Psyllid ID: psy12259

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------85
MFMRLLTAAPAGCRTLNLELEGPITIARDKLLFMMRSPIFERRQMSLRSGQPPPTGGGLIALDSVRPVELWRKTLNNVPKEVDCGLIDINLDGVLDCIVIADNGYLAVLSQATGNLLWRKTNNGYKDGKMKFPLIVDDLTGDGVNDLVLISYMGPSKYQLALLSGSNGVQIGTPLVKEDCDQMTGLNLTSPDTVIYVCVQGERERVASVSISDLYKSRSKSTASSNIDESASHTANGNTASPPVAKLPPQHKSTKRQNTLTLDKYHLVIENTGVCPDHCSAVVNISDDTNHTVYSFNASKTYIMQPLIIHFNNAANGFLLKYWEWQPDKEEQEDYYDKDKIIIIRHLQERIVLVMFSPDGTPGPHIVNASQSDIIQLCHSNSCQPGTSLQEYSLLLADLDKDGSQDLISYLVTYAGPDKSSDIQTWSLVSQIRVIRLEHELPKLYEFLHKKFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEPLKQLVLHKIGKNSRYSGFDYIDWLNFSHTPKVTTCSCFMEFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELLFKDCKINYNNECELYKKGTIIIKSLVPSSTGSPVCNTVYVPLNCDIINDKFWNENPHILDSSVDMPLL
ccccccccccccccEEEEEEccccEEEcccEEEEEEccccccccccccccccccccccEEEEEccccccccccccccccEEEEcccccccccccccEEEEccccEEEEEEcccccEEcccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEcccccccccccccccccccccEEEEccccEEEEEEEccccEEEEEEHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccEEEEccccccEEEEEEccccEEcccEEEEEccccccEEEEEEEEcccccccccccccccEEEEEEEEEEEEEEEEcccccccccEEcccccccEEcccccccccccccccccEEEEEccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEcccccccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEccEEEEEEEEEccccHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHccccccccccccEEEcEEEEEEEcccccccccccEEEEEEEEcccccccccccccccccccccccc
cHHHHHccccccccEEEEEEcccEEEEEccEEEEEccccEEEcccccccccccccccEEEEEEcccccEEEEEcccccccEEEEEEEEccccccccEEEEEccccEEEEccccccEEEEccccccccccccccEEEEccccccccEEEEEEcccHHHcEEEEEEcccccEcccccEEHcHHHHHHcEccccccEEEEEEccccHHHHcccHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccHHccccEEEccccEEEEEccccccccccEEEEEEccccEEEEEEcccccEccEEEEEEEEccccEEEEEEEEEcccccccccccccccEEEEEEEHEEEEEEEEccccccccEEEEcccccEEEEEcccccccccccccccEEEEEEccccccEcEEEEEEEEccccccccHHcccccEEEEEEEcHHHHHHHHHHHHHcccEEEEEcccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHccccccccccEEEEEEcccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccHcHHHHHHHHcccccccccHHHcccEEEEEEEccccccccccccEEEEEEHHHccHHHHHHcHHHHHHccccccc
MFMRLltaapagcrtlnlelegpitIARDKLLFMMRSPiferrqmslrsgqppptggglialdsvrpVELWRKTlnnvpkevdcglidinldgVLDCIVIADNGYLAVLSQATGNLLwrktnngykdgkmkfplivddltgdgvnDLVLISYMGPSKYQLALLsgsngvqigtplvkedcdqmtglnltspdTVIYVCVQGERERVASVSISDlyksrskstassnidesashtangntasppvaklppqhkstkrqntltldKYHLVIentgvcpdhcsavvnisddtnhtvysfnasktyimqplIIHFNNAANGFLLKywewqpdkeeqedyydkdkIIIIRHLQERIVLVmfspdgtpgphivnasqSDIIQlchsnscqpgtslQEYSLLLADLDKDGSQDLISYLVTyagpdkssdiQTWSLVSQIRVIRLEHELPKLYEFLHKKFNDIccaygqsdeysfIFSRNtniynrraDKIASVVCSLFTssygfywdkfcckklkyppafdsrvilyPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQkcghskqepLKQLVLHkigknsrysgfdyidwlnfshtpkvttcscfmefeshdrclpncfivvrvdgkgfhkfteahgfdkpndrsgLWLMSKAAACVIEEFNDICcaygqsdeysFIFSRNtniynrraDKIASVVCSLFTssygfywdkfcckklkyppafdsrvilyPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELLFKDCKINynnecelykkGTIIIkslvpsstgspvcntvyvplncdiindkfwnenphildssvdmpll
MFMRLltaapagcrtlnlelegpITIARDKLLFMMRSPIFERRQMSLRSGQPPPTGGGLIALDSVRPVELWRKTlnnvpkevdCGLIDINLDGVLDCIVIADNGYLAVLSQATGNLLWRKTNNGYKDGKMKFPLIVDDLTGDGVNDLVLISYMGPSKYQLALLSGSNGVQIGTPLVKEDCDQMTGLNLTSPDTVIYVCVQGERERVAsvsisdlyksrskstassnidesashtangntasppvaklppqhKSTKRQNTLTLDKYHLVIENTGVCPDHCSAVVNISDDTNHTVYSFNASKTYIMQPLIIHFNNAANGFLLKYWEWQPDKEEQEDYYDKDKIIIIRHLQERIVLVMFSPDGTPGPHIVNASQSDIIQLCHSNSCQPGTSLQEYSLLLADLDKDGSQDLISYLVTYagpdkssdiQTWSLVSQIRVIRLEHELPKLYEFLHKKFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEPLKQLVLHKIGKNSRYSGFDYIDWLNFSHTPKVTTCSCFMEFESHDRCLPNCFIVVRVDGKGFHKFteahgfdkpndrSGLWLMSKAAACVIEEFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELLFKDCKINYNNECELYKKGTIIIKSLVPSSTGSPVCNTVYVPLNCDIINDKFWNenphildssvdmpll
MFMRLLTAAPAGCRTLNLELEGPITIARDKLLFMMRSPIFERRQMSLRSGQPPPTGGGLIALDSVRPVELWRKTLNNVPKEVDCGLIDINLDGVLDCIVIADNGYLAVLSQATGNLLWRKTNNGYKDGKMKFPLIVDDLTGDGVNDLVLISYMGPSKYQLALLSGSNGVQIGTPLVKEDCDQMTGLNLTSPDTVIYVCVQGERERVASVSISDLYKSRSKSTASSNIDESASHTANGNTASPPVAKLPPQHKSTKRQNTLTLDKYHLVIENTGVCPDHCSAVVNISDDTNHTVYSFNASKTYIMQPLIIHFNNAANGFLLKYWEWQPdkeeqedyydkdkiiiiRHLQERIVLVMFSPDGTPGPHIVNASQSDIIQLCHSNSCQPGTSLQEYSLLLADLDKDGSQDLISYLVTYAGPDKSSDIQTWSLVSQIRVIRLEHELPKLYEFLHKKFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEPLKQLVLHKIGKNSRYSGFDYIDWLNFSHTPKVTTCSCFMEFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELLFKDCKINYNNECELYKKGTIIIKSLVPSSTGSPVCNTVYVPLNCDIINDKFWNENPHILDSSVDMPLL
****LLTAAPAGCRTLNLELEGPITIARDKLLFMMRSPIF*****************GLIALDSVRPVELWRKTLNNVPKEVDCGLIDINLDGVLDCIVIADNGYLAVLSQATGNLLWRKTNNGYKDGKMKFPLIVDDLTGDGVNDLVLISYMGPSKYQLALLSGSNGVQIGTPLVKEDCDQMTGLNLTSPDTVIYVCVQGERERVASV**************************************************LTLDKYHLVIENTGVCPDHCSAVVNISDDTNHTVYSFNASKTYIMQPLIIHFNNAANGFLLKYWEWQPDKEEQEDYYDKDKIIIIRHLQERIVLVMFSPDGTPGPHIVNASQSDIIQLCHSNSCQPGTSLQEYSLLLADLDKDGSQDLISYLVTYAGPDKSSDIQTWSLVSQIRVIRLEHELPKLYEFLHKKFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEPLKQLVLHKIGKNSRYSGFDYIDWLNFSHTPKVTTCSCFMEFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELLFKDCKINYNNECELYKKGTIIIKSLVPSSTGSPVCNTVYVPLNCDIINDKFWNENPHIL*********
********APAGCRTLNLELEGPITIARDKLLFMMRSPI****************GGGLIALDSVRPVELWRKTLNNVPKEVDCGLIDINLDGVLDCIVIADNGYLAVLSQATGNLLWRKTNNGYKDGKMKFPLIVDDLTGDGVNDLVLISYMGPSKYQLALLSGSNGVQIGTPLVKEDCDQMTGLNLTSPDTVIYVCVQGERERVASVSISDLYKSRS***************************LPPQHKSTKRQNTLTLDKYHLVIENTGVCPDHCSAVVNISDDTNHTVYSFNASKTYIMQPLIIHFNNAANGFLLKYWEWQPDKE*****Y***KIIIIRHLQERIVLVMFSPDGTPGPHIVNASQSDIIQLCHSNSCQPGTSLQEYSLLLADLDKDGSQDLISYLVTYAGPDKSSDIQTWSLVSQIRVIRLEHELPKLYEFLHKKFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQK*********************RYSGFDYIDWLNFSHTPKVTTCSCFMEFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGH**QEA**ILRGTVSSEKHELLFKDCKINYNNECELYKKGTIIIKSLV***********VYVPLNCDIINDKFWNENPHILDSSVD****
MFMRLLTAAPAGCRTLNLELEGPITIARDKLLFMMRSPIFERRQMSLRSGQPPPTGGGLIALDSVRPVELWRKTLNNVPKEVDCGLIDINLDGVLDCIVIADNGYLAVLSQATGNLLWRKTNNGYKDGKMKFPLIVDDLTGDGVNDLVLISYMGPSKYQLALLSGSNGVQIGTPLVKEDCDQMTGLNLTSPDTVIYVCVQGERERVASVSIS****************************SPPVAK**********QNTLTLDKYHLVIENTGVCPDHCSAVVNISDDTNHTVYSFNASKTYIMQPLIIHFNNAANGFLLKYWEWQPDKEEQEDYYDKDKIIIIRHLQERIVLVMFSPDGTPGPHIVNASQSDIIQLCHSNSCQPGTSLQEYSLLLADLDKDGSQDLISYLVTYAGPDKSSDIQTWSLVSQIRVIRLEHELPKLYEFLHKKFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEPLKQLVLHKIGKNSRYSGFDYIDWLNFSHTPKVTTCSCFMEFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELLFKDCKINYNNECELYKKGTIIIKSLVPSSTGSPVCNTVYVPLNCDIINDKFWNENPHILDSSVDMPLL
MFMRLLTAAPAGCRTLNLELEGPITIARDKLLFMMRSPIFERRQMSLRSGQPPPTGGGLIALDSVRPVELWRKTLNNVPKEVDCGLIDINLDGVLDCIVIADNGYLAVLSQATGNLLWRKTNNGYKDGKMKFPLIVDDLTGDGVNDLVLISYMGPSKYQLALLSGSNGVQIGTPLVKEDCDQMTGLNLTSPDTVIYVCVQGERERVASVSISDLYKSRSKSTASSNIDESA******NTASPPVAKLPPQHKSTKRQNTLTLDKYHLVIENTGVCPDHCSAVVNISDDTNHTVYSFNASKTYIMQPLIIHFNNAANGFLLKYWEWQPDKEEQEDYYDKDKIIIIRHLQERIVLVMFSPDGTPGPHIVNASQSDIIQLCHSNSCQPGTSLQEYSLLLADLDKDGSQDLISYLVTYAGPDKSSDIQTWSLVSQIRVIRLEHELPKLYEFLHKKFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEPLKQLVLHKIGKNSRYSGFDYIDWLNFSHTPKVTTCSCFMEFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELLFKDCKINYNNECELYKKGTIIIKSLVPSSTGSPVCNTVYVPLNCDIINDKFWNENPHILDSSVD****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFMRLLTAAPAGCRTLNLELEGPITIARDKLLFMMRSPIFERRQMSLRSGQPPPTGGGLIALDSVRPVELWRKTLNNVPKEVDCGLIDINLDGVLDCIVIADNGYLAVLSQATGNLLWRKTNNGYKDGKMKFPLIVDDLTGDGVNDLVLISYMGPSKYQLALLSGSNGVQIGTPLVKEDCDQMTGLNLTSPDTVIYVCVQGERERVASVSISDLYKSRSKSTASSNIDESASHTANGNTASPPVAKLPPQHKSTKRQNTLTLDKYHLVIENTGVCPDHCSAVVNISDDTNHTVYSFNASKTYIMQPLIIHFNNAANGFLLKYWEWQPDKEEQEDYYDKDKIIIIRHLQERIVLVMFSPDGTPGPHIVNASQSDIIQLCHSNSCQPGTSLQEYSLLLADLDKDGSQDLISYLVTYAGPDKSSDIQTWSLVSQIRVIRLEHELPKLYEFLHKKFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEPLKQLVLHKIGKNSRYSGFDYIDWLNFSHTPKVTTCSCFMEFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELLFKDCKINYNNECELYKKGTIIIKSLVPSSTGSPVCNTVYVPLNCDIINDKFWNENPHILDSSVDMPLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query848 2.2.26 [Sep-21-2011]
Q9CY52298 Probable tRNA(His) guanyl yes N/A 0.280 0.798 0.5 1e-71
Q05B50298 Probable tRNA(His) guanyl yes N/A 0.284 0.808 0.509 2e-71
Q9NWX6298 Probable tRNA(His) guanyl yes N/A 0.284 0.808 0.501 7e-71
Q5M965298 Probable tRNA(His) guanyl yes N/A 0.285 0.812 0.484 3e-70
Q9V3N8286 Probable tRNA(His) guanyl yes N/A 0.290 0.860 0.507 2e-69
Q9Y7T3261 tRNA(His) guanylyltransfe yes N/A 0.280 0.911 0.491 1e-63
Q6FPX3237 tRNA(His) guanylyltransfe yes N/A 0.237 0.848 0.546 2e-62
Q6BKD4265 tRNA(His) guanylyltransfe yes N/A 0.283 0.905 0.443 6e-60
Q54E29256 Probable tRNA(His) guanyl yes N/A 0.283 0.937 0.512 9e-60
P53215237 tRNA(His) guanylyltransfe yes N/A 0.239 0.856 0.516 2e-58
>sp|Q9CY52|THG1_MOUSE Probable tRNA(His) guanylyltransferase OS=Mus musculus GN=Thg1l PE=1 SV=1 Back     alignment and function desciption
 Score =  271 bits (694), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 127/254 (50%), Positives = 168/254 (66%), Gaps = 16/254 (6%)

Query: 602 FESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCA 661
           FE  D CLP+C++VVR+DG+ FH+F E H F KPND   L LM+K A  V+EE  DI  A
Sbjct: 41  FEVQDTCLPHCWVVVRLDGRNFHRFAEEHNFAKPNDSRALHLMTKCAQTVMEELEDIVIA 100

Query: 662 YGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYW-DKFCCKKLKYPPAFDSRV 720
           YGQSDEYSF+F + +N + RRA K  ++V S F SSY FYW D F  + L+YPP FD RV
Sbjct: 101 YGQSDEYSFVFRKKSNWFKRRASKFMTLVASQFASSYVFYWRDYFEDQPLRYPPGFDGRV 160

Query: 721 ILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELL 780
           +LYP+ + L+DYLSWRQAD HINNLYNT FW L+Q+ G +  +A++ L+GT++++K+E+L
Sbjct: 161 VLYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQQSGLTPVQAQQRLKGTLTADKNEIL 220

Query: 781 FKDCKINYNNECELYKKGTIIIKSLVPSSTGSPV---------------CNTVYVPLNCD 825
           F +  INYNNE  +Y+KGT+++   V       V                 T  V LNCD
Sbjct: 221 FSEFHINYNNEPHMYRKGTVLVWQKVEEVRTQEVRLPAEMEGEKKAVARTRTRVVALNCD 280

Query: 826 IINDKFWNENPHIL 839
           +I D FW E+P IL
Sbjct: 281 LIGDAFWKEHPEIL 294
Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. This step is essential for proper recognition of the tRNA and for the fidelity of protein synthesis.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 7EC: 9
>sp|Q05B50|THG1_BOVIN Probable tRNA(His) guanylyltransferase OS=Bos taurus GN=THG1L PE=2 SV=1 Back     alignment and function description
>sp|Q9NWX6|THG1_HUMAN Probable tRNA(His) guanylyltransferase OS=Homo sapiens GN=THG1L PE=1 SV=2 Back     alignment and function description
>sp|Q5M965|THG1_RAT Probable tRNA(His) guanylyltransferase OS=Rattus norvegicus GN=Thg1l PE=2 SV=1 Back     alignment and function description
>sp|Q9V3N8|THG1_DROME Probable tRNA(His) guanylyltransferase OS=Drosophila melanogaster GN=l(2)35Bc PE=2 SV=1 Back     alignment and function description
>sp|Q9Y7T3|THG1_SCHPO tRNA(His) guanylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thg1 PE=3 SV=1 Back     alignment and function description
>sp|Q6FPX3|THG1_CANGA tRNA(His) guanylyltransferase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=THG1 PE=3 SV=1 Back     alignment and function description
>sp|Q6BKD4|THG1_DEBHA tRNA(His) guanylyltransferase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=THG1 PE=3 SV=2 Back     alignment and function description
>sp|Q54E29|THG1_DICDI Probable tRNA(His) guanylyltransferase OS=Dictyostelium discoideum GN=thg1 PE=3 SV=1 Back     alignment and function description
>sp|P53215|THG1_YEAST tRNA(His) guanylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THG1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query848
328721876302 PREDICTED: probable tRNA(His) guanylyltr 0.277 0.778 0.588 6e-80
239788252272 ACYPI006122 [Acyrthosiphon pisum] 0.277 0.863 0.588 1e-79
193673956272 PREDICTED: probable tRNA(His) guanylyltr 0.277 0.863 0.588 1e-79
346472171301 hypothetical protein [Amblyomma maculatu 0.284 0.800 0.545 7e-76
91083329291 PREDICTED: similar to interphase cyctopl 0.280 0.817 0.570 1e-75
350414979357 PREDICTED: probable tRNA(His) guanylyltr 0.279 0.663 0.566 4e-75
307207934329 Probable tRNA(His) guanylyltransferase [ 0.279 0.720 0.566 5e-75
340714772328 PREDICTED: probable tRNA(His) guanylyltr 0.279 0.722 0.566 5e-75
321479120256 hypothetical protein DAPPUDRAFT_39947 [D 0.279 0.925 0.555 5e-75
391328630286 PREDICTED: probable tRNA(His) guanylyltr 0.280 0.832 0.564 2e-73
>gi|328721876|ref|XP_001951780.2| PREDICTED: probable tRNA(His) guanylyltransferase-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 143/243 (58%), Positives = 183/243 (75%), Gaps = 8/243 (3%)

Query: 602 FESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCA 661
           FE  DRCL NC+IVVR+DG+ FH+FT +H F+KPND+  L LM+++AA V+EEF D+  A
Sbjct: 42  FEFEDRCLQNCWIVVRLDGRSFHRFTSSHKFEKPNDKRALELMNRSAAAVMEEFRDVSLA 101

Query: 662 YGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCC-KKLKYPPAFDSRV 720
           YGQSDEYSFI  +NT++YNRR  KI S + S+F++SY +YW+ F   KKL YPP+FD+R+
Sbjct: 102 YGQSDEYSFILRKNTDLYNRRQSKIMSAINSIFSASYVYYWNTFFEDKKLLYPPSFDARI 161

Query: 721 ILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELL 780
           +LYPT +NLRDYLSWRQAD HINNLYNTAFWGL+   G S  EAEK+L GTVSSEK+E+L
Sbjct: 162 VLYPTDQNLRDYLSWRQADTHINNLYNTAFWGLISMKGLSNNEAEKVLSGTVSSEKNEIL 221

Query: 781 FKDCKINYNNECELYKKGTIIIKSLV---PSSTGSPVCNTVYVPLNCDIINDKFWNENPH 837
           FK+C  NYNNE  +Y+KGT++++ LV   PS +   V      PL+ DII D FW E   
Sbjct: 222 FKECGTNYNNELPIYRKGTVLVRKLVNLPPSKSKKHVI----CPLHVDIIGDSFWEEYNE 277

Query: 838 ILD 840
           IL+
Sbjct: 278 ILN 280

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|239788252|dbj|BAH70814.1| ACYPI006122 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|193673956|ref|XP_001951797.1| PREDICTED: probable tRNA(His) guanylyltransferase-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|346472171|gb|AEO35930.1| hypothetical protein [Amblyomma maculatum] Back     alignment and taxonomy information
>gi|91083329|ref|XP_974895.1| PREDICTED: similar to interphase cyctoplasmic foci protein 45 [Tribolium castaneum] gi|270007757|gb|EFA04205.1| hypothetical protein TcasGA2_TC014454 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|350414979|ref|XP_003490493.1| PREDICTED: probable tRNA(His) guanylyltransferase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|307207934|gb|EFN85493.1| Probable tRNA(His) guanylyltransferase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340714772|ref|XP_003395898.1| PREDICTED: probable tRNA(His) guanylyltransferase-like isoform 1 [Bombus terrestris] Back     alignment and taxonomy information
>gi|321479120|gb|EFX90076.1| hypothetical protein DAPPUDRAFT_39947 [Daphnia pulex] Back     alignment and taxonomy information
>gi|391328630|ref|XP_003738789.1| PREDICTED: probable tRNA(His) guanylyltransferase-like [Metaseiulus occidentalis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query848
TAIR|locus:2065934567 AT2G31580 [Arabidopsis thalian 0.281 0.421 0.440 2.2e-76
TAIR|locus:2062611537 AT2G32320 [Arabidopsis thalian 0.283 0.446 0.457 2.4e-75
ZFIN|ZDB-GENE-041114-170269 thg1l "tRNA-histidine guanylyl 0.283 0.892 0.517 3.6e-66
UNIPROTKB|Q9NWX6298 THG1L "Probable tRNA(His) guan 0.283 0.805 0.511 4.5e-66
UNIPROTKB|Q05B50298 THG1L "Probable tRNA(His) guan 0.283 0.805 0.511 5.8e-66
MGI|MGI:1913878298 Thg1l "tRNA-histidine guanylyl 0.280 0.798 0.5 2.5e-65
RGD|1359513298 Thg1l "tRNA-histidine guanylyl 0.283 0.805 0.496 2.5e-65
UNIPROTKB|Q5ZIR4269 THG1L "Uncharacterized protein 0.281 0.888 0.513 4.1e-65
UNIPROTKB|E2RA61298 THG1L "Uncharacterized protein 0.281 0.802 0.509 1.8e-64
FB|FBgn0261882286 l(2)35Bc "lethal (2) 35Bc" [Dr 0.288 0.856 0.509 6e-64
TAIR|locus:2065934 AT2G31580 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 539 (194.8 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
 Identities = 108/245 (44%), Positives = 153/245 (62%)

Query:   602 FESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCA 661
             F+  ++ LP  ++VVR+DG  FH+F++ H F+KPND   L LM+  A  V+EEF DI  A
Sbjct:   325 FQFENKLLPLTWVVVRIDGCHFHRFSDVHEFEKPNDEQALKLMNSCAVAVLEEFEDIHFA 384

Query:   662 YGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCC-KKLKYPPAFDSRV 720
             YG SDEYSF+  + + +Y R++ KI S V S FTS+Y   W +F   K+LKYPP+FD R 
Sbjct:   385 YGVSDEYSFVLKKESELYKRQSSKIISAVASFFTSTYVLQWGEFFPHKELKYPPSFDGRA 444

Query:   721 ILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELL 780
             + YPT   L DYL+WRQ D HINN YNT FW LV K G +K +++  L+GT + EK+ELL
Sbjct:   445 VCYPTYNILLDYLAWRQVDCHINNQYNTCFWMLV-KSGKNKTQSQDYLKGTQTREKNELL 503

Query:   781 FKDCKINYNNECELYKKGTIIIKSLVPSS---TGSPVCNTVYVPLNCDIINDKFWNENPH 837
              +   I YN+   +++ G+ + +     +   +G  +   V V  +C+II   FW E+ H
Sbjct:   504 SRQFGIEYNSLPVIFRMGSSVFRLKEAENGVVSGKKLEGEVVVD-HCNIIERCFWEEHLH 562

Query:   838 ILDSS 842
             IL  S
Sbjct:   563 ILSYS 567
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006400 "tRNA modification" evidence=IEA
GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA
TAIR|locus:2062611 AT2G32320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-170 thg1l "tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NWX6 THG1L "Probable tRNA(His) guanylyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q05B50 THG1L "Probable tRNA(His) guanylyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1913878 Thg1l "tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1359513 Thg1l "tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZIR4 THG1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2RA61 THG1L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0261882 l(2)35Bc "lethal (2) 35Bc" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P53215THG1_YEAST2, ., 7, ., 7, ., 7, 90.51690.23930.8565yesN/A
Q9V3N8THG1_DROME2, ., 7, ., 7, ., 7, 90.50790.29000.8601yesN/A
Q9NWX6THG1_HUMAN2, ., 7, ., 7, ., 7, 90.50190.28410.8087yesN/A
Q6CW75THG1_KLULA2, ., 7, ., 7, ., 7, 90.52190.23700.8481yesN/A
Q54E29THG1_DICDI2, ., 7, ., 7, ., 7, 90.51220.28300.9375yesN/A
Q6FPX3THG1_CANGA2, ., 7, ., 7, ., 7, 90.54630.23700.8481yesN/A
Q05B50THG1_BOVIN2, ., 7, ., 7, ., 7, 90.50970.28410.8087yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.7LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query848
COG4021249 COG4021, COG4021, Uncharacterized conserved protei 9e-78
pfam04446131 pfam04446, Thg1, tRNAHis guanylyltransferase 6e-60
pfam14413120 pfam14413, Thg1C, Thg1 C terminal domain 2e-41
COG4021249 COG4021, COG4021, Uncharacterized conserved protei 2e-33
pfam04446131 pfam04446, Thg1, tRNAHis guanylyltransferase 8e-30
pfam14413120 pfam14413, Thg1C, Thg1 C terminal domain 2e-15
pfam1351761 pfam13517, VCBS, Family description 3e-04
>gnl|CDD|226508 COG4021, COG4021, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information 
 Score =  251 bits (643), Expect = 9e-78
 Identities = 94/207 (45%), Positives = 127/207 (61%), Gaps = 5/207 (2%)

Query: 598 CFMEFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEF-N 656
              E  +HDR LP  +IV+R+DG+GFHKFT+   F+KP D   L LM+  A  ++ ++  
Sbjct: 7   YVREVYAHDRILPQTYIVLRIDGRGFHKFTKFLDFEKPYDERFLKLMNATAKNLVLKYGL 66

Query: 657 DICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFCCKKLKYPPAF 716
           DI  AY  SDE SF+   +T  +N R +K+ SV  S FTS++   W KF     K+ P+F
Sbjct: 67  DIILAYTFSDEISFLLKSSTVPFNGRVEKLDSVFASFFTSAFTRLWAKF--FPEKHLPSF 124

Query: 717 DSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEK 776
           DSR + YP    + DY  WRQ +A  NNLY+T FW L+   G + QEAE+ LRGT S+EK
Sbjct: 125 DSRCVAYPL-DTIPDYFHWRQVEAWRNNLYSTTFWQLII-RGLTPQEAEERLRGTKSNEK 182

Query: 777 HELLFKDCKINYNNECELYKKGTIIIK 803
           HE+LF +  INYN E E  KKG  + +
Sbjct: 183 HEILFSEFGINYNREPEWQKKGVGVYR 209

Length = 249
>gnl|CDD|203016 pfam04446, Thg1, tRNAHis guanylyltransferase Back     alignment and domain information
>gnl|CDD|222741 pfam14413, Thg1C, Thg1 C terminal domain Back     alignment and domain information
>gnl|CDD|226508 COG4021, COG4021, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>gnl|CDD|203016 pfam04446, Thg1, tRNAHis guanylyltransferase Back     alignment and domain information
>gnl|CDD|222741 pfam14413, Thg1C, Thg1 C terminal domain Back     alignment and domain information
>gnl|CDD|222190 pfam13517, VCBS, Family description Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 848
KOG2721|consensus260 100.0
COG4021249 Uncharacterized conserved protein [Function unknow 100.0
KOG2721|consensus260 100.0
PF04446135 Thg1: tRNAHis guanylyltransferase; InterPro: IPR00 100.0
COG4021249 Uncharacterized conserved protein [Function unknow 100.0
PF14413120 Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A 100.0
PF04446135 Thg1: tRNAHis guanylyltransferase; InterPro: IPR00 99.92
PF14413120 Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A 99.84
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 97.2
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 96.67
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 96.62
cd00216488 PQQ_DH Dehydrogenases with pyrrolo-quinoline quino 96.55
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 96.45
cd00216488 PQQ_DH Dehydrogenases with pyrrolo-quinoline quino 96.35
TIGR03075527 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan 96.07
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 95.64
TIGR03075527 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan 94.59
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 94.14
TIGR03074764 PQQ_membr_DH membrane-bound PQQ-dependent dehydrog 93.85
PF1351761 VCBS: Repeat domain in Vibrio, Colwellia, Bradyrhi 93.29
TIGR03074764 PQQ_membr_DH membrane-bound PQQ-dependent dehydrog 91.93
smart0056433 PQQ beta-propeller repeat. Beta-propeller repeat o 90.25
PF0101138 PQQ: PQQ enzyme repeat family.; InterPro: IPR00237 90.25
COG1520370 FOG: WD40-like repeat [Function unknown] 85.21
KOG3637|consensus1030 83.87
COG1520370 FOG: WD40-like repeat [Function unknown] 80.63
>KOG2721|consensus Back     alignment and domain information 
Probab=100.00  E-value=4.6e-88  Score=677.40  Aligned_cols=243  Identities=52%  Similarity=0.957  Sum_probs=231.5

Q ss_pred             cccccccccCCCceEEEEecCCChhccccccCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEeeeeeEEEEEecCCccc
Q psy12259        600 MEFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICCAYGQSDEYSFIFSRNTNIY  679 (848)
Q Consensus       600 k~fE~~~~llp~~~iVVRiDGr~Fhkfs~~~~F~KP~D~r~l~lM~~aA~~vm~~f~~i~~AY~~SDEiSfvf~~~~~~f  679 (848)
                      |+||.+|++||.+|||||||||+|||||+.|+|+||||+++|++||+||.+||++|+||++|||+||||||||++++.+|
T Consensus         4 ksFE~~d~~lp~~~iVvRIDGr~FhrFs~~h~FeKPNDe~aLnLMnscA~~Vl~ef~DIv~AyG~SDEYSFV~kk~t~~f   83 (260)
T KOG2721|consen    4 KSFEVEDEVLPPCWIVVRIDGRDFHRFSKVHEFEKPNDETALNLMNSCASAVLEEFPDIVFAYGYSDEYSFVFKKSTELF   83 (260)
T ss_pred             hhhhcccccccceEEEEEEcCcchhhhhhhhcccCCChHHHHHHHHHHHHHHHHhccceEEEeccCcceeeeeccchHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhhhhhHhHHHhHHHhHHHHHh-ccccCCCCCccceEEEcCChhhHHHHHHHHHHHHHHhhcchhhhhHHHHhcC
Q psy12259        680 NRRADKIASVVCSLFTSSYGFYWDKFC-CKKLKYPPAFDSRVILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCG  758 (848)
Q Consensus       680 ~rR~~KL~S~~aS~fSs~f~~~w~~~f-~~~L~~pp~FD~Rvv~~Ps~~~v~dYl~WRQ~DchrNnl~nt~fw~Lv~~~G  758 (848)
                      +||.+||+|.+||+|||.|++.|++|| +++|.+||+||||||+||+.+.++|||+|||+|||+|||||||||+||+++|
T Consensus        84 kRr~sKi~s~v~SfF~s~YV~~W~~ffp~~~L~y~PsFdgrvV~yps~q~LkdYLaWRq~DcHinNlYnT~fWmLv~ksG  163 (260)
T KOG2721|consen   84 KRRASKILSLVASFFASVYVTKWKKFFPHLKLLYAPSFDGRVVSYPSVQVLKDYLAWRQVDCHINNLYNTCFWMLVKKSG  163 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCCCcEEecccHHHHHHHHHHHhhcccccchhhHHHHHHHHHhC
Confidence            999999999999999999999999999 6999999999999999999999999999999999999999999999999899


Q ss_pred             CCHHHHHHHhcCCChhHHHHHHhhhcCCCCCCcccccccceEEEEeeccC-C-------CCC----cccceeeeeccccc
Q psy12259        759 HSKQEAEKILRGTVSSEKHELLFKDCKINYNNECELYKKGTIIIKSLVPS-S-------TGS----PVCNTVYVPLNCDI  826 (848)
Q Consensus       759 ~s~~eA~~~L~G~~s~dknElLf~~~GINyn~~P~~~RkGs~i~r~~~~~-~-------~~~----~~~r~~i~~~h~di  826 (848)
                      +|+.||++.|+||.+++||||||++||||||++|++||+||++.|+++.. .       ++.    +..|+++.+.|+||
T Consensus       164 ~t~~qaq~~Lkgt~s~ekneilf~efginyn~~p~~~rkGs~l~rk~v~~~~~k~~~~~~~k~~~~~~~~~k~lp~~~~~  243 (260)
T KOG2721|consen  164 KTPSQAQEILKGTFSAEKNEILFSEFGINYNNEPEMFRKGSILIRKKVKGQEWKINTEIQGKKLFVTYTRTKPLPLHVDI  243 (260)
T ss_pred             CChHHHHHHHHhhhhhhhhhHHHHHhCcccCCchHHHhcccEEEEecCCcceeeechhcccceeeeeeccCcceeEEEEE
Confidence            99999999999999999999999999999999999999999999997731 1       111    12245788899999


Q ss_pred             CCccccccCCccccCC
Q psy12259        827 INDKFWNENPHILDSS  842 (848)
Q Consensus       827 i~d~fw~~~~~~l~~~  842 (848)
                      |+|+||.++|.++.++
T Consensus       244 i~d~f~~~~p~~~~~~  259 (260)
T KOG2721|consen  244 IGDDFWKEHPEILDED  259 (260)
T ss_pred             ecCcccccCchhhccC
Confidence            9999999999999875

>COG4021 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2721|consensus Back     alignment and domain information
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [] Back     alignment and domain information
>COG4021 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF14413 Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A Back     alignment and domain information
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [] Back     alignment and domain information
>PF14413 Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases Back     alignment and domain information
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family Back     alignment and domain information
>PF13517 VCBS: Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella; PDB: 2C25_A 2BWR_B 2C4D_A 2BWM_A Back     alignment and domain information
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family Back     alignment and domain information
>smart00564 PQQ beta-propeller repeat Back     alignment and domain information
>PF01011 PQQ: PQQ enzyme repeat family Back     alignment and domain information
>COG1520 FOG: WD40-like repeat [Function unknown] Back     alignment and domain information
>KOG3637|consensus Back     alignment and domain information
>COG1520 FOG: WD40-like repeat [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query848
3otb_A269 Crystal Structure Of Human Trnahis Guanylyltransfer 5e-72
>pdb|3OTB|A Chain A, Crystal Structure Of Human Trnahis Guanylyltransferase (Thg1) - Dgtp Complex Length = 269 Back     alignment and structure 
Iteration: 1

 Score =  269 bits (687), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 129/257 (50%), Positives = 168/257 (65%), Gaps = 16/257 (6%)
Query: 601 EFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICC 660
           +FE+ D CL +C++VVR+DG+ FH+F E H F KPND   L LM+K A  V+EE  DI  
Sbjct: 11  DFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQTVMEELEDIVI 70
Query: 661 AYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYW-DKFCCKKLKYPPAFDSR 719
           AYGQSDEYSF+F R TN + RRA K  + V S F SSY FYW D F  + L YPP FD R
Sbjct: 71  AYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQPLLYPPGFDGR 130
Query: 720 VILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHEL 779
           V++YP+ + L+DYLSWRQAD HINNLYNT FW L+Q+ G +  +A+  L+GT++++K+E+
Sbjct: 131 VVVYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQQSGLTPVQAQGRLQGTLAADKNEI 190
Query: 780 LFKDCKINYNNECELYKKGTIIIKSLVPSSTGSPV---------------CNTVYVPLNC 824
           LF +  INYNNE  +Y+KGT++I   V       +                 T  VPL+C
Sbjct: 191 LFSEFNINYNNELPMYRKGTVLIWQKVDEVMTKEIKLPTEMEGKKMAVTRTRTKPVPLHC 250
Query: 825 DIINDKFWNENPHILDS 841
           DII D FW E+P ILD 
Sbjct: 251 DIIGDAFWKEHPEILDE 267

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query848
3otd_A269 TRNA(His) guanylyltransferase; polymerase-like PAL 1e-102
3otd_A269 TRNA(His) guanylyltransferase; polymerase-like PAL 3e-42
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-05
2bwr_A401 Psathyrella velutina lectin; N-acetyl-glucosamine; 2e-04
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 4e-04
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Length = 269 Back     alignment and structure
 Score =  316 bits (811), Expect = e-102
 Identities = 127/256 (49%), Positives = 166/256 (64%), Gaps = 16/256 (6%)

Query: 601 EFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIEEFNDICC 660
           +FE+ D CL +C++VVR+DG+ FH+F E H F KPND   L LM+K A  V+EE  DI  
Sbjct: 11  DFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQTVMEELEDIVI 70

Query: 661 AYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDK-FCCKKLKYPPAFDSR 719
           AYGQSDEYSF+F R TN + RRA K  + V S F SSY FYW   F  + L YPP FD R
Sbjct: 71  AYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQPLLYPPGFDGR 130

Query: 720 VILYPTVRNLRDYLSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHEL 779
           V++YP+ + L+DYLSWRQAD HINNLYNT FW L+Q+ G +  +A+  L+GT++++K+E+
Sbjct: 131 VVVYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQQSGLTPVQAQGRLQGTLAADKNEI 190

Query: 780 LFKDCKINYNNECELYKKGTIIIKSLVPSSTGSPVCNTVY---------------VPLNC 824
           LF +  INYNNE  +Y+KGT++I   V       +                    VPL+C
Sbjct: 191 LFSEFNINYNNELPMYRKGTVLIWQKVDEVMTKEIKLPTEMEGKKMAVTRTRTKPVPLHC 250

Query: 825 DIINDKFWNENPHILD 840
           DII D FW E+P ILD
Sbjct: 251 DIIGDAFWKEHPEILD 266
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Length = 269 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2bwr_A Psathyrella velutina lectin; N-acetyl-glucosamine; HET: MES; 1.5A {Psathyrella velutina} PDB: 2bwm_A* 2c25_A* 2c4d_A* Length = 401 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query848
3otd_A269 TRNA(His) guanylyltransferase; polymerase-like PAL 100.0
3otd_A269 TRNA(His) guanylyltransferase; polymerase-like PAL 100.0
2zux_A591 YESW protein; beta-propeller, lyase, rhamnose comp 96.39
2zuy_A620 YESX protein; beta-propeller, lyase; 1.65A {Bacill 96.38
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 96.21
1w6s_A599 Methanol dehydrogenase subunit 1; anisotropic, ele 95.15
1kv9_A668 Type II quinohemoprotein alcohol dehydrogenase; el 95.15
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 95.11
1yiq_A689 Quinohemoprotein alcohol dehydrogenase; electron t 94.99
1flg_A582 Protein (quinoprotein ethanol dehydrogenase); supe 94.91
1kv9_A668 Type II quinohemoprotein alcohol dehydrogenase; el 94.89
1flg_A582 Protein (quinoprotein ethanol dehydrogenase); supe 94.75
2ad6_A571 Methanol dehydrogenase subunit 1; PQQ configuratio 94.74
2zux_A591 YESW protein; beta-propeller, lyase, rhamnose comp 94.55
1kb0_A677 Quinohemoprotein alcohol dehydrogenase; beta-prope 94.54
1w6s_A599 Methanol dehydrogenase subunit 1; anisotropic, ele 94.4
1yiq_A689 Quinohemoprotein alcohol dehydrogenase; electron t 94.14
2ad6_A571 Methanol dehydrogenase subunit 1; PQQ configuratio 94.06
2zuy_A620 YESX protein; beta-propeller, lyase; 1.65A {Bacill 93.68
1kb0_A677 Quinohemoprotein alcohol dehydrogenase; beta-prope 93.59
2hz6_A369 Endoplasmic reticulum to nucleus signalling 1 isof 90.64
2hz6_A369 Endoplasmic reticulum to nucleus signalling 1 isof 90.63
2be1_A339 Serine/threonine-protein kinase/endoribonuclease; 90.18
2be1_A339 Serine/threonine-protein kinase/endoribonuclease; 89.89
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 89.81
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 87.28
3hx6_A570 Type 4 fimbrial biogenesis protein PILY1; beta pro 82.36
3k6s_A1095 Integrin alpha-X; cell receptor, adhesion molecule 80.42
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Back     alignment and structure
Probab=100.00  E-value=1.5e-95  Score=760.87  Aligned_cols=252  Identities=52%  Similarity=0.960  Sum_probs=235.0

Q ss_pred             cccccccccccccCCCCCCccccccccccccccccCCCceEEEEecCCChhccccccCCCCCCCHHHHHHHHHHHHHHHH
Q psy12259        574 SRYSGFDYIDWLNFSHTPKVTTCSCFMEFESHDRCLPNCFIVVRVDGKGFHKFTEAHGFDKPNDRSGLWLMSKAAACVIE  653 (848)
Q Consensus       574 ma~sk~Eyv~~in~n~~p~~~~c~~~k~fE~~~~llp~~~iVVRiDGr~Fhkfs~~~~F~KP~D~r~l~lM~~aA~~vm~  653 (848)
                      ||+||||||                 |.||.+|+|+|++|||||||||+|||||+.|+|+||||+|+|+||++||++||+
T Consensus         1 ma~sk~eyv-----------------r~fE~~d~llp~~~iVVRiDGr~F~kfs~~~~F~KPnD~r~l~lM~~aA~~lm~   63 (269)
T 3otd_A            1 MAKSKFEYV-----------------RDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQTVME   63 (269)
T ss_dssp             --CCSSGGG-----------------GGGCCCCBCCTTSEEEEEEEETTHHHHHHHTTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCccchhh-----------------hhhccccccCCCCeEEEEEeCCccchhhhhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence            899999999                 999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCeEEEEeeeeeEEEEEecCCcccccccchhhhhhHhHHHhHHHhHHHHHh-ccccCCCCCccceEEEcCChhhHHHH
Q psy12259        654 EFNDICCAYGQSDEYSFIFSRNTNIYNRRADKIASVVCSLFTSSYGFYWDKFC-CKKLKYPPAFDSRVILYPTVRNLRDY  732 (848)
Q Consensus       654 ~f~~i~~AY~~SDEiSfvf~~~~~~f~rR~~KL~S~~aS~fSs~f~~~w~~~f-~~~L~~pp~FD~Rvv~~Ps~~~v~dY  732 (848)
                      +|++|++||||||||||||++++.+|+||++||+|++||+|||+|+++|+++| +++|.+||+||||||+||+.++|+||
T Consensus        64 ~~~~i~~aYg~SDEiSfvf~~~~~~f~rR~~KL~S~~aS~fSs~y~~~w~~~fp~~~L~~pp~FD~Rvv~~P~~~~v~dY  143 (269)
T 3otd_A           64 ELEDIVIAYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQPLLYPPGFDGRVVVYPSNQTLKDY  143 (269)
T ss_dssp             HSSSEEEEEEETTEEEEEECTTCCTTTTBHHHHHHHHHHHHHHHHHHTHHHHCSSSCCCSCCCEEEEEEEESSHHHHHHH
T ss_pred             HcCCeEEEEecCcEEEEEECCCChhhcchhHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCceeEEeCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999 89999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcchhhhhHHHHhcCCCHHHHHHHhcCCChhHHHHHHhhhcCCCCCCcccccccceEEEEeeccCC---
Q psy12259        733 LSWRQADAHINNLYNTAFWGLVQKCGHSKQEAEKILRGTVSSEKHELLFKDCKINYNNECELYKKGTIIIKSLVPSS---  809 (848)
Q Consensus       733 l~WRQ~DchrNnl~nt~fw~Lv~~~G~s~~eA~~~L~G~~s~dknElLf~~~GINyn~~P~~~RkGs~i~r~~~~~~---  809 (848)
                      |+|||+|||||||||||||+|||++|+|++||+++|+||.++|||||||++||||||++|+||||||+|+|+.++..   
T Consensus       144 l~WRQ~D~h~Nnlynt~fw~Lv~~~G~s~~eA~~~L~Gt~s~dknEiLf~~fGINyn~~P~~~rkGs~i~r~~~~~~~~~  223 (269)
T 3otd_A          144 LSWRQADCHINNLYNTVFWALIQQSGLTPVQAQGRLQGTLAADKNEILFSEFNINYNNELPMYRKGTVLIWQKVDEVMTK  223 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCGGGSCHHHHHCEEEEEC--------
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhcCCCHHHHHHHHcCCcHHHHHHHHHHHcCCChhhCcHhHcceEEEEEeeeeccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987542   


Q ss_pred             ----------C--CCcccceeeeecccccCCccccccCCccccCC
Q psy12259        810 ----------T--GSPVCNTVYVPLNCDIINDKFWNENPHILDSS  842 (848)
Q Consensus       810 ----------~--~~~~~r~~i~~~h~dii~d~fw~~~~~~l~~~  842 (848)
                                +  ..++.|++|+++|+|||+|+||++||+||+++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~~~h~dii~d~fw~~~~~~l~~~  268 (269)
T 3otd_A          224 EIKLPTEMEGKKMAVTRTRTKPVPLHCDIIGDAFWKEHPEILDED  268 (269)
T ss_dssp             -------------------CCEEEECCCCSSHHHHHHCTHHHHSC
T ss_pred             ccccccccccccccccccccceeEEecCCcCchhhhhCchhccCC
Confidence                      1  12234568999999999999999999999765
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Back     alignment and structure
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A* Back     alignment and structure
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis} Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* Back     alignment and structure
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} Back     alignment and structure
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 Back     alignment and structure
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 Back     alignment and structure
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 Back     alignment and structure
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* Back     alignment and structure
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A* Back     alignment and structure
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 Back     alignment and structure
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* Back     alignment and structure
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} Back     alignment and structure
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* Back     alignment and structure
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis} Back     alignment and structure
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 Back     alignment and structure
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} Back     alignment and structure
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} Back     alignment and structure
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} Back     alignment and structure
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa} Back     alignment and structure
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query848
d2ad6a1571 Methanol dehydrogenase, heavy chain {Methylophilus 96.18
d1kv9a2560 Quinoprotein alcohol dehydrogenase, N-terminal dom 95.23
d1w6sa_596 Methanol dehydrogenase, heavy chain {Methylobacter 95.04
d1kb0a2573 Quinoprotein alcohol dehydrogenase, N-terminal dom 94.38
d1kv9a2560 Quinoprotein alcohol dehydrogenase, N-terminal dom 93.68
d1flga_582 Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax 93.37
d1w6sa_596 Methanol dehydrogenase, heavy chain {Methylobacter 92.6
d1flga_582 Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax 91.57
d1kb0a2573 Quinoprotein alcohol dehydrogenase, N-terminal dom 90.18
d2ad6a1571 Methanol dehydrogenase, heavy chain {Methylophilus 90.06
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.18  E-value=0.0092  Score=65.77  Aligned_cols=66  Identities=17%  Similarity=0.051  Sum_probs=49.4

Q ss_pred             ceEEEEeCCCcceeeeeccCCCCCcc--cccceeccCCCCCCccceEEEeecCCceeEEEEEeCCCCccc
Q psy12259        104 GYLAVLSQATGNLLWRKTNNGYKDGK--MKFPLIVDDLTGDGVNDLVLISYMGPSKYQLALLSGSNGVQI  171 (848)
Q Consensus       104 g~L~AIn~~TG~~lW~~~~~~~~~~~--~~~P~lvPDlDgDgV~DLLv~t~~~~~~~~l~LiSGkTG~~I  171 (848)
                      ..+.|+|..|||.+|++.........  .-.|.+++|+..||-..-++++...  .+.+.++..+||+.|
T Consensus       272 ~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k--~G~l~vlDr~tG~~i  339 (571)
T d2ad6a1         272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDR--NGILYTLNRENGNLI  339 (571)
T ss_dssp             TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECT--TSEEEEEETTTCCEE
T ss_pred             cceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccc--cceEEEEecCCCcEe
Confidence            56789999999999998755333233  3466678889888887655555443  288999999999987
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} Back     information, alignment and structure
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} Back     information, alignment and structure
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure