Psyllid ID: psy12282

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFEVPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILKSHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVLFTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFTGRDAPTVIT
cccccccccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHcccccEEEcccccEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccEEEEccccEEEEEEcccccccccccccccccccccccccccEEEccccccEEEEccccccccccccccccccccEEEEEEccEEEEEEEccccccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHcccccccccccccccc
EEEEHHHcEEcHHHHHHHHHHcHHHcHHHHHHccccEEEEcccccHHHHHHHHHcccEEEEccccHHHHHHHHcccccEEEEcccEEEEcccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcEEEEEEEEEEEEEHHHHHHHHHHHHHHHccccccccEEEccccEEEEEEEEEccEEccccccEEcccccccccccccEEEccccEEEEEEEEEccEEccccccEEccccEEEEEccccEEEEEEEEccccEEEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHcHHHHHccccccEEc
mvlgkkaffvnpsdSLAVLAAHLdsipyfkktgvkgyarsmptgaAVDRVAKANNkelfevptgwkyfgnlmdagrlslcgeesfgtgsdhirekDGIWAVLAWLSVVEHTGKPVEEILKSHWKQYgrnyftrydyencsaapcnQMMDELEkkvsapefkgvtlsaegrsftveagdnfeytdpidgsvakkqkvsapefkgvtlsaegrsftveagdnfeytdpidgsvakkqGVRVLFTDGSRLiyrlsgtgssgaTVRLYVESyvpatgdieADAQVALKPLVQVALELsklpqftgrdaptvit
mvlgkkaffvnpSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFEVPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILKSHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIdgsvakkqkvsapefkgvtlsaegrsFTVEAGDnfeytdpidgsvakkqgVRVLFTdgsrliyrlsgtgssgatvRLYVESYVPATGDIEADAQVALKPLVQVALelsklpqftgrdaptvit
MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFEVPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILKSHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVLFTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFTGRDAPTVIT
******AFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFEVPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILKSHWKQYGRNYFTRYDYENCSAAPCNQ**************************TV*****FEY*****************************SFTVEAGDNFEYTDPIDGSVAKKQGVRVLFTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKL*************
MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFEVPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILKSHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVLFTDGSRLIYRLSGTGSSGATVRLYVESYV***********VALKPLVQVALELSKLPQFTGRDAPTVI*
MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFEVPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILKSHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVLFTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFTG********
MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFEVPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILKSHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVLFTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFTGRDAPTVIT
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFEVPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILKSHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVLFTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFTGRDAPTVIT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query309 2.2.26 [Sep-21-2011]
Q9VUY9560 Phosphoglucomutase OS=Dro yes N/A 0.860 0.475 0.576 1e-104
Q7KHA1560 Phosphoglucomutase OS=Dro N/A N/A 0.860 0.475 0.576 1e-104
Q4R5E4562 Phosphoglucomutase-1 OS=M N/A N/A 0.867 0.476 0.537 5e-95
P36871562 Phosphoglucomutase-1 OS=H yes N/A 0.867 0.476 0.533 1e-94
Q9D0F9562 Phosphoglucomutase-1 OS=M yes N/A 0.867 0.476 0.533 3e-94
Q08DP0562 Phosphoglucomutase-1 OS=B yes N/A 0.867 0.476 0.537 1e-93
P38652562 Phosphoglucomutase-1 OS=R yes N/A 0.867 0.476 0.530 5e-93
P00949562 Phosphoglucomutase-1 OS=O yes N/A 0.867 0.476 0.533 6e-93
Q9SM59626 Phosphoglucomutase, chlor N/A N/A 0.834 0.412 0.503 1e-82
Q9SCY0623 Phosphoglucomutase, chlor yes N/A 0.844 0.418 0.498 2e-81
>sp|Q9VUY9|PGM_DROME Phosphoglucomutase OS=Drosophila melanogaster GN=Pgm PE=1 SV=1 Back     alignment and function desciption
 Score =  378 bits (970), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 178/309 (57%), Positives = 225/309 (72%), Gaps = 43/309 (13%)

Query: 1   MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFE 60
           M++G KAFFV PSDSLAV+A +L++IPYF+K GV+G+ARSMPT +AVD V +   KE+FE
Sbjct: 295 MIIGSKAFFVTPSDSLAVIAHYLEAIPYFQKNGVQGFARSMPTASAVDLVGRKLGKEVFE 354

Query: 61  VPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILK 120
           VPTGWKYFGNLMDAGRL LCGEESFGTGS+HIREKDGIWAVLAW+SV++HTGK +E+ILK
Sbjct: 355 VPTGWKYFGNLMDAGRLCLCGEESFGTGSNHIREKDGIWAVLAWISVMQHTGKGIEDILK 414

Query: 121 SHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNF 180
            HW  YGRNYFTRYDYE C++ PCN+M+  +EK ++APEF G + S+ G+++ V+  DNF
Sbjct: 415 QHWSVYGRNYFTRYDYEECASDPCNEMVATMEKTITAPEFVGKSYSSGGKTYKVKEADNF 474

Query: 181 EYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVL 240
            YTDP+D SVA                                          KQG+R++
Sbjct: 475 SYTDPVDKSVA-----------------------------------------TKQGLRIV 493

Query: 241 FTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFT 300
           F DGSR++ RLSGTGSSGATVRLY++SY     ++   A V LKPL+ +ALE+S+LP+FT
Sbjct: 494 FEDGSRIVVRLSGTGSSGATVRLYIDSY--EKENVLGQASVMLKPLIDIALEISQLPKFT 551

Query: 301 GRDAPTVIT 309
           GR+APTVIT
Sbjct: 552 GRNAPTVIT 560
This enzyme participates in both the breakdown and synthesis of glucose.
Drosophila melanogaster (taxid: 7227)
EC: 5EC: .EC: 4EC: .EC: 2EC: .EC: 2
>sp|Q7KHA1|PGM_DROSI Phosphoglucomutase OS=Drosophila simulans GN=Pgm PE=3 SV=1 Back     alignment and function description
>sp|Q4R5E4|PGM1_MACFA Phosphoglucomutase-1 OS=Macaca fascicularis GN=PGM1 PE=2 SV=3 Back     alignment and function description
>sp|P36871|PGM1_HUMAN Phosphoglucomutase-1 OS=Homo sapiens GN=PGM1 PE=1 SV=3 Back     alignment and function description
>sp|Q9D0F9|PGM1_MOUSE Phosphoglucomutase-1 OS=Mus musculus GN=Pgm1 PE=1 SV=4 Back     alignment and function description
>sp|Q08DP0|PGM1_BOVIN Phosphoglucomutase-1 OS=Bos taurus GN=PGM1 PE=2 SV=1 Back     alignment and function description
>sp|P38652|PGM1_RAT Phosphoglucomutase-1 OS=Rattus norvegicus GN=Pgm1 PE=1 SV=2 Back     alignment and function description
>sp|P00949|PGM1_RABIT Phosphoglucomutase-1 OS=Oryctolagus cuniculus GN=PGM1 PE=1 SV=2 Back     alignment and function description
>sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplastic OS=Pisum sativum GN=PGMP PE=2 SV=1 Back     alignment and function description
>sp|Q9SCY0|PGMP_ARATH Phosphoglucomutase, chloroplastic OS=Arabidopsis thaliana GN=PGMP PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
405950592 593 Phosphoglucomutase-1 [Crassostrea gigas] 0.983 0.512 0.611 1e-111
193688160 560 PREDICTED: phosphoglucomutase-like [Acyr 0.867 0.478 0.621 1e-107
61608451 561 phosphoglucomutase 1 [Aedes aegypti] 0.860 0.474 0.614 1e-106
223036838 560 phosphoglucomutase [Locusta migratoria] 0.860 0.475 0.618 1e-105
157124898 561 phosphoglucomutase [Aedes aegypti] gi|10 0.860 0.474 0.611 1e-105
350423965 564 PREDICTED: phosphoglucomutase-like [Bomb 0.867 0.475 0.605 1e-105
170038788 561 phosphoglucomutase [Culex quinquefasciat 0.860 0.474 0.605 1e-104
340726378 564 PREDICTED: phosphoglucomutase-like [Bomb 0.867 0.475 0.601 1e-104
58387888 561 AGAP005860-PA [Anopheles gambiae str. PE 0.860 0.474 0.598 1e-104
195135076 560 GI16688 [Drosophila mojavensis] gi|19391 0.860 0.475 0.582 1e-103
>gi|405950592|gb|EKC18570.1| Phosphoglucomutase-1 [Crassostrea gigas] Back     alignment and taxonomy information
 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/309 (61%), Positives = 235/309 (76%), Gaps = 5/309 (1%)

Query: 1   MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFE 60
           M+LGK AFFV PSDSLAVLA +L+ IPYFK+TGVKGYARSMPT  AVDRVAKA N+  FE
Sbjct: 290 MILGKNAFFVTPSDSLAVLAHYLECIPYFKETGVKGYARSMPTSGAVDRVAKAKNQTCFE 349

Query: 61  VPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILK 120
           VPTGWK+FGNLMDAGRLSLCGEESFGTGSDHIREKDG+WAVLAWLSV+ +    VEE +K
Sbjct: 350 VPTGWKFFGNLMDAGRLSLCGEESFGTGSDHIREKDGLWAVLAWLSVLANQNCSVEECIK 409

Query: 121 SHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNF 180
            HW+ YGRN++TRYDYENC + P N+MM  L   V+     G   ++  +S+T+   DNF
Sbjct: 410 RHWQTYGRNFYTRYDYENCESEPANKMMANLNAYVADQSNIGKVFTSGDKSYTLAKADNF 469

Query: 181 EYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVL 240
            YTDP+D S++K Q        G   ++  +S+T+   DNF YTDP+D S++K QG+R++
Sbjct: 470 SYTDPVDHSISKNQSNI-----GKVFTSGDKSYTLAKADNFSYTDPVDHSISKNQGIRLI 524

Query: 241 FTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFT 300
           F+D SR+I+RLSGTGSSGAT+RLY+E Y       E D QV L+PL+ +AL+LS+LP+ T
Sbjct: 525 FSDDSRIIFRLSGTGSSGATIRLYLEGYESDPAKYEMDPQVVLRPLIDIALKLSQLPELT 584

Query: 301 GRDAPTVIT 309
           GRDAPTVIT
Sbjct: 585 GRDAPTVIT 593

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota
>gi|193688160|ref|XP_001948460.1| PREDICTED: phosphoglucomutase-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|61608451|gb|AAX47078.1| phosphoglucomutase 1 [Aedes aegypti] Back     alignment and taxonomy information
>gi|223036838|gb|ACM78949.1| phosphoglucomutase [Locusta migratoria] Back     alignment and taxonomy information
>gi|157124898|ref|XP_001660577.1| phosphoglucomutase [Aedes aegypti] gi|108873817|gb|EAT38042.1| AAEL010037-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|350423965|ref|XP_003493647.1| PREDICTED: phosphoglucomutase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|170038788|ref|XP_001847230.1| phosphoglucomutase [Culex quinquefasciatus] gi|167882476|gb|EDS45859.1| phosphoglucomutase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|340726378|ref|XP_003401536.1| PREDICTED: phosphoglucomutase-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|58387888|ref|XP_315885.2| AGAP005860-PA [Anopheles gambiae str. PEST] gi|55238676|gb|EAA11635.2| AGAP005860-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|195135076|ref|XP_002011961.1| GI16688 [Drosophila mojavensis] gi|193918225|gb|EDW17092.1| GI16688 [Drosophila mojavensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
UNIPROTKB|A8J8Z1600 GPM1a "Phosphoglucomutase" [Ch 0.605 0.311 0.573 1.3e-88
TAIR|locus:2165351623 PGM "phosphoglucomutase" [Arab 0.611 0.303 0.558 4.4e-88
UNIPROTKB|Q33AE4609 Os10g0189100 "cDNA clone:J0130 0.605 0.307 0.553 1.9e-87
UNIPROTKB|Q7NE97544 gll3983 "Phosphoglucomutase" [ 0.608 0.345 0.510 2.5e-77
UNIPROTKB|Q22UZ5587 TTHERM_00577080 "Phosphoglucom 0.592 0.311 0.521 1.2e-75
FB|FBgn0003076560 Pgm "phosphoglucose mutase" [D 0.627 0.346 0.680 1.2e-74
UNIPROTKB|Q7KHA1560 Pgm "Phosphoglucomutase" [Dros 0.627 0.346 0.680 1.2e-74
UNIPROTKB|P36871562 PGM1 "Phosphoglucomutase-1" [H 0.841 0.462 0.520 5.1e-67
MGI|MGI:97565562 Pgm2 "phosphoglucomutase 2" [M 0.841 0.462 0.520 6.5e-67
UNIPROTKB|Q6NVJ0562 pgm1 "Phosphoglucomutase 1" [X 0.627 0.345 0.634 8.2e-67
UNIPROTKB|A8J8Z1 GPM1a "Phosphoglucomutase" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
 Score = 566 (204.3 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
 Identities = 117/204 (57%), Positives = 144/204 (70%)

Query:     1 MVLGKKAFFVNPSDSLAVLAAHLDS-IPYFKKTGVKGYARSMPTGAAVDRVAKANNKELF 59
             MVLG K FFVNPSDS+A++AA+  + IPYFK  G+KG ARSMPT  A+DRVA A N   F
Sbjct:   330 MVLGHK-FFVNPSDSVALIAANAQACIPYFKG-GLKGVARSMPTSGALDRVAAALNVPFF 387

Query:    60 EVPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEE-- 117
             E PTGWK+FGNLMDAG+ S+CGEESFGTG DHIREKDG++AVLAWLS++ +  K V E  
Sbjct:   388 ETPTGWKFFGNLMDAGKCSVCGEESFGTGGDHIREKDGLFAVLAWLSILAYRNKDVPEGG 447

Query:   118 -------ILKSHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGR 170
                    +   HWKQYGRN+F+RYDYE C++A  ++M+  L + V A    G  +     
Sbjct:   448 KLVTVADVCTEHWKQYGRNFFSRYDYEECASADADKMVAHL-RDVIAKSKAGDKIG---- 502

Query:   171 SFTVEAGDNFEYTDPIDGSVAKKQ 194
              FT+   D+FEYTDPIDGS A KQ
Sbjct:   503 EFTLATADDFEYTDPIDGSKASKQ 526
GO:0004614 "phosphoglucomutase activity" evidence=IBA
GO:0005829 "cytosol" evidence=IBA
GO:0005992 "trehalose biosynthetic process" evidence=IBA
GO:0009570 "chloroplast stroma" evidence=IBA
GO:0009590 "detection of gravity" evidence=IBA
GO:0010319 "stromule" evidence=IBA
GO:0019252 "starch biosynthetic process" evidence=IBA
GO:0019388 "galactose catabolic process" evidence=IBA
GO:0005978 "glycogen biosynthetic process" evidence=IBA
TAIR|locus:2165351 PGM "phosphoglucomutase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q33AE4 Os10g0189100 "cDNA clone:J013000K21, full insert sequence" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q7NE97 gll3983 "Phosphoglucomutase" [Gloeobacter violaceus PCC 7421 (taxid:251221)] Back     alignment and assigned GO terms
UNIPROTKB|Q22UZ5 TTHERM_00577080 "Phosphoglucomutase/phosphomannomutase, C-terminal domain containing protein" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
FB|FBgn0003076 Pgm "phosphoglucose mutase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q7KHA1 Pgm "Phosphoglucomutase" [Drosophila simulans (taxid:7240)] Back     alignment and assigned GO terms
UNIPROTKB|P36871 PGM1 "Phosphoglucomutase-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:97565 Pgm2 "phosphoglucomutase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q6NVJ0 pgm1 "Phosphoglucomutase 1" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9VUY9PGM_DROME5, ., 4, ., 2, ., 20.57600.86080.475yesN/A
P00949PGM1_RABIT5, ., 4, ., 2, ., 20.53390.86730.4768yesN/A
P36871PGM1_HUMAN5, ., 4, ., 2, ., 20.53390.86730.4768yesN/A
P38652PGM1_RAT5, ., 4, ., 2, ., 20.53070.86730.4768yesN/A
Q08DP0PGM1_BOVIN5, ., 4, ., 2, ., 20.53720.86730.4768yesN/A
Q9D0F9PGM1_MOUSE5, ., 4, ., 2, ., 20.53390.86730.4768yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer5.4.2.2LOW CONFIDENCE prediction!
3rd Layer5.4.2LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
cd03085548 cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyz 1e-169
PLN02307579 PLN02307, PLN02307, phosphoglucomutase 1e-142
PRK07564543 PRK07564, PRK07564, phosphoglucomutase; Validated 6e-73
COG0033524 COG0033, Pgm, Phosphoglucomutase [Carbohydrate tra 3e-67
pfam02880112 pfam02880, PGM_PMM_III, Phosphoglucomutase/phospho 3e-30
cd03084355 cd03084, phosphohexomutase, The alpha-D-phosphohex 1e-21
cd05800461 cd05800, PGM_like2, This PGM-like (phosphoglucomut 5e-20
COG1109464 COG1109, {ManB}, Phosphomannomutase [Carbohydrate 6e-09
cd05801522 cd05801, PGM_like3, This bacterial PGM-like (phosp 5e-08
cd05799487 cd05799, PGM2, This CD includes PGM2 (phosphogluco 9e-08
TIGR01132544 TIGR01132, pgm, phosphoglucomutase, alpha-D-glucos 9e-07
pfam0040871 pfam00408, PGM_PMM_IV, Phosphoglucomutase/phosphom 4e-06
>gnl|CDD|100087 cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes Back     alignment and domain information 
 Score =  479 bits (1235), Expect = e-169
 Identities = 168/309 (54%), Positives = 205/309 (66%), Gaps = 45/309 (14%)

Query: 1   MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFE 60
           M+LGK  FFV PSDS+AV+AA+   IPYF K G+KG ARSMPT  A+DRVAK     LFE
Sbjct: 285 MILGK-GFFVTPSDSVAVIAANAKLIPYFYKGGLKGVARSMPTSGALDRVAKKLGIPLFE 343

Query: 61  VPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILK 120
            PTGWK+FGNLMDAG+LSLCGEESFGTGSDHIREKDG+WAVLAWLS++ H    VE+I+K
Sbjct: 344 TPTGWKFFGNLMDAGKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILAHRNVSVEDIVK 403

Query: 121 SHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNF 180
            HW++YGRN++TRYDYE   +   N+MMD L   VS     G +                
Sbjct: 404 EHWQKYGRNFYTRYDYEEVDSEAANKMMDHLRALVSDLPGVGKSGDKG------------ 451

Query: 181 EYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVL 240
                                           + V   D+F YTDP+DGSV+KKQG+R++
Sbjct: 452 --------------------------------YKVAKADDFSYTDPVDGSVSKKQGLRII 479

Query: 241 FTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFT 300
           F DGSR+I+RLSGTGSSGAT+RLY+ESY         DAQVALKPL+++AL+LSKL +FT
Sbjct: 480 FEDGSRIIFRLSGTGSSGATIRLYIESYEKDPSKYGLDAQVALKPLIEIALKLSKLKEFT 539

Query: 301 GRDAPTVIT 309
           GR+ PTVIT
Sbjct: 540 GREEPTVIT 548

In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model. Length = 548
>gnl|CDD|177942 PLN02307, PLN02307, phosphoglucomutase Back     alignment and domain information
>gnl|CDD|236050 PRK07564, PRK07564, phosphoglucomutase; Validated Back     alignment and domain information
>gnl|CDD|223111 COG0033, Pgm, Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|217265 pfam02880, PGM_PMM_III, Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Back     alignment and domain information
>gnl|CDD|100086 cd03084, phosphohexomutase, The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>gnl|CDD|100093 cd05800, PGM_like2, This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>gnl|CDD|224034 COG1109, {ManB}, Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|100094 cd05801, PGM_like3, This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>gnl|CDD|100092 cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1) Back     alignment and domain information
>gnl|CDD|188111 TIGR01132, pgm, phosphoglucomutase, alpha-D-glucose phosphate-specific Back     alignment and domain information
>gnl|CDD|215905 pfam00408, PGM_PMM_IV, Phosphoglucomutase/phosphomannomutase, C-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 309
KOG0625|consensus558 100.0
cd03085548 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bid 100.0
PLN02307579 phosphoglucomutase 100.0
PTZ00150584 phosphoglucomutase-2-like protein; Provisional 100.0
cd05800461 PGM_like2 This PGM-like (phosphoglucomutase-like) 100.0
cd05801522 PGM_like3 This bacterial PGM-like (phosphoglucomut 100.0
cd03089443 PMM_PGM The phosphomannomutase/phosphoglucomutase 100.0
PRK07564543 phosphoglucomutase; Validated 100.0
cd05805441 MPG1_transferase GTP-mannose-1-phosphate guanyltra 100.0
cd05803445 PGM_like4 This PGM-like (phosphoglucomutase-like) 100.0
TIGR01132543 pgm phosphoglucomutase, alpha-D-glucose phosphate- 100.0
PRK14321449 glmM phosphoglucosamine mutase; Provisional 100.0
PRK09542445 manB phosphomannomutase/phosphoglucomutase; Review 100.0
cd03087439 PGM_like1 This archaeal PGM-like (phosphoglucomuta 100.0
PRK15414456 phosphomannomutase CpsG; Provisional 100.0
cd05799487 PGM2 This CD includes PGM2 (phosphoglucomutase 2) 100.0
PLN02371583 phosphoglucosamine mutase family protein 100.0
COG1109464 {ManB} Phosphomannomutase [Carbohydrate transport 100.0
cd03088459 ManB ManB is a bacterial phosphomannomutase (PMM) 100.0
PRK14324446 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14317465 glmM phosphoglucosamine mutase; Provisional 100.0
PRK10887443 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14315448 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14322429 glmM phosphoglucosamine mutase; Provisional 100.0
COG0033524 Pgm Phosphoglucomutase [Carbohydrate transport and 100.0
PRK14314450 glmM phosphoglucosamine mutase; Provisional 99.98
KOG1220|consensus607 99.97
TIGR01455443 glmM phosphoglucosamine mutase. This model describ 99.97
PRK14323440 glmM phosphoglucosamine mutase; Provisional 99.97
PRK14316448 glmM phosphoglucosamine mutase; Provisional 99.97
cd05802434 GlmM GlmM is a bacterial phosphoglucosamine mutase 99.97
PRK14320443 glmM phosphoglucosamine mutase; Provisional 99.97
PRK14319430 glmM phosphoglucosamine mutase; Provisional 99.97
PRK14318448 glmM phosphoglucosamine mutase; Provisional 99.97
cd03084355 phosphohexomutase The alpha-D-phosphohexomutase su 99.97
cd03086513 PGM3 PGM3 (phosphoglucomutase 3), also known as PA 99.96
PF02880113 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase 99.94
PTZ00302585 N-acetylglucosamine-phosphate mutase; Provisional 99.9
PLN02895562 phosphoacetylglucosamine mutase 99.9
PF0040873 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, 99.25
KOG2537|consensus539 98.25
>KOG0625|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.9e-53  Score=409.34  Aligned_cols=267  Identities=64%  Similarity=1.133  Sum_probs=255.9

Q ss_pred             CeecCCCeeeCcchHHHHHHHHHhcCccccccCcceEEEeecchHHHHHHHHHCCCeEEEEecchHHHHHHHHhCCceEE
Q psy12282          1 MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFEVPTGWKYFGNLMDAGRLSLC   80 (309)
Q Consensus         1 ~~vd~~g~~~~gd~l~aLla~~lle~~~~~~~g~~~vv~tv~SS~~l~~ia~~~g~~~~~t~tGfk~i~~~m~~~~~~~g   80 (309)
                      |+++.+|.|++|.+..|++|+++...|+|++.|..|+++++.||.++|++|++.|..+.|||||||+++|+|++++..+|
T Consensus       291 MIlG~~~fFVtPsDSvAiIA~na~~IPYF~~~Gv~GfARSmPTs~AlDrVak~~gl~~yEvPTGWKfF~nLmDAgklsiC  370 (558)
T KOG0625|consen  291 MILGKNGFFVTPSDSVAIIAANAEAIPYFRKQGVKGFARSMPTSGALDRVAKKLGLPVYEVPTGWKFFGNLMDAGKLSIC  370 (558)
T ss_pred             eeeccCceeeccchhHHHHHhcchhcchhhhcCcchhhhcCCchhHHHHHHHHcCCceEEcCchHHHHHhhhcccceeec
Confidence            68899999999999999999999889999888888899999999999999999999999999999999999999999999


Q ss_pred             EccCCCcCCCCCCCCcHHHHHHHHHHHHHhcCCC-HHHHHHHHHhhhCcceeeeEEeecCChhhHHHHHHHHHhcCCCCC
Q psy12282         81 GEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKP-VEEILKSHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPE  159 (309)
Q Consensus        81 gEeSgG~~~~~~~dkDGi~aal~~lella~~g~~-L~ell~~l~~~yG~~~~~~~~~~~~~~~~~~~im~~Lr~~~~~~~  159 (309)
                      ||||.|.+++|+|+|||+||.|.|+.+|+++..+ +.++++++|.+||++++.|++|+.|+.+..+++|+.|++... ..
T Consensus       371 GEESFGTGSdHIREKDGiWAvlaWlsIlA~~k~~~vedI~~~~W~~YGR~fftRYDYE~~e~e~ank~m~~l~a~~~-~~  449 (558)
T KOG0625|consen  371 GEESFGTGSDHIREKDGIWAVLAWLSILAHNKQNVVEDIVKEHWAKYGRNFFTRYDYEEVEAEGANKMMEDLEALVS-DS  449 (558)
T ss_pred             ccccccCCccccccccchhhHHHHHHHHHhcccccHHHHHHHHHHHhCccceeecchhhcChHhHHHHHHHHHHHhc-cc
Confidence            9999999999999999999999999999986664 999999999999999999999999999999999999999873 36


Q ss_pred             ccCcccccCCcceeEEEcccCcccCCCCcchhhccccCCccccccccccCCcceeeecCCCccccCCCCCCCcccCcEEE
Q psy12282        160 FKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRV  239 (309)
Q Consensus       160 ~~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~~~~~~~DGik~  239 (309)
                      +.|..++.++..|+|...|||+|+||.||+++++|                                         |+|+
T Consensus       450 ~vg~~~~~~~~~y~V~~ad~F~Y~DPvDGSvs~~Q-----------------------------------------Glri  488 (558)
T KOG0625|consen  450 FVGKSFSPGDEVYKVAKADDFEYTDPVDGSVSKKQ-----------------------------------------GLRI  488 (558)
T ss_pred             cccccccCCCceEEEEecCCceecCCCCCcccccC-----------------------------------------ceEE
Confidence            77888999999999999999999999999999888                                         8999


Q ss_pred             EecCCeEEEEEeCCCCCCccEEEEEEEeeCCCccchHHHHHHHHHHHHHHHHHhcCCCcccCCCCCcccC
Q psy12282        240 LFTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFTGRDAPTVIT  309 (309)
Q Consensus       240 ~~~dG~wvliRpSGTEP~~~kiriY~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (309)
                      .|+||+++.+|.|||..+|+.||+|+|++.++..+...++|+.++.++..+++.|.+++||||.+|||||
T Consensus       489 ~F~dGsR~VfRLSGTGSsGATiRLYie~ye~d~s~~~~~aq~~LkPli~~alk~~~~~e~tGr~~PTViT  558 (558)
T KOG0625|consen  489 VFEDGSRIVFRLSGTGSSGATIRLYIESYEKDVSKIDQDAQVALKPLIDIALKISKLKEFTGREAPTVIT  558 (558)
T ss_pred             EEcCCcEEEEEeccCCCCCceEEEehhhhccchhhhCcCHHHHHHHHHHHHHHHHhHHHhhCCCCCceeC
Confidence            9999999999999999999999999999999988899999999999999999999999999999999998

>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes Back     alignment and domain information
>PLN02307 phosphoglucomutase Back     alignment and domain information
>PTZ00150 phosphoglucomutase-2-like protein; Provisional Back     alignment and domain information
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e Back     alignment and domain information
>PRK07564 phosphoglucomutase; Validated Back     alignment and domain information
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity Back     alignment and domain information
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes Back     alignment and domain information
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific Back     alignment and domain information
>PRK14321 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed Back     alignment and domain information
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>PRK15414 phosphomannomutase CpsG; Provisional Back     alignment and domain information
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1) Back     alignment and domain information
>PLN02371 phosphoglucosamine mutase family protein Back     alignment and domain information
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate Back     alignment and domain information
>PRK14324 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14317 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK10887 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14315 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14322 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14314 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>KOG1220|consensus Back     alignment and domain information
>TIGR01455 glmM phosphoglucosamine mutase Back     alignment and domain information
>PRK14323 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14316 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>PRK14320 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14319 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14318 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway Back     alignment and domain information
>PF02880 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; InterPro: IPR005846 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional Back     alignment and domain information
>PLN02895 phosphoacetylglucosamine mutase Back     alignment and domain information
>PF00408 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, C-terminal domain; InterPro: IPR005843 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information
>KOG2537|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
1lxt_A561 Structure Of Phosphotransferase Phosphoglucomutase 5e-94
1jdy_A561 Rabbit Muscle Phosphoglucomutase Length = 561 5e-94
1kfi_A572 Crystal Structure Of The Exocytosis-Sensitive Phosp 7e-70
2z0f_A524 Crystal Structure Of Putative Phosphoglucomutase Fr 4e-08
3na5_A570 Crystal Structure Of A Bacterial Phosphoglucomutase 1e-05
3olp_A570 Crystal Structure Of A Bacterial Phosphoglucomutase 1e-05
2fuv_A549 Phosphoglucomutase From Salmonella Typhimurium. Len 2e-05
>pdb|1LXT|A Chain A, Structure Of Phosphotransferase Phosphoglucomutase From Rabbit Length = 561 Back     alignment and structure 
Iteration: 1

 Score =  340 bits (873), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 165/309 (53%), Positives = 208/309 (67%), Gaps = 41/309 (13%)
Query: 1   MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFE 60
           M+LGK  FFVNPSDS+AV+AA++ SIPYF++TGV+G+ARSMPT  A+DRVA A    L+E
Sbjct: 294 MILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYE 353
Query: 61  VPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILK 120
            PTGWK+FGNLMDA +LSLCGEESFGTGSDHIREKDG+WAVLAWLS++    + VE+ILK
Sbjct: 354 TPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILK 413
Query: 121 SHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNF 180
            HW ++GRN+FTRYDYE   A    +MM +LE  +    F G   SA  + +TVE  DNF
Sbjct: 414 DHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNF 473
Query: 181 EYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVL 240
           EY DP+DGSV                                         +K QG+R++
Sbjct: 474 EYHDPVDGSV-----------------------------------------SKNQGLRLI 492
Query: 241 FTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFT 300
           F DGSR+I+RLSGTGS+GAT+RLY++SY      I  D QV L PL+ +AL++S+L + T
Sbjct: 493 FADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERT 552
Query: 301 GRDAPTVIT 309
           GR APTVIT
Sbjct: 553 GRTAPTVIT 561
>pdb|1JDY|A Chain A, Rabbit Muscle Phosphoglucomutase Length = 561 Back     alignment and structure
>pdb|1KFI|A Chain A, Crystal Structure Of The Exocytosis-Sensitive Phosphoprotein, Pp63PARAFUSIN (PHOSPHOGLUCOMUTASE) FROM Paramecium Length = 572 Back     alignment and structure
>pdb|2Z0F|A Chain A, Crystal Structure Of Putative Phosphoglucomutase From Thermus Thermophilus Hb8 Length = 524 Back     alignment and structure
>pdb|3NA5|A Chain A, Crystal Structure Of A Bacterial Phosphoglucomutase, An Enzyme Important In The Virulence Of Several Human Pathogens. Length = 570 Back     alignment and structure
>pdb|3OLP|A Chain A, Crystal Structure Of A Bacterial Phosphoglucomutase, An Enzyme Important In The Virulence Of Multiple Human Pathogens Length = 570 Back     alignment and structure
>pdb|2FUV|A Chain A, Phosphoglucomutase From Salmonella Typhimurium. Length = 549 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
3pmg_A561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 1e-114
1kfi_A572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 3e-93
3na5_A570 Phosphoglucomutase; isomerase, metal binding; HET: 1e-75
2z0f_A524 Putative phosphoglucomutase; isomerase, magnesium, 1e-60
1tuo_A464 Putative phosphomannomutase; thermus thermophilus 1e-17
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Length = 561 Back     alignment and structure
 Score =  341 bits (876), Expect = e-114
 Identities = 165/309 (53%), Positives = 208/309 (67%), Gaps = 41/309 (13%)

Query: 1   MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFE 60
           M+LGK  FFVNPSDS+AV+AA++ SIPYF++TGV+G+ARSMPT  A+DRVA A    L+E
Sbjct: 294 MILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYE 353

Query: 61  VPTGWKYFGNLMDAGRLSLCGEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILK 120
            PTGWK+FGNLMDA +LSLCGEESFGTGSDHIREKDG+WAVLAWLS++    + VE+ILK
Sbjct: 354 TPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILK 413

Query: 121 SHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNF 180
            HW ++GRN+FTRYDYE   A    +MM +LE                            
Sbjct: 414 DHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEA--------------------------- 446

Query: 181 EYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVL 240
                          +    F G   SA  + +TVE  DNFEY DP+DGSV+K QG+R++
Sbjct: 447 --------------LMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLI 492

Query: 241 FTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFT 300
           F DGSR+I+RLSGTGS+GAT+RLY++SY      I  D QV L PL+ +AL++S+L + T
Sbjct: 493 FADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERT 552

Query: 301 GRDAPTVIT 309
           GR APTVIT
Sbjct: 553 GRTAPTVIT 561
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Length = 572 Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Length = 570 Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Length = 524 Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Length = 464 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query309
3pmg_A561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 100.0
1kfi_A572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 100.0
3na5_A570 Phosphoglucomutase; isomerase, metal binding; HET: 100.0
2f7l_A455 455AA long hypothetical phospho-sugar mutase; phos 100.0
1tuo_A464 Putative phosphomannomutase; thermus thermophilus 100.0
2z0f_A524 Putative phosphoglucomutase; isomerase, magnesium, 100.0
1wqa_A455 Phospho-sugar mutase; alpha-beta protein, unphosph 100.0
1p5d_X463 PMM, phosphomannomutase; alpha/beta protein, phosp 100.0
3uw2_A485 Phosphoglucomutase/phosphomannomutase family PROT; 100.0
4hjh_A481 Phosphomannomutase; structural genomics, niaid, na 100.0
3pdk_A469 Phosphoglucosamine mutase; 4-domain architecture, 100.0
3i3w_A443 Phosphoglucosamine mutase; csgid, IDP02164, isomer 99.98
2dka_A544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 99.95
1wjw_A112 Phosphoacetylglucosamine mutase; carbohydrate meta 99.05
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Back     alignment and structure
Probab=100.00  E-value=1.9e-57  Score=461.40  Aligned_cols=268  Identities=62%  Similarity=1.079  Sum_probs=244.4

Q ss_pred             CeecCCCeeeCcchHHHHHHHHHhcCccccccCcceEEEeecchHHHHHHHHHCCCeEEEEecchHHHHHHHHhCCceEE
Q psy12282          1 MVLGKKAFFVNPSDSLAVLAAHLDSIPYFKKTGVKGYARSMPTGAAVDRVAKANNKELFEVPTGWKYFGNLMDAGRLSLC   80 (309)
Q Consensus         1 ~~vd~~g~~~~gd~l~aLla~~lle~~~~~~~g~~~vv~tv~SS~~l~~ia~~~g~~~~~t~tGfk~i~~~m~~~~~~~g   80 (309)
                      +++|++|+++++|++++|+++|++.+|.+++++..+|+.|++||.+++++|+.+|++++|||||||||+++|.+++++||
T Consensus       294 ~ivd~~G~~v~~~~~lalla~~l~~~~~~~~~~~~~vv~tv~Ss~~ld~va~~~G~~v~~t~vG~k~i~~~m~~~~~~~g  373 (561)
T 3pmg_A          294 MILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLC  373 (561)
T ss_dssp             EEEEGGGCBCCHHHHHHHHHHTGGGSHHHHHHCCCCEEEETTSCTHHHHHHHTSSSCEEEECSSHHHHHHHHHTTCCSEE
T ss_pred             EEEeCCCcEECccHHHHHHHHHHHhhhhhHhcCCCeEEEEechHHHHHHHHHHcCCCEEEEeccHHHHHHHhccCCeEEE
Confidence            47899999999999999999998755555444434699999999999999999999999999999999999999999999


Q ss_pred             EccCCCcCCCCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHhhhCcceeeeEEeecCChhhHHHHHHHHHhcCCCCCc
Q psy12282         81 GEESFGTGSDHIREKDGIWAVLAWLSVVEHTGKPVEEILKSHWKQYGRNYFTRYDYENCSAAPCNQMMDELEKKVSAPEF  160 (309)
Q Consensus        81 gEeSgG~~~~~~~dkDGi~aal~~lella~~g~~L~ell~~l~~~yG~~~~~~~~~~~~~~~~~~~im~~Lr~~~~~~~~  160 (309)
                      ||||+|++++|+++||||+|+++++|+++++|++|+|++++||++||++++.+.++..|+++.+.++|++|++...++..
T Consensus       374 GEeS~G~~~~~~~~kDGi~aal~~le~la~~g~~lsell~~l~~~yG~~~~~r~d~~~~~~~~~~~vm~~L~~~~~~~~~  453 (561)
T 3pmg_A          374 GEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSF  453 (561)
T ss_dssp             EETTTEEEETTSSSCCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHCEEEEEEEEEEEECHHHHHHHHHHHHHHHHSTTS
T ss_pred             EEecCCcCCCeeecCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhCcccccccccccCCHHHHHHHHHHHHhcCCcccc
Confidence            99999988999999999999999999999999999999999999999999999998889999999999999976533556


Q ss_pred             cCcccccCCcceeEEEcccCcccCCCCcchhhccccCCccccccccccCCcceeeecCCCccccCCCCCCCcccCcEEEE
Q psy12282        161 KGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVL  240 (309)
Q Consensus       161 ~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~~~~~~~DGik~~  240 (309)
                      .|..+.++++.|+|...|||+|+||.|+++                                         ++.||+|+.
T Consensus       454 ~g~~~~~~~~~~~v~~~~~f~~~dpvd~~v-----------------------------------------~~~dGvri~  492 (561)
T 3pmg_A          454 VGKQFSANDKVYTVEKADNFEYHDPVDGSV-----------------------------------------SKNQGLRLI  492 (561)
T ss_dssp             TTCEEEETTEEEEEEEEEECCEECTTTCCE-----------------------------------------ECCCCEEEE
T ss_pred             cccccccccccceeeecccccccCcccCcc-----------------------------------------ccCceEEEE
Confidence            677777777789999999999999988855                                         345799999


Q ss_pred             ecCCeEEEEEeCCCCCCccEEEEEEEeeCCCccchHHHHHHHHHHHHHHHHHhcCCCcccCCCCCcccC
Q psy12282        241 FTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFTGRDAPTVIT  309 (309)
Q Consensus       241 ~~dG~wvliRpSGTEP~~~kiriY~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (309)
                      |+||+|+++|||||||+||+||+|+|+.+++..++.+++++.++.+++.+++++++..||||+.|||||
T Consensus       493 ~~dgswvlvRpSGte~~~P~lRvY~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  561 (561)
T 3pmg_A          493 FADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT  561 (561)
T ss_dssp             ETTSCEEEEEEEECSSSCEEEEEEEEEEECCTTTTTSCHHHHHHHHHHHHHHHHTHHHHHCCSSCSEEC
T ss_pred             eCCCCEEEEecCCCCCCCceEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCCCccC
Confidence            999999999999999777799999999998888899999999999999999999999999999999998
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Back     alignment and structure
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii} Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Back     alignment and structure
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X* Back     alignment and structure
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis} Back     alignment and structure
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV} Back     alignment and structure
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis} Back     alignment and structure
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp} Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Back     alignment and structure
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 309
d3pmga4141 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit ( 2e-68
d1kfia4129 d.129.2.1 (A:444-572) Exocytosis-sensitive phospho 2e-59
d3pmga3117 c.84.1.1 (A:304-420) Phosphoglucomutase {Rabbit (O 9e-35
d1kfia3120 c.84.1.1 (A:324-443) Exocytosis-sensitive phosphop 2e-27
>d3pmga4 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 141 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Phosphoglucomutase, C-terminal domain
family: Phosphoglucomutase, C-terminal domain
domain: Phosphoglucomutase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  207 bits (529), Expect = 2e-68
 Identities = 77/182 (42%), Positives = 100/182 (54%), Gaps = 41/182 (22%)

Query: 128 RNYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPID 187
           RN+FTRYDYE   A    +MM +LE  +    F G   SA  + +TVE  DNFEY     
Sbjct: 1   RNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYH---- 56

Query: 188 GSVAKKQKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVLFTDGSRL 247
                                                DP+DGSV+K QG+R++F DGSR+
Sbjct: 57  -------------------------------------DPVDGSVSKNQGLRLIFADGSRI 79

Query: 248 IYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQVALELSKLPQFTGRDAPTV 307
           I+RLSGTGS+GAT+RLY++SY      I  D QV L PL+ +AL++S+L + TGR APTV
Sbjct: 80  IFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTV 139

Query: 308 IT 309
           IT
Sbjct: 140 IT 141
>d1kfia4 d.129.2.1 (A:444-572) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Length = 129 Back     information, alignment and structure
>d3pmga3 c.84.1.1 (A:304-420) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 117 Back     information, alignment and structure
>d1kfia3 c.84.1.1 (A:324-443) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Length = 120 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query309
d3pmga4141 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 99.96
d3pmga3117 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 99.95
d1kfia4129 Exocytosis-sensitive phosphoprotein, pp63/parafusi 99.94
d1kfia3120 Exocytosis-sensitive phosphoprotein, pp63/parafusi 99.93
d1p5dx3109 Phosphomannomutase/phosphoglucomutase {Pseudomonas 99.89
d1p5dx496 Phosphomannomutase/phosphoglucomutase {Pseudomonas 99.62
d1wjwa_112 Phosphoacetylglucosamine mutase {Mouse (Mus muscul 98.97
>d3pmga4 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Phosphoglucomutase, C-terminal domain
family: Phosphoglucomutase, C-terminal domain
domain: Phosphoglucomutase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=4.7e-31  Score=220.84  Aligned_cols=140  Identities=54%  Similarity=0.919  Sum_probs=131.9

Q ss_pred             ceeeeEEeecCChhhHHHHHHHHHhcCCCCCccCcccccCCcceeEEEcccCcccCCCCcchhhccccCCcccccccccc
Q psy12282        129 NYFTRYDYENCSAAPCNQMMDELEKKVSAPEFKGVTLSAEGRSFTVEAGDNFEYTDPIDGSVAKKQKVSAPEFKGVTLSA  208 (309)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~im~~Lr~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (309)
                      +++.|.+|+.|+.+..+++|+.|+..+..+.+.|..++.+++.|+|..+|||+|+||+||+|+++|              
T Consensus         2 nyytRyDYE~v~s~~A~~~m~~L~~~~~~~~l~G~~~~~~~~~~~v~~aDdFsYtDPVDgSvs~~Q--------------   67 (141)
T d3pmga4           2 NFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQ--------------   67 (141)
T ss_dssp             EEEEEEEEEEECHHHHHHHHHHHHHHHHSTTSTTCEEEETTEEEEEEEEEECCEECTTTCCEECCC--------------
T ss_pred             CcCccCCcCCCCHHHHHHHHHHHHHHhcCcccCCCcccCCCceeEEEecCceeecCCCCCccccCC--------------
Confidence            346799999999999999999999877556778999999999999999999999999999998888              


Q ss_pred             CCcceeeecCCCccccCCCCCCCcccCcEEEEecCCeEEEEEeCCCCCCccEEEEEEEeeCCCccchHHHHHHHHHHHHH
Q psy12282        209 EGRSFTVEAGDNFEYTDPIDGSVAKKQGVRVLFTDGSRLIYRLSGTGSSGATVRLYVESYVPATGDIEADAQVALKPLVQ  288 (309)
Q Consensus       209 ~~~~~~v~~~~~~~~~d~~~~~~~~~DGik~~~~dG~wvliRpSGTEP~~~kiriY~Ea~~~~~~~~~~~~~~~~~~~~~  288 (309)
                                                 |||+.|+||+++.+|.|||..+|+.||+|+|...++..+...+.|+.|+.+++
T Consensus        68 ---------------------------GlRi~F~dGsRiVfRLSGTGs~GATiRlY~E~ye~d~~~~~~~~q~aL~~li~  120 (141)
T d3pmga4          68 ---------------------------GLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLIS  120 (141)
T ss_dssp             ---------------------------CEEEEETTSCEEEEEEEECSSSCEEEEEEEEEEECCTTTTTSCHHHHHHHHHH
T ss_pred             ---------------------------cEEEEEcCCCEEEEEecCCCCCCcEEEEEEEeccCChHHcCcCHHHHHHHHHH
Confidence                                       89999999999999999999999999999999998888899999999999999


Q ss_pred             HHHHhcCCCcccCCCCCcccC
Q psy12282        289 VALELSKLPQFTGRDAPTVIT  309 (309)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~  309 (309)
                      .++++|++..||||++|||||
T Consensus       121 ~Al~~s~i~~~tGr~~PtVIT  141 (141)
T d3pmga4         121 IALKVSQLQERTGRTAPTVIT  141 (141)
T ss_dssp             HHHHHHTHHHHHCCSSCSEEC
T ss_pred             HHHHHHHHHHHhCCCCCCccC
Confidence            999999999999999999998
>d3pmga3 c.84.1.1 (A:304-420) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1kfia4 d.129.2.1 (A:444-572) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure
>d1kfia3 c.84.1.1 (A:324-443) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure
>d1p5dx3 c.84.1.1 (X:259-367) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1p5dx4 d.129.2.1 (X:368-463) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1wjwa_ d.129.2.1 (A:) Phosphoacetylglucosamine mutase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure