Psyllid ID: psy12306

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640---
PFEYLILLTIFANCVALAVYTPYPNSDSNSTNAYLENIEYIFLVIFTVECVMKILAYGFVAHPGAYLRNGWNLLDFTIVVIGGYWEGPNNGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGEFSKEREKAKARGDFHKLREKQQIEEDLRGYLDWITQAEDIEPEGEERANHHDQKNKSSSETESADRLEGDEGENQESWWRKKNKDFDRNNRRMRRACRKAVKSQGFYWLIIILVFLNTGVLATEHYQQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQEESPPRSIMENEEEEEEGSIIEGEEIEDESVREEEDGVKVQLENCDSEFYDYSYQADIMNNEDARPRRLSEFNTATKKQPIPPASSFFIFSATNPFRVWCHWICNHDHFGNAILFLGYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSFNLLDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSKHRFHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAKPVRRYIPKQRLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELVDDNPEPSHRVSPTNSVDYLPYTSIQLNGMNDSSKMNNIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELVDDNPEPSHRVLAEYGLGKFAYPELVKYTSKEMQEALNMTQEEMDRAAHKLIIQERHNQFQDTLQVSPTNSVDYLPYTSIQLNGMNDSSKMNNC
cccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccccccHHHccccccccccccccccccccccccccccHHHHHHccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEccHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHcccccccccHHHHccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccEEEEccccHHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHcccccEEEEEEEEHHHcccHHHHHHHHHHHHHHHHccccEEEEEEHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEcccccccccccccEEccccccHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccEEEEEEEEHHHHcccHHHHcEEEEEEEccHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEHHHHHHHHccccccccccccccccccccccEEEEEHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHcccccccccccEEEHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccHHEEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccHHcccccccccHHHHHccccccccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEccccccccccEccccEEEEEccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcHHHHHccHHHHHHccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEcccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccEEEEEEEEEEEEccccEcccHHHHHHHHHHHcccccccccccccccHHccccccccccccccEEEEEEcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEccccHHHcHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccHHcccccEccccccccccccccccEccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccHcHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcHHccccEcHHHHHHHHHHcccccccccccccHHHHHHHHHccccccccccEEEHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccHHHHHcccccccccccEcHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcHHHHHHHcccccHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHcccccHHHHHHHHHHcccccccEEEEHHHHHHHHcccccccccccccccEEcccEEEccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccccccccccccccccccccccEEEEcccccccHHccccccccccccccccccccccccccccccc
PFEYLILLTIFANCVALavytpypnsdsnstnayLENIEYIFLVIFTVECVMKILAYGfvahpgaylrngwnllDFTIVVIGgywegpnngitnfdnfGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGEFSKEREKAKARGDFHKLREKQQIEEDLRGYLDWItqaediepegeeranhhdqknksssetesadrlegdegenqesWWRKKNKDFDRNNRRMRRACRKAVKSQGFYWLIIILVFLNTGVlatehyqqpkwldsFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMiltrtnimpplgvSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMqvfggkfnfnptiakprsnfDSFWQSLLTVFQQeqkgqeespprsimeneeeeeegsiiegeeiedesvreeeDGVKVQLencdsefydysyqadimnnedarprrlsefntatkkqpippassffifsatnpfrvwchwicnhdhfgNAILFLGYFDNFFTAVFTIEILLKIISYGfilhdgafcrssfNLLDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQlfkgkffqcndgskmtkaechgtylvfsngkidepsievrewskhrfhfDDVAKAMLTLFTVstfegwpgllynsidsnlenhgpihnyrpiVATYYIIYIIIIAFFMVNIFVGFVIVTFQnegeqeyknceldkNQRNCIEFALkakpvrryipkqrLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSfidifsdspphaaakatipgsheqtsgrlsiNFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFgggihrnnnfqtFPQAVLVLFRSATGEAWQDIMLDcsnrpsevkcdaasdgnptnddnvscgsdiaypYFISFYVLCSFLIINLFVAVIMDnfdyltrdwsilgphHLDEFIRLWSeydpdakgrikhlDVVTLLRkispplgfgklcphrVACKRLvsmnmplnsdgtvLFNATLFAVVRTSlriktegniDDANAELRAVIKKIWKRTSNEllnqvvpppggeeevtVGKFYATFLIQDYFRRFKKRKEQelkdgdkeshNTVTLQAGLRTLHDAGPELKRAISGNleelvddnpepshrvsptnsvdylpytsiqlngmndsskMNNIINLFVAVIMDnfdyltrdwsilgphHLDEFIRLWSeydpdakgrikhlDVVTLLRkispplgfgklcphrvaceeevTVGKFYATFLIQDYFRRFKKRKEQelkdgdkeshNTVTLQAGLRTLHDAGPELKRAISGNleelvddnpepshrvlaeyglgkfaypeLVKYTSKEMQEALNMTQEEMDRAAHKLIIQERHNQfqdtlqvsptnsvdylpytsiqlngmndsskmnnc
PFEYLILLTIFANCVALAVYTPYPNSDSNSTNAYLENIEYIFLVIFTVECVMKILAYGFVAHPGAYLRNGWNLLDFTIVVIGGYWEGPNNGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGEFSKEREKakargdfhklrekqqieeDLRGYLDWITQAEDIEPEgeeranhhdqknksssetesadrlegdegenqeswwrkknkdfdrnnrrMRRACRkavksqgfyWLIIILVFLNTGVLATEHYQQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQeqkgqeespprsimeneeeeeegsiiegeeiedesvreeEDGVKVQLENCDSEFYDYSYQADIMNNEDARPRRLSEFntatkkqpippaSSFFIFSATNPFRVWCHWICNHDHFGNAILFLGYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSFNLLDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAinrakglkhvVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVfsngkidepSIEVREWSKHRFHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYknceldknqRNCIEFalkakpvrryipkqrlqYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDIFSDSPPHAAAKAtipgsheqtsgrlSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKispplgfgklCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTSlriktegniddanAELRAVIKKIWKRTsnellnqvvpppggeeeVTVGKFYATFLIQDYFRRFKKRKEqelkdgdkeshntVTLQAGLRTLHDAGPELKRAISGNLEelvddnpepshrvsptnsvdYLPYTSIQLNGMNDSSKMNNIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACEEEVTVGKFYATFLIQDYFRRFKKRKEqelkdgdkeshntVTLQAGLRTLHDAGPELKRAISGNLeelvddnpepSHRVLAEYGLGKFAYPELVKYTSKEMQEALNMTQEEMDRAAHKLIIQERHNQFQDtlqvsptnsvDYLPYTsiqlngmndsskmnnc
PFEYLILLTIFANCVALAVYTPYPNSDSNSTNAYLENIEYIFLVIFTVECVMKILAYGFVAHPGAYLRNGWNLLDFTIVVIGGYWEGPNNGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGEFSKEREKAKARGDFHKLREKQQIEEDLRGYLDWITQAEDIEPEGEERANHHDQKNKSSSETESADRLEGDEGENQESWWrkknkdfdrnnrrmrracrkavkSQGFYWLIIILVFLNTGVLATEHYQQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSvlrcvrllrvFKVTKYWRslsnlvasllnsiqsiaslllllflfivifallGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQEESPPRSIMeneeeeeegsiiegeeiedesvreeedgvKVQLENCDSEFYDYSYQADIMNNEDARPRRLSEFNTATKKQPIPPASSFFIFSATNPFRVWCHWICNHDHFGNAILFLGYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSFNlldllvvivsvvAIYWNSAAIAFVKIlrvlrvlrplrAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSKHRFHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATyyiiyiiiiAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAKPVRRYIPKQRLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELVDDNPEPSHRVSPTNSVDYLPYTSIQLNGMNDSSKMNNIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELVDDNPEPSHRVLAEYGLGKFAYPELVKYTSKEMQEALNMTQEEMDRAAHKLIIQERHNQFQDTLQVSPTNSVDYLPYTSIQLNGMNDSSKMNNC
**EYLILLTIFANCVALAVYTPYPNSDSNSTNAYLENIEYIFLVIFTVECVMKILAYGFVAHPGAYLRNGWNLLDFTIVVIGGYWEGPNNGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGE*************************DLRGYLDWITQ***********************************************************ACRKAVKSQGFYWLIIILVFLNTGVLATEHYQQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVF************************************************LENCDSEFYDYSYQADI***************************SFFIFSATNPFRVWCHWICNHDHFGNAILFLGYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSFNLLDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSKHRFHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAKPVRRYIPKQRLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDIFS*********************RLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCS*********************VSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKFYATFLIQDYFRRF***************************************************************DYLPYTSIQLNGMNDSSKMNNIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACEEEVTVGKFYATFLIQDYFRRF*******************************************************RVLAEYGLGKFAYPELVKYT*********************LIIQ****************SVDYLPYTSI**************
PFEYLILLTIFANCVALAVYTPYPNSDSNSTNAYLENIEYIFLVIFTVECVMKILAYGFVAHPGAYLRNGWNLLDFTIVVIGGYWEGPNNGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGEFSKERE******DF*KLREKQQIEEDLRGYLDWITQAEDI********************************ENQESWWRKKNKDFDRNNRRMRRACRKAVKSQGFYWLIIILVFLNTGVLATEHYQQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQK************************GEEIEDESVREEEDGVKVQLENCDS*******************************QPIPPASSFFIFSATNPFRVWCHWICNHDHFGNAILFLGYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSFNLLDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSKHRFHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQ*****ELDKNQRNCIEFAL*AK***RYIPKQRLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTS***********************************VPPPGGEEEVTVGKFYATFLIQDYFRR*****************************************************************************************************************DEFIRLWSEYDPDAKGRIKHLDVVTL***********************VTVGKFYATFLIQDYF****************************************************************GLGKFAYPELVK*******************************************************************
PFEYLILLTIFANCVALAVYTPYPNSDSNSTNAYLENIEYIFLVIFTVECVMKILAYGFVAHPGAYLRNGWNLLDFTIVVIGGYWEGPNNGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGEF**********GDFHKLREKQQIEEDLRGYLDWITQAEDIEP**********************************SWWRKKNKDFDRNNRRMRRACRKAVKSQGFYWLIIILVFLNTGVLATEHYQQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQ*************************IIEGEEI************KVQLENCDSEFYDYSYQADIMNNEDARPRRLSEFNTATKKQPIPPASSFFIFSATNPFRVWCHWICNHDHFGNAILFLGYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSFNLLDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSKHRFHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAKPVRRYIPKQRLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDIFSDSP***************TSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELVDDNPEPSHRVSPTNSVDYLPYTSIQLNGMNDSSKMNNIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELVDDNPEPSHRVLAEYGLGKFAYPELVKYTSKEMQEALNMTQEEMDRAAHKLIIQERHNQFQDTLQVSPTNSVDYLPYTSIQLNGMN********
PFEYLILLTIFANCVALAVYTPYPNSDSNSTNAYLENIEYIFLVIFTVECVMKILAYGFVAHPGAYLRNGWNLLDFTIVVIGGYWEGPNNGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGEFSKEREKAKARGDFHKLREKQQIEEDLRGYLDWITQAEDI***************************************RKKNKDFDRNNRRMRRACRKAVKSQGFYWLIIILVFLNTGVLATEHYQQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQEESPPRSIMENEEEEEEGSIIEGEEIEDESVREEEDGVKVQLENCDSEFYDYSYQADIMNNEDARPRRLSEFNTATKKQPIPPASSFFIFSATNPFRVWCHWICNHDHFGNAILFLGYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSFNLLDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSKHRFHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAKPVRRYIPKQRLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDIFSDSPPH****************RLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLE*************************S*QLNGMNDSSKMNNIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELVDDNPEPSHRVLAEYGLGKFAYPELVKYTSK****************AHKLIIQERHNQFQDTLQVSPTNSVDYLPYTSIQL************
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PFEYLILLTIFANCVALAVYTPYPNSDSNSTNAYLENIEYIFLVIFTVECVMKILAYGFVAHPGAYLRNGWNLLDFTIVVIGGYWEGPNNGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFFVMNLILGVLSGEFSKEREKAKARGDFHKLREKQQIEEDLRGYLDWITQAEDIEPEGEERANHHDQKNKSSSETESADRLEGDEGENQESWWRKKNKDFDRNNRRMRRACRKAVKSQGFYWLIIILVFLNTGVLATEHYQQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFNPTIAKPRSNFDSFWQSLLTVFQQEQKGQEESPPRSIMENEEEEEEGSIIEGEEIEDESVREEEDGVKVQLENCDSEFYDYSYQADIMNNEDARPRRLSEFNTATKKQPIPPASSFFIFSATNPFRVWCHWICNHDHFGNAILFLGYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSFNLLDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSKHRFHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAKPVRRYIPKQRLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELVDDNPEPSHRVSPTNSVDYLPYTSIQLNGMNDSSKMNNIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELVDDNPEPSHRVLAEYGLGKFAYPELVKYTxxxxxxxxxxxxxxxxxxxxxLIIQERHNQFQDTLQVSPTNSVDYLPYTSIQLNGMNDSSKMNNC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1643 2.2.26 [Sep-21-2011]
Q254521687 Muscle calcium channel su N/A N/A 0.738 0.719 0.644 0.0
Q136981873 Voltage-dependent L-type yes N/A 0.732 0.642 0.535 0.0
P072931873 Voltage-dependent L-type yes N/A 0.732 0.642 0.539 0.0
Q027891880 Voltage-dependent L-type yes N/A 0.730 0.638 0.537 0.0
Q24270 2516 Voltage-dependent calcium yes N/A 0.487 0.318 0.741 0.0
P15381 2171 Voltage-dependent L-type no N/A 0.484 0.366 0.632 0.0
Q01815 2139 Voltage-dependent L-type no N/A 0.484 0.372 0.632 0.0
Q99246 2179 Voltage-dependent L-type no N/A 0.486 0.366 0.628 0.0
Q01668 2161 Voltage-dependent L-type no N/A 0.482 0.366 0.629 0.0
P22002 2169 Voltage-dependent L-type yes N/A 0.484 0.366 0.628 0.0
>sp|Q25452|CAC1M_MUSDO Muscle calcium channel subunit alpha-1 OS=Musca domestica PE=2 SV=1 Back     alignment and function desciption
 Score = 1659 bits (4295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 902/1399 (64%), Positives = 1022/1399 (73%), Gaps = 185/1399 (13%)

Query: 85   WEGPNNGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGRTWQWTYFVSMVILGAFF 144
            W GPN+GITNFDNFGL+MLTVFQCITLEGWTDVLY+I+DA+G +W+W YFVSMVILGAFF
Sbjct: 258  WVGPNDGITNFDNFGLSMLTVFQCITLEGWTDVLYSIQDAMGSSWEWIYFVSMVILGAFF 317

Query: 145  VMNLILGVLSGEFSKEREKAKARGDFHKLREKQQIEEDLRGYLDWITQAEDIEPEGEERA 204
            VMNLILGVLSGEFSKER KAK RGDF KLREKQQIEEDLRGYLDWITQAEDIEP+ + + 
Sbjct: 318  VMNLILGVLSGEFSKERTKAKNRGDFQKLREKQQIEEDLRGYLDWITQAEDIEPDPDAQI 377

Query: 205  NHHDQKNKSSSETESADRLEGDEGENQE--SWWRKKNKDFDRNNRRMRRACRKAVKSQGF 262
                 KNK   E  S D L+  E E Q+  SW+R + K  +R NRR+RRACRKAVKSQ F
Sbjct: 378  IEDCHKNKVK-EVVSIDNLKDHENETQQTDSWFRSQKKYLERINRRIRRACRKAVKSQAF 436

Query: 263  YWLIIILVFLNTGVLATEHYQQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNI 322
            YWLII+LVFLNTGVLATEHY+QP WLD FQE TN                         I
Sbjct: 437  YWLIILLVFLNTGVLATEHYRQPIWLDQFQEYTN-------------------------I 471

Query: 323  FFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRC 382
            FF+ALFT EM LKMYSLGFQGYFVSLFNRFDCFVVIGSI EM+LT + +M PLGVSVLRC
Sbjct: 472  FFIALFTCEMILKMYSLGFQGYFVSLFNRFDCFVVIGSISEMVLTSSELMAPLGVSVLRC 531

Query: 383  VRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIV------------------ 424
            VRLLRVFKVTKYW SLSNLVASLLNSIQSIASLLLLLFLFIV                  
Sbjct: 532  VRLLRVFKVTKYWHSLSNLVASLLNSIQSIASLLLLLFLFIVIFGLLGMQVFGGRFTFKP 591

Query: 425  ------------------IFALL-----------GMQVFGGKFNF--------------- 440
                              +F +L           G++ +GG F+F               
Sbjct: 592  EEEKPRSNFDSFYQSLLTVFQILTGEDWNVVMYDGIRAYGGVFSFGIVACIYYIILFICG 651

Query: 441  -----NPTIAKPRSNFDSFWQSLLTVFQQ-EQKGQEESPPRSIMENEEEEEEGSIIE--- 491
                 N  +A    N      SL T+ ++ E + Q ++  ++ MENEE  + G  I    
Sbjct: 652  NYILLNVFLAIAVDNLAD-ADSLSTIEKEDESQIQLDNQIKNEMENEEYLQNGDHISFKA 710

Query: 492  --GEEIEDESVREEEDGVKVQLENCDSEFYDYSYQADIMNNEDARPRRLSEFNTATKKQP 549
              G ++ D  +++EE G     EN       Y+    +     + PRR +  +    K+ 
Sbjct: 711  EFGADL-DTYLQDEECGSYSDDENT------YNKLGGVKQRVSSLPRRNTNTDMDRIKKD 763

Query: 550  IPPASSFFIFSATNPFRVWCHWICNHDHFGNAIL------------------------FL 585
            IP  +SFFIFS TN FR++CH +CNH +FGN IL                         L
Sbjct: 764  IPYGTSFFIFSHTNRFRIFCHRLCNHSNFGNFILCCIMFSSAMLAAENPLKADASRNIVL 823

Query: 586  GYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSFNLLDLLVVIVSVVAIYWNSAAIAF 645
              FD FFTAVFTIE++LK+ISYGF+LHDGAFCRS+FNLLDLLVV VS+++I++NS AI+ 
Sbjct: 824  NKFDYFFTAVFTIELVLKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISIFFNSNAISV 883

Query: 646  VKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKY 705
            VKILRVLRVLRPLRAINRAKGLKHVV                                  
Sbjct: 884  VKILRVLRVLRPLRAINRAKGLKHVV---------------------------------- 909

Query: 706  VVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFS 765
              +CVIVA+KTIGNI+LVT LL FMFAV+GVQLFKGKFF C+DGSK+ +++CHGTYL + 
Sbjct: 910  --QCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKGKFFSCSDGSKVYESDCHGTYLFYE 967

Query: 766  NGKIDEPSIEVREWSKHRFHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHN 825
            NG I++P ++ REW  ++FHFDDVAKAMLTLFTVSTFEGWP LLY SIDSN EN GPI+N
Sbjct: 968  NGDINKPRLKEREWKNNKFHFDDVAKAMLTLFTVSTFEGWPTLLYVSIDSNKENGGPIYN 1027

Query: 826  YRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAK 885
            +RPIVA YYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAK
Sbjct: 1028 FRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRNCIEFALKAK 1087

Query: 886  PVRRYIPKQRLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMF 945
            PVRRYIPK  +QYK+WWFVTS  FEY+IF LIMINT+TLAMKFY+QP +Y++ILD +NM 
Sbjct: 1088 PVRRYIPKHSIQYKVWWFVTSSSFEYSIFVLIMINTVTLAMKFYKQPEYYSEILDALNMI 1147

Query: 946  FTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDI-FSDSPPHAAAKATIPGSH 1004
            FT VF+LEF+FKLAAFRFKNYF DAWN FDF+IV+GSFIDI +S+      A AT  G  
Sbjct: 1148 FTAVFSLEFIFKLAAFRFKNYFGDAWNTFDFIIVLGSFIDIVYSEIKTKEQALATCDGQS 1207

Query: 1005 ----EQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFF 1060
                +  S  +SINFFRLFRVMRL+KLLS+GEGIRTLLWTFIKSFQALPYVALLIVMLFF
Sbjct: 1208 CNKAKGGSTLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIVMLFF 1267

Query: 1061 IYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEV 1120
            IYAVIGMQVFGKI L  G  I RNNNFQTFPQAVLVLFRSATGEAWQ+IM+ CS R  +V
Sbjct: 1268 IYAVIGMQVFGKIMLEEGTSIDRNNNFQTFPQAVLVLFRSATGEAWQEIMMACSPR-DDV 1326

Query: 1121 KCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSIL 1180
            KCD      P +D   +CGS IA+PYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSIL
Sbjct: 1327 KCD------PESDAVNNCGSSIAFPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSIL 1380

Query: 1181 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMP 1240
            GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHR+ACKRLVSMNMP
Sbjct: 1381 GPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMP 1440

Query: 1241 LNSDGTVLFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSNELLNQVVPPPG 1300
            LNSDGTVLFNATLFAVVR  L IKT+GNID+ANAELRA IK+IWKRT+  LL+QVV   G
Sbjct: 1441 LNSDGTVLFNATLFAVVRLPLAIKTDGNIDEANAELRATIKQIWKRTNPRLLDQVV-LTG 1499

Query: 1301 GEEEVTVGKFYATFLIQDYFRRFKKRKEQELKDGDKESHNTVTLQAGLRTLHDAGPELKR 1360
             ++EVTVGKFYAT+LIQDYFRRFKKRKEQE K    E  N VTLQAGLRTL    P LKR
Sbjct: 1500 NDDEVTVGKFYATYLIQDYFRRFKKRKEQEGKCDQTE--NAVTLQAGLRTLQQNSPALKR 1557

Query: 1361 AISGNLEELVDDNPEPSHR 1379
             ISG L+EL  +  +P HR
Sbjct: 1558 TISGYLDELASE-ADPMHR 1575
Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death (By similarity). MDL-alpha1 encodes a dihydropyridine- and diltiazem-sensitive current in larval body wall muscle.
Musca domestica (taxid: 7370)
>sp|Q13698|CAC1S_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo sapiens GN=CACNA1S PE=1 SV=4 Back     alignment and function description
>sp|P07293|CAC1S_RABIT Voltage-dependent L-type calcium channel subunit alpha-1S OS=Oryctolagus cuniculus GN=CACNA1S PE=1 SV=1 Back     alignment and function description
>sp|Q02789|CAC1S_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus musculus GN=Cacna1s PE=1 SV=2 Back     alignment and function description
>sp|Q24270|CAC1D_DROME Voltage-dependent calcium channel type D subunit alpha-1 OS=Drosophila melanogaster GN=Ca-alpha1D PE=1 SV=2 Back     alignment and function description
>sp|P15381|CAC1C_RABIT Voltage-dependent L-type calcium channel subunit alpha-1C OS=Oryctolagus cuniculus GN=CACNA1C PE=1 SV=1 Back     alignment and function description
>sp|Q01815|CAC1C_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1C OS=Mus musculus GN=Cacna1c PE=1 SV=1 Back     alignment and function description
>sp|Q99246|CAC1D_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1D OS=Mus musculus GN=Cacna1d PE=1 SV=3 Back     alignment and function description
>sp|Q01668|CAC1D_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1D OS=Homo sapiens GN=CACNA1D PE=1 SV=2 Back     alignment and function description
>sp|P22002|CAC1C_RAT Voltage-dependent L-type calcium channel subunit alpha-1C OS=Rattus norvegicus GN=Cacna1c PE=1 SV=1 Back     alignment and function description

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1643
FB|FBgn0001991 2516 Ca-alpha1D "Ca[2+]-channel pro 0.419 0.274 0.760 0.0
MGI|MGI:103013 2139 Cacna1c "calcium channel, volt 0.497 0.382 0.595 0.0
UNIPROTKB|F1MA95 1981 Cacna1c "Voltage-dependent L-t 0.497 0.412 0.595 0.0
UNIPROTKB|F1M5G9 1984 Cacna1c "Voltage-dependent L-t 0.498 0.412 0.589 0.0
WB|WBGene000011871877 egl-19 [Caenorhabditis elegans 0.418 0.366 0.674 0.0
RGD|2245 2169 Cacna1c "calcium channel, volt 0.496 0.376 0.582 0.0
UNIPROTKB|F5GY28 2209 CACNA1C "Voltage-dependent L-t 0.418 0.311 0.659 0.0
UNIPROTKB|E9PDJ0 2173 CACNA1C "Voltage-dependent L-t 0.418 0.316 0.659 0.0
UNIPROTKB|E9PDJ1 2138 CACNA1C "Voltage-dependent L-t 0.418 0.321 0.659 0.0
UNIPROTKB|P15381 2171 CACNA1C "Voltage-dependent L-t 0.418 0.316 0.659 0.0
FB|FBgn0001991 Ca-alpha1D "Ca[2+]-channel protein alpha[[1]] subunit D" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 2761 (977.0 bits), Expect = 0., Sum P(7) = 0.
 Identities = 541/711 (76%), Positives = 602/711 (84%)

Query:   680 TIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLF 739
             ++  I+ V  +L+ + A+   +  K+VV+CVIVA+KTIGNI+LVT LL FMFAV+GVQLF
Sbjct:  1436 SVVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLF 1495

Query:   740 KGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSKHRFHFDDVAKAMLTLFTV 799
             KGKFF+C DGSKMT+ EC+GTYLV+ +G + +P +  REWS +RFHFDDVAK MLTLFTV
Sbjct:  1496 KGKFFKCTDGSKMTQDECYGTYLVYDDGDVHKPRLREREWSNNRFHFDDVAKGMLTLFTV 1555

Query:   800 STFEGWPGLLYNSIDSNLENHGPIHNYRPIVATXXXXXXXXXAFFMVNIFVGFVIVTFQN 859
             STFEGWPGLLY SIDSN EN GPIHN+RPIVA          AFFMVNIFVGFVIVTFQN
Sbjct:  1556 STFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQN 1615

Query:   860 EGEQEYKNCELDKNQRNCIEFALKAKPVRRYIPKQRLQYKIWWFVTSQYFEYTIFCLIMI 919
             EGEQEYKNC+LDKNQRNCIEFALKAKPVRRYIPK  +QYK+WWFVTS  FEYTIF LIMI
Sbjct:  1616 EGEQEYKNCDLDKNQRNCIEFALKAKPVRRYIPKHGIQYKVWWFVTSSSFEYTIFILIMI 1675

Query:   920 NTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIV 979
             NT+TLAMKFY QPL+Y ++LD +NM FT VFALEFVFKLAAFRFKNYF DAWNVFDF+IV
Sbjct:  1676 NTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKNYFGDAWNVFDFIIV 1735

Query:   980 MGSFIDIF-----SDSPPHAAAKATIPG--SHEQTSGR--LSINFFRLFRVMRLIKLLSR 1030
             +GSFIDI      S      A    + G  S ++++G   +SINFFRLFRVMRL+KLLS+
Sbjct:  1736 LGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSK 1795

Query:  1031 GEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTF 1090
             GEGIRTLLWTFIKSFQALPYVALLIV+LFFIYAV+GMQVFGKIAL  G  I  NNNFQTF
Sbjct:  1796 GEGIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQVFGKIALDGGNAITANNNFQTF 1855

Query:  1091 PQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASD--GNPTNDDNVSCGSDIAYPYFI 1148
              QAVLVLFRSATGEAWQ+IM+ CS +P +VKCD  SD  G P       CGS IAYPYFI
Sbjct:  1856 QQAVLVLFRSATGEAWQEIMMSCSAQP-DVKCDMNSDTPGEP-------CGSSIAYPYFI 1907

Query:  1149 SFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDV 1208
             SFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDV
Sbjct:  1908 SFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDV 1967

Query:  1209 VTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLRIKTEGN 1268
             VTLLRKISPPLGFGKLCPHR+ACKRLVSMNMPLNSDGTVLFNATLFAVVRTSL IKT+GN
Sbjct:  1968 VTLLRKISPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIKTDGN 2027

Query:  1269 IDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKFYATFLIQDYFRRFKKRKE 1328
             IDDAN+ELRA IK+IWKRT+ +LL+QVVPPPG ++EVTVGKFYAT+LIQDYFRRFKKRKE
Sbjct:  2028 IDDANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEVTVGKFYATYLIQDYFRRFKKRKE 2087

Query:  1329 QELKDGDKESHNTVTLQAGLRTLHDAGPELKRAISGNLEELVDDNPEPSHR 1379
             QE K+G  +S NTVTLQAGLRTLH+  P LKRAISGNL+EL D  PEP HR
Sbjct:  2088 QEGKEGHPDS-NTVTLQAGLRTLHEVSPALKRAISGNLDEL-DQEPEPMHR 2136
GO:0005891 "voltage-gated calcium channel complex" evidence=IEA;ISS;NAS
GO:0005245 "voltage-gated calcium channel activity" evidence=IEA;ISS;NAS
GO:0006816 "calcium ion transport" evidence=NAS
GO:0006936 "muscle contraction" evidence=TAS
GO:0042045 "epithelial fluid transport" evidence=IEP;IDA
GO:0016324 "apical plasma membrane" evidence=IDA
GO:0016323 "basolateral plasma membrane" evidence=IDA
GO:0009790 "embryo development" evidence=NAS
GO:0070588 "calcium ion transmembrane transport" evidence=IEA
MGI|MGI:103013 Cacna1c "calcium channel, voltage-dependent, L type, alpha 1C subunit" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1MA95 Cacna1c "Voltage-dependent L-type calcium channel subunit alpha-1C" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1M5G9 Cacna1c "Voltage-dependent L-type calcium channel subunit alpha-1C" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
WB|WBGene00001187 egl-19 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
RGD|2245 Cacna1c "calcium channel, voltage-dependent, L type, alpha 1C subunit" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F5GY28 CACNA1C "Voltage-dependent L-type calcium channel subunit alpha-1C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PDJ0 CACNA1C "Voltage-dependent L-type calcium channel subunit alpha-1C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PDJ1 CACNA1C "Voltage-dependent L-type calcium channel subunit alpha-1C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P15381 CACNA1C "Voltage-dependent L-type calcium channel subunit alpha-1C" [Oryctolagus cuniculus (taxid:9986)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P07293CAC1S_RABITNo assigned EC number0.53970.73210.6422yesN/A
Q24270CAC1D_DROMENo assigned EC number0.74140.48750.3183yesN/A
O73700CAC1D_CHICKNo assigned EC number0.62980.48200.3616yesN/A
Q02789CAC1S_MOUSENo assigned EC number0.53710.73030.6382yesN/A
P22002CAC1C_RATNo assigned EC number0.62840.48440.3669yesN/A
Q13698CAC1S_HUMANNo assigned EC number0.53540.73210.6422yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1643
pfam00520194 pfam00520, Ion_trans, Ion transport protein 7e-45
pfam00520194 pfam00520, Ion_trans, Ion transport protein 2e-35
pfam00520194 pfam00520, Ion_trans, Ion transport protein 1e-33
pfam0876332 pfam08763, Ca_chan_IQ, Voltage gated calcium chann 9e-15
pfam0876332 pfam08763, Ca_chan_IQ, Voltage gated calcium chann 9e-15
pfam00520194 pfam00520, Ion_trans, Ion transport protein 1e-13
smart0106231 smart01062, Ca_chan_IQ, Voltage gated calcium chan 2e-12
smart0106231 smart01062, Ca_chan_IQ, Voltage gated calcium chan 2e-12
pfam00520194 pfam00520, Ion_trans, Ion transport protein 5e-07
pfam08016423 pfam08016, PKD_channel, Polycystin cation channel 2e-04
>gnl|CDD|215968 pfam00520, Ion_trans, Ion transport protein Back     alignment and domain information 
 Score =  160 bits (408), Expect = 7e-45
 Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 42/230 (18%)

Query: 942  MNMFFTTVFALEFVFKLAAFRFK-NYFSDAWNVFDFVIVMGSFIDIFSDSPPHAAAKATI 1000
            ++  FT +F LE + K  A  FK  YF   WN+ DF++V+ S + +              
Sbjct: 2    LDYVFTVIFTLEMLLKFIALGFKRKYFRSPWNILDFLVVLPSLVSLIL------------ 49

Query: 1001 PGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFF 1060
                        +   RL R++RL++LL R  G+RTLL +  +S ++L  + LL+++L F
Sbjct: 50   ---FLLGEDSGLLRVLRLLRLLRLLRLLRRFPGLRTLLQSLGRSLKSLLNLLLLLLLLLF 106

Query: 1061 IYAVIGMQVFGKIALVFG----GGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNR 1116
            I+A+IG+Q+FG             I+ N+NF ++ +A+L LFR+ T E W D+M D    
Sbjct: 107  IFAIIGVQLFGGELDKCCDKNENPINGNSNFDSYGEALLWLFRTLTTEGWGDVMYDT--- 163

Query: 1117 PSEVKCDAASDGNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVI 1166
                               +  G+ +   +F+ F +L   L++NL + VI
Sbjct: 164  -------------------LVPGTVLGKIFFVIFIILGGVLLLNLLIGVI 194

This family contains Sodium, Potassium, Calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not the Pfam family due to it lacking the first four helices. Length = 194
>gnl|CDD|215968 pfam00520, Ion_trans, Ion transport protein Back     alignment and domain information
>gnl|CDD|215968 pfam00520, Ion_trans, Ion transport protein Back     alignment and domain information
>gnl|CDD|149732 pfam08763, Ca_chan_IQ, Voltage gated calcium channel IQ domain Back     alignment and domain information
>gnl|CDD|149732 pfam08763, Ca_chan_IQ, Voltage gated calcium channel IQ domain Back     alignment and domain information
>gnl|CDD|215968 pfam00520, Ion_trans, Ion transport protein Back     alignment and domain information
>gnl|CDD|198130 smart01062, Ca_chan_IQ, Voltage gated calcium channel IQ domain Back     alignment and domain information
>gnl|CDD|198130 smart01062, Ca_chan_IQ, Voltage gated calcium channel IQ domain Back     alignment and domain information
>gnl|CDD|215968 pfam00520, Ion_trans, Ion transport protein Back     alignment and domain information
>gnl|CDD|219699 pfam08016, PKD_channel, Polycystin cation channel Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1643
KOG2301|consensus1592 100.0
KOG2302|consensus1956 100.0
KOG2301|consensus1592 100.0
KOG2302|consensus1956 100.0
PF00520200 Ion_trans: Ion transport protein calcium channel s 99.78
PF00520200 Ion_trans: Ion transport protein calcium channel s 99.76
KOG3713|consensus477 99.75
PLN032231634 Polycystin cation channel protein; Provisional 99.69
KOG1545|consensus507 99.62
KOG3713|consensus477 99.52
PLN032231634 Polycystin cation channel protein; Provisional 99.44
KOG1545|consensus507 99.43
KOG4390|consensus632 99.36
PF0876335 Ca_chan_IQ: Voltage gated calcium channel IQ domai 99.33
PF08016425 PKD_channel: Polycystin cation channel; InterPro: 99.23
KOG3599|consensus798 99.2
KOG4390|consensus632 98.82
PF08016425 PKD_channel: Polycystin cation channel; InterPro: 98.67
KOG3599|consensus798 98.67
KOG1419|consensus654 98.66
TIGR00870743 trp transient-receptor-potential calcium channel p 98.37
PF0876335 Ca_chan_IQ: Voltage gated calcium channel IQ domai 98.22
KOG1419|consensus654 97.83
TIGR00870743 trp transient-receptor-potential calcium channel p 97.65
PLN03192823 Voltage-dependent potassium channel; Provisional 97.49
KOG3609|consensus822 97.11
PLN03192823 Voltage-dependent potassium channel; Provisional 96.85
KOG3614|consensus1381 95.76
KOG3733|consensus566 94.99
KOG3609|consensus822 92.45
KOG0510|consensus929 87.48
KOG3676|consensus782 86.09
KOG1420|consensus 1103 86.02
KOG0498|consensus727 82.58
PRK10537393 voltage-gated potassium channel; Provisional 81.17
>KOG2301|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.8e-202  Score=1980.34  Aligned_cols=1240  Identities=37%  Similarity=0.583  Sum_probs=1041.2

Q ss_pred             CcchhHHHHHHHHHHHHHhcCCCCCCCCChhhHHHhhhhHHHHHHHHHHHHHHHhhhcccccCcccccccccccceeEEE
Q psy12306          1 PFEYLILLTIFANCVALAVYTPYPNSDSNSTNAYLENIEYIFLVIFTVECVMKILAYGFVAHPGAYLRNGWNLLDFTIVV   80 (1643)
Q Consensus         1 ~F~~~Il~~Il~Nci~la~~~p~~~~d~~~~~~~l~~~E~iF~~iFt~E~~lKiiA~Gf~~~~~aYLrd~WN~lDf~VVi   80 (1643)
                      ||+.+|++||++||++||++.|         +.+++..||+|++|||+|+++||+|+||++|+++||||||||+||+||+
T Consensus        77 ~f~~~i~~ti~~ncv~~~~~~~---------~~~~~~~e~~f~~i~~~E~~~ki~a~G~~~~~~sylr~~wn~ldf~vvv  147 (1592)
T KOG2301|consen   77 WFSLFILATIIANCVVMAMTPL---------NYWILAAEYTFLGIFTFESVVKILARGFFRCDFSYLRDPWNWLDFVVIV  147 (1592)
T ss_pred             cHHHHHHHHHHHHeeeeccCCC---------CcchhhcceehhhHHHHHHHHHHHHHHhhcCCCcccCCccccccEEEee
Confidence            7999999999999999999833         2357889999999999999999999999999999999999999999999


Q ss_pred             ec------------------------------------------------------------------------------
Q psy12306         81 IG------------------------------------------------------------------------------   82 (1643)
Q Consensus        81 ~g------------------------------------------------------------------------------   82 (1643)
                      +|                                                                              
T Consensus       148 ~~~~s~~~~~~~~~~lR~frvlr~lk~vs~~~~lk~~~~~ii~~~~~l~~~~~l~~f~~~ifa~igl~lf~g~l~~~C~~  227 (1592)
T KOG2301|consen  148 IGLLSTLLHLYNIRALRTFRVLRALKLVSGIPGLKTRVGALIKASKQLVDVVILTFFFLSVFALIGLQLFMGRLTYKCVQ  227 (1592)
T ss_pred             eehHHHhccccchhhhccccccchhhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHhhhc
Confidence            77                                                                              


Q ss_pred             -c----------------------------------cccCCCCcccccCcHHHHHHHHHHhhcccChHHHHHHHHHhcCC
Q psy12306         83 -G----------------------------------YWEGPNNGITNFDNFGLAMLTVFQCITLEGWTDVLYNIEDALGR  127 (1643)
Q Consensus        83 -~----------------------------------~~~~Pn~G~t~FDnf~~A~ltlFqliT~egW~dVmy~~~da~g~  127 (1643)
                       +                                  .|.|||+|||+||||+||++|+|||+|+|||+|++|+++|+.| 
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~p~~g~t~Fd~f~~a~lt~f~~~tqe~w~~~~y~~~~a~g-  306 (1592)
T KOG2301|consen  228 PKPNNVTINDRAIPDTYCAPEGIGGLLCGNNYVCMQLGANPNGGYTSFDSFGWAFLTVFRLMTQEGWEDLLYLTLDALG-  306 (1592)
T ss_pred             CCCCCceeccccCcccccCcCCCCccccCCccchhhcCCCCCCCcccchHHHHHHHHHHHHHhhcchHHHHHHHHHhcc-
Confidence             1                                  1889999999999999999999999999999999999999999 


Q ss_pred             ceeeehhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhhhcccccCCchhhhcccc
Q psy12306        128 TWQWTYFVSMVILGAFFVMNLILGVLSGEFSKEREKAKARGDFHKLREKQQIEEDLRGYLDWITQAEDIEPEGEERANHH  207 (1643)
Q Consensus       128 ~~~~iyFV~~I~iGsFfllNL~LAVI~~~F~~er~k~~~r~~f~~l~~~~q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  207 (1643)
                      .|+|+|||++|++||||++||+|||++++|+|||++.+.+.++++.|.+|+.+++++++.+|..++++....++......
T Consensus       307 ~~~~~~Fv~~i~lgsf~~~nl~l~vls~~f~e~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (1592)
T KOG2301|consen  307 KWYMLFFVTLIFLGSFYVKNLFLAVLSMAFAEERVAFEEEWQFKEPRFQEAFEELLEKYEDGIFLAEADGSVESGPKSKL  386 (1592)
T ss_pred             cceeEeeehhhhhccHHHHHHHHHHhhHHHHHHHHHHHhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhhhhccccchhh
Confidence            89999999999999999999999999999999999999999999999999999999999999988887654433110000


Q ss_pred             ccccCCCCcccccccccCCccccchhhhhhccc-----cccccchhhhhhhhccccccchhhhHhHHHHHHHHHHHhhcc
Q psy12306        208 DQKNKSSSETESADRLEGDEGENQESWWRKKNK-----DFDRNNRRMRRACRKAVKSQGFYWLIIILVFLNTGVLATEHY  282 (1643)
Q Consensus       208 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~~~~~iv~s~~F~~~i~~~IllN~i~la~e~~  282 (1643)
                      . ........................++.+..+     ...+++.+++..++++++++.|++++.+++++|+++++++||
T Consensus       387 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~~~~~~~i~i~i~lnt~~~a~eh~  465 (1592)
T KOG2301|consen  387 F-SVDSLEDVNSRVELLSAVSYKCPLAWYKSAKNFLIWFCCPIWLKFKQWLRKMVFDPFVILFITICIALNTLFMAMEHY  465 (1592)
T ss_pred             h-hhhhhhhhhhhhhhhhhhcccCchHhHhhccceeeeccchHHHHHHHHHHHhhhcceehhhhHHHHhhcccEEEEEEe
Confidence            0 0000000000000000001111222322222     334567889999999999999999999999999999999999


Q ss_pred             CCCccchhhhhhhhhHHHHHHHHHHHhhhhcccccchhhhhHHHHHHHHHHHhhheecccccccccccccceeeeehhhh
Q psy12306        283 QQPKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMTLKMYSLGFQGYFVSLFNRFDCFVVIGSIG  362 (1643)
Q Consensus       283 ~~~~~~~~~l~~~n~~~~~lf~~e~~~~~~~~~~~~~~~~~f~~iF~iE~iLKi~a~G~~~Yf~~~wNifD~~vvl~sii  362 (1643)
                      +++++.+..+.++|.+|+++                         |++||.+|++|+|++.||+++||+||+++++.+++
T Consensus       466 ~~~~~~~~~l~~~~~vF~~l-------------------------F~~Em~~ki~al~~~~yF~~~~n~fD~~iv~l~~~  520 (1592)
T KOG2301|consen  466 EMTKARNYLLYLGNVVFTGL-------------------------FTVEMILKIYALGPRNYFRRGWNIFDLIIVLLSLL  520 (1592)
T ss_pred             CCcHHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHcCcHHHHhhhcchheEEEEehhhH
Confidence            99999888877776666665                         99999999999999999999999999999996666


Q ss_pred             hHHhhhccCCCCCcchhhHHHHHhHhhhhhhchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCC
Q psy12306        363 EMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFNP  442 (1643)
Q Consensus       363 ~lil~~~~~~~~~~l~vLR~~RlLRi~kl~r~~~~l~~L~~ti~~s~~~l~~l~lll~l~i~iFAilGmqlFgg~~~~~~  442 (1643)
                      ++.     ...+.++++||++|+||++|++|+|++++.+++.+.+|++++++++++++++++|||++|||+|||.++++ 
T Consensus       521 ~~~-----~~~~~g~svLr~frllRIfkl~k~wp~l~~lv~~i~ns~~~l~~L~l~l~i~i~Ifa~~gmqlFg~~~n~~-  594 (1592)
T KOG2301|consen  521 ELL-----LKNVYGLSVLRSFRLLRIFKLIKSWPTLNDLVKSIFNSGKALGNLVLFLFIFIFIFAAIGMQLFGGVYNLH-  594 (1592)
T ss_pred             Hhc-----ccchHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhhHHhhCcccCCC-
Confidence            654     34456899999999999999999999999999999999999999999999999999999999999998876 


Q ss_pred             CCCCCCCCCCChhhhhhhheecccCCCCCC--------------------------------------C-----CCcccc
Q psy12306        443 TIAKPRSNFDSFWQSLLTVFQQEQKGQEES--------------------------------------P-----PRSIME  479 (1643)
Q Consensus       443 ~~~~~~~nFd~f~~A~vTlF~iltge~w~~--------------------------------------~-----~~~~~~  479 (1643)
                      .  .+.+||++|++|+++||| +|+|+|..                                      |     ..++.|
T Consensus       595 ~--~~~~~~~~fp~sfl~vFq-lt~e~W~evm~~~~~~~~~~~~~i~Fi~~~l~gn~vvLnlFlAl~~~n~~~~el~~~e  671 (1592)
T KOG2301|consen  595 C--DIHWHFTDFPHSFLSVFQ-ITCEEWTDVMWDCMEAAGQPLCAIYFIAYFLFGNLVVLNLFLALILDNFESDELKKPE  671 (1592)
T ss_pred             C--CCccchhhCHHHHHHHHH-HcCCchHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhhcCChh
Confidence            2  334999999999999999 77787753                                      1     122233


Q ss_pred             chhHHhhcCCCc-------------cc----------ccccc--ch--hhhcccc---------------ccccc-----
Q psy12306        480 NEEEEEEGSIIE-------------GE----------EIEDE--SV--REEEDGV---------------KVQLE-----  512 (1643)
Q Consensus       480 ~e~~~~~~~~~~-------------~~----------~~~~~--~~--~~~~~~~---------------~~~~~-----  512 (1643)
                      +++++++.+...             ..          +..++  ..  .+...++               .+..+     
T Consensus       672 ~~~e~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  751 (1592)
T KOG2301|consen  672 QLKEREALQLARSRIPKGLRVVKAFITRPFMAAMRKMPKVRDSAVDHSLEIESNITEDEEFPKRIMKSNGSSRTSGSLSE  751 (1592)
T ss_pred             hhhhHHhhhhhhhhhhhhhhhHhhhhcchhhHhhcccchhhhhhhhhchhcccccchhcccccccccccccccccccccc
Confidence            333322211000             00          00000  00  0000000               00000     


Q ss_pred             ------cCCC-----cccCCchhhhhcccc--------------ccC-ccccccccccCCccCCCCCCceeeeCCCChhh
Q psy12306        513 ------NCDS-----EFYDYSYQADIMNNE--------------DAR-PRRLSEFNTATKKQPIPPASSFFIFSATNPFR  566 (1643)
Q Consensus       513 ------~~~~-----~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~~~~~~~~~~~~~slf~f~~~n~~R  566 (1643)
                            ...+     +......+.+.....              ..+ ++...+...+..+.+.++.++.+..+.+| +|
T Consensus       752 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n-~r  830 (1592)
T KOG2301|consen  752 NDDASFISRSTKKAPKENAEQGEIEIRKLQLKRQEAEETRNRIEEDLREFCKKEVCSKYGSQCDGSVDSAKGKSWFN-IR  830 (1592)
T ss_pred             hhhhhcccccccccccccccccccchhhhhhhhhhhhhhcccccccchhhhhhccccccccccCccccccccccccc-ce
Confidence                  0000     000000000000000              000 11112222333445667888999999999 99


Q ss_pred             HHHhhcccccchhHHHHH-------------------------HhhhhchhhhHhhhhhheeeEEEeceecCcccccccC
Q psy12306        567 VWCHWICNHDHFGNAILF-------------------------LGYFDNFFTAVFTIEILLKIISYGFILHDGAFCRSSF  621 (1643)
Q Consensus       567 ~~c~~iv~~~~F~~~Il~-------------------------L~~~d~ift~iF~iE~~lKiia~G~~~~~~~Y~r~~W  621 (1643)
                      +.|+++|+|.||+.+|++                         |.|+|++||.+|++||++||+|+|+..    |+||.|
T Consensus       831 ~~c~~iv~~~~f~~~I~~~illSs~ala~ed~~~~~~~~~~~~L~y~D~~Ft~iFt~Em~lK~ia~Gf~~----y~rn~w  906 (1592)
T KOG2301|consen  831 KTCHIIVEHDWFEAFILTVILISSLALAFEDVRGENRPTINGILEYADYIFTYIFTFEMLLKWIAYGFFF----YFRNAW  906 (1592)
T ss_pred             eeeeeeeeeeHHHHHHHHHHHHhhhcccccCcchhhchhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHH----HHhhHH
Confidence            999999999999998876                         899999999999999999999999984    999999


Q ss_pred             CcccEEEehhhhHHHhhcccchhHHHHHHHhhhhhhhhhhhcccChhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhh
Q psy12306        622 NLLDLLVVIVSVVAIYWNSAAIAFVKILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQ  701 (1643)
Q Consensus       622 N~lDf~vVi~sli~~~~~~~~ls~lr~lR~lRvLRpLR~i~~~~~lk~vv~~l~~si~~i~nv~lv~~l~~~iFaiiG~~  701 (1643)
                      |++||+||++|+++++....+++.+|+||++|+|||||+++|+|+||+|++|++.|+|+|+|+++|++++++        
T Consensus       907 ~~lDf~Vv~vslisl~~~~~~~~~ik~lr~lRaLRPLR~i~r~~~mr~Vv~~l~~a~~~I~nv~lV~li~~f--------  978 (1592)
T KOG2301|consen  907 NWLDFVVVIVSLISLIASLKILSLIKSLRILRALRPLRALSRFPGMRVVVLALFGGLPEIFNVLLVCLIFWF--------  978 (1592)
T ss_pred             hhhhHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence            999999999999999977667788999999999999999999999999999999999999999988776654        


Q ss_pred             heeceeeEEEeccccccchhHHHHHHHHHhhhhcccccCCcccccCCCCCCCccccCCceeeecCCCCCCCccccccccC
Q psy12306        702 LFKYVVKCVIVAIKTIGNIMLVTYLLSFMFAVMGVQLFKGKFFQCNDGSKMTKAECHGTYLVFSNGKIDEPSIEVREWSK  781 (1643)
Q Consensus       702 lF~~~~rc~~~~i~~i~~l~~~~~~~~~iFai~Gv~lF~Gk~~~C~d~~~~~~~~C~~~~~~~~~g~~~~~~~~~~~W~~  781 (1643)
                                                  |||++|||+|+|||++|+|++..++.+|.+.|..++++...  ...++.|.|
T Consensus       979 ----------------------------iFai~gv~lF~Gkf~~C~d~~~~~~~~~~~~y~~~~~~~~~--~~~~~~w~n 1028 (1592)
T KOG2301|consen  979 ----------------------------IFAIMGVQLFAGKFYACNDPTVGSRLTRTEVYNKYECESLP--RAPRRWWNN 1028 (1592)
T ss_pred             ----------------------------HHHHHHHHHHCCCceeccCCCcchhhhhhhhhccCchhhhh--hccceEEec
Confidence                                        59999999999999999999999999999988877766543  566799999


Q ss_pred             CccccccHHHHHHHhhhhcccCCchhhhhhhcccccCCCCcccccccceeeEeEEEeehhhHHHHHHHHHHHHHhhhchh
Q psy12306        782 HRFHFDDVAKAMLTLFTVSTFEGWPGLLYNSIDSNLENHGPIHNYRPIVATYYIIYIIIIAFFMVNIFVGFVIVTFQNEG  861 (1643)
Q Consensus       782 ~~~nFDn~~~a~ltLF~v~T~egW~dimy~~~ds~~~~~~P~~~~~~~~~iyFi~fiiig~ff~lNLfvgvii~~F~~~~  861 (1643)
                      +++||||+++||++|||++|+|||+++||.++|+++++.||.++++.++++||++|+++|+||.+|+|+|||++||++++
T Consensus      1029 ~~~nfDnv~~a~laLf~v~tf~GW~~i~~~~ids~~~~~~p~~~~~~~~~~ffvifii~~~ff~lnlFvgvII~nf~~q~ 1108 (1592)
T KOG2301|consen 1029 RKFNFDNVGNAMLALFQVATFKGWPDIMYAAIDSRGVNAQPILESNLYMYLFFVIFIIIGSFFTLNLFVGVIIDNFNQQK 1108 (1592)
T ss_pred             cccccccHHHHHHHHHHHHhcCCHHHHHHHHhhhhccCcCCcccccccceeehhhhhhHHhhhheeeeEEEEEechhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhh-ccccchhhhhHHHHhhhcCCCccccCccc--ccceeeeeeeccchhhhhhHHHHhhhheeeeeeccCChhHHHH
Q psy12306        862 EQEYK-NCELDKNQRNCIEFALKAKPVRRYIPKQR--LQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADI  938 (1643)
Q Consensus       862 e~~~~-~~~l~k~q~~~~~~~~~~kp~~~~~P~~~--~r~~~~~iv~s~~Fe~~I~~lIllN~i~la~e~~~~~~~~~~~  938 (1643)
                      ++++. ++..+++|+.+.+..+++||.++++|+++  +|+++|++|+++.|++.++++|++|+++|++++++|+.+++.+
T Consensus      1109 ~~~~~~~~~~eq~~~~~~~~~l~sk~~~r~ipr~~~~~q~~~~~~v~~~~F~~~i~~li~ln~i~l~~~~~~qs~~~~~~ 1188 (1592)
T KOG2301|consen 1109 GKAGGTFMTEEQKKRLNAAKKLGSKPPQRPIPRPRNKLQGLVFDLVTSQAFDYLIMLLIFLNTIIMMVETYDQSDTYTAI 1188 (1592)
T ss_pred             hhhhhhhhhHHHHHHHHHHHHhcCCCCCCCCCCCcchhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhccchHHHHHH
Confidence            99888 77788888888999999999999887655  9999999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHhhhcccccccccccceeehhhHhHHHHHHh-cCCCccccccccCCCCCcccCcceeeeeee
Q psy12306        939 LDKMNMFFTTVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDIF-SDSPPHAAAKATIPGSHEQTSGRLSINFFR 1017 (1643)
Q Consensus       939 l~~in~~ft~iF~iE~iLKi~a~g~~~Yf~~~wNifDfivVi~sii~ii-~~~~~~~~~~~~~~g~~~~~~~~~~i~~lR 1017 (1643)
                      +..+|.+|+.+|++|+++|++|++++.||+++||+||+++|++|+++.+ .......            .++..+.+++|
T Consensus      1189 l~~in~vft~~Ft~E~vLKiiA~~~~~yf~~~WN~FDfvvvIlSIv~~~ls~~~~~~------------~~~~~~~~~~r 1256 (1592)
T KOG2301|consen 1189 LTILNAVFIVLFTIECILKVIALRFRGYFTSAWNVFDFVVTILSIVGIVLSEAVEKY------------ESSPTLLRFLR 1256 (1592)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHhccccchheEeeeeeHhHHHHHHHHHHHhh------------ccchhhHHHHH
Confidence            9999999999999999999999999999999999999999999999998 3322110            02345678999


Q ss_pred             ehhhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCCHhHHHHhh
Q psy12306       1018 LFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVL 1097 (1643)
Q Consensus      1018 l~RvlRllrLi~~~~~lr~Ll~tl~~S~~~L~~v~lLl~l~~fIfAiiGmqlFg~~~~~~~~~i~~~~NF~tf~~A~ltL 1097 (1643)
                      ++|++|++|++++.+++|+|++|+++|+|+++++++++++++||||++|||+||+++.+   ++++++||+||++||++|
T Consensus      1257 l~rV~R~l~Li~~~~~ir~LL~t~~~Sl~al~~i~lLl~ll~fiYAi~Gmq~Fg~Vkl~---~i~~~~NF~tf~~a~i~L 1333 (1592)
T KOG2301|consen 1257 LFRVGRFLRLIPQAKTIRTLLLTLMMSLPALFFIILLLFLLFFIYAIIGMQLFGYVKLG---GINDHNNFRTFPNSMVVL 1333 (1592)
T ss_pred             HHHHHHHHHhccccchhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhheecc---ccCCCcccccchhheeee
Confidence            99999999999999999999999999999999999999999999999999999999865   899999999999999999


Q ss_pred             hccccccccHHHHHhhcCCCCCcccCCCCCCCCCCCCCCCcCcc-eeeeeeehhhHHHHHHHHHHHHHHHHHhhhhhhhc
Q psy12306       1098 FRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVSCGSD-IAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRD 1176 (1643)
Q Consensus      1098 F~v~Tge~W~~im~~~~~~~~~~~Cd~~~~~~~~~~~~~~Cgs~-~a~iyFisf~ii~~fiilNLfVAvIidnF~~~~~~ 1176 (1643)
                      |||+|||||+++|+||+.++  |.|||+.+..     .++|||+ +|++||+||+++++||++|||||||+|||++++++
T Consensus      1334 Fr~~Tge~W~~im~~~l~s~--p~Cdp~~~~~-----~~dCGn~~~Ai~YF~Sf~iIs~~IvvNLfVAVImeNFs~~t~~ 1406 (1592)
T KOG2301|consen 1334 FRCATGEGWNDIMDDCLNSK--PFCDPDDGNN-----GTDCGNPTVAIIYFVSWILISSYIVVNLFVAVILENFSYATED 1406 (1592)
T ss_pred             eehhhhhhHHHHHHHHhcCC--CCCCCCCCCc-----ccccCCCCcceehhhHHHHHHHHHHHHHHHHHHHhhhhhhccc
Confidence            99999999999999999986  4999977642     1299965 99999999999999999999999999999999999


Q ss_pred             cc-cCCccchHHHHHHhcccCCCCCcceehhhHHHHHHhcCCCcccCCCCchHHHHHHHHhcCCcccCCCceEhHHHHHH
Q psy12306       1177 WS-ILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVLFNATLFA 1255 (1643)
Q Consensus      1177 ~~-~l~~~~l~~f~~~W~~~Dp~~~g~i~~~~l~~ll~~l~~Plg~~~~~~~~~~~~~l~~~~~p~~~~~~v~f~~~l~~ 1255 (1643)
                      ++ .++++|+|+|+++|++|||++||+|++.+++++++.++|||+++|.||+     +++.||||+.+||+|||+|+|+|
T Consensus      1407 ~s~~Ls~~d~~~F~~vW~~fDpeatg~I~~~~~~~~lr~L~ppL~~~k~~~~-----kli~mdmp~~~gd~V~f~d~L~a 1481 (1592)
T KOG2301|consen 1407 SSEGLSEDDFEKFYEAWDEFDPEATQEIPYSDLSAFLRSLDPPLDLGKPNKR-----KLISMDLPMVSGDRVHCLDILFA 1481 (1592)
T ss_pred             ccccCCcccHHHHHHHHHhcChhhheeeeHhhHHHHHHhcCCccccCCCCCc-----eeeeeecCcCCCCeeehhhHHHH
Confidence            88 8999999999999999999999999999999999999999999999987     78999999999999999999999


Q ss_pred             HHHhhhhccccCC---cchhHHHHHHHHHHHHhhcCccccccccCCCCCCcceeehhHHHHHHHHHHHHHHHHHHHHhhh
Q psy12306       1256 VVRTSLRIKTEGN---IDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKFYATFLIQDYFRRFKKRKEQELK 1332 (1643)
Q Consensus      1256 l~~~~l~i~~~g~---~~~~~~~l~~~~~~~w~~~~~~~l~~~~~~~~~~~~~tv~~~~a~~~I~~~fr~f~~~~~~~~~ 1332 (1643)
                      ++|++++|+++++   ..+++++++...+++|+++..+++++..++++   ..+++++|+.+.+++.+|+.++ ++++..
T Consensus      1482 L~~r~l~i~~~~~~~~~~q~e~~~~~~~~~i~~~~i~~~l~~l~~~~~---a~~i~~~y~~~~~~~~~~~~~~-~~~~~~ 1557 (1592)
T KOG2301|consen 1482 LTKRVLGIKKELDKVRELQEEEFLASIPSKISYEPITTTLKRLQEPLS---ATIIQRAYRGYLLRDSDKRSSK-DERDGD 1557 (1592)
T ss_pred             HHHHhhcccccccHHHHHHHHHHHhhcchhhccchHHHHHHhhccchh---hHHHHHHHHHHHHHHHHhhccc-cccccc
Confidence            9999999999887   44567788888999999988888888776554   7789999999999999998887 655432


Q ss_pred             cCCCCCccchhhhhhhhhcccCChhhhhhhcCC
Q psy12306       1333 DGDKESHNTVTLQAGLRTLHDAGPELKRAISGN 1365 (1643)
Q Consensus      1333 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~g~ 1365 (1643)
                      +.      ...++++.+++++..|+......|.
T Consensus      1558 ~~------~~~~~~~~~~~~~~~p~~~~~~~~~ 1584 (1592)
T KOG2301|consen 1558 FR------GDLLLEKEGNLHDRAPENEFAEKSL 1584 (1592)
T ss_pred             cc------cccccccccchhccCcccccCcccc
Confidence            21      2344556666666556555444443

>KOG2302|consensus Back     alignment and domain information
>KOG2301|consensus Back     alignment and domain information
>KOG2302|consensus Back     alignment and domain information
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins Back     alignment and domain information
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins Back     alignment and domain information
>KOG3713|consensus Back     alignment and domain information
>PLN03223 Polycystin cation channel protein; Provisional Back     alignment and domain information
>KOG1545|consensus Back     alignment and domain information
>KOG3713|consensus Back     alignment and domain information
>PLN03223 Polycystin cation channel protein; Provisional Back     alignment and domain information
>KOG1545|consensus Back     alignment and domain information
>KOG4390|consensus Back     alignment and domain information
>PF08763 Ca_chan_IQ: Voltage gated calcium channel IQ domain; InterPro: IPR014873 Ca2+ ions are unique in that they not only carry charge but they are also the most widely used of diffusible second messengers Back     alignment and domain information
>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys Back     alignment and domain information
>KOG3599|consensus Back     alignment and domain information
>KOG4390|consensus Back     alignment and domain information
>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys Back     alignment and domain information
>KOG3599|consensus Back     alignment and domain information
>KOG1419|consensus Back     alignment and domain information
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
>PF08763 Ca_chan_IQ: Voltage gated calcium channel IQ domain; InterPro: IPR014873 Ca2+ ions are unique in that they not only carry charge but they are also the most widely used of diffusible second messengers Back     alignment and domain information
>KOG1419|consensus Back     alignment and domain information
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>KOG3609|consensus Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>KOG3614|consensus Back     alignment and domain information
>KOG3733|consensus Back     alignment and domain information
>KOG3609|consensus Back     alignment and domain information
>KOG0510|consensus Back     alignment and domain information
>KOG3676|consensus Back     alignment and domain information
>KOG1420|consensus Back     alignment and domain information
>KOG0498|consensus Back     alignment and domain information
>PRK10537 voltage-gated potassium channel; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1643
3oxq_E78 Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN 3e-30
3oxq_E78 Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN 1e-08
3g43_E81 Crystal Structure Of The Calmodulin-Bound Cav1.2 C- 4e-29
3g43_E81 Crystal Structure Of The Calmodulin-Bound Cav1.2 C- 3e-07
4dey_B106 Crystal Structure Of The Voltage Dependent Calcium 1e-22
4dxw_A229 Crystal Structure Of Navrh, A Voltage-Gated Sodium 2e-09
4dex_B113 Crystal Structure Of The Voltage Dependent Calcium 4e-09
3rvy_A285 Crystal Structure Of The Navab Voltage-Gated Sodium 1e-08
3rw0_A285 Crystal Structure Of The Navab Voltage-Gated Sodium 6e-08
4ekw_A285 Crystal Structure Of The Navab Voltage-Gated Sodium 6e-08
2be6_D37 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC 7e-08
2be6_D37 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC 1e-07
1vyt_E25 Beta3 Subunit Complexed With Aid Length = 25 7e-07
>pdb|3OXQ|E Chain E, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN COMPLEX Length = 78 Back     alignment and structure 
Iteration: 1

 Score =  131 bits (330), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 62/79 (78%), Positives = 73/79 (92%), Gaps = 1/79 (1%)
Query: 1251 ATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSNELLNQVVPPPGGEEEVTVGKF 1310
             TLFA+VRT+LRIKTEGN++ AN ELRA+IKKIWKRTS +LL+QVV PP G++EVTVGKF
Sbjct: 1    GTLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVV-PPAGDDEVTVGKF 59
Query: 1311 YATFLIQDYFRRFKKRKEQ 1329
            YATFLIQ+YFR+FKKRKEQ
Sbjct: 60   YATFLIQEYFRKFKKRKEQ 78
>pdb|3OXQ|E Chain E, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN COMPLEX Length = 78 Back     alignment and structure
>pdb|3G43|E Chain E, Crystal Structure Of The Calmodulin-Bound Cav1.2 C-Terminal Regulatory Domain Dimer Length = 81 Back     alignment and structure
>pdb|3G43|E Chain E, Crystal Structure Of The Calmodulin-Bound Cav1.2 C-Terminal Regulatory Domain Dimer Length = 81 Back     alignment and structure
>pdb|4DEY|B Chain B, Crystal Structure Of The Voltage Dependent Calcium Channel Beta-2 Subunit In Complex With The Cav1.2 I-Ii Linker Length = 106 Back     alignment and structure
>pdb|4DXW|A Chain A, Crystal Structure Of Navrh, A Voltage-Gated Sodium Channel Length = 229 Back     alignment and structure
>pdb|4DEX|B Chain B, Crystal Structure Of The Voltage Dependent Calcium Channel Beta-2 Subunit In Complex With The Cav2.2 I-Ii Linker Length = 113 Back     alignment and structure
>pdb|3RVY|A Chain A, Crystal Structure Of The Navab Voltage-Gated Sodium Channel (Ile217cys, 2.7 A) Length = 285 Back     alignment and structure
>pdb|3RW0|A Chain A, Crystal Structure Of The Navab Voltage-Gated Sodium Channel (Met221cys, 2.95 A) Length = 285 Back     alignment and structure
>pdb|4EKW|A Chain A, Crystal Structure Of The Navab Voltage-Gated Sodium Channel (Wild- Type, 3.2 A) Length = 285 Back     alignment and structure
>pdb|2BE6|D Chain D, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 37 Back     alignment and structure
>pdb|2BE6|D Chain D, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 37 Back     alignment and structure
>pdb|1VYT|E Chain E, Beta3 Subunit Complexed With Aid Length = 25 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1643
3rvy_A285 ION transport protein; tetrameric ION channel, vol 2e-84
3rvy_A285 ION transport protein; tetrameric ION channel, vol 2e-45
3rvy_A285 ION transport protein; tetrameric ION channel, vol 2e-41
3rvy_A285 ION transport protein; tetrameric ION channel, vol 3e-19
3rvy_A285 ION transport protein; tetrameric ION channel, vol 1e-15
3rvy_A285 ION transport protein; tetrameric ION channel, vol 3e-04
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 3e-80
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 3e-43
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 1e-36
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 1e-16
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 1e-15
4dck_A168 Sodium channel protein type 5 subunit alpha; IQ-mo 2e-43
4dck_A168 Sodium channel protein type 5 subunit alpha; IQ-mo 2e-24
2kav_A129 Sodium channel protein type 2 subunit alpha; volta 7e-38
2kav_A129 Sodium channel protein type 2 subunit alpha; volta 8e-23
3g43_E81 Voltage-dependent L-type calcium channel subunit a 1e-35
3g43_E81 Voltage-dependent L-type calcium channel subunit a 6e-09
4dey_B106 Voltage-dependent L-type calcium channel subunit; 3e-33
4dex_B113 Voltage-dependent N-type calcium channel subunit; 3e-32
2be6_D37 Voltage-dependent L-type calcium channel alpha-1C; 3e-12
2be6_D37 Voltage-dependent L-type calcium channel alpha-1C; 6e-11
2r9r_B514 Paddle chimera voltage gated potassium channel KV; 6e-12
2r9r_B514 Paddle chimera voltage gated potassium channel KV; 6e-10
2r9r_B514 Paddle chimera voltage gated potassium channel KV; 7e-07
3beh_A355 MLL3241 protein; transmembrane protein, membrane p 2e-10
3beh_A355 MLL3241 protein; transmembrane protein, membrane p 3e-10
3beh_A355 MLL3241 protein; transmembrane protein, membrane p 5e-08
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
1orq_C223 Potassium channel; voltage-dependent, KVAP, FAB co 6e-10
1orq_C223 Potassium channel; voltage-dependent, KVAP, FAB co 5e-08
1orq_C223 Potassium channel; voltage-dependent, KVAP, FAB co 2e-05
2f3y_B26 Voltage-dependent L-type calcium channel alpha- 1C 6e-08
2f3y_B26 Voltage-dependent L-type calcium channel alpha- 1C 6e-08
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 2e-05
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 4e-04
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 3rw0_A* Length = 285 Back     alignment and structure
 Score =  276 bits (709), Expect = 2e-84
 Identities = 62/320 (19%), Positives = 123/320 (38%), Gaps = 60/320 (18%)

Query: 890  YIPK-QRLQYKIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQ-PLFYADILDKMNMFFT 947
             +P+   +  +I   V S +F   I  LI++N +T+ ++  +     +       N    
Sbjct: 12   LVPRGSHMYLRITNIVESSFFTKFIIYLIVLNGITMGLETSKTFMQSFGVYTTLFNQIVI 71

Query: 948  TVFALEFVFKLAAFRFKNYFSDAWNVFDFVIVMGSFIDIFSDSPPHAAAKATIPGSHEQT 1007
            T+F +E + ++   R   +F D W++FDF +V  S +   S                   
Sbjct: 72   TIFTIEIILRIYVHRIS-FFKDPWSLFDFFVVAISLVPTSS------------------- 111

Query: 1008 SGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGM 1067
                     R+ RV+RL +L++    +R ++   I     +  V  L+ + F+I+A++  
Sbjct: 112  ----GFEILRVLRVLRLFRLVTAVPQMRKIVSALISVIPGMLSVIALMTLFFYIFAIMAT 167

Query: 1068 QVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASD 1127
            Q+FG+              F T  ++   LF+  T E+W   ++                
Sbjct: 168  QLFGERF---------PEWFGTLGESFYTLFQVMTLESWSMGIVRP-------------- 204

Query: 1128 GNPTNDDNVSCGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDE 1187
                    +      A+ +FI F  + +F++INL VA+ +D    L +       H +DE
Sbjct: 205  --------LMEVYPYAWVFFIPFIFVVTFVMINLVVAICVDAMAILNQKEE---QHIIDE 253

Query: 1188 FIRLWSEYDPDAKGRIKHLD 1207
                    + +     + + 
Sbjct: 254  VQSHEDNINNEIIKLREEIV 273
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 3rw0_A* Length = 285 Back     alignment and structure
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 3rw0_A* Length = 285 Back     alignment and structure
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 3rw0_A* Length = 285 Back     alignment and structure
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 3rw0_A* Length = 285 Back     alignment and structure
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 3rw0_A* Length = 285 Back     alignment and structure
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Length = 229 Back     alignment and structure
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Length = 229 Back     alignment and structure
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Length = 229 Back     alignment and structure
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Length = 229 Back     alignment and structure
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Length = 229 Back     alignment and structure
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A Length = 168 Back     alignment and structure
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A Length = 168 Back     alignment and structure
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A Length = 129 Back     alignment and structure
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A Length = 129 Back     alignment and structure
>3g43_E Voltage-dependent L-type calcium channel subunit alpha-1C; calmodulin-bound, coiled coil, acetylation, methylation, phosphoprotein, polymorphism; 2.10A {Homo sapiens} PDB: 3oxq_E Length = 81 Back     alignment and structure
>3g43_E Voltage-dependent L-type calcium channel subunit alpha-1C; calmodulin-bound, coiled coil, acetylation, methylation, phosphoprotein, polymorphism; 2.10A {Homo sapiens} PDB: 3oxq_E Length = 81 Back     alignment and structure
>4dey_B Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 1vyt_E Length = 106 Back     alignment and structure
>4dex_B Voltage-dependent N-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 2.00A {Rattus norvegicus} Length = 113 Back     alignment and structure
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens} Length = 37 Back     alignment and structure
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens} Length = 37 Back     alignment and structure
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* Length = 514 Back     alignment and structure
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* Length = 514 Back     alignment and structure
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* Length = 514 Back     alignment and structure
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Length = 355 Back     alignment and structure
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Length = 355 Back     alignment and structure
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Length = 355 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A Length = 223 Back     alignment and structure
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A Length = 223 Back     alignment and structure
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A Length = 223 Back     alignment and structure
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B Length = 26 Back     alignment and structure
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B Length = 26 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1643
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 100.0
3rvy_A285 ION transport protein; tetrameric ION channel, vol 99.97
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 99.97
3rvy_A285 ION transport protein; tetrameric ION channel, vol 99.94
4dck_A168 Sodium channel protein type 5 subunit alpha; IQ-mo 99.93
2r9r_B514 Paddle chimera voltage gated potassium channel KV; 99.89
2kav_A129 Sodium channel protein type 2 subunit alpha; volta 99.89
4dck_A168 Sodium channel protein type 5 subunit alpha; IQ-mo 99.8
4f4l_A112 ION transport protein; alpha helical membrane prot 99.79
2kav_A129 Sodium channel protein type 2 subunit alpha; volta 99.77
2r9r_B514 Paddle chimera voltage gated potassium channel KV; 99.75
4f4l_A112 ION transport protein; alpha helical membrane prot 99.73
3beh_A355 MLL3241 protein; transmembrane protein, membrane p 99.68
3g43_E81 Voltage-dependent L-type calcium channel subunit a 99.61
2be6_D37 Voltage-dependent L-type calcium channel alpha-1C; 99.6
1ors_C132 Potassium channel; voltage-dependent, voltage sens 99.55
1ors_C132 Potassium channel; voltage-dependent, voltage sens 99.53
3beh_A355 MLL3241 protein; transmembrane protein, membrane p 99.49
1orq_C223 Potassium channel; voltage-dependent, KVAP, FAB co 99.47
1orq_C223 Potassium channel; voltage-dependent, KVAP, FAB co 99.41
2f3y_B26 Voltage-dependent L-type calcium channel alpha- 1C 99.13
2kyh_A147 KVAP, voltage-gated potassium channel; ION channel 98.88
3g43_E81 Voltage-dependent L-type calcium channel subunit a 98.82
3dvk_B23 Voltage-dependent R-type calcium channel subunit; 98.8
2kyh_A147 KVAP, voltage-gated potassium channel; ION channel 98.77
3dve_B23 Voltage-dependent N-type calcium channel subunit; 98.65
2be6_D37 Voltage-dependent L-type calcium channel alpha-1C; 98.33
1qg9_A26 Protein (sodium channel protein, brain II alpha su 97.91
4dey_B106 Voltage-dependent L-type calcium channel subunit; 97.88
3bxl_B26 CAM, voltage-dependent R-type calcium channel subu 97.87
2lcm_A28 Voltage-dependent N-type calcium channel subunit; 97.68
4dex_B113 Voltage-dependent N-type calcium channel subunit; 97.35
2f3y_B26 Voltage-dependent L-type calcium channel alpha- 1C 97.12
2a9h_A155 Voltage-gated potassium channel; potassium channel 96.92
3dvk_B23 Voltage-dependent R-type calcium channel subunit; 96.81
1qg9_A26 Protein (sodium channel protein, brain II alpha su 96.08
3dve_B23 Voltage-dependent N-type calcium channel subunit; 96.02
2ih3_C122 Voltage-gated potassium channel; ION channel D-ami 95.92
2a9h_A155 Voltage-gated potassium channel; potassium channel 95.59
3bxl_B26 CAM, voltage-dependent R-type calcium channel subu 95.31
2ih3_C122 Voltage-gated potassium channel; ION channel D-ami 93.85
1byy_A53 Protein (sodium channel alpha-subunit); membrane p 89.03
2ktg_A85 Calmodulin, putative; ehcam, Ca-binding protein, p 80.04
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Back     alignment and structure
Probab=100.00  E-value=5.1e-37  Score=348.70  Aligned_cols=224  Identities=24%  Similarity=0.497  Sum_probs=194.2

Q ss_pred             eeeeeeeccchhhhhhHHHHhhhheeeeeeccCChhHHHHHHHHhHHHHHHHHHHHHHHhhhcc-cccccccccceeehh
Q psy12306        899 KIWWFVTSQYFEYTIFCLIMINTLTLAMKFYRQPLFYADILDKMNMFFTTVFALEFVFKLAAFR-FKNYFSDAWNVFDFV  977 (1643)
Q Consensus       899 ~~~~iv~s~~Fe~~I~~lIllN~i~la~e~~~~~~~~~~~l~~in~~ft~iF~iE~iLKi~a~g-~~~Yf~~~wNifDfi  977 (1643)
                      +++++++|++|++++.++|++|+++++++++++++.+...++.+|.+|+++|++|+++|+++.| +++|++++||++|++
T Consensus         4 ~~~~iv~~~~f~~~i~~~I~ln~i~l~~~~~~~~~~~~~~l~~~e~~~~~iF~~E~~lri~~~~~~~~y~~~~wni~D~~   83 (229)
T 4dxw_A            4 FFSSLKDNRIFQFTVVSIIILNAVLIGATTYELDPLFLETIHLLDYGITIFFVIEILIRFIGEKQKADFFKSGWNIFDTV   83 (229)
T ss_dssp             SSTTTTTCHHHHHHHHHHHHHHHHSTTTCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------CHHHHHHHH
T ss_pred             HHHHHHcCchHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHHhcCCcHHHHHH
Confidence            5778999999999999999999999999999999999999999999999999999999999986 579999999999999


Q ss_pred             hHhHHHHHHhcCCCccccccccCCCCCcccCcceeeeeeeehhhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12306        978 IVMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRVMRLIKLLSRGEGIRTLLWTFIKSFQALPYVALLIVM 1057 (1643)
Q Consensus       978 vVi~sii~ii~~~~~~~~~~~~~~g~~~~~~~~~~i~~lRl~RvlRllrLi~~~~~lr~Ll~tl~~S~~~L~~v~lLl~l 1057 (1643)
                      ++++++++..              +       ...++.+|++|++|++|++|+.+++|.++.++.+|.|++.++++++++
T Consensus        84 ~v~~~~i~~~--------------~-------~~~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~s~~~l~~~~~~l~~  142 (229)
T 4dxw_A           84 IVAISLIPIP--------------N-------NSSFLVLRLLRIFRVLRLISVIPELKQIIEAILESVRRVFFVSLLLFI  142 (229)
T ss_dssp             HHHHTTCC-----------------------------CCTTHHHHHHTTHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcC--------------c-------cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998765432              1       113567899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccccccCCCCCCCCCCCCHhHHHHhhhccccccccHHHHHhhcCCCCCcccCCCCCCCCCCCCCCC
Q psy12306       1058 LFFIYAVIGMQVFGKIALVFGGGIHRNNNFQTFPQAVLVLFRSATGEAWQDIMLDCSNRPSEVKCDAASDGNPTNDDNVS 1137 (1643)
Q Consensus      1058 ~~fIfAiiGmqlFg~~~~~~~~~i~~~~NF~tf~~A~ltLF~v~Tge~W~~im~~~~~~~~~~~Cd~~~~~~~~~~~~~~ 1137 (1643)
                      ++++||++||++||+..         +.||+|+++|++++|+++|||||+++|++++...                    
T Consensus       143 ~~~ifa~~g~~lf~~~~---------~~~F~~~~~a~~~lf~~~t~~~w~~i~~~~~~~~--------------------  193 (229)
T 4dxw_A          143 ILYIYATMGAILFGNDD---------PSRWGDLGISLITLFQVLTLSSWETVMLPMQEIY--------------------  193 (229)
T ss_dssp             HHHHHHHHHHHHTTTTS---------CTTTSSHHHHHHHHHHHHTTSSTHHHHHHHHTTC--------------------
T ss_pred             HHHHHHHHHHHHhccCC---------cccccCHHHHHHHHHHHHccCCHHHHHHHHHHhC--------------------
Confidence            99999999999999742         3589999999999999999999999999988542                    


Q ss_pred             cCcceeeeeeehhhHHHHHHHHHHHHHHHHHhhhhhhh
Q psy12306       1138 CGSDIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTR 1175 (1643)
Q Consensus      1138 Cgs~~a~iyFisf~ii~~fiilNLfVAvIidnF~~~~~ 1175 (1643)
                         +++.+||++|+++++++++|||+|+|+|||++.++
T Consensus       194 ---~~~~~~f~~~~~i~~~i~lNlfiavi~~~f~~~~~  228 (229)
T 4dxw_A          194 ---WWSWVYFFSFIIICSITILNLVIAILVDVVIQKKL  228 (229)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence               36678999999999999999999999999997644
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A* Back     alignment and structure
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Back     alignment and structure
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A* Back     alignment and structure
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A Back     alignment and structure
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* Back     alignment and structure
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A Back     alignment and structure
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A Back     alignment and structure
>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus} Back     alignment and structure
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A Back     alignment and structure
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* Back     alignment and structure
>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus} Back     alignment and structure
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Back     alignment and structure
>3g43_E Voltage-dependent L-type calcium channel subunit alpha-1C; calmodulin-bound, coiled coil, acetylation, methylation, phosphoprotein, polymorphism; 2.10A {Homo sapiens} PDB: 3oxq_E Back     alignment and structure
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens} Back     alignment and structure
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1 Back     alignment and structure
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1 Back     alignment and structure
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Back     alignment and structure
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A Back     alignment and structure
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A Back     alignment and structure
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix} Back     alignment and structure
>3g43_E Voltage-dependent L-type calcium channel subunit alpha-1C; calmodulin-bound, coiled coil, acetylation, methylation, phosphoprotein, polymorphism; 2.10A {Homo sapiens} PDB: 3oxq_E Back     alignment and structure
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix} Back     alignment and structure
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens} Back     alignment and structure
>4dey_B Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 1vyt_E Back     alignment and structure
>2lcm_A Voltage-dependent N-type calcium channel subunit; voltage sensor peptide, membrane protein; NMR {Homo sapiens} Back     alignment and structure
>4dex_B Voltage-dependent N-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 2.00A {Rattus norvegicus} Back     alignment and structure
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1 Back     alignment and structure
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B Back     alignment and structure
>3dve_B Voltage-dependent N-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.35A {Oryctolagus cuniculus} PDB: 3dvj_B Back     alignment and structure
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ... Back     alignment and structure
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1 Back     alignment and structure
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ... Back     alignment and structure
>1byy_A Protein (sodium channel alpha-subunit); membrane protein; NMR {Rattus norvegicus} SCOP: j.12.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1643
d1orsc_132 f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aer 4e-12
d1orsc_132 f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aer 6e-10
d1orsc_132 f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aer 2e-06
d1orsc_132 f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aer 1e-05
>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 132 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel KVAP
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 63.0 bits (153), Expect = 4e-12
 Identities = 12/147 (8%), Positives = 45/147 (30%), Gaps = 20/147 (13%)

Query: 903  FVTSQYFEYTIFCLIMINTLTLAMKFYRQ-PLFYADILDKMNMFFTTVFALEFVFKLAAF 961
             +     E  +    +++ + + +++  Q    Y   L  +++    +   ++ ++    
Sbjct: 2    VMEHPLVELGVSYAALLSVIVVVVEYTMQLSGEYLVRLYLVDLILVIILWADYAYRAYKS 61

Query: 962  RFKNYFSDAWNVFDFVIVMGSFIDIFSDSPPHAAAKATIPGSHEQTSGRLSINFFRLFRV 1021
                       +++   ++ + +    +                       +  FRL R+
Sbjct: 62   G-DPAGYVKKTLYEIPALVPAGLLALIEGHLA------------------GLGLFRLVRL 102

Query: 1022 MRLIKLLSRGEGIRTLLWTFIKSFQAL 1048
            +R +++L         L     +   L
Sbjct: 103  LRFLRILLIISRGSKFLSAIADAADKL 129
>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 132 Back     information, alignment and structure
>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 132 Back     information, alignment and structure
>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 132 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1643
d1orsc_132 Potassium channel KVAP {Archaeon Aeropyrum pernix 99.55
d1orsc_132 Potassium channel KVAP {Archaeon Aeropyrum pernix 99.52
d2pq3a173 Calmodulin {Rattus norvegicus [TaxId: 10116]} 92.38
d1avsa_81 Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} 91.19
d2h8pc157 Potassium channel protein {Streptomyces coelicolor 90.91
d1f54a_77 Calmodulin {Baker's yeast (Saccharomyces cerevisia 90.39
d1oqpa_77 Caltractin (centrin 2) {Green algae (Chlamydomonas 87.42
d1fw4a_65 Calmodulin {Cow (Bos taurus) [TaxId: 9913]} 84.85
d2fcea161 Calmodulin {Cow (Bos taurus) [TaxId: 9913]} 84.65
d2opoa181 Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta 83.87
d1wrka182 Troponin C {Human (Homo sapiens), cardiac isoform 82.94
d1wlza183 DJ-1-binding protein, DJBP {Human (Homo sapiens) [ 80.52
>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel KVAP
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.55  E-value=2.2e-15  Score=152.49  Aligned_cols=128  Identities=12%  Similarity=0.094  Sum_probs=106.3

Q ss_pred             ccccccchhhhHhHHHHHHHHHHHhhccCC-CccchhhhhhhhhHHHHHHHHHHHhhhhcccccchhhhhHHHHHHHHHH
Q psy12306        255 KAVKSQGFYWLIIILVFLNTGVLATEHYQQ-PKWLDSFQEVTNIFFVALFTMEMTLKMYSLGFQEVTNIFFVALFTMEMT  333 (1643)
Q Consensus       255 ~iv~s~~F~~~i~~~IllN~i~la~e~~~~-~~~~~~~l~~~n~~~~~lf~~e~~~~~~~~~~~~~~~~~f~~iF~iE~i  333 (1643)
                      ++++||.|+++++++|++|++++++|++++ +++....++                         +.|++|+++|++|++
T Consensus         1 d~i~~p~~e~~i~~lillnvi~~~let~~~~~~~~~~~l~-------------------------~~e~v~~~iF~~E~~   55 (132)
T d1orsc_           1 DVMEHPLVELGVSYAALLSVIVVVVEYTMQLSGEYLVRLY-------------------------LVDLILVIILWADYA   55 (132)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHH-------------------------HHHHHHHHHHHHHHH
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHhccccchhhhHHHH-------------------------HHHHHHHHHHHHHHH
Confidence            367899999999999999999999999765 443333333                         356777777999999


Q ss_pred             HhhheecccccccccccccceeeeehhhhhHHhhhccCCCCCcchhhHHHHHhHhhhhhhchHhHHHHHHHHHHHHHHH
Q psy12306        334 LKMYSLGFQGYFVSLFNRFDCFVVIGSIGEMILTRTNIMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSI  412 (1643)
Q Consensus       334 LKi~a~G~~~Yf~~~wNifD~~vvl~sii~lil~~~~~~~~~~l~vLR~~RlLRi~kl~r~~~~l~~L~~ti~~s~~~l  412 (1643)
                      +|+++.|. +|....||++|+++++++++........    ..++++|.+|++|++|+.|..++++.+++++.+|.+++
T Consensus        56 lrl~~~~~-~~~~~~~~~iDl~ai~p~~~~~~~~~~~----~~lr~lR~~R~~R~lrl~~~~~~~~~ll~ai~~s~~~l  129 (132)
T d1orsc_          56 YRAYKSGD-PAGYVKKTLYEIPALVPAGLLALIEGHL----AGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADKL  129 (132)
T ss_dssp             HHHHHTTS-TTTTTTTCGGGTGGGSCHHHHHHHHHHH----HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCc-cceeCCcchHHHHHHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999884 4555688999999999998877654331    35899999999999999999999999999999999876
>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Back     information, alignment and structure
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Back     information, alignment and structure
>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Back     information, alignment and structure
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure