=0.698  Sum_probs=19.8

Q ss_pred             hcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         90 DCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        90 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.++++ |.|.+|++.|.....|..|+++|.+
T Consensus         4 h~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKP-YKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCS-EECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCC-CCCCCCCcccCCHHHHHHHHHHccC
Confidence            445455 6677777766666666666666654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.61  E-value=2.4e-09  Score=61.08  Aligned_cols=56  Identities=11%  Similarity=0.147  Sum_probs=43.6

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      .|+++++|.|++|++.|.....|..|+++|+++++ |.|..|...    ..|..|.++|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~~~~~----~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ-KRAKRQERR----KQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHH-HHCCCCSCC----CCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC-cccchhhhH----HHHHhhhccccc
Confidence            56777789999999999999999999999998777 999877643    334455555443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=1.2e-08  Score=48.33  Aligned_cols=34  Identities=18%  Similarity=0.324  Sum_probs=30.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcc-cccccCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRH-KKYDCGQ   45 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h-~~~h~~~   45 (143)
                      ..|++++||+|+.|++.|.....|..| +..|.+.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            358899999999999999999999999 8888653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=6.6e-08  Score=45.14  Aligned_cols=24  Identities=25%  Similarity=0.314  Sum_probs=12.4

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |.|.+|++.|.....|..|+++|.
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A           10 HLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             eecCcCCCCcCchHHHHHHHHHhc
Confidence            555555555555555555555444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.57  E-value=1.6e-08  Score=50.86  Aligned_cols=35  Identities=34%  Similarity=0.735  Sum_probs=29.8

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccc-cccCCCC
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKK-YDCGQEP   47 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~   47 (143)
                      .|++++||.|..|++.|.....|..|++ .|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3789999999999999999999999999 9988765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.54  E-value=5e-08  Score=46.21  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=15.8

Q ss_pred             CCCccccC--cccccccChHHHHhhhhhhcCCCC
Q psy12022         64 HAEMFACD--VCGKEYKQKYGLNRHKKYDCGQEP   95 (143)
Q Consensus        64 ~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~~~   95 (143)
                      ++++|.|.  .|++.|.....|..|+++|+++++
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            34445555  355555555555555555554433

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=5e-08  Score=45.64  Aligned_cols=31  Identities=19%  Similarity=0.562  Sum_probs=20.1

Q ss_pred             hcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         90 DCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        90 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      +.++++ |.|.+|++.|.....|..|+++|.+
T Consensus         4 ~~~~k~-~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSSGKI-FTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSCCCC-EECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCC-EECCCCCceeCCHHHHHHHHHHhCC
Confidence            344445 7777777777777777777766654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=2.6e-08  Score=46.64  Aligned_cols=33  Identities=24%  Similarity=0.576  Sum_probs=30.2

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCC
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      .|.+++||.|..|++.|.....|..|++.|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            578899999999999999999999999988765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.52  E-value=4.1e-08  Score=45.19  Aligned_cols=30  Identities=23%  Similarity=0.340  Sum_probs=28.2

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      +||.|..|++.|.....|..|+.+|.++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            589999999999999999999999998876

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.51  E-value=3.7e-08  Score=46.49  Aligned_cols=27  Identities=22%  Similarity=0.449  Sum_probs=25.2

Q ss_pred             ccCCCCCCCCCccccccCChhHHhccc
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHK   39 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~   39 (143)
                      .+.+|+||+|..|++.|.+.+.|..|+
T Consensus         2 ~~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            2 SLLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CSSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCCccCeECCCCCCccCCHhHccCcC
Confidence            367899999999999999999999998

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.50  E-value=2.7e-08  Score=45.49  Aligned_cols=30  Identities=27%  Similarity=0.418  Sum_probs=28.0

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      +||.|..|++.|.....|..|++.|.++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            589999999999999999999999998876

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.44  E-value=5.6e-08  Score=45.84  Aligned_cols=24  Identities=25%  Similarity=0.567  Sum_probs=12.6

Q ss_pred             CCCccccCcccccccChHHHHhhh
Q psy12022         64 HAEMFACDVCGKEYKQKYGLNRHK   87 (143)
Q Consensus        64 ~~~~~~C~~C~~~~~~~~~l~~h~   87 (143)
                      +++||.|.+|+++|...+.|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            444555555555555555555554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.43  E-value=2.9e-07  Score=49.47  Aligned_cols=42  Identities=21%  Similarity=0.394  Sum_probs=32.3

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcc
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPY  104 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~  104 (143)
                      .+.+++||.|.+|++.|.....|..|+++|+++.  ..+.+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~--~~~~~~~~   48 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS--LQLGYIDL   48 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS--CCCCSCCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc--cccccccC
Confidence            3567788999999999999989999999888743  45555553

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.43  E-value=1.2e-07  Score=51.02  Aligned_cols=36  Identities=19%  Similarity=0.414  Sum_probs=32.4

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      ..+.+++||+|..|++.|.....|..|+++|.+...
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            347889999999999999999999999999998653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.42  E-value=8.7e-08  Score=45.34  Aligned_cols=33  Identities=18%  Similarity=0.237  Sum_probs=28.6

Q ss_pred             hcCCCCCeecc--CCcccccChHHHHhHHhhhccHH
Q psy12022         90 DCGQEPKYQCL--YCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        90 h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      |+++++ |.|.  .|++.|...+.|..|+++|.+++
T Consensus         1 H~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            1 MSDDKP-FLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CTTCCC-EECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCCCcc-eECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            456677 9999  59999999999999999988764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.41  E-value=2.1e-07  Score=40.77  Aligned_cols=24  Identities=33%  Similarity=0.690  Sum_probs=19.2

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |.|.+|++.|.....|..|+++|+
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            4 YSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             EECSSSCCEESCHHHHHHHHTTSC
T ss_pred             ccCCCCCcccCCHHHHHHHHHhcC
Confidence            888888888888888888887765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.40  E-value=2.3e-07  Score=40.28  Aligned_cols=25  Identities=24%  Similarity=0.691  Sum_probs=19.5

Q ss_pred             CCCeeccCCcccccChHHHHhHHhhh
Q psy12022         94 EPKYQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      ++ |.|.+|++.|.....|..|+++|
T Consensus         2 k~-~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KP-FSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CC-EECSSSSCEESSHHHHHHHHHHC
T ss_pred             cC-ccCCCcChhhCCHHHHHHHHHHc
Confidence            44 88888888888888888887765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.40  E-value=1.4e-07  Score=44.41  Aligned_cols=31  Identities=13%  Similarity=0.180  Sum_probs=18.5

Q ss_pred             hcCCCCCeeccC--CcccccChHHHHhHHhhhcc
Q psy12022         90 DCGQEPKYQCLY--CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        90 h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |+++++ |.|.+  |++.|...+.|..|+++|.+
T Consensus         3 ~~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQ-HICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCC-EECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCC-CCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            344444 66663  66666666666666666554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.39  E-value=1.9e-07  Score=40.68  Aligned_cols=25  Identities=20%  Similarity=0.517  Sum_probs=20.1

Q ss_pred             CCCeeccCCcccccChHHHHhHHhhh
Q psy12022         94 EPKYQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      +| |.|.+|++.|...+.|..|+++|
T Consensus         2 k~-~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 AP-YRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CT-EEETTTTEEESCHHHHHHHHTTC
T ss_pred             cC-cCCCCCCcccCCHHHHHHHHHhc
Confidence            45 88888888888888888888775

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=1.7e-07  Score=41.56  Aligned_cols=25  Identities=24%  Similarity=0.452  Sum_probs=17.6

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.+|++.|.....|..|+++|++
T Consensus         4 ~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            4 YQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             EECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             ccCCCCCcccCCHHHHHHHHHHhcc
Confidence            7777777777777777777776654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.39  E-value=2e-07  Score=40.41  Aligned_cols=25  Identities=24%  Similarity=0.428  Sum_probs=17.4

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.+|++.|.....|..|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            6677777777777777777776654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.39  E-value=2.3e-07  Score=43.65  Aligned_cols=33  Identities=24%  Similarity=0.564  Sum_probs=29.3

Q ss_pred             cccCCCccccC--cccccccChHHHHhhhhhhcCC
Q psy12022         61 KQNHAEMFACD--VCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        61 ~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      .++++++|.|.  .|++.|.....|..|+++|+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            36778889998  4999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=1e-07  Score=42.31  Aligned_cols=29  Identities=21%  Similarity=0.503  Sum_probs=26.5

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCC
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      ++||.|..|++.|.....|..|++.|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            47899999999999999999999988765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.38  E-value=2.1e-08  Score=45.86  Aligned_cols=29  Identities=28%  Similarity=0.463  Sum_probs=19.1

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCC
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEP   95 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~   95 (143)
                      ||.|.+|++.|.....|..|+++|+++++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            46666677766666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.37  E-value=1.2e-07  Score=41.61  Aligned_cols=28  Identities=29%  Similarity=0.711  Sum_probs=25.3

Q ss_pred             CCCCCCCccccccCChhHHhcccccccC
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCG   44 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~   44 (143)
                      ++||.|..|++.|.....|..|++.|.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999988753

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.37  E-value=3.5e-07  Score=40.46  Aligned_cols=25  Identities=60%  Similarity=1.044  Sum_probs=12.6

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.+|++.|.....|..|+++|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHcc
Confidence            4555555555555555555554443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=8.9e-08  Score=41.80  Aligned_cols=27  Identities=15%  Similarity=0.351  Sum_probs=24.5

Q ss_pred             CCCCCCCccccccCChhHHhccccccc
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDC   43 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~   43 (143)
                      ++||.|..|++.|.....|..|++.|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999998763

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.35  E-value=4.2e-07  Score=39.94  Aligned_cols=25  Identities=20%  Similarity=0.362  Sum_probs=14.1

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.+|++.|.....|..|+++|++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcC
Confidence            5555555555555555555555543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.35  E-value=2.3e-07  Score=40.86  Aligned_cols=25  Identities=28%  Similarity=0.497  Sum_probs=17.3

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.+|++.|.....|..|+++|.+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhcC
Confidence            6777777777777777777766654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.34  E-value=3e-07  Score=40.49  Aligned_cols=28  Identities=25%  Similarity=0.384  Sum_probs=25.7

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCC
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4689999999999999999999999875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.34  E-value=2.9e-07  Score=41.66  Aligned_cols=29  Identities=31%  Similarity=0.579  Sum_probs=26.6

Q ss_pred             CCCCCCC--ccccccCChhHHhcccccccCC
Q psy12022         17 AEMFACD--VCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        17 ~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      ++||.|.  .|++.|.....|..|+++|.++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4799999  8999999999999999999865

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.33  E-value=8.9e-08  Score=47.76  Aligned_cols=36  Identities=22%  Similarity=0.471  Sum_probs=25.9

Q ss_pred             hhhhhcCCCCCeecc--CCcccccChHHHHhHHhhhccH
Q psy12022         86 HKKYDCGQEPKYQCL--YCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        86 h~~~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      +...|+++++ |.|.  .|++.|...+.|..|+++|.++
T Consensus         9 ~~~~H~~~k~-~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            9 KYVKEMPDKT-FECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GSCEEETTTE-EECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHhccCCCCC-eECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3445777666 8885  5888888888888888877654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.33  E-value=1.1e-07  Score=41.38  Aligned_cols=27  Identities=15%  Similarity=0.477  Sum_probs=24.4

Q ss_pred             CCCCCCCccccccCChhHHhccccccc
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDC   43 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~   43 (143)
                      ++||.|..|++.|.....|..|++.|.
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            579999999999999999999998763

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.33  E-value=2.7e-07  Score=40.63  Aligned_cols=28  Identities=25%  Similarity=0.674  Sum_probs=25.7

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCC
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      ++|.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4799999999999999999999999874

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.32  E-value=4.2e-07  Score=39.87  Aligned_cols=24  Identities=25%  Similarity=0.419  Sum_probs=12.5

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |.|.+|++.|.....|..|+++|+
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            3 HKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhc
Confidence            555555555555555555555444

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.30  E-value=3.8e-07  Score=40.05  Aligned_cols=25  Identities=24%  Similarity=0.432  Sum_probs=15.2

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.+|++.|.....|..|+++|.+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             ccCCCCCCccCChhHHHHHHHHhcC
Confidence            6666666666666666666665543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.62  E-value=9e-08  Score=42.60  Aligned_cols=29  Identities=21%  Similarity=0.567  Sum_probs=26.2

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCC
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      ++||.|..|++.|.....|..|++.|.++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            46899999999999999999999988764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.28  E-value=3.2e-07  Score=40.60  Aligned_cols=29  Identities=21%  Similarity=0.418  Sum_probs=26.2

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCC
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQE   46 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   46 (143)
                      +||.|..|++.|.....|..|++.|.+..
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            47999999999999999999999887754

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.28  E-value=5e-07  Score=40.54  Aligned_cols=28  Identities=36%  Similarity=0.800  Sum_probs=25.7

Q ss_pred             CCCCCC--ccccccCChhHHhcccccccCC
Q psy12022         18 EMFACD--VCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        18 ~~~~C~--~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      +||.|.  .|++.|.....|..|++.|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            589998  9999999999999999999875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.27  E-value=3.7e-07  Score=40.10  Aligned_cols=28  Identities=29%  Similarity=0.674  Sum_probs=25.8

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCC
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      ++|.|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4789999999999999999999999875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.59  E-value=1.1e-07  Score=42.08  Aligned_cols=28  Identities=29%  Similarity=0.589  Sum_probs=25.5

Q ss_pred             CCCCCCccccccCChhHHhcccccccCC
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      +||.|..|++.|.....|..|++.|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5899999999999999999999988764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=3e-07  Score=40.35  Aligned_cols=28  Identities=25%  Similarity=0.455  Sum_probs=25.9

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCC
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      ++|.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4799999999999999999999999875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.26  E-value=5.1e-07  Score=39.02  Aligned_cols=26  Identities=23%  Similarity=0.680  Sum_probs=23.5

Q ss_pred             CCCCCccccccCChhHHhcccccccC
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKYDCG   44 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~h~~   44 (143)
                      ||.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            68999999999999999999998875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.26  E-value=7.5e-07  Score=39.94  Aligned_cols=25  Identities=24%  Similarity=0.489  Sum_probs=13.3

Q ss_pred             eecc--CCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCL--YCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~--~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.  .|++.|...+.|..|+++|.+
T Consensus         3 ~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            3 FMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             cCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            5554  555555555555555555443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.57  E-value=1.2e-07  Score=42.14  Aligned_cols=26  Identities=19%  Similarity=0.413  Sum_probs=17.5

Q ss_pred             eeccCCcccccChHHHHhHHhhhccH
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      |.|..|++.|.....|..|+++|+++
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            4 YVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            66777777777777777776666543

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.25  E-value=1.1e-06  Score=39.67  Aligned_cols=25  Identities=20%  Similarity=0.311  Sum_probs=14.0

Q ss_pred             eecc--CCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCL--YCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~--~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.  .|++.|.....|..|+++|.+
T Consensus         4 ~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            4 YSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             BCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            5555  555555555555555555543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.24  E-value=6.7e-07  Score=39.63  Aligned_cols=28  Identities=29%  Similarity=0.737  Sum_probs=25.2

Q ss_pred             CCCCCCccccccCChhHHhcc-cccccCC
Q psy12022         18 EMFACDVCGKEYKQKYGLNRH-KKYDCGQ   45 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h-~~~h~~~   45 (143)
                      +||.|..|++.|.....|..| +..|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            489999999999999999999 7888764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.54  E-value=1.5e-07  Score=41.63  Aligned_cols=26  Identities=19%  Similarity=0.317  Sum_probs=17.3

Q ss_pred             eeccCCcccccChHHHHhHHhhhccH
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      |.|.+|++.|.....|..|+++|+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            66777777776666677776666543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=1.7e-07  Score=40.33  Aligned_cols=25  Identities=28%  Similarity=0.667  Sum_probs=23.2

Q ss_pred             CCCCCCccccccCChhHHhcccccc
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYD   42 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h   42 (143)
                      +||.|..|++.|.....|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            5899999999999999999999876

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.16  E-value=1.3e-06  Score=38.60  Aligned_cols=24  Identities=25%  Similarity=0.359  Sum_probs=12.8

Q ss_pred             eeccCCcccccChHHHHhH-Hhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTH-INVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H-~~~~~  120 (143)
                      |.|..|++.|.....|..| +++|.
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             cCCcccCcccCChHHHHHHHHHHcc
Confidence            5555555555555555555 34443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=6.7e-07  Score=44.47  Aligned_cols=33  Identities=24%  Similarity=0.533  Sum_probs=28.9

Q ss_pred             cccCCCccccC--cccccccChHHHHhhhhhhcCC
Q psy12022         61 KQNHAEMFACD--VCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        61 ~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      .|+++++|.|.  .|++.|.....|..|+++|+++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            46667779995  7999999999999999999875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.42  E-value=3.1e-07  Score=39.49  Aligned_cols=23  Identities=30%  Similarity=0.447  Sum_probs=16.8

Q ss_pred             eeccCCcccccChHHHHhHHhhh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      |.|.+|++.|.....|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            77777777777777777777665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.05  E-value=3.7e-06  Score=36.68  Aligned_cols=24  Identities=25%  Similarity=0.444  Sum_probs=19.0

Q ss_pred             eecc--CCcccccChHHHHhHHhhhc
Q psy12022         97 YQCL--YCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~--~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |.|.  .|++.|...+.|..|+++|.
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            7788  88888888888888887765

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.89  E-value=6.4e-06  Score=35.89  Aligned_cols=27  Identities=37%  Similarity=0.898  Sum_probs=24.2

Q ss_pred             CccccC--cccccccChHHHHhhhhhhcC
Q psy12022         66 EMFACD--VCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        66 ~~~~C~--~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            368999  999999999999999999864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.76  E-value=7.5e-05  Score=39.62  Aligned_cols=51  Identities=22%  Similarity=0.401  Sum_probs=42.4

Q ss_pred             cCcccccccChHHHHhhhh-hhcCCC-----CCeecc--CCcccccChHHHHhHHhhhc
Q psy12022         70 CDVCGKEYKQKYGLNRHKK-YDCGQE-----PKYQCL--YCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        70 C~~C~~~~~~~~~l~~h~~-~h~~~~-----~~~~C~--~C~~~f~~~~~l~~H~~~~~  120 (143)
                      ...|++.|.+...|..|+. .|.+.+     ++|.|.  .|++.+.....|..|+++.|
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            3569999999999999984 687654     249998  69999988899999998765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.36  E-value=8.9e-05  Score=44.42  Aligned_cols=30  Identities=33%  Similarity=0.286  Sum_probs=18.3

Q ss_pred             hhcCCCCCeeccCCcccccChHHHHhHHhhh
Q psy12022         89 YDCGQEPKYQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        89 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      .++|+.+ |.|..|++.|.....|..|++..
T Consensus        44 d~tGekp-fyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGL-HRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGC-SEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcc-eEcccCcchhCCHHHHHHHHhhh
Confidence            3555555 66666666666666666666543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.28  E-value=0.00035  Score=36.96  Aligned_cols=56  Identities=20%  Similarity=0.291  Sum_probs=42.5

Q ss_pred             CCCccccccCChhHHhccc-ccccCCCCcccCCCCCCCccccccCCCccccC--cccccccChHHHHhhhhhh
Q psy12022         21 ACDVCGKEYKQKYGLNRHK-KYDCGQEPKYHGEDFSSWPGEKQNHAEMFACD--VCGKEYKQKYGLNRHKKYD   90 (143)
Q Consensus        21 ~C~~C~~~f~~~~~l~~h~-~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~h   90 (143)
                      ++..|++.|.+...|..|+ ..|.+...              .....+|.|.  .|++.+.....|..|++..
T Consensus         5 ~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~--------------~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            5 KWKECPESASSLFDLQRHLLKDHVSQDF--------------KHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCTTCCCCCSSHHHHHHHHHHHSCCCCC--------------CCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eeCCCCCcCCCHHHHHHHHHhhccCccc--------------CCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4556999999999999998 57877652              0011247785  8999888888999999865

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.23  E-value=7.6e-05  Score=44.72  Aligned_cols=33  Identities=12%  Similarity=0.259  Sum_probs=29.2

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhccccccc
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDC   43 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~   43 (143)
                      ...|+|++||.|..|++.|.+...|..|+++..
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~   74 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSKD   74 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCHH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhhh
Confidence            457899999999999999999999999986543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.21  E-value=0.0031  Score=30.78  Aligned_cols=21  Identities=19%  Similarity=0.373  Sum_probs=15.9

Q ss_pred             eeccCCcccccChHHHHhHHh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHIN  117 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~  117 (143)
                      |.|+.|+..|+....|+.|+.
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            777777777777777777776

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.09  E-value=0.0092  Score=35.93  Aligned_cols=52  Identities=15%  Similarity=0.236  Sum_probs=40.0

Q ss_pred             CccccCcccccccChHHHHhhh--hhhc------------------------------CCCCCeeccCCcccccChHHHH
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHK--KYDC------------------------------GQEPKYQCLYCPYRAKLRFNLK  113 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~--~~h~------------------------------~~~~~~~C~~C~~~f~~~~~l~  113 (143)
                      +++.|..|...|.+...+..|.  +.|.                              .....|-|..|+..|.....|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            4588999999999888888887  2220                              0122378999999999999999


Q ss_pred             hHHh
Q psy12022        114 THIN  117 (143)
Q Consensus       114 ~H~~  117 (143)
                      .|..
T Consensus       111 ~H~~  114 (127)
T 1zu1_A          111 SHYI  114 (127)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            9876

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.34  E-value=0.029  Score=33.74  Aligned_cols=71  Identities=15%  Similarity=0.285  Sum_probs=47.5

Q ss_pred             CCCCCCccccccCChhHHhccc--ccccCCCCcccC----------CCCCCCcc-ccccCCCccccCcccccccChHHHH
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHK--KYDCGQEPKYHG----------EDFSSWPG-EKQNHAEMFACDVCGKEYKQKYGLN   84 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~--~~h~~~~~~~~c----------~~f~~~~~-~~~~~~~~~~C~~C~~~~~~~~~l~   84 (143)
                      +++.|..|+..|.+...+..|.  +.|......+.+          ..+..... ........+-|..|+..|.+...+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            5788999999999999999997  344321000110          11111111 1344566789999999999999999


Q ss_pred             hhhh
Q psy12022         85 RHKK   88 (143)
Q Consensus        85 ~h~~   88 (143)
                      .|..
T Consensus       111 ~H~~  114 (127)
T 1zu1_A          111 SHYI  114 (127)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            9875

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.15  E-value=0.026  Score=27.52  Aligned_cols=29  Identities=21%  Similarity=0.448  Sum_probs=24.8

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCCC
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQE   94 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~   94 (143)
                      .++.|+.|+..|.....|..||...-++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcch
Confidence            56899999999999999999999665543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.33  E-value=0.065  Score=33.64  Aligned_cols=55  Identities=18%  Similarity=0.376  Sum_probs=39.9

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      .+..|+.|+..+. ...+..|....-.... ..|..|+..+.. ..|..|..++.++.
T Consensus       109 ~~v~C~~C~~~~~-r~~l~~H~~~~C~~r~-~~C~~C~~~~~~-~~l~~H~~~~~~~~  163 (170)
T 3hcs_A          109 ALMDCPQCQRPFQ-KFHINIHILKDCPRRQ-VSCDNCAASMAF-EDKEIHDQNCPLAL  163 (170)
T ss_dssp             SEEECTTTCCEEE-GGGHHHHHHHTCTTCE-EECTTTCCEEEG-GGHHHHHTTCCC--
T ss_pred             eeeECCCCChHHH-HHHHHHHhhhhCCCCC-eECCCCCCccCH-HHHHhHHHhCcChh
Confidence            4567888988774 4568889875555555 889999988754 47899998877654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.86  E-value=0.09  Score=23.85  Aligned_cols=25  Identities=20%  Similarity=0.279  Sum_probs=18.2

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|+.|.+.|.....|..|....|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            7777777777777777777665553

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=92.10  E-value=0.099  Score=23.89  Aligned_cols=29  Identities=17%  Similarity=0.377  Sum_probs=24.0

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCC
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      ...+.|..|+-+|.....+..|.+..+..
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~YC~s   34 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFYCKN   34 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHTSCC
T ss_pred             cCcCeeccccceehhhHHHhhhheecCCC
Confidence            45688999999999999999998765543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=90.09  E-value=0.081  Score=33.20  Aligned_cols=28  Identities=14%  Similarity=0.156  Sum_probs=20.5

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCC
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEP   95 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~   95 (143)
                      ...|+.|+..+... .+..|...+.|+.+
T Consensus       137 ~~~C~~C~~~~~~~-~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          137 QVSCDNCAASMAFE-DKEIHDQNCPLALE  164 (170)
T ss_dssp             EEECTTTCCEEEGG-GHHHHHTTCCC---
T ss_pred             CeECCCCCCccCHH-HHHhHHHhCcChhh
Confidence            37899999887664 68899998888654

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.23  E-value=0.34  Score=26.26  Aligned_cols=30  Identities=20%  Similarity=0.272  Sum_probs=23.3

Q ss_pred             eeccCCccccc-------ChHHHHhHHhhhccHHHHH
Q psy12022         97 YQCLYCPYRAK-------LRFNLKTHINVKHSYEYIR  126 (143)
Q Consensus        97 ~~C~~C~~~f~-------~~~~l~~H~~~~~~~~~~~  126 (143)
                      -.|..|++.+.       .-+.|.+|++..|..++..
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~   65 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELEK   65 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCHHHHHh
Confidence            78999988776       2358999999999887543

>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6

Probab=88.19  E-value=0.42  Score=25.70  Aligned_cols=32  Identities=22%  Similarity=0.428  Sum_probs=24.5

Q ss_pred             eeccCCcccccC---hHHHHhHHhhhccHHHHHHH
Q psy12022         97 YQCLYCPYRAKL---RFNLKTHINVKHSYEYIRII  128 (143)
Q Consensus        97 ~~C~~C~~~f~~---~~~l~~H~~~~~~~~~~~~~  128 (143)
                      ..|..|...+.+   -++|.+|++.+|+.++....
T Consensus        30 a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~~~~   64 (73)
T 2ct5_A           30 IYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCEFV   64 (73)
T ss_dssp             CEETTTTEECCCCSSTHHHHHHHHHSCHHHHHHHC
T ss_pred             EECCCCCccccCCCChHhHHHHHHHHCHHHHHHHH
Confidence            678889876543   35899999999988877643

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=87.44  E-value=0.053  Score=29.60  Aligned_cols=43  Identities=19%  Similarity=0.291  Sum_probs=26.2

Q ss_pred             ccccCcccccccChHHHHhhhhhhcC--------------CCCCeeccCCcccccCh
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCG--------------QEPKYQCLYCPYRAKLR  109 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~--------------~~~~~~C~~C~~~f~~~  109 (143)
                      ..+||.||.......-+.+.+..-..              +.-.|+|+.||..|.-+
T Consensus         8 ~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A            8 MAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGK   64 (95)
T ss_dssp             CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEETT
T ss_pred             cccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhcc
Confidence            35899999988766544433221110              01138999999988543

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=87.40  E-value=0.47  Score=26.38  Aligned_cols=23  Identities=39%  Similarity=0.580  Sum_probs=14.5

Q ss_pred             eeccCCcccccChHHHHhHHhhhccH
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      ..|-+||+.|..   |.+|+..+|+-
T Consensus        22 iiClecGK~fK~---LkRHL~~~hgl   44 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSM   44 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCS
T ss_pred             eEecccchhhHH---HHHHHHHccCC
Confidence            567777776663   55777765553

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=86.83  E-value=0.18  Score=27.02  Aligned_cols=47  Identities=19%  Similarity=0.486  Sum_probs=29.8

Q ss_pred             ccc-CcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHh
Q psy12022         68 FAC-DVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHIN  117 (143)
Q Consensus        68 ~~C-~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~  117 (143)
                      ..| ..|+..+... .|..|+...-...+ ..|..|+..+.. ..|..|..
T Consensus        17 v~C~~~C~~~v~r~-~l~~H~~~~C~~r~-v~C~~C~~~~~~-~~l~~H~~   64 (76)
T 2yuc_A           17 IPCPNRCPMKLSRR-DLPAHLQHDCPKRR-LKCEFCGCDFSG-EAYESHEG   64 (76)
T ss_dssp             CBCTTCCSCBCCSS-SSTTTTTTSCTTSC-CCCSSSCCCCCH-HHHHHTTT
T ss_pred             cCCCccccHHhhHh-HHHhhCHhhCCCcc-eECCCCCCccCH-HHHHHHHh
Confidence            677 4687766553 56677663333344 788888887754 45677764

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=85.98  E-value=0.47  Score=30.86  Aligned_cols=28  Identities=18%  Similarity=0.188  Sum_probs=23.5

Q ss_pred             CeeccCCcccccC-hHHHHhHHhhhccHH
Q psy12022         96 KYQCLYCPYRAKL-RFNLKTHINVKHSYE  123 (143)
Q Consensus        96 ~~~C~~C~~~f~~-~~~l~~H~~~~~~~~  123 (143)
                      |.+|..|+..|.+ ...|+.|+..+-.+.
T Consensus       169 ~L~C~~C~~~f~n~~~~LK~HL~~e~~~~  197 (204)
T 3sp4_A          169 DLKCWRCGETFGRHFTKLKAHLQEEYDDW  197 (204)
T ss_dssp             CCBCTTTCCBCTTCHHHHHHHHHHHHHHH
T ss_pred             CceeCCCCchhhcccHHHHHHHHHHHHHH
Confidence            3999999999987 899999999865443

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=85.34  E-value=0.28  Score=26.70  Aligned_cols=47  Identities=23%  Similarity=0.456  Sum_probs=34.6

Q ss_pred             cccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHh
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHIN  117 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~  117 (143)
                      |.|..||.++.-+ .+..|.....+-.. |.|.-|+..|.. ..++.|-.
T Consensus        11 F~C~~Cgd~lKK~-kv~~H~~~Cr~~~~-~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A           11 FTCNACGESVKKI-QVEKHVSNCRNCEC-LSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             EEESSSCCEEETT-HHHHHHHHCTTCCE-EEETTTTEEEEG-GGTTTCCC
T ss_pred             EEcCCCCCeeecc-cchhHHhhCCCCCc-EEecccCCeeCC-CCEeCEee
Confidence            7899999877664 67788776644345 999999999975 45566643

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=81.06  E-value=0.53  Score=22.84  Aligned_cols=36  Identities=28%  Similarity=0.600  Sum_probs=20.4

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCCCCCeeccCCccc
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYR  105 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~  105 (143)
                      .|+|..||+.+.....-.  .....--.- +.|++|+..
T Consensus         4 ~y~C~vCGyvyd~~~Gd~--t~f~~lP~d-w~CP~Cg~~   39 (46)
T 6rxn_A            4 KYVCNVCGYEYDPAEHDN--VPFDQLPDD-WCCPVCGVS   39 (46)
T ss_dssp             CEEETTTCCEECGGGGTT--CCGGGSCTT-CBCTTTCCB
T ss_pred             EEECCCCCeEEeCCcCCC--cchhhCCCC-CcCcCCCCc
Confidence            489999998886432211  111111122 799999853

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=81.05  E-value=0.99  Score=26.00  Aligned_cols=29  Identities=24%  Similarity=0.473  Sum_probs=18.7

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccc
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRA  106 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f  106 (143)
                      .++.|..||+.|.          .- -.+| -.|+.|+...
T Consensus        66 ~p~~C~~CG~~F~----------~~-~~kP-srCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFK----------AE-INIP-SRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCC----------CC-SSCC-SSCSSSCCCC
T ss_pred             ECcChhhCcCeec----------cc-CCCC-CCCcCCCCCc
Confidence            4688999998881          01 1244 7888887543

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=80.43  E-value=0.83  Score=22.86  Aligned_cols=20  Identities=25%  Similarity=0.668  Sum_probs=15.2

Q ss_pred             eeccCCcccccChHHHHhHH
Q psy12022         97 YQCLYCPYRAKLRFNLKTHI  116 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~  116 (143)
                      -.|..|+..|...-.++.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            57888888887777777774

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=80.43  E-value=1.7  Score=18.61  Aligned_cols=21  Identities=29%  Similarity=0.545  Sum_probs=14.5

Q ss_pred             eeccCCcccccChHHHHhHHh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHIN  117 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~  117 (143)
                      +.|++|.........|+.|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            677777777666666666654

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=80.21  E-value=0.59  Score=30.34  Aligned_cols=26  Identities=27%  Similarity=0.631  Sum_probs=19.6

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCCCCCeeccCCccc
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYR  105 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~  105 (143)
                      ..|.|..||..+.             |..| ..|++|+..
T Consensus       170 ~~~~C~~CG~i~~-------------g~~p-~~CP~C~~~  195 (202)
T 1yuz_A          170 KFHLCPICGYIHK-------------GEDF-EKCPICFRP  195 (202)
T ss_dssp             CEEECSSSCCEEE-------------SSCC-SBCTTTCCB
T ss_pred             cEEEECCCCCEEc-------------CcCC-CCCCCCCCC
Confidence            4589999998865             1234 999999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	143
d1klra_	30	g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 96	0.001

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (73), Expect = 0.001
 Identities = 16/27 (59%), Positives = 18/27 (66%)

Query: 97  YQCLYCPYRAKLRFNLKTHINVKHSYE 123
           YQC YC +R+    NLKTHI  KHS E
Sbjct: 3   YQCQYCEFRSADSSNLKTHIKTKHSKE 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	143
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.71
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.62
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.3
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.3
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.29
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.29
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.27
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.27
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.26
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.21
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.2
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.19
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.16
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.11
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.11
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.06
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.05
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.04
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.02
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.01
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.99
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.91
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.88
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.84
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.75
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.75
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.72
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.71
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.69
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.64
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.63
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.59
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.58
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.58
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.53
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.43
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.42
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.4
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.39
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.36
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.28
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.23
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.06
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.04
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.03
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.01
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.99
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.93
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.91
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.88
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.84
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.84
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.8
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.72
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.71
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.69
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.69
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.67
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.64
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.61
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.39
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.36
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.29
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.27
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.26
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.24
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.16
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.13
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.1
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.08
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.04
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.03
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.01
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.99
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.86
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.8
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.76
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	96.72
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.66
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.66
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.64
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.62
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.49
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.45
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.45
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.3
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.29
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.18
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	96.06
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.92
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.86
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.61
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.1
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.06
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.41
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.7
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.44
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.23
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.01
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.81
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.21
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.78
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.23
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.14
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.75
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.57
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	87.23
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	85.94
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	82.3
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	82.05
d1fu9a_	36	U-shaped transcription factor, different fingers {	81.2
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	80.58
d2ct5a1	60	Zinc finger BED domain-containing protein 1 {Human	80.09

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=4.4e-18  Score=87.39  Aligned_cols=53  Identities=28%  Similarity=0.713  Sum_probs=50.2

Q ss_pred             CCccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcccccChHHHHhHHhhh
Q psy12022         65 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        65 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      ++||.| +||+.|.....|..|+++|+|++| |.|.+|++.|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekp-y~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccC-CcCCCcCCEecCHHHHHHHHhcC
Confidence            478999 599999999999999999999888 99999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=7e-17  Score=82.79  Aligned_cols=53  Identities=36%  Similarity=0.797  Sum_probs=50.1

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCCCCcccCCCCCCCccccccCCCccccCcccccccChHHHHhhhhhh
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYHGEDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYD   90 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~~c~~f~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h   90 (143)
                      ||||+| .||+.|.....|..|+++|.++++                    |.|.+||++|.....|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekp--------------------y~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP--------------------YGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCS--------------------EECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccC--------------------CcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 499999999999999999998887                    99999999999999999999876

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=7.7e-13  Score=59.94  Aligned_cols=32  Identities=25%  Similarity=0.440  Sum_probs=23.0

Q ss_pred             hhcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         89 YDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        89 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      +|+|++| |+|.+|++.|...+.|..|+++|.+
T Consensus         1 IHTgekp-y~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKP-YGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCC-EECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCC-eeCCCCCCEeCchHHhHhhccccCC
Confidence            3666666 7777777777777777777777765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2.5e-13  Score=63.98  Aligned_cols=37  Identities=16%  Similarity=0.203  Sum_probs=27.9

Q ss_pred             hhhhhhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         85 RHKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        85 ~h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      .|+++|++++| |.|.+||+.|...+.|..|+++|+++
T Consensus         2 rH~~~Ht~ekp-y~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRR-YKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCS-SBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCC-EecCCCCceeeCHHHHHHhCccCCCC
Confidence            36677777777 88888888888888888888877653

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=3.4e-13  Score=61.14  Aligned_cols=33  Identities=21%  Similarity=0.526  Sum_probs=31.2

Q ss_pred             ccCCCCCCCCCccccccCChhHHhcccccccCC
Q psy12022         13 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        13 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      .|++++||+|..||+.|...+.|..|+++|.++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            489999999999999999999999999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6e-13  Score=61.82  Aligned_cols=34  Identities=24%  Similarity=0.471  Sum_probs=27.1

Q ss_pred             hhhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         88 KYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        88 ~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      ++|+|++| |+|.+|++.|...+.|..|+++|+++
T Consensus         1 R~HTgekP-y~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKP-YACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCC-EECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCC-EECCCCCCCcCCHhHHHHhCcccCCC
Confidence            46778777 88888888888888888888887764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=9.4e-13  Score=61.56  Aligned_cols=35  Identities=20%  Similarity=0.279  Sum_probs=30.3

Q ss_pred             hhhhhcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         86 HKKYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        86 h~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.++|+|++| |+|.+|++.|...+.|..|+++|..
T Consensus         2 h~R~HTgeKP-y~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKP-FQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSS-BCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccC-eEeCCCCCEecCHHHHHHHHhcCcC
Confidence            6788999888 9999999999999999999988753

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.2e-12  Score=61.63  Aligned_cols=37  Identities=27%  Similarity=0.598  Sum_probs=32.7

Q ss_pred             CCCccccCcccccccChHHHHhhhh-hhcCCCCCeeccC
Q psy12022         64 HAEMFACDVCGKEYKQKYGLNRHKK-YDCGQEPKYQCLY  101 (143)
Q Consensus        64 ~~~~~~C~~C~~~~~~~~~l~~h~~-~h~~~~~~~~C~~  101 (143)
                      .++||+|.+||++|.....|..|++ +|+|++| |+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekp-y~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcC-cCCcC
Confidence            4678999999999999999999976 7999888 99974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.6e-12  Score=61.18  Aligned_cols=35  Identities=26%  Similarity=0.652  Sum_probs=32.7

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccCC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      ...|++++||+|+.||+.|...+.|..|+++|.++
T Consensus         4 ~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            45799999999999999999999999999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=1.5e-12  Score=60.42  Aligned_cols=34  Identities=26%  Similarity=0.430  Sum_probs=31.7

Q ss_pred             cccCCCCCCCCCccccccCChhHHhcccccccCC
Q psy12022         12 EKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        12 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      +.|+||+||+|..||+.|.....|..|++.|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4699999999999999999999999999999865

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=2.5e-12  Score=59.58  Aligned_cols=34  Identities=32%  Similarity=0.606  Sum_probs=26.2

Q ss_pred             hhhcCCCCCeeccCCcccccChHHHHhHHhhhccH
Q psy12022         88 KYDCGQEPKYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        88 ~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      ++|+|++| |+|.+|++.|...++|..|++.+|++
T Consensus         1 R~HTgekP-~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKP-YECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCS-EECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCC-EeCCCCcccccchHHHHHHcccccCC
Confidence            46778777 88888888888888888887766654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=3e-12  Score=58.73  Aligned_cols=32  Identities=22%  Similarity=0.432  Sum_probs=30.4

Q ss_pred             cCCCCCCCCCccccccCChhHHhcccccccCC
Q psy12022         14 QNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        14 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      |+||+||+|.+|++.|.++.+|..|+++|.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            78999999999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=4.8e-12  Score=59.09  Aligned_cols=34  Identities=18%  Similarity=0.335  Sum_probs=31.4

Q ss_pred             CcccCCCCCCCCCccccccCChhHHhcccccccC
Q psy12022         11 GEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCG   44 (143)
Q Consensus        11 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~   44 (143)
                      .+.|++|+||+|..|++.|.++..|..|++.|..
T Consensus         3 ~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            3679999999999999999999999999999864

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=1.1e-11  Score=56.76  Aligned_cols=31  Identities=23%  Similarity=0.517  Sum_probs=22.0

Q ss_pred             hcCCCCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         90 DCGQEPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        90 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |+|++| |+|.+|++.|...++|..|+++|..
T Consensus         2 ~TGekP-y~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRP-FVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSC-EECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCcc-ccCCCCCCcccChHHHHHHccccCC
Confidence            456666 7777777777777777777777654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.3e-11  Score=57.95  Aligned_cols=36  Identities=25%  Similarity=0.515  Sum_probs=31.4

Q ss_pred             CCCCCCCCCccccccCChhHHhcccc-cccCCCCcccC
Q psy12022         15 NHAEMFACDVCGKEYKQKYGLNRHKK-YDCGQEPKYHG   51 (143)
Q Consensus        15 ~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~~c   51 (143)
                      +.++||+|..||+.|.....|..|++ .|.+++| |.|
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekp-y~C   37 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKC   37 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCS
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCccCCCcC-cCC
Confidence            35799999999999999999999985 7999988 444

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=2.3e-11  Score=52.82  Aligned_cols=27  Identities=30%  Similarity=0.525  Sum_probs=20.1

Q ss_pred             CCCeeccCCcccccChHHHHhHHhhhcc
Q psy12022         94 EPKYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      +| |+|.+|++.|..++.|..|+++|++
T Consensus         2 KP-y~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KP-FQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CC-EECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cC-ccCCCCcCEecccccccccCCCccC
Confidence            45 7777777777777777777777754

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.06  E-value=4.9e-11  Score=52.33  Aligned_cols=26  Identities=19%  Similarity=0.314  Sum_probs=14.4

Q ss_pred             eeccCCcccccChHHHHhHHhhhccH
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      |.|++|++.|...+.|..|+++|+++
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           3 FVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             BCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CCCCCCCCCCCCchHcccccCcccCC
Confidence            55555555555555555555555543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=7.7e-11  Score=51.61  Aligned_cols=27  Identities=30%  Similarity=0.546  Sum_probs=13.6

Q ss_pred             ccccCcccccccChHHHHhhhhhhcCC
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      ||.|++|+++|...+.|..|+++|+|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            445555555555555555555555443

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=5e-11  Score=51.73  Aligned_cols=28  Identities=21%  Similarity=0.589  Sum_probs=26.5

Q ss_pred             CCccccCcccccccChHHHHhhhhhhcC
Q psy12022         65 AEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        65 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      ++||+|++|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5789999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.02  E-value=6.3e-11  Score=52.00  Aligned_cols=29  Identities=24%  Similarity=0.665  Sum_probs=27.4

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCC
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQE   46 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   46 (143)
                      +||.|+.|++.|.....|..|+++|.+++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999874

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=6.1e-11  Score=51.96  Aligned_cols=29  Identities=28%  Similarity=0.536  Sum_probs=27.3

Q ss_pred             CCCCCCccccccCChhHHhcccccccCCC
Q psy12022         18 EMFACDVCGKEYKQKYGLNRHKKYDCGQE   46 (143)
Q Consensus        18 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   46 (143)
                      |||.|..||+.|.+.+.|..|+++|.+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999874

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.2e-10  Score=49.27  Aligned_cols=24  Identities=25%  Similarity=0.467  Sum_probs=19.5

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |+|.+||+.|...+.|..|+++|+
T Consensus         3 y~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           3 YKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ccCCCCcCeeccCcccccCccCCC
Confidence            888888888888888888888763

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.3e-10  Score=53.65  Aligned_cols=33  Identities=12%  Similarity=0.318  Sum_probs=29.4

Q ss_pred             cccCCCccccCcccccccChHHHHhhhhhhcCC
Q psy12022         61 KQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        61 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      +|+|++||.|++|++.|.....|..|++.++++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            588999999999999999999999998766553

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.91  E-value=4.6e-11  Score=58.54  Aligned_cols=39  Identities=23%  Similarity=0.621  Sum_probs=29.5

Q ss_pred             HHHhhhhhhcCCCCCeeccC--CcccccChHHHHhHHhhhccH
Q psy12022         82 GLNRHKKYDCGQEPKYQCLY--CPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        82 ~l~~h~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      .+..|+. |+|++| |.|.+  |++.|...+.|..|+++|.++
T Consensus         6 ~l~~h~~-h~gekp-y~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKT-FECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTE-EECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCC-eECCcCCCCccccCchHHHhhcccccCC
Confidence            3455664 777777 88877  888888888888888888765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=3.7e-10  Score=47.76  Aligned_cols=26  Identities=31%  Similarity=0.701  Sum_probs=24.5

Q ss_pred             CccccCcccccccChHHHHhhhhhhc
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~   91 (143)
                      +||+|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=7.6e-10  Score=50.89  Aligned_cols=32  Identities=34%  Similarity=0.723  Sum_probs=29.0

Q ss_pred             cccCc--ccccccChHHHHhhhhhhcCCCCCeecc
Q psy12022         68 FACDV--CGKEYKQKYGLNRHKKYDCGQEPKYQCL  100 (143)
Q Consensus        68 ~~C~~--C~~~~~~~~~l~~h~~~h~~~~~~~~C~  100 (143)
                      |.|+.  |++.|.....|..|+++|+|++| |+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekp-y~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCC-EeCC
Confidence            56765  99999999999999999999888 9986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=3.2e-09  Score=46.62  Aligned_cols=25  Identities=28%  Similarity=0.465  Sum_probs=14.6

Q ss_pred             eeccC--CcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLY--CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~--C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.+  |++.|...+.|+.|+++|++
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           3 HKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             eeCCCCCCCceECChhHhhhhcCcCcC
Confidence            55555  66666666666666655544

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=2.3e-09  Score=47.09  Aligned_cols=28  Identities=25%  Similarity=0.552  Sum_probs=26.2

Q ss_pred             CccccCc--ccccccChHHHHhhhhhhcCC
Q psy12022         66 EMFACDV--CGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        66 ~~~~C~~--C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      +||.|+.  |+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5899988  999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.3e-09  Score=46.64  Aligned_cols=25  Identities=40%  Similarity=0.937  Sum_probs=16.3

Q ss_pred             eeccC--CcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLY--CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~--C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.+  |++.|...+.|..|+++|++
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           3 FQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             ccCCCCCCCceECcHHHcCccccccCC
Confidence            66665  66666666666666666654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.5e-09  Score=46.57  Aligned_cols=28  Identities=29%  Similarity=0.789  Sum_probs=25.8

Q ss_pred             CccccCc--ccccccChHHHHhhhhhhcCC
Q psy12022         66 EMFACDV--CGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        66 ~~~~C~~--C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      +||.|+.  |+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5799977  999999999999999999985

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.69  E-value=2.2e-09  Score=52.38  Aligned_cols=34  Identities=24%  Similarity=0.555  Sum_probs=29.9

Q ss_pred             cccCCCccccCc--ccccccChHHHHhhhhhhcCCC
Q psy12022         61 KQNHAEMFACDV--CGKEYKQKYGLNRHKKYDCGQE   94 (143)
Q Consensus        61 ~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~h~~~~   94 (143)
                      .+++++||.|..  |++.|...+.|..|+++|+|++
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            466677799977  9999999999999999999864

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.1e-08  Score=45.27  Aligned_cols=20  Identities=20%  Similarity=0.243  Sum_probs=10.0

Q ss_pred             CcccccChHHHHhHHhhhcc
Q psy12022        102 CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus       102 C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |++.|...++|..|+++|++
T Consensus        10 C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_          10 CGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCcCChhHhhhhcCcccc
Confidence            55555555555555555443

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=9.3e-09  Score=45.52  Aligned_cols=29  Identities=34%  Similarity=0.769  Sum_probs=26.3

Q ss_pred             CCCCCCc--cccccCChhHHhcccccccCCC
Q psy12022         18 EMFACDV--CGKEYKQKYGLNRHKKYDCGQE   46 (143)
Q Consensus        18 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~   46 (143)
                      +||.|+.  |++.|....+|..|+++|.+++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6899964  9999999999999999999874

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.59  E-value=2.1e-08  Score=44.57  Aligned_cols=27  Identities=22%  Similarity=0.408  Sum_probs=19.0

Q ss_pred             CCCeeccC--CcccccChHHHHhHHhhhcc
Q psy12022         94 EPKYQCLY--CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        94 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  121 (143)
                      +| |.|.+  |++.|...++|.+|+++|..
T Consensus         2 rP-~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RP-YSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CS-BCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cC-eECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            44 77776  77777777777777777654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=1.4e-08  Score=44.12  Aligned_cols=25  Identities=28%  Similarity=0.570  Sum_probs=18.4

Q ss_pred             eeccC--CcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLY--CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~--C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |+|.+  |++.|...++|.+|+++|.+
T Consensus         3 ~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           3 YACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             eECCCCCCCcEECchhHhhhhcCccCC
Confidence            77776  77777777777777777653

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.58  E-value=1.4e-08  Score=45.16  Aligned_cols=29  Identities=31%  Similarity=0.594  Sum_probs=26.8

Q ss_pred             CCCCCCCc--cccccCChhHHhcccccccCC
Q psy12022         17 AEMFACDV--CGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        17 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      |+||.|++  |++.|....+|..|+++|...
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999999753

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.7e-08  Score=40.05  Aligned_cols=24  Identities=25%  Similarity=0.361  Sum_probs=17.4

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      .+|.+|++.|+.+..|..|++.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            667777777777777777777664

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=3e-08  Score=43.02  Aligned_cols=27  Identities=30%  Similarity=0.749  Sum_probs=24.9

Q ss_pred             CccccCc--ccccccChHHHHhhhhhhcC
Q psy12022         66 EMFACDV--CGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        66 ~~~~C~~--C~~~~~~~~~l~~h~~~h~~   92 (143)
                      +||+|+.  |++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5799977  99999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=3.4e-08  Score=42.40  Aligned_cols=24  Identities=33%  Similarity=0.617  Sum_probs=17.6

Q ss_pred             eeccC--CcccccChHHHHhHHhhhc
Q psy12022         97 YQCLY--CPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~--C~~~f~~~~~l~~H~~~~~  120 (143)
                      |+|.+  |++.|...++|+.|+++|+
T Consensus         3 f~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           3 YVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             cCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            77776  7777777777777777763

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=2e-08  Score=46.02  Aligned_cols=31  Identities=32%  Similarity=0.628  Sum_probs=27.3

Q ss_pred             CCCCc--cccccCChhHHhcccccccCCCCcccC
Q psy12022         20 FACDV--CGKEYKQKYGLNRHKKYDCGQEPKYHG   51 (143)
Q Consensus        20 ~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~~c   51 (143)
                      |.|+.  |++.|.....|..|+++|.+++| |.|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekp-y~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCC-EeC
Confidence            67876  99999999999999999999998 443

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.40  E-value=1.5e-07  Score=39.03  Aligned_cols=27  Identities=19%  Similarity=0.410  Sum_probs=23.1

Q ss_pred             CCCCeeccCCcccccChHHHHhHHhhhc
Q psy12022         93 QEPKYQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        93 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      ++| |.|.+||+.|..+....+|.++|.
T Consensus         1 EkP-f~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKP-FACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCC-EECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCC-cccchhhhhhhcchhhhhhhhhcc
Confidence            356 999999999999999999998874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=1.1e-07  Score=38.17  Aligned_cols=26  Identities=35%  Similarity=0.729  Sum_probs=24.0

Q ss_pred             ccccCcccccccChHHHHhhhhhhcC
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      |.+|+.|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            47899999999999999999999975

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=3.7e-08  Score=42.28  Aligned_cols=26  Identities=23%  Similarity=0.537  Sum_probs=24.0

Q ss_pred             CCCCCCc--cccccCChhHHhccccccc
Q psy12022         18 EMFACDV--CGKEYKQKYGLNRHKKYDC   43 (143)
Q Consensus        18 ~~~~C~~--C~~~f~~~~~l~~h~~~h~   43 (143)
                      +||.|++  |++.|....+|..|+++|.
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999998  9999999999999998874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.5e-07  Score=37.89  Aligned_cols=25  Identities=24%  Similarity=0.192  Sum_probs=19.4

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      ..|.+||+.|...+.|++|+.+|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            5777888888888888888877765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=3.3e-07  Score=39.46  Aligned_cols=31  Identities=45%  Similarity=1.022  Sum_probs=27.3

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCCCCCe
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKY   97 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~   97 (143)
                      +...|..||+.|.....|+.|...|.+++| |
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekp-y   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKP-Y   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCC-C
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCC-C
Confidence            346799999999999999999999999887 6

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.3e-06  Score=36.74  Aligned_cols=25  Identities=24%  Similarity=0.517  Sum_probs=14.9

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|++|...|..++.+.-|.+.|.+
T Consensus         4 ~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           4 YSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             SEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             cccchHHHHhhccccceEeeecccC
Confidence            6666666666666666666655543

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=1.5e-06  Score=35.94  Aligned_cols=27  Identities=33%  Similarity=0.778  Sum_probs=24.6

Q ss_pred             CCccccCcccccccChHHHHhhhhhhc
Q psy12022         65 AEMFACDVCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        65 ~~~~~C~~C~~~~~~~~~l~~h~~~h~   91 (143)
                      ++||.|..||+.|..+.....|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478999999999999999999999884

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.4e-06  Score=35.78  Aligned_cols=25  Identities=24%  Similarity=0.713  Sum_probs=14.0

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |+|..|...-...+.|..|++.|++
T Consensus         4 fkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           4 FKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             ceeeecccccCCchheEEeeecccC
Confidence            5555555555555555555555543

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=5.9e-07  Score=37.78  Aligned_cols=30  Identities=27%  Similarity=0.599  Sum_probs=27.3

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCCC
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQE   46 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   46 (143)
                      |+||.|+.|++.|..+..+.-|.++|.+..
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~v   30 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSV   30 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCcc
Confidence            689999999999999999999999988753

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=2e-06  Score=35.17  Aligned_cols=26  Identities=31%  Similarity=0.703  Sum_probs=24.1

Q ss_pred             cccCcccccccChHHHHhhhhhhcCC
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      ..|.+||+.|...+.|..|..+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            67999999999999999999999874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.99  E-value=2.4e-06  Score=33.88  Aligned_cols=24  Identities=25%  Similarity=0.433  Sum_probs=20.9

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678899999999999999998874

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=3.9e-06  Score=34.42  Aligned_cols=29  Identities=21%  Similarity=0.474  Sum_probs=26.6

Q ss_pred             CCccccCcccccccChHHHHhhhhhhcCC
Q psy12022         65 AEMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        65 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      ++||+|..|.+...+++.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            47999999999999999999999999874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.5e-06  Score=36.66  Aligned_cols=31  Identities=42%  Similarity=0.932  Sum_probs=28.2

Q ss_pred             CCCCCCCccccccCChhHHhcccccccCCCC
Q psy12022         17 AEMFACDVCGKEYKQKYGLNRHKKYDCGQEP   47 (143)
Q Consensus        17 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   47 (143)
                      .+...|+.||+.|..-..|.+|.-+|.+++|
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            3567899999999999999999999999987

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=6.6e-06  Score=33.92  Aligned_cols=26  Identities=23%  Similarity=0.516  Sum_probs=19.9

Q ss_pred             cccCcccccccChHHHHhhhhhhcCC
Q psy12022         68 FACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        68 ~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      |.|++||.....++.|..|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            67777887777777788888877764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=1.9e-06  Score=34.19  Aligned_cols=22  Identities=27%  Similarity=0.652  Sum_probs=20.5

Q ss_pred             CCCCCccccccCChhHHhcccc
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKK   40 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~   40 (143)
                      ||+|+.|++.|.++.+|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999873

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.84  E-value=4.5e-06  Score=35.32  Aligned_cols=27  Identities=30%  Similarity=0.287  Sum_probs=23.1

Q ss_pred             CeeccCCcccccChHHHHhHHhhhccH
Q psy12022         96 KYQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      ||.|.+|++.|...+-|-+|++..|++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            489999999999999889998877765

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=1.1e-05  Score=32.82  Aligned_cols=24  Identities=29%  Similarity=0.670  Sum_probs=19.7

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |+|..|+..-...+.|.+|+++|.
T Consensus         4 ~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           4 YKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHSC
T ss_pred             cccccccchhcchhhHhhhhhccc
Confidence            888888888888888888888764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.3e-05  Score=33.03  Aligned_cols=24  Identities=38%  Similarity=0.812  Sum_probs=21.8

Q ss_pred             CeeccCCcccccChHHHHhHHhhh
Q psy12022         96 KYQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      ||.|..|+..|..+.+|.+|++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            499999999999999999999853

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.71  E-value=1.9e-05  Score=32.42  Aligned_cols=23  Identities=39%  Similarity=0.629  Sum_probs=20.3

Q ss_pred             eeccC--CcccccChHHHHhHHhhh
Q psy12022         97 YQCLY--CPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        97 ~~C~~--C~~~f~~~~~l~~H~~~~  119 (143)
                      |+|+.  |++.|...+.|++|.++|
T Consensus         4 y~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           4 YECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             ccCCccCccccccCHHHHhhhhhcc
Confidence            88886  889999999999998876

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.9e-05  Score=35.81  Aligned_cols=26  Identities=31%  Similarity=0.678  Sum_probs=22.8

Q ss_pred             CCCCCeeccCCcccccChHHHHhHHhh
Q psy12022         92 GQEPKYQCLYCPYRAKLRFNLKTHINV  118 (143)
Q Consensus        92 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  118 (143)
                      |-+| |.|..|++.|.+.+.+.+|...
T Consensus         2 GiKP-YeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKP-YECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCC-EECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCc-eeccchhhhhhhHHHHHHhhhh
Confidence            5566 9999999999999999998764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.69  E-value=2.1e-05  Score=31.55  Aligned_cols=26  Identities=31%  Similarity=0.707  Sum_probs=20.8

Q ss_pred             ccCcccccccChHHHHhhhhhhcCCC
Q psy12022         69 ACDVCGKEYKQKYGLNRHKKYDCGQE   94 (143)
Q Consensus        69 ~C~~C~~~~~~~~~l~~h~~~h~~~~   94 (143)
                      .|+.|.+.|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888888888888888888888753

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.2e-05  Score=33.08  Aligned_cols=26  Identities=38%  Similarity=0.523  Sum_probs=24.3

Q ss_pred             eeccCCcccccChHHHHhHHhhhccH
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      |.|..|+....-.+-|++|.+.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            89999999999999999999998864

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=1.9e-05  Score=31.18  Aligned_cols=24  Identities=25%  Similarity=0.762  Sum_probs=22.3

Q ss_pred             CCCCccccccCChhHHhccccccc
Q psy12022         20 FACDVCGKEYKQKYGLNRHKKYDC   43 (143)
Q Consensus        20 ~~C~~C~~~f~~~~~l~~h~~~h~   43 (143)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999998875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=2.9e-05  Score=32.45  Aligned_cols=25  Identities=28%  Similarity=0.566  Sum_probs=18.6

Q ss_pred             eeccC--CcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLY--CPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~--C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.+  |++.+...+.|++|++.+|+
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhCC
Confidence            77776  77777777888888776654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.39  E-value=5.8e-05  Score=33.87  Aligned_cols=26  Identities=19%  Similarity=0.570  Sum_probs=17.8

Q ss_pred             ccccCcccccccChHHHHhhhhhhcC
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      .|.|..|++.|.+...|-.|++.|..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             ccCCCCCCCccCCcccccchHhhhcc
Confidence            46677777777777777777776643

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=8.8e-05  Score=30.62  Aligned_cols=25  Identities=60%  Similarity=1.044  Sum_probs=19.0

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|..|.......++|+.|.++.|+
T Consensus         3 y~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           3 YQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             ccccccccccccchhhhhhhhcccc
Confidence            7788887777777788888777665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=8.9e-05  Score=30.55  Aligned_cols=26  Identities=31%  Similarity=0.720  Sum_probs=20.8

Q ss_pred             CeeccCCcccccChHHHHhHHhhhcc
Q psy12022         96 KYQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      ||+|..|.......++|.+|++..|+
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            38888888888888888888877665

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=8.4e-05  Score=31.02  Aligned_cols=27  Identities=30%  Similarity=0.661  Sum_probs=23.4

Q ss_pred             CccccCc--ccccccChHHHHhhhhhhcC
Q psy12022         66 EMFACDV--CGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        66 ~~~~C~~--C~~~~~~~~~l~~h~~~h~~   92 (143)
                      +||.|..  |++++..+++|..|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4688876  99999999999999998765

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=4.8e-05  Score=31.28  Aligned_cols=25  Identities=28%  Similarity=0.575  Sum_probs=22.4

Q ss_pred             CCCCCccccccCChhHHhccccccc
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKYDC   43 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~h~   43 (143)
                      ||.|..|...|..+.+|..||++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            7899999999999999999997543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.0001  Score=29.86  Aligned_cols=26  Identities=19%  Similarity=0.498  Sum_probs=23.9

Q ss_pred             CccccCcccccccChHHHHhhhhhhc
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~   91 (143)
                      +|++|..|.+.-...++|+.|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57999999999999999999999984

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.16  E-value=0.00013  Score=29.96  Aligned_cols=26  Identities=31%  Similarity=0.585  Sum_probs=14.0

Q ss_pred             ccccCc--ccccccChHHHHhhhhhhcC
Q psy12022         67 MFACDV--CGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        67 ~~~C~~--C~~~~~~~~~l~~h~~~h~~   92 (143)
                      ||+|.+  |.+.|.+...|..|...|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            445543  55555555555555555554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00025  Score=27.88  Aligned_cols=23  Identities=22%  Similarity=0.511  Sum_probs=18.5

Q ss_pred             CeeccCCcccccChHHHHhHHhh
Q psy12022         96 KYQCLYCPYRAKLRFNLKTHINV  118 (143)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~  118 (143)
                      ||+|..|...|..+.+|+.|+-.
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            38888888888888888888754

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=0.00011  Score=29.35  Aligned_cols=26  Identities=31%  Similarity=0.707  Sum_probs=23.4

Q ss_pred             CCCccccccCChhHHhcccccccCCC
Q psy12022         21 ACDVCGKEYKQKYGLNRHKKYDCGQE   46 (143)
Q Consensus        21 ~C~~C~~~f~~~~~l~~h~~~h~~~~   46 (143)
                      .|+.|.++|.++..|..|-+.|.+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999998888763

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.0001  Score=31.09  Aligned_cols=25  Identities=16%  Similarity=0.239  Sum_probs=19.2

Q ss_pred             CeeccC--CcccccChHHHHhHH-hhhc
Q psy12022         96 KYQCLY--CPYRAKLRFNLKTHI-NVKH  120 (143)
Q Consensus        96 ~~~C~~--C~~~f~~~~~l~~H~-~~~~  120 (143)
                      ||.|..  |.+.|+..++..+|+ ++|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            388887  888888888888886 6653

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.04  E-value=0.0002  Score=32.08  Aligned_cols=26  Identities=27%  Similarity=0.543  Sum_probs=23.9

Q ss_pred             eeccCCcccccChHHHHhHHhhhccH
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      |+|..|++.|.+...|--|+..|..+
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             cCCCCCCCccCCcccccchHhhhcch
Confidence            99999999999999999999988654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00045  Score=28.42  Aligned_cols=27  Identities=19%  Similarity=0.386  Sum_probs=24.0

Q ss_pred             CccccCcccccccChHHHHhhhhhhcC
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      +||.|..|.+.....+.|..|+.+.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            479999999999999999999987655

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.01  E-value=0.00039  Score=28.42  Aligned_cols=25  Identities=20%  Similarity=0.515  Sum_probs=16.7

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|..|...|...-.|+.|+..|.+
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            6666776677666666666666554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.99  E-value=0.00032  Score=28.70  Aligned_cols=28  Identities=25%  Similarity=0.717  Sum_probs=25.2

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCC
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      .-|.|..|...|.....|..||-.|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            3488999999999999999999999874

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00059  Score=27.62  Aligned_cols=23  Identities=22%  Similarity=0.537  Sum_probs=13.7

Q ss_pred             eeccCCcccccChHHHHhHHhhh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      .+|..|..+...+..|+.|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            45666666666666666665555

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.80  E-value=0.00046  Score=28.19  Aligned_cols=26  Identities=27%  Similarity=0.561  Sum_probs=22.3

Q ss_pred             CccccCc--ccccccChHHHHhhhhhhc
Q psy12022         66 EMFACDV--CGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        66 ~~~~C~~--C~~~~~~~~~l~~h~~~h~   91 (143)
                      .||.|+.  |++.|...+.|..|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            4688876  9999999999999988773

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.76  E-value=0.00046  Score=29.01  Aligned_cols=26  Identities=19%  Similarity=0.506  Sum_probs=22.3

Q ss_pred             ccccCcccccccChHHHHhhhhhhcC
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      ||.|.+|++.|....-+..|...-++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            68999999999999999999875544

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00045  Score=34.60  Aligned_cols=44  Identities=16%  Similarity=0.337  Sum_probs=38.1

Q ss_pred             CCCCCCCCCCcccCCCCCCCCCccccccCChhHHhcccccccCC
Q psy12022          2 LPKDFSSWPGEKQNHAEMFACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      |+++|.-.+.........|.|.+|+..|.+...|..|...|..+
T Consensus         1 LKRDF~il~~~~~~~s~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1           1 LKRDFIILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             CCCCCCCCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             CCcceeecCCCcccCCceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            56788888887788888999999999999999999999888654

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00076  Score=27.28  Aligned_cols=25  Identities=24%  Similarity=0.503  Sum_probs=22.7

Q ss_pred             ccccCcccccccChHHHHhhhhhhc
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDC   91 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~   91 (143)
                      |.+|++|.++.+++..|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4689999999999999999999885

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00021  Score=31.80  Aligned_cols=28  Identities=25%  Similarity=0.548  Sum_probs=24.0

Q ss_pred             CCCCCCCCc--cccccCChhHHhccccccc
Q psy12022         16 HAEMFACDV--CGKEYKQKYGLNRHKKYDC   43 (143)
Q Consensus        16 ~~~~~~C~~--C~~~f~~~~~l~~h~~~h~   43 (143)
                      .++||.|..  |++.|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            378999954  9999999999999987664

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00075  Score=27.69  Aligned_cols=28  Identities=32%  Similarity=0.541  Sum_probs=24.4

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCC
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      +||+|..|.....+.+.|..|++.-+++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            4799999999999999999999876663

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00073  Score=30.44  Aligned_cols=28  Identities=18%  Similarity=0.514  Sum_probs=23.9

Q ss_pred             cCCCccccCcccccccChHHHHhhhhhh
Q psy12022         63 NHAEMFACDVCGKEYKQKYGLNRHKKYD   90 (143)
Q Consensus        63 ~~~~~~~C~~C~~~~~~~~~l~~h~~~h   90 (143)
                      +|-+||.|..|++.|-...++..|....
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            4568899999999999999999887643

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.49  E-value=0.00091  Score=27.39  Aligned_cols=27  Identities=15%  Similarity=0.207  Sum_probs=23.2

Q ss_pred             CeeccC--CcccccChHHHHhHHhhhccH
Q psy12022         96 KYQCLY--CPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus        96 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      ||.|..  |.+.|.....|.+|..+|.++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            388886  999999999999999988753

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0016  Score=28.91  Aligned_cols=26  Identities=23%  Similarity=0.432  Sum_probs=19.4

Q ss_pred             CCCCeeccC--CcccccChHHHHhHHhhh
Q psy12022         93 QEPKYQCLY--CPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        93 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~  119 (143)
                      ++| |.|..  |+..|.+...|..|...|
T Consensus         4 dkP-F~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKP-FLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCC-EECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCc-eecCCCCccccccchHHHHHhhhhh
Confidence            455 88854  888888888888877765

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.45  E-value=0.0011  Score=26.66  Aligned_cols=22  Identities=23%  Similarity=0.283  Sum_probs=17.7

Q ss_pred             CeeccCCcccccChHHHHhHHh
Q psy12022         96 KYQCLYCPYRAKLRFNLKTHIN  117 (143)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~  117 (143)
                      ||+|..||+.+-.+.+|-.|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4888999988888888877754

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.00033  Score=29.43  Aligned_cols=27  Identities=15%  Similarity=0.539  Sum_probs=22.6

Q ss_pred             CCCCCCc--cccccCChhHHhccc-ccccC
Q psy12022         18 EMFACDV--CGKEYKQKYGLNRHK-KYDCG   44 (143)
Q Consensus        18 ~~~~C~~--C~~~f~~~~~l~~h~-~~h~~   44 (143)
                      +||.|..  |.+.|.+.++-..|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6899988  999999999888887 66653

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.29  E-value=0.0023  Score=25.11  Aligned_cols=24  Identities=25%  Similarity=0.638  Sum_probs=19.3

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |.|+.|-+.|..++++..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            778888888888888888877654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.18  E-value=0.0019  Score=25.89  Aligned_cols=23  Identities=39%  Similarity=0.657  Sum_probs=20.0

Q ss_pred             ccccCcccccccChHHHHhhhhh
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKY   89 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~   89 (143)
                      ||+|..||+.+..+..|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            58999999999999999888653

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.002  Score=26.31  Aligned_cols=26  Identities=31%  Similarity=0.690  Sum_probs=21.5

Q ss_pred             CCCCCccccccCChhHHhcccccccC
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKYDCG   44 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~h~~   44 (143)
                      .|.|.+||+...+...+.-|.....+
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            68999999999999998888755443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.0045  Score=24.83  Aligned_cols=24  Identities=21%  Similarity=0.510  Sum_probs=16.5

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |.|+.|+-....+++|.-|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            667777777777777777766544

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0037  Score=26.74  Aligned_cols=23  Identities=17%  Similarity=0.303  Sum_probs=17.9

Q ss_pred             eeccCCcccccChHHHHhHHhhh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      |.|..|++.|.....+.+|....
T Consensus         5 fvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeecccccchhcchHHHHHhhhc
Confidence            78888888888888888776543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0047  Score=26.68  Aligned_cols=24  Identities=25%  Similarity=0.448  Sum_probs=18.5

Q ss_pred             cCcccccccChHHHHhhhhhhcCC
Q psy12022         70 CDVCGKEYKQKYGLNRHKKYDCGQ   93 (143)
Q Consensus        70 C~~C~~~~~~~~~l~~h~~~h~~~   93 (143)
                      |+--++.|.....|..|++.|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            344446688899999999999885

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.007  Score=28.14  Aligned_cols=24  Identities=17%  Similarity=0.148  Sum_probs=18.8

Q ss_pred             eeccCCcccccChHHHHhHHhhhc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |.|..|++.|.....|+.|...|-
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeccccccccCCHHHHhHhHHhcC
Confidence            778888888888888888877653

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0085  Score=27.83  Aligned_cols=24  Identities=25%  Similarity=0.725  Sum_probs=22.0

Q ss_pred             ccccCcccccccChHHHHhhhhhh
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYD   90 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h   90 (143)
                      -++|..|++.|.....|..|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            489999999999999999998877

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.41  E-value=0.012  Score=25.12  Aligned_cols=26  Identities=31%  Similarity=0.777  Sum_probs=22.8

Q ss_pred             ccccCcccccccChHHHHhhhhhhcC
Q psy12022         67 MFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        67 ~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      .|.|..||+.|.....+..|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            38999999999999999989887766

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.70  E-value=0.029  Score=23.63  Aligned_cols=25  Identities=32%  Similarity=0.747  Sum_probs=21.7

Q ss_pred             CCCCCccccccCChhHHhccccccc
Q psy12022         19 MFACDVCGKEYKQKYGLNRHKKYDC   43 (143)
Q Consensus        19 ~~~C~~C~~~f~~~~~l~~h~~~h~   43 (143)
                      .|.|..||-.|.+.+.|..|+...+
T Consensus         8 rf~c~pcgirfss~stleahqtyyc   32 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAYYC   32 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTTTT
T ss_pred             ceeccccceeecChhHHHhhhheee
Confidence            5889999999999999999986443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.032  Score=22.42  Aligned_cols=18  Identities=11%  Similarity=0.327  Sum_probs=12.9

Q ss_pred             CcccccChHHHHhHHhhh
Q psy12022        102 CPYRAKLRFNLKTHINVK  119 (143)
Q Consensus       102 C~~~f~~~~~l~~H~~~~  119 (143)
                      |++.|...+.+++|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            667777777777777665

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.23  E-value=0.051  Score=25.03  Aligned_cols=27  Identities=26%  Similarity=0.604  Sum_probs=17.8

Q ss_pred             CCCCeeccCCcccccChHHHHhHHhhhc
Q psy12022         93 QEPKYQCLYCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        93 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~  120 (143)
                      ++| ..|+.|+.......+|++|+..-|
T Consensus        22 ~qp-atcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQP-ATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCC-EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCC-CCCchHHHHHHHHHHHHHHHHHHh
Confidence            344 777777777777777777766544

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.01  E-value=0.033  Score=28.21  Aligned_cols=23  Identities=39%  Similarity=0.479  Sum_probs=18.2

Q ss_pred             eeccCCcccccChHHHHhHHhhh
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~  119 (143)
                      |-|..|++.|.+...|..|.+..
T Consensus        16 fYCv~C~K~F~se~~l~~H~ksK   38 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRSK   38 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTCH
T ss_pred             EecccccCccCCHHHHHHHHccc
Confidence            77888888888888888887654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.026  Score=24.26  Aligned_cols=22  Identities=14%  Similarity=0.024  Sum_probs=18.0

Q ss_pred             CCcccccChHHHHhHHhhhccH
Q psy12022        101 YCPYRAKLRFNLKTHINVKHSY  122 (143)
Q Consensus       101 ~C~~~f~~~~~l~~H~~~~~~~  122 (143)
                      .=++.|.....|..|+++|+++
T Consensus        12 R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          12 RELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCcchhHHHHHHHHhhcCCC
Confidence            3446799999999999999864

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.21  E-value=0.022  Score=28.44  Aligned_cols=36  Identities=17%  Similarity=0.457  Sum_probs=26.1

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCCCCCeeccCCccc
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPYR  105 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~~  105 (143)
                      ..|.|+.|++.|.....+.. +..-.  .. |.|..|+..
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~L-~d~~~--~~-F~C~~C~~e   48 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQL-FDPMT--GT-FRCTFCHTE   48 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHHH-EETTT--TE-EBCSSSCCB
T ss_pred             CceECCCCCCCcchhhHHHh-cCcCC--Ce-EEecCCCCE
Confidence            45999999999998877654 22222  34 999999854

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.78  E-value=0.06  Score=26.70  Aligned_cols=28  Identities=25%  Similarity=0.509  Sum_probs=23.5

Q ss_pred             CeeccCCcccccChHHHHhHHhhhccHH
Q psy12022         96 KYQCLYCPYRAKLRFNLKTHINVKHSYE  123 (143)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~  123 (143)
                      .|.|..|+-.|.....|..|+..|..+.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hneef   45 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHNEEF   45 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhccHHH
Confidence            3999999999999999999998876543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.23  E-value=0.05  Score=27.53  Aligned_cols=29  Identities=14%  Similarity=0.330  Sum_probs=24.0

Q ss_pred             cCCCCCCCCCccccccCChhHHhcccccc
Q psy12022         14 QNHAEMFACDVCGKEYKQKYGLNRHKKYD   42 (143)
Q Consensus        14 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h   42 (143)
                      -.|...|-|-.|++.|.+...|..|+++.
T Consensus        10 ~pG~gqfYCv~C~K~F~se~~l~~H~ksK   38 (67)
T d1zr9a1          10 LPGGGLHRCLACARYFIDSTNLKTHFRSK   38 (67)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCCCCEEecccccCccCCHHHHHHHHccc
Confidence            34556799999999999999999998643

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.14  E-value=0.079  Score=22.54  Aligned_cols=25  Identities=24%  Similarity=0.382  Sum_probs=20.1

Q ss_pred             eeccCCcccccChHHHHhHHhhhcc
Q psy12022         97 YQCLYCPYRAKLRFNLKTHINVKHS  121 (143)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~~~  121 (143)
                      |.|.+|.+.+..-+++-+|....|.
T Consensus         9 yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           9 YRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             EEeehhhHHHHHHHHHHHHHHhhcc
Confidence            8889998888888888888765553

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.75  E-value=0.12  Score=21.25  Aligned_cols=20  Identities=30%  Similarity=0.735  Sum_probs=10.7

Q ss_pred             ccccccChHHHHhhhhhhcC
Q psy12022         73 CGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        73 C~~~~~~~~~l~~h~~~h~~   92 (143)
                      |+-.|.....|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            55555555555555555554

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.57  E-value=0.28  Score=19.23  Aligned_cols=23  Identities=30%  Similarity=0.385  Sum_probs=15.9

Q ss_pred             eecc--CCcccccChHHHHhHHhhh
Q psy12022         97 YQCL--YCPYRAKLRFNLKTHINVK  119 (143)
Q Consensus        97 ~~C~--~C~~~f~~~~~l~~H~~~~  119 (143)
                      |.|.  -|++.|..-..|+.|+-.|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            4554  3888888777777777655

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.23  E-value=0.31  Score=22.29  Aligned_cols=28  Identities=21%  Similarity=0.327  Sum_probs=23.7

Q ss_pred             CCccccCcccccccChHHHHhhhhhhcC
Q psy12022         65 AEMFACDVCGKEYKQKYGLNRHKKYDCG   92 (143)
Q Consensus        65 ~~~~~C~~C~~~~~~~~~l~~h~~~h~~   92 (143)
                      +.|-.|+.|+-....+..|..|+...+=
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            4568999999999999999999887653

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.94  E-value=0.17  Score=22.28  Aligned_cols=25  Identities=20%  Similarity=0.635  Sum_probs=16.7

Q ss_pred             CccccCcccccccChHHHHhhhhhhcCCCCCeeccCCcc
Q psy12022         66 EMFACDVCGKEYKQKYGLNRHKKYDCGQEPKYQCLYCPY  104 (143)
Q Consensus        66 ~~~~C~~C~~~~~~~~~l~~h~~~h~~~~~~~~C~~C~~  104 (143)
                      .-|.|+.||..+             .|+ +|..|++|+.
T Consensus         4 ~~~~C~vCG~i~-------------~g~-~P~~CPvCg~   28 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDE-APEYCPVCGA   28 (37)
T ss_dssp             CEEECTTTCCEE-------------ESC-CCSBCTTTCC
T ss_pred             cEEECCCCCCEe-------------cCC-CCCcCCCCCC
Confidence            347888888654             343 3378888884

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.20  E-value=0.31  Score=20.89  Aligned_cols=25  Identities=20%  Similarity=0.525  Sum_probs=20.9

Q ss_pred             CCCccccccCChhHHhcccccccCC
Q psy12022         21 ACDVCGKEYKQKYGLNRHKKYDCGQ   45 (143)
Q Consensus        21 ~C~~C~~~f~~~~~l~~h~~~h~~~   45 (143)
                      -|..|+-.|.+...+..|.+..+..
T Consensus        10 YC~~CDI~Fn~~~T~~aHKk~YCss   34 (36)
T d1fu9a_          10 YCSTCDISFNYVKTYLAHKQFYCKN   34 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTSCC
T ss_pred             HHhhCCceehhHHHHHHHHHhcccC
Confidence            4999999999999999998765544

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=80.58  E-value=1.1  Score=17.86  Aligned_cols=24  Identities=33%  Similarity=0.589  Sum_probs=18.6

Q ss_pred             eecc--CCcccccChHHHHhHHhhhc
Q psy12022         97 YQCL--YCPYRAKLRFNLKTHINVKH  120 (143)
Q Consensus        97 ~~C~--~C~~~f~~~~~l~~H~~~~~  120 (143)
                      |.|.  .|+-.|..+.++++|....|
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            5565  48888999999998877655

>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: BED zinc finger
domain: Zinc finger BED domain-containing protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.09  E-value=0.85  Score=22.02  Aligned_cols=30  Identities=23%  Similarity=0.411  Sum_probs=22.5

Q ss_pred             eeccCCcccccCh---HHHHhHHhhhccHHHHH
Q psy12022         97 YQCLYCPYRAKLR---FNLKTHINVKHSYEYIR  126 (143)
Q Consensus        97 ~~C~~C~~~f~~~---~~l~~H~~~~~~~~~~~  126 (143)
                      ..|..|.+.....   ++|..|++..|+++...
T Consensus        23 i~C~lC~k~i~~~GNTtNl~~HL~~rHp~ef~~   55 (60)
T d2ct5a1          23 IYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCE   55 (60)
T ss_dssp             CEETTTTEECCCCSSTHHHHHHHHHSCHHHHHH
T ss_pred             hHHHHHHHHhcccCCcchHHHHHHhcCHHHHHH
Confidence            6788888776544   57889999888876543