Psyllid ID: psy12315

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Protein Sequence
MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSLA
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMsahfdrdvvalpgiskyfkhasdeESEHAHKLIKYLNKrggtlklvdvkaparqewgttEEAFSHALQLEKDVNQVIIYFFTSLA
Flexible Loop (DISEMBL)
mavsqvrqnfhaeteekinkQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSLA
Low Complexity Region (SEG)
MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSLA
Disordered region (IsUnstruct)
*****************INKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHA*******AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT***
Disordered Region (DISOPRED)
**VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSLA
Disordered Region (DISEMBL)
**********HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKH*********HKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSLA
Disordered Region (DISPRO)
*******QNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSLA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSLA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	120	2.2.26 [Sep-21-2011]
P42577	174	Soma ferritin OS=Lymnaea	N/A	N/A	0.941	0.649	0.646	1e-37
P85837	174	Ferritin, heavy subunit O	N/A	N/A	0.916	0.632	0.627	1e-34
P85838	174	Ferritin, heavy subunit O	N/A	N/A	0.916	0.632	0.618	2e-34
P49948	176	Ferritin heavy chain A OS	N/A	N/A	0.916	0.625	0.609	2e-33
Q7SXA6	177	Ferritin heavy chain, ooc	N/A	N/A	0.916	0.621	0.618	3e-33
P07229	176	Ferritin, higher subunit	N/A	N/A	0.916	0.625	0.6	1e-32
P17663	176	Ferritin heavy chain B OS	N/A	N/A	0.916	0.625	0.6	2e-32
P07798	176	Ferritin, middle subunit	N/A	N/A	0.925	0.630	0.585	7e-32
P49946	177	Ferritin, heavy subunit O	N/A	N/A	0.925	0.627	0.594	1e-31
P29389	186	Ferritin heavy chain OS=C	no	N/A	0.916	0.591	0.590	3e-31

>sp|P42577|FRIS_LYMST Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2

 Score =  154 bits (390), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/113 (64%), Positives = 87/113 (76%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           M+VSQ RQN+HAE+E  IN+QIN+ELYASY Y SM+ +FDRD VALPG  K+FKH S+EE
Sbjct: 1   MSVSQARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            EHA KL+KY NKRGG + L D+K P R EWGT  EA   ALQLEK VNQ ++
Sbjct: 61  REHAEKLMKYQNKRGGRIVLQDIKKPDRDEWGTGLEAMQVALQLEKSVNQSLL 113

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
Lymnaea stagnalis (taxid: 6523)
EC: 1EC: .EC: 1EC: 6EC: .EC: 3EC: .EC: 1

>sp|P85837|FRIH_TRENE Ferritin, heavy subunit OS=Trematomus newnesi PE=1 SV=1

 Score =  145 bits (365), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 84/110 (76%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH + E  IN+QINLELYASY YLSM+ +FDRD VALPG + +FKH S+EE EH
Sbjct: 3   SQVRQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKHQSEEEREH 62

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A KL+K  N+RGG + L DVK P R EWG+  +A   ALQLEK+VNQ ++
Sbjct: 63  AEKLMKQQNQRGGRIFLQDVKKPDRDEWGSGLDALECALQLEKNVNQSLL 112

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney.

Trematomus newnesi (taxid: 35730)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P85838|FRIH_TREBE Ferritin, heavy subunit OS=Trematomus bernacchii PE=1 SV=1

 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 84/110 (76%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH + E  IN+QINLELYASY YLSM+ +FDRD VALPG + +FK  S+EE EH
Sbjct: 3   SQVRQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKQQSEEEREH 62

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A KL+K+ N+RGG + L DVK P R EWG+  +A   ALQLEK+VNQ ++
Sbjct: 63  AEKLLKFQNQRGGRIFLQDVKKPDRDEWGSGLDALECALQLEKNVNQSLL 112

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney.

Trematomus bernacchii (taxid: 40690)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P49948|FRIHA_XENLA Ferritin heavy chain A OS=Xenopus laevis GN=fth1-a PE=2 SV=1

 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 82/110 (74%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH++ E  IN+ +N+E+YASYVYLSMS +FDRD VAL  ++K+FK  S EE EH
Sbjct: 3   SQVRQNFHSDCEAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREH 62

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A K +KY NKRGG + L D+K P R EWG T EA   ALQLEK VNQ ++
Sbjct: 63  AEKFLKYQNKRGGRVVLQDIKKPERDEWGNTLEATQAALQLEKTVNQALL 112

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|Q7SXA6|FRIH3_XENLA Ferritin heavy chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 80/110 (72%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQNFH E E  IN+Q+N+ELYASYVYLSMS +FDRD VAL   +KYF H S EE EH
Sbjct: 3   SQIRQNFHQECEAAINRQVNMELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREH 62

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A KL+K  N+RGG L L D+K P R EW    EA   +LQLEK+VNQ I+
Sbjct: 63  AEKLMKMQNQRGGRLFLQDIKKPERDEWANGLEALECSLQLEKNVNQSIL 112

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P07229|FRI1_LITCT Ferritin, higher subunit OS=Lithobates catesbeiana PE=1 SV=3

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/110 (60%), Positives = 80/110 (72%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH + E  IN+ +N+ELYASY YLSM+ +FDRD +AL  ++K+FK  S EE EH
Sbjct: 3   SQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREH 62

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A KL+K  NKRGG + L DVK P R EWG T EA   ALQLEK VNQ ++
Sbjct: 63  AEKLMKDQNKRGGRIVLQDVKKPERDEWGNTLEAMQAALQLEKTVNQALL 112

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Lithobates catesbeiana (taxid: 8400)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P17663|FRIHB_XENLA Ferritin heavy chain B OS=Xenopus laevis GN=fth1-b PE=2 SV=2

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/110 (60%), Positives = 81/110 (73%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNF+++ E  IN+ +NLE+YASYVYLSMS +FDRD VAL  ++K+FK  S EE EH
Sbjct: 3   SQVRQNFNSDCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREH 62

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A K +KY NKRGG + L D+K P R EW  T EA   ALQLEK VNQ ++
Sbjct: 63  AEKFLKYQNKRGGRVVLQDIKKPERDEWSNTLEAMQAALQLEKTVNQALL 112

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P07798|FRI2_LITCT Ferritin, middle subunit OS=Lithobates catesbeiana PE=1 SV=3

 Score =  135 bits (340), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%)

Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
           VSQVRQN+H++ E  +N+ +NLELYASY Y SM A FDRD VAL  ++++FK  S EE E
Sbjct: 2   VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEERE 61

Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HA K +KY NKRGG + L D+K P R EWG T EA   ALQLEK VNQ ++
Sbjct: 62  HAEKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALL 112

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Lithobates catesbeiana (taxid: 8400)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P49946|FRIH_SALSA Ferritin, heavy subunit OS=Salmo salar PE=2 SV=1

 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 81/111 (72%)

Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
            SQVRQNFH + E  IN+QINLELYASYVYLSM+ +FDRD  AL   +K+FK+ S EE E
Sbjct: 2   TSQVRQNFHQDCEAAINRQINLELYASYVYLSMAYYFDRDDQALHNFAKFFKNQSHEERE 61

Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HA KL+K  N+RGG + L DVK P + EWG+  EA   +LQLEK VNQ ++
Sbjct: 62  HAEKLMKVQNQRGGRIFLQDVKKPEKDEWGSGVEALESSLQLEKSVNQSLL 112

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Salmo salar (taxid: 8030)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P29389|FRIH_CRIGR Ferritin heavy chain OS=Cricetulus griseus GN=FTH1 PE=2 SV=2

 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 79/110 (71%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE EH
Sbjct: 12  SQVRQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREH 71

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A KL+K  N+RGG + L D+K P R +W +   A   AL LEK VNQ ++
Sbjct: 72  AEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLL 121

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney.

Cricetulus griseus (taxid: 10029)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
46561742	172	putative ferritin GF2 [Homalodisca vitri	0.941	0.656	0.672	9e-39
149689086	172	ferritin [Triatoma infestans]	0.941	0.656	0.672	2e-38
53830706	172	putative ferritin [Oncometopia nigricans	0.941	0.656	0.663	3e-38
241913770	173	ferritin-like protein [Pinctada maxima]	0.941	0.653	0.654	7e-37
33333949	206	ferritin-like protein [Pinctada fucata]	0.941	0.548	0.646	1e-36
91081285	172	PREDICTED: similar to ferritin GF1 [Trib	0.983	0.686	0.610	2e-36
325296839	172	soma ferritin [Aplysia californica] gi|9	0.941	0.656	0.637	3e-36
1169742	174	RecName: Full=Soma ferritin gi|9650|emb|	0.941	0.649	0.646	5e-36
345105455	171	ferritin 1 [Argopecten irradians] gi|345	0.941	0.660	0.672	6e-36
405965382	171	Soma ferritin [Crassostrea gigas]	0.941	0.660	0.637	1e-35

>gi|46561742|gb|AAT01076.1| putative ferritin GF2 [Homalodisca vitripennis]

 Score =  164 bits (414), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 92/113 (81%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           M+V+QVRQNFH ++E  INKQIN+ELYASYVYLSM+ +FDRD VAL GIS+YF+ +SDEE
Sbjct: 1   MSVNQVRQNFHEDSENGINKQINMELYASYVYLSMAYYFDRDDVALHGISEYFRKSSDEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            EHA KL+KYLNKRGG + L DVK P R +WG  EEAF+ AL LEKDVN  ++
Sbjct: 61  REHAQKLMKYLNKRGGRIVLFDVKQPPRNDWGNAEEAFTAALHLEKDVNTSLL 113

Source: Homalodisca vitripennis

Species: Homalodisca vitripennis

Genus: Homalodisca

Family: Cicadellidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|149689086|gb|ABR27877.1| ferritin [Triatoma infestans]

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 91/113 (80%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           MAVSQVRQNFH ++E  IN++IN+ELYASYVYLSM+ HFDRD +AL G  KYFK AS+EE
Sbjct: 1   MAVSQVRQNFHTDSENAINQRINMELYASYVYLSMAYHFDRDDIALEGFHKYFKKASEEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            EHA KL+KYLNKRGG + L DV  PA+ +WGT EEA + ALQLEKDVN  ++
Sbjct: 61  REHAMKLMKYLNKRGGRILLKDVSQPAKNDWGTAEEAVASALQLEKDVNMSLL 113

Source: Triatoma infestans

Species: Triatoma infestans

Genus: Triatoma

Family: Reduviidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|53830706|gb|AAU95196.1| putative ferritin [Oncometopia nigricans]

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 75/113 (66%), Positives = 92/113 (81%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           M+++QVRQNFH ++E  INKQIN+ELYASYVYLSM+ +FDRD VAL GIS+YF+ +SDEE
Sbjct: 1   MSLNQVRQNFHEDSENGINKQINMELYASYVYLSMAYYFDRDDVALHGISEYFRKSSDEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            EHA KL+KYLNKRGG + L DVK P R +W   EEAF+ ALQLEKDVN  ++
Sbjct: 61  REHAQKLMKYLNKRGGKIVLFDVKQPPRNDWSNAEEAFTAALQLEKDVNTSLL 113

Source: Oncometopia nigricans

Species: Oncometopia nigricans

Genus: Oncometopia

Family: Cicadellidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241913770|gb|ACS72281.1| ferritin-like protein [Pinctada maxima]

 Score =  157 bits (397), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 74/113 (65%), Positives = 87/113 (76%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           MA+SQ RQNFH E+E  IN+QIN+ELYASY Y SMS +FDRD VALPG +KYFKH+SDEE
Sbjct: 1   MALSQPRQNFHVESEAGINRQINMELYASYTYQSMSFYFDRDDVALPGFAKYFKHSSDEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            EHA KL+KY NKRGG + L D+K P R +WG   EA   ALQLEK VNQ ++
Sbjct: 61  REHAEKLMKYQNKRGGRIVLQDIKKPDRDDWGNGLEAMQVALQLEKSVNQALL 113

Source: Pinctada maxima

Species: Pinctada maxima

Genus: Pinctada

Family: Pteriidae

Order: Pterioida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|33333949|gb|AAQ12076.1| ferritin-like protein [Pinctada fucata]

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/113 (64%), Positives = 88/113 (77%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           MA+SQ RQNFH E+E  IN+QIN+ELYASY Y SMS +FDRD VALPG +K+FKH+SDEE
Sbjct: 1   MALSQPRQNFHVESEAGINRQINMELYASYTYQSMSFYFDRDDVALPGFAKFFKHSSDEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            EHA KL+KY NKRGG + L D+K P R +WGT  E+   ALQLEK VNQ ++
Sbjct: 61  REHAEKLMKYQNKRGGRIVLQDIKKPDRDDWGTGLESMQVALQLEKSVNQSLL 113

Source: Pinctada fucata

Species: Pinctada fucata

Genus: Pinctada

Family: Pteriidae

Order: Pterioida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|91081285|ref|XP_967895.1| PREDICTED: similar to ferritin GF1 [Tribolium castaneum] gi|270005213|gb|EFA01661.1| hypothetical protein TcasGA2_TC007233 [Tribolium castaneum]

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/118 (61%), Positives = 89/118 (75%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           MA SQVRQNFH + E+ INKQIN+EL A Y YLSM+ HF RD VALPG+ KYFK  SDEE
Sbjct: 1   MAQSQVRQNFHKDCEDAINKQINVELNAFYTYLSMAYHFQRDDVALPGLYKYFKACSDEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS 118
            +HAHKL++YLNKRGG L L D+ AP +Q+WGT +EA   AL LEK VN+ ++   ++
Sbjct: 61  RDHAHKLMEYLNKRGGRLALTDIPAPEKQDWGTAQEAMCAALDLEKRVNESLLVLHST 118

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|325296839|ref|NP_001191661.1| soma ferritin [Aplysia californica] gi|94471616|gb|ABF21074.1| soma ferritin [Aplysia californica]

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 72/113 (63%), Positives = 88/113 (77%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           M+VSQ RQN+H+E+E  +N+QIN+ELYASY Y SMS +FDRD VALPG SK+FK +SDEE
Sbjct: 1   MSVSQCRQNYHSESEAGVNRQINMELYASYTYQSMSFYFDRDDVALPGFSKFFKKSSDEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            EHA KL+K+ NKRGG + L D+K P R EWGT  EA   ALQLEK VNQ ++
Sbjct: 61  REHAEKLMKFQNKRGGRVVLQDIKKPDRDEWGTGLEAMQVALQLEKSVNQSLL 113

Source: Aplysia californica

Species: Aplysia californica

Genus: Aplysia

Family: Aplysiidae

Class: Gastropoda

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|1169742|sp|P42577.2|FRIS_LYMST RecName: Full=Soma ferritin gi|9650|emb|CAA40096.1| snail soma ferritin [Lymnaea stagnalis] gi|259469|gb|AAB24081.1| ferritin [Lymnaea stagnalis, soma, Peptide, 174 aa]

 Score =  154 bits (390), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 73/113 (64%), Positives = 87/113 (76%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           M+VSQ RQN+HAE+E  IN+QIN+ELYASY Y SM+ +FDRD VALPG  K+FKH S+EE
Sbjct: 1   MSVSQARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            EHA KL+KY NKRGG + L D+K P R EWGT  EA   ALQLEK VNQ ++
Sbjct: 61  REHAEKLMKYQNKRGGRIVLQDIKKPDRDEWGTGLEAMQVALQLEKSVNQSLL 113

Source: Lymnaea stagnalis

Species: Lymnaea stagnalis

Genus: Lymnaea

Family: Lymnaeidae

Class: Gastropoda

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|345105455|gb|AEN71558.1| ferritin 1 [Argopecten irradians] gi|345105457|gb|AEN71559.1| ferritin 1 [Argopecten irradians]

 Score =  154 bits (389), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 85/113 (75%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           MAVSQ RQNFHAETE  IN+QINLELYA YVY SMS +FDRD VALPG +KYFK ASDEE
Sbjct: 1   MAVSQPRQNFHAETEAGINRQINLELYAGYVYQSMSFYFDRDDVALPGFAKYFKKASDEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            EHA K +KY NKRGG + L D+K   R EWGT  +A   AL LEK VNQ ++
Sbjct: 61  REHAEKFMKYQNKRGGRVVLQDIKKADRDEWGTGLDAMQVALTLEKQVNQSLL 113

Source: Argopecten irradians

Species: Argopecten irradians

Genus: Argopecten

Family: Pectinidae

Order: Pectinoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|405965382|gb|EKC30759.1| Soma ferritin [Crassostrea gigas]

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/113 (63%), Positives = 86/113 (76%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           M+ SQ RQNFH E+E  IN+QIN+ELYASY Y SM+ +FDRD VALPG  K+FKH+SDEE
Sbjct: 1   MSQSQPRQNFHEESEAGINRQINMELYASYTYQSMALYFDRDDVALPGFHKFFKHSSDEE 60

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            EHA KL+KY NKRGG + L D+K P R EWGT  +A   ALQLEK VNQ ++
Sbjct: 61  REHAEKLMKYQNKRGGRIVLQDIKKPDRDEWGTGLDAMQIALQLEKSVNQSLL 113

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
UNIPROTKB|P29389	186	FTH1 "Ferritin heavy chain" [C	0.916	0.591	0.590	1.6e-29
UNIPROTKB|Q66HI5	182	Fth1 "Ferritin" [Rattus norveg	0.916	0.604	0.590	1.6e-29
UNIPROTKB|Q9XT73	183	FTH1 "Ferritin heavy chain" [T	0.916	0.601	0.590	2.1e-29
MGI|MGI:95588	182	Fth1 "ferritin heavy chain 1"	0.916	0.604	0.590	2.1e-29
RGD|2635	182	Fth1 "ferritin, heavy polypept	0.916	0.604	0.590	2.1e-29
UNIPROTKB|I3LR69	181	FTH1 "Ferritin" [Sus scrofa (t	0.916	0.607	0.590	2.7e-29
ZFIN|ZDB-GENE-000831-2	177	fth1a "ferritin, heavy polypep	0.916	0.621	0.581	2.7e-29
UNIPROTKB|Q95MP7	183	FTH1 "Ferritin heavy chain" [C	0.916	0.601	0.590	3.4e-29
WB|WBGene00001501	170	ftn-2 [Caenorhabditis elegans	0.925	0.652	0.567	3.4e-29
UNIPROTKB|Q9TYS3	170	ftn-2 "Ferritin" [Caenorhabdit	0.925	0.652	0.567	3.4e-29

UNIPROTKB|P29389 FTH1 "Ferritin heavy chain" [Cricetulus griseus (taxid:10029)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 65/110 (59%), Positives = 79/110 (71%)

Query:     4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
             SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE EH
Sbjct:    12 SQVRQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREH 71

Query:    64 AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             A KL+K  N+RGG + L D+K P R +W +   A   AL LEK VNQ ++
Sbjct:    72 AEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLL 121

GO:0006955 "immune response" evidence=ISS

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

UNIPROTKB|Q66HI5 Fth1 "Ferritin" [Rattus norvegicus (taxid:10116)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 65/110 (59%), Positives = 79/110 (71%)

Query:     4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
             SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE EH
Sbjct:     7 SQVRQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREH 66

Query:    64 AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             A KL+K  N+RGG + L D+K P R +W +   A   AL LEK VNQ ++
Sbjct:    67 AEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLL 116

GO:0005739 "mitochondrion" evidence=IEA

GO:0006826 "iron ion transport" evidence=IEA

GO:0006880 "intracellular sequestering of iron ion" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0048147 "negative regulation of fibroblast proliferation" evidence=IEA

UNIPROTKB|Q9XT73 FTH1 "Ferritin heavy chain" [Trichosurus vulpecula (taxid:9337)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 65/110 (59%), Positives = 80/110 (72%)

Query:     4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
             SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE EH
Sbjct:     7 SQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREH 66

Query:    64 AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             A KL+K  N+RGG + L D+K P R +W +   A   AL LEK+VNQ ++
Sbjct:    67 AEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKNVNQSLL 116

GO:0006955 "immune response" evidence=ISS

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

MGI|MGI:95588 Fth1 "ferritin heavy chain 1" [Mus musculus (taxid:10090)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 65/110 (59%), Positives = 78/110 (70%)

Query:     4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
             SQVRQN+H + E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE EH
Sbjct:     7 SQVRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREH 66

Query:    64 AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             A KL+K  N+RGG + L D+K P R +W +   A   AL LEK VNQ ++
Sbjct:    67 AEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLL 116

GO:0004322 "ferroxidase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0006826 "iron ion transport" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0006880 "intracellular sequestering of iron ion" evidence=ISO

GO:0008199 "ferric iron binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0048147 "negative regulation of fibroblast proliferation" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0060547 "negative regulation of necrotic cell death" evidence=ISO

RGD|2635 Fth1 "ferritin, heavy polypeptide 1" [Rattus norvegicus (taxid:10116)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 65/110 (59%), Positives = 79/110 (71%)

Query:     4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
             SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE EH
Sbjct:     7 SQVRQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREH 66

Query:    64 AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             A KL+K  N+RGG + L D+K P R +W +   A   AL LEK VNQ ++
Sbjct:    67 AEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMRCALHLEKSVNQSLL 116

GO:0004322 "ferroxidase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005575 "cellular_component" evidence=ND

GO:0005739 "mitochondrion" evidence=ISO

GO:0006826 "iron ion transport" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0006880 "intracellular sequestering of iron ion" evidence=ISO

GO:0006955 "immune response" evidence=ISS

GO:0008199 "ferric iron binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

GO:0048147 "negative regulation of fibroblast proliferation" evidence=ISO;IDA

GO:0060547 "negative regulation of necrotic cell death" evidence=IMP

UNIPROTKB|I3LR69 FTH1 "Ferritin" [Sus scrofa (taxid:9823)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 65/110 (59%), Positives = 79/110 (71%)

Query:     4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
             SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE EH
Sbjct:     7 SQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREH 66

Query:    64 AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             A KL+K  N+RGG + L D+K P R +W     A   AL LEK+VNQ ++
Sbjct:    67 AEKLMKLQNQRGGRIFLQDIKKPERDDWENGLTAMECALHLEKNVNQSLL 116

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0006826 "iron ion transport" evidence=IEA

ZFIN|ZDB-GENE-000831-2 fth1a "ferritin, heavy polypeptide 1a" [Danio rerio (taxid:7955)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 64/110 (58%), Positives = 79/110 (71%)

Query:     4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
             SQVRQNF    E  +N+QIN+ELYASYVYLSMS +FDRD  AL   +K+F+H S EE EH
Sbjct:     3 SQVRQNFEEACEAAVNRQINMELYASYVYLSMSYYFDRDDQALHNFAKFFRHQSHEEREH 62

Query:    64 AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             A KL+K+ N+RGG + L DVK P + EWG+  EA   ALQLEK VN  ++
Sbjct:    63 AEKLMKFQNQRGGRIFLQDVKKPEKDEWGSGVEALECALQLEKSVNHSLL 112

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0006826 "iron ion transport" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q95MP7 FTH1 "Ferritin heavy chain" [Canis lupus familiaris (taxid:9615)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 65/110 (59%), Positives = 78/110 (70%)

Query:     4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
             SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE EH
Sbjct:     7 SQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREH 66

Query:    64 AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             A KL+K  N+RGG + L D+K P R +W     A   AL LEK VNQ ++
Sbjct:    67 AEKLMKLQNQRGGRIFLQDIKKPDRDDWENGLNAMECALHLEKSVNQSLL 116

GO:0006955 "immune response" evidence=ISS

GO:0008285 "negative regulation of cell proliferation" evidence=ISS

GO:0004322 "ferroxidase activity" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0006826 "iron ion transport" evidence=IEA

WB|WBGene00001501 ftn-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 63/111 (56%), Positives = 81/111 (72%)

Query:     3 VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
             +S  RQN+H+E E  +NKQIN+ELYASYVYLSMS +FDRD VALP I+K+FK  SDEE E
Sbjct:     1 MSLARQNYHSEVEAAVNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEERE 60

Query:    63 HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             HA +L++  N RGG + L D++ P   EWGT  +AF  AL LEK  N+ ++
Sbjct:    61 HATELMRVQNLRGGRVVLQDIQKPENDEWGTALKAFEAALALEKFNNESLL 111

GO:0006826 "iron ion transport" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

UNIPROTKB|Q9TYS3 ftn-2 "Ferritin" [Caenorhabditis elegans (taxid:6239)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 63/111 (56%), Positives = 81/111 (72%)

Query:     3 VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
             +S  RQN+H+E E  +NKQIN+ELYASYVYLSMS +FDRD VALP I+K+FK  SDEE E
Sbjct:     1 MSLARQNYHSEVEAAVNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEERE 60

Query:    63 HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             HA +L++  N RGG + L D++ P   EWGT  +AF  AL LEK  N+ ++
Sbjct:    61 HATELMRVQNLRGGRVVLQDIQKPENDEWGTALKAFEAALALEKFNNESLL 111

GO:0042802 "identical protein binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P09528	FRIH_MOUSE	1, ., 1, 6, ., 3, ., 1	0.5909	0.9166	0.6043	yes	N/A
Q95MP7	FRIH_CANFA	1, ., 1, 6, ., 3, ., 1	0.5803	0.9333	0.6120	yes	N/A
Q8MIP0	FRIH_HORSE	1, ., 1, 6, ., 3, ., 1	0.5636	0.9166	0.6043	yes	N/A
P08267	FRIH_CHICK	1, ., 1, 6, ., 3, ., 1	0.5909	0.9166	0.6111	yes	N/A
P19976	FRI1_SOYBN	1, ., 1, 6, ., 3, ., 1	0.5130	0.925	0.444	yes	N/A
P02794	FRIH_HUMAN	1, ., 1, 6, ., 3, ., 1	0.5714	0.9333	0.6120	yes	N/A
P19132	FRIH_RAT	1, ., 1, 6, ., 3, ., 1	0.5909	0.9166	0.6043	yes	N/A
O46414	FRIH_BOVIN	1, ., 1, 6, ., 3, ., 1	0.5727	0.9166	0.6077	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.16.3.1	0.914
3rd Layer	1.16.3	0.921

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	120
cd01056	161	cd01056, Euk_Ferritin, eukaryotic ferritins	3e-49
cd00904	160	cd00904, Ferritin, Ferritin iron storage proteins	1e-33
cd01055	156	cd01055, Nonheme_Ferritin, nonheme-containing ferr	3e-31
pfam00210	142	pfam00210, Ferritin, Ferritin-like domain	1e-24
COG1528	167	COG1528, Ftn, Ferritin-like protein [Inorganic ion	1e-23
PRK10304	165	PRK10304, PRK10304, ferritin; Provisional	7e-07
cd00657	130	cd00657, Ferritin_like, Ferritin-like superfamily	7e-06

>gnl|CDD|153114 cd01056, Euk_Ferritin, eukaryotic ferritins

 Score =  153 bits (390), Expect = 3e-49
 Identities = 65/100 (65%), Positives = 75/100 (75%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
           H E E  +NKQINLEL ASYVYLSM+A+FDRD VALPG +K+F+  SDEE EHA KLIKY
Sbjct: 1   HEECEAALNKQINLELNASYVYLSMAAYFDRDDVALPGFAKFFRKLSDEEREHAEKLIKY 60

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQ 110
            NKRGG + L D+K P + EWG+  EA   AL LEK VNQ
Sbjct: 61  QNKRGGRVVLQDIKKPEKDEWGSGLEALELALDLEKLVNQ 100

Eukaryotic Ferritin (Euk_Ferritin) domain. Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary role, negatively charged residues on the protein shell inner surface of the L subunits promote ferrihydrite nucleation. Most plant ferritins combine both oxidase and nucleation functions in one chain: they have four interior glutamate residues as well as seven ferroxidase center residues. Length = 161

>gnl|CDD|153098 cd00904, Ferritin, Ferritin iron storage proteins

 Score =  114 bits (286), Expect = 1e-33
 Identities = 53/103 (51%), Positives = 72/103 (69%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
             + E  +N+Q+NLELYASY YLSM+ +FDRD VAL G++ +FK  + EE EHA K  KY
Sbjct: 1   SEKVEAAVNRQLNLELYASYTYLSMATYFDRDDVALKGVAHFFKEQAQEEREHAEKFYKY 60

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            N+RGG ++L D++ P   EWG T +A   AL+LEK VNQ ++
Sbjct: 61  QNERGGRVELQDIEKPPSDEWGGTLDAMEAALKLEKFVNQALL 103

Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Bacterial non-heme ferritins are composed only of H chains. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary role, negatively charged residues on the protein shell inner surface of the L subunits promote ferrihydrite nucleation. Most plant ferritins combine both oxidase and nucleation functions in one chain: they have four interior glutamate residues as well as seven ferroxidase center residues. Length = 160

>gnl|CDD|153113 cd01055, Nonheme_Ferritin, nonheme-containing ferritins

 Score =  107 bits (271), Expect = 3e-31
 Identities = 43/100 (43%), Positives = 64/100 (64%), Gaps = 3/100 (3%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
           + E+ +N+QINLELY+SY+YL+M+A FD     L G + +F+  + EE EHA K   YLN
Sbjct: 3   KLEKALNEQINLELYSSYLYLAMAAWFDS--KGLDGFANFFRVQAQEEREHAMKFFDYLN 60

Query: 73  KRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
            RGG ++L  ++AP   E+ +  E F  AL+ E+ V + I
Sbjct: 61  DRGGRVELPAIEAP-PSEFESLLEVFEAALEHEQKVTESI 99

Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite. Length = 156

>gnl|CDD|215791 pfam00210, Ferritin, Ferritin-like domain

 Score = 90.4 bits (225), Expect = 1e-24
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 5/101 (4%)

Query: 15  EEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR 74
            E +N+Q+  EL ASY YL M+ +FD     LPG++++F   ++EE EHA KL + +   
Sbjct: 1   IEALNEQLADELTASYQYLQMAWYFDG--PGLPGLAEFFDEQAEEEREHADKLAERILAL 58

Query: 75  GGTLKLVDVKAP---ARQEWGTTEEAFSHALQLEKDVNQVI 112
           GG   L  V+        E+G+  EA   AL+ EK+V + +
Sbjct: 59  GGKPVLTPVELLEIEPPDEFGSVLEALEAALEHEKEVTESL 99

This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins. Length = 142

>gnl|CDD|224445 COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]

 Score = 88.9 bits (221), Expect = 1e-23
 Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

Query: 16  EKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG 75
           E +N+Q+NLE YAS +YL M+A       +LPG +K+ +  + EE  HA KL  YLN+RG
Sbjct: 8   ELLNEQMNLEFYASNLYLQMAAWCSS--ESLPGFAKFLRAQAQEELTHAMKLFNYLNERG 65

Query: 76  GTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
              +L  ++AP   ++ + +E F   L+ E+ V   I
Sbjct: 66  ARPELKAIEAP-PNKFSSLKELFEKTLEHEQKVTSSI 101

Length = 167

>gnl|CDD|182367 PRK10304, PRK10304, ferritin; Provisional

 Score = 45.0 bits (106), Expect = 7e-07
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 12  AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYL 71
            E  EK+N+Q+NLELY+S +Y  MSA          G + + +  + EE  H  +L  YL
Sbjct: 4   PEMIEKLNEQMNLELYSSLLYQQMSAWCSYH--TFEGAAAFLRRHAQEEMTHMQRLFDYL 61

Query: 72  NKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
              G   ++  V++P   E+ + +E F    + E+ + Q I
Sbjct: 62  TDTGNLPRINTVESPF-AEYSSLDELFQETYKHEQLITQKI 101

Length = 165

>gnl|CDD|153097 cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

 Score = 41.7 bits (98), Expect = 7e-06
 Identities = 23/100 (23%), Positives = 34/100 (34%), Gaps = 9/100 (9%)

Query: 16  EKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG 75
             +N  +  E  A   Y  ++A         P +       +DEE  HA  L + L + G
Sbjct: 1   RLLNDALAGEYAAIIAYGQLAARAPD-----PDLKDELLEIADEERRHADALAERLRELG 55

Query: 76  GTLKLVDVKAPAR----QEWGTTEEAFSHALQLEKDVNQV 111
           GT  L      A     +      EA   AL++E      
Sbjct: 56  GTPPLPPAHLLAAYALPKTSDDPAEALRAALEVEARAIAA 95

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF). Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	120
PRK15022	167	ferritin-like protein; Provisional	100.0
cd00904	160	Ferritin Ferritin iron storage proteins. Ferritins	100.0
PRK10304	165	ferritin; Provisional	100.0
COG1528	167	Ftn Ferritin-like protein [Inorganic ion transport	100.0
cd01056	161	Euk_Ferritin eukaryotic ferritins. Eukaryotic Ferr	100.0
KOG2332|consensus	178		100.0
cd01055	156	Nonheme_Ferritin nonheme-containing ferritins. Non	99.96
PRK10635	158	bacterioferritin; Provisional	99.93
TIGR00754	157	bfr bacterioferritin. Bacterioferritin is a homomu	99.91
cd00907	153	Bacterioferritin Bacterioferritin, ferritin-like d	99.85
cd01041	134	Rubrerythrin Rubrerythrin, ferritin-like diiron-bi	99.84
PF00210	142	Ferritin: Ferritin-like domain; InterPro: IPR00833	99.83
COG2193	157	Bfr Bacterioferritin (cytochrome b1) [Inorganic io	99.81
cd01052	148	DPSL DPS-like protein, ferritin-like diiron-bindin	99.79
cd01046	123	Rubrerythrin_like rubrerythrin-like, diiron-bindin	99.7
PRK13456	186	DNA protection protein DPS; Provisional	99.55
cd07908	154	Mn_catalase_like Manganese catalase-like protein,	99.12
cd00657	130	Ferritin_like Ferritin-like superfamily of diiron-	99.04
cd01043	139	DPS DPS protein, ferritin-like diiron-binding doma	98.99
cd01045	139	Ferritin_like_AB Uncharacterized family of ferriti	98.78
PF02915	137	Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru	98.68
cd01051	156	Mn_catalase Manganese catalase, ferritin-like diir	98.56
COG1633	176	Uncharacterized conserved protein [Function unknow	98.19
PRK09448	162	DNA starvation/stationary phase protection protein	98.1
cd01044	125	Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin	97.93
COG2406	172	Protein distantly related to bacterial ferritins [	97.85
PF09537	111	DUF2383: Domain of unknown function (DUF2383); Int	97.38
PF13668	137	Ferritin_2: Ferritin-like domain	97.31
COG1592	166	Rubrerythrin [Energy production and conversion]	97.18
COG0783	156	Dps DNA-binding ferritin-like protein (oxidative d	97.11
PRK12775	1006	putative trifunctional 2-polyprenylphenol hydroxyl	96.79
TIGR02284	139	conserved hypothetical protein. Members of this pr	96.67
cd01048	135	Ferritin_like_AB2 Uncharacterized family of ferrit	96.47
cd01042	165	DMQH Demethoxyubiquinone hydroxylase, ferritin-lik	95.64
cd07910	180	MiaE MiaE tRNA-modifying nonheme diiron monooxygen	95.15
PF12902	227	Ferritin-like: Ferritin-like; PDB: 3HL1_A.	94.02
cd01041	134	Rubrerythrin Rubrerythrin, ferritin-like diiron-bi	92.09
PF03232	172	COQ7: Ubiquinone biosynthesis protein COQ7; InterP	92.08
cd01046	123	Rubrerythrin_like rubrerythrin-like, diiron-bindin	91.92
PF02915	137	Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru	90.14
cd07908	154	Mn_catalase_like Manganese catalase-like protein,	89.88
cd07648	261	F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Am	89.29
cd07674	261	F-BAR_FCHO1 The F-BAR (FES-CIP4 Homology and Bin/A	88.96
cd01055	156	Nonheme_Ferritin nonheme-containing ferritins. Non	88.41
cd01045	139	Ferritin_like_AB Uncharacterized family of ferriti	87.85
cd07673	269	F-BAR_FCHO2 The F-BAR (FES-CIP4 Homology and Bin/A	86.86
cd07647	239	F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/	86.55
COG1633	176	Uncharacterized conserved protein [Function unknow	85.89
PF14530	131	DUF4439: Domain of unknown function (DUF4439); PDB	84.02
cd07610	191	FCH_F-BAR The Extended FES-CIP4 Homology (FCH) or	83.85
PF04305	253	DUF455: Protein of unknown function (DUF455); Inte	83.81
PF07875	64	Coat_F: Coat F domain; InterPro: IPR012851 The Coa	82.99
cd00657	130	Ferritin_like Ferritin-like superfamily of diiron-	82.98
COG3546	277	Mn-containing catalase [Inorganic ion transport an	81.51
cd07651	236	F-BAR_PombeCdc15_like The F-BAR (FES-CIP4 Homology	81.41
COG2941	204	CAT5 Ubiquinone biosynthesis protein COQ7 [Coenzym	80.85
cd01051	156	Mn_catalase Manganese catalase, ferritin-like diir	80.78

>PRK15022 ferritin-like protein; Provisional

Probab=100.00  E-value=5.8e-38  Score=221.43  Aligned_cols=106  Identities=21%  Similarity=0.375  Sum_probs=102.2

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .+++++++||+|||.|++|||+|++||+||+  +.+|||||+||+.+|.|||+||++|++|+++|||+|.+++|++|. .
T Consensus         2 ~~~~~~~~LN~QIn~E~~aSy~YLsMa~~~~--~~~L~GfA~ff~~qa~EEreHA~k~~~yl~~rGg~v~l~~I~~P~-~   78 (167)
T PRK15022          2 ATAGMLLKLNSQMNLEFYASNLYLHLSEWCS--EQSLNGTATFLRAQAQSNVTQMMRMFNFMKSAGATPIVKAIDVPG-E   78 (167)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHcCCceeeCCCCCCc-c
Confidence            5789999999999999999999999999998  679999999999999999999999999999999999999999995 5


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      +|+|+.++|+.+|++|+.||++|++|++.
T Consensus        79 ~~~s~~e~fe~al~hEk~vt~~I~~L~~~  107 (167)
T PRK15022         79 KLNSLEELFQKTLEEYEQRSSTLAQLADE  107 (167)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999874

>cd00904 Ferritin Ferritin iron storage proteins

Probab=100.00  E-value=1.2e-35  Score=208.65  Aligned_cols=108  Identities=49%  Similarity=0.813  Sum_probs=103.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQE   90 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~   90 (120)
                      +++|+++||+||+.|++||++|++||+||++++++|||||+||+.+|+|||+||++|++||++|||+|++++|++|...+
T Consensus         1 ~~~~~~~Ln~qi~~El~as~~Yl~ma~~~~~~~~~l~g~a~~f~~~s~eE~~HA~~l~~yi~~rgg~~~l~~i~~~~~~~   80 (160)
T cd00904           1 SEKVEAAVNRQLNLELYASYTYLSMATYFDRDDVALKGVAHFFKEQAQEEREHAEKFYKYQNERGGRVELQDIEKPPSDE   80 (160)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCcCCCCcccc
Confidence            57899999999999999999999999999988999999999999999999999999999999999999999999996558


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |+++.++|+.+|++|+.+++.|++|++.
T Consensus        81 ~~~~~e~~e~al~~Ek~v~~~i~~l~~~  108 (160)
T cd00904          81 WGGTLDAMEAALKLEKFVNQALLDLHEL  108 (160)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999874

Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Bacterial non-heme ferritins are composed only of H chains. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary rol

>PRK10304 ferritin; Provisional

Probab=100.00  E-value=2.4e-35  Score=208.18  Aligned_cols=107  Identities=29%  Similarity=0.489  Sum_probs=102.5

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR   88 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~   88 (120)
                      +++++++.+||+||+.||+||++|++||.||+  ++||||||+||+.+|.||++||++|++||++|||.|.+++|++|. 
T Consensus         1 ~~~~~i~~~Ln~qin~El~As~~Yl~ma~~~~--~~gl~g~A~~f~~qs~EE~~HA~kl~~~i~~rgg~~~~~~i~~p~-   77 (165)
T PRK10304          1 MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCS--YHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPF-   77 (165)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCCCCCCc-
Confidence            36899999999999999999999999999999  789999999999999999999999999999999999999999885 


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 ~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .+|+|+.++|+.+|++|+.+|..|+++++.
T Consensus        78 ~~~~s~~e~~~~~l~~E~~vt~~i~~l~~~  107 (165)
T PRK10304         78 AEYSSLDELFQETYKHEQLITQKINELAHA  107 (165)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            499999999999999999999999999864

>COG1528 Ftn Ferritin-like protein [Inorganic ion transport and metabolism]

Probab=100.00  E-value=9.4e-34  Score=198.20  Aligned_cols=106  Identities=35%  Similarity=0.579  Sum_probs=101.9

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .++++.++||+|+|.|++||++|++||+||+  +.+|||+|+||+.+|.||+.||++|++|++.||++|.++.|++|.. 
T Consensus         2 ls~~~~~~LN~Q~N~E~yas~lYl~maa~~~--~~~l~G~A~f~~~qa~EE~~H~~k~~~yl~~~g~~~~l~~I~~P~~-   78 (167)
T COG1528           2 LSEKMIELLNEQMNLEFYASNLYLQMAAWCS--SESLPGFAKFLRAQAQEELTHAMKLFNYLNERGARPELKAIEAPPN-   78 (167)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCChhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCcCCCcc-
Confidence            5789999999999999999999999999999  6799999999999999999999999999999999999999999965 


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      +|+|+.++|+.+|++|+.||+.|++|.+.
T Consensus        79 ~~~s~~e~f~~tlehEq~vt~~I~~L~~~  107 (167)
T COG1528          79 KFSSLKELFEKTLEHEQKVTSSINELAEV  107 (167)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999864

>cd01056 Euk_Ferritin eukaryotic ferritins

Probab=100.00  E-value=2e-33  Score=197.35  Aligned_cols=108  Identities=60%  Similarity=0.894  Sum_probs=102.1

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQE   90 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~   90 (120)
                      +++|+++||+||+.||+||++|++||.||+..++|+|||++||+.+|.|||+||++|++||++|||+|++++|++|....
T Consensus         1 ~~~i~~~Ln~~i~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~a~eE~~HA~~l~~~i~~rgg~~~~~~i~~~~~~~   80 (161)
T cd01056           1 HEECEAALNKQINLELNASYVYLSMAAYFDRDDVALPGFAKFFRKLSDEEREHAEKLIKYQNKRGGRVVLQDIKKPEKDE   80 (161)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCCcc
Confidence            46899999999999999999999999999965559999999999999999999999999999999999999999996358


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |+++.++|+.+|++|+.+++.|+++++.
T Consensus        81 ~~~~~e~l~~al~~E~~vt~~~~~l~~~  108 (161)
T cd01056          81 WGSGLEALELALDLEKLVNQSLLDLHKL  108 (161)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999874

Eukaryotic Ferritin (Euk_Ferritin) domain. Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary role, negatively charged r

>KOG2332|consensus

Probab=100.00  E-value=2.5e-34  Score=203.20  Aligned_cols=115  Identities=56%  Similarity=0.824  Sum_probs=112.9

Q ss_pred             CcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q psy12315          4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDV   83 (120)
Q Consensus         4 s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i   83 (120)
                      +++|++++.++..++|.||+.|+++||.|++||+||++++++++||++||.++|.+||+||++|++|+++|||.|++++|
T Consensus         7 ~~~r~~~~~~~~~~in~~in~el~~sy~Ylsma~yf~rd~v~l~g~~~ff~~~s~eereha~klm~~~n~rgg~i~l~~i   86 (178)
T KOG2332|consen    7 SEARQNYHDEAEAAINSQINLELNASYVYLSMAAYFDRDDVALKGFAKFFLKQSQEEREHAEKLMKTQNMRGGRIELQDI   86 (178)
T ss_pred             HHHhhcchhhccchhhhhccchhccchhhhhhhhccCccccchhhhhhhhhhhhhhhhhhHHHHHHHHHHhCCccccccc
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         84 KAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        84 ~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .+|..++|++.+.+++.||.+|+.|+++|.+||+.
T Consensus        87 ~~P~~~ew~~~l~ale~al~LEk~vn~sLl~Lh~l  121 (178)
T KOG2332|consen   87 KKPELDEWGKGLEALEAALHLEKNVNQSLLELHSL  121 (178)
T ss_pred             cccccchhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99988999999999999999999999999999974

>cd01055 Nonheme_Ferritin nonheme-containing ferritins

Probab=99.96  E-value=8.7e-29  Score=172.20  Aligned_cols=105  Identities=41%  Similarity=0.696  Sum_probs=100.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQE   90 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~   90 (120)
                      +++|+++||++++.|+.|+++|++||.||+  ++++|||++||+..|.+|++||+++++||++|||.|+++++++|.. +
T Consensus         1 ~~~~~~~Ln~~~~~El~A~~~Yl~~a~~~~--~~~~~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~~~~~~~~~~-~   77 (156)
T cd01055           1 SEKLEKALNEQINLELYSSYLYLAMAAWFD--SKGLDGFANFFRVQAQEEREHAMKFFDYLNDRGGRVELPAIEAPPS-E   77 (156)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeeCCCCCCCCc-c
Confidence            578999999999999999999999999999  5699999999999999999999999999999999999999999854 8


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |+++.++|+.+|++|+.++..+.++++.
T Consensus        78 ~~~~~~~l~~al~~E~~~~~~~~~l~~~  105 (156)
T cd01055          78 FESLLEVFEAALEHEQKVTESINNLVDL  105 (156)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999875

Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.

>PRK10635 bacterioferritin; Provisional

Probab=99.93  E-value=5.2e-25  Score=154.54  Aligned_cols=104  Identities=22%  Similarity=0.150  Sum_probs=99.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .++++++.||++++.|+.|+++|+.+|.+|+  +||+++++.+|+.+|.||++||.+|++||+++||.|+++++++|.. 
T Consensus         3 ~~~~vi~~LN~~L~~El~Ai~QY~~ha~~~~--~~G~~~la~~~~~ea~eEm~HA~~l~eRIl~LgG~P~~~~~~~~~~-   79 (158)
T PRK10635          3 GDVKIINYLNKLLGNELVAINQYFLHARMFK--NWGLMRLNDVEYHESIDEMKHADKYIERILFLEGIPNLQDLGKLNI-   79 (158)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCC-
Confidence            3789999999999999999999999999999  9999999999999999999999999999999999999999988854 


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       ..++.++|+.++++|+.++..|+++.+
T Consensus        80 -g~~v~eml~~dl~~E~~ai~~y~e~i~  106 (158)
T PRK10635         80 -GEDVEEMLRSDLRLELEGAKDLREAIA  106 (158)
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             479999999999999999999999875

>TIGR00754 bfr bacterioferritin

Probab=99.91  E-value=4.1e-23  Score=144.26  Aligned_cols=103  Identities=23%  Similarity=0.193  Sum_probs=98.2

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQE   90 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~   90 (120)
                      +++++++||++++.|+.|+++|+.++.||.  +++++|++.||..++.||++||.+|++||+++||.|.+++++.|.. .
T Consensus         4 ~~~~~~~LN~~l~~E~~a~~~Y~~~~~~~~--~~~~~g~a~~~~~~a~EE~~Ha~~laeri~~lGg~p~~~~i~~~~~-~   80 (157)
T TIGR00754         4 DPDVIQHLNKQLTNELTAINQYFLHARMQK--NWGLKELADHEYHESIDEMKHADEIIERILFLEGLPNLQDLGKLRI-G   80 (157)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcCCCCCC-C
Confidence            679999999999999999999999999997  8999999999999999999999999999999999999999998854 3


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       .++.++|+.++++|+.++..++++++
T Consensus        81 -~~~~e~l~~~l~~E~~~~~~~~e~i~  106 (157)
T TIGR00754        81 -ETVREMLEADLALELDVLNRLKEAIA  106 (157)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             78999999999999999999999975

Bacterioferritin is a homomultimer most species. In Neisseria gonorrhoeae, Synechocystis PCC6803, Magnetospirillum magnetotacticum, and Pseudomonas aeruginosa, two types of subunit are found in a heteromultimeric complex, with each species having one member of each type. At present, both types of subunit are including in this single model.

>cd00907 Bacterioferritin Bacterioferritin, ferritin-like diiron-binding domain

Probab=99.85  E-value=2.5e-20  Score=128.87  Aligned_cols=103  Identities=22%  Similarity=0.201  Sum_probs=96.5

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQE   90 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~   90 (120)
                      ++++++.||++++.|+.++++|+.++.+|+  +.+++|+++||+.++.+|++||+.+.+|+..+||.|.+.+++.|..  
T Consensus         3 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~~~~~f~~~a~ee~~Ha~~lae~i~~lGg~p~~~~~~~~~~--   78 (153)
T cd00907           3 DPKVIEALNKALTGELTAINQYFLHARMLE--DWGLEKLAERFRKESIEEMKHADKLIERILFLEGLPNLQRLGKLRI--   78 (153)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCCCCc--
Confidence            678999999999999999999999999998  7899999999999999999999999999999999999988887743  


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      ..++.++++.+++.|+.++..++++++
T Consensus        79 ~~~~~~~l~~~l~~E~~~~~~y~~~~~  105 (153)
T cd00907          79 GEDVPEMLENDLALEYEAIAALNEAIA  105 (153)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            257899999999999999999999875

Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) best

>cd01041 Rubrerythrin Rubrerythrin, ferritin-like diiron-binding domain

Probab=99.84  E-value=4e-20  Score=126.11  Aligned_cols=97  Identities=23%  Similarity=0.236  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCccCC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGT   93 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~~~   93 (120)
                      ..+.||+.+..|+.++++|++||.|++  +.|++|+++||+.+|.+|+.||.++++|++++||.|.     .|.. .|++
T Consensus         2 t~~~L~~a~~~E~~a~~~Y~~~a~~a~--~~g~~~~a~~f~~~a~eE~~HA~~~~~~l~~l~g~~~-----~~~~-~~~~   73 (134)
T cd01041           2 TEKNLLAAFAGESQARNRYTYFAEKAR--KEGYEQIARLFRATAENEKEHAKGHFKLLKGLGGGDT-----GPPI-GIGD   73 (134)
T ss_pred             hHHHHHHHHHhHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----CCCC-Ccch
Confidence            457899999999999999999999999  6799999999999999999999999999999999999     3423 7999


Q ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHh
Q psy12315         94 TEEAFSHALQLEKD-VNQVIIYFFTS  118 (120)
Q Consensus        94 ~~~~l~~aL~~Ek~-v~~~l~~l~~~  118 (120)
                      +.++|+.++++|+. ++..|.++++.
T Consensus        74 ~~~~l~~~~~~E~~e~~~~y~~~~~~   99 (134)
T cd01041          74 TLENLKAAIAGETYEYTEMYPEFAEV   99 (134)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            99999999999995 88999998764

Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.

>PF00210 Ferritin: Ferritin-like domain; InterPro: IPR008331 Ferritin is one of the major non-haem iron storage proteins in animals, plants, and microorganisms []

Probab=99.83  E-value=8.6e-20  Score=123.28  Aligned_cols=100  Identities=34%  Similarity=0.515  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-----cCCCCcC
Q psy12315         15 EEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD-----VKAPARQ   89 (120)
Q Consensus        15 ~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~-----i~~p~~~   89 (120)
                      +++||++++.|+.+++.|+.++.+|+  +.+++|+++||+++++++++|++++++|+..|||.|..+.     ++.|.  
T Consensus         1 i~~Ln~~l~~e~~~~~~y~~~~~~~~--~~~~~~l~~~~~~~a~e~~~h~~~l~e~i~~lgg~p~~~~~~~~~~~~~~--   76 (142)
T PF00210_consen    1 IEALNEQLALELQASQQYLNMHWNFD--GPNFPGLAKFFQDQAEEEREHADELAERILMLGGKPSGSPVEIPEIPKPP--   76 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-SSTSHHHHHHHHSSS--
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCchhhHHHhHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHhhhhhccc--
Confidence            57899999999999999999999999  8899999999999999999999999999999999666544     55563  


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .|+++.++++.+++.|+.++..+.++.+.
T Consensus        77 ~~~~~~~~l~~~l~~e~~~~~~~~~l~~~  105 (142)
T PF00210_consen   77 EWTDPREALEAALEDEKEIIEEYRELIKL  105 (142)
T ss_dssp             SSSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            48899999999999999999999999874

It consists of a mineral core of hydrated ferric oxide, and a multi-subunit protein shell that encloses the former and assures its solubility in an aqueous environment. In animals the protein is mainly cytoplasmic and there are generally two or more genes that encode closely related subunits - in mammals there are two subunits which are known as H(eavy) and L(ight). In plants ferritin is found in the chloroplast []. This entry represents the main structural domain of ferritin. The domain is also found in other ferritin-like proteins such as members of the DNA protection during starvation (DPS) family and bacterioferritins.; GO: 0008199 ferric iron binding, 0006879 cellular iron ion homeostasis; PDB: 1N1Q_C 4DYU_E 2YJJ_D 2YJK_B 2VXX_B 3FVB_A 2WLU_A 2XGW_A 2WLA_A 1Z4A_D ....

>COG2193 Bfr Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]

Probab=99.81  E-value=1.4e-18  Score=119.52  Aligned_cols=103  Identities=23%  Similarity=0.208  Sum_probs=97.2

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQE   90 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~   90 (120)
                      .+++++.||+.+..||.|.++|+.+|..|+  +||+..++++|+++|.+|+.||++++++|++.+|.|+++++++-.  -
T Consensus         4 ~~~Vi~~LN~~L~~EL~ainQYflHsrM~~--~WG~~~L~~~~~~esi~Em~HAd~lieRIlfLeG~Pnlq~~~~l~--i   79 (157)
T COG2193           4 DPKVIRLLNEALGLELAAINQYFLHSRMYK--NWGLTKLAAHEYHESIEEMKHADQLIERILFLEGLPNLQDLGKLR--I   79 (157)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CcChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccc--c
Confidence            478999999999999999999999999999  999999999999999999999999999999999999999999863  4


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      ..++.++++.+|.+|..+...+.+...
T Consensus        80 G~tv~E~L~~DL~~E~~a~~~lk~~i~  106 (157)
T COG2193          80 GETVKEMLEADLALEYEARDALKEAIA  106 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            779999999999999999999887654

>cd01052 DPSL DPS-like protein, ferritin-like diiron-binding domain

Probab=99.79  E-value=4.3e-18  Score=117.08  Aligned_cols=105  Identities=22%  Similarity=0.169  Sum_probs=95.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc-------
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDV-------   83 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i-------   83 (120)
                      .+++++.||++++.|+.++++|+.++.+++  +.++++++++|++++.+|++||+.+.+|++.+||.|..+..       
T Consensus         4 ~~~~~~~Ln~~la~e~~~~~~y~~~~~~~~--g~~f~~l~~~~~~~~~ee~~Had~laEri~~lGg~p~~~~~~~~~~~~   81 (148)
T cd01052           4 VDELIELLNKAFADEWLAYYYYTILAKHVK--GPEGEGIKEELEEAAEEELNHAELLAERIYELGGTPPRDPKDWYEISG   81 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHhc
Confidence            467899999999999999999999999999  88999999999999999999999999999999999997553       


Q ss_pred             ---CCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         84 ---KAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        84 ---~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                         +.| ...+.++.++|+.+++.|+.++..++++.+.
T Consensus        82 ~~~~~~-~~~~~~~~~~l~~~~~~e~~~i~~~~~~~~~  118 (148)
T cd01052          82 CKCGYL-PPDPPDVKGILKVNLKAERCAIKVYKELCDM  118 (148)
T ss_pred             ccccCC-CCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               222 2357789999999999999999999999864

DPSL (DPS-like). DPSL is a phylogenetically distinct class within the ferritin-like superfamily, and similar in many ways to the DPS (DNA Protecting protein under Starved conditions) proteins. Like DPS, these proteins are expressed in response to oxidative stress, form dodecameric cage-like particles, preferentially utilize hydrogen peroxide in the controlled oxidation of iron, and possess a short N-terminal extension implicated in stabilizing cellular DNA. This domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. These proteins are distantly related to bacterial ferritins which assemble 24 monomers, each of which have a four-helix bundle with a fifth shorter helix at the C terminus and a diiron (ferroxidase) center. Ferritins contain a center where oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical

>cd01046 Rubrerythrin_like rubrerythrin-like, diiron-binding domain

Probab=99.70  E-value=3.3e-16  Score=105.67  Aligned_cols=87  Identities=25%  Similarity=0.271  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCccCC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGT   93 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~~~   93 (120)
                      +++.||.+++.|+++++.|++||.|++  ..|++|+++||+.+|.+|+.||.++.+++   |+      |+       +|
T Consensus         2 ~~~~L~~a~~~E~~a~~~Y~~~a~~a~--~eG~~~~A~~f~~~a~eE~~HA~~~~~~l---~~------i~-------~~   63 (123)
T cd01046           2 LEEDLEANFKGETTEVGMYLAMARVAQ--REGYPEVAEELKRIAMEEAEHAARFAELL---GK------VS-------ED   63 (123)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHH---hc------Cc-------cc
Confidence            578999999999999999999999999  67999999999999999999999999966   22      11       68


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         94 TEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        94 ~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      +.++|+.++++|+.++..+.++.+.
T Consensus        64 ~~~~le~a~~~E~~~~~~~~~~~~~   88 (123)
T cd01046          64 TKENLEMMLEGEAGANEGKKDAATE   88 (123)
T ss_pred             HHHHHHHHHHhHHHHHHhHHHHHHH
Confidence            9999999999999999999888753

Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.

>PRK13456 DNA protection protein DPS; Provisional

Probab=99.55  E-value=1.9e-13  Score=97.67  Aligned_cols=105  Identities=18%  Similarity=0.167  Sum_probs=95.2

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC------
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVK------   84 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~------   84 (120)
                      .+++++.||+.+..|+.+.+.|..+++...  ++.-++++.||...+.||+.||+.+.++|.+.||.|.+.+-+      
T Consensus        18 ~~~li~lLn~AlA~E~~a~~~Y~~~a~~~~--G~~~e~V~e~le~a~~EEl~HA~~lAeRI~qLGG~P~~~p~~~~~ls~   95 (186)
T PRK13456         18 VDKLVELLVKNAAAEFTTYYYYTILRAHLI--GLEGEGLKEIAEDARLEDRNHFEALVPRIYELGGKLPRDIREFHDISA   95 (186)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHhhhhc
Confidence            357899999999999999999999999999  888999999999999999999999999999999999987773      


Q ss_pred             -----CCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         85 -----APARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        85 -----~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                           .|  .+++++.++++..|.-|+..+..++++.+-+
T Consensus        96 ~~~~~~p--~d~tdv~~mL~~~L~AEr~AI~~Y~eii~~~  133 (186)
T PRK13456         96 CPDAYLP--ENPTDPKEILKVLLEAERCAIRTYTEICDMT  133 (186)
T ss_pred             CccccCC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 13  2467899999999999999999999998643

>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain

Probab=99.12  E-value=3.6e-09  Score=73.43  Aligned_cols=106  Identities=15%  Similarity=0.068  Sum_probs=88.3

Q ss_pred             cHHHHHHHHHHHH---HHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC-
Q psy12315         11 HAETEEKINKQIN---LELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAP-   86 (120)
Q Consensus        11 ~~~~~~~Ln~qi~---~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p-   86 (120)
                      +++....|++++.   .|+.++.+|+..+....  + +.+.+++.|...|.+|+.|+..+.+.+.++||.|.+...... 
T Consensus        11 ~~~~~~~~~~~~~g~~~E~~ai~~Y~y~~~~~~--~-~~~~~k~~f~~lA~eE~~H~~~l~~~i~~lgg~p~~~~~~~~~   87 (154)
T cd07908          11 NPRYAELLLDDYAGTNSELTAISQYIYQHLISE--E-KYPEIAETFLGIAIVEMHHLEILGQLIVLLGGDPRYRSSSSDK   87 (154)
T ss_pred             ChHHHHHHHHHhCCcchHHHHHHHHHHHHHHcc--C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhcccc
Confidence            4567788888888   99999999999999887  4 679999999999999999999999999999999876433211 


Q ss_pred             ------C-cCccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         87 ------A-RQEWGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        87 ------~-~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                            . .....++.++++.++..|+.....+.++.+.+
T Consensus        88 ~~~~~~~~~~~~~~~~~~L~~~~~~E~~ai~~Y~~~~~~~  127 (154)
T cd07908          88 FTYWTGKYVNYGESIKEMLKLDIASEKAAIAKYKRQAETI  127 (154)
T ss_pred             CCcCCccccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence                  0 11345789999999999999999999887643

This uncharacterized bacterial protein family has a ferritin-like domain similar to that of the manganese catalase protein of Lactobacillus plantarum and the bll3758 protein of Bradyrhizobium japonicum. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio

>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

Probab=99.04  E-value=1.3e-08  Score=65.53  Aligned_cols=96  Identities=24%  Similarity=0.235  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-----cCCCCcCcc
Q psy12315         17 KINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD-----VKAPARQEW   91 (120)
Q Consensus        17 ~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~-----i~~p~~~~~   91 (120)
                      .|+..+..|..++..|..++..+.     .+++..+|...+.+|+.|+..+.+++..+|+.|....     ...+ ....
T Consensus         2 ~L~~~~~~E~~a~~~y~~~~~~~~-----~~~~~~~~~~~a~~E~~H~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~   75 (130)
T cd00657           2 LLNDALAGEYAAIIAYGQLAARAP-----DPDLKDELLEIADEERRHADALAERLRELGGTPPLPPAHLLAAYAL-PKTS   75 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhccc-CCCc
Confidence            689999999999999999999887     5789999999999999999999999999999987654     1222 2356


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         92 GTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        92 ~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .++.+++..+...|......+..+.+.
T Consensus        76 ~~~~~~l~~~~~~E~~~~~~y~~~~~~  102 (130)
T cd00657          76 DDPAEALRAALEVEARAIAAYRELIEQ  102 (130)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            788999999999999998888877654

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyub

>cd01043 DPS DPS protein, ferritin-like diiron-binding domain

Probab=98.99  E-value=1.3e-08  Score=69.31  Aligned_cols=98  Identities=10%  Similarity=0.023  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--------cCCCCc
Q psy12315         17 KINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD--------VKAPAR   88 (120)
Q Consensus        17 ~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~--------i~~p~~   88 (120)
                      .||..+..++..+..|....-+..  +.++..+..+|.+.+.++++|+..++++|...||.|..+.        ++.+..
T Consensus         2 ~Ln~~lA~~~~~~~~~~~~HW~v~--G~~f~~lh~~l~e~~~~~~~~~D~lAERi~~lgg~P~~~~~~~~~~s~l~~~~~   79 (139)
T cd01043           2 ALNQLLADLYVLYLKLKNYHWNVK--GPNFFALHELFEELYDELREAIDEIAERIRALGGKPLGTLKEYAELSTIKEEPA   79 (139)
T ss_pred             HHHHHHHHHHHHHHHHhCCCcCcc--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCC
Confidence            689999999999999999888888  8899999999999999999999999999999999998764        555532


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         89 QEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        89 ~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       .+.++.++++..++.|..+...+++..+
T Consensus        80 -~~~~~~~~l~~~~~~~~~~i~~~~~~i~  107 (139)
T cd01043          80 -GVLSAKEMVAELLEDYETLIEELREAIE  107 (139)
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             4567999999999999999999998765

DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. Members of the DPS family are homopolymers formed by 12 four-helix bundle subunits that assemble with 23 symmetry into a hollow shell. The DPS ferroxidase site is unusual in that it is not located in a four-helix bundle as in ferritin, but is shared by 2-fold symmetry-related subunits providing the iron ligands. Many DPS sequences (e.g., E. coli) disp

>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=98.78  E-value=9.4e-08  Score=63.67  Aligned_cols=99  Identities=24%  Similarity=0.258  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC--CcccccccCCC-------
Q psy12315         16 EKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG--GTLKLVDVKAP-------   86 (120)
Q Consensus        16 ~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rG--g~v~~~~i~~p-------   86 (120)
                      +.||..+..|..+...|..++..++.     ++++.+|+..+.+|+.|+..|.+.+..+|  +.|.+...+..       
T Consensus         1 ~~l~~a~~~E~~~~~~Y~~~a~~~~~-----~~~~~~~~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (139)
T cd01045           1 EILALAIKMEEEAAEFYLELAEKAKD-----PELKKLFEELAEEEKEHAERLEELYEKLFGEELPELEPEDYKEEVEEEP   75 (139)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcccHHHHHHHHhhhh
Confidence            36899999999999999999999883     38999999999999999999999999997  44443221110       


Q ss_pred             ----CcCccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         87 ----ARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        87 ----~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                          ......+..++++.++..|+.....+..+.+.+
T Consensus        76 ~~~~~~~~~~~~~~~l~~a~~~E~~~~~~Y~~~~~~~  112 (139)
T cd01045          76 EFKKALESLMDPLEALRLAIEIEKDAIEFYEELAEKA  112 (139)
T ss_pred             hHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence                011356789999999999999998888876543

Ferritin-like domain found in archaea and bacteria (Ferritin_like_AB). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. This family includes unknown or hypothetical proteins which were sequenced from mostly anaerobic or microaerophilic metal-metabolizing and/or nitrogen-fixing microbes. The family includes sequences from ferric-, sulfate-, and arsenic-reducing bacteria, Geobacter, Magnetospirillum, Desulfovibrio, and Desulfitobacterium. Also included are several nitrogen-fixing endosymbiotic bacteria, Rhizobium, Mesorhizobium, and Bradyrhizobium; also phototrophic purple nonsulfur bacteria, Rhodobacter and Rhodopseudomonas, as well as, obligate thermophiles, Thermotoga, Thermoanaerobacter, and Pyrococcus. The conserved residues of a diiron center are present in this uncharacterized domain.

>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin []

Probab=98.68  E-value=4.8e-07  Score=60.27  Aligned_cols=101  Identities=25%  Similarity=0.279  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc-------
Q psy12315         16 EKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR-------   88 (120)
Q Consensus        16 ~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~-------   88 (120)
                      +.|+..+..|..+...|..+|.-+.  +.+ |.+++.|...|.+|..|+..|.+.+.++++.+..........       
T Consensus         1 e~L~~A~~~E~~~~~~Y~~~a~~~~--~~~-p~~~~~f~~lA~~E~~H~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   77 (137)
T PF02915_consen    1 EILEMAIKMELEAAKFYRELAEKAK--DEG-PELKELFRRLAEEEQEHAKFLEKLLRKLGPGEEPPFLEEKVEYSFFPKL   77 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH--HTT-HHHHHHHHHHHHHHHHHHHHHHHHHCHCSTTHHTHCHCCCCCHCCCCTC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhh--hcc-cHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcchhhhhhhhhhcchh
Confidence            4688999999999999999999999  446 889999999999999999999999999987655431111100       


Q ss_pred             --CccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         89 --QEWGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        89 --~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                        ..-.++..+++.++..|+.....+..+...+
T Consensus        78 ~~~~~~~~~~~l~~a~~~E~~~~~~Y~~~a~~~  110 (137)
T PF02915_consen   78 EEETDENLEEALEMAIKEEKDAYEFYAELARKA  110 (137)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence              0112478999999999999988888876653

The physiological role of Rr has not been identified. The 3-D structure of Desulphovibrio vulgaris rubrerythrin has been solved []. The structure reveals a tetramer of two-domain subunits. In each monomer, the N-terminal 146 residues form a four-alpha-helix bundle containing the diiron-oxo site (centre I), and the C-terminal 45 residues form a rubredoxin-like FeS4 domain.; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1VJX_A 2FZF_A 3SID_B 3QHC_B 3QHB_B 4DI0_A 1J30_B 1YV1_A 1YUZ_B 1YUX_B ....

>cd01051 Mn_catalase Manganese catalase, ferritin-like diiron-binding domain

Probab=98.56  E-value=5.5e-06  Score=58.10  Aligned_cols=105  Identities=16%  Similarity=0.109  Sum_probs=82.8

Q ss_pred             cHHHHHHHHHHHH---HHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCC
Q psy12315         11 HAETEEKINKQIN---LELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPA   87 (120)
Q Consensus        11 ~~~~~~~Ln~qi~---~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~   87 (120)
                      ++.....|.+++.   -|+.++.+|+..++.++    ..+.++..|.+.+.||+.|++.|.+.+.+.||.+.-.+=..+-
T Consensus        18 ~p~~A~~l~~~~gG~~gEl~ai~qYl~q~~~~~----~~~~~~d~l~~ia~eEm~H~e~la~~I~~Lg~~~~g~pw~~~y   93 (156)
T cd01051          18 DPRFAKLLQEQLGGAFGELSAAMQYLFQSFNFR----EDPKYRDLLLDIGTEELSHLEMVATLIAMLLKDSQGVPWTAAY   93 (156)
T ss_pred             CHHHHHHHHHHhCCccHHHHHHHHHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCCCcc
Confidence            3445566666654   69999999999999994    2589999999999999999999999999999854332222221


Q ss_pred             cCccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         88 RQEWGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        88 ~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                      ...-+++.+.+...++.|+.....+.++++.+
T Consensus        94 v~~~~d~~~~L~~ni~aE~~Ai~~Y~~l~~~~  125 (156)
T cd01051          94 IQSSGNLVADLRSNIAAESRARLTYERLYEMT  125 (156)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            22235789999999999999999999988754

Manganese (Mn) catalase is a member of a broad superfamily of ferritin-like diiron enzymes. While many diiron enzymes catalyze dioxygen-dependent reactions, manganese catalase performs peroxide-dependent oxidation-reduction. Catalases are important antioxidant metalloenzymes that catalyze disproportionation of hydrogen peroxide, forming dioxygen and water. Manganese catalase, a nonheme type II catalase, contains a binuclear manganese cluster that catalyzes the redox dismutation of hydrogen peroxide, interconverting between dimanganese(II) [(2,2)] and dimanganese(III) [(3,3)] oxidation states during turnover. Mn catalases are found in a broad range of microorganisms in microaerophilic environments, including the mesophilic lactic acid bacteria (e.g., Lactobacillus plantarum) and bacterial and archaeal thermophiles (e.g., Thermus thermophilus and Pyrobaculum caldifontis). L. plantarum and T. thermophilus holoenz

>COG1633 Uncharacterized conserved protein [Function unknown]

Probab=98.19  E-value=9.4e-05  Score=52.87  Aligned_cols=102  Identities=25%  Similarity=0.237  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc------------
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL------------   80 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~------------   80 (120)
                      .+.++|+..|..|..|...|..+|......     -+.+.|...+.+|++|...|-+.+-++++....            
T Consensus        24 ~~~e~L~~Ai~~E~eA~~fY~~lae~~~~~-----~~rk~~~~la~eE~~H~~~f~~l~~~~~~~~~~~~~~~~~~~~~~   98 (176)
T COG1633          24 SIEELLAIAIRGELEAIKFYEELAERIEDE-----EIRKLFEDLADEEMRHLRKFEKLLEKLTPKEVSSEEEEGEIESEI   98 (176)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-----hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhcchhhhh
Confidence            678999999999999999999999999943     689999999999999999999999999987721            


Q ss_pred             -cccCC-CCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         81 -VDVKA-PARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        81 -~~i~~-p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                       ..+.. +....-.+..+++..+...|+...+.+..+...+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~I~~a~~~E~~t~~~Y~~~~~~~  139 (176)
T COG1633          99 LEYLQPGKEMEKSVSYLEAIEAAMEAEKDTIEFYEELLDEL  139 (176)
T ss_pred             ccccCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence             11111 0011234789999999999999999998887654

>PRK09448 DNA starvation/stationary phase protection protein Dps; Provisional

Probab=98.10  E-value=0.00024  Score=50.00  Aligned_cols=102  Identities=10%  Similarity=0.035  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--------cccc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK--------LVDV   83 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~--------~~~i   83 (120)
                      +++.+.||..+..++.....|..+.-+-.  +.+...+..+|.+++.++++|+..+.+++...||.|.        ...|
T Consensus        21 ~~~~~~Ln~~LA~~~~l~~k~~~~hW~v~--G~~f~~lH~~lee~~~~~~~~~D~iAERi~~lGg~p~~t~~e~~~~s~i   98 (162)
T PRK09448         21 KATIELLNQQLAQFIDLSLITKQAHWNMK--GANFIAVHEMLDGFRTALEDHLDTMAERAVQLGGVALGTTQVVASKTPL   98 (162)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCCCCHHHHHHhCCC
Confidence            45789999999999999999999888887  8899999999999999999999999999999999995        3444


Q ss_pred             CCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         84 KAPARQEWGTTEEAFSHALQLEKDVNQVIIYFF  116 (120)
Q Consensus        84 ~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~  116 (120)
                      +.... .+-+..++++..++.-..+...+++..
T Consensus        99 ~e~~~-~~~~~~~~l~~l~~d~~~~~~~~r~~i  130 (162)
T PRK09448         99 KSYPL-DIHNVQDHLKALADRYAIVANDVRKAI  130 (162)
T ss_pred             CCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44212 333667888888888888877777654

>cd01044 Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin-like diiron-binding domain

Probab=97.93  E-value=6.8e-05  Score=50.33  Aligned_cols=96  Identities=15%  Similarity=0.084  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC---CcCccCC
Q psy12315         17 KINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAP---ARQEWGT   93 (120)
Q Consensus        17 ~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p---~~~~~~~   93 (120)
                      .+|+.+..|..+..+|..+|....  +   |...+.|...|++|++|+..+-+++..+|+.|..+....-   ....+.+
T Consensus         2 ~~~~~~~~E~~~~~~Y~~la~~~~--~---~~~k~~f~~lA~~E~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g   76 (125)
T cd01044           2 RLRKFQKDEITEAAIYRKLAKREK--D---PENREILLKLAEDERRHAEFWKKFLGKRGVPPPRPKLKIFFYKLLARIFG   76 (125)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcC--C---HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHh
Confidence            478899999999999999999887  2   4699999999999999999999999999998751000000   0011334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         94 TEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        94 ~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      +..+++.+...|+.....+.++.+
T Consensus        77 ~~~~l~~~~~~E~~ai~~Y~~~~~  100 (125)
T cd01044          77 PTFVLKLLERGEERAIEKYDRLLE  100 (125)
T ss_pred             HHHHHHHHHHhHHhhHhhHHhhhh
Confidence            567888888899888887776653

Ferritin-like N-terminal domain present in an uncharacterized family of proteins found in bacteria and archaea. These proteins also have a C-terminal CCC1-like transmembrane domain and are thought to be involved in iron and/or manganese transport. This domain has the conserved residues of a diiron center found in other ferritin-like proteins.

>COG2406 Protein distantly related to bacterial ferritins [General function prediction only]

Probab=97.85  E-value=0.0016  Score=45.30  Aligned_cols=104  Identities=15%  Similarity=0.163  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--------ccccc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTL--------KLVDV   83 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v--------~~~~i   83 (120)
                      +++++.|-+....|+.+.|-|+..+.-..  +..=.|...|....-.|-+.|++.+..+|.+.||.+        .++..
T Consensus        16 ~kli~~Llka~AaE~tt~YYYtilr~~l~--Gle~e~~keiae~Ar~E~r~H~e~i~~Ri~elg~~~Prd~~~l~dISgC   93 (172)
T COG2406          16 DKLIELLLKAAAAEWTTYYYYTILRYALK--GLEGEGIKEIAEEAREEDRKHFELIAPRIYELGGDLPRDMKKLHDISGC   93 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHhhcCC
Confidence            47888888999999999999999998877  555566777777777888999999999999999977        23444


Q ss_pred             CCCC-cCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         84 KAPA-RQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        84 ~~p~-~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      +.|. ..+|.++.+.+..+++.|+=....+.++++
T Consensus        94 ~~a~LPedp~D~~~~l~vlv~AE~CAir~ykeic~  128 (172)
T COG2406          94 KPAYLPEDPYDIDEILAVLVKAERCAIRAYKEICN  128 (172)
T ss_pred             CCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3332 357889999999999999999988888875

>PF09537 DUF2383: Domain of unknown function (DUF2383); InterPro: IPR019052 This entry represents a functionally uncharacterised ferritin like domain

Probab=97.38  E-value=0.0011  Score=43.33  Aligned_cols=99  Identities=16%  Similarity=0.155  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCC-cCcc
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPA-RQEW   91 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~-~~~~   91 (120)
                      ++++.||+.+.....+...|-..+.-++  +   |.+..+|.+.+.+...|+..|-.++...||.|.-.+--... ...|
T Consensus         1 ~~i~~Ln~Ll~~~~d~~~~Y~~a~~~~~--~---~~lk~~f~~~~~~~~~~~~~L~~~i~~~Gg~p~~~gs~~g~~~r~~   75 (111)
T PF09537_consen    1 ETIEALNDLLKGLHDGIEGYEKAAEKAE--D---PELKSLFQEFAQERQQHAEELQAEIQELGGEPEESGSFKGALHRAW   75 (111)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH----S---HHHHHHHHHHHHHHHHHHHHHHHHHHHTT--H----HHCHHHH-TT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcccCHHHHHHHHH
Confidence            4678999999999999999999998888  3   78999999999999999999999999999999654322211 1123


Q ss_pred             CCH--------H-HHHHHHHHHHHHHHHHHHHHH
Q psy12315         92 GTT--------E-EAFSHALQLEKDVNQVIIYFF  116 (120)
Q Consensus        92 ~~~--------~-~~l~~aL~~Ek~v~~~l~~l~  116 (120)
                      .++        . .+++.+..-|+.+...+.+..
T Consensus        76 ~~ik~~~~~~d~~aiL~~~~~gE~~~~~~y~~aL  109 (111)
T PF09537_consen   76 MDIKSALGGDDDEAILEECERGEDMALEAYEDAL  109 (111)
T ss_dssp             THHHHS-----H----------------------
T ss_pred             HHHHHHhcCCCccchhhhhhhhhhhhhhhccccc
Confidence            222        2 277888888887777766543

; PDB: 3FSE_B.

>PF13668 Ferritin_2: Ferritin-like domain

Probab=97.31  E-value=0.023  Score=38.32  Aligned_cols=102  Identities=19%  Similarity=0.188  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccc---CcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-ccccCCCCcCc
Q psy12315         15 EEKINKQINLELYASYVYLSMSAHFDRD---VVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK-LVDVKAPARQE   90 (120)
Q Consensus        15 ~~~Ln~qi~~El~as~~Yl~~a~~f~~~---~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~-~~~i~~p~~~~   90 (120)
                      .+.||-.++.|......|..-+.-+...   ...=+....+|+..+..|..|+..|-+-+.  |+.+. -+.+.-| .+.
T Consensus         3 ~~iL~~Al~lE~l~~~fY~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~E~~H~~~l~~~l~--g~~~~~~~~~~~~-~~~   79 (137)
T PF13668_consen    3 LDILNFALNLEYLEADFYQQAAEGFTLQDNKAALDPEVRDLFQEIADQEQGHVDFLQAALE--GGRPVPPPAYDFP-FDP   79 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCccccc-cCC
Confidence            3679999999999999999999855211   112345778999999999999999999988  66663 1222222 236


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                      |++..+.+..++..|......+..+...+
T Consensus        80 ~~~~~~~L~~A~~~E~~~~~~Y~g~~~~~  108 (137)
T PF13668_consen   80 FTDDASFLRLAYTLEDVGVSAYKGAAPQI  108 (137)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            78999999999999999999888776543

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=97.18  E-value=0.004  Score=44.14  Aligned_cols=61  Identities=30%  Similarity=0.414  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG   75 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rG   75 (120)
                      .+.+-|-+...=|=.+...|+.+|...++.  |+|.+++.|+..|.+|..||..+.+-+.+.+
T Consensus         4 ~t~~~L~~aF~GEs~a~~rY~~~A~~A~~e--G~~~va~lfr~iA~~E~~HA~~~~~~l~~~~   64 (166)
T COG1592           4 ETEENLRKAFAGESMAVMRYLIFAKVAEEE--GYPEIARLFRAIAEAEAVHAKNHLKLLGKLL   64 (166)
T ss_pred             hHHHHHHHHhcchHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            345666777777889999999999999955  9999999999999999999999999998755

>COG0783 Dps DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]

Probab=97.11  E-value=0.042  Score=38.57  Aligned_cols=102  Identities=11%  Similarity=0.086  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--------cccc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK--------LVDV   83 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~--------~~~i   83 (120)
                      .++.+.||+++..=..-........  ..-.+..+.-+..+|..+..+-.+|...+.+++...||.|.        ...|
T Consensus        14 ~~~~~~Ln~~lAd~~~Ly~k~~~~H--WnV~G~~F~~lHe~~ee~y~el~~~~DeiAERi~~LGg~p~~t~~~~~~~s~i   91 (156)
T COG0783          14 KKIAEALNQLLADLYVLYLKTHNYH--WNVKGPNFFALHEKLEELYEELAEHVDEIAERIRALGGVPLGTLSEYLKLSSI   91 (156)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcc--cceeCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccHHHHHHhCCC
Confidence            5778888888775444333333322  22236777778999999999999999999999999999986        3455


Q ss_pred             CCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         84 KAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        84 ~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      +.... + .+..++++...+--+.+.+.+++..+
T Consensus        92 ke~~~-~-~~~~~~l~~l~~~~~~l~~~~r~~~~  123 (156)
T COG0783          92 KEEPG-D-YTAREMLKELVEDYEYLIKELRKGIE  123 (156)
T ss_pred             cccCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55433 4 78999999999999999999888765

>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional

Probab=96.79  E-value=0.028  Score=49.75  Aligned_cols=103  Identities=16%  Similarity=0.159  Sum_probs=76.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--cc--cc--ccCC
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGT--LK--LV--DVKA   85 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~--v~--~~--~i~~   85 (120)
                      +...+.|.-.+.+|-..-..|..+|.-..     =+.+.++|...|.+|++|...|.+...+--..  -.  +.  .+..
T Consensus       859 ~~~~eil~~Ai~mE~~g~~FY~~~A~~a~-----~~~~K~lF~~LA~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~  933 (1006)
T PRK12775        859 AAALEAIRTAFEIELGGMAFYARAAKETS-----DPVLKELFLKFAGMEQEHMATLARRYHAAAPSPTEGFKIERAAIMA  933 (1006)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccchhhhhh
Confidence            45678899999999999999999998765     36899999999999999999998886431100  00  00  0001


Q ss_pred             CCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         86 PARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        86 p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                      +....+.++.++++.|+..|++-..-+.++.+..
T Consensus       934 ~~~~~~~~~~~al~lAm~~Ekdai~fY~~la~~~  967 (1006)
T PRK12775        934 GVKGRPDDPGNLFRIAIEFERRAVKFFKERVAET  967 (1006)
T ss_pred             hhccccCCHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            1011345689999999999999999998887653

>TIGR02284 conserved hypothetical protein

Probab=96.67  E-value=0.036  Score=37.97  Aligned_cols=98  Identities=13%  Similarity=0.159  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCC-cCcc--
Q psy12315         15 EEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPA-RQEW--   91 (120)
Q Consensus        15 ~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~-~~~~--   91 (120)
                      ++.||+.|.....+..-|-..+...+     -|.+..+|...+.+...|+..|-..+...||.|.-.+--... ...|  
T Consensus         2 i~~Ln~Lie~~~D~~~gY~~aae~v~-----~~~lk~~f~~~~~~~~~~~~eL~~~v~~lGg~p~~~gs~~g~lhr~w~~   76 (139)
T TIGR02284         2 IHSLNDLIEISIDGKDGFEESAEEVK-----DPELATLFRRIAGEKSAIVSELQQVVASLGGKPEDHGSMVGSLHQFWGK   76 (139)
T ss_pred             hHHHHHHHHHcccHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            57899999999999999999997766     468999999999999999999999999999998742222110 0122  


Q ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         92 -------GTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        92 -------~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                             ++...+++.+..-|..+...+.+..+
T Consensus        77 lks~~~~~~d~aiL~~~e~gEd~~~~~y~~aL~  109 (139)
T TIGR02284        77 IRATLTPNDDYVVLEEAERGEDRAKKAYDETLA  109 (139)
T ss_pred             HHHHHcCCChHHHHHHHHHhHHHHHHHHHHHHh
Confidence                   23455778888888888888777654

Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.

>cd01048 Ferritin_like_AB2 Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=96.47  E-value=0.14  Score=34.76  Aligned_cols=94  Identities=16%  Similarity=0.128  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc-------
Q psy12315         16 EKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR-------   88 (120)
Q Consensus        16 ~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~-------   88 (120)
                      +.|.-.+..|..+-..|..++..+.        ...-|...+..|.+|...+..-+.+.|......+. .+..       
T Consensus         3 ~~L~~Ale~Ek~a~~~Y~~~~~k~~--------~~~~F~~la~~E~~H~~~l~~L~~~~~~~~p~~~~-~~~~f~~~~~~   73 (135)
T cd01048           3 AALLYALEEEKLARDVYLALYEKFG--------GLRPFSNIAESEQRHMDALKTLLERYGLPDPVDPF-SGGVFTNPQYN   73 (135)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--------CcchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcc-ccccccchhHH
Confidence            5678889999999999999997763        35667888999999999888888877754321111 1111       


Q ss_pred             ----CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 ----QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 ----~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                          ..-.|..++++.+...|+.-..-+.++.+.
T Consensus        74 ~l~~~~~~s~~~al~~g~~~E~~~i~~ye~~~~~  107 (135)
T cd01048          74 QLVEQGPKSLQDALEVGVLIEELDIADYDRLLER  107 (135)
T ss_pred             HHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                124479999999999999999988887664

Ferritin-like domain found in archaea and bacteria, subgroup 2 (Ferritin_like_AB2). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. The conserved residues of a diiron center are present within the putative active site.

>cd01042 DMQH Demethoxyubiquinone hydroxylase, ferritin-like diiron-binding domain

Probab=95.64  E-value=0.057  Score=38.26  Aligned_cols=91  Identities=20%  Similarity=0.099  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-cCCCC------cCccCCHHH
Q psy12315         24 LELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD-VKAPA------RQEWGTTEE   96 (120)
Q Consensus        24 ~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~-i~~p~------~~~~~~~~~   96 (120)
                      =|+.|..+|...+..+.  +   |.+..++.+.+.+|.+|-..|-+.+..+|++|++-. +=...      ....-...-
T Consensus        11 GE~gA~~IY~gQ~~~~~--~---~~~~~~l~~~~~~E~~Hl~~f~~~i~~~~~rps~l~PlW~~~gf~lG~~tal~G~~~   85 (165)
T cd01042          11 GEVGAVRIYRGQLAVAR--D---PAVRPLIKEMLDEEKDHLAWFEELLPELGVRPSLLLPLWYVAGFALGALTALLGKKA   85 (165)
T ss_pred             chHHHHHHHHHHHHHhC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHhhChHH
Confidence            48899999999999987  3   899999999999999999999999999999997532 10000      001123455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         97 AFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        97 ~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                      ++...-+.|..|...|++-.+.|
T Consensus        86 a~~~~~avE~~V~~Hy~~ql~~L  108 (165)
T cd01042          86 AMACTAAVETVVEEHYNDQLREL  108 (165)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            77888888888888877665543

Demethoxyubiquinone hydroxylases (DMQH) are members of the ferritin-like, diiron-carboxylate family which are present in eukaryotes (the CLK-1/CAT5 family) and prokaryotes (the Coq7 family). DMQH participates in one of the last steps of ubiquinone biosysnthesis and is responsible for DMQ hydroxylation, resulting in the formation of hydroxyubiquinone, a precursor of ubiquinone. CLK-1 is a mitochondrial inner membrane protein and Coq7 is a proposed interfacial integral membrane protein. Mutations in the Caenorhabditis elegans gene clk-1 affect biological timing and extend longevity. The conserved residues of a diiron center are present in this domain.

>cd07910 MiaE MiaE tRNA-modifying nonheme diiron monooxygenase, ferritin-like diiron-binding domain

Probab=95.15  E-value=0.35  Score=34.71  Aligned_cols=68  Identities=19%  Similarity=0.231  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAP   86 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p   86 (120)
                      .....|-+|.+-|..|+-.=++|=.-|-    ..+++..-+-..+.||+.|-++.++-|.+||.  .++++.++
T Consensus        18 nl~~iL~DHA~CE~KAA~~A~~L~~rY~----~~~~Lv~~m~~LarEEL~HFeqV~~im~~Rgi--~l~~~~~~   85 (180)
T cd07910          18 NLDEILIDHAHCEKKAASSAMSLIFRYP----EKPELVEAMSDLAREELQHFEQVLKIMKKRGI--PLGPDSKD   85 (180)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcC----CcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CCCCCCCC
Confidence            4456788999999999999888866665    35899999999999999999999999999995  45555544

MiaE is a nonheme diiron monooxygenase that catalyzes the posttranscriptional allylic hydroxylation of a modified nucleoside in tRNA called 2-methylthio-N-6-isopentenyl adenosine (ms2i6A). ms2i6A is found at position 37, next to the anticodon at the 3' position in almost all eukaryotic and bacterial tRNA's that read codons beginning with uridine. The miaE gene is absent in Escherichia coli, a finding consistent with the absence of the hydroxylated derivative of ms2i6A in this species.

>PF12902 Ferritin-like: Ferritin-like; PDB: 3HL1_A

Probab=94.02  E-value=0.42  Score=35.46  Aligned_cols=62  Identities=23%  Similarity=0.233  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Q psy12315         18 INKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV   81 (120)
Q Consensus        18 Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~   81 (120)
                      |+..|..|+...-.||..++--+  +-.-.....-.+.-+.|||-|..-..+-++-.||.|.+.
T Consensus         1 Lq~Ai~lE~atip~YL~a~ySi~--~~~~~~~~~~i~~V~~eEMlHl~l~~Nll~alGg~P~l~   62 (227)
T PF12902_consen    1 LQQAIELELATIPPYLTALYSIK--PGTNEEARNLIRSVAIEEMLHLSLAANLLNALGGSPRLT   62 (227)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHBS---TTSH-HHHHHHHHHHHHHHHHHHHHHHHHHTT------
T ss_pred             CcHHHHHHHHHHHHHHHHHcccC--CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccc
Confidence            57789999999999998887774  323333889999999999999999999999999999886

>cd01041 Rubrerythrin Rubrerythrin, ferritin-like diiron-binding domain

Probab=92.09  E-value=1.1  Score=29.97  Aligned_cols=60  Identities=20%  Similarity=0.287  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         12 AETEEKINKQINLELY-ASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~-as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      ..+.+.|...+..|.. +.-.|-.++..+.  ..+-...+.+|.....+|..|+..|=+-+..
T Consensus        72 ~~~~~~l~~~~~~E~~e~~~~y~~~~~~A~--~e~d~~~~~~f~~i~~~E~~H~~~l~~~l~~  132 (134)
T cd01041          72 GDTLENLKAAIAGETYEYTEMYPEFAEVAE--EEGFKEAARSFEAIAEAEKVHAERYKKALEN  132 (134)
T ss_pred             chHHHHHHHHHHhhHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3577889999999996 7799999999999  4589999999999999999999988776544

Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.

>PF03232 COQ7: Ubiquinone biosynthesis protein COQ7; InterPro: IPR011566 Coq7 (also known as Clk-1) is a di-iron carboxylate protein occuring in both prokaryotes and eukaryotes that is essential for ubiquinone biosynthesis [, ]

Probab=92.08  E-value=1.4  Score=31.45  Aligned_cols=100  Identities=16%  Similarity=0.102  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-cCCCCc-----
Q psy12315         15 EEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD-VKAPAR-----   88 (120)
Q Consensus        15 ~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~-i~~p~~-----   88 (120)
                      ...|.--=.-|+.|..+|..-...+..    .|.+..++.+..++|.+|-..|-+.+..+|.+|++-. +=...-     
T Consensus         4 ~r~lRVdHAGE~~A~~iY~gQ~~~~~~----~~~~~~~l~~~~~~E~~Hl~~f~~~l~~~~~RpS~l~Plw~~~g~~LG~   79 (172)
T PF03232_consen    4 ARILRVDHAGEVGAVRIYRGQLAVARR----DPELRPFLKEMAEEEKDHLAWFEQLLPELRVRPSLLNPLWYVAGFALGA   79 (172)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHHHHHHHHhHHcCCCCcHHHHHHHHHHHHHHH
Confidence            344444556799999999999988883    6789999999999999999999999999999886421 100000     


Q ss_pred             -CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 -QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 -~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                       .-.-...-++...-+.|..|.+.+++-.+.
T Consensus        80 ~tal~G~~~~~a~t~avE~~V~~Hy~~Ql~~  110 (172)
T PF03232_consen   80 LTALLGDKAAMACTAAVETVVEEHYNDQLRE  110 (172)
T ss_pred             HHHhhchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             001123446666667777777766655443

It has been implicated in the aging process as mutations in the Caenorhabditis elegans gene lead to increased lifespan []. Coq7 is a membrane-bound protein that functions as a monooxygenase to hydroxylate demethoxyubiquinone (2-methoxy-5-methyl-6-polyprenyl-1,4-benzoquinone) in the penultimate step of ubiquinone biosynthesis []. Biochemical studies indicate that NADH can serve directly as a reductant for catalytic activation of dioxygen and substrate oxidation by the enzyme, with no requirement for an additional reductase protein component []. This direct reaction with NADH is so far unique amongst members of the di-iron carboxylate protein family. This entry is specific for the bacterial Coq7 proteins.; GO: 0006744 ubiquinone biosynthetic process, 0055114 oxidation-reduction process

>cd01046 Rubrerythrin_like rubrerythrin-like, diiron-binding domain

Probab=91.92  E-value=1.2  Score=29.59  Aligned_cols=59  Identities=19%  Similarity=0.228  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN   72 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~   72 (120)
                      ..+.+.|...+..|...+-.|-.++..+.  ..+-...+.||+.....|..|+..+-+-+.
T Consensus        62 ~~~~~~le~a~~~E~~~~~~~~~~~~~A~--~egd~~~~~~~~~~~~~E~~H~~~~~~~l~  120 (123)
T cd01046          62 EDTKENLEMMLEGEAGANEGKKDAATEAK--AEGLDEAHDFFHEAAKDEARHGKMLKGLLE  120 (123)
T ss_pred             ccHHHHHHHHHHhHHHHHHhHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            56778899999999999999999999999  458999999999999999999999877654

Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.

>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin []

Probab=90.14  E-value=2.7  Score=27.25  Aligned_cols=53  Identities=30%  Similarity=0.337  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHH
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIK   69 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~   69 (120)
                      .....++...+..|-.+...|..++..+.     -|...++|...+.+|..|...|-+
T Consensus        83 ~~~~~~l~~a~~~E~~~~~~Y~~~a~~~~-----~~~~~~~~~~l~~~E~~H~~~l~~  135 (137)
T PF02915_consen   83 ENLEEALEMAIKEEKDAYEFYAELARKAP-----DPEIRKLFEELAKEEKEHEDLLEK  135 (137)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHTT-----SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35788999999999999999999998876     467899999999999999998754

The physiological role of Rr has not been identified. The 3-D structure of Desulphovibrio vulgaris rubrerythrin has been solved []. The structure reveals a tetramer of two-domain subunits. In each monomer, the N-terminal 146 residues form a four-alpha-helix bundle containing the diiron-oxo site (centre I), and the C-terminal 45 residues form a rubredoxin-like FeS4 domain.; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1VJX_A 2FZF_A 3SID_B 3QHC_B 3QHB_B 4DI0_A 1J30_B 1YV1_A 1YUZ_B 1YUX_B ....

>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain

Probab=89.88  E-value=2.1  Score=29.25  Aligned_cols=54  Identities=19%  Similarity=0.129  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY   70 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~y   70 (120)
                      ....+.|...+..|-.+...|..++...+  |   +.....|...+.+|..|...|-+.
T Consensus       100 ~~~~~~L~~~~~~E~~ai~~Y~~~~~~~~--d---~~~r~ll~~I~~eE~~H~~~L~~~  153 (154)
T cd07908         100 ESIKEMLKLDIASEKAAIAKYKRQAETIK--D---PYIRALLNRIILDEKLHIKILEEL  153 (154)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHcC--C---HHHHHHHHHHHHHHHHHHHHHHhh
Confidence            35677999999999999999999998655  3   678899999999999999888653

This uncharacterized bacterial protein family has a ferritin-like domain similar to that of the manganese catalase protein of Lactobacillus plantarum and the bll3758 protein of Bradyrhizobium japonicum. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio

>cd07648 F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only proteins

Probab=89.29  E-value=1.7  Score=32.52  Aligned_cols=68  Identities=10%  Similarity=0.148  Sum_probs=42.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         46 LPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        46 l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      +.-++.||++.|.-|.++|..|.+.-.+-.+.+..+...    ..|..+....+..-..-..+...|.++++
T Consensus        21 ~~el~~f~keRa~IEe~Yak~L~kLakk~~~~~~~gt~~----~~w~~i~~~~e~~a~~H~~l~~~L~~~~~   88 (261)
T cd07648          21 VKELADFLRERATIEETYSKALNKLAKQASNSSQLGTFA----PLWLVLRVSTEKLSELHLQLVQKLQELIK   88 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456999999999999999999999888776644322221    23655544444333233344444444443

F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Proteins in this group have been named FCH domain Only (FCHO) proteins. Vertebrates have two members, FCHO1 and FCHO2. These proteins contain an F-BAR domain and a C-terminal domain of unknown function named SAFF which is also present in endophilin interacting protein 1. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules.

>cd07674 F-BAR_FCHO1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 1 protein

Probab=88.96  E-value=1.6  Score=32.78  Aligned_cols=65  Identities=6%  Similarity=0.061  Sum_probs=41.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         47 PGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYF  115 (120)
Q Consensus        47 ~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l  115 (120)
                      .-|+.||+++|.=|.++|..|.+.-..-++.+.++....+    |.......+..-..-..+...|.++
T Consensus        22 kel~~flkeRa~IEe~Yak~L~klak~~~~~~e~Gtl~~~----w~~~~~~~E~~a~~H~~l~~~L~~~   86 (261)
T cd07674          22 KELADFVRERAAIEETYSKSMSKLSKMASNGSPLGTFAPM----WEVFRVSSDKLALCHLELMRKLNDL   86 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3589999999999999999999988665554444433333    5544444444444444444444443

F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. FCH domain Only 1 (FCHO1) may be involved in clathrin-coated vesicle formation. It contains an N-terminal F-BAR domain and a C-terminal domain of unknown function named SAFF which is also present in FCHO2 and endophilin interacting protein 1. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules.

>cd01055 Nonheme_Ferritin nonheme-containing ferritins

Probab=88.41  E-value=4.1  Score=27.67  Aligned_cols=59  Identities=10%  Similarity=-0.030  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      .+.+.|...++.|-.+...|..++..+..  .+-+..+.||.....++.+|...+-+++..
T Consensus        80 ~~~~~l~~al~~E~~~~~~~~~l~~~A~~--~~D~~~~~~l~~~l~~q~e~~~~~~~~l~~  138 (156)
T cd01055          80 SLLEVFEAALEHEQKVTESINNLVDLALE--EKDYATFNFLQWFVKEQVEEEALARDILDK  138 (156)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47789999999999999999999999994  477899999999999999999888888773

Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.

>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=87.85  E-value=5.5  Score=25.70  Aligned_cols=55  Identities=22%  Similarity=0.301  Sum_probs=46.7

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY   70 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~y   70 (120)
                      .....+.|...+..|-.+.-.|..++.-+.  +   +.....|...+.+|+.|...|-+.
T Consensus        84 ~~~~~~~l~~a~~~E~~~~~~Y~~~~~~~~--d---~~~~~~~~~l~~~E~~H~~~l~~~  138 (139)
T cd01045          84 LMDPLEALRLAIEIEKDAIEFYEELAEKAE--D---PEVKKLFEELAEEERGHLRLLEEL  138 (139)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHHcC--C---HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            345678999999999999999999997766  2   368899999999999999988653

Ferritin-like domain found in archaea and bacteria (Ferritin_like_AB). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. This family includes unknown or hypothetical proteins which were sequenced from mostly anaerobic or microaerophilic metal-metabolizing and/or nitrogen-fixing microbes. The family includes sequences from ferric-, sulfate-, and arsenic-reducing bacteria, Geobacter, Magnetospirillum, Desulfovibrio, and Desulfitobacterium. Also included are several nitrogen-fixing endosymbiotic bacteria, Rhizobium, Mesorhizobium, and Bradyrhizobium; also phototrophic purple nonsulfur bacteria, Rhodobacter and Rhodopseudomonas, as well as, obligate thermophiles, Thermotoga, Thermoanaerobacter, and Pyrococcus. The conserved residues of a diiron center are present in this uncharacterized domain.

>cd07673 F-BAR_FCHO2 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 2 protein

Probab=86.86  E-value=2.8  Score=31.79  Aligned_cols=35  Identities=11%  Similarity=0.173  Sum_probs=29.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Q psy12315         47 PGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV   81 (120)
Q Consensus        47 ~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~   81 (120)
                      .-++.||+++|.=|.++|..|.+.-.+-++.+..+
T Consensus        29 kel~~f~keRa~iEe~Yak~L~kLak~~~~~~~~G   63 (269)
T cd07673          29 KELSDFIRERATIEEAYSRSMTKLAKSASNYSQLG   63 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcC
Confidence            45889999999999999999999988776555443

F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. The specific function of FCH domain Only 2 (FCHO2) is still unknown. It contains an N-terminal F-BAR domain and a C-terminal domain of unknown function named SAFF which is also present in FCHO1 and endophilin interacting protein 1. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules.

>cd07647 F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Proteins

Probab=86.55  E-value=2.7  Score=31.10  Aligned_cols=32  Identities=16%  Similarity=0.316  Sum_probs=26.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy12315         46 LPGISKYFKHASDEESEHAHKLIKYLNKRGGT   77 (120)
Q Consensus        46 l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~   77 (120)
                      ...|+.||+..|.=|.++|.+|-+--..-++.
T Consensus        21 ~~el~~f~keRa~iE~eYak~L~kLak~~~~~   52 (239)
T cd07647          21 CKELEDFLKQRAKAEEDYGKALLKLSKSAGPG   52 (239)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            45689999999999999999999987664433

F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Vetebrates contain two Proline-Serine-Threonine Phosphatase-Interacting Proteins (PSTPIPs), PSTPIP1 and PSTPIP2. PSTPIPs are mainly expressed in hematopoietic cells and are involved in the regulation of cell adhesion and motility. Mutations in PSTPIPs have been shown to cause autoinflammatory disorders. PSTPIP1 contains an N-terminal F-BAR domain, PEST motifs, and a C-terminal SH3 domain, while PSTPIP2 contains only the N-terminal F-BAR domain. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules.

>COG1633 Uncharacterized conserved protein [Function unknown]

Probab=85.89  E-value=7.9  Score=27.59  Aligned_cols=59  Identities=22%  Similarity=0.258  Sum_probs=51.3

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR   74 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r   74 (120)
                      +....++|-..+..|-.++.+|.-++..-..     ++..+.|+..+..|+.|+..+-.+++..
T Consensus       111 ~~~~~~~I~~a~~~E~~t~~~Y~~~~~~~~~-----~~~~~~~~~~a~~E~~H~~~l~~~~~~~  169 (176)
T COG1633         111 SVSYLEAIEAAMEAEKDTIEFYEELLDELVN-----EEAKKLFKTIADDEKGHASGLLSLYNRL  169 (176)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHccC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4467889999999999999999999987773     4788999999999999999998887654

>PF14530 DUF4439: Domain of unknown function (DUF4439); PDB: 2IB0_B

Probab=84.02  E-value=11  Score=25.62  Aligned_cols=94  Identities=17%  Similarity=0.079  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCccCCHHH
Q psy12315         17 KINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEE   96 (120)
Q Consensus        17 ~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~~~~~~   96 (120)
                      +|+..+.-|..+.|.|=..+.+..-      ....--.....+.|...+.+...+..+|+.|......=.....-+++..
T Consensus         1 AL~~al~aE~aAvy~ygv~~a~~~~------~~r~~~~~~~~~HR~rRd~l~~~l~~~g~~~p~~~aaY~lP~~v~d~~s   74 (131)
T PF14530_consen    1 ALQAALAAEHAAVYGYGVAAARLDG------DRRAAARAALAAHRARRDALAAALRAAGATPPPPEAAYQLPFPVTDPAS   74 (131)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHS-G------GGHHHHHHHHHHHHHHHHHHHHHHHHTT-------SS---SS---SHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHH
Confidence            4788899999999999999998873      3455566777888899999999999999888543332111124668999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q psy12315         97 AFSHALQLEKDVNQVIIYFF  116 (120)
Q Consensus        97 ~l~~aL~~Ek~v~~~l~~l~  116 (120)
                      +...+..+|..+......+.
T Consensus        75 a~~la~~lE~~~a~aw~~lv   94 (131)
T PF14530_consen   75 AAALAAALEDDCAAAWRALV   94 (131)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999888876

>cd07610 FCH_F-BAR The Extended FES-CIP4 Homology (FCH) or F-BAR (FCH and Bin/Amphiphysin/Rvs) domain, a dimerization module that binds and bends membranes

Probab=83.85  E-value=5.6  Score=27.79  Aligned_cols=35  Identities=23%  Similarity=0.247  Sum_probs=30.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy12315         46 LPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL   80 (120)
Q Consensus        46 l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~   80 (120)
                      +..++.||++.|.=|.++|.+|-+--..-.+.+..
T Consensus        16 ~~e~~~f~keRa~iE~eYak~L~kLak~~~~~~~~   50 (191)
T cd07610          16 LKDLREFLKKRAAIEEEYAKNLQKLAKKFSKKPES   50 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Confidence            55799999999999999999999998877766543

F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. F-BAR domain containing proteins, also known as Pombe Cdc15 homology (PCH) family proteins, include Fes and Fer tyrosine kinases, PACSINs/Syndapins, FCHO, PSTPIP, CIP4-like proteins and srGAPs. Many members also contain an SH3 domain and play roles in endocytosis. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules. These tubules have diameters larger than those observed with N-BARs. The F-BAR domains of some members such as NOSTRIN and Rgd1 are important for the subcellular localization of the protein.

>PF04305 DUF455: Protein of unknown function (DUF455); InterPro: IPR007402 This is a family of uncharacterised proteins

Probab=83.81  E-value=4.9  Score=30.36  Aligned_cols=76  Identities=18%  Similarity=0.208  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCcc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEW   91 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~   91 (120)
                      +.-...|..-.+.|++|....+-...=|.. +... .|-.=|-+.+.+|..|...+.+++...|  ..+++.+... .-|
T Consensus        65 ~~r~~llHaiAhIE~~AIdLa~Da~~RF~~-~lP~-~f~~D~~~va~dEarHf~ll~~rL~~lG--~~yGd~P~h~-gLw  139 (253)
T PF04305_consen   65 EGRAALLHAIAHIELNAIDLALDAIYRFHP-NLPR-EFYDDWLRVADDEARHFRLLRERLEELG--SDYGDLPAHD-GLW  139 (253)
T ss_pred             hhHHHHHHHhcchHHHHHHHHHHHHHHHhc-cCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCCCcchhh-HHH
Confidence            344677888889999999999999999921 3222 3444555789999999999999999999  5778887773 245


Q ss_pred             C
Q psy12315         92 G   92 (120)
Q Consensus        92 ~   92 (120)
                      .
T Consensus       140 ~  140 (253)
T PF04305_consen  140 E  140 (253)
T ss_pred             H
Confidence            4

>PF07875 Coat_F: Coat F domain; InterPro: IPR012851 The Coat F proteins contribute to the Bacillales spore coat

Probab=82.99  E-value=7.2  Score=22.76  Aligned_cols=57  Identities=19%  Similarity=0.261  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy12315         17 KINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTL   78 (120)
Q Consensus        17 ~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v   78 (120)
                      .+++.++.+=.++..|...+.=+.     =|.+-..|.....++.+++..+.+++.++|=-+
T Consensus         5 i~~d~L~~~K~~~~~y~~a~~E~~-----np~lR~~l~~~~~~~~~~~~~l~~~m~~kGwY~   61 (64)
T PF07875_consen    5 IANDLLNSEKAAARNYATAALECA-----NPELRQILQQILNECQQMQYELFNYMNQKGWYQ   61 (64)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcC
Confidence            466777888888888988887777     368899999999999999999999999999543

They occur multiple times in the genomes in which they are found. Bacillus subtilis endospore protein coats protect them and may play a role in their germination []. Spore coat protein F, on the outer surface of the endospore, is one of a suite of proteins that could be used to differentiate between members of the Bacillus genus [].

>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

Probab=82.98  E-value=8.6  Score=23.63  Aligned_cols=53  Identities=19%  Similarity=0.291  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY   70 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~y   70 (120)
                      .....|-..+..|-.+...|..++..+.     -+....+|.....+|..|...+.++
T Consensus        77 ~~~~~l~~~~~~E~~~~~~y~~~~~~~~-----d~~~~~~~~~~~~~E~~H~~~~~~~  129 (130)
T cd00657          77 DPAEALRAALEVEARAIAAYRELIEQAD-----DPELRRLLERILADEQRHAAWFRKL  129 (130)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhcC-----ChHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3456777779999999999999998877     3568999999999999999988765

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyub

>COG3546 Mn-containing catalase [Inorganic ion transport and metabolism]

Probab=81.51  E-value=7.2  Score=29.80  Aligned_cols=65  Identities=15%  Similarity=0.105  Sum_probs=52.6

Q ss_pred             cHHHHHHHHHHH---HHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy12315         11 HAETEEKINKQI---NLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL   80 (120)
Q Consensus        11 ~~~~~~~Ln~qi---~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~   80 (120)
                      ++...++|.+|+   .=||.++.+|+.-+.-|.  +   +++-..+.+-+-||..|.+.+..-++........
T Consensus        18 dp~~A~~lqEqlGG~~GElsaamqYl~Q~fn~r--~---~~~~dll~DI~TEEl~HlEmvat~I~~L~~ga~~   85 (277)
T COG3546          18 NPQLAKLLQEQLGGAFGELSAAMQYLFQGFNVR--D---AKYKDLLMDIGTEELSHLEMVATMINLLNKGATG   85 (277)
T ss_pred             ChHHHHHHHHHhCCcchHHHHHHHHHHhhcccC--c---hHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCC
Confidence            345667777776   469999999999998887  3   6899999999999999999998888776544433

>cd07651 F-BAR_PombeCdc15_like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Schizosaccharomyces pombe Cdc15, and similar proteins

Probab=81.41  E-value=5.6  Score=29.25  Aligned_cols=33  Identities=27%  Similarity=0.336  Sum_probs=28.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy12315         46 LPGISKYFKHASDEESEHAHKLIKYLNKRGGTL   78 (120)
Q Consensus        46 l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v   78 (120)
                      +..+..||++.|.=|.++|.+|-+--.+-++.+
T Consensus        21 ~~el~~f~keRa~iE~eYak~L~kLakk~~~~~   53 (236)
T cd07651          21 LEELRSFYKERASIEEEYAKRLEKLSRKSLGGS   53 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHccccCCC
Confidence            557999999999999999999999887766543

F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. This subfamily is composed of Schizosaccharomyces pombe Cdc15 and Imp2, and similar proteins. These proteins contain an N-terminal F-BAR domain and a C-terminal SH3 domain. S. pombe Cdc15 and Imp2 play both distinct and overlapping roles in the maintenance and strengthening of the contractile ring at the division site, which is required in cell division. Cdc15 is a component of the actomyosin ring and is required in normal cytokinesis. Imp2 colocalizes with the medial ring during septation and is required for normal septation. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation

>COG2941 CAT5 Ubiquinone biosynthesis protein COQ7 [Coenzyme metabolism]

Probab=80.85  E-value=6.3  Score=28.68  Aligned_cols=53  Identities=28%  Similarity=0.224  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy12315         23 NLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL   80 (120)
Q Consensus        23 ~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~   80 (120)
                      .=|+.|-.+|.--+.+....   -+..  -+++.+++|-.|--.+-+++.+||.+|.+
T Consensus        51 aGE~~A~~iY~GQ~~~~r~~---~~R~--~l~em~d~E~~HL~~f~~~l~e~~vRPsl  103 (204)
T COG2941          51 AGELGAQAIYQGQAAVARSP---EPRI--QLKEMADEEIDHLAWFEQRLLELGVRPSL  103 (204)
T ss_pred             hhHHHHHHHHhhHHHHHcCc---chHH--HHHHHHHHHHHHHHHHHHHHHHccCCccH
Confidence            35999999999999998844   3333  89999999999999999999999999975

>cd01051 Mn_catalase Manganese catalase, ferritin-like diiron-binding domain

Probab=80.78  E-value=16  Score=25.38  Aligned_cols=60  Identities=18%  Similarity=0.158  Sum_probs=51.6

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR   74 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r   74 (120)
                      .+..+...|...|..|-.|...|.-+....+  |   |++-.-+.....+|..|...|-+.+...
T Consensus        96 ~~~d~~~~L~~ni~aE~~Ai~~Y~~l~~~~~--D---p~v~~~l~~I~~rE~~H~~~f~~~l~~~  155 (156)
T cd01051          96 SSGNLVADLRSNIAAESRARLTYERLYEMTD--D---PGVKDTLSFLLVREIVHQNAFGKALESL  155 (156)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            5567888999999999999999999999877  4   6677777778999999999999887654

Manganese (Mn) catalase is a member of a broad superfamily of ferritin-like diiron enzymes. While many diiron enzymes catalyze dioxygen-dependent reactions, manganese catalase performs peroxide-dependent oxidation-reduction. Catalases are important antioxidant metalloenzymes that catalyze disproportionation of hydrogen peroxide, forming dioxygen and water. Manganese catalase, a nonheme type II catalase, contains a binuclear manganese cluster that catalyzes the redox dismutation of hydrogen peroxide, interconverting between dimanganese(II) [(2,2)] and dimanganese(III) [(3,3)] oxidation states during turnover. Mn catalases are found in a broad range of microorganisms in microaerophilic environments, including the mesophilic lactic acid bacteria (e.g., Lactobacillus plantarum) and bacterial and archaeal thermophiles (e.g., Thermus thermophilus and Pyrobaculum caldifontis). L. plantarum and T. thermophilus holoenz

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	120
1bg7_A	176	Localized Unfolding At The Junction Of Three Ferrit		4e-33
3sh6_A	176	Frog M-Ferritin, D122r Mutant, With Magnesium Lengt		5e-33
3ka6_A	176	Frog M-Ferritin, Eed Mutant, With Cobalt Length = 1		5e-33
1mfr_A	176	Crystal Structure Of M Ferritin Length = 176		6e-33
3ka8_A	176	Frog M-Ferritin, Eqh Mutant, With Cobalt Length = 1		6e-33
3shx_A	176	Frog M-Ferritin With Magnesium, L134p Mutant Length		6e-33
3ka9_A	176	Frog M-Ferritin, Eeh Mutant, With Cobalt Length = 1		6e-33
3se1_A	176	Frog M-Ferritin With Magnesium, R72d Mutant Length		4e-32
3ajp_A	182	Crystal Structure Of Human H Ferritin E140a Mutant		2e-31
3ajq_A	182	Crystal Structure Of Human H Ferritin E140q Mutant		2e-31
3ajo_A	182	Crystal Structure Of Wild-Type Human Ferritin H Cha		3e-31
3erz_A	183	Directing Noble Metal Ion Chemistry Within A Design		3e-31
2z6m_A	176	Crystal Structure Of Human Ferritin H8 As Biotempla		3e-31
2cei_A	183	Recombinant Human H Ferritin, K86q Mutant, Soaked W		5e-31
3es3_A	183	Directing Noble Metal Ion Chemistry Within A Design		8e-31
1r03_A	182	Crystal Structure Of A Human Mitochondrial Ferritin		1e-30
2chi_A	183	Recombinant Human H Ferritin, K86q And E27d Mutant		1e-30
2clu_A	183	Recombinant Human H Ferritin, K86q And E107d Mutant		1e-30
2cn7_A	183	Recombinant Human H Ferritin, K86q, E27d And E107d		3e-30
1rci_A	173	Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Lengt		5e-29
1rcd_A	173	Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Lengt		3e-28
4dyx_A	172	Crystal Structure Of The Cu-adduct Of Human H-ferri		4e-26
1rcc_A	173	Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Lengt		7e-26
1h96_A	182	Recombinant Mouse L-Chain Ferritin Length = 182		2e-25
2zg8_X	174	Crystal Structure Of Pd(Allyl)APO-H49afr Length = 1		3e-25
2zg9_X	174	Crystal Structure Of Pd(Allyl)APO-H114afr Length =		3e-25
2g4h_A	174	Anomalous Substructure Of Apoferritin Length = 174		4e-25
2za6_A	175	Recombinant Horse L-Chain Apoferritin Length = 175		4e-25
2v2n_A	174	Mutant R59m Recombinant Horse Spleen Apoferritin Co		5e-25
2gyd_A	170	Complex Of Equine Apoferritin With The H-Diaziflura		5e-25
3np2_X	174	Crystal Structure Of Pd(Allyl)APO-E45cC48A-Rhlfr Le		5e-25
3af9_X	174	Crystal Structure Of Pd(Allyl)APO-C48afr Length = 1		6e-25
1ies_A	174	Tetragonal Crystal Structure Of Native Horse Spleen		6e-25
3af8_X	174	Crystal Structure Of Pd(Ally)APO-C126afr Length = 1		7e-25
2zur_X	174	Crystal Structure Of Rh(Nbd)APO-Fr Length = 174		1e-24
3np0_X	174	Crystal Structure Of Pd(Allyl)APO-E45cH49AR52H-Rhlf		1e-24
3hx2_A	192	Crystal Structure Of Human Ferritin Phe167serfsx26		2e-24
3noz_X	174	Crystal Structure Of Pd(Allyl)APO-E45cR52H-Rhlfr Le		2e-24
4dyy_A	172	Crystal Structure Of The Cu-adduct Of Human H-ferri		2e-24
3kxu_A	191	Crystal Structure Of Human Ferritin Ftl498instc Pat		2e-24
2v2l_A	174	Mutant (E53,56,57,60q) Recombinant Horse Spleen Apo		3e-24
2v2p_A	174	Mutant (E53,56,57,60q And R59m) Recombinant Horse S		3e-24
2fg4_A	174	Structure Of Human Ferritin L Chain Length = 174		3e-24
2ffx_J	173	Structure Of Human Ferritin L. Chain Length = 173		3e-24
2za7_A	171	Recombinant Horse L-Chain Apoferritin N-Terminal De		5e-24
4dz0_A	172	Crystal Structure Of The Cu-adduct Of Human H-ferri		1e-23
2za8_A	167	Recombinant Horse L-Chain Apoferritin N-Terminal De		1e-21
3a9q_A	212	Crystal Structure Analysis Of E173a Variant Of The		2e-20
3a68_A	212	Crystal Structure Of Plant Ferritin Reveals A Novel		2e-20
3vnx_A	204	Crystal Structure Of Ferritin From Multicellular Gr		3e-20
1z6o_M	191	Crystal Structure Of Trichoplusia Ni Secreted Ferri		6e-18
3kx9_A	173	Engineering A Closed Form Of The Archaeoglobus Fulg		7e-14
1s3q_A	173	Crystal Structures Of A Novel Open Pore Ferritin Fr		1e-12
1z4a_A	164	Ferritin From T. Maritima Length = 164		2e-12
1vlg_A	176	Crystal Structure Of Ferritin (Tm1128) From Thermot		4e-12
2jd6_0	174	Crystal Structure Of The As Isolated Ferritin From		3e-10
2x17_0	173	The X-Ray Structure Of Ferritin From Pyrococcus Fur		3e-10
1krq_A	167	Crystal Structure Analysis Of Campylobacter Jejuni		1e-08
3e6r_A	168	Crystal Structure Of Apo-Ferritin From Pseudo-Nitzs		1e-08
1eum_A	165	Crystal Structure Of The E.Coli Ferritin Ecftna Len		7e-07
3qz3_A	184	The Crystal Structure Of Ferritin From Vibrio Chole		1e-06
3bve_B	181	Structural Basis For The Iron Uptake Mechanism Of H		1e-06
3egm_A	181	Structural Basis Of Iron Transport Gating In Helico		1e-06
3qd8_A	181	Crystal Structure Of Mycobacterium Tuberculosis Bfr		5e-04
3oj5_A	189	Mycobacterium Tuberculosis Ferritin Homolog, Bfrb L		6e-04

>pdb|1BG7|A Chain A, Localized Unfolding At The Junction Of Three Ferritin Subunits. A Mechanism For Iron Release? Length = 176

Iteration: 1
 Score =  136 bits (342), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 80/110 (72%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH + E  IN+ +N+ELYASY YLSM+ +FDRD +AL  ++K+FK  S EE EH
Sbjct: 3   SQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREH 62
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A KL+K  NKRGG + L DV+ P R EWG T EA   ALQLEK VNQ ++
Sbjct: 63  AEKLMKDQNKRGGRIVLQDVQKPERDEWGNTLEAMQAALQLEKTVNQALL 112

>pdb|3SH6|A Chain A, Frog M-Ferritin, D122r Mutant, With Magnesium Length = 176

Iteration: 1
 Score =  135 bits (340), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
           VSQVRQN+H++ E  +N+ +NLELYASY Y SM A FDRD VAL  ++++FK  S EE E
Sbjct: 2   VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEERE 61
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HA K +KY NKRGG + L D+K P R EWG T EA   ALQLEK VNQ ++
Sbjct: 62  HAEKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALL 112

>pdb|3KA6|A Chain A, Frog M-Ferritin, Eed Mutant, With Cobalt Length = 176

Iteration: 1
 Score =  135 bits (340), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
           VSQVRQN+H++ E  +N+ +NLELYASY Y SM A FDRD VAL  ++++FK  S EE E
Sbjct: 2   VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEERE 61
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HA K +KY NKRGG + L D+K P R EWG T EA   ALQLEK VNQ ++
Sbjct: 62  HAEKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALL 112

>pdb|1MFR|A Chain A, Crystal Structure Of M Ferritin Length = 176

Iteration: 1
 Score =  135 bits (340), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
           VSQVRQN+H++ E  +N+ +NLELYASY Y SM A FDRD VAL  ++++FK  S EE E
Sbjct: 2   VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEERE 61
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HA K +KY NKRGG + L D+K P R EWG T EA   ALQLEK VNQ ++
Sbjct: 62  HAEKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALL 112

>pdb|3KA8|A Chain A, Frog M-Ferritin, Eqh Mutant, With Cobalt Length = 176

Iteration: 1
 Score =  135 bits (340), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
           VSQVRQN+H++ E  +N+ +NLELYASY Y SM A FDRD VAL  ++++FK  S EE E
Sbjct: 2   VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEERE 61
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HA K +KY NKRGG + L D+K P R EWG T EA   ALQLEK VNQ ++
Sbjct: 62  HAEKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALL 112

>pdb|3SHX|A Chain A, Frog M-Ferritin With Magnesium, L134p Mutant Length = 176

Iteration: 1
 Score =  135 bits (340), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
           VSQVRQN+H++ E  +N+ +NLELYASY Y SM A FDRD VAL  ++++FK  S EE E
Sbjct: 2   VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEERE 61
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HA K +KY NKRGG + L D+K P R EWG T EA   ALQLEK VNQ ++
Sbjct: 62  HAEKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALL 112

>pdb|3KA9|A Chain A, Frog M-Ferritin, Eeh Mutant, With Cobalt Length = 176

Iteration: 1
 Score =  135 bits (340), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
           VSQVRQN+H++ E  +N+ +NLELYASY Y SM A FDRD VAL  ++++FK  S EE E
Sbjct: 2   VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEERE 61
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HA K +KY NKRGG + L D+K P R EWG T EA   ALQLEK VNQ ++
Sbjct: 62  HAEKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALL 112

>pdb|3SE1|A Chain A, Frog M-Ferritin With Magnesium, R72d Mutant Length = 176

Iteration: 1
 Score =  132 bits (332), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
           VSQVRQN+H++ E  +N+ +NLELYASY Y SM A FDRD VAL  ++++FK  S EE E
Sbjct: 2   VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEERE 61
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HA K +KY NK GG + L D+K P R EWG T EA   ALQLEK VNQ ++
Sbjct: 62  HAEKFMKYQNKDGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALL 112

>pdb|3AJP|A Chain A, Crystal Structure Of Human H Ferritin E140a Mutant Length = 182

Iteration: 1
 Score =  130 bits (326), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/112 (57%), Positives = 80/112 (71%)
Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 4   STSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 63
Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           EHA KL+K  N+RGG + L D+K P   +W +   A   AL LEK+VNQ ++
Sbjct: 64  EHAEKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLL 115

>pdb|3AJQ|A Chain A, Crystal Structure Of Human H Ferritin E140q Mutant Length = 182

Iteration: 1
 Score =  130 bits (326), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/112 (57%), Positives = 80/112 (71%)
Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 4   STSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 63
Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           EHA KL+K  N+RGG + L D+K P   +W +   A   AL LEK+VNQ ++
Sbjct: 64  EHAEKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLL 115

>pdb|3AJO|A Chain A, Crystal Structure Of Wild-Type Human Ferritin H Chain Length = 182

Iteration: 1
 Score =  130 bits (326), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/112 (57%), Positives = 80/112 (71%)
Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 4   STSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 63
Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           EHA KL+K  N+RGG + L D+K P   +W +   A   AL LEK+VNQ ++
Sbjct: 64  EHAEKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLL 115

>pdb|3ERZ|A Chain A, Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. Mercury Ions On The Three-Fold Channel Length = 183

Iteration: 1
 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/112 (57%), Positives = 80/112 (71%)
Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+  ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 5   STSQVRQNYDQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 64
Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            HA KL+K  N+RGG + L D+K P R +W +   A   ALQLEK+VNQ ++
Sbjct: 65  CHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMEAALQLEKNVNQSLL 116

>pdb|2Z6M|A Chain A, Crystal Structure Of Human Ferritin H8 As Biotemplate For Noble Metal Nanoparticle Synthesis Length = 176

Iteration: 1
 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/112 (57%), Positives = 80/112 (71%)
Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+  ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 4   STSQVRQNYDQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 63
Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            HA KL+K  N+RGG + L D+K P R +W +   A   ALQLEK+VNQ ++
Sbjct: 64  CHAEKLMKLQNQRGGRIFLQDIKKPDRDDWESGLNAMEAALQLEKNVNQSLL 115

>pdb|2CEI|A Chain A, Recombinant Human H Ferritin, K86q Mutant, Soaked With Zn Length = 183

Iteration: 1
 Score =  129 bits (323), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 63/112 (56%), Positives = 80/112 (71%)
Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 5   STSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 64
Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           EHA KL+K  N+RGG + L D++ P   +W +   A   AL LEK+VNQ ++
Sbjct: 65  EHAEKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLEKNVNQSLL 116

>pdb|3ES3|A Chain A, Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. The Complex With Gold Ions. Ferritin H8-H9x Mutant Length = 183

Iteration: 1
 Score =  128 bits (321), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 63/112 (56%), Positives = 80/112 (71%)
Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+  ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 5   STSQVRQNYDQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 64
Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            HA KL+K  N+RGG + L D++ P R +W +   A   ALQLEK+VNQ ++
Sbjct: 65  CHAEKLMKLQNQRGGRIFLQDIQKPDRDDWESGLNAMEAALQLEKNVNQSLL 116

>pdb|1R03|A Chain A, Crystal Structure Of A Human Mitochondrial Ferritin Length = 182

Iteration: 1
 Score =  127 bits (320), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/110 (55%), Positives = 81/110 (73%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           S+VRQNFH ++E  IN+QINLELYASYVYLSM+ +F RD VAL   S+YF H S EE+EH
Sbjct: 6   SRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEH 65
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A KL++  N+RGG ++L D+K P + +W +   A   AL LEK+VNQ ++
Sbjct: 66  AEKLMRLQNQRGGRIRLQDIKKPEQDDWESGLHAMECALLLEKNVNQSLL 115

>pdb|2CHI|A Chain A, Recombinant Human H Ferritin, K86q And E27d Mutant Length = 183

Iteration: 1
 Score =  127 bits (320), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 80/112 (71%)
Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+H ++E  IN+QINL+LYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 5   STSQVRQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 64
Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           EHA KL+K  N+RGG + L D++ P   +W +   A   AL LEK+VNQ ++
Sbjct: 65  EHAEKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLEKNVNQSLL 116

>pdb|2CLU|A Chain A, Recombinant Human H Ferritin, K86q And E107d Mutant Length = 183

Iteration: 1
 Score =  127 bits (320), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 80/112 (71%)
Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 5   STSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 64
Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           EHA KL+K  N+RGG + L D++ P   +W +   A   AL L+K+VNQ ++
Sbjct: 65  EHAEKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLDKNVNQSLL 116

>pdb|2CN7|A Chain A, Recombinant Human H Ferritin, K86q, E27d And E107d Mutant Length = 183

Iteration: 1
 Score =  126 bits (317), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 80/112 (71%)
Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+H ++E  IN+QINL+LYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 5   STSQVRQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 64
Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           EHA KL+K  N+RGG + L D++ P   +W +   A   AL L+K+VNQ ++
Sbjct: 65  EHAEKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLDKNVNQSLL 116

>pdb|1RCI|A Chain A, Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Length = 173

Iteration: 1
 Score =  122 bits (306), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 79/110 (71%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH + E  +N+ +NL+ Y+SYVYLSM+++F+RD VAL   +K+F+  S+EE EH
Sbjct: 3   SQVRQNFHQDCEAGLNRTVNLKFYSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEH 62
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A KLI+Y N+RGG + L  V+ P R +W    EA   AL+L+K VNQ ++
Sbjct: 63  AEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALL 112

>pdb|1RCD|A Chain A, Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Length = 173

Iteration: 1
 Score =  120 bits (300), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 79/110 (71%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH + E  +N+ +NL+ ++SYVYLSM+++F+RD VAL   +K+F+  S+EE EH
Sbjct: 3   SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEH 62
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A KLI+Y N+RGG + L  V+ P R +W    EA   AL+L+K VNQ ++
Sbjct: 63  AEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALL 112

>pdb|4DYX|A Chain A, Crystal Structure Of The Cu-adduct Of Human H-ferritin Variant 4his- Delta C-star Length = 172

Iteration: 1
 Score =  112 bits (281), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
            SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE E
Sbjct: 1   TSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFHHQSHEEHE 60
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HAHKL+K  N+RGG + L D++ P   +W +   A   AL LEK+VNQ ++
Sbjct: 61  HAHKLMKLQNQRGGRIFLQDIQKPDEDDWESGLNAMEAALHLEKNVNQSLL 111

>pdb|1RCC|A Chain A, Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Length = 173

Iteration: 1
 Score =  112 bits (279), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 75/110 (68%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH + E  +N+ +NL+ ++SYVYLSM+++F+RD VAL   +K+F+  S     H
Sbjct: 3   SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSAAAKAH 62
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A KLI+Y N+RGG + L  V+ P R +W    EA   AL+L+K VNQ ++
Sbjct: 63  AEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALL 112

>pdb|1H96|A Chain A, Recombinant Mouse L-Chain Ferritin Length = 182

Iteration: 1
 Score =  110 bits (276), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 49/111 (44%), Positives = 74/111 (66%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
            SQ+RQN+  E E  +N+ +NL L ASY YLS+   FDRD VAL G+  +F+  ++E+ E
Sbjct: 1   TSQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKRE 60
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
            A +L+++ N RGG     DV+ P++ EWG T+EA   AL +EK++NQ ++
Sbjct: 61  GAERLLEFQNDRGGRALFQDVQKPSQDEWGKTQEAMEAALAMEKNLNQALL 111

>pdb|2ZG8|X Chain X, Crystal Structure Of Pd(Allyl)APO-H49afr Length = 174

Iteration: 1
 Score =  110 bits (274), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 74/110 (67%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCAFFRELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALL 111

>pdb|2ZG9|X Chain X, Crystal Structure Of Pd(Allyl)APO-H114afr Length = 174

Iteration: 1
 Score =  109 bits (273), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 74/110 (67%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALL 111

>pdb|2G4H|A Chain A, Anomalous Substructure Of Apoferritin Length = 174

Iteration: 1
 Score =  109 bits (272), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 74/110 (67%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALL 111

>pdb|2ZA6|A Chain A, Recombinant Horse L-Chain Apoferritin Length = 175

Iteration: 1
 Score =  109 bits (272), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 74/110 (67%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E 
Sbjct: 3   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREG 62
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 63  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALL 112

>pdb|2V2N|A Chain A, Mutant R59m Recombinant Horse Spleen Apoferritin Cocrystallized With Haemin In Acidic Conditions Length = 174

Iteration: 1
 Score =  109 bits (272), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 74/110 (67%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKMEG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALL 111

>pdb|2GYD|A Chain A, Complex Of Equine Apoferritin With The H-Diaziflurane Photolabeling Reagent Length = 170

Iteration: 1
 Score =  109 bits (272), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 74/110 (67%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E 
Sbjct: 1   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREG 60
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 61  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALL 110

>pdb|3NP2|X Chain X, Crystal Structure Of Pd(Allyl)APO-E45cC48A-Rhlfr Length = 174

Iteration: 1
 Score =  108 bits (271), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 75/110 (68%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G++ +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALCGVAHFFRELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALL 111

>pdb|3AF9|X Chain X, Crystal Structure Of Pd(Allyl)APO-C48afr Length = 174

Iteration: 1
 Score =  108 bits (271), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 75/110 (68%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G++ +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVAHFFRELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALL 111

>pdb|1IES|A Chain A, Tetragonal Crystal Structure Of Native Horse Spleen Ferritin Length = 174

Iteration: 1
 Score =  108 bits (271), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 74/110 (67%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALL 111

>pdb|3AF8|X Chain X, Crystal Structure Of Pd(Ally)APO-C126afr Length = 174

Iteration: 1
 Score =  108 bits (270), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 74/110 (67%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALL 111

>pdb|2ZUR|X Chain X, Crystal Structure Of Rh(Nbd)APO-Fr Length = 174

Iteration: 1
 Score =  108 bits (269), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 74/110 (67%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVXHFFRELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALL 111

>pdb|3NP0|X Chain X, Crystal Structure Of Pd(Allyl)APO-E45cH49AR52H-Rhlfr Length = 174

Iteration: 1
 Score =  107 bits (268), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 73/110 (66%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F   ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALCGVCAFFHELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALL 111

>pdb|3HX2|A Chain A, Crystal Structure Of Human Ferritin Phe167serfsx26 Mutant. This File Is A Part 13 OF THE SPLIT ENTRY AND CONTAINS THE Copies 1 And 2 Of The Total Six Copies Of The Biological Unit That Are Present In The Crystallographic Asymmetric Unit. The Entire Structure Contains Six Copies Of The Biological Unit In The Crystallographic Asymmetric Unit And Is Described In Remark 400 Length = 192

Iteration: 1
 Score =  107 bits (266), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 71/110 (64%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  + E  +N  +NL L ASY YLS+  +FDRD VAL G+S +F+  ++E+ E 
Sbjct: 4   SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREG 63
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             +L+K  N+RGG     D+K PA  EWG T +A   A+ LEK +NQ ++
Sbjct: 64  YERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALL 113

>pdb|3NOZ|X Chain X, Crystal Structure Of Pd(Allyl)APO-E45cR52H-Rhlfr Length = 174

Iteration: 1
 Score =  107 bits (266), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 73/110 (66%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F   ++E+ E 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALCGVCHFFHELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALL 111

>pdb|4DYY|A Chain A, Crystal Structure Of The Cu-adduct Of Human H-ferritin Variant Mic1 Length = 172

Iteration: 1
 Score =  107 bits (266), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
            SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   +KYF H S EE E
Sbjct: 1   TSQVRQNYHQDSEAAINRQINLELYASYVYLSMSEYFDRDDVALKNFAKYFHHQSHEEHE 60
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HAHKL+K   +RGG + L D++     +W +   A   AL LEK+VNQ ++
Sbjct: 61  HAHKLMKLQEQRGGRIFLQDIQKADEDDWESGLNAMEAALHLEKNVNQSLL 111

>pdb|3KXU|A Chain A, Crystal Structure Of Human Ferritin Ftl498instc Pathogenic M Length = 191

Iteration: 1
 Score =  107 bits (266), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 71/110 (64%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  + E  +N  +NL L ASY YLS+  +FDRD VAL G+S +F+  ++E+ E 
Sbjct: 3   SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREG 62
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             +L+K  N+RGG     D+K PA  EWG T +A   A+ LEK +NQ ++
Sbjct: 63  YERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALL 112

>pdb|2V2L|A Chain A, Mutant (E53,56,57,60q) Recombinant Horse Spleen Apoferritin Cocrystallized With Haemin In Acidic Conditions Length = 174

Iteration: 1
 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 73/110 (66%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  + ++ + 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKRQG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALL 111

>pdb|2V2P|A Chain A, Mutant (E53,56,57,60q And R59m) Recombinant Horse Spleen Apoferritin Cocrystallized With Haemin In Acidic Conditions Length = 174

Iteration: 1
 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 73/110 (66%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  + ++ + 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALL 111

>pdb|2FG4|A Chain A, Structure Of Human Ferritin L Chain Length = 174

Iteration: 1
 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 71/110 (64%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  + E  +N  +NL L ASY YLS+  +FDRD VAL G+S +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             +L+K  N+RGG     D+K PA  EWG T +A   A+ LEK +NQ ++
Sbjct: 62  YERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALL 111

>pdb|2FFX|J Chain J, Structure Of Human Ferritin L. Chain Length = 173

Iteration: 1
 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 71/110 (64%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  + E  +N  +NL L ASY YLS+  +FDRD VAL G+S +F+  ++E+ E 
Sbjct: 2   SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREG 61
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             +L+K  N+RGG     D+K PA  EWG T +A   A+ LEK +NQ ++
Sbjct: 62  YERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALL 111

>pdb|2ZA7|A Chain A, Recombinant Horse L-Chain Apoferritin N-Terminal Deletion Mutant (Residues 1-4) Length = 171

Iteration: 1
 Score =  105 bits (263), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 72/108 (66%)
Query: 6   VRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAH 65
           +RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E A 
Sbjct: 1   IRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAE 60
Query: 66  KLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 61  RLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALL 108

>pdb|4DZ0|A Chain A, Crystal Structure Of The Cu-adduct Of Human H-ferritin Variant Mic1 Labeled With A Dansyl Fluorophore Length = 172

Iteration: 1
 Score =  104 bits (260), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 77/111 (69%)
Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
            SQVRQN+H ++E  IN+QINLELYASYVYLSMS +FDRD VAL   + YF H S EE E
Sbjct: 1   TSQVRQNYHQDSEAAINRQINLELYASYVYLSMSEYFDRDDVALKNFACYFHHQSHEEHE 60
Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
           HAHKL+K   +RGG + L D++     +W +   A   AL LEK+VNQ ++
Sbjct: 61  HAHKLMKLQEQRGGRIFLQDIQKADEDDWESGLNAMEAALHLEKNVNQSLL 111

>pdb|2ZA8|A Chain A, Recombinant Horse L-Chain Apoferritin N-Terminal Deletion Mutant (Residues 1-8) Length = 167

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 68/104 (65%)
Query: 10  FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIK 69
           +  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  ++E+ E A +L+K
Sbjct: 1   YSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLK 60
Query: 70  YLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVII 113
             N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ ++
Sbjct: 61  MQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALL 104

>pdb|3A9Q|A Chain A, Crystal Structure Analysis Of E173a Variant Of The Soybean Ferritin Sfer4 Length = 212

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           S  RQ +  E+E  +N+QIN+E   SYVY +M A+FDRD VAL G++K+FK +S+EE EH
Sbjct: 35  SLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREH 94
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQ----EWGTTEEAFSHALQLEKDVNQVII 113
           A KL++Y NKRGG +KL  +  P       + G    A   AL LEK  N+ ++
Sbjct: 95  AEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLL 148

>pdb|3A68|A Chain A, Crystal Structure Of Plant Ferritin Reveals A Novel Metal Binding Site That Functions As A Transit Site For Metal Transfer In Ferritin Length = 212

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           S  RQ +  E+E  +N+QIN+E   SYVY +M A+FDRD VAL G++K+FK +S+EE EH
Sbjct: 35  SLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREH 94
Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQ----EWGTTEEAFSHALQLEKDVNQVII 113
           A KL++Y NKRGG +KL  +  P       + G    A   AL LEK  N+ ++
Sbjct: 95  AEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLL 148

>pdb|3VNX|A Chain A, Crystal Structure Of Ferritin From Multicellular Green Algae, Ulva Pertusa Length = 204

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           S  R  +H E E  IN+QIN+E   SYVY ++ ++F RD V LPG +K+FK ASDEE EH
Sbjct: 30  SYARVEYHIECEAAINEQINIEYTISYVYHALHSYFARDNVGLPGFAKFFKEASDEEREH 89
Query: 64  AHKLIKYLNKRGGTLKLVDVKAP----ARQEWGTTEEAFSHALQLEK 106
           AH L+ Y  KRGG ++L  + AP    A  + G    A   AL LEK
Sbjct: 90  AHMLMDYQTKRGGRVELKPLAAPEMEFANDDKGEALYAMELALSLEK 136

>pdb|1Z6O|M Chain M, Crystal Structure Of Trichoplusia Ni Secreted Ferritin Length = 191

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 10  FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIK 69
            H      + +QI +E+ AS  YL+M AHF +DVV  PG ++ F  A+ EE EHA KLI+
Sbjct: 17  MHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIE 76
Query: 70  YLNKRG----GTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           YL  RG        L+ V+ P R  W    EA  HAL +E DV + I
Sbjct: 77  YLLMRGELTNDVSSLLQVRPPTRSSWKGGVEALEHALSMESDVTKSI 123

>pdb|3KX9|A Chain A, Engineering A Closed Form Of The Archaeoglobus Fulgidus Ferritin By Site Directed Mutagenesis Length = 173

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 16  EKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG 75
           E +N+QIN E+Y++Y+YLSM+++FD   + L G S + +    EE  HA K+  ++++RG
Sbjct: 10  EALNRQINAEIYSAYLYLSMASYFDS--IGLKGFSNWMRVQWQEELMHAMKMFDFVSERG 67
Query: 76  GTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           G +KL  V+ P   EW +   AF H  + E +V + I
Sbjct: 68  GRVKLYAVEEPP-SEWDSPLAAFEHVYEHEVNVTKRI 103

>pdb|1S3Q|A Chain A, Crystal Structures Of A Novel Open Pore Ferritin From The Hyperthermophilic Archaeon Archaeoglobus Fulgidus Length = 173

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 16  EKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG 75
           E +N+QIN E+Y++Y+YLS +++FD   + L G S + +    EE  HA K   ++++RG
Sbjct: 10  EALNRQINAEIYSAYLYLSXASYFDS--IGLKGFSNWXRVQWQEELXHAXKXFDFVSERG 67
Query: 76  GTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           G +KL  V+ P   EW +   AF H  + E +V + I
Sbjct: 68  GRVKLYAVEEPP-SEWDSPLAAFEHVYEHEVNVTKRI 103

>pdb|1Z4A|A Chain A, Ferritin From T. Maritima Length = 164

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 18  INKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGT 77
           +N+Q+N E+Y+SY+YLSM+ +FD +     G + + K  + EE  HA K  +Y+ +RGG 
Sbjct: 12  LNEQLNREIYSSYLYLSMATYFDAE--GFKGFAHWMKKQAQEELTHAMKFYEYIYERGGR 69
Query: 78  LKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           ++L  ++ P    W   ++AF  AL+ E+ V Q I
Sbjct: 70  VELEAIEKPPSN-WNGIKDAFEAALKHEEFVTQSI 103

>pdb|1VLG|A Chain A, Crystal Structure Of Ferritin (Tm1128) From Thermotoga Maritima At 2.00 A Resolution Length = 176

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 18  INKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGT 77
           +N Q+N E+Y+SY+YLSM+ +FD +     G + + K  + EE  HA K  +Y+ +RGG 
Sbjct: 24  LNDQLNREIYSSYLYLSMATYFDAE--GFKGFAHWMKKQAQEELTHAMKFYEYIYERGGR 81
Query: 78  LKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           ++L  ++ P    W   ++AF  AL+ E+ V Q I
Sbjct: 82  VELEAIEKPPSN-WNGIKDAFEAALKHEEFVTQSI 115

>pdb|2JD6|0 Chain 0, Crystal Structure Of The As Isolated Ferritin From The Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus Length = 174

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 18  INKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGT 77
           +N Q+N ELY++Y+Y +M+A+F+   + L G + + K  ++EE  HA +   Y+  R G 
Sbjct: 10  LNDQLNRELYSAYLYFAMAAYFED--LGLEGFANWMKAQAEEEIGHALRFYNYIYDRNGR 67
Query: 78  LKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSLA 120
           ++L ++  P + EW +  +AF  A + EK +++  IY   +LA
Sbjct: 68  VELDEIPKPPK-EWESPLKAFEAAYEHEKFISKS-IYELAALA 108

>pdb|2X17|0 Chain 0, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus Loaded With Ag(I) Length = 173

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 18  INKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGT 77
           +N Q+N ELY++Y+Y +M+A+F+   + L G + + K  ++EE  HA +   Y+  R G 
Sbjct: 10  LNDQLNRELYSAYLYFAMAAYFED--LGLEGFANWMKAQAEEEIGHALRFYNYIYDRNGR 67
Query: 78  LKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSLA 120
           ++L ++  P + EW +  +AF  A + EK +++  IY   +LA
Sbjct: 68  VELDEIPKPPK-EWESPLKAFEAAYEHEKFISKS-IYELAALA 108

>pdb|1KRQ|A Chain A, Crystal Structure Analysis Of Campylobacter Jejuni Ferritin Length = 167

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
Query: 18  INKQINLELYASYVYLSMSAHFDRDVVALPGISKY-FKHASDEESEHAHKLIKYLNKRGG 76
           +N+QIN E+YA+ +YLSMS+    +  +L G   + F HAS EES+HA KLI YLN+   
Sbjct: 10  LNEQINKEMYAANLYLSMSSWCYEN--SLDGAGAFLFAHAS-EESDHAKKLITYLNETDS 66
Query: 77  TLKLVDVKAPA---RQEWGTTEEAFSHALQLEKDVNQVIIYFFT 117
            ++L +VK P    +      E+ + H   + K +N ++ +  T
Sbjct: 67  HVELQEVKQPEQNFKSLLDVFEKTYEHEQFITKSINTLVEHMLT 110

>pdb|3E6R|A Chain A, Crystal Structure Of Apo-Ferritin From Pseudo-Nitzschia Multiseries Length = 168

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 19  NKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTL 78
           N+Q+  E  AS VYLS S  FD++     G++ Y    S EE EH    + + NKR   +
Sbjct: 10  NRQVTQEFTASQVYLSASIWFDQN--DWEGMAAYMLAESAEEREHGLGFVDFANKRNIPI 67
Query: 79  KLVDVKAP-ARQEWGTTEEAFSHALQLEK 106
           +L  V AP +  EW + E+ +   L+LE+
Sbjct: 68  ELQAVPAPVSCAEWSSPEDVWQSILELEQ 96

>pdb|1EUM|A Chain A, Crystal Structure Of The E.Coli Ferritin Ecftna Length = 165

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 16  EKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG 75
           EK+N+Q+NLELY+S +Y  MSA          G + + +  + EE  H  +L  YL   G
Sbjct: 8   EKLNEQMNLELYSSLLYQQMSAWCSYHT--FEGAAAFLRRHAQEEMTHMQRLFDYLTDTG 65
Query: 76  GTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
              ++  V++P   E+ + +E F    + E+ + Q I
Sbjct: 66  NLPRINTVESPFA-EYSSLDELFQETYKHEQLITQKI 101

>pdb|3QZ3|A Chain A, The Crystal Structure Of Ferritin From Vibrio Cholerae O1 Biovar El Tor Str. N16961 Length = 184

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 16  EKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG 75
           E +N+QINLE ++S +YL  SA  +       G +++ +  + EE +H  +L  Y+++ G
Sbjct: 17  EHLNEQINLEFFSSNLYLQXSAWCEDK--GFDGAAEFLRAHAVEEXQHXQRLFTYVSETG 74
Query: 76  GTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
               L  + AP R ++ +  E F    Q E+ + Q I
Sbjct: 75  ALPILGAIAAP-RHDFASLGEVFRETYQHEQKITQQI 110

>pdb|3EGM|A Chain A, Structural Basis Of Iron Transport Gating In Helicobacter Pylori Ferritin Length = 181

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 18  INKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGT 77
           +N+Q+N E+ +S +Y+SMS+      +   G+   F HA+ EE EHA KLI +LN+    
Sbjct: 24  LNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLF-LFDHAA-EEYEHAKKLIIFLNENNVP 81
Query: 78  LKLVDVKAPARQEWGTT---EEAFSHALQLEKDVNQVI 112
           ++L  + AP  +  G T   ++A+ H   + + +N ++
Sbjct: 82  VQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIV 119

>pdb|3QD8|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Bfrb Length = 181

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 10  FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIK 69
           FHA  +E+I+     E  A+  Y++++ +FD +   LP ++K+F   + EE  HA  L++
Sbjct: 11  FHALMQEQIHN----EFTAAQQYVAIAVYFDSE--DLPQLAKHFYSQAVEERNHAMMLVQ 64
Query: 70  YLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVN 109
           +L  R   +++  V    R ++    EA + AL  E+ V 
Sbjct: 65  HLLDRDLRVEIPGVDT-VRNQFDRPREALALALDQERTVT 103

>pdb|3OJ5|A Chain A, Mycobacterium Tuberculosis Ferritin Homolog, Bfrb Length = 189

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 10  FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIK 69
           FHA  +E+I+     E  A+  Y++++ +FD +   LP ++K+F   + EE  HA  L++
Sbjct: 11  FHALMQEQIHN----EFTAAQQYVAIAVYFDSE--DLPQLAKHFYSQAVEERNHAMMLVQ 64
Query: 70  YLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVN 109
           +L  R   +++  V    R ++    EA + AL  E+ V 
Sbjct: 65  HLLDRDLRVEIPGVDT-VRNQFDRPREALALALDQERTVT 103

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	120
2cih_A	183	Ferritin heavy chain; apoferritin, ferroxidase, DI	1e-52
1rcd_A	173	L ferritin; iron storage; 2.00A {Rana catesbeiana}	4e-52
3ka8_A	176	Ferritin, middle subunit; iron storage, DIIRON, ir	2e-51
3vnx_A	204	Ferritin; 4-helix bundle, iron storage, oxidoreduc	2e-50
3a68_A	212	Sferh-4, ferritin-4, chloroplastic; 4-helix bundle	6e-50
1vlg_A	176	Ferritin; TM1128, structural genomics, JCSG, prote	5e-49
2v2p_A	174	Ferritin light chain; metal transport, iron, haemi	2e-47
3kxu_A	191	Ferritin; iron storage protein, disorder, iron, me	5e-47
1z6o_M	191	Ferritin heavy chain; metal binding protein, iron	9e-47
3qz3_A	184	Ferritin; structural genomics, the center for stru	3e-46
3oj5_A	189	Ferritin family protein; ferroxidase, cytosol, oxi	3e-44
1s3q_A	173	Ferritin; ferroxidase, four helix bundle, iron sto	5e-44
2jd6_0	174	Ferritin homolog, ferritin; metal transport, iron,	4e-43
1krq_A	167	Ferritin; H-chain like four-helix bundle, binding	1e-42
3e6s_A	168	Ferritin; iron storage, ferroxidase, oxidoreductas	1e-42
1eum_A	165	Ferritin 1; ECFTNA, metal binding protein; 2.05A {	1e-41
3bvf_A	181	Ferritin; iron storage, metal-binding, oxidoreduct	4e-41
1z6o_A	212	Ferritin light chain; metal binding protein, iron	6e-34
3r2k_A	154	Bacterioferritin, BFR; bacterial ferritin, iron bi	6e-09
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	2e-08
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	3e-08
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	4e-07
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	4e-07
3fvb_A	182	Bacterioferritin; niaid, ssgcid, decode, structura	1e-06
1lko_A	191	Rubrerythrin all-iron(II) form; reduced form, DIIR	4e-06
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	1e-05
3gvy_A	161	Bacterioferritin; iron storage, DI-iron, ferroxida	2e-05
1j30_A	144	144AA long hypothetical rubrerythrin; sulerythrin,	4e-05
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	4e-05
4di0_A	144	Rubrerythrin; ssgcid, seattle structural genomics	1e-04

>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A Length = 183

 Score =  162 bits (413), Expect = 1e-52
 Identities = 62/111 (55%), Positives = 79/111 (71%)

Query: 2   AVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEES 61
           + SQVRQN+H ++E  IN+QINL+LYASYVYLSMS +FDRD VAL   +KYF H S EE 
Sbjct: 5   STSQVRQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEER 64

Query: 62  EHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           EHA KL+K  N+RGG + L D++ P   +W +   A   AL LEK+VNQ +
Sbjct: 65  EHAEKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLEKNVNQSL 115

>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A Length = 173

 Score =  160 bits (408), Expect = 4e-52
 Identities = 55/109 (50%), Positives = 78/109 (71%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH + E  +N+ +NL+ ++SYVYLSM+++F+RD VAL   +K+F+  S+EE EH
Sbjct: 3   SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEH 62

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           A KLI+Y N+RGG + L  V+ P R +W    EA   AL+L+K VNQ +
Sbjct: 63  AEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQAL 111

>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A Length = 176

 Score =  159 bits (404), Expect = 2e-51
 Identities = 65/110 (59%), Positives = 79/110 (71%)

Query: 3   VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESE 62
           VSQVRQN+H++ E  +N+ +NLELYASY Y SM A FDRD VAL  ++++FK  S EE E
Sbjct: 2   VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEERE 61

Query: 63  HAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           HA K +KY NKRGG + L D+K P R EWG T EA   ALQLEK VNQ +
Sbjct: 62  HAEKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQAL 111

>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa} Length = 204

 Score =  157 bits (399), Expect = 2e-50
 Identities = 52/116 (44%), Positives = 68/116 (58%), Gaps = 4/116 (3%)

Query: 1   MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           +  S  R  +H E E  IN+QIN+E   SYVY ++ ++F RD V LPG +K+FK ASDEE
Sbjct: 27  VTDSYARVEYHIECEAAINEQINIEYTISYVYHALHSYFARDNVGLPGFAKFFKEASDEE 86

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAP----ARQEWGTTEEAFSHALQLEKDVNQVI 112
            EHAH L+ Y  KRGG ++L  + AP    A  + G    A   AL LEK   Q +
Sbjct: 87  REHAHMLMDYQTKRGGRVELKPLAAPEMEFANDDKGEALYAMELALSLEKLNFQKL 142

>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A Length = 212

 Score =  156 bits (397), Expect = 6e-50
 Identities = 52/113 (46%), Positives = 71/113 (62%), Gaps = 4/113 (3%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           S  RQ +  E+E  +N+QIN+E   SYVY +M A+FDRD VAL G++K+FK +S+EE EH
Sbjct: 35  SLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREH 94

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPA----RQEWGTTEEAFSHALQLEKDVNQVI 112
           A KL++Y NKRGG +KL  +  P       + G    A   AL LEK  N+ +
Sbjct: 95  AEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKL 147

>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A* Length = 176

 Score =  153 bits (388), Expect = 5e-49
 Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 1   MAVSQVRQNFHA------ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFK 54
           M   ++  + H       +  + +N Q+N E+Y+SY+YLSM+ +FD +     G + + K
Sbjct: 1   MGSDKIHHHHHHMMVISEKVRKALNDQLNREIYSSYLYLSMATYFDAE--GFKGFAHWMK 58

Query: 55  HASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
             + EE  HA K  +Y+ +RGG ++L  ++ P    W   ++AF  AL+ E+ V Q I
Sbjct: 59  KQAQEELTHAMKFYEYIYERGGRVELEAIEKP-PSNWNGIKDAFEAALKHEEFVTQSI 115

>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ... Length = 174

 Score =  149 bits (377), Expect = 2e-47
 Identities = 47/109 (43%), Positives = 72/109 (66%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+  +FDRD VAL G+  +F+  + ++ + 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQG 61

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           A +L+K  N+RGG     D++ P++ EWGTT +A   A+ LEK +NQ +
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQAL 110

>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A Length = 191

 Score =  148 bits (376), Expect = 5e-47
 Identities = 49/109 (44%), Positives = 70/109 (64%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  + E  +N  +NL L ASY YLS+  +FDRD VAL G+S +F+  ++E+ E 
Sbjct: 3   SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREG 62

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
             +L+K  N+RGG     D+K PA  EWG T +A   A+ LEK +NQ +
Sbjct: 63  YERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQAL 111

>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1 Length = 191

 Score =  147 bits (374), Expect = 9e-47
 Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 7/119 (5%)

Query: 1   MAVSQVRQNF---HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHAS 57
           +   Q+ +++   H      + +QI +E+ AS  YL+M AHF +DVV  PG ++ F  A+
Sbjct: 5   VNPVQIPKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAA 64

Query: 58  DEESEHAHKLIKYLNKRGGTLK----LVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
            EE EHA KLI+YL  RG        L+ V+ P R  W    EA  HAL +E DV + I
Sbjct: 65  SEEREHAMKLIEYLLMRGELTNDVSSLLQVRPPTRSSWKGGVEALEHALSMESDVTKSI 123

>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} Length = 184

 Score =  146 bits (371), Expect = 3e-46
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 4   SQVRQNFH---AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEE 60
           + + Q F        E +N+QINLE ++S +YL MSA  +       G +++ +  + EE
Sbjct: 2   NAMNQEFFMLSQAMVEHLNEQINLEFFSSNLYLQMSAWCED--KGFDGAAEFLRAHAVEE 59

Query: 61  SEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
            +H  +L  Y+++ G    L  + AP R ++ +  E F    Q E+ + Q I
Sbjct: 60  MQHMQRLFTYVSETGALPILGAIAAP-RHDFASLGEVFRETYQHEQKITQQI 110

>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A Length = 189

 Score =  141 bits (358), Expect = 3e-44
 Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 3/106 (2%)

Query: 7   RQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHK 66
            +    +    + +QI+ E  A+  Y++++ +FD +   LP ++K+F   + EE  HA  
Sbjct: 4   YEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSE--DLPQLAKHFYSQAVEERNHAMM 61

Query: 67  LIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           L+++L  R   +++  V    R ++    EA + AL  E+ V   +
Sbjct: 62  LVQHLLDRDLRVEIPGVDTV-RNQFDRPREALALALDQERTVTDQV 106

>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A Length = 173

 Score =  140 bits (355), Expect = 5e-44
 Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 3/104 (2%)

Query: 9   NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLI 68
           +   +  E +N+QIN E+Y++Y+YLSM+++FD   + L G S + +    EE  HA K+ 
Sbjct: 3   SISEKMVEALNRQINAEIYSAYLYLSMASYFDS--IGLKGFSNWMRVQWQEELMHAMKMF 60

Query: 69  KYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
            ++++RGG +KL  V+ P   EW +   AF H  + E +V + I
Sbjct: 61  DFVSERGGRVKLYAVEEP-PSEWDSPLAAFEHVYEHEVNVTKRI 103

>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0 Length = 174

 Score =  138 bits (349), Expect = 4e-43
 Identities = 31/100 (31%), Positives = 59/100 (59%), Gaps = 3/100 (3%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
              + +N Q+N ELY++Y+Y +M+A+F+   + L G + + K  ++EE  HA +   Y+ 
Sbjct: 5   RMLKALNDQLNRELYSAYLYFAMAAYFED--LGLEGFANWMKAQAEEEIGHALRFYNYIY 62

Query: 73  KRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
            R G ++L ++  P  +EW +  +AF  A + EK +++ I
Sbjct: 63  DRNGRVELDEIPKP-PKEWESPLKAFEAAYEHEKFISKSI 101

>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1 Length = 167

 Score =  136 bits (346), Expect = 1e-42
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 10  FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIK 69
              E  + +N+QIN E+YA+ +YLSMS+    +  +L G   +    + EES+HA KLI 
Sbjct: 2   LSKEVVKLLNEQINKEMYAANLYLSMSSWCYEN--SLDGAGAFLFAHASEESDHAKKLIT 59

Query: 70  YLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           YLN+    ++L +VK P  Q + +  + F    + E+ + + I
Sbjct: 60  YLNETDSHVELQEVKQP-EQNFKSLLDVFEKTYEHEQFITKSI 101

>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} PDB: 3e6r_A Length = 168

 Score =  136 bits (346), Expect = 1e-42
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
           E  +  N+Q+  E  AS VYLS S  FD++     G++ Y    S EE EH    + + N
Sbjct: 4   ELLDLFNRQVTQEFTASQVYLSASIWFDQN--DWEGMAAYMLAESAEEREHGLGFVDFAN 61

Query: 73  KRGGTLKLVDVKAP-ARQEWGTTEEAFSHALQLEKDVNQVI 112
           KR   ++L  V AP +  EW + E+ +   L+LE+   + +
Sbjct: 62  KRNIPIELQAVPAPVSCAEWSSPEDVWQSILELEQANTRSL 102

>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1 Length = 165

 Score =  133 bits (338), Expect = 1e-41
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
           E  EK+N+Q+NLELY+S +Y  MSA          G + + +  + EE  H  +L  YL 
Sbjct: 5   EMIEKLNEQMNLELYSSLLYQQMSAWCSYH--TFEGAAAFLRRHAQEEMTHMQRLFDYLT 62

Query: 73  KRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
             G   ++  V++P   E+ + +E F    + E+ + Q I
Sbjct: 63  DTGNLPRINTVESP-FAEYSSLDELFQETYKHEQLITQKI 101

>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1 Length = 212

 Score =  116 bits (291), Expect = 6e-34
 Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 5/114 (4%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
                  H     ++     L L  SY YL  +A+F+       G SK FK  SDE    
Sbjct: 27  VYGEYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSK 86

Query: 64  AHKLIKYLNKRGGTLKLVDVKAP-----ARQEWGTTEEAFSHALQLEKDVNQVI 112
              +IK++ KRG  +                      EA + AL  +K++ +  
Sbjct: 87  TIDIIKHVTKRGDKMNFDQHSTMKTERKNYTAENHELEALAKALDTQKELAERA 140

>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A Length = 154

 Score = 50.0 bits (119), Expect = 6e-09
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 5/102 (4%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
           H E  + +N  +  EL A   Y   S  ++        + +   H  +EE++HA  L++ 
Sbjct: 4   HPEVIDYLNTLLTGELAARDQYFIHSRMYED--WGFSKLYERLNHEMEEETQHADALLRR 61

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           +    GT ++               E     L+LE+ V   +
Sbjct: 62  ILLLEGTPRMRPDDIHPGTTV---PEMLEADLKLERHVRAAL 100

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A* Length = 155

 Score = 48.4 bits (115), Expect = 2e-08
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 4/97 (4%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
                + +NK +  EL A   Y   +  ++     L  + K+  H S +E +HA KLIK 
Sbjct: 4   DKIVIQHLNKILGNELIAINQYFLHARMYED--WGLEKLGKHEYHESIDEMKHADKLIKR 61

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKD 107
           +    G   L ++      E   T+E     L+LE+ 
Sbjct: 62  ILFLEGLPNLQELGKLLIGE--HTKEMLECDLKLEQA 96

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A* Length = 174

 Score = 48.1 bits (114), Expect = 3e-08
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
             +    +N+Q+  EL A   Y   S   D        ++ + +  S +E  HA ++   
Sbjct: 6   DPDVLRLLNEQLTSELTAINQYFLHSKMQDN--WGFTELAAHTRAESFDEMRHAEEITDR 63

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           +    G      + +    +  T  E F   L +E DV   +
Sbjct: 64  ILLLDGLPNYQRIGSLRIGQ--TLREQFEADLAIEYDVLNRL 103

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1 Length = 161

 Score = 45.0 bits (106), Expect = 4e-07
 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 4/102 (3%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
            A+  E +N  +  EL A   Y       +     L  ++K  +  S EE  HA K+I  
Sbjct: 4   DAKVIEFLNAALRSELTAISQYWVHFRLQED--WGLAKMAKKSREESIEEMGHADKIIAR 61

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           +    G   L  +      E     E     L  E D  ++ 
Sbjct: 62  ILFLEGHPNLQKLDPLRIGE--GPRETLECDLAGEHDALKLY 101

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A* Length = 158

 Score = 45.0 bits (106), Expect = 4e-07
 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
             +    +NK +  EL A   Y   +  F      L  ++    H S +E +HA + I+ 
Sbjct: 4   DTKVINYLNKLLGNELVAINQYFLHARMFKN--WGLKRLNDVEYHESIDEMKHADRYIER 61

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKD 107
           +    G   L D+      E    EE     L LE D
Sbjct: 62  ILFLEGLPNLQDLGKLNIGE--DVEEMLRSDLALELD 96

>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308} Length = 182

 Score = 43.9 bits (103), Expect = 1e-06
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
             +  E++N+ + LEL A   Y       +        ++K  +  S EE  HA KLI  
Sbjct: 25  EPKVIERLNEALFLELGAVNQYWLHYRLLND--WGYTRLAKKEREESIEEMHHADKLIDR 82

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKD 107
           +    G   L  V      +    +E     L+ E D
Sbjct: 83  IIFLEGFPNLQTVSPLRIGQ--NVKEVLEADLKGEYD 117

>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A Length = 191

 Score = 42.8 bits (100), Expect = 4e-06
 Identities = 23/94 (24%), Positives = 30/94 (31%), Gaps = 6/94 (6%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
            TE+ I      E  A   Y        +D      IS  F   +D+E EHA +L K+L 
Sbjct: 8   RTEKNILTAFAGESQARNRYNYFGGQAKKD--GFVQISDIFAETADQEREHAKRLFKFLE 65

Query: 73  KRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEK 106
                  L  V A        T      +   E 
Sbjct: 66  G----GDLEIVAAFPAGIIADTHANLIASAAGEH 95

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A Length = 202

 Score = 41.7 bits (97), Expect = 1e-05
 Identities = 14/93 (15%), Positives = 27/93 (29%), Gaps = 5/93 (5%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
            T E +   I  E  A   Y + +            I++ F+  +  E  H       + 
Sbjct: 28  STLENLKAAIAGETGAHAKYTAFAKAAREQ--GYEQIARLFEATAAAELIHIGLEYALVA 85

Query: 73  KRGGTLKLVDVKAPARQEWGTTEEAFSHALQLE 105
           +     +   V AP+     + +         E
Sbjct: 86  EMEPGYEKPTVAAPSA---YSCDLNLISGANGE 115

>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} Length = 161

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 4/98 (4%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
            A+  E +N  +  EL A   Y       +        I+   +  S EE  HA KLI+ 
Sbjct: 4   DAKVIEYLNAALRSELTAVSQYWLHYRLQED--WGFGSIAHKSRKESIEEMHHADKLIQR 61

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDV 108
           +   GG   L  +      +  T  E     L  E D 
Sbjct: 62  IIFLGGHPNLQRLNPLRIGQ--TLRETLDADLAAEHDA 97

>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1 Length = 144

 Score = 39.5 bits (92), Expect = 4e-05
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 8/94 (8%)

Query: 12  AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYL 71
            +T E + +    E  A+  YL  +   D +    P I+   +  ++ E+ HA   + ++
Sbjct: 7   TKTAENLKQGFIGESMANRRYLYFAKRADEE--GYPEIAGLLRSIAEGETAHAFGHLDFI 64

Query: 72  NKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLE 105
            + G             +  GT E+    A+  E
Sbjct: 65  RQGGL------TDPATDKPIGTLEQMIESAIAGE 92

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A Length = 170

 Score = 39.7 bits (92), Expect = 4e-05
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
           T++ + +    E  A   YL  +   +++    P I+K F+  +  E  HA      L 
Sbjct: 6  MTKKFLEEAFAGESMAHMRYLIFAEKAEQE--GFPNIAKLFRAIAYAEFVHAKNHFIALG 63

Query: 73 KRGGTLK-LVDVKAPARQEW 91
          K G T + L         E 
Sbjct: 64 KLGKTPENLQMGIEGETFEV 83

>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei} Length = 144

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
          +TEE +      E  A+  YL  ++  D +      I+  F+  ++ E+ HAH  ++YL 
Sbjct: 12 KTEENLKYAFAGESQANRRYLYFASKADVE--GQNDIAALFRSTAEGETGHAHGHLEYLE 69

Query: 73 KRGGT 77
            G  
Sbjct: 70 AVGDP 74

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	120
3ka8_A	176	Ferritin, middle subunit; iron storage, DIIRON, ir	100.0
3kxu_A	191	Ferritin; iron storage protein, disorder, iron, me	100.0
1rcd_A	173	L ferritin; iron storage; 2.00A {Rana catesbeiana}	100.0
2cih_A	183	Ferritin heavy chain; apoferritin, ferroxidase, DI	100.0
2v2p_A	174	Ferritin light chain; metal transport, iron, haemi	100.0
1z6o_M	191	Ferritin heavy chain; metal binding protein, iron	100.0
3vnx_A	204	Ferritin; 4-helix bundle, iron storage, oxidoreduc	100.0
3a68_A	212	Sferh-4, ferritin-4, chloroplastic; 4-helix bundle	100.0
1z6o_A	212	Ferritin light chain; metal binding protein, iron	100.0
3e6s_A	168	Ferritin; iron storage, ferroxidase, oxidoreductas	100.0
1s3q_A	173	Ferritin; ferroxidase, four helix bundle, iron sto	100.0
3qz3_A	184	Ferritin; structural genomics, the center for stru	100.0
3uno_A	189	Probable bacterioferritin BFRB; ferroxidase activi	100.0
1eum_A	165	Ferritin 1; ECFTNA, metal binding protein; 2.05A {	100.0
1krq_A	167	Ferritin; H-chain like four-helix bundle, binding	100.0
3bvf_A	181	Ferritin; iron storage, metal-binding, oxidoreduct	99.97
4am5_A	159	Bacterioferritin; metal binding protein, ferroxida	99.96
1vlg_A	176	Ferritin; TM1128, structural genomics, JCSG, prote	99.96
2jd6_0	174	Ferritin homolog, ferritin; metal transport, iron,	99.94
3oj5_A	189	Ferritin family protein; ferroxidase, cytosol, oxi	99.93
3uoi_A	161	Bacterioferritin, BFR; structural genomics, TB str	99.89
3r2k_A	154	Bacterioferritin, BFR; bacterial ferritin, iron bi	99.89
3gvy_A	161	Bacterioferritin; iron storage, DI-iron, ferroxida	99.88
1lko_A	191	Rubrerythrin all-iron(II) form; reduced form, DIIR	99.88
3fvb_A	182	Bacterioferritin; niaid, ssgcid, decode, structura	99.88
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	99.87
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	99.87
1nfv_A	179	Bacterioferritin; 24 subunits in the active molecu	99.87
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	99.86
2vzb_A	170	Putative bacterioferritin-related protein; DPS, DP	99.85
1j30_A	144	144AA long hypothetical rubrerythrin; sulerythrin,	99.85
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	99.85
2c41_A	158	DPS family DNA-binding stress response protein; ir	99.84
2qqy_A	149	Sigma B operon; dodecameric alpha-helical, ferriti	99.84
1ji5_A	142	DLP-1; dodecamer, four-helix bundle, metal transpo	99.83
2vxx_A	192	Starvation induced DNA binding protein; stress res	99.81
1n1q_A	149	DPS protein; four-helix bundle, unknown function;	99.8
1jig_A	146	DLP-2; dodecamer, four-helix bundle, metal transpo	99.79
2d5k_A	156	DPS, DPS family protein; four helix bundle, metal	99.79
2clb_A	188	DPS-like protein; DI-iron carboxylate, hypothetica	99.78
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	99.67
1tjo_A	182	Iron-rich DPSA-homolog protein; ferritin, low-iron	99.64
1o9r_A	162	Agrobacterium tumefaciens DPS; iron-binding protei	99.35
2bk6_A	156	Non-heme iron-containing ferritin; DPS (DNA bindin	99.35
2fjc_A	156	Antigen TPF1; mini ferritin, iron binding protein,	99.35
2chp_A	153	MRGA, metalloregulation DNA-binding stress protein	99.34
2z90_A	161	Starvation-inducible DNA-binding protein or FINE t	99.33
2yjk_A	161	AFP, DPS; metal-binding protein, iron uptake, ferr	99.32
3ak8_A	167	DNA protection during starvation protein; DPS-like	99.31
2yw6_A	183	DNA protection during starvation protein; DNA-bind	99.29
2c2u_A	207	DPS, DNA-binding stress response protein; DNA-bind	99.28
2c2j_A	211	DNA-binding stress response protein; DNA-binding p	99.26
2wlu_A	175	DPS-like peroxide resistance protein; DNA-binding,	99.25
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	99.24
2cf7_A	165	DPR; peroxide resistance, DPS-family, ferritin-lik	99.23
2xgw_A	199	Peroxide resistance protein; metal binding protein	99.23
4di0_A	144	Rubrerythrin; ssgcid, seattle structural genomics	99.19
3iq1_A	159	DPS family protein; csgid, SAD, niaid, metal trans	99.11
3kwo_A	152	Putative bacterioferritin; alpha-helix, bacterial	99.09
4eve_A	164	Neutrophil-activating protein; dodecamer, four-hel	99.08
2pyb_A	151	NAPA, neutrophil activating protein; ferritin, DPS	99.07
2oh3_A	167	Rubrerythrin, COG1633: uncharacterized conserved p	98.83
2fzf_A	175	Hypothetical protein; structural genomics, southea	98.75
4etr_A	153	Putative uncharacterized protein; DUF2383, domain	98.39
4a25_A	169	DPS, ferritin DPS family protein; metal binding pr	98.16
1vjx_A	157	Putative ferritin-like DIIRON-carboxylate protein;	98.13
3qhb_A	179	Symerythrin, ORF180; four-helix bundle, carboxylat	98.05
3fse_A	365	Two-domain protein containing DJ-1/THIJ/PFPI-like	97.91
1o9i_A	266	Pseudocatalase; oxidoreductase, hexamer, dimangane	97.2
3k6c_A	95	Uncharacterized protein NE0167; structural genomic	97.13
1zpy_A	95	Hypothetical protein NE0167; structural genomics,	97.12
2v8t_A	302	Manganese-containing pseudocatalase; manganese cat	97.03
1zs3_A	182	Lactococcus lactis Mg1363 DPSA; oxidative stress,	96.92
1zuj_A	179	Hypothetical protein llacc01001955; oxidative stre	96.79
2ib0_A	170	Conserved hypothetical alanine rich protein; 4-hel	96.34
3hl1_A	317	Ferritin like protein; structural genomics, joint	95.6
1vjx_A	157	Putative ferritin-like DIIRON-carboxylate protein;	95.49
2itb_A	206	TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative	95.12
4di0_A	144	Rubrerythrin; ssgcid, seattle structural genomics	95.08
2fzf_A	175	Hypothetical protein; structural genomics, southea	94.87
1j30_A	144	144AA long hypothetical rubrerythrin; sulerythrin,	94.79
2e0z_A	345	Virus-like particle; bacteriophage, HK97; 3.60A {P	94.06
2qqy_A	149	Sigma B operon; dodecameric alpha-helical, ferriti	93.18
4am5_A	159	Bacterioferritin; metal binding protein, ferroxida	92.41
3qhb_A	179	Symerythrin, ORF180; four-helix bundle, carboxylat	92.39
2oh3_A	167	Rubrerythrin, COG1633: uncharacterized conserved p	91.56
2hz8_A	115	De novo designed DIIRON protein; four-helix bundle	90.59
3uoi_A	161	Bacterioferritin, BFR; structural genomics, TB str	90.01
1nfv_A	179	Bacterioferritin; 24 subunits in the active molecu	89.71
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	89.63
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	89.13
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	88.51
3gvy_A	161	Bacterioferritin; iron storage, DI-iron, ferroxida	88.41
2v0o_A	276	FCHO2, FCH domain only protein 2; lipid-binding pr	88.01
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	87.59
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	87.15
3r2k_A	154	Bacterioferritin, BFR; bacterial ferritin, iron bi	86.71
1krq_A	167	Ferritin; H-chain like four-helix bundle, binding	86.24
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	85.98
1eum_A	165	Ferritin 1; ECFTNA, metal binding protein; 2.05A {	85.92
3fvb_A	182	Bacterioferritin; niaid, ssgcid, decode, structura	85.02
1lko_A	191	Rubrerythrin all-iron(II) form; reduced form, DIIR	84.95
2vzb_A	170	Putative bacterioferritin-related protein; DPS, DP	81.41

>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A

Probab=100.00  E-value=6.4e-42  Score=242.73  Aligned_cols=117  Identities=56%  Similarity=0.863  Sum_probs=113.1

Q ss_pred             CCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy12315          1 MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL   80 (120)
Q Consensus         1 ~~~s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~   80 (120)
                      |+ ||+||||+++|+++||+||+.||+|||+|++||+||+++++||+||++||+++|.||++||++|++||++|||.|++
T Consensus         1 ~~-~~~rqn~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l   79 (176)
T 3ka8_A            1 MV-SQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVL   79 (176)
T ss_dssp             -C-CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             CC-CccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeee
Confidence            77 99999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         81 VDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        81 ~~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ++|++|...+|+++.++|+.+|++|+.+++.|++|++.
T Consensus        80 ~~i~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~l  117 (176)
T 3ka8_A           80 QDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKL  117 (176)
T ss_dssp             CCCCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999976789999999999999999999999999863

>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A

Probab=100.00  E-value=5.5e-42  Score=245.98  Aligned_cols=117  Identities=43%  Similarity=0.721  Sum_probs=113.1

Q ss_pred             CCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy12315          1 MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL   80 (120)
Q Consensus         1 ~~~s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~   80 (120)
                      |+ ||+||||+++|+++||+|||.||+|||+|++||+||+++++||+||++||+++|.|||+||++|++||++|||.|.+
T Consensus         1 ~~-s~~rqn~~~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~yi~~rgG~~~l   79 (191)
T 3kxu_A            1 MS-SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALF   79 (191)
T ss_dssp             -C-CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             CC-CccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence            67 99999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         81 VDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        81 ~~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ++|++|..++|+++.++|+.+|++|+.+++.|++|++.
T Consensus        80 ~~i~~p~~~~~~s~~e~le~aL~~Ek~v~~~l~~l~~l  117 (191)
T 3kxu_A           80 QDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHAL  117 (191)
T ss_dssp             CCCCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999976689999999999999999999999999863

>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A

Probab=100.00  E-value=7.1e-40  Score=231.48  Aligned_cols=117  Identities=48%  Similarity=0.798  Sum_probs=111.4

Q ss_pred             CCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy12315          1 MAVSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL   80 (120)
Q Consensus         1 ~~~s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~   80 (120)
                      |+ |++||||+++|+++||+||+.||+|||+|++||+||++++++++||++||+++|.||++||++|++||++|||+|.+
T Consensus         1 ~~-~~~rqn~~~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l   79 (173)
T 1rcd_A            1 ME-SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFL   79 (173)
T ss_dssp             ---CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             CC-CcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeec
Confidence            66 99999999999999999999999999999999999998889999999999999999999999999999999999999


Q ss_pred             cccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         81 VDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        81 ~~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ++|++|....|+++.++|+.+|++|+.+++.|+++++.
T Consensus        80 ~~i~~p~~~~~~~~~e~le~aL~~E~~v~~~l~~l~~~  117 (173)
T 1rcd_A           80 QSVEKPERDDWANGLEALQTALKLQKSVNQALLDLHAV  117 (173)
T ss_dssp             CCCCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999955589999999999999999999999999874

>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A

Probab=100.00  E-value=1.6e-39  Score=231.69  Aligned_cols=116  Identities=53%  Similarity=0.815  Sum_probs=112.1

Q ss_pred             CCcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q psy12315          3 VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD   82 (120)
Q Consensus         3 ~s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~   82 (120)
                      .|++|||++++|+++||+||+.||+|||+|++||+||++++++|+||++||+++|.|||+||++|++||++|||+|.+++
T Consensus         6 ~s~~rq~~~~~~~~~LN~qi~~El~As~~Yl~~a~~~~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~   85 (183)
T 2cih_A            6 TSQVRQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQD   85 (183)
T ss_dssp             CCTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCC
Confidence            39999999999999999999999999999999999999888999999999999999999999999999999999999999


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |++|..++|+++.++|+.+|++|+.+++.|++|++.
T Consensus        86 i~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~~  121 (183)
T 2cih_A           86 IQKPDCDDWESGLNAMECALHLEKNVNQSLLELHKL  121 (183)
T ss_dssp             CCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999976679999999999999999999999999874

>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...

Probab=100.00  E-value=3.5e-39  Score=228.08  Aligned_cols=115  Identities=41%  Similarity=0.712  Sum_probs=111.1

Q ss_pred             CcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q psy12315          4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDV   83 (120)
Q Consensus         4 s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i   83 (120)
                      |++||||+++|+++||+||+.||+|||+|++||+||+++++++|||++||+++|.|||+||++|++||++|||+|.+++|
T Consensus         2 ~~~~qn~~~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i   81 (174)
T 2v2p_A            2 SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDL   81 (174)
T ss_dssp             CCSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Confidence            89999999999999999999999999999999999998779999999999999999999999999999999999999999


Q ss_pred             CCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         84 KAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        84 ~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ++|....|+++.++|+.+|++|+.+++.|++|++.
T Consensus        82 ~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~~  116 (174)
T 2v2p_A           82 QKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHAL  116 (174)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99954589999999999999999999999999874

>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1

Probab=100.00  E-value=4.6e-39  Score=230.67  Aligned_cols=115  Identities=39%  Similarity=0.621  Sum_probs=111.8

Q ss_pred             CcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc----c
Q psy12315          4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTL----K   79 (120)
Q Consensus         4 s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v----~   79 (120)
                      |++||+++++|+++||+||+.||+|||+|++||+||+++++|||||++||+++|.|||+||++|++||++|||.|    .
T Consensus        11 ~~~~~~~~~~~~~~LN~qin~El~As~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~HA~kli~yi~~rGg~~~~~~~   90 (191)
T 1z6o_M           11 PKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSS   90 (191)
T ss_dssp             CCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGG
T ss_pred             cHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhh
Confidence            899999999999999999999999999999999999988899999999999999999999999999999999999    9


Q ss_pred             ccccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         80 LVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        80 ~~~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      +++|++|...+|+++.++|+.+|++|+.+++.|++|++.
T Consensus        91 l~~i~~p~~~~~~~~~e~le~aL~~Ek~v~~~i~~l~~~  129 (191)
T 1z6o_M           91 LLQVRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKA  129 (191)
T ss_dssp             GCCCCCCSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999976799999999999999999999999999874

>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa}

Probab=100.00  E-value=6.6e-39  Score=231.99  Aligned_cols=116  Identities=44%  Similarity=0.611  Sum_probs=110.6

Q ss_pred             CCcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q psy12315          3 VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD   82 (120)
Q Consensus         3 ~s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~   82 (120)
                      .|++||||+++|+++||+|||.||+|||+|++||+||+++++||+||++||+++|.|||+||++|++||++|||.|.+++
T Consensus        29 ~s~~rq~~~~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~g~a~~f~~~s~EE~~HA~kLi~yi~~rGG~~~l~~  108 (204)
T 3vnx_A           29 DSYARVEYHIECEAAINEQINIEYTISYVYHALHSYFARDNVGLPGFAKFFKEASDEEREHAHMLMDYQTKRGGRVELKP  108 (204)
T ss_dssp             SCSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             cccceecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC
Confidence            38999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCc----CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         83 VKAPAR----QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        83 i~~p~~----~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |++|..    .+|+++.++|+.+|++|+.+++.|++|++.
T Consensus       109 i~~p~~~~~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~l  148 (204)
T 3vnx_A          109 LAAPEMEFANDDKGEALYAMELALSLEKLNFQKLQALQAI  148 (204)
T ss_dssp             CCCCCCCCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999975    256788999999999999999999999863

>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A

Probab=100.00  E-value=2e-37  Score=225.42  Aligned_cols=116  Identities=45%  Similarity=0.674  Sum_probs=110.0

Q ss_pred             CCcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q psy12315          3 VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD   82 (120)
Q Consensus         3 ~s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~   82 (120)
                      .|++|||++++|+++||+||+.||+|||+|++||+||++++++|+||++||+++|.|||+||++|++||++|||+|.+++
T Consensus        34 ~s~~rq~~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~~~v~l~g~a~~f~~~s~EE~~HA~kl~~yi~~rGG~~~l~~  113 (212)
T 3a68_A           34 ASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQS  113 (212)
T ss_dssp             SCSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             cCcccCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC
Confidence            49999999999999999999999999999999999999877899999999999999999999999999999999999999


Q ss_pred             cCCCCc----CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         83 VKAPAR----QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        83 i~~p~~----~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |++|..    .+|+++.++|+.+|++|+.+++.|++|++.
T Consensus       114 i~~p~~~~~~~e~~~~~e~le~aL~~Ek~v~~~l~~l~~~  153 (212)
T 3a68_A          114 IVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSV  153 (212)
T ss_dssp             BCCCCCCCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999964    356789999999999999999999999874

>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1

Probab=100.00  E-value=3.5e-36  Score=218.80  Aligned_cols=112  Identities=25%  Similarity=0.335  Sum_probs=106.2

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC
Q psy12315          7 RQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAP   86 (120)
Q Consensus         7 ~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p   86 (120)
                      +.+.+++|+++||+||+.||+|||+|++||+||++++++||||++||+++|.|||+||++||+||++|||.|.+++|++|
T Consensus        30 ~~~~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~dd~~l~gfa~~f~~~s~EE~~HA~kli~yi~~rGg~~~l~~i~~p  109 (212)
T 1z6o_A           30 EYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQHSTM  109 (212)
T ss_dssp             TTTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCS
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccccccccc
Confidence            45678899999999999999999999999999998899999999999999999999999999999999999999999999


Q ss_pred             CcCccCC-----HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         87 ARQEWGT-----TEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        87 ~~~~~~~-----~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ...+|++     ++++|+.+|++|+.+++.|++|++.
T Consensus       110 ~~~~~~~~~~~~~~e~le~aL~~Ek~vt~~l~~l~~~  146 (212)
T 1z6o_A          110 KTERKNYTAENHELEALAKALDTQKELAERAFYIHRE  146 (212)
T ss_dssp             CCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6457877     9999999999999999999999874

>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A

Probab=100.00  E-value=1.5e-35  Score=208.58  Aligned_cols=106  Identities=31%  Similarity=0.501  Sum_probs=101.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCC-cC
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPA-RQ   89 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~-~~   89 (120)
                      +++|+++||+|||.||+|||+|++||+||++  ++|+||++||+++|.||++||++|++||++|||+|.+++|++|. ..
T Consensus         2 ~~~v~~~LN~qin~El~As~~Yl~ma~~f~~--~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~   79 (168)
T 3e6s_A            2 SEELLDLFNRQVTQEFTASQVYLSASIWFDQ--NDWEGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCA   79 (168)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCCCCccc
Confidence            6799999999999999999999999999994  57999999999999999999999999999999999999999996 35


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      +|+++.++|+.+|++|+.+++.|++|++.
T Consensus        80 ~~~~~~e~le~aL~~Ek~v~~~l~~l~~l  108 (168)
T 3e6s_A           80 EWSSPEDVWQSILELEQANTRSLLNLAEA  108 (168)
T ss_dssp             TCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999863

>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A

Probab=100.00  E-value=3.6e-34  Score=202.29  Aligned_cols=107  Identities=35%  Similarity=0.628  Sum_probs=103.2

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR   88 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~   88 (120)
                      +++++|+++||+||+.||+||++|++||+||+  ++|+|||++||+++|.||++||++|++||++|||+|.+++|++| .
T Consensus         3 m~~~~v~~~LN~qi~~El~as~~Yl~~a~~~~--~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p-~   79 (173)
T 1s3q_A            3 SISEKMVEALNRQINAEIYSAYLYLSMASYFD--SIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEP-P   79 (173)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-C
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-C
Confidence            57899999999999999999999999999999  68999999999999999999999999999999999999999999 4


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 ~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ..|+++.++|+.+|++|+.+++.|+++++.
T Consensus        80 ~~~~~~~e~le~aL~~E~~v~~~~~~l~~~  109 (173)
T 1s3q_A           80 SEWDSPLAAFEHVYEHEVNVTKRIHELVEM  109 (173)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999874

>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1

Probab=100.00  E-value=1.2e-33  Score=201.52  Aligned_cols=110  Identities=26%  Similarity=0.421  Sum_probs=104.6

Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCC
Q psy12315          6 VRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKA   85 (120)
Q Consensus         6 ~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~   85 (120)
                      ...+++++|+++||+||+.||+|+|+|++||+||+  +++++||++||+++|.||++||++|++||++|||+|.+++|++
T Consensus         7 ~~~m~~~~v~~~LN~qin~EL~as~~Yl~~a~~f~--~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~i~~   84 (184)
T 3qz3_A            7 EFFMLSQAMVEHLNEQINLEFFSSNLYLQMSAWCE--DKGFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAA   84 (184)
T ss_dssp             --CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCC
T ss_pred             CeeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCC
Confidence            35678999999999999999999999999999999  8999999999999999999999999999999999999999999


Q ss_pred             CCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         86 PARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        86 p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |. .+|+++.++|+.+|++|+.+++.|++|++.
T Consensus        85 p~-~~~~~~~e~le~aL~~Ek~v~~~l~~l~~l  116 (184)
T 3qz3_A           85 PR-HDFASLGEVFRETYQHEQKITQQINKLAHV  116 (184)
T ss_dssp             CC-CCCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc-cCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            96 589999999999999999999999999864

>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A

Probab=100.00  E-value=8.3e-34  Score=203.14  Aligned_cols=108  Identities=24%  Similarity=0.333  Sum_probs=101.4

Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCC
Q psy12315          8 QNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPA   87 (120)
Q Consensus         8 ~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~   87 (120)
                      ++++++|+++||+||+.||+|||+|++||+||+  +++|+||++||+++|.||++||++|++||++|||.|++++|++| 
T Consensus         5 ~~~~~~v~~~LN~qi~~El~As~~Yl~~a~~f~--~~~l~g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p-   81 (189)
T 3uno_A            5 EGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFD--SEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTV-   81 (189)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCC-
Confidence            478899999999999999999999999999999  56899999999999999999999999999999999999999999 


Q ss_pred             cCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         88 RQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        88 ~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ..+|+++.++|+.+|++|+.+++.|++|++.
T Consensus        82 ~~~~~s~~e~le~aL~~Ek~v~~~l~~l~~l  112 (189)
T 3uno_A           82 RNQFDRPREALALALDQERTVTDQVGRLTAV  112 (189)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5589999999999999999999999999864

>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1

Probab=100.00  E-value=6.2e-33  Score=194.23  Aligned_cols=107  Identities=29%  Similarity=0.488  Sum_probs=102.4

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR   88 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~   88 (120)
                      +++++|+++||+||+.|++|+++|++||.||+  ++|+|||++||+.+|.||++||++|++||++|||.|.+++|++|..
T Consensus         1 m~~~~~~~~LN~~i~~El~A~~~Yl~~a~~~~--~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~l~~i~~p~~   78 (165)
T 1eum_A            1 MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCS--YHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFA   78 (165)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCC
Confidence            47899999999999999999999999999999  7899999999999999999999999999999999999999999965


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 ~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                       .|+++.++|+.+|++|+.+++.|.++++.
T Consensus        79 -~~~~~~e~l~~al~~E~~~~~~~~~l~~~  107 (165)
T 1eum_A           79 -EYSSLDELFQETYKHEQLITQKINELAHA  107 (165)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             89999999999999999999999999864

>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1

Probab=100.00  E-value=3.9e-32  Score=190.58  Aligned_cols=107  Identities=32%  Similarity=0.479  Sum_probs=102.4

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR   88 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~   88 (120)
                      +++++|+++||+||+.|++|+++|++||.||+  ++|++||++||+.+|.||++||++|++||++|||.|.+++|++| .
T Consensus         1 m~~~~~~~~Ln~~i~~El~A~~~Yl~~a~~~~--~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p-~   77 (167)
T 1krq_A            1 MLSKEVVKLLNEQINKEMYAANLYLSMSSWCY--ENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQP-E   77 (167)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCC-C
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--HcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-C
Confidence            46899999999999999999999999999999  67999999999999999999999999999999999999999999 4


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 ~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ..|+++.++|+.+|++|+.+++.|.++++.
T Consensus        78 ~~~~~~~e~l~~al~~E~~~~~~~~~l~~~  107 (167)
T 1krq_A           78 QNFKSLLDVFEKTYEHEQFITKSINTLVEH  107 (167)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999864

>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*

Probab=99.96  E-value=2.1e-28  Score=169.96  Aligned_cols=105  Identities=18%  Similarity=0.125  Sum_probs=99.9

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .++++++.||++++.|++|+++|++||.||+  ++|++|+++||+.+|.+|++||++|++||++|||.|.++++++|.  
T Consensus         3 ~~~kvi~~LN~~l~~El~A~~~Y~~~a~~~~--~~g~~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~~~--   78 (159)
T 4am5_A            3 GDQKVIEYLNRGLRSELTAVSQYWLHYRMLE--DWGYKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLR--   78 (159)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC--
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccc--
Confidence            3789999999999999999999999999999  889999999999999999999999999999999999999998774  


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .|+++.++|+.++++|+.+++.|+++++.
T Consensus        79 ~~~~~~e~l~~~l~~E~~~~~~~~~~~~~  107 (159)
T 4am5_A           79 IGQTVKEVLESDLAAEREARALYQEGAAY  107 (159)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            69999999999999999999999998763

>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*

Probab=99.96  E-value=2.3e-28  Score=172.50  Aligned_cols=107  Identities=33%  Similarity=0.612  Sum_probs=102.6

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR   88 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~   88 (120)
                      |++++++++||++++.|++|+|+|++||.||+  +++++|+++||+.+|.||++||++|++||++|||.|.+++|+.|. 
T Consensus        15 ~~~~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~--~~~~~~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~~p~-   91 (176)
T 1vlg_A           15 VISEKVRKALNDQLNREIYSSYLYLSMATYFD--AEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPP-   91 (176)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC-
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCC-
Confidence            68999999999999999999999999999999  789999999999999999999999999999999999999999994 


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 ~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ..|.++.++|+.+|++|+.+++.++++++.
T Consensus        92 ~~~~~~~e~le~~l~~E~~v~~~~~~l~~~  121 (176)
T 1vlg_A           92 SNWNGIKDAFEAALKHEEFVTQSIYNILEL  121 (176)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999998863

>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0

Probab=99.94  E-value=2.2e-26  Score=161.50  Aligned_cols=106  Identities=29%  Similarity=0.568  Sum_probs=100.9

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      +++++++.||++++.|++++++|++|++||+  +++++|+++||+.+|.+|++||++|++||++|||.|.++.|+.|. .
T Consensus         2 ~~~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~--~~~~~~l~~~f~~~a~ee~~had~laeri~~lGg~p~~~~i~~~~-~   78 (174)
T 2jd6_0            2 LSERMLKALNDQLNRELYSAYLYFAMAAYFE--DLGLEGFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPP-K   78 (174)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC-C
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC-c
Confidence            5789999999999999999999999999998  679999999999999999999999999999999999999999994 4


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .|.++.++|+.++++|+.+++.++++++.
T Consensus        79 ~~~~~~e~l~~~l~~E~~~~~~~~~~~~~  107 (174)
T 2jd6_0           79 EWESPLKAFEAAYEHEKFISKSIYELAAL  107 (174)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            79999999999999999999999998763

>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A

Probab=99.93  E-value=1.8e-25  Score=159.16  Aligned_cols=109  Identities=23%  Similarity=0.308  Sum_probs=100.1

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC
Q psy12315          7 RQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAP   86 (120)
Q Consensus         7 ~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p   86 (120)
                      ..++++++++.||++++.|+.++++|+.+++||+  +++++|+++||+.+|.+|++||++|++||+.|||.|.++.|+.|
T Consensus         4 ~~m~~~~v~~~LN~~la~El~a~~~Yl~~a~~~~--~~gf~~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~~~   81 (189)
T 3oj5_A            4 YEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFD--SEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTV   81 (189)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCC
Confidence            3478889999999999999999999999999998  56899999999999999999999999999999999999999999


Q ss_pred             CcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         87 ARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        87 ~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      . ..|.++.++|+.++++|+.+++.++++++.
T Consensus        82 ~-~~~~~~~e~l~~~l~~E~~~~~~~~~l~~~  112 (189)
T 3oj5_A           82 R-NQFDRPREALALALDQERTVTDQVGRLTAV  112 (189)
T ss_dssp             C-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4 479999999999999999999999998763

>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*

Probab=99.89  E-value=1.4e-22  Score=139.89  Aligned_cols=104  Identities=19%  Similarity=0.119  Sum_probs=98.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      -++++++.||++++.|+.++++|++++.+|+  +++++++++||+.++.+|++||++|++|++.+||.|.++.+++|.. 
T Consensus         5 ~~~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Had~l~e~i~~lGg~p~~~~~~~~~~-   81 (161)
T 3uoi_A            5 GDPDVLRLLNEQLTSELTAINQYFLHSKMQD--NWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI-   81 (161)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCCCCC-
Confidence            3788999999999999999999999999999  7899999999999999999999999999999999999998888854 


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       ..++.++|+.++++|+.+++.++++++
T Consensus        82 -~~~~~e~l~~~l~~E~~~~~~~~~~~~  108 (161)
T 3uoi_A           82 -GQTLREQFEADLAIEYDVLNRLKPGIV  108 (161)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             379999999999999999999999875

>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A

Probab=99.89  E-value=1.7e-22  Score=138.59  Aligned_cols=104  Identities=21%  Similarity=0.239  Sum_probs=96.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .++++++.||++++.|+.++++|++++.+|+  +++++|+++||+.++.+|++||++|++||+.+||.|.+ +++++.  
T Consensus         3 ~~~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~had~l~eri~~lGg~p~~-~~~~~~--   77 (154)
T 3r2k_A            3 GHPEVIDYLNTLLTGELAARDQYFIHSRMYE--DWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRM-RPDDIH--   77 (154)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCCCCC--
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCCCC--
Confidence            3788999999999999999999999999998  78999999999999999999999999999999999999 666442  


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .+.++.++|+.++++|+.+++.++++++.
T Consensus        78 ~~~~~~e~l~~~l~~E~~~~~~~~~~~~~  106 (154)
T 3r2k_A           78 PGTTVPEMLEADLKLERHVRAALAKGIAL  106 (154)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45599999999999999999999998864

>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1

Probab=99.88  E-value=8.4e-22  Score=136.05  Aligned_cols=105  Identities=24%  Similarity=0.155  Sum_probs=98.3

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .++++++.||++++.|+.++++|++++.+|+  +++++++++||+.++.+|++||++|++||+.+||.|.++++++|.  
T Consensus         3 ~~~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Had~l~eri~~lGg~p~~~~~~~~~--   78 (161)
T 3gvy_A            3 GDAKVIEYLNAALRSELTAVSQYWLHYRLQE--DWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNPLR--   78 (161)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCC--
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCccCCCCCCC--
Confidence            3678999999999999999999999999998  789999999999999999999999999999999999998887774  


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .+.++.++|+.++++|+.++..++++++.
T Consensus        79 ~~~~~~e~l~~~l~~E~~~~~~~~~~~~~  107 (161)
T 3gvy_A           79 IGQTLRETLDADLAAEHDARTLYIEARDH  107 (161)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56899999999999999999999998763

>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A

Probab=99.88  E-value=3.4e-22  Score=142.99  Aligned_cols=100  Identities=26%  Similarity=0.310  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCccC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWG   92 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~~   92 (120)
                      ++++.||+|++.|++|++.|++||.|++  +.|++|+|+||+.+|.+|+.||+++++||+  ||.|.++.+. |. ..|+
T Consensus         8 ~t~~~Ln~a~~~E~~A~~~Yl~~A~~a~--~~G~~~iA~~f~~~A~eE~~HA~~~~~~l~--gg~~~i~~~~-p~-~~~~   81 (191)
T 1lko_A            8 RTEKNILTAFAGESQARNRYNYFGGQAK--KDGFVQISDIFAETADQEREHAKRLFKFLE--GGDLEIVAAF-PA-GIIA   81 (191)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHCC--SSCCCCCCCC-CC-CCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCccccCcC-Cc-cccC
Confidence            7899999999999999999999999999  569999999999999999999999999999  9999999955 53 3799


Q ss_pred             CHHHHHHHHHHHH-HHHHHHHHHHHHh
Q psy12315         93 TTEEAFSHALQLE-KDVNQVIIYFFTS  118 (120)
Q Consensus        93 ~~~~~l~~aL~~E-k~v~~~l~~l~~~  118 (120)
                      |+.+.|+.++++| +.+|..|.++.+.
T Consensus        82 s~~e~l~~al~~E~~e~t~~y~~~~~~  108 (191)
T 1lko_A           82 DTHANLIASAAGEHHEYTEMYPSFARI  108 (191)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            9999999999999 9999999988753

>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}

Probab=99.88  E-value=1.1e-21  Score=138.81  Aligned_cols=104  Identities=22%  Similarity=0.107  Sum_probs=98.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .++++++.||++++.|+.++++|++++.+|+  +++++++++||+.++.+|++||++|++||+.+||.|.++++++|.. 
T Consensus        24 ~~~~~~~~LN~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~~~~~-  100 (182)
T 3fvb_A           24 GEPKVIERLNEALFLELGAVNQYWLHYRLLN--DWGYTRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSPLRI-  100 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCCCCCC-
Confidence            4889999999999999999999999999998  8899999999999999999999999999999999999988887753 


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       ..++.++|+.+++.|+.++..++++++
T Consensus       101 -~~~~~e~l~~~l~~E~~~~~~y~~~i~  127 (182)
T 3fvb_A          101 -GQNVKEVLEADLKGEYDARASYKESRE  127 (182)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             378999999999999999999999875

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*

Probab=99.87  E-value=2.2e-21  Score=133.04  Aligned_cols=105  Identities=22%  Similarity=0.156  Sum_probs=98.5

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .++++++.||++++.|+.+++.|+.++.+|+  +.++++++.||+.+|.+|++||++|++|++.+||.|.+..+++|.. 
T Consensus         3 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-   79 (158)
T 2y3q_A            3 GDTKVINYLNKLLGNELVAINQYFLHARMFK--NWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNI-   79 (158)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC-
Confidence            4788999999999999999999999999999  7899999999999999999999999999999999999998888854 


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      . .++.++++.+++.|+.++..++++++.
T Consensus        80 ~-~~~~e~l~~~l~~E~~~~~~y~~~~~~  107 (158)
T 2y3q_A           80 G-EDVEEMLRSDLALELDGAKNLREAIGY  107 (158)
T ss_dssp             C-SSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3 789999999999999999999998864

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*

Probab=99.87  E-value=2.6e-21  Score=135.16  Aligned_cols=104  Identities=19%  Similarity=0.118  Sum_probs=98.6

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .++++++.||.+++.|+.++++|+.++.+|+  +++++++++||+.+|.+|++||++|++|++.+||.|.++.+++|.  
T Consensus         5 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~~~~--   80 (174)
T 3qb9_A            5 GDPDVLRLLNEQLTSELTAINQYFLHSKMQD--NWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLR--   80 (174)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCC--
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCCCCC--
Confidence            4678999999999999999999999999999  789999999999999999999999999999999999999998885  


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      .|.++.++++.+++.|+.++..++++.+
T Consensus        81 ~~~~~~e~l~~al~~E~~~~~~y~~l~~  108 (174)
T 3qb9_A           81 IGQTLREQFEADLAIEYDVLNRLKPGIV  108 (174)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4789999999999999999999999885

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*

Probab=99.87  E-value=2e-21  Score=136.40  Aligned_cols=109  Identities=17%  Similarity=0.177  Sum_probs=102.0

Q ss_pred             cccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC
Q psy12315          5 QVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVK   84 (120)
Q Consensus         5 ~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~   84 (120)
                      .+|++.++++++.||.+++.|+.+++.|+.++.+|+  +++++++++||+.++.+|++||++|++|+..+||.|.++.+.
T Consensus         3 ~~~~~~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~   80 (179)
T 1nfv_A            3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLD--DMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEG   80 (179)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSS
T ss_pred             cccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCC
Confidence            468999999999999999999999999999999999  679999999999999999999999999999999999999888


Q ss_pred             CCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         85 APARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        85 ~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      .|.. . .++.++|+.+++.|+.++..++++.+
T Consensus        81 ~~~~-~-~~~~e~l~~al~~E~~~~~~y~~l~~  111 (179)
T 1nfv_A           81 KVVT-G-QAVPVIYESDADQEDATIEAYSQFLK  111 (179)
T ss_dssp             CCCC-S-CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7754 2 68999999999999999999999876

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1

Probab=99.86  E-value=1e-20  Score=130.05  Aligned_cols=104  Identities=21%  Similarity=0.102  Sum_probs=97.5

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQE   90 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~   90 (120)
                      ++++++.||++++.|+.+++.|+.++.+|+  +.++++++.||+.++.+|++||++|++|++.+||.|.+..+++|.. .
T Consensus         4 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~   80 (161)
T 1jgc_A            4 DAKVIEFLNAALRSELTAISQYWVHFRLQE--DWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRI-G   80 (161)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-C
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC-C
Confidence            678999999999999999999999999999  7899999999999999999999999999999999999998887754 3


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                       .++.++|+.+++.|+.++..++++++.
T Consensus        81 -~~~~e~l~~~l~~E~~~~~~~~~~~~~  107 (161)
T 1jgc_A           81 -EGPRETLECDLAGEHDALKLYREARDY  107 (161)
T ss_dssp             -SSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             689999999999999999999998764

>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}

Probab=99.85  E-value=1.5e-20  Score=130.41  Aligned_cols=107  Identities=12%  Similarity=0.087  Sum_probs=96.9

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc---cCC
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD---VKA   85 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~---i~~   85 (120)
                      +.++++++.||++++.|+.+++.|+.++.+|+  +.++++++.||..+|.+|++||++|++|++.+||.|.++.   ++.
T Consensus        13 m~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Had~lae~i~~lGg~p~~~~~~~~~~   90 (170)
T 2vzb_A           13 LDVKSLIDQLNAALSEEWLAYYQYWVGALVVE--GAMRADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFEL   90 (170)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHh
Confidence            56789999999999999999999999999999  7899999999999999999999999999999999999877   554


Q ss_pred             C-----CcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         86 P-----ARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        86 p-----~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      +     ....|+ +.++++.++++|+.++..++++++.
T Consensus        91 ~~~~~~~~~~~~-~~e~l~~~l~~E~~~~~~~~~~~~~  127 (170)
T 2vzb_A           91 ARCKYDSPTAFD-SVSLLNQNVSSERCAILRYQEIANF  127 (170)
T ss_dssp             CSSCCCCCCSCB-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1     122464 9999999999999999999998864

>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1

Probab=99.85  E-value=1e-20  Score=129.36  Aligned_cols=96  Identities=21%  Similarity=0.259  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccCCCCcCc
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK--RGGTLKLVDVKAPARQE   90 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~--rGg~v~~~~i~~p~~~~   90 (120)
                      ++++.||++++.|++|+++|++||.||+  ++|++|+++||+.+|.+|+.||.++++|+++  +|+ |   +++.|    
T Consensus         8 ~~~~~Ln~a~~~E~~A~~~Y~~~A~~a~--~~g~~~~a~~f~~~A~eE~~HA~~~~~~l~~~~lg~-p---~~~~p----   77 (144)
T 1j30_A            8 KTAENLKQGFIGESMANRRYLYFAKRAD--EEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTD-P---ATDKP----   77 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC-T---TTSCB----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-C---CcCCC----
Confidence            5999999999999999999999999999  7799999999999999999999999999999  855 4   34444    


Q ss_pred             cCCHHHHHHHHHHHHHHH-HHHHHHHHHh
Q psy12315         91 WGTTEEAFSHALQLEKDV-NQVIIYFFTS  118 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v-~~~l~~l~~~  118 (120)
                      |+++.++|+.++++|+.+ +..|.++.+.
T Consensus        78 ~~~~~e~L~~al~~E~~~~~~~y~~~~~~  106 (144)
T 1j30_A           78 IGTLEQMIESAIAGETYEWTQMYPGFAKV  106 (144)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             CccHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            689999999999999999 8998887653

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*

Probab=99.85  E-value=2.6e-20  Score=126.95  Aligned_cols=105  Identities=23%  Similarity=0.145  Sum_probs=97.5

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .++++++.||++++.|+.+++.|+.++.+++  +.++++++.||+.++.+|++||++|++|++.+||.|.+..+.+|.. 
T Consensus         3 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-   79 (155)
T 2fkz_A            3 GDKIVIQHLNKILGNELIAINQYFLHARMYE--DWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLI-   79 (155)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCC-
Confidence            3678999999999999999999999999999  7899999999999999999999999999999999999988777743 


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                       ..++.++++.+++.|+.++..++++++.
T Consensus        80 -~~~~~e~l~~~l~~E~~~~~~~~~~~~~  107 (155)
T 2fkz_A           80 -GEHTKEMLECDLKLEQAGLPDLKAAIAY  107 (155)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             4689999999999999999999998864

>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}

Probab=99.84  E-value=7.2e-20  Score=126.66  Aligned_cols=104  Identities=8%  Similarity=-0.051  Sum_probs=97.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-------
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD-------   82 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~-------   82 (120)
                      -++++.+.||++++.|+.++++|+.++.|++  ++++.|++.||+.++.+|++||+++++||+.+||.|..+.       
T Consensus         7 ~~~~v~~~LN~~La~e~~~~~~y~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~~~s   84 (158)
T 2c41_A            7 LKEQVLTTLKREQANAVVMYLNYKKYHWLTY--GPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVA   84 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhheE--CcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHC
Confidence            3578999999999999999999999999999  8899999999999999999999999999999999999884       


Q ss_pred             -cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 -VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 -i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       |+.|.  .+.++.++|+.++++|+.++..++++.+
T Consensus        85 ~i~~~~--~~~~~~e~l~~~l~~e~~~~~~~~~~i~  118 (158)
T 2c41_A           85 TVTPSS--GQLTVKQMIEEAIANHELIITEMHQDAE  118 (158)
T ss_dssp             CSCCCC--SCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             67774  3789999999999999999999999875

>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}

Probab=99.84  E-value=7.2e-20  Score=124.03  Aligned_cols=104  Identities=18%  Similarity=0.077  Sum_probs=96.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .++++++.||.+++.|+.++++|+.++.+++  +.+++++++||..++.+|++|+++|++|+..+||.|.+ .+.++.  
T Consensus         7 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~-~~~~~~--   81 (149)
T 2qqy_A            7 DVKELIEGLNEDLAGEYSAIIMYNHNAATVS--GIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTT-IPLRVK--   81 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCCCCC--
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC-CCCCCC--
Confidence            4678999999999999999999999999999  78999999999999999999999999999999999998 665542  


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .|.++.++++.+++.|+.++..++++.+.
T Consensus        82 ~~~~~~e~l~~~l~~E~~~~~~~~~~~~~  110 (149)
T 2qqy_A           82 QAEDVREMLEYARQSEYETIKRYEKRKEQ  110 (149)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999998764

>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1

Probab=99.83  E-value=1.7e-19  Score=122.15  Aligned_cols=100  Identities=13%  Similarity=0.021  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc-ccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--------cC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAH-FDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD--------VK   84 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~-f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~--------i~   84 (120)
                      +++.||++++.|+ ++++|+.++.| ++  +.+++|++.||+.++.||++||+++++||+.+||.|....        |+
T Consensus         2 ~~~~Ln~~la~e~-~~~~~~~~~hw~v~--g~~f~~l~~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~   78 (142)
T 1ji5_A            2 VIEVLNKQVADWS-VLFTKLHNFHWYVK--GPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQ   78 (142)
T ss_dssp             HHHHHHHHHHHHH-HHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHH-HHHHHHHhhhhccc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCCCC
Confidence            6789999999999 99999999999 56  7899999999999999999999999999999999999866        88


Q ss_pred             CCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         85 APARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        85 ~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .|.. .| ++.++|+.+++.|+.++..++++.+.
T Consensus        79 ~~~~-~~-~~~e~l~~~l~~e~~~~~~~~~~~~~  110 (142)
T 1ji5_A           79 EAAY-GE-TAEGMVEAIMKDYEMMLVELKKGMEI  110 (142)
T ss_dssp             CCCT-TC-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8754 57 89999999999999999999998763

>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}

Probab=99.81  E-value=7.6e-19  Score=125.18  Aligned_cols=105  Identities=16%  Similarity=0.113  Sum_probs=97.7

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------   81 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------   81 (120)
                      -++++++.||++++.|+.++++|+.++.+++  +.++++++.||..++.+|++||++|++||+.+||.|...        
T Consensus        25 ~~~~vi~~LN~~La~e~~a~~~y~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~~~~s  102 (192)
T 2vxx_A           25 TTTPICEGMNRLLASFQALYLQYQKHHFVVE--GAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAALC  102 (192)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHC
Confidence            3568999999999999999999999999999  889999999999999999999999999999999999987        


Q ss_pred             ccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         82 DVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        82 ~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      .|+.|.. .|.++.++|+.+++.|+.++..++++.+
T Consensus       103 ~i~e~~~-~~~~~~e~l~~~l~~e~~~i~~~~~~i~  137 (192)
T 2vxx_A          103 CFTPEPE-GAFNCRQMLSNDLQAEQAIIGVLRQQAT  137 (192)
T ss_dssp             SSCCCCS-SBCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7877633 5889999999999999999999999875

>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1

Probab=99.80  E-value=1.5e-18  Score=118.72  Aligned_cols=107  Identities=12%  Similarity=0.053  Sum_probs=97.1

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc-----
Q psy12315          7 RQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV-----   81 (120)
Q Consensus         7 ~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~-----   81 (120)
                      +.+.++++.+.||++++.|+.+...|..++.++.  +.++.|++.||..++.+|++||+++++||+.+||.|..+     
T Consensus         2 ~~~~~~~v~~~LN~~la~e~~~~~~~~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~   79 (149)
T 1n1q_A            2 KTSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVN--GPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASL   79 (149)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHhccchhee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Confidence            3567889999999999999888888888888888  889999999999999999999999999999999999987     


Q ss_pred             ---ccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         82 ---DVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        82 ---~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                         .|+.|.. .+ ++.++|+.++++|+.++..++++.+
T Consensus        80 ~~s~i~~~~~-~~-~~~e~l~~~l~~e~~~~~~~~~~i~  116 (149)
T 1n1q_A           80 EEASIKEATG-GE-SAAEMVSSVVNDFVDLVGELKVARD  116 (149)
T ss_dssp             HHCCSCCCCS-CC-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHCCCCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               4777744 57 8999999999999999999999875

>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1

Probab=99.79  E-value=3.5e-18  Score=116.40  Aligned_cols=103  Identities=12%  Similarity=-0.021  Sum_probs=94.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------c
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------D   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~   82 (120)
                      .+++.+.||++++.|+.+...|..++.+++  ++++.|++.||..++.+|++||+++++||+.+||.|..+        .
T Consensus         3 ~~~v~~~LN~~la~~~~~~~~~~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~   80 (146)
T 1jig_A            3 KTNVVEVLNKQVANWNVLYVKLHNYHWYVT--GPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSS   80 (146)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhccc--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCc
Confidence            467899999999999999999999888888  889999999999999999999999999999999999987        4


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.|.. .+ ++.++|+.++++|+.++..++++.+
T Consensus        81 i~~~~~-~~-~~~e~l~~~l~~e~~~~~~~~~~i~  113 (146)
T 1jig_A           81 VNEGTS-KE-SAEEMVQTLVNDYSALIQELKEGME  113 (146)
T ss_dssp             SCCCCS-CC-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777744 57 8999999999999999999999875

>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}

Probab=99.79  E-value=3.8e-18  Score=117.90  Aligned_cols=103  Identities=14%  Similarity=0.087  Sum_probs=95.5

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------c
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------D   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~   82 (120)
                      ++++++.||++++.|+.+...|..+..+++  ++++.|++.||..++.+|++||+++++||+.+||.|..+        .
T Consensus         5 ~~~v~~~LN~~La~e~~~~~~~~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~iaERI~~lGg~p~~~~~~~~~~s~   82 (156)
T 2d5k_A            5 QQDVVKELNQQVANWTVAYTKLHNFHWYVK--GPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSI   82 (156)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhheeeeE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
Confidence            678999999999999999999999998888  889999999999999999999999999999999999987        4


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.|.. .| ++.++|+.+++.|+.++..++++.+
T Consensus        83 i~~~~~-~~-~~~e~l~~~l~~e~~~~~~~~~~i~  115 (156)
T 2d5k_A           83 VKEAAK-GY-SAEQMVEELSQDFTNISKQLENAIE  115 (156)
T ss_dssp             SCCCCS-CC-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777744 56 8999999999999999999999875

>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}

Probab=99.78  E-value=3.6e-18  Score=121.63  Aligned_cols=105  Identities=17%  Similarity=0.197  Sum_probs=96.7

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------cc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL--------VD   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~--------~~   82 (120)
                      ++++++.||++++.|+.+++.|..++.++.  ++++.+++.||..++.+|++||+++++||+.+||.|..        ..
T Consensus        23 ~~~v~~~LN~~La~e~~~~~~y~~~hw~v~--G~~f~~lh~~f~~~~~ee~~haD~iaERI~~LGg~p~~~~~~~~~~s~  100 (188)
T 2clb_A           23 IKKLVDKLVKATAAEFTTYYYYTILRMHLT--GMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADISA  100 (188)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--HHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhcc
Confidence            678999999999999999999999999999  88999999999999999999999999999999999994        47


Q ss_pred             cC-C-CCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         83 VK-A-PARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        83 i~-~-p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |+ . |.. +|.++.++|+.++++|+.++..++++.+.
T Consensus       101 I~~e~~~~-~~~~~~e~l~~~l~~e~~v~~~~~~~i~~  137 (188)
T 2clb_A          101 CSDAYLPE-NWKDPKEILKVLLEAEQCAIRTWKEVCDM  137 (188)
T ss_dssp             SCCCCCCT-TTTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88 6 533 68899999999999999999999998763

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=99.67  E-value=7.7e-16  Score=110.89  Aligned_cols=100  Identities=13%  Similarity=0.048  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCccCC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGT   93 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~~~   93 (120)
                      +.+.||.+++-|.++++.|+.+|.+++  ..|+++++++|+..|.+|+.||.++++++..+||.|.+ .+. |. ..+++
T Consensus        29 T~~nL~~a~~gE~~a~~~Y~~~A~~A~--~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~i-~~~-p~-~~~gs  103 (202)
T 1yuz_A           29 TLENLKAAIAGETGAHAKYTAFAKAAR--EQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEK-PTV-AA-PSAYS  103 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC-CCC----CCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-ccC-Cc-cCCCC
Confidence            789999999999999999999999999  55999999999999999999999999999999999999 887 52 35889


Q ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHh
Q psy12315         94 TEEAFSHALQLE-KDVNQVIIYFFTS  118 (120)
Q Consensus        94 ~~~~l~~aL~~E-k~v~~~l~~l~~~  118 (120)
                      ..+.|+.++++| .+++..+.++.+.
T Consensus       104 t~enL~~a~~gE~~E~t~my~~~a~~  129 (202)
T 1yuz_A          104 CDLNLISGANGEIYETSDMYPAFIRK  129 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            999999999999 9999988877653

>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A

Probab=99.64  E-value=9.1e-15  Score=103.38  Aligned_cols=104  Identities=9%  Similarity=0.097  Sum_probs=90.7

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------cc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL--------VD   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~--------~~   82 (120)
                      .+++++.||+++..++.+...|..++.++.  ++++.+++.+|..++.++++||+++++||..+||.|..        ..
T Consensus        27 ~~~vi~~LN~~La~~~~~~~~~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~~~~s~  104 (182)
T 1tjo_A           27 AEQCVDALNADLANVYVLYHQLKKHHWNVE--GAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEAS  104 (182)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhCC
Confidence            357899999999777777766666655567  88999999999999999999999999999999999998        67


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.|.. .+.++.++++..++.|+.++..++++.+
T Consensus       105 i~e~~~-~~~~~~e~l~~~l~~e~~~i~~~r~~i~  138 (182)
T 1tjo_A          105 VDVEDE-DVYDIRTSLANDMAIYGDIIEATREHTE  138 (182)
T ss_dssp             SCCCCS-SBCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777633 5779999999999999999999999875

>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*

Probab=99.35  E-value=4.5e-11  Score=82.80  Aligned_cols=104  Identities=10%  Similarity=0.076  Sum_probs=92.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------c
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------D   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~   82 (120)
                      .+++.+.||+.+..|+.+..+|..++-+..  ++++..+..+|..++.++++|+..++++|...||.|..+        .
T Consensus        15 ~~~vi~~Ln~~La~~~~l~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~   92 (162)
T 1o9r_A           15 KSTVIGILNESLASVIDLALVTKQAHWNLK--GPQFIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSSTTK   92 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCC
Confidence            457899999999999999999999999999  889999999999999999999999999999999999876        4


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.... .+.++.++++..++.|+.+...++++.+
T Consensus        93 i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~  126 (162)
T 1o9r_A           93 LKAYPT-DIYKIHDHLDALIERYGEVANMIRKAID  126 (162)
T ss_dssp             SCCCCS-SCCBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            554322 3447999999999999999999998765

>2bk6_A Non-heme iron-containing ferritin; DPS (DNA binding protein from starved cells), ferroxidase center, mutagenesis study; 2.19A {Listeria innocua} SCOP: a.25.1.1 PDB: 1qgh_A 2bjy_A 2iy4_A 2bkc_A

Probab=99.35  E-value=2.9e-11  Score=83.33  Aligned_cols=103  Identities=11%  Similarity=-0.006  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------cc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------DV   83 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~i   83 (120)
                      +++.+.||+.+..|+.+..+|..++-++.  ++++..+..+|.+++.++++|+..++++|...||.|...        .+
T Consensus         7 ~~vi~~Ln~~La~~~~~~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~~D~lAERI~~Lgg~P~~~~~~~~~~s~l   84 (156)
T 2bk6_A            7 VDTKEFLNHQVANLNVFTVKIHQIGWYMR--GHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASV   84 (156)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccchheE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCC
Confidence            46899999999999999999999999999  899999999999999999999999999999999999874        25


Q ss_pred             CCCCcCccC-CHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         84 KAPARQEWG-TTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        84 ~~p~~~~~~-~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      +.... .+. ++.++++..++.|+.+...+++..+
T Consensus        85 ~e~~~-~~~~~~~eml~~~l~~~~~~i~~~r~~i~  118 (156)
T 2bk6_A           85 EEAPY-TKPKTMDQLMEDLVGTLELLRDEYKQGIE  118 (156)
T ss_dssp             CCCCC-CSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            54422 333 7999999999999999999998764

>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1

Probab=99.35  E-value=3.1e-11  Score=83.20  Aligned_cols=104  Identities=8%  Similarity=-0.050  Sum_probs=92.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------c
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------D   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~   82 (120)
                      ++++++.||+.+..|+.+.++|..++-++.  ++++..+..+|.+++.++++|+..++++|...||.|...        .
T Consensus        11 ~~~vi~~Ln~~La~~~~~~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~   88 (156)
T 2fjc_A           11 IAAICEQLRQHVADLGVLYIKLHNYHWHIY--GIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSG   88 (156)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhhCC
Confidence            578999999999999999999999999999  899999999999999999999999999999999999873        2


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.+.. .+.++.++++..++.|+.+...++++.+
T Consensus        89 i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~  122 (156)
T 2fjc_A           89 IAEETE-KEITIVSALARVKRDFEYLSTRFSQTQV  122 (156)
T ss_dssp             SCCCCC-CSEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            443322 3457999999999999999999998764

>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}

Probab=99.34  E-value=5.8e-11  Score=81.59  Aligned_cols=103  Identities=12%  Similarity=0.082  Sum_probs=91.3

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------c
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------D   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~   82 (120)
                      .+++.+.||+.+..|+.+..+|..++-++.  ++++..+..+|.+++.++++|+..++++|...||.|...        .
T Consensus        10 ~~~vi~~Ln~~La~~~~~~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~~D~lAERI~~LGg~P~~~~~~~~~~s~   87 (153)
T 2chp_A           10 QTLVENSLNTQLSNWFLLYSKLHRFHWYVK--GPHFFTLHEKFEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEHAS   87 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCC
Confidence            357899999999999999999998888888  899999999999999999999999999999999999874        2


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.+.. .+ ++.++++..++.|+.+...+++..+
T Consensus        88 i~e~~~-~~-~~~eml~~~l~~~~~~i~~~r~~i~  120 (153)
T 2chp_A           88 ITDGGN-ET-SASEMVQALVNDYKQISSESKFVIG  120 (153)
T ss_dssp             SCSCCC-CC-SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344322 34 8999999999999999999998764

>2z90_A Starvation-inducible DNA-binding protein or FINE tangled PILI major subunit; quarternary assembly, ferroxidation; 2.40A {Mycobacterium smegmatis str}

Probab=99.33  E-value=6.8e-11  Score=82.00  Aligned_cols=104  Identities=7%  Similarity=-0.102  Sum_probs=92.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------c
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------D   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~   82 (120)
                      ++++.+.||+.+..|+.++..|....-+..  +.++..+..+|.+++.++++|+..++++|...||.|...        .
T Consensus        16 ~~~vi~~Ln~~La~~~~l~~~~~~~hW~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~   93 (161)
T 2z90_A           16 TPEFGGNLQKVLVDLIELSLQGKQAHWNVV--GSNFRDLHLQLDELVDFAREGSDTIAERMRALDAVPDGRSDTVAATTT   93 (161)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCC
Confidence            678999999999999999999987777777  889999999999999999999999999999999999874        4


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.+.. .+.++.++++..++.|+.+...+++..+
T Consensus        94 i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~  127 (161)
T 2z90_A           94 LPEFPA-FERSTADVVDLITTRINATVDTIRRVHD  127 (161)
T ss_dssp             SCCCCS-SCEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            554322 3567999999999999999999998764

>2yjk_A AFP, DPS; metal-binding protein, iron uptake, ferritin fold; 2.00A {Microbacterium arborescens} PDB: 2yjj_A

Probab=99.32  E-value=4.4e-11  Score=82.92  Aligned_cols=103  Identities=5%  Similarity=-0.090  Sum_probs=91.3

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-------c
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD-------V   83 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~-------i   83 (120)
                      .+++.+.||+.+..|+.+..+|..++-++.  ++++..+..+|.+++.++++|+..++++|...||.|....       |
T Consensus        18 ~~~vi~~Ln~~La~~~~l~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~si   95 (161)
T 2yjk_A           18 AAAAAQFLTPVVHKMQALVVNGKQAHWNVR--GSNFIAIHELLDSVVAHAQDYADTAAERIVALGLPIDSRVSTMAEKTS   95 (161)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhheeeE--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhcc
Confidence            457899999999999999999998888888  8999999999999999999999999999999999998744       5


Q ss_pred             CCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         84 KAPARQEWGTTEEAFSHALQLEKDVNQVIIYFF  116 (120)
Q Consensus        84 ~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~  116 (120)
                      +.+.. .+.++.++++..++.|+.+...+++..
T Consensus        96 ~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i  127 (161)
T 2yjk_A           96 TAVPA-GFAQWQDEIKAIVSDIDAALVDLQAAI  127 (161)
T ss_dssp             CCSCS-SCEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            54422 233799999999999999999998865

>3ak8_A DNA protection during starvation protein; DPS-like protein, dodecamer, iron-binding protein, metal BIN protein, oxidoreductase; HET: DNA; 1.25A {Salmonella enterica subsp} PDB: 3ak9_A* 1f33_A* 1f30_A* 1dps_A 1jts_A* 1jre_A* 1l8h_A* 1l8i_A* 4dyu_A*

Probab=99.31  E-value=1.1e-10  Score=81.27  Aligned_cols=104  Identities=10%  Similarity=0.034  Sum_probs=91.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------c
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------D   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~   82 (120)
                      .+++.+.||+.+..|+.+...|....-+..  ++++..+..+|.+++.++++|+..++++|...||.|...        .
T Consensus        26 ~~~vi~~Ln~~LA~~~~l~~k~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~s~  103 (167)
T 3ak8_A           26 KKATVELLNRQVIQFIDLSLITKQAHWNMR--GANFIAVHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTP  103 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhheeE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCC
Confidence            357899999999999999999988777776  899999999999999999999999999999999999874        5


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.... .+.++.++++..++.|+.+...+++..+
T Consensus       104 i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~  137 (167)
T 3ak8_A          104 LKSYPL-DIHNVQDHLKELADRYAVVANDVRKAIG  137 (167)
T ss_dssp             SCCCCS-SCCBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            554322 4568999999999999999999998765

>2yw6_A DNA protection during starvation protein; DNA-binding protein, quarternary assembly, ferroxidation, oxidoreductase; HET: DNA; 2.53A {Mycobacterium smegmatis} SCOP: a.25.1.1 PDB: 1vei_A 1vel_A 1veq_A 1uvh_A* 2yw7_A

Probab=99.29  E-value=9.9e-11  Score=82.80  Aligned_cols=105  Identities=9%  Similarity=-0.029  Sum_probs=93.3

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------   81 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------   81 (120)
                      -.+++++.||+.+..|+.+..+|..++-++.  ++++..+..+|.+++.++++|+..++++|...||.|...        
T Consensus        13 ~~~~vi~~LN~~LA~~~~l~~q~~~~hW~v~--G~~F~~lh~~~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s   90 (183)
T 2yw6_A           13 KASDVADLLQKQLSTYNDLHLTLKHVHWNVV--GPNFIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDR   90 (183)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHC
Confidence            4568999999999999999999999888888  899999999999999999999999999999999999873        


Q ss_pred             ccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         82 DVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        82 ~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      .|+.+.. .+.++.++++..++.|+.+...++++.+
T Consensus        91 ~i~e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~  125 (183)
T 2yw6_A           91 TWDDYSV-ERDTVQAHLAALDLVYNGVIEDTRKSIE  125 (183)
T ss_dssp             CSCCCCC-CSEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4554322 3457999999999999999999998765

>2c2u_A DPS, DNA-binding stress response protein; DNA-binding protein, iron; 1.1A {Deinococcus radiodurans} PDB: 2c2f_A 2f7n_A

Probab=99.28  E-value=1.2e-10  Score=83.91  Aligned_cols=104  Identities=9%  Similarity=0.011  Sum_probs=91.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------c
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------D   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~   82 (120)
                      .+++++.||+.+..|+.+.++|..++-++.  ++++..+..+|..++.++++|+..++++|...||.|...        .
T Consensus        58 ~~~vi~~LN~~LAde~~l~~qy~~~HWnv~--G~~F~~LHe~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~  135 (207)
T 2c2u_A           58 FQTVAETLQRNLATTISLYLKFKKYHWDIR--GRFFRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYST  135 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTBCCCCSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCC
Confidence            347899999999999999999998888888  899999999999999999999999999999999999874        2


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+... ..+.++.++++..++.|..+...++++.+
T Consensus       136 I~e~~-~g~~~~~emL~~ll~~e~~~i~~~re~i~  169 (207)
T 2c2u_A          136 VQVPQ-ETVRDARTQVADLVQDLSRVGKGYRDDSQ  169 (207)
T ss_dssp             SCCCS-SCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44432 23458999999999999999999998764

>2c2j_A DNA-binding stress response protein; DNA-binding protein, DPS; 2.05A {Deinococcus radiodurans} PDB: 2c6r_A

Probab=99.26  E-value=1.5e-10  Score=83.66  Aligned_cols=104  Identities=6%  Similarity=-0.075  Sum_probs=92.2

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------c
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------D   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~   82 (120)
                      .+++++.||+.+..|+.+..+|..++-++.  ++++..+..+|.+++.++++|+..++++|...||.|...        .
T Consensus        45 ~~~vi~~LN~~LAde~~l~~q~~~~HWnv~--G~~F~~LHe~fee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~  122 (211)
T 2c2j_A           45 LKKSVQALQNTLTELQALQLQTKQAHWNVS--GTLWYTLHELLQDHYEGISKFADDVAERQLSVGASSDGRAITIVAASR  122 (211)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCC
Confidence            367899999999999999999999888888  899999999999999999999999999999999999873        4


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.... .+.++.++++..++.|+.+...++++.+
T Consensus       123 i~e~~~-g~~~~~emL~~ll~~e~~~i~~~re~i~  156 (211)
T 2c2j_A          123 LPEIPG-GFLDDAQVIQFFTYQYETVGQRIHQRVG  156 (211)
T ss_dssp             SCCCCC-SCEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            454322 3457999999999999999999998765

>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A

Probab=99.25  E-value=4.1e-10  Score=79.05  Aligned_cols=107  Identities=7%  Similarity=0.030  Sum_probs=92.2

Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc------
Q psy12315          8 QNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV------   81 (120)
Q Consensus         8 ~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~------   81 (120)
                      ..-.+++.+.||+.+..++.++..|....-+..  +.++..+..+|.+++.++++|+..++++|...||.|...      
T Consensus        22 ~~~~~~vi~~LN~~LA~~~~l~~k~~~~HWnv~--G~~f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~   99 (175)
T 2wlu_A           22 ASKNEKTKAVLNQAVADLSVAASIVHQVHWYMR--GPGFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSK   99 (175)
T ss_dssp             -CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHH
Confidence            345678999999999999999999987777777  889999999999999999999999999999999999874      


Q ss_pred             --ccCCCCcCccC-CHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         82 --DVKAPARQEWG-TTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        82 --~i~~p~~~~~~-~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                        .|+.... .+. ++.++++..++.|+.+...+++..+
T Consensus       100 ~s~i~e~~~-~~~~~~~eml~~~l~~~~~~i~~~r~~i~  137 (175)
T 2wlu_A          100 HSKLDEAKG-TYDKTVAQHLARLVEVYLYLSSLYQVGLD  137 (175)
T ss_dssp             HCSCCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              4444322 333 8999999999999999999998764

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=99.24  E-value=1.4e-10  Score=81.41  Aligned_cols=86  Identities=21%  Similarity=0.245  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCcc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEW   91 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~   91 (120)
                      .+.++.|++.+.-|.+|.+.|+.+|.+++  +.|++.+|++|+..|.+|+.||.++++++   ||              .
T Consensus         5 ~~T~~nL~~afagEs~A~~~Y~~~A~~A~--~eG~~~iA~~F~~~A~~E~~HA~~~~~~L---~~--------------i   65 (170)
T 3pwf_A            5 TMTKKFLEEAFAGESMAHMRYLIFAEKAE--QEGFPNIAKLFRAIAYAEFVHAKNHFIAL---GK--------------L   65 (170)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHT---TC--------------C
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHHHHHHH---cC--------------C
Confidence            56789999999999999999999999999  66999999999999999999999999995   43              2


Q ss_pred             CCHHHHHHHHHHHHHHH-HHHHHHHH
Q psy12315         92 GTTEEAFSHALQLEKDV-NQVIIYFF  116 (120)
Q Consensus        92 ~~~~~~l~~aL~~Ek~v-~~~l~~l~  116 (120)
                      ++..+.|+.+++.|... ++.+.++.
T Consensus        66 ~~t~enL~~a~~gE~~e~~~mY~~~a   91 (170)
T 3pwf_A           66 GKTPENLQMGIEGETFEVEEMYPVYN   91 (170)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             CChHHHHHHHHHhHHHHHHHHHHHHH
Confidence            45678888899888874 55554443

>2cf7_A DPR; peroxide resistance, DPS-family, ferritin-like, ferroxidase, iron-binding; HET: EPE; 1.50A {Streptococcus suis} PDB: 2ux1_A* 2bw1_A* 1umn_A* 2v15_A* 2xjm_A* 2xjn_A* 2xjo_A* 2xkq_A*

Probab=99.23  E-value=3.7e-10  Score=78.57  Aligned_cols=106  Identities=11%  Similarity=0.035  Sum_probs=90.0

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc-------
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV-------   81 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~-------   81 (120)
                      +-++++.+.||+.+..++.++.+|....-+..  +.++..+..+|..++.++++|+..++++|...||.|...       
T Consensus        13 ~~~~~vi~~LN~~La~~~~l~~~~~~~hW~v~--G~~f~~lh~~~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~   90 (165)
T 2cf7_A           13 PSLADSKAVLNQAVADLSVAHSILHQVHWYMR--GRGFMIWHPKMDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSEN   90 (165)
T ss_dssp             C---CHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Confidence            44567999999999999999999988777777  889999999999999999999999999999999999874       


Q ss_pred             -ccCCCCcCcc-CCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         82 -DVKAPARQEW-GTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        82 -~i~~p~~~~~-~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       .|+.. ...+ .++.++++..++.|+.+...+++..+
T Consensus        91 s~i~e~-~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~  127 (165)
T 2cf7_A           91 SQLKEV-LGDYNVTIEEQLARVVEVFRYLAALFQKGFD  127 (165)
T ss_dssp             CSCCCC-CCCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             34433 2234 58999999999999999999988764

>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}

Probab=99.23  E-value=5.4e-10  Score=80.12  Aligned_cols=106  Identities=8%  Similarity=0.031  Sum_probs=91.9

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc-------
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV-------   81 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~-------   81 (120)
                      .-.+++.+.||+.+..|+.++..|....-+..  +.++..+..+|.+++.++++||..++++|...||.|...       
T Consensus        39 ~~~~~vi~~LN~~LAde~~l~~k~~~~HWnV~--G~~F~~LH~~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~  116 (199)
T 2xgw_A           39 SKNEKTKAVLNQAVADLSVAASIVHQVHWYMR--GPGFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKH  116 (199)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Confidence            34568999999999999999999987777777  889999999999999999999999999999999999874       


Q ss_pred             -ccCCCCcCccC-CHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         82 -DVKAPARQEWG-TTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        82 -~i~~p~~~~~~-~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       .|+.... .+. ++.++++..++.|+.+...+++..+
T Consensus       117 s~i~e~~~-g~~~~~~emL~~ll~~e~~~i~~~re~i~  153 (199)
T 2xgw_A          117 SKLDEAKG-TYDKTVAQHLARLVEVYLYLSSLYQVGLD  153 (199)
T ss_dssp             CSCCCCCC-CTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             4444322 333 8999999999999999999998764

>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}

Probab=99.19  E-value=4e-10  Score=77.02  Aligned_cols=94  Identities=23%  Similarity=0.320  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCcc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEW   91 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~   91 (120)
                      .++++.|+....-|.++.+.|+.+|..++  ..|+|.++++|+..|.+|+.||.++++++...| .|..   ..    ..
T Consensus        11 ~~t~~nL~~afagEs~A~~~Y~~~A~~A~--~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~~~-~p~~---~~----~~   80 (144)
T 4di0_A           11 SKTEENLKYAFAGESQANRRYLYFASKAD--VEGQNDIAALFRSTAEGETGHAHGHLEYLEAVG-DPAT---GL----PF   80 (144)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CTTT---SC----CC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-Cccc---CC----CC
Confidence            36789999999999999999999999999  559999999999999999999999999987655 3321   11    24


Q ss_pred             CCHHHHHHHHHHHHHHHH-HHHHHH
Q psy12315         92 GTTEEAFSHALQLEKDVN-QVIIYF  115 (120)
Q Consensus        92 ~~~~~~l~~aL~~Ek~v~-~~l~~l  115 (120)
                      ++..+.|+.+++-|.... ..+...
T Consensus        81 ~~T~enL~~A~~GE~~e~~~~Y~~~  105 (144)
T 4di0_A           81 GTSRQNLQSAIAGETHEYTDMYPGM  105 (144)
T ss_dssp             SSHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             CcHHHHHHHHHHhHHHHHHHHHHHH
Confidence            577899999999998884 455443

>3iq1_A DPS family protein; csgid, SAD, niaid, metal transport, STRU genomics, center for structural genomics of infectious DISE; 1.67A {Vibrio cholerae o1 biovar el tor}

Probab=99.11  E-value=4.7e-09  Score=72.40  Aligned_cols=103  Identities=4%  Similarity=-0.104  Sum_probs=89.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------cc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL--------VD   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~--------~~   82 (120)
                      .+++.+.||+.+..++....+|..+.-+..  +.++..+..+|.+++.++++|+..++++|...||.|..        ..
T Consensus        16 ~~~v~~~Ln~~LAd~~~l~~k~~~~HWnv~--G~~F~~lH~~~ee~~~~~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~   93 (159)
T 3iq1_A           16 SQKLANALNNLLANYQVFYMNTRGYHWNIQ--GKEFFELHAKFEEIYTDLQLKIDELAERILTLSARPMHSFSGYLKAAQ   93 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhheeeE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCC
Confidence            357899999999999999999988855555  88999999999999999999999999999999999985        23


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.+ . .+.++.++++..++.+..+...+++..+
T Consensus        94 i~e~-~-~~~~~~eml~~ll~~~~~~i~~~r~~i~  126 (159)
T 3iq1_A           94 IKEH-T-DSIDGRSSMQGLVDGFSILLHQQRDILE  126 (159)
T ss_dssp             SCCC-C-CCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcc-C-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5544 2 4558999999999999999999998765

>3kwo_A Putative bacterioferritin; alpha-helix, bacterial ferritin fold, structural genomics, center for structural genomics of infectious diseases; 1.99A {Campylobacter jejuni} SCOP: a.25.1.0

Probab=99.09  E-value=3.3e-09  Score=72.72  Aligned_cols=102  Identities=10%  Similarity=-0.050  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------cccC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL--------VDVK   84 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~--------~~i~   84 (120)
                      ++.+.||..+..++.....|....-+..  +.++..+..+|..++.++++|+..++++|...||.|..        ..|+
T Consensus         5 ~~~~~Ln~~LAd~~~l~~k~~~~HWnv~--G~~F~~lH~~~ee~~~~~~~~~D~iAERI~~LGg~P~~t~~~~~~~s~i~   82 (152)
T 3kwo_A            5 SVTKQLLQMQADAHHLWVKFHNYHWNVK--GLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSP   82 (152)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHBC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhheeeE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCC
Confidence            5789999999999999999999888888  88999999999999999999999999999999999986        4555


Q ss_pred             CCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         85 APARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        85 ~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      .+.. .+.++.++++..++.+..+...+++..+
T Consensus        83 e~~~-~~~~~~eml~~~l~~~~~~i~~~r~~i~  114 (152)
T 3kwo_A           83 KVAK-DCFTPLEVIELIKQDYEYLLAEFKKLNE  114 (152)
T ss_dssp             CCCC-SCBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5432 3347999999999999999999998765

>4eve_A Neutrophil-activating protein; dodecamer, four-helix bundle, metal transport; 2.10A {Helicobacter pylori} PDB: 4evd_A 3t9j_A 3ta8_A 4evb_A 4evc_A 1ji4_A

Probab=99.08  E-value=3.9e-09  Score=73.39  Aligned_cols=104  Identities=12%  Similarity=0.042  Sum_probs=88.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------cc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL--------VD   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~--------~~   82 (120)
                      .+++.+.||+.+..++....+|....-+..  +.++..+..+|.++++++++|+..++++|...||.|..        ..
T Consensus        20 ~~~v~~~Ln~~LAd~~~l~~k~~~~HWnv~--G~~F~~lH~~~ee~~~e~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~   97 (164)
T 4eve_A           20 HMKTFEILKHLQADAIVLFMKVHNFHWNVK--GTDFFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTR   97 (164)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHcC
Confidence            346899999999999999999988855555  88999999999999999999999999999999999985        34


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.+.. .+-++.++++..++.++.+...+++..+
T Consensus        98 i~e~~~-~~~~~~eml~~ll~~~~~~i~~~r~~i~  131 (164)
T 4eve_A           98 VKEETK-TSFHSKDIFKEILEDYKHLEKEFKELSN  131 (164)
T ss_dssp             SCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            454432 2327999999999999999999998765

>2pyb_A NAPA, neutrophil activating protein; ferritin, DPS, four-helix bundle, metal transport; 2.60A {Borrelia burgdorferi}

Probab=99.07  E-value=1.6e-10  Score=79.24  Aligned_cols=103  Identities=7%  Similarity=-0.109  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--------c
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD--------V   83 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~--------i   83 (120)
                      +++.+.||+.+..|+.++..|....-+..  +.++..+..+|.+++.++++|+..++++|...||.|....        +
T Consensus         4 ~~vi~~Ln~~La~~~~~~~~~~~~hW~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~Lgg~P~~~~~~~~~~s~l   81 (151)
T 2pyb_A            4 DAIQLKLQELLASLHIFYSNLRGIHWNIK--DTNFFVIHKKTQKLYEYIEKIIDIVAERSRMLGYDSEFRYSEFMKKSFI   81 (151)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CSSTHHHHHHHHHHHTTTHHHHHHHHHHHHHHTCCCCCCSTTTTTTCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccccccC--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
Confidence            46899999999999999999988777777  8899999999999999999999999999999999998743        3


Q ss_pred             CCCCcCccC-CHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         84 KAPARQEWG-TTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        84 ~~p~~~~~~-~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      +.+.. .+. ++.++++..++.|+.+...+++..+
T Consensus        82 ~e~~~-~~~~~~~eml~~~l~~~~~~i~~~r~~i~  115 (151)
T 2pyb_A           82 KELDI-ESTSNFLPSMESIVCSLTEILKNIFGMRK  115 (151)
T ss_dssp             CCCCS-CSSSCCCSSCCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33322 222 6778888888888888888887654

>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8

Probab=98.83  E-value=1.1e-07  Score=65.60  Aligned_cols=105  Identities=11%  Similarity=-0.018  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccc------cC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR--GGTLKLVD------VK   84 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r--Gg~v~~~~------i~   84 (120)
                      .+.+.|+..|..|..+..+|..+|..++  .++.+.+++.|...|.+|+.|+..|.++...+  ++.+....      ..
T Consensus         5 ~~~e~L~~Ai~~E~~~~~~Y~~lA~~~~--~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   82 (167)
T 2oh3_A            5 TLAEFLAHAIALETEAAERYVELADMME--AHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEV   82 (167)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccCCCcHhh
Confidence            3788999999999999999999999888  56889999999999999999999999998874  33222221      00


Q ss_pred             CC--CcCccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         85 AP--ARQEWGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        85 ~p--~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                      .+  ......++.++++.|+..|+.....+..+.+.+
T Consensus        83 ~~~~~~~~~~~~~~~l~~A~~~E~~a~~fY~~~a~~~  119 (167)
T 2oh3_A           83 GDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAANS  119 (167)
T ss_dssp             SCC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            01  011234799999999999999999888886643

>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1

Probab=98.75  E-value=2.6e-07  Score=64.10  Aligned_cols=101  Identities=16%  Similarity=0.209  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc---cCC---
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR-GGTLKLVD---VKA---   85 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r-Gg~v~~~~---i~~---   85 (120)
                      .+.+.|+..+..|..+...|..+|..+.  +   +.+++.|...|.+|+.|+..|.+++..+ |+.+.+..   +-.   
T Consensus        20 ~~~e~L~~A~~~E~~a~~~Y~~~A~~~~--~---~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g~~~~~~~~~~~~~~~~   94 (175)
T 2fzf_A           20 SLEELLGMAIKAEIGAREFYKSLAEKIK--I---EALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQ   94 (175)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHSCC--C---TTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCCSCCBSCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhhhh
Confidence            5788999999999999999999999887  3   7899999999999999999999999987 44443221   000   


Q ss_pred             CC---cCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         86 PA---RQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        86 p~---~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |.   .+...+..++++.++..|+.....+..+.+.
T Consensus        95 ~~~~~~~~~~~~~~~L~~ai~~E~~a~~~Y~~~a~~  130 (175)
T 2fzf_A           95 PVARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEM  130 (175)
T ss_dssp             CCCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            10   0112358899999999999999888887764

>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}

Probab=98.39  E-value=1.1e-05  Score=55.02  Aligned_cols=105  Identities=13%  Similarity=0.105  Sum_probs=79.7

Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCC
Q psy12315          8 QNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPA   87 (120)
Q Consensus         8 ~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~   87 (120)
                      +.+.+++++.||+.|..+..+...|-..+.-.+     =|.+..+|...+.+...|+..|-.++...||.|...+--...
T Consensus         6 ~~~~~~~i~~Ln~Li~~~~D~~~gY~~aae~~~-----d~~lk~~f~~~a~~~~~~~~eL~~~i~~lGg~p~~~~s~~g~   80 (153)
T 4etr_A            6 QTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLR-----DPQLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGD   80 (153)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC---------
T ss_pred             HhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcHHHH
Confidence            556789999999999999999999999887665     368999999999999999999999999999999754432221


Q ss_pred             -cCccC---------CHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         88 -RQEWG---------TTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        88 -~~~~~---------~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       ...|.         +...+++.+..-|+.+...+.+..+
T Consensus        81 ~hr~~~~lks~~~~~~~~~iL~~~~~gE~~~~~~Y~~al~  120 (153)
T 4etr_A           81 LHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALE  120 (153)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence             12343         2466899999999999988887754

>4a25_A DPS, ferritin DPS family protein; metal binding protein, detoxification process; 2.00A {Kineococcus radiotolerans}

Probab=98.16  E-value=0.0001  Score=51.11  Aligned_cols=105  Identities=5%  Similarity=-0.056  Sum_probs=85.3

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc-------c
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV-------D   82 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~-------~   82 (120)
                      -++++.+.||..+...+.-...+....-.-.  +.++..+..+|.+++++.++|+..+.++|...||.|.-.       .
T Consensus        21 a~~~i~~~Ln~~LAd~~~Ly~k~k~~HWnV~--G~~F~~lH~~fee~y~e~~~~~D~iAERI~~LGg~P~~~~~~~~~~~   98 (169)
T 4a25_A           21 ASSRLNAGLQEVLVDLTALHLQGKQAHWNIV--GENWRDLHLQLDTLVEAARGFSDDVAERMRAVGGVPDARPQTVAASR   98 (169)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhceeeE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccHHHHHHhc
Confidence            4678999999999998888887776666666  788999999999999999999999999999999998432       1


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      +..+ .+...+..++++..++..+.+...++++..
T Consensus        99 ~~~~-~~~~~~~~~mv~~l~~~~~~~~~~~r~~~~  132 (169)
T 4a25_A           99 IGDV-GPDEIDTRACVEAIVALVRHTVDTIRRVHD  132 (169)
T ss_dssp             SCCC-CSSCEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             Cccc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1111 123446889999999999999998888765

>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1

Probab=98.13  E-value=0.00011  Score=50.01  Aligned_cols=101  Identities=21%  Similarity=0.149  Sum_probs=77.1

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccc----cccCC
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGT-LKL----VDVKA   85 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~-v~~----~~i~~   85 (120)
                      +....+.|...|..|..+...|..+|. ..     -|.+.+.|...|.+|..|...|.+...  |+. |..    ..+..
T Consensus        12 ~~~~~e~L~~Ai~~E~~~~~~Y~~lA~-~~-----~~~~k~lF~~LA~eE~~H~~~l~~l~~--~~~~~~~~~~l~~~~~   83 (157)
T 1vjx_A           12 HMKVSDILTVAIRLEEEGERFYRELSE-HF-----NGEIKKTFLELADQERIHAEIFRKMSD--QENWDEVDSYLAGYAF   83 (157)
T ss_dssp             SCBHHHHHHHHHHHHHHHHHHHHHHTT-SC-----CSHHHHHHHHHHHHHHHHHHHHHHHHH--HSCHHHHTCBCCSBCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHH-cC-----CHHHHHHHHHHHHHHHHHHHHHHHhhc--cCcchhHHHHHHhhhh
Confidence            345678999999999999999999998 54     478999999999999999999999843  222 221    11111


Q ss_pred             CC-cCcc--------CCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         86 PA-RQEW--------GTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        86 p~-~~~~--------~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                      .. .+.|        .+..++++.|+..|+.....+..+.+.+
T Consensus        84 ~~~f~~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~Y~~~a~~~  126 (157)
T 1vjx_A           84 YEVFPDTSEILRRKDLTLKEVLDIAISVEKDSIILYYELKDGL  126 (157)
T ss_dssp             CCCCCCCTTGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhccchhhhhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            10 0122        3589999999999999999998887754

>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A

Probab=98.05  E-value=8.4e-06  Score=57.40  Aligned_cols=99  Identities=19%  Similarity=0.261  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc---------cc
Q psy12315         13 ETEEKINKQINLELYA-SYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL---------VD   82 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~a-s~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~---------~~   82 (120)
                      ...+.|+..+.-|.+. ...|..+|...+.+  |++.+|+.|+..|..|..||.++.+++...++.+.-         ..
T Consensus        24 ~T~eNL~~A~~GE~~E~~~~Y~~fA~~A~~E--G~~~IA~~F~~~A~~E~~HA~r~~kll~~l~~~~~~~~~~~~~~v~~  101 (179)
T 3qhb_A           24 NTDANAASSIEVEMYECDCMYPTFAEIARRS--GQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVST  101 (179)
T ss_dssp             SHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence            3578899999999999 78999999999954  999999999999999999999999999876654310         02


Q ss_pred             cCCCC---cCccCCHHHHHHHHHHHHHHH-HHHHH
Q psy12315         83 VKAPA---RQEWGTTEEAFSHALQLEKDV-NQVII  113 (120)
Q Consensus        83 i~~p~---~~~~~~~~~~l~~aL~~Ek~v-~~~l~  113 (120)
                      ...|.   .+.-.++.++|+.+.+-|..- +.-+-
T Consensus       102 ~~~p~~~~~~T~eN~~~~L~~A~~GE~~E~~~mYp  136 (179)
T 3qhb_A          102 IESQIDAVASDSRGLRRALETALEVETIESQKTYP  136 (179)
T ss_dssp             HHHTHHHHHHSHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccccccccCcHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            22231   012334777899999999864 44333

>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}

Probab=97.91  E-value=0.00031  Score=54.29  Aligned_cols=106  Identities=13%  Similarity=0.028  Sum_probs=83.8

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC
Q psy12315          7 RQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAP   86 (120)
Q Consensus         7 ~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p   86 (120)
                      |..-..++...||..+.-|..+...|..++..-+     -|++-+.|++...+++.|+++|-+|+...||.|..+..-.-
T Consensus       204 ~~~~~~~~v~~ln~a~~ge~~~~~a~e~~a~~~~-----d~~~~~~~~~i~~~~~~h~~~l~~~~~~~g~~~~~~~~~~~  278 (365)
T 3fse_A          204 GGSTKGDIVRGLNTALGGERYSLEALEKYTEKES-----DVEAKALFQEMITNKQRHIEYLETYLTRLGEKPSLSANIAN  278 (365)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSCC---
T ss_pred             cCCchhhhhHHHHHHhhcChhHHHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCcCcchhH
Confidence            3444568899999999999999999999886554     68999999999999999999999999999999996655432


Q ss_pred             Cc---Ccc---CCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         87 AR---QEW---GTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        87 ~~---~~~---~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      ..   ..|   .+..++++.+|..|+.=.....+|.+
T Consensus       279 ~~a~~~~~~~~~~~~~~l~~al~~~~~gi~~~~~l~~  315 (365)
T 3fse_A          279 QYAKVKTALTGSDDIYQIRSALGDIQTGIGDIGNLCA  315 (365)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCChHHHHHHHhcchhhhHHHHHHHHH
Confidence            11   122   46888999999999987777766644

>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A

Probab=97.20  E-value=0.0028  Score=46.98  Aligned_cols=104  Identities=10%  Similarity=0.102  Sum_probs=78.5

Q ss_pred             cHHHHHHHHHHH---HHHHHHHHHHHHHhhcccccCcCchhH-HHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--c--
Q psy12315         11 HAETEEKINKQI---NLELYASYVYLSMSAHFDRDVVALPGI-SKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--D--   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi---~~El~as~~Yl~~a~~f~~~~~~l~g~-a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--~--   82 (120)
                      ++....+|.+|+   .-|+.++.+|+..+.-+.  +   ++. ...+..-+.||+.|++.+..-|.++++...+.  .  
T Consensus        18 dp~~A~~L~e~~GG~~GElsAamqYl~Q~~~~~--~---~~~y~dLL~dIatEEl~HlEmva~~I~~L~~ga~~~~~~a~   92 (266)
T 1o9i_A           18 DPIMARRLQESLGGQWGETTGMMSFLSQGWAST--G---AEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLK   92 (266)
T ss_dssp             CHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHCC--S---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHH
T ss_pred             CHHHHHHHHHHhCCCccHHHHHHHHHHHHhcCC--C---cHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCcchhhcc
Confidence            345556666665   579999999999999998  3   466 88999999999999999999999997643111  0  


Q ss_pred             -----------------c-----CCCCc---Ccc--------CCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         83 -----------------V-----KAPAR---QEW--------GTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        83 -----------------i-----~~p~~---~~~--------~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                                       +     ..|..   .-|        +++...|...++.|+.....+.+|++.+
T Consensus        93 ~~p~~~~~~~g~n~~~~~~~g~g~~p~ds~G~pWt~~yv~~~Gdl~aDL~~niaaE~~Ar~~Y~rl~~~t  162 (266)
T 1o9i_A           93 RDPSLATTMAGMDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSMT  162 (266)
T ss_dssp             HCTTHHHHHHHSCHHHHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cchhhHhhhcCCChHHHHhcCCCCCccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                             0     01110   012        4688999999999999999999988754

>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}

Probab=97.13  E-value=0.005  Score=38.86  Aligned_cols=57  Identities=23%  Similarity=0.303  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG   75 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rG   75 (120)
                      ++..++. .|..|+.|.+.|..++..++     -|.+-+.|..-++||.+|+-.|++.+..++
T Consensus        19 d~~Rai~-sl~~EleAI~~Y~q~a~~~~-----d~~~k~vl~~i~~EEkeH~g~~lelLrr~D   75 (95)
T 3k6c_A           19 DMHRAII-SLREELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRRCD   75 (95)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            4677776 56789999999999999988     367889999999999999999999998876

>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A

Probab=97.12  E-value=0.005  Score=38.87  Aligned_cols=57  Identities=23%  Similarity=0.309  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG   75 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rG   75 (120)
                      .+..++. .|..|+.|.+.|..++.-++  |   |.+.+.+..-++||.+|+-.|.+.+....
T Consensus        19 d~~rai~-aL~~EleAI~~Y~q~A~~t~--D---~evk~vl~~iadEEkeH~g~~l~~Lrr~d   75 (95)
T 1zpy_A           19 DMHRAII-SLREELEAVDLYNQRVNACK--D---KELKAILAHNRDEEKEHAAMLLEWIRRCD   75 (95)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHhCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            5566777 56699999999999999999  3   57889999999999999999999998774

>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A

Probab=97.03  E-value=0.015  Score=43.78  Aligned_cols=107  Identities=15%  Similarity=0.158  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHH---HHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccc----
Q psy12315         12 AETEEKINKQI---NLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR--GGTLKLVD----   82 (120)
Q Consensus        12 ~~~~~~Ln~qi---~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r--Gg~v~~~~----   82 (120)
                      +....+|.+|+   .-|+.++.+|+..+.-|... ..++.+...+..-+.||+.|++.+..-|.++  |..+....    
T Consensus        20 P~~A~~L~eq~GG~~GElsAamqYl~Qs~~~~~~-~~~~~~~dLL~dIatEEL~HlEmvat~I~~L~~Ga~~~~~~~~~~   98 (302)
T 2v8t_A           20 PNAAAAVQALLGGRFGEMSTLMNYMYQSFNFRGK-KALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVD   98 (302)
T ss_dssp             HHHHHHHTHHHHSTTSHHHHHHHHHHHHHHCSCT-TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCCCCCCCC
T ss_pred             HHHHHHHHHHhCCCccHHHHHHHHHHHHccCCCC-cchHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCChhhhhcccc
Confidence            45556666664   57999999999999999932 2355789999999999999999999999999  54443311    


Q ss_pred             -----c------------------CCCCc---Ccc--------CCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         83 -----V------------------KAPAR---QEW--------GTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        83 -----i------------------~~p~~---~~~--------~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                           +                  ..|..   .-|        +++...|...++.|+.....+.+|++.+
T Consensus        99 ~~~~p~~~a~~~~~~~~~i~~g~g~~p~ds~G~pWta~Yv~~~Gdl~aDL~~NiaAE~~Ar~~Y~rL~~~t  169 (302)
T 2v8t_A           99 PASTPLGFAKDVRNAAHFIAGGANSLVMGAMGEHWNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEMT  169 (302)
T ss_dssp             GGGCTTGGGGGSSCSHHHHTSSSCCCSBCTTSCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cccchHHHhhhcCCcHHHhhcCCCCCccCCCCCCCCcchhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                 0                  00110   012        3688999999999999999999888654

>1zs3_A Lactococcus lactis Mg1363 DPSA; oxidative stress, DNA binding, lactic acid bacteria, DNA binding protein; 2.70A {Lactococcus lactis} SCOP: a.25.1.1

Probab=96.92  E-value=0.026  Score=39.44  Aligned_cols=101  Identities=10%  Similarity=0.074  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--------c-cc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK--------L-VD   82 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~--------~-~~   82 (120)
                      +.+.+.||..+..-+.-...+....-+-.  +   |+|..+|..+..+.+++...+.+++...||.|.        . ..
T Consensus        25 ~~~~~~Ln~~LAd~~~Ly~k~k~~HWnV~--G---~~FH~~fee~y~~~~~~~D~iAERi~~LG~~p~~t~~e~~~~~s~   99 (182)
T 1zs3_A           25 PTAGAMLGHVLSNLFIENIRLTQAGIYAK--S---PVKCEYLREIAQREVEYFFKISDLLLDENEIVPSTTEEFLKYHKF   99 (182)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHCS--S---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccceeeE--C---hhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhcCc
Confidence            35777888888876666555555443333  3   456999999999999999999999999999985        4 55


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+......+.+..++++..++--..+...++++.+
T Consensus       100 i~e~~~~~~~~~~e~l~~L~~d~~~~~~~~r~~i~  134 (182)
T 1zs3_A          100 ITEDPKAKYWTDEDLLESFIVDFQAQNMFITRAIK  134 (182)
T ss_dssp             CCCCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66543212457889999999998898888887654

>1zuj_A Hypothetical protein llacc01001955; oxidative stress, DPS, DNA binding, lactic acid bacteria, DN protein; 2.90A {Lactococcus lactis} SCOP: a.25.1.1

Probab=96.79  E-value=0.033  Score=38.85  Aligned_cols=100  Identities=9%  Similarity=0.030  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--------c-cc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK--------L-VD   82 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~--------~-~~   82 (120)
                      +.+.+.||..+..-+.-...+....-+-.  +   |+|..+|..+..+.+++...+.+++...||.|.        . ..
T Consensus        24 ~~~~~~Ln~~LAd~~~Ly~k~~~~HWnV~--G---~~FH~~fee~y~~~~~~~D~iAERi~~LG~~p~~t~~e~~~~~s~   98 (179)
T 1zuj_A           24 PTAGAMLSHVLSNIFYEKISLMQAGLYAK--S---ANYRIKFREIALKEDEWFYLISEQLLDENELVPTTLDEFVSNHKF   98 (179)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHCS--S---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccceeeE--C---hhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhcCc
Confidence            46778888888876666555555443333  3   456999999999999999999999999999985        4 55


Q ss_pred             cCCCCcCc-cCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         83 VKAPARQE-WGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        83 i~~p~~~~-~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      |+.... . +.+..++++..++--..+...++++.+
T Consensus        99 i~e~~~-~~~~~~~e~l~~l~~d~~~~~~~~r~~i~  133 (179)
T 1zuj_A           99 IENDPK-AKYWTDEALIENFINDFQNQNLFIGRAIK  133 (179)
T ss_dssp             CCCCTT-GGGSCHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred             CCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            665433 4 358889999999988888888887653

>2ib0_A Conserved hypothetical alanine rich protein; 4-helix bundle, structural genomics, PSI-2, protein structur initiative; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.9

Probab=96.34  E-value=0.14  Score=35.41  Aligned_cols=97  Identities=16%  Similarity=0.165  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC--CCCcCc
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVK--APARQE   90 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~--~p~~~~   90 (120)
                      .-.++||..+..|+.+.|-|=..+.+...+   ....   -.......+.|.+.++.-+.++|+.|....-.  -|  ..
T Consensus        21 ~d~~aL~~ALaaEhaAIyaYGv~~a~l~~~---~~~~---a~~~~~~HrarRD~L~~~l~~~G~~pp~a~aaY~lP--~~   92 (170)
T 2ib0_A           21 ADNAALCDALAVEHATIYGYGIVSALSPPG---VNFL---VADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLP--MQ   92 (170)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSCGG---GHHH---HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCS--SC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccChH---HHHH---HHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCcCCCC--CC
Confidence            346799999999999999998888888732   3333   33444778999999999999999987432221  12  13


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      -++..+++..+..+|......+..+..
T Consensus        93 v~d~asa~~lAa~lE~~~A~ay~~~v~  119 (170)
T 2ib0_A           93 VSSAADAARLAVRMENDGATAWRAVVE  119 (170)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999888864

>3hl1_A Ferritin like protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Caulobacter vibrioides}

Probab=95.60  E-value=0.11  Score=39.39  Aligned_cols=68  Identities=19%  Similarity=0.162  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD   82 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~   82 (120)
                      +++..+|+..|..|+...-.||..++--.  +.+ ...+.-.+.-+.|||-|.....+-++-.||.|.+..
T Consensus         9 ~~L~~~Lq~Ai~lE~stIp~YL~a~ySi~--~~n-~~~~~~i~~V~~eEMlHl~l~aNll~AiGg~p~~~~   76 (317)
T 3hl1_A            9 PRLYQHFQGAIDLELWTIPYYLTVLYSIK--DPT-TVPYRLIQAAVYQEMLHAQLVSNIANAYGYSPTLSA   76 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHBS--CTT-SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCC
Confidence            47889999999999999999999887777  433 368889999999999999999999999999988754

>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1

Probab=95.49  E-value=0.1  Score=35.01  Aligned_cols=56  Identities=21%  Similarity=0.289  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      .+..+|...+..|..|...|..++..+.  |   +...+.|...+.+|..|...|.+++..
T Consensus       100 ~~~~~l~~ai~~E~~a~~~Y~~~a~~~~--d---~~~k~l~~~la~eE~~H~~~l~~~~~~  155 (157)
T 1vjx_A          100 TLKEVLDIAISVEKDSIILYYELKDGLV--N---SDAQKTVKKIIDQEKEHLRKLLEMKRE  155 (157)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCC--S---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4788999999999999999999999987  3   689999999999999999999988764

>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7

Probab=95.12  E-value=0.22  Score=35.41  Aligned_cols=68  Identities=22%  Similarity=0.337  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAP   86 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p   86 (120)
                      .....|.++.+-|..|+..=++|=.-|-    ..+++..-+-..+.||+.|-++.++.|.+||  +.++++.++
T Consensus        27 nl~~iL~DHA~CE~KAA~tAm~Li~rYp----~~~~Lv~~m~~LarEEL~HFeqVl~im~~Rg--i~l~~~~~~   94 (206)
T 2itb_A           27 DQETLLIDHKNCEFKAASTALSLIAKYN----THLDLINMMSRLAREELVHHEQVLRLMKRRG--VPLRPVSAG   94 (206)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHTT----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCC----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCCCCCCCC
Confidence            3456899999999999999888866554    4789999999999999999999999999999  555666554

>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}

Probab=95.08  E-value=0.073  Score=35.71  Aligned_cols=59  Identities=19%  Similarity=0.314  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         13 ETEEKINKQINLELYAS-YVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as-~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      .+.+-|...+.-|.++. ..|..++..+..+  |.+..+.+|+..+..|..|+.++.+.+..
T Consensus        82 ~T~enL~~A~~GE~~e~~~~Y~~~a~~A~~e--G~~~ia~~f~~~a~~E~~Ha~~~~~~l~~  141 (144)
T 4di0_A           82 TSRQNLQSAIAGETHEYTDMYPGMAKTARDE--GFEEIANWFETLAKAERSHANRYTKALDG  141 (144)
T ss_dssp             SHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHC--CcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            35778899999999995 7999999999954  89999999999999999999999988753

>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1

Probab=94.87  E-value=0.26  Score=33.33  Aligned_cols=59  Identities=15%  Similarity=0.100  Sum_probs=52.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR   74 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r   74 (120)
                      ...+...|...+..|..+...|..++....  |   +...+.|...+.+|..|...|-+.+...
T Consensus       103 ~~~~~~~L~~ai~~E~~a~~~Y~~~a~~~~--d---~~~r~l~~~ia~eE~~H~~~l~~~l~~l  161 (175)
T 2fzf_A          103 VQDIIDLIRWAMKAEEIAAEFYLKLEEMVK--E---EEKKRLMRYLADMERGHYYTLRAEYELL  161 (175)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--S---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHhhCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356789999999999999999999999876  3   7899999999999999999998887653

>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1

Probab=94.79  E-value=0.13  Score=33.96  Aligned_cols=60  Identities=22%  Similarity=0.372  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         12 AETEEKINKQINLELYA-SYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~a-s~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      ..+.+.|...+..|..+ ...|-.++..+.  ..+.+..+.+|+..+.+|.+|+..+-+.+..
T Consensus        79 ~~~~e~L~~al~~E~~~~~~~y~~~~~~A~--~egd~~~~~~f~~i~~~E~~H~~~~~~~l~~  139 (144)
T 1j30_A           79 GTLEQMIESAIAGETYEWTQMYPGFAKVAR--EEGFPEVAEWFETLARAEKSHAEKFQNVLKQ  139 (144)
T ss_dssp             SSHHHHHHHHHHHHHHHHHTHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHhHHHHHHHHHHHHHHHHH--HcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35778999999999999 799999999999  4589999999999999999999999887754

>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}

Probab=94.06  E-value=0.0092  Score=45.78  Aligned_cols=60  Identities=22%  Similarity=0.211  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGG   76 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg   76 (120)
                      .++.++|...|..|+.+...|..+|..++.     +..-+.|...++||.+|+..|.+.+...++
T Consensus        18 ~el~~air~ai~~E~eAi~~Y~q~A~~~~d-----~~~K~vl~~ia~EEk~H~~~f~~ll~~l~~   77 (345)
T 2e0z_A           18 EELMEILRLAIIAELDAINLYEQMARYSED-----ENVRKILLDVAREEKAHVGEFMALLLNLDP   77 (345)
T ss_dssp             -----------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence            467888999999999999999999999983     467789999999999999999998887654

>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}

Probab=93.18  E-value=0.37  Score=31.15  Aligned_cols=64  Identities=14%  Similarity=0.165  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTL   78 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v   78 (120)
                      .+.+.|...+..|-.+...|..+...++  ..+=++...+|.....+|..|+..|-.++.+-+|.+
T Consensus        85 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~--~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~~~~~~  148 (149)
T 2qqy_A           85 DVREMLEYARQSEYETIKRYEKRKEQAA--NLNMTELVVKLEDMIADETNHMEELDRLLNDKAMVL  148 (149)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            5678899999999999999999999988  446789999999999999999999999887766543

>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*

Probab=92.41  E-value=0.61  Score=31.05  Aligned_cols=60  Identities=18%  Similarity=0.132  Sum_probs=52.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN   72 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~   72 (120)
                      ...+.+.+...+..|..+...|..+...|.  ..+-+..+.||+....+|.+|+..|-+++.
T Consensus        80 ~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~--~~~D~~t~~~l~~il~eEeeH~~~l~~~L~  139 (159)
T 4am5_A           80 GQTVKEVLESDLAAEREARALYQEGAAYAA--SVGDFPSKNLFEELMGDEEHHIDFLETQLD  139 (159)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345778899999999999999999999999  557899999999999999999987755543

>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A

Probab=92.39  E-value=0.57  Score=32.57  Aligned_cols=58  Identities=12%  Similarity=0.201  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         14 TEEKINKQINLELYA-SYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        14 ~~~~Ln~qi~~El~a-s~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      +.+.|...+.-|.+. ...|-.++..+..+  |.+..+.+|+..+..|..|+.++-+-+..
T Consensus       116 ~~~~L~~A~~GE~~E~~~mYp~fA~~A~eE--G~~eiA~~F~~ia~~Ek~H~~ry~~ll~~  174 (179)
T 3qhb_A          116 LRRALETALEVETIESQKTYPAFAKLAAEQ--GNMEVATAFEAIVKSETKHANWVKRALEN  174 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455688999999985 67899999999954  89999999999999999999999876654

>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8

Probab=91.56  E-value=1.4  Score=29.41  Aligned_cols=57  Identities=19%  Similarity=0.204  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR   74 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r   74 (120)
                      .+..+|.-.+..|..+...|..++....  |   +...+.|...+.+|.+|...|.+.+...
T Consensus        93 ~~~~~l~~A~~~E~~a~~fY~~~a~~~~--d---~~~k~~~~~la~eE~~H~~~l~~~~~~~  149 (167)
T 2oh3_A           93 TPYHALRYARDNEIRGMEYYKEAAANSA--D---PEVKRLGADFAAEEAEHVVALDKWIEKT  149 (167)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            4678999999999999999999988776  3   6889999999999999999999887544

>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A

Probab=90.59  E-value=2.3  Score=27.44  Aligned_cols=82  Identities=17%  Similarity=0.135  Sum_probs=64.3

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQE   90 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~   90 (120)
                      .+++..+|...+..|+.+...|-.+|......     ..-+-+..-.++|+.|...|..-.. -|         .|    
T Consensus        30 ~~el~~lIr~~ikaE~~AI~~Y~qLA~~AP~e-----e~k~iI~eIr~DE~rH~~~F~~lY~-TG---------~p----   90 (115)
T 2hz8_A           30 EQELARLIQEIVKAEKQAVKVYKEAAEKARNP-----EKRQVIDKILEDEEKHIEWLKAASK-QG---------NA----   90 (115)
T ss_dssp             HHHHTTTHHHHHHHHHHHHHHHHHHHHSCCCT-----TTTTTHHHHHHHHHHHHHHHHHHHH-SS---------CC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHH-hC---------Ch----
Confidence            44667788888899999999999999998854     2345567788999999999988777 44         34    


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHH
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVI  112 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l  112 (120)
                       .|-.+.++.|+.-|.+....+
T Consensus        91 -~sY~eGL~~A~~~Eqeave~Y  111 (115)
T 2hz8_A           91 -EQFASLVQQILQDEQRHVEEI  111 (115)
T ss_dssp             -TTHHHHHHHHHHHHHHHHHHT
T ss_pred             -HhHHHHHHHHHHHHHHHHHHH
Confidence             357788999999998776554

>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*

Probab=90.01  E-value=1.7  Score=28.50  Aligned_cols=60  Identities=12%  Similarity=0.026  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      ..+.+.|...+..|-.+...|..+...++  +.+=++.+.||.....+|..|+..|-+++..
T Consensus        83 ~~~~e~l~~~l~~E~~~~~~~~~~~~~A~--~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~  142 (161)
T 3uoi_A           83 QTLREQFEADLAIEYDVLNRLKPGIVMCR--EKQDTTSAVLLEKIVADEEEHIDYLETQLEL  142 (161)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678899999999999999999999998  4478899999999999999999998887654

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*

Probab=89.71  E-value=1.7  Score=29.10  Aligned_cols=57  Identities=11%  Similarity=-0.027  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYL   71 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi   71 (120)
                      .+.+.|...+..|-.+...|..+...+.  ..+=+....+|.....+|.+|+..|-.++
T Consensus        87 ~~~e~l~~al~~E~~~~~~y~~l~~~a~--~~~D~~t~~~l~~~~~eEe~h~~~l~~~l  143 (179)
T 1nfv_A           87 AVPVIYESDADQEDATIEAYSQFLKVCK--EQGDIVTARLFERIIEEEQAHLTYYENIG  143 (179)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5778999999999999999999999997  34678999999999999999997665554

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*

Probab=89.63  E-value=1.8  Score=28.83  Aligned_cols=61  Identities=11%  Similarity=0.017  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR   74 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r   74 (120)
                      ..+.+.|...+..|-.+...|..+...++  ..+=++...+|.....+|..|+..|.+++...
T Consensus        83 ~~~~e~l~~al~~E~~~~~~y~~l~~~a~--~~~D~~t~~~l~~~l~eEe~h~~~l~~~l~~i  143 (174)
T 3qb9_A           83 QTLREQFEADLAIEYDVLNRLKPGIVMCR--EKQDTTSAVLLEKIVADEEEHIDYLETQLELM  143 (174)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35678899999999999999999999998  44678999999999999999999998887653

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*

Probab=89.13  E-value=2.2  Score=27.68  Aligned_cols=60  Identities=18%  Similarity=0.086  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      ..+.+.|...+..|-.+...|..+...++.  .+=++...+|.....+|.+|...|-.++..
T Consensus        81 ~~~~e~l~~~l~~E~~~~~~y~~~~~~a~~--~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~  140 (158)
T 2y3q_A           81 EDVEEMLRSDLALELDGAKNLREAIGYADS--VHDYVSRDMMIEILRDEEGHIDWLETELDL  140 (158)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356788999999999999999999999973  367899999999999999999998777643

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1

Probab=88.51  E-value=2.2  Score=27.82  Aligned_cols=59  Identities=15%  Similarity=0.054  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      .+.+.|...+..|-.+...|..+...++  ..+-++.+.+|.....+|.+|...|-.++..
T Consensus        82 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~--~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~  140 (161)
T 1jgc_A           82 GPRETLECDLAGEHDALKLYREARDYCA--EVGDIVSKNIFESLITDEEGHVDFLETQISL  140 (161)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678899999999999999999999998  3467899999999999999999988877643

>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1

Probab=88.41  E-value=2  Score=28.17  Aligned_cols=60  Identities=17%  Similarity=0.192  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      ..+.+.|...+..|-.....|..+...++  ..+=++.+.+|.....+|-.|+..|.+.+..
T Consensus        81 ~~~~e~l~~~l~~E~~~~~~~~~~~~~A~--~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~  140 (161)
T 3gvy_A           81 QTLRETLDADLAAEHDARTLYIEARDHCE--KVRDYPSKMLFEELIADEEGHIDYLETQIDL  140 (161)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHT--TTTCHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45778899999999999999999999998  5578999999999999999999888877643

>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}

Probab=88.01  E-value=1.7  Score=30.97  Aligned_cols=67  Identities=9%  Similarity=0.104  Sum_probs=41.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCccCCHHHHHH-HHHHHHHHHHHHHHHHHH
Q psy12315         46 LPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFS-HALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        46 l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~~~~~~~l~-~aL~~Ek~v~~~l~~l~~  117 (120)
                      +..+..||++.|.=|.++|.+|-+--.+-.+.+..+.+.    ..|..+.+..+ .+-.|. .+.+.|.++.+
T Consensus        34 ~~el~~f~~eRa~iE~eYak~L~kLa~~~~~~~~~gs~~----~~w~~~~~~~e~~a~~h~-~~a~~l~~~~~  101 (276)
T 2v0o_A           34 TKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFA----PVWDVFKTSTEKLANCHL-DLVRKLQELIK  101 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSSG----GGHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHH----HHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence            456999999999999999999999887765543322222    24665554443 222222 33444444443

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*

Probab=87.59  E-value=3.2  Score=26.65  Aligned_cols=58  Identities=17%  Similarity=0.118  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN   72 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~   72 (120)
                      ...+.|...+..|-.+...|..+...++  ..+-++.+.+|.....+|.+|...|-.++.
T Consensus        82 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~--~~~D~~t~~~l~~~~~eee~h~~~l~~~l~  139 (155)
T 2fkz_A           82 HTKEMLECDLKLEQAGLPDLKAAIAYCE--SVGDYASRELLEDILESEEDHIDWLETQLD  139 (155)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5778899999999999999999999998  446789999999999999999887766553

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=87.15  E-value=2.4  Score=29.75  Aligned_cols=60  Identities=18%  Similarity=0.126  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12315         13 ETEEKINKQINLE-LYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR   74 (120)
Q Consensus        13 ~~~~~Ln~qi~~E-l~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r   74 (120)
                      .+.+.|...+..| ...+..|-.++.....  .|....+.+|+..+.+|.+|+.++-+-+...
T Consensus       103 st~enL~~a~~gE~~E~t~my~~~a~~A~e--Egd~~~a~~f~~i~~~E~~H~~~~~~ll~~l  163 (202)
T 1yuz_A          103 SCDLNLISGANGEIYETSDMYPAFIRKAQE--EGNSKAVHVFTRAKLAESVHAERYLAAYNDI  163 (202)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHhHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4678899999999 8888999999999994  4899999999999999999999998888553

>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A

Probab=86.71  E-value=2.6  Score=27.35  Aligned_cols=58  Identities=17%  Similarity=0.051  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHH-HHHHHHHHHHHHH
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDE-ESEHAHKLIKYLN   72 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~e-E~~hA~~li~yi~   72 (120)
                      .+.+.|...+..|-.....|..+...++  +.+=++.+.+|.....+ |.+|+..|-+.+.
T Consensus        81 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~--~~~D~~t~~~l~~~~~e~ee~h~~~l~~~l~  139 (154)
T 3r2k_A           81 TVPEMLEADLKLERHVRAALAKGIALCE--QHKDFVSRDILKAQLADTEEDHAYWLEQQLG  139 (154)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678888999999999999999999998  44788999999999999 9999998877664

>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1

Probab=86.24  E-value=3.1  Score=27.84  Aligned_cols=60  Identities=10%  Similarity=0.060  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR   74 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r   74 (120)
                      .+.+.|...+..|-.+...|..+...+..  .+-+....||...-.|+.+|...+-+++...
T Consensus        82 ~~~e~l~~al~~E~~~~~~~~~l~~~a~~--~~D~~~~~~l~~~l~Eq~e~~~~l~~~l~~l  141 (167)
T 1krq_A           82 SLLDVFEKTYEHEQFITKSINTLVEHMLT--HKDYSTFNFLQWYVSEQHEEEALFRGIVDKI  141 (167)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999984  4678899999998888888988887777553

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=85.98  E-value=3.5  Score=28.14  Aligned_cols=64  Identities=16%  Similarity=0.062  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy12315         15 EEKINKQINLELY-ASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL   80 (120)
Q Consensus        15 ~~~Ln~qi~~El~-as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~   80 (120)
                      .+-|...+.-|.. ....|-.++..+..  .|.+..+.+|...+..|..|+.++-+-+........+
T Consensus        69 ~enL~~a~~gE~~e~~~mY~~~a~~A~e--eg~~~~a~~f~~i~~~E~~H~~~~~~~l~~l~~~~~~  133 (170)
T 3pwf_A           69 PENLQMGIEGETFEVEEMYPVYNKAAEF--QGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGEDI  133 (170)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence            5667777788887 48999999999995  4899999999999999999999998877766554433

>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1

Probab=85.92  E-value=4.2  Score=27.09  Aligned_cols=60  Identities=8%  Similarity=0.009  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR   74 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r   74 (120)
                      .+.+.|...+..|......|..+...+..  .+-+..+.||...-.++.+|...+-+++...
T Consensus        82 ~~~e~l~~al~~E~~~~~~~~~l~~~a~~--~~D~~~~~fl~~~l~eq~e~~~~l~~~l~~l  141 (165)
T 1eum_A           82 SLDELFQETYKHEQLITQKINELAHAAMT--NQDYPTFNFLQWYVSEQHEEEKLFKSIIDKL  141 (165)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57889999999999999999999999994  4788899999988889999988888877553

>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}

Probab=85.02  E-value=3.5  Score=27.89  Aligned_cols=59  Identities=17%  Similarity=0.122  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN   72 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~   72 (120)
                      ..+.+.|...+..|-.+...|..+...++  +.+=++.+.||.....+|..|+..|-+.+.
T Consensus       102 ~~~~e~l~~~l~~E~~~~~~y~~~i~~A~--~~~D~~t~~~L~~il~eEe~h~~~l~~~l~  160 (182)
T 3fvb_A          102 QNVKEVLEADLKGEYDARASYKESREICD--KLGDYVSKQLFDELLADEEGHIDFLETQLD  160 (182)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45778899999999999999999999988  447789999999999999999988776654

>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A

Probab=84.95  E-value=3.4  Score=28.56  Aligned_cols=58  Identities=14%  Similarity=0.173  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         13 ETEEKINKQINLE-LYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN   72 (120)
Q Consensus        13 ~~~~~Ln~qi~~E-l~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~   72 (120)
                      .+.+.|...+..| ......|-.++.....  .+....+.||+.-+.+|.+|+..+-+-+.
T Consensus        82 s~~e~l~~al~~E~~e~t~~y~~~~~~A~e--egd~~~~~~f~~~~~~E~ehe~~~~~~l~  140 (191)
T 1lko_A           82 DTHANLIASAAGEHHEYTEMYPSFARIARE--EGYEEIARVFASIAVAEEFHEKRFLDFAR  140 (191)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5778899999999 7888899999999994  48999999999999999999988776663

>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}

Probab=81.41  E-value=8.9  Score=25.02  Aligned_cols=57  Identities=23%  Similarity=0.244  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      +.+.|...+..|-.+...|..+...++  .. =++.+.+|.....++.+|...|-.++..
T Consensus       103 ~~e~l~~~l~~E~~~~~~~~~~~~~a~--~~-D~~t~~~l~~~~~ee~~h~~~l~~~l~~  159 (170)
T 2vzb_A          103 SVSLLNQNVSSERCAILRYQEIANFTN--GK-DYTTCDIAKHILAEEEEHEQDLQDYLTD  159 (170)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHT--TT-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--cc-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            788999999999999999999999996  33 5789999999999999999888777653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	120
d1z6om1	191	a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper(T	7e-37
d1rcda_	171	a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesb	8e-36
d1z6oa1	200	a.25.1.1 (A:13-212) (Apo)ferritin {Cabbage looper(	2e-35
d1bg7a_	173	a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesb	4e-35
d1r03a_	171	a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens),	5e-35
d1lb3a_	179	a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus)	7e-35
d1s3qa1	162	a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Arch	2e-26
d1vlga_	164	a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritim	2e-25
d1euma_	161	a.25.1.1 (A:) Non-hem ferritin {Escherichia coli,	3e-25
d1krqa_	165	a.25.1.1 (A:) Non-hem ferritin {Campylobacter jeju	8e-23
d2htna1	158	a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1	3e-13
d1nf4a_	169	a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {De	4e-13
d1jgca_	160	a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rh	4e-12
d2fkza1	154	a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1	2e-11
d1yuza1	135	a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain	4e-10
d1lkoa1	146	a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain	3e-08
d1j30a_	141	a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon	4e-06
d2fzfa1	158	a.25.1.1 (A:10-167) Hypothetical protein PF1190 {A	5e-04

>d1z6om1 a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]} Length = 191

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]

 Score =  122 bits (306), Expect = 7e-37
 Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 7/119 (5%)

Query: 1   MAVSQVRQNF---HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHAS 57
           +   Q+ +++   H      + +QI +E+ AS  YL+M AHF +DVV  PG ++ F  A+
Sbjct: 5   VNPVQIPKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAA 64

Query: 58  DEESEHAHKLIKYLNKRGGTLKLV----DVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
            EE EHA KLI+YL  RG     V     V+ P R  W    EA  HAL +E DV + I
Sbjct: 65  SEEREHAMKLIEYLLMRGELTNDVSSLLQVRPPTRSSWKGGVEALEHALSMESDVTKSI 123

>d1rcda_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]} Length = 171

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

 Score =  118 bits (297), Expect = 8e-36
 Identities = 55/112 (49%), Positives = 79/112 (70%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH + E  +N+ +NL+ ++SYVYLSM+++F+RD VAL   +K+F+  S+EE EH
Sbjct: 1   SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEH 60

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYF 115
           A KLI+Y N+RGG + L  V+ P R +W    EA   AL+L+K VNQ ++  
Sbjct: 61  AEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALLDL 112

>d1z6oa1 a.25.1.1 (A:13-212) (Apo)ferritin {Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]} Length = 200

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]

 Score =  118 bits (297), Expect = 2e-35
 Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 5/111 (4%)

Query: 7   RQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHK 66
               H     ++     L L  SY YL  +A+F+       G SK FK  SDE       
Sbjct: 18  EYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTID 77

Query: 67  LIKYLNKRGGTLKLVDVKAPA-----RQEWGTTEEAFSHALQLEKDVNQVI 112
           +IK++ KRG  +                      EA + AL  +K++ +  
Sbjct: 78  IIKHVTKRGDKMNFDQHSTMKTERKNYTAENHELEALAKALDTQKELAERA 128

>d1bg7a_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]} Length = 173

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

 Score =  116 bits (292), Expect = 4e-35
 Identities = 65/109 (59%), Positives = 79/109 (72%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQVRQNFH + E  IN+ +N+ELYASY YLSM+ +FDRD +AL  ++K+FK  S EE EH
Sbjct: 2   SQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREH 61

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           A KL+K  NKRGG + L DV+ P R EWG T EA   ALQLEK VNQ +
Sbjct: 62  AEKLMKDQNKRGGRIVLQDVQKPERDEWGNTLEAMQAALQLEKTVNQAL 110

>d1r03a_ a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens), mitocondial isoform [TaxId: 9606]} Length = 171

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Human (Homo sapiens), mitocondial isoform [TaxId: 9606]

 Score =  116 bits (291), Expect = 5e-35
 Identities = 61/109 (55%), Positives = 80/109 (73%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           S+VRQNFH ++E  IN+QINLELYASYVYLSM+ +F RD VAL   S+YF H S EE+EH
Sbjct: 1   SRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEH 60

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           A KL++  N+RGG ++L D+K P + +W +   A   AL LEK+VNQ +
Sbjct: 61  AEKLMRLQNQRGGRIRLQDIKKPEQDDWESGLHAMECALLLEKNVNQSL 109

>d1lb3a_ a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]} Length = 179

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  116 bits (291), Expect = 7e-35
 Identities = 49/109 (44%), Positives = 73/109 (66%)

Query: 4   SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEH 63
           SQ+RQN+  E E  +N+ +NL L ASY YLS+   FDRD VAL G+  +F+  ++E+ E 
Sbjct: 1   SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREG 60

Query: 64  AHKLIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           A +L+++ N RGG     DV+ P++ EWG T+EA   AL +EK++NQ +
Sbjct: 61  AERLLEFQNDRGGRALFQDVQKPSQDEWGKTQEAMEAALAMEKNLNQAL 109

>d1s3qa1 a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 162

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 94.3 bits (234), Expect = 2e-26
 Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 3/103 (2%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
           +  E +N+QIN E+Y++Y+YLSM+++FD   + L G S + +    EE  HA K+  +++
Sbjct: 5   KMVEALNRQINAEIYSAYLYLSMASYFDS--IGLKGFSNWMRVQWQEELMHAMKMFDFVS 62

Query: 73  KRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYF 115
           +RGG +KL  V+ P   EW +   AF H  + E +V + I   
Sbjct: 63  ERGGRVKLYAVEEP-PSEWDSPLAAFEHVYEHEVNVTKRIHEL 104

>d1vlga_ a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritima [TaxId: 2336]} Length = 164

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Thermotoga maritima [TaxId: 2336]

 Score = 91.6 bits (227), Expect = 2e-25
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 3/103 (2%)

Query: 10  FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIK 69
              +  + +N Q+N E+Y+SY+YLSM+ +FD +     G + + K  + EE  HA K  +
Sbjct: 4   ISEKVRKALNDQLNREIYSSYLYLSMATYFDAEG--FKGFAHWMKKQAQEELTHAMKFYE 61

Query: 70  YLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           Y+ +RGG ++L  ++ P    W   ++AF  AL+ E+ V Q I
Sbjct: 62  YIYERGGRVELEAIEKP-PSNWNGIKDAFEAALKHEEFVTQSI 103

>d1euma_ a.25.1.1 (A:) Non-hem ferritin {Escherichia coli, FtnA [TaxId: 562]} Length = 161

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Escherichia coli, FtnA [TaxId: 562]

 Score = 91.2 bits (226), Expect = 3e-25
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
           E  EK+N+Q+NLELY+S +Y  MSA          G + + +  + EE  H  +L  YL 
Sbjct: 4   EMIEKLNEQMNLELYSSLLYQQMSAWCSYH--TFEGAAAFLRRHAQEEMTHMQRLFDYLT 61

Query: 73  KRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
             G   ++  V++P   E+ + +E F    + E+ + Q I
Sbjct: 62  DTGNLPRINTVESP-FAEYSSLDELFQETYKHEQLITQKI 100

>d1krqa_ a.25.1.1 (A:) Non-hem ferritin {Campylobacter jejuni [TaxId: 197]} Length = 165

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Campylobacter jejuni [TaxId: 197]

 Score = 85.0 bits (210), Expect = 8e-23
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
             E  + +N+QIN E+YA+ +YLSMS+    +   L G   +    + EES+HA KLI Y
Sbjct: 3   SKEVVKLLNEQINKEMYAANLYLSMSSWCYENS--LDGAGAFLFAHASEESDHAKKLITY 60

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           LN+    ++L +VK P  Q + +  + F    + E+ + + I
Sbjct: 61  LNETDSHVELQEVKQP-EQNFKSLLDVFEKTYEHEQFITKSI 101

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]} Length = 158

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

 Score = 60.1 bits (145), Expect = 3e-13
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 4/105 (3%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
             +    +NK +  EL A   Y   +  F      L  ++    H S +E +HA + I+ 
Sbjct: 4   DTKVINYLNKLLGNELVAINQYFLHARMFKN--WGLKRLNDVEYHESIDEMKHADRYIER 61

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYF 115
           +    G   L D+           EE     L LE D  + +   
Sbjct: 62  ILFLEGLPNLQDLGKL--NIGEDVEEMLRSDLALELDGAKNLREA 104

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]} Length = 169

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

 Score = 60.1 bits (145), Expect = 4e-13
 Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 7   RQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHK 66
           R++  A+  E +NK   +EL+A + Y++     D   +    ++   K  + +E  HA  
Sbjct: 2   REDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDD--MDYGELAANMKLIAIDEMRHAEN 59

Query: 67  LIKYLNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYF 115
             + + + GG                     +      E    +    F
Sbjct: 60  FAERIKELGGEPTTQKEGKV--VTGQAVPVIYESDADQEDATIEAYSQF 106

>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]} Length = 160

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Rhodobacter capsulatus [TaxId: 1061]

 Score = 57.4 bits (138), Expect = 4e-12
 Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 4/102 (3%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
            A+  E +N  +  EL A   Y       +     L  ++K  +  S EE  HA K+I  
Sbjct: 4   DAKVIEFLNAALRSELTAISQYWVHFRLQED--WGLAKMAKKSREESIEEMGHADKIIAR 61

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           +    G   L  +     +      E     L  E D  ++ 
Sbjct: 62  ILFLEGHPNLQKL--DPLRIGEGPRETLECDLAGEHDALKLY 101

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]} Length = 154

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

 Score = 55.1 bits (132), Expect = 2e-11
 Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 4/102 (3%)

Query: 11  HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKY 70
                + +NK +  EL A   Y   +  ++     L  + K+  H S +E +HA KLIK 
Sbjct: 4   DKIVIQHLNKILGNELIAINQYFLHARMYED--WGLEKLGKHEYHESIDEMKHADKLIKR 61

Query: 71  LNKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           +    G   L ++          T+E     L+LE+     +
Sbjct: 62  ILFLEGLPNLQEL--GKLLIGEHTKEMLECDLKLEQAGLPDL 101

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]} Length = 135

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

 Score = 51.7 bits (123), Expect = 4e-10
 Identities = 14/94 (14%), Positives = 28/94 (29%), Gaps = 2/94 (2%)

Query: 12  AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYL 71
             T E +   I  E  A   Y + +            I++ F+  +  E  H       +
Sbjct: 5   GSTLENLKAAIAGETGAHAKYTAFAKAAREQ--GYEQIARLFEATAAAELIHIGLEYALV 62

Query: 72  NKRGGTLKLVDVKAPARQEWGTTEEAFSHALQLE 105
            +     +   V AP+         + ++    E
Sbjct: 63  AEMEPGYEKPTVAAPSAYSCDLNLISGANGEIYE 96

>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]} Length = 146

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

 Score = 47.0 bits (111), Expect = 3e-08
 Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 5/103 (4%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
            TE+ I      E  A   Y        +D      IS  F   +D+E EHA +L K+L 
Sbjct: 7   RTEKNILTAFAGESQARNRYNYFGGQAKKD--GFVQISDIFAETADQEREHAKRLFKFLE 64

Query: 73  KRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYF 115
                   +    PA     T     + A     +  ++   F
Sbjct: 65  GGDLE---IVAAFPAGIIADTHANLIASAAGEHHEYTEMYPSF 104

>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Length = 141

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical rubrerythrin
species: Archaeon Sulfolobus tokodaii [TaxId: 111955]

 Score = 41.2 bits (96), Expect = 4e-06
 Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 7/100 (7%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
           +T E + +    E  A+  YL  +   D +    P I+   +  ++ E+ HA   + ++ 
Sbjct: 6   KTAENLKQGFIGESMANRRYLYFAKRADEE--GYPEIAGLLRSIAEGETAHAFGHLDFIR 63

Query: 73  KRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEKDVNQVI 112
           + G T       A  +      +   S       +  Q+ 
Sbjct: 64  QGGLT-----DPATDKPIGTLEQMIESAIAGETYEWTQMY 98

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 158

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 35.3 bits (80), Expect = 5e-04
 Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 5/94 (5%)

Query: 13  ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN 72
             EE +   I  E+ A   Y S++            + +     ++EE +H   L K  +
Sbjct: 11  SLEELLGMAIKAEIGAREFYKSLAEKIKI-----EALKEKINWLAEEEKKHEALLRKLYS 65

Query: 73  KRGGTLKLVDVKAPARQEWGTTEEAFSHALQLEK 106
           +     ++V  K     E             +  
Sbjct: 66  QMFPGKEVVFPKEHIGPELQPVARELEKVQDIID 99

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	120
d1rcda_	171	(Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId:	100.0
d1bg7a_	173	(Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId:	100.0
d1lb3a_	179	(Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]	100.0
d1r03a_	171	(Apo)ferritin {Human (Homo sapiens), mitocondial i	100.0
d1z6oa1	200	(Apo)ferritin {Cabbage looper(Trichoplusia ni), L	100.0
d1z6om1	191	(Apo)ferritin {Cabbage looper(Trichoplusia ni), H	100.0
d1krqa_	165	Non-hem ferritin {Campylobacter jejuni [TaxId: 197	100.0
d1vlga_	164	Non-hem ferritin {Thermotoga maritima [TaxId: 2336	100.0
d1s3qa1	162	Non-hem ferritin {Archaeon Archaeoglobus fulgidus	100.0
d1euma_	161	Non-hem ferritin {Escherichia coli, FtnA [TaxId: 5	100.0
d2fkza1	154	Bacterioferritin (cytochrome b1) {Azotobacter vine	99.92
d1jgca_	160	Bacterioferritin (cytochrome b1) {Rhodobacter caps	99.92
d2htna1	158	Bacterioferritin (cytochrome b1) {Escherichia coli	99.91
d1nf4a_	169	Bacterioferritin (cytochrome b1) {Desulfovibrio de	99.89
d1yuza1	135	Nigerythrin, N-terminal domain {Desulfovibrio vulg	99.85
d1lkoa1	146	Rubrerythrin, N-terminal domain {Desulfovibrio vul	99.77
d1j30a_	141	Hypothetical rubrerythrin {Archaeon Sulfolobus tok	99.76
d1nnqa1	133	Rubrerythrin, N-terminal domain {Archaeon Pyrococc	99.27
d2oh3a1	152	Uncharacterized protein AMB4284 homologue {Magneto	99.21
d1o9ra_	162	Dodecameric ferritin homolog {Agrobacterium tumefa	98.99
d2fzfa1	158	Hypothetical protein PF1190 {Archaeon Pyrococcus f	98.88
d2ib0a1	142	Hypothetical protein Rv2844 {Mycobacterium tubercu	98.87
d1jiga_	146	Dodecameric ferritin homolog {Bacillus anthracis,	98.75
d1tjoa_	180	Dodecameric ferritin homolog {Archaeon Halobacteri	98.75
d1umna_	151	Dodecameric ferritin homolog {Streptococcus suis [	98.73
d1ji5a_	142	Dodecameric ferritin homolog {Bacillus anthracis,	98.71
d2fjca1	151	Dodecameric ferritin homolog {Treponema pallidum,	98.62
d1n1qa_	149	Dodecameric ferritin homolog {Bacillus brevis, Dps	98.58
d1dpsa_	159	Dodecameric ferritin homolog {Escherichia coli, Dp	98.58
d1ji4a_	144	Dodecameric ferritin homolog {Helicobacter pylori,	98.49
d1vjxa_	149	Hypothetical protein TM1526 {Thermotoga maritima [	98.46
d2bk6a1	150	Dodecameric ferritin homolog {Listeria innocua [Ta	98.24
d2yw6a1	141	Dodecameric ferritin homolog {Mycobacterium smegma	98.11
d1zpya1	91	Hypothetical protein NE0167 {Nitrosomonas europaea	97.28
d1zs3a1	171	Dodecameric ferritin homolog {Lactococcus lactis,	95.57
d2cwla1	299	Manganese catalase (T-catalase) {Thermus thermophi	95.52
d1jkva_	266	Manganese catalase (T-catalase) {Lactobacillus pla	95.22
d1zuja1	168	Dodecameric ferritin homolog {Lactococcus lactis,	95.01
d1yuza1	135	Nigerythrin, N-terminal domain {Desulfovibrio vulg	94.76
d2itba1	199	Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188 {Ps	94.64
d2oh3a1	152	Uncharacterized protein AMB4284 homologue {Magneto	94.34
d1vjxa_	149	Hypothetical protein TM1526 {Thermotoga maritima [	94.03
d1lkoa1	146	Rubrerythrin, N-terminal domain {Desulfovibrio vul	93.77
d2fzfa1	158	Hypothetical protein PF1190 {Archaeon Pyrococcus f	93.45
d2fkza1	154	Bacterioferritin (cytochrome b1) {Azotobacter vine	91.6
d1nnqa1	133	Rubrerythrin, N-terminal domain {Archaeon Pyrococc	91.3
d1nf4a_	169	Bacterioferritin (cytochrome b1) {Desulfovibrio de	91.02
d1j30a_	141	Hypothetical rubrerythrin {Archaeon Sulfolobus tok	89.31
d1jgca_	160	Bacterioferritin (cytochrome b1) {Rhodobacter caps	88.08
d2htna1	158	Bacterioferritin (cytochrome b1) {Escherichia coli	86.95

>d1rcda_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

Probab=100.00  E-value=1.1e-40  Score=233.59  Aligned_cols=115  Identities=48%  Similarity=0.799  Sum_probs=111.8

Q ss_pred             CcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q psy12315          4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDV   83 (120)
Q Consensus         4 s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i   83 (120)
                      ||+||||+++|+++||+||+.|++||++|++||+||+++++++|||++||+.+|.|||+||++|++||++|||.|.+++|
T Consensus         1 ~~~r~n~~~e~~~aLN~qi~~El~as~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~Ha~~l~~yi~~rgg~~~~~~i   80 (171)
T d1rcda_           1 SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSV   80 (171)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeccc
Confidence            79999999999999999999999999999999999999899999999999999999999999999999999999999999


Q ss_pred             CCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         84 KAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        84 ~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ++|+..+|.|++++|+.+|++|+.+++.|++|++.
T Consensus        81 ~~~~~~~~~s~~e~~~~al~~Ek~v~~~l~~l~~~  115 (171)
T d1rcda_          81 EKPERDDWANGLEALQTALKLQKSVNQALLDLHAV  115 (171)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98877799999999999999999999999999864

>d1bg7a_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

Probab=100.00  E-value=7.2e-41  Score=234.89  Aligned_cols=116  Identities=56%  Similarity=0.841  Sum_probs=110.4

Q ss_pred             CCcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Q psy12315          3 VSQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD   82 (120)
Q Consensus         3 ~s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~   82 (120)
                      .||+||||+++|+++||+||+.|++||++|++||.||+++++++||||+||+++|.|||+||++|++||++|||.|++++
T Consensus         1 ~~~~r~n~~~e~e~aLN~qi~~El~as~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~yl~~rgg~~~~~~   80 (173)
T d1bg7a_           1 DSQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGRIVLQD   80 (173)
T ss_dssp             CCTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             CCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence            38999999999999999999999999999999999999989999999999999999999999999999999999999999


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |++|+...|+++.++|+.+|++|+.+++.|++|++.
T Consensus        81 i~~~~~~~~~s~~~~~~~al~~Ek~v~~~l~~l~~~  116 (173)
T d1bg7a_          81 VQKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKV  116 (173)
T ss_dssp             CCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred             CCCCCCCCCCCHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999877789999999999999999999999999864

>d1lb3a_ a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.5e-40  Score=230.29  Aligned_cols=115  Identities=43%  Similarity=0.767  Sum_probs=112.0

Q ss_pred             CcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q psy12315          4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDV   83 (120)
Q Consensus         4 s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i   83 (120)
                      ||+||||+++|+++||+||+.||.||++|++||+||+++++++|||++||+++|.|||+||++|++||++|||+|++++|
T Consensus         1 ~~~r~n~~~e~e~aLN~qi~~El~as~~Yl~ma~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i   80 (179)
T d1lb3a_           1 SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQNDRGGRALFQDV   80 (179)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecCC
Confidence            79999999999999999999999999999999999999899999999999999999999999999999999999999999


Q ss_pred             CCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         84 KAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        84 ~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ++|+...|+++.++|+.+|++|+.+++.|++|++.
T Consensus        81 ~~~~~~~~~~~~~~~~~aL~~Ek~v~~~l~~l~~~  115 (179)
T d1lb3a_          81 QKPSQDEWGKTQEAMEAALAMEKNLNQALLDLHAL  115 (179)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcccCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99877789999999999999999999999999974

>d1r03a_ a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens), mitocondial isoform [TaxId: 9606]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Human (Homo sapiens), mitocondial isoform [TaxId: 9606]

Probab=100.00  E-value=1.5e-39  Score=227.62  Aligned_cols=115  Identities=53%  Similarity=0.841  Sum_probs=111.6

Q ss_pred             CcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Q psy12315          4 SQVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDV   83 (120)
Q Consensus         4 s~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i   83 (120)
                      |++||||+++|+++||+||+.|+.||++|++||.||+++++++|||++||+.+|.|||+||++|++||++|||.|+++++
T Consensus         1 ~~~r~n~~~e~e~aLN~qi~~El~as~~Yl~ma~~f~~~~~~l~g~a~~f~~~a~EE~~Ha~~l~~yi~~rgg~~~~~~i   80 (171)
T d1r03a_           1 SRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDI   80 (171)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCc
Confidence            78999999999999999999999999999999999998899999999999999999999999999999999999999999


Q ss_pred             CCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         84 KAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        84 ~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ++|..+.|+++.++|+.++++|+.++..|++|++.
T Consensus        81 ~~~~~~~~~s~~~~~~~~l~~E~~vt~~i~~l~~~  115 (171)
T d1r03a_          81 KKPEQDDWESGLHAMECALLLEKNVNQSLLELHAL  115 (171)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99977789999999999999999999999999874

>d1z6oa1 a.25.1.1 (A:13-212) (Apo)ferritin {Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]

Probab=100.00  E-value=1.3e-36  Score=217.71  Aligned_cols=114  Identities=25%  Similarity=0.311  Sum_probs=106.4

Q ss_pred             cccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC
Q psy12315          5 QVRQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVK   84 (120)
Q Consensus         5 ~~~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~   84 (120)
                      ..|.++++.|+.+||+|||.||.+||+|++||+||++++++||||++||+.+|+|||+||++|++||++|||+|.++.|+
T Consensus        16 ~~~~~~~~~~e~~ln~~in~el~aSy~Ylama~~f~~~~~~l~GfakfF~~~S~EE~eHA~kl~~Yl~~RGg~v~~~~i~   95 (200)
T d1z6oa1          16 YGEYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQHS   95 (200)
T ss_dssp             CTTTTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCC
T ss_pred             hhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCceecCccc
Confidence            34777888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCc-----CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         85 APAR-----QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        85 ~p~~-----~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .|..     ..|.+++++|+.||++|+.||++|++||+.
T Consensus        96 ~p~~~~~~~~~~~~~l~~~~~AL~~Ek~Vt~~i~~L~~~  134 (200)
T d1z6oa1          96 TMKTERKNYTAENHELEALAKALDTQKELAERAFYIHRE  134 (200)
T ss_dssp             CSCCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8753     247789999999999999999999999975

>d1z6om1 a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]

Probab=100.00  E-value=2.9e-36  Score=214.47  Aligned_cols=112  Identities=40%  Similarity=0.642  Sum_probs=102.5

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc----ccc
Q psy12315          7 RQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK----LVD   82 (120)
Q Consensus         7 ~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~----~~~   82 (120)
                      ..+++++|+++||+||+.|+.|||+|++||+||++++++||||++||+.+|+|||+||++|++||++|||++.    +.+
T Consensus        14 ~~~~~~~~e~aLn~qIn~El~aSy~Yl~ma~~f~~~~~~l~Gfa~ff~~~s~EE~eHa~kl~~Yl~~RGg~v~~~~~~~~   93 (191)
T d1z6om1          14 WITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSSLLQ   93 (191)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGCC
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccC
Confidence            4457799999999999999999999999999999989999999999999999999999999999999999763    445


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      +.+|....|++++++|+.||++|+.||+.|++||+.
T Consensus        94 ~~~~~~~~~~s~l~a~~~AL~~Ek~vt~~i~~L~~~  129 (191)
T d1z6om1          94 VRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKA  129 (191)
T ss_dssp             CCCCSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            555556799999999999999999999999999873

>d1krqa_ a.25.1.1 (A:) Non-hem ferritin {Campylobacter jejuni [TaxId: 197]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Campylobacter jejuni [TaxId: 197]

Probab=100.00  E-value=2.8e-35  Score=204.78  Aligned_cols=107  Identities=31%  Similarity=0.474  Sum_probs=102.6

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR   88 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~   88 (120)
                      +++++|+++||+||+.|++||++|++||+||+  ++++|||++||+.+|.|||+||++|++||++|||.|++++|++|..
T Consensus         1 M~s~~v~~~LN~qi~~El~as~~Yl~~a~~~~--~~~l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~   78 (165)
T d1krqa_           1 MLSKEVVKLLNEQINKEMYAANLYLSMSSWCY--ENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQ   78 (165)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcchhHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccCccccccc
Confidence            46899999999999999999999999999999  5699999999999999999999999999999999999999999964


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 ~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                       +|+++.++|+.+|++|+.+++.|++|++.
T Consensus        79 -~~~~~~~~l~~al~~E~~v~~~~~~l~~~  107 (165)
T d1krqa_          79 -NFKSLLDVFEKTYEHEQFITKSINTLVEH  107 (165)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             89999999999999999999999999874

>d1vlga_ a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.1e-35  Score=203.08  Aligned_cols=107  Identities=33%  Similarity=0.611  Sum_probs=102.9

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR   88 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~   88 (120)
                      .++++|+++||+||+.||+||++|++||+||+  ++++|||++||+.+|.||++||++|++|+++|||.|++++|++|..
T Consensus         3 ~~s~~v~~~LN~qi~~El~as~~Yl~ma~~~~--~~~l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~   80 (164)
T d1vlga_           3 VISEKVRKALNDQLNREIYSSYLYLSMATYFD--AEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPS   80 (164)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcchhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCCCCCC
Confidence            47899999999999999999999999999998  7899999999999999999999999999999999999999999964


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 ~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                       .|.++.++|+.+|++|+.+++.|+++++.
T Consensus        81 -~~~~~~~~~~~al~~E~~v~~~~~~l~~~  109 (164)
T d1vlga_          81 -NWNGIKDAFEAALKHEEFVTQSIYNILEL  109 (164)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             89999999999999999999999999874

>d1s3qa1 a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=1.2e-34  Score=200.72  Aligned_cols=107  Identities=35%  Similarity=0.631  Sum_probs=102.7

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc
Q psy12315          9 NFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR   88 (120)
Q Consensus         9 ~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~   88 (120)
                      .++++++++||+||+.|++||++|++||.||+  ++++|||++||+++|.|||+||++|++|+++|||.|++++|++|..
T Consensus         1 ~~s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~--~~~l~g~a~~f~~~s~eE~~Ha~~l~~yl~~rgg~~~~~~i~~p~~   78 (162)
T d1s3qa1           1 SISEKMVEALNRQINAEIYSAYLYLSMASYFD--SIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPS   78 (162)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCc
Confidence            36899999999999999999999999999998  7899999999999999999999999999999999999999999964


Q ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 ~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                       +|+++.++|+.+|++|+.+++.|+++++.
T Consensus        79 -~~~~~~~~l~~~l~~E~~v~~~l~~l~~~  107 (162)
T d1s3qa1          79 -EWDSPLAAFEHVYEHEVNVTKRIHELVEM  107 (162)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             89999999999999999999999999864

>d1euma_ a.25.1.1 (A:) Non-hem ferritin {Escherichia coli, FtnA [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Escherichia coli, FtnA [TaxId: 562]

Probab=100.00  E-value=1.5e-34  Score=200.25  Aligned_cols=106  Identities=29%  Similarity=0.500  Sum_probs=101.8

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      ++++|+++||+||+.|++||++|++||.||+  +.++|||++||+.+|.||++||++|++||++|||.|++++|++|.. 
T Consensus         1 l~~~~~~~LN~qi~~El~as~~Yl~~a~~~~--~~~l~g~a~~f~~~a~EE~~HA~~l~~yl~~rgg~~~~~~i~~p~~-   77 (161)
T d1euma_           1 LKPEMIEKLNEQMNLELYSSLLYQQMSAWCS--YHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFA-   77 (161)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCc-
Confidence            4799999999999999999999999999999  5699999999999999999999999999999999999999999964 


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      +|+++.++|+.+|++|+.+++.|++|++.
T Consensus        78 ~~~~~~~~~~~al~~E~~v~~~~~~l~~~  106 (161)
T d1euma_          78 EYSSLDELFQETYKHEQLITQKINELAHA  106 (161)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999874

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.92  E-value=1.8e-24  Score=147.27  Aligned_cols=104  Identities=23%  Similarity=0.162  Sum_probs=99.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQE   90 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~   90 (120)
                      +++++++||++++.|++|+++|+.+|.||+  +++++++++||+.+|.+|+.||.+|++|++.|||.|.+.++++|.  .
T Consensus         4 ~~~ii~~Ln~~l~~E~~A~~~Y~~~a~~~~--~~~~~~la~~f~~~a~eE~~Ha~~l~~~i~~lGg~p~~~~~~~~~--~   79 (154)
T d2fkza1           4 DKIVIQHLNKILGNELIAINQYFLHARMYE--DWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLL--I   79 (154)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCC--C
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccc--c
Confidence            689999999999999999999999999999  889999999999999999999999999999999999999998774  6


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         91 WGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        91 ~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |+++.++++.++++|+.++..++++.+.
T Consensus        80 ~~~~~e~l~~~l~~E~~~~~~y~~~~~~  107 (154)
T d2fkza1          80 GEHTKEMLECDLKLEQAGLPDLKAAIAY  107 (154)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999988763

>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.92  E-value=2.2e-24  Score=148.13  Aligned_cols=105  Identities=21%  Similarity=0.073  Sum_probs=99.3

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .+++++++||++++.|+.++++|+.+|.||+  +++++|++.||+.+|.+|++||.+|++|++.|||.|.+..+.+|.  
T Consensus         3 ~~~kvi~~LN~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~~~~~~~--   78 (160)
T d1jgca_           3 GDAKVIEFLNAALRSELTAISQYWVHFRLQE--DWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLR--   78 (160)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCC--
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccc--
Confidence            3689999999999999999999999999999  889999999999999999999999999999999999999988774  


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .|+++.++|+.++++|+.+++.++++.+.
T Consensus        79 ~~~~~~e~l~~~l~~E~~~~~~~~~~~~~  107 (160)
T d1jgca_          79 IGEGPRETLECDLAGEHDALKLYREARDY  107 (160)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            69999999999999999999999998763

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=7.2e-24  Score=144.79  Aligned_cols=105  Identities=22%  Similarity=0.145  Sum_probs=99.6

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcC
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQ   89 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~   89 (120)
                      .+++++++||++++.|+.|+++|+.+|.||+  +++++++++||+.+|.+|++||.++++||+.+||.|.+.+++.|.  
T Consensus         3 ~~~~ii~~Ln~~l~~E~~A~~~Y~~~a~~~~--~~~~~~la~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~~~~~~~--   78 (158)
T d2htna1           3 GDTKVINYLNKLLGNELVAINQYFLHARMFK--NWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLN--   78 (158)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCC--
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccc--
Confidence            4689999999999999999999999999999  889999999999999999999999999999999999999999884  


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         90 EWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        90 ~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .|.++.++++.++..|+.++..++++++.
T Consensus        79 ~~~~~~~~l~~~~~~e~~~~~~~~~~~~~  107 (158)
T d2htna1          79 IGEDVEEMLRSDLALELDGAKNLREAIGY  107 (158)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999988753

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

Probab=99.89  E-value=5.3e-23  Score=142.12  Aligned_cols=108  Identities=17%  Similarity=0.176  Sum_probs=101.4

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC
Q psy12315          7 RQNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAP   86 (120)
Q Consensus         7 ~~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p   86 (120)
                      |++-.+++++.||++++.|+.++++|+.++.+|+  +++++|++.||+++|.+|+.||.+|++||+.+||.|.+..++.|
T Consensus         2 ~~~~~~~ii~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~~~~~~   79 (169)
T d1nf4a_           2 REDRKAKVIEVLNKARAMELHAIHQYMNQHYSLD--DMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKV   79 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCC
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcccccccc
Confidence            4556789999999999999999999999999999  88999999999999999999999999999999999999999988


Q ss_pred             CcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         87 ARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        87 ~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .  .++++.++++.+++.|+.++..++++++.
T Consensus        80 ~--~~~~~~e~l~~~l~~E~~~~~~y~~~~~~  109 (169)
T d1nf4a_          80 V--TGQAVPVIYESDADQEDATIEAYSQFLKV  109 (169)
T ss_dssp             C--CSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c--CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5  58899999999999999999999988753

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=99.85  E-value=7.6e-21  Score=126.72  Aligned_cols=101  Identities=16%  Similarity=0.099  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCccCC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGT   93 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~~~   93 (120)
                      .++.||++++.|+.|+++|+++|.+|+  ++|+|+++++|+.+|.+|+.||.+|++|+.++||.|.++.++.|.  .+.+
T Consensus         7 t~e~L~~a~~~E~~A~~~Yl~~A~~~~--~~g~~~ia~~f~~~A~eE~~HA~~l~~~l~~lgg~p~~~~~~~~~--~~~~   82 (135)
T d1yuza1           7 TLENLKAAIAGETGAHAKYTAFAKAAR--EQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPS--AYSC   82 (135)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCC--CC--CCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh--HCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCc--CCch
Confidence            578899999999999999999999999  789999999999999999999999999999999999999998884  4667


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         94 TEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        94 ~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ....+...+..|..+++.+.++.+.
T Consensus        83 ~~~L~~~~~~ee~e~~~~Y~~~~~~  107 (135)
T d1yuza1          83 DLNLISGANGEIYETSDMYPAFIRK  107 (135)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            7888888888888999988877653

>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=99.77  E-value=1e-18  Score=117.57  Aligned_cols=102  Identities=20%  Similarity=0.162  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCcc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEW   91 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~   91 (120)
                      .++++.|++.+..|+.|+++|+++|.+|+  ++|+++++++|+..|.+|+.||.++++++.++||.|....  .| ...|
T Consensus         6 t~t~~~L~~a~~~E~~A~~~Y~~~A~~a~--~~g~~~ia~~f~~~A~eE~~HA~~l~~~l~~lg~~p~~~~--~~-~~~~   80 (146)
T d1lkoa1           6 SRTEKNILTAFAGESQARNRYNYFGGQAK--KDGFVQISDIFAETADQEREHAKRLFKFLEGGDLEIVAAF--PA-GIIA   80 (146)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCCCCC--CC-CCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCcCCCC--Cc-cccC
Confidence            46788999999999999999999999999  7899999999999999999999999999999999997543  23 3368


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         92 GTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        92 ~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .++.++++.++..|.+++..+.++.+.
T Consensus        81 ~~~~~l~~~~~~~e~e~~~~y~~~~~~  107 (146)
T d1lkoa1          81 DTHANLIASAAGEHHEYTEMYPSFARI  107 (146)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999877653

>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical rubrerythrin
species: Archaeon Sulfolobus tokodaii [TaxId: 111955]

Probab=99.76  E-value=6e-18  Score=112.98  Aligned_cols=99  Identities=21%  Similarity=0.232  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCcc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEW   91 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~   91 (120)
                      .++++.||+.++.|+.|+++|+.+|.||+  +.|+|++|++|+.+|.+|+.||.++++||.++||.|...+.+.|     
T Consensus         5 t~t~~~L~~a~~~E~~A~~~Y~~~a~~a~--~~g~~~iA~~f~~~A~eE~~HA~~~~~~i~~lg~~p~~~~~~~~-----   77 (141)
T d1j30a_           5 TKTAENLKQGFIGESMANRRYLYFAKRAD--EEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDKPIG-----   77 (141)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTTSCBCS-----
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcCcC-----
Confidence            46789999999999999999999999999  67999999999999999999999999999999999876544333     


Q ss_pred             CCHHHHHHHHHHHH-HHHHHHHHHHHHh
Q psy12315         92 GTTEEAFSHALQLE-KDVNQVIIYFFTS  118 (120)
Q Consensus        92 ~~~~~~l~~aL~~E-k~v~~~l~~l~~~  118 (120)
                       +..+.+..++..| +.++..+.++.+.
T Consensus        78 -~~~~~l~~~~~~e~~e~~~~y~~~~~~  104 (141)
T d1j30a_          78 -TLEQMIESAIAGETYEWTQMYPGFAKV  104 (141)
T ss_dssp             -SHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             -chhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence             3445555555555 5688888776653

>d1nnqa1 a.25.1.1 (A:2-134) Rubrerythrin, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.27  E-value=1.8e-11  Score=80.90  Aligned_cols=66  Identities=24%  Similarity=0.273  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK   79 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~   79 (120)
                      .+.++.||+.+.-|+.|+.+|+.+|..++  ++|+|.+|+.|+..|.+|+.||..+++++...|++|.
T Consensus         5 ~~t~~~L~~A~~gE~~A~~~Y~~~A~~a~--~~G~~~lA~~f~~~A~eE~~HA~~~~~~i~~l~~~~~   70 (133)
T d1nnqa1           5 TMTKKFLEEAFAGESMAHMRYLIFAEKAE--QEGFPNIAKLFRAIAYAEFVHAKNHFIALGKLGKTPE   70 (133)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence            46788999999999999999999999999  8899999999999999999999999999988777664

>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: AMB4284-like
domain: Uncharacterized protein AMB4284 homologue
species: Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]

Probab=99.21  E-value=1.7e-10  Score=76.13  Aligned_cols=104  Identities=12%  Similarity=-0.046  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCC-------C
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKA-------P   86 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~-------p   86 (120)
                      +.++|+..|..|..+...|..+|..+.  +.+.+.++++|...+.+|++|+..|.+.+..+|+.+.......       +
T Consensus         3 ~~e~L~~Ai~~E~~a~~~Y~~~a~~~~--~~~~~~~~~~f~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
T d2oh3a1           3 LAEFLAHAIALETEAAERYVELADMME--AHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVG   80 (152)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhccccchhHH
Confidence            578999999999999999999999999  6689999999999999999999999999999999765432111       0


Q ss_pred             C---cCccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         87 A---RQEWGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        87 ~---~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                      .   .....+..++++.++.+|+.....+..+.+.+
T Consensus        81 ~~~~~~~~~~~~~~l~~Al~~E~~a~~~Y~~~a~~~  116 (152)
T d2oh3a1          81 DENDIHYLMTPYHALRYARDNEIRGMEYYKEAAANS  116 (152)
T ss_dssp             CC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            0   12234789999999999999999888887653

>d1o9ra_ a.25.1.1 (A:) Dodecameric ferritin homolog {Agrobacterium tumefaciens, Dps [TaxId: 358]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Agrobacterium tumefaciens, Dps [TaxId: 358]

Probab=98.99  E-value=1.8e-08  Score=67.82  Aligned_cols=105  Identities=10%  Similarity=0.091  Sum_probs=91.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--------ccc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK--------LVD   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~--------~~~   82 (120)
                      ..++.+.||+.+...+.....|....-+..  +.++..+..+|.+++++.++|++.+.+++...||.|.        ...
T Consensus        15 ~~~~~~~Ln~~La~~~~l~~k~~~~HWnv~--G~~F~~lH~~~~~~~~~~~~~~D~iAERi~~LG~~p~~~~~~~~~~s~   92 (162)
T d1o9ra_          15 KSTVIGILNESLASVIDLALVTKQAHWNLK--GPQFIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSSTTK   92 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhcee--CCChHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHhcc
Confidence            347888999999999888888887777777  8899999999999999999999999999999999994        456


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |+.+. .++.+..++++..++.+..+...++++.+.
T Consensus        93 i~~~~-~~~~~~~e~l~~~l~~~~~~~~~~~~~i~~  127 (162)
T d1o9ra_          93 LKAYP-TDIYKIHDHLDALIERYGEVANMIRKAIDD  127 (162)
T ss_dssp             SCCCC-SSCCBHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66653 356789999999999999999999998764

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.88  E-value=3.1e-08  Score=65.03  Aligned_cols=101  Identities=16%  Similarity=0.146  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCc----
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPAR----   88 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~----   88 (120)
                      .+.+.|+..+..|..+...|..++..+.  +   |++++.|...+.+|.+|+..|.+++..+||.+..........    
T Consensus        11 ~l~e~l~~ai~~E~~a~~~Y~~~a~~~~--~---~~~~~~f~~la~eE~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (158)
T d2fzfa1          11 SLEELLGMAIKAEIGAREFYKSLAEKIK--I---EALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQ   85 (158)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHSCC--C---TTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCCSCCBSCCCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccchhhhhhhhhh
Confidence            3578999999999999999999999887  2   679999999999999999999999999999875433221100    


Q ss_pred             ------CccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         89 ------QEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        89 ------~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                            ....+..++++.++..|......+..+.+.
T Consensus        86 ~~~~~~~~~~~~~~~l~~a~~~E~~a~~~Y~~la~~  121 (158)
T d2fzfa1          86 PVARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEM  121 (158)
T ss_dssp             CCCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                  011347889999999999999988887654

>d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Rv2844-like
domain: Hypothetical protein Rv2844
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.87  E-value=7.1e-08  Score=63.40  Aligned_cols=99  Identities=17%  Similarity=0.178  Sum_probs=82.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCcCccCCH
Q psy12315         15 EEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPARQEWGTT   94 (120)
Q Consensus        15 ~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~~~~~~~~   94 (120)
                      ..+||..+..|+.+.|.|-..+.+++      ++....|.....+|+.|+..|.+.+..+||.|.............++.
T Consensus         7 ~~~L~~AL~~E~aaiy~Y~~a~~~~~------~~~~~~~~~~~~~e~~H~~~L~~~i~~lgg~p~~~~~~~~~~~~~td~   80 (142)
T d2ib0a1           7 NAALCDALAVEHATIYGYGIVSALSP------PGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSA   80 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSC------GGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCSSCCCSH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccCCCCCCH
Confidence            47899999999999999977776665      357888999999999999999999999999987654433322356789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         95 EEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        95 ~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                      .++++.++..|+.....++.+...+
T Consensus        81 ~~~l~~a~~~E~~a~~~Y~~~~~~~  105 (142)
T d2ib0a1          81 ADAARLAVRMENDGATAWRAVVEHA  105 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999998876643

>d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Bacillus anthracis, Dlp-2 [TaxId: 1392]

Probab=98.75  E-value=3e-07  Score=60.50  Aligned_cols=104  Identities=12%  Similarity=-0.030  Sum_probs=90.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------cc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL--------VD   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~--------~~   82 (120)
                      .+++++.||..+.........|....-...  +.++..+..+|.+++.+.++|+..+++++...||.|..        ..
T Consensus         3 ~~~~~~~Ln~~lA~~~~l~~k~~~~HWnv~--G~~F~~lH~~~~e~~~~~~~~~D~iAERi~~lgg~p~~~~~~~~~~s~   80 (146)
T d1jiga_           3 KTNVVEVLNKQVANWNVLYVKLHNYHWYVT--GPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSS   80 (146)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhee--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCccCHHHHhhcCc
Confidence            467899999999999999999999887788  88999999999999999999999999999999999953        34


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ++.+.  ...++.++++..++.+..+...++++.+.
T Consensus        81 i~e~~--~~~~~~~~l~~ll~~~~~~~~~~r~~i~~  114 (146)
T d1jiga_          81 VNEGT--SKESAEEMVQTLVNDYSALIQELKEGMEV  114 (146)
T ss_dssp             SCCCC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             Ccccc--CCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44432  34589999999999999999999987653

>d1tjoa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Archaeon Halobacterium salinarum [TaxId: 2242]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Archaeon Halobacterium salinarum [TaxId: 2242]

Probab=98.75  E-value=2.4e-07  Score=63.18  Aligned_cols=105  Identities=9%  Similarity=0.088  Sum_probs=91.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--------ccc
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK--------LVD   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~--------~~~   82 (120)
                      .+++++.||..+..++.....|..+.-...  +.++..+..+|.+++.+..+|+..+.++|...||.|.        ...
T Consensus        26 ~~~~i~~Ln~~LA~~~~l~~k~~~~HWnv~--G~~F~~lH~~fee~y~~~~~~~D~iAERI~~LGg~p~~~~~~~~~~s~  103 (180)
T d1tjoa_          26 AEQCVDALNADLANVYVLYHQLKKHHWNVE--GAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEAS  103 (180)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhheeee--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcCHHHHHHHcC
Confidence            457899999999999999999999988888  8899999999999999999999999999999999994        344


Q ss_pred             cCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         83 VKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        83 i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      ++.+. .++.+..++++..++.+..+...++++.+.
T Consensus       104 i~e~~-~~~~~~~eml~~ll~~~~~~i~~~~~~i~~  138 (180)
T d1tjoa_         104 VDVED-EDVYDIRTSLANDMAIYGDIIEATREHTEL  138 (180)
T ss_dssp             SCCCC-SSBCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccc-cccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44432 356789999999999999999999888754

>d1umna_ a.25.1.1 (A:) Dodecameric ferritin homolog {Streptococcus suis [TaxId: 1307]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Streptococcus suis [TaxId: 1307]

Probab=98.73  E-value=4e-07  Score=60.25  Aligned_cols=103  Identities=11%  Similarity=0.014  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------ccC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------DVK   84 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~i~   84 (120)
                      ++...||..+.........|..+.-...  +.++.++..+|.+++.++++|++.+.++|...||.|...        .++
T Consensus         3 ~~~~~Ln~~la~~~~l~~~~~~~HWnv~--G~~F~~lH~~f~~~~~e~~~~~D~lAERi~~lGg~p~~~~~~~~~~s~i~   80 (151)
T d1umna_           3 DSKAVLNQAVADLSVAHSILHQVHWYMR--GRGFMIWHPKMDEYMEEIDGYLDEMSERLITLGGAPFSTLKEFSENSQLK   80 (151)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhccee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHccCc
Confidence            5678899999999999999999887777  889999999999999999999999999999999998543        334


Q ss_pred             CCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         85 APARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        85 ~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      ....+...+..++++..++.++.+...++++.+
T Consensus        81 e~~~~~~~~~~~ml~~~~~~~~~~~~~~~~~~~  113 (151)
T d1umna_          81 EVLGDYNVTIEEQLARVVEVFRYLAALFQKGFD  113 (151)
T ss_dssp             CCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            322223457889999999999999999988765

>d1ji5a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-1 [TaxId: 1392]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Bacillus anthracis, Dlp-1 [TaxId: 1392]

Probab=98.71  E-value=3.2e-07  Score=60.16  Aligned_cols=101  Identities=12%  Similarity=0.034  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--------cccccC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTL--------KLVDVK   84 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v--------~~~~i~   84 (120)
                      ++++.||+.+.........|....-...  +.++..+..+|.+++++.++|+..+.+++...||.|        ....++
T Consensus         1 ~~~e~Ln~~lA~~~~l~~k~~~~HWnv~--G~~F~~~H~~~~e~y~~~~~~~D~lAERi~~Lgg~p~~~~~~~~~~s~i~   78 (142)
T d1ji5a_           1 QVIEVLNKQVADWSVLFTKLHNFHWYVK--GPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQ   78 (142)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcccc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcCHHHHHhhCcCc
Confidence            3678999999999999999988877777  889999999999999999999999999999999999        355666


Q ss_pred             CCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         85 APARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        85 ~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      .+.. . .+..++++..++.+..+...++++.+
T Consensus        79 e~~~-~-~~~~~ml~~~~~~~~~~~~~~~~~~~  109 (142)
T d1ji5a_          79 EAAY-G-ETAEGMVEAIMKDYEMMLVELKKGME  109 (142)
T ss_dssp             CCCT-T-CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5532 3 36889999999999999999988865

>d2fjca1 a.25.1.1 (A:27-177) Dodecameric ferritin homolog {Treponema pallidum, TpF1 [TaxId: 160]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Treponema pallidum, TpF1 [TaxId: 160]

Probab=98.62  E-value=8.2e-07  Score=58.61  Aligned_cols=103  Identities=8%  Similarity=-0.043  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------ccc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL--------VDV   83 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~--------~~i   83 (120)
                      ..+.+.||+.+.........|..+.-...  +.++..+..+|.+++.+..+|+..+.++|...||.|..        ..+
T Consensus         7 ~~~~~~Ln~~lA~~~~l~~k~~~~HWnv~--G~~F~~lH~~f~~~y~~~~~~~D~iAERi~~Lgg~p~~t~~~~~~~s~i   84 (151)
T d2fjca1           7 AAICEQLRQHVADLGVLYIKLHNYHWHIY--GIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSGI   84 (151)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhheeee--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHHHhCCC
Confidence            45788999999999999999999988888  88999999999999999999999999999999999964        344


Q ss_pred             CCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         84 KAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        84 ~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      +.+.. ...+..++++..++.+..+...++++.+
T Consensus        85 ~e~~~-~~~~~~~~l~~l~~~~~~~~~~~~~~~~  117 (151)
T d2fjca1          85 AEETE-KEITIVSALARVKRDFEYLSTRFSQTQV  117 (151)
T ss_dssp             CCCCC-CSEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             Ccccc-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44422 4557899999999999999998888765

>d1n1qa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus brevis, Dps [TaxId: 1393]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Bacillus brevis, Dps [TaxId: 1393]

Probab=98.58  E-value=2e-06  Score=56.57  Aligned_cols=106  Identities=12%  Similarity=0.047  Sum_probs=89.6

Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-------
Q psy12315          8 QNFHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL-------   80 (120)
Q Consensus         8 ~~~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~-------   80 (120)
                      .+..+.+...||+.+.....-...|..+.-...  +.++.++..+|.+++.+..+|++.+.+++...||.|..       
T Consensus         3 ~~~~~~~~~~Ln~~lA~~~~l~~~~~~~HWnv~--G~~F~~lH~~~ee~y~e~~~~~D~iAERi~~Lgg~p~~~~~~~~~   80 (149)
T d1n1qa_           3 TSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVN--GPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLE   80 (149)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCccHHHHHh
Confidence            445678888999999999888888888777777  88999999999999999999999999999999999954       


Q ss_pred             -cccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         81 -VDVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        81 -~~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       ..++.+.  ...+..++++..++.+..+...++++.+
T Consensus        81 ~s~i~e~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~~  116 (149)
T d1n1qa_          81 EASIKEAT--GGESAAEMVSSVVNDFVDLVGELKVARD  116 (149)
T ss_dssp             HCCSCCCC--SCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCcccc--CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             3444442  3457899999999999999999888765

>d1dpsa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Escherichia coli, Dps [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Escherichia coli, Dps [TaxId: 562]

Probab=98.58  E-value=1.7e-06  Score=57.78  Aligned_cols=106  Identities=9%  Similarity=0.006  Sum_probs=87.7

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------c
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL--------V   81 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~--------~   81 (120)
                      -.+++.++||+.+.....-...|....-...  +.++..+..+|.+++.+..+|+..+.++|...||.|..        .
T Consensus        17 ~~~~~~~~L~~~la~~~~L~~~~~~~HWnv~--G~~F~~lH~~fee~y~e~~~~~D~iAERI~~Lgg~p~~~~~~~~~~s   94 (159)
T d1dpsa_          17 EKKATVELLNRQVIQFIDLSLITKQAHWNMR--GANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT   94 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccee--CCCHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHhhC
Confidence            4457888999999999888888888777777  88999999999999999999999999999999999932        3


Q ss_pred             ccCCCCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         82 DVKAPARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        82 ~i~~p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      .++.+ .....+..++++..++.++.+...++++.+.
T Consensus        95 ~i~e~-~~~~~~~~~~l~~l~~~~~~~i~~~r~~a~~  130 (159)
T d1dpsa_          95 PLKSY-PLDIHNVQDHLKELADRYAIVANDVRKAIGE  130 (159)
T ss_dssp             CSCCC-CSSCCBHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCC-CCccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333 2246679999999999999999888877543

>d1ji4a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Helicobacter pylori, Nap [TaxId: 210]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Helicobacter pylori, Nap [TaxId: 210]

Probab=98.49  E-value=1.9e-06  Score=56.44  Aligned_cols=102  Identities=11%  Similarity=0.016  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------cccCC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKL--------VDVKA   85 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~--------~~i~~   85 (120)
                      ..+.||..+.....-...+..+.-...  +.+...+..+|.+++.+..+|+..+.++|...||.|..        ..++.
T Consensus         3 ~~~~L~~~lA~~~~l~~~~~~~HWnv~--G~~F~~lH~~f~e~y~~~~~~~D~iAERi~~LG~~p~~~~~~~~~~s~i~~   80 (144)
T d1ji4a_           3 TFEILKHLQADAIVLFMKVHNFHWNVK--GTDFFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKE   80 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHhcCCcc
Confidence            467889988888888888877776666  88999999999999999999999999999999999953        34454


Q ss_pred             CCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         86 PARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        86 p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      |.. .+.++.++++..++.++.+...++++.+.
T Consensus        81 ~~~-~~~~~~~ml~~l~~~~~~~~~~~~~~~~~  112 (144)
T d1ji4a_          81 ETK-TSFHSKDIFKEILEDYKYLEKEFKELSNT  112 (144)
T ss_dssp             CCC-CCEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            432 55679999999999999999999988764

>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein TM1526
species: Thermotoga maritima [TaxId: 2336]

Probab=98.46  E-value=3.3e-06  Score=54.71  Aligned_cols=100  Identities=24%  Similarity=0.213  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCC------
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKAPA------   87 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~p~------   87 (120)
                      +.+.|+..|..|..+...|..++..++      |.+...|...+.+|+.|+..|.+.+...|+.+.......+.      
T Consensus         7 ~~e~l~~Ai~~E~~~~~~Y~~~a~~~~------~~~~~~f~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
T d1vjxa_           7 VSDILTVAIRLEEEGERFYRELSEHFN------GEIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFP   80 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCC------SHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTCBCCSBCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHhhhhhhh
Confidence            567899999999999999999987664      45889999999999999999999999999865432221110      


Q ss_pred             ------cCccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         88 ------RQEWGTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        88 ------~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                            .....++.++++.++..|+.....+..+...+
T Consensus        81 ~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~Y~~l~~~~  118 (149)
T d1vjxa_          81 DTSEILRRKDLTLKEVLDIAISVEKDSIILYYELKDGL  118 (149)
T ss_dssp             CCTTGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence                  12345789999999999999999988887643

>d2bk6a1 a.25.1.1 (A:7-156) Dodecameric ferritin homolog {Listeria innocua [TaxId: 1642]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Listeria innocua [TaxId: 1642]

Probab=98.24  E-value=3.2e-05  Score=50.57  Aligned_cols=102  Identities=11%  Similarity=-0.014  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--------ccCC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLV--------DVKA   85 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~--------~i~~   85 (120)
                      +.+.||..+..-..-...|..+.-...  +.+...+..+|.++..+..+|+..+.+++...||.|...        .|+.
T Consensus         3 ~~e~L~~~lA~~~~l~~k~~~~HWnv~--G~~F~~lH~~~e~~y~~~~~~~D~iAERi~~Lg~~p~~~~~~~~~~s~i~e   80 (150)
T d2bk6a1           3 TKEFLNHQVANLNVFTVKIHQIGWYMR--GHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEE   80 (150)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHccCcc
Confidence            467888888888777777776665566  889999999999999999999999999999999998643        3333


Q ss_pred             CCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         86 PARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        86 p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                      .+.+...++.++++..++.+..+...+++..+
T Consensus        81 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~  112 (150)
T d2bk6a1          81 APYTKPKTMDQLMEDLVGTLELLRDEYKQGIE  112 (150)
T ss_dssp             CCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22334567899999999999999888887654

>d2yw6a1 a.25.1.1 (A:17-157) Dodecameric ferritin homolog {Mycobacterium smegmatis [TaxId: 1772]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Mycobacterium smegmatis [TaxId: 1772]

Probab=98.11  E-value=5.6e-05  Score=48.90  Aligned_cols=102  Identities=9%  Similarity=-0.033  Sum_probs=80.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--------ccccCC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK--------LVDVKA   85 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~--------~~~i~~   85 (120)
                      +.+.||+.+.....-...+....-...  +.++.++..+|.++..+..+|+..+.+++...||.|.        ...++.
T Consensus         1 v~~~L~~~La~~~~L~~~~~~~HWnv~--G~~F~~~H~~fee~y~~~~~~~D~iAERi~~Lg~~p~~~~~~~~~~s~~~~   78 (141)
T d2yw6a1           1 VADLLQKQLSTYNDLHLTLKHVHWNVV--GPNFIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRTWDD   78 (141)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcccccc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHcCCCc
Confidence            456788888887666666655544444  7889999999999999999999999999999999984        234443


Q ss_pred             CCcCccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         86 PARQEWGTTEEAFSHALQLEKDVNQVIIYFFTS  118 (120)
Q Consensus        86 p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~~  118 (120)
                      +. ..+.++.++++..++.+..+...++++.+.
T Consensus        79 ~~-~~~~~~~~~l~~l~~~~~~~~~~~r~~~~~  110 (141)
T d2yw6a1          79 YS-VERDTVQAHLAALDLVYNGVIEDTRKSIEK  110 (141)
T ss_dssp             CC-CCSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            32 246688999999999999999988887653

>d1zpya1 a.25.1.5 (A:4-94) Hypothetical protein NE0167 {Nitrosomonas europaea [TaxId: 915]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: half-ferritin
domain: Hypothetical protein NE0167
species: Nitrosomonas europaea [TaxId: 915]

Probab=97.28  E-value=0.0013  Score=39.66  Aligned_cols=57  Identities=23%  Similarity=0.309  Sum_probs=49.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRG   75 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rG   75 (120)
                      ++..++. .+-.|+.|.+.|..++..++  |   +.+.+.|..-++||.+|+-.+++.+..++
T Consensus        16 d~~Rai~-sli~EleAI~~Y~q~a~~t~--d---~~~k~Vl~hia~EEkeH~g~~LelLrr~D   72 (91)
T d1zpya1          16 DMHRAII-SLREELEAVDLYNQRVNACK--D---KELKAILAHNRDEEKEHAAMLLEWIRRCD   72 (91)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHhCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            3455565 45589999999999999999  3   57889999999999999999999998876

>d1zs3a1 a.25.1.1 (A:3-173) Dodecameric ferritin homolog {Lactococcus lactis, DpsB [TaxId: 1358]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Lactococcus lactis, DpsB [TaxId: 1358]

Probab=95.57  E-value=0.16  Score=33.41  Aligned_cols=99  Identities=10%  Similarity=0.122  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--------ccccCC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK--------LVDVKA   85 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~--------~~~i~~   85 (120)
                      .-..||+.+..-+.-...+.. ..|.=+   | |.+..+|.++.++..++...+.+++...||.|.        ...|+.
T Consensus        25 a~amLn~lLAn~~vl~~K~~~-~HWnv~---G-~~lH~~fee~y~~~~~~~D~iAEri~~lG~~p~~t~~e~~e~s~i~e   99 (171)
T d1zs3a1          25 AGAMLGHVLSNLFIENIRLTQ-AGIYAK---S-PVKCEYLREIAQREVEYFFKISDLLLDENEIVPSTTEEFLKYHKFIT   99 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HHHHCS---S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHc-CceeeE---C-hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCccHHHHHHHccCcc
Confidence            334577776655544444433 344442   3 469999999999999999999999999999984        344443


Q ss_pred             -CCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         86 -PARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        86 -p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       +....+-+..++++..++--+.+...+++..+
T Consensus       100 ~~~~~~~~s~~eml~~Lv~d~~~~~~~~~~~i~  132 (171)
T d1zs3a1         100 EDPKAKYWTDEDLLESFIVDFQAQNMFITRAIK  132 (171)
T ss_dssp             CCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             22224567899999999888888888877653

>d2cwla1 a.25.1.3 (A:1-299) Manganese catalase (T-catalase) {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Manganese catalase (T-catalase)
domain: Manganese catalase (T-catalase)
species: Thermus thermophilus [TaxId: 274]

Probab=95.52  E-value=0.17  Score=36.28  Aligned_cols=108  Identities=15%  Similarity=0.123  Sum_probs=79.2

Q ss_pred             cHHHHHHHHHHH---HHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh-cCCccccccc---
Q psy12315         11 HAETEEKINKQI---NLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK-RGGTLKLVDV---   83 (120)
Q Consensus        11 ~~~~~~~Ln~qi---~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~-rGg~v~~~~i---   83 (120)
                      ++....+|.+|+   .-|+.++.+|+..+.-|... ..++-+...+..-+-||+.|.+.+-.-+.. .+|.+.-..-   
T Consensus        19 dP~~A~~l~e~~GG~~GEmsa~mqYl~Q~~~~~~~-~~~~~~~dll~dIatEEl~HlEmvat~I~~Ll~~~p~~~~~~~~   97 (299)
T d2cwla1          19 DPNAAAAVQALLGGRFGEMSTLMNYMYQSFNFRGK-KALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGV   97 (299)
T ss_dssp             CHHHHHHHGGGTTSTTSHHHHHHHHHHHHHHCSCT-TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCSCCCCC
T ss_pred             CHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCCCc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHhhcc
Confidence            456677777776   46999999999999988743 256679999999999999999999988866 4554321100   


Q ss_pred             ---CC----------------------CCc---Ccc--------CCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         84 ---KA----------------------PAR---QEW--------GTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        84 ---~~----------------------p~~---~~~--------~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                         ..                      |..   .-|        +++..-|...+..|+.....+.+|++-+
T Consensus        98 dp~~~~~~~~~~~~n~~h~i~~g~g~~~~ds~G~pWt~~Yv~~sGnl~aDL~~Ni~aE~~Ar~~y~rl~~~t  169 (299)
T d2cwla1          98 DPESAPLGFAKDVRNAAHFIAGGANSLVMGAMGEHWNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEMT  169 (299)
T ss_dssp             CGGGCTTGGGGSSSCSHHHHTSSSSCCSBCTTSCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CchhhHHHhhhccCChhhhhccCCCCCccCCCCCcCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence               00                      000   014        3689999999999999998888887643

>d1jkva_ a.25.1.3 (A:) Manganese catalase (T-catalase) {Lactobacillus plantarum [TaxId: 1590]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Manganese catalase (T-catalase)
domain: Manganese catalase (T-catalase)
species: Lactobacillus plantarum [TaxId: 1590]

Probab=95.22  E-value=0.24  Score=34.90  Aligned_cols=105  Identities=10%  Similarity=0.102  Sum_probs=76.7

Q ss_pred             cHHHHHHHHHHHH---HHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-----
Q psy12315         11 HAETEEKINKQIN---LELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVD-----   82 (120)
Q Consensus        11 ~~~~~~~Ln~qi~---~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~-----   82 (120)
                      ++....+|.+|+.   -||.++.+|+..+.-|.  +  -+.+...+..-+-||+.|.+.+..-+.++...+....     
T Consensus        18 dP~~A~~L~e~~GG~~GElsa~~qYl~Q~~~~~--~--~~~~~dll~dIatEEl~HlEmvat~I~~Ll~~~~~~~~~~~~   93 (266)
T d1jkva_          18 DPIMARRLQESLGGQWGETTGMMSYLSQGWAST--G--AEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKR   93 (266)
T ss_dssp             CHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHCC--S--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHHH
T ss_pred             CHHHHHHHHHHhCCCchHHHHHHHHHHHHhcCC--C--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhhccc
Confidence            4556667777764   69999999999997776  2  3468899999999999999999888877643222110     


Q ss_pred             --------------------c-CCCCc---Ccc--------CCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12315         83 --------------------V-KAPAR---QEW--------GTTEEAFSHALQLEKDVNQVIIYFFTSL  119 (120)
Q Consensus        83 --------------------i-~~p~~---~~~--------~~~~~~l~~aL~~Ek~v~~~l~~l~~~~  119 (120)
                                          . ..|..   .-|        +++...|...++.|+.....+.+|++.+
T Consensus        94 ~~~~~~~~~G~~p~~~~~~g~g~~~~ds~G~pWt~~Yv~~~Gnl~~DL~~NiaAE~~Ar~~Y~rl~~~t  162 (266)
T d1jkva_          94 DPSLATTMAGMDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSMT  162 (266)
T ss_dssp             CTTHHHHHHHSCHHHHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             chhHHHHhcCCCcceeeeccCcccccCCCCCCCCccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                                0 00100   124        4689999999999999999999988754

>d1zuja1 a.25.1.1 (A:6-173) Dodecameric ferritin homolog {Lactococcus lactis, DpsA [TaxId: 1358]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Lactococcus lactis, DpsA [TaxId: 1358]

Probab=95.01  E-value=0.25  Score=32.29  Aligned_cols=99  Identities=9%  Similarity=0.029  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--------ccccCC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLK--------LVDVKA   85 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~--------~~~i~~   85 (120)
                      .-..||+.+..-+.-...+..+.-+-.  +   |+|..+|.++..+..++...+.+++...|+.|.        ...|+.
T Consensus        22 agamln~vLAn~~vl~~K~~~~HWnV~--G---~~FH~~fee~y~~~~~~~D~iAEri~~lG~~~~~t~~e~~~~s~i~E   96 (168)
T d1zuja1          22 AGAMLSHVLSNIFYEKISLMQAGLYAK--S---ANYRIKFREIALKEDEWFYLISEQLLDENELVPTTLDEFVSNHKFIE   96 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCS--S---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHcceeeee--C---cHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHccCcc
Confidence            445588887766655555554444434  3   578999999999999999999999999999873        234432


Q ss_pred             -CCcCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         86 -PARQEWGTTEEAFSHALQLEKDVNQVIIYFFT  117 (120)
Q Consensus        86 -p~~~~~~~~~~~l~~aL~~Ek~v~~~l~~l~~  117 (120)
                       +....+-+..++++..++--+.+...+++..+
T Consensus        97 ~~~~~~~~s~~~ml~~li~d~~~~~~~~~~~i~  129 (168)
T d1zuja1          97 NDPKAKYWTDEALIENFINDFQNQNLFIGRAIK  129 (168)
T ss_dssp             CCTTGGGSCHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred             cccccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             21223557999999999888888887776543

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=94.76  E-value=0.039  Score=34.39  Aligned_cols=53  Identities=17%  Similarity=0.070  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHH
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLI   68 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li   68 (120)
                      ...++......|..+...|--+...++  ..|-+..+.+|.....+|..|+++|+
T Consensus        83 ~~~L~~~~~~ee~e~~~~Y~~~~~~A~--~~~d~~~~~~f~~i~~~E~~H~e~F~  135 (135)
T d1yuza1          83 DLNLISGANGEIYETSDMYPAFIRKAQ--EEGNSKAVHVFTRAKLAESVHAERYL  135 (135)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            345555566667889999999999999  45889999999999999999999985

>d2itba1 a.25.1.7 (A:3-201) Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188 {Pseudomonas putida [TaxId: 303]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: MiaE-like
domain: Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188
species: Pseudomonas putida [TaxId: 303]

Probab=94.64  E-value=0.17  Score=34.23  Aligned_cols=66  Identities=23%  Similarity=0.319  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCC
Q psy12315         14 TEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKRGGTLKLVDVKA   85 (120)
Q Consensus        14 ~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~rGg~v~~~~i~~   85 (120)
                      ....|.++.+-|-.|+..-++|-+-|-    ..+.+..-+-..+.||+.|-++.++-|.+||...  ..+.+
T Consensus        25 ~~~~L~DHA~cEkKAA~~Alsli~rYp----~~~~Lv~~m~~La~EEL~HF~qV~~im~~Rgi~l--~~~~~   90 (199)
T d2itba1          25 QETLLIDHKNCEFKAASTALSLIAKYN----THLDLINMMSRLAREELVHHEQVLRLMKRRGVPL--RPVSA   90 (199)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTT----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CCCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--CCCCc
Confidence            456899999999999999988876666    3788999999999999999999999999999654  44443

>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: AMB4284-like
domain: Uncharacterized protein AMB4284 homologue
species: Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]

Probab=94.34  E-value=0.17  Score=31.24  Aligned_cols=58  Identities=19%  Similarity=0.196  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNKR   74 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~r   74 (120)
                      ....++|...+..|-.+...|..++..+.  |   |.+.+.|...+.+|..|+..|-+++...
T Consensus        89 ~~~~~~l~~Al~~E~~a~~~Y~~~a~~~~--d---~~~r~~~~~l~~~E~~H~~~l~~~l~~~  146 (152)
T d2oh3a1          89 MTPYHALRYARDNEIRGMEYYKEAAANSA--D---PEVKRLGADFAAEEAEHVVALDKWIEKT  146 (152)
T ss_dssp             GSHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHcC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            35678899999999999999999998877  3   6789999999999999999998888766

>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein TM1526
species: Thermotoga maritima [TaxId: 2336]

Probab=94.03  E-value=0.2  Score=30.91  Aligned_cols=55  Identities=22%  Similarity=0.282  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         13 ETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN   72 (120)
Q Consensus        13 ~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~   72 (120)
                      ...++|...+..|..+...|..++..+.     =|.....|...+.+|+.|...|-++.-
T Consensus        92 ~~~~~l~~ai~~E~~a~~~Y~~l~~~~~-----d~~~r~~~~~i~~eE~~H~~~l~~l~~  146 (149)
T d1vjxa_          92 TLKEVLDIAISVEKDSIILYYELKDGLV-----NSDAQKTVKKIIDQEKEHLRKLLEMKR  146 (149)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCC-----SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3578899999999999999999998776     367999999999999999999988764

>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=93.77  E-value=0.13  Score=32.29  Aligned_cols=61  Identities=11%  Similarity=0.123  Sum_probs=53.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      ...+...+...+..|..+...|-.++..+.  ..+-+..+.||.....+|..|+..|-+.+..
T Consensus        80 ~~~~~~l~~~~~~~e~e~~~~y~~~~~~a~--~~~D~~~~~~f~~i~~~E~~H~~~f~~~l~~  140 (146)
T d1lkoa1          80 ADTHANLIASAAGEHHEYTEMYPSFARIAR--EEGYEEIARVFASIAVAEEFHEKRFLDFARN  140 (146)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            446677888888899999999999999999  5589999999999999999999999887754

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.45  E-value=0.38  Score=29.67  Aligned_cols=59  Identities=17%  Similarity=0.144  Sum_probs=49.8

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHH---HHHHHh
Q psy12315         10 FHAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKL---IKYLNK   73 (120)
Q Consensus        10 ~~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~l---i~yi~~   73 (120)
                      -+..+.++|...+..|-.+...|..++..+.  |   |...+.|...+.+|..|...+   .+++.+
T Consensus        93 ~~~~~~~~l~~a~~~E~~a~~~Y~~la~~~~--d---~~~~~l~~~i~~~E~~H~~~l~~~~d~l~~  154 (158)
T d2fzfa1          93 KVQDIIDLIRWAMKAEEIAAEFYLKLEEMVK--E---EEKKRLMRYLADMERGHYYTLRAEYELLLN  154 (158)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--S---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHhcC--c---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            4456788999999999999999999998886  3   678999999999999999655   566654

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.60  E-value=0.41  Score=29.91  Aligned_cols=60  Identities=17%  Similarity=0.106  Sum_probs=53.2

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         11 HAETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN   72 (120)
Q Consensus        11 ~~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~   72 (120)
                      ...+.+.+...+..|..+.-.|..+...+.  ..+=++...||.....+|.+|+..|-+++.
T Consensus        80 ~~~~~e~l~~~l~~E~~~~~~y~~~~~~a~--~~~D~~t~~~l~~il~eE~~h~~~l~~~L~  139 (154)
T d2fkza1          80 GEHTKEMLECDLKLEQAGLPDLKAAIAYCE--SVGDYASRELLEDILESEEDHIDWLETQLD  139 (154)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445788899999999999999999999999  557889999999999999999999977765

>d1nnqa1 a.25.1.1 (A:2-134) Rubrerythrin, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.30  E-value=0.48  Score=29.38  Aligned_cols=54  Identities=17%  Similarity=0.061  Sum_probs=45.0

Q ss_pred             HHHHHHHH-HHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         18 INKQINLE-LYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        18 Ln~qi~~E-l~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      |-..+..| ..+.-.|-.++..|.  ..|.++.+.+|.....+|..|+..|-+.+..
T Consensus        72 L~~~~~~e~~e~~~~Y~e~~~~a~--~egd~~~a~~f~~i~~~E~~Ha~~f~~~l~~  126 (133)
T d1nnqa1          72 LQMGIEGETFEVEEMYPVYNKAAE--FQGEKEAVRTTHYALEAEKIHAELYRKAKEK  126 (133)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHhHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445555 678889999999999  5589999999999999999999999877643

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

Probab=91.02  E-value=0.49  Score=30.15  Aligned_cols=63  Identities=11%  Similarity=0.007  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHH---hcCC
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN---KRGG   76 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~---~rGg   76 (120)
                      ....+.|...+..|-.+.-.|..+...++  ..+=++...+|.....+|.+|+..|-+.+.   ..|.
T Consensus        83 ~~~~e~l~~~l~~E~~~~~~y~~~~~~A~--~~~D~~t~~~l~~il~eE~~H~~~~e~~l~~i~~~G~  148 (169)
T d1nf4a_          83 QAVPVIYESDADQEDATIEAYSQFLKVCK--EQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGD  148 (169)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            34557888899999999999999999998  557889999999999999999966655443   5564

>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical rubrerythrin
species: Archaeon Sulfolobus tokodaii [TaxId: 111955]

Probab=89.31  E-value=0.89  Score=27.78  Aligned_cols=47  Identities=17%  Similarity=0.307  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12315         25 ELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLNK   73 (120)
Q Consensus        25 El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~~   73 (120)
                      +..+...|-.++..+.  ..+-++.+.||.....+|.+|+..|-+.+.+
T Consensus        91 ~~e~~~~y~~~~~~A~--~e~d~~~~~~~~~i~~~E~~H~~~f~~~l~~  137 (141)
T d1j30a_          91 TYEWTQMYPGFAKVAR--EEGFPEVAEWFETLARAEKSHAEKFQNVLKQ  137 (141)
T ss_dssp             HHHHHTHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4568888999999988  4589999999999999999999998877644

>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=88.08  E-value=1.1  Score=28.05  Aligned_cols=63  Identities=17%  Similarity=0.128  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHH---HHHHHhcCC
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKL---IKYLNKRGG   76 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~l---i~yi~~rGg   76 (120)
                      ..+.+.|...+..|-.+.-.|..+...|+  ..+=++.+.|+.....+|.+|...|   ++.|...|.
T Consensus        81 ~~~~e~l~~~l~~E~~~~~~~~~~~~~a~--~~~D~~t~~~l~~~l~eee~h~~~l~~~l~~i~~~G~  146 (160)
T d1jgca_          81 EGPRETLECDLAGEHDALKLYREARDYCA--EVGDIVSKNIFESLITDEEGHVDFLETQISLYDRLGP  146 (160)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34678899999999999999999999998  4466889999999999999999777   455555553

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

Probab=86.95  E-value=1.5  Score=27.24  Aligned_cols=59  Identities=19%  Similarity=0.094  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12315         12 AETEEKINKQINLELYASYVYLSMSAHFDRDVVALPGISKYFKHASDEESEHAHKLIKYLN   72 (120)
Q Consensus        12 ~~~~~~Ln~qi~~El~as~~Yl~~a~~f~~~~~~l~g~a~~f~~~s~eE~~hA~~li~yi~   72 (120)
                      ..+.+.|...+..|....-.|.-....++  ..+=++...||.....+|.+|+..|-+++.
T Consensus        81 ~~~~~~l~~~~~~e~~~~~~~~~~~~~a~--~~~D~~t~~~l~~il~eee~h~~~l~~~L~  139 (158)
T d2htna1          81 EDVEEMLRSDLALELDGAKNLREAIGYAD--SVHDYVSRDMMIEILRDEEGHIDWLETELD  139 (158)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34677888999999999999999999988  457789999999999999999999976665