Psyllid ID: psy12356
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 400 | 2.2.26 [Sep-21-2011] | |||||||
| Q8BG02 | 447 | Serine/threonine-protein | yes | N/A | 0.62 | 0.554 | 0.5 | 1e-63 | |
| P36872 | 499 | Protein phosphatase PP2A | yes | N/A | 0.305 | 0.244 | 0.547 | 5e-45 | |
| P36876 | 447 | Serine/threonine-protein | yes | N/A | 0.305 | 0.272 | 0.536 | 1e-41 | |
| Q29090 | 426 | Serine/threonine-protein | yes | N/A | 0.305 | 0.286 | 0.530 | 2e-41 | |
| P63150 | 447 | Serine/threonine-protein | yes | N/A | 0.305 | 0.272 | 0.530 | 2e-41 | |
| Q6P1F6 | 447 | Serine/threonine-protein | no | N/A | 0.305 | 0.272 | 0.530 | 2e-41 | |
| Q4R7Z4 | 447 | Serine/threonine-protein | N/A | N/A | 0.305 | 0.272 | 0.530 | 2e-41 | |
| P63151 | 447 | Serine/threonine-protein | yes | N/A | 0.305 | 0.272 | 0.530 | 2e-41 | |
| P50410 | 447 | Serine/threonine-protein | no | N/A | 0.305 | 0.272 | 0.508 | 5e-41 | |
| Q9Y2T4 | 447 | Serine/threonine-protein | no | N/A | 0.305 | 0.272 | 0.508 | 7e-41 |
| >sp|Q8BG02|2ABG_MOUSE Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Mus musculus GN=Ppp2r2c PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/290 (50%), Positives = 183/290 (63%), Gaps = 42/290 (14%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
GELLATGDKGGRVVIFQR+P SK + +GEY+VYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 36 GELLATGDKGGRVVIFQREPESKNAPHSQGEYDVYSTFQSHEPEFDYLKSLEIEEKINKI 95
Query: 75 RWLRRKNQAHFLLSTNDQS---------------FNIVD------------------IKP 101
+WL ++N AH LLSTND++ +N+ D +KP
Sbjct: 96 KWLPQQNAAHSLLSTNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQVPVLKP 155
Query: 102 TN-MEELNEVITAAEFHPIDCN-LFVYSSSKGTIRLCDMRA----AALCDRHSKCLIEGT 155
+ M E++ T A H N + V S + + D+R A+ DR S +++
Sbjct: 156 MDLMVEVSPRRTFANGHTYHINSISVNSDCETYMSADDLRINLWHLAITDR-SFNIVDIK 214
Query: 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT 215
N + L + E N + K ++RLCDMRAAALCD+HSK FEEPEDP+
Sbjct: 215 PANMEDLTEVITASEFHPHHCNLFVYSSS--KGSLRLCDMRAAALCDKHSKLFEEPEDPS 272
Query: 216 NKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
N+SFFSEIISS+SDVK S+SGRYM++RDYL VKVWDL+ME+RP+ETY H
Sbjct: 273 NRSFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVH 322
|
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Mus musculus (taxid: 10090) |
| >sp|P36872|2ABA_DROME Protein phosphatase PP2A 55 kDa regulatory subunit OS=Drosophila melanogaster GN=tws PE=2 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (461), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 111/179 (62%), Gaps = 57/179 (31%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L +QS+NIVDIKPTNMEEL EVITAAEFHP +CN+FVYSSSKGTIRLCDMR+AALCDR
Sbjct: 258 LEVVNQSYNIVDIKPTNMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSAALCDR 317
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK + EE ++ NR
Sbjct: 318 HSK------------------QFEEPENPTNR---------------------------- 331
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISSISDVK+SNSGRYMISRDYL +KVWDLHME++P+ETYP H
Sbjct: 332 -----------SFFSEIISSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYPVH 379
|
Could perform a substrate recognition function or could be responsible for targeting the enzyme complex to the appropriate subcellular compartment. Drosophila melanogaster (taxid: 7227) |
| >sp|P36876|2ABA_RAT Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus GN=Ppp2r2a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 104/179 (58%), Gaps = 57/179 (31%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L D+SFNIVDIKP NMEEL EVITAAEFHP CN FVYSSSKGTIRLCDMRA+ALCDR
Sbjct: 205 LEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK EE + NR
Sbjct: 265 HSKLF------------------EEPEDPSNR---------------------------- 278
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISSISDVK S+SGRYM++RDYL VKVWDL+ME+RPVETY H
Sbjct: 279 -----------SFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVH 326
|
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Rattus norvegicus (taxid: 10116) |
| >sp|Q29090|2ABA_PIG Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (Fragment) OS=Sus scrofa GN=PPP2R2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 104/179 (58%), Gaps = 57/179 (31%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L D+SFNIVDIKP NMEEL EVITAAEFHP CN FVYSSSKGTIRLCDMRA+ALCDR
Sbjct: 184 LEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 243
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK EE + NR
Sbjct: 244 HSKLF------------------EEPEDPSNR---------------------------- 257
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISSISDVK S+SGRYM++RDYL VK+WDL+ME+RPVETY H
Sbjct: 258 -----------SFFSEIISSISDVKFSHSGRYMMTRDYLSVKIWDLNMENRPVETYQVH 305
|
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Sus scrofa (taxid: 9823) |
| >sp|P63150|2ABA_RABIT Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Oryctolagus cuniculus GN=PPP2R2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 104/179 (58%), Gaps = 57/179 (31%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L D+SFNIVDIKP NMEEL EVITAAEFHP CN FVYSSSKGTIRLCDMRA+ALCDR
Sbjct: 205 LEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK EE + NR
Sbjct: 265 HSKLF------------------EEPEDPSNR---------------------------- 278
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISSISDVK S+SGRYM++RDYL VK+WDL+ME+RPVETY H
Sbjct: 279 -----------SFFSEIISSISDVKFSHSGRYMMTRDYLSVKIWDLNMENRPVETYQVH 326
|
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Oryctolagus cuniculus (taxid: 9986) |
| >sp|Q6P1F6|2ABA_MOUSE Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Mus musculus GN=Ppp2r2a PE=1 SV=1 | Back alignment and function description |
|---|
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 104/179 (58%), Gaps = 57/179 (31%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L D+SFNIVDIKP NMEEL EVITAAEFHP CN FVYSSSKGTIRLCDMRA+ALCDR
Sbjct: 205 LEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK EE + NR
Sbjct: 265 HSKLF------------------EEPEDPSNR---------------------------- 278
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISSISDVK S+SGRYM++RDYL VK+WDL+ME+RPVETY H
Sbjct: 279 -----------SFFSEIISSISDVKFSHSGRYMMTRDYLSVKIWDLNMENRPVETYQVH 326
|
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Mus musculus (taxid: 10090) |
| >sp|Q4R7Z4|2ABA_MACFA Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Macaca fascicularis GN=PPP2R2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 104/179 (58%), Gaps = 57/179 (31%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L D+SFNIVDIKP NMEEL EVITAAEFHP CN FVYSSSKGTIRLCDMRA+ALCDR
Sbjct: 205 LEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK EE + NR
Sbjct: 265 HSKLF------------------EEPEDPSNR---------------------------- 278
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISSISDVK S+SGRYM++RDYL VK+WDL+ME+RPVETY H
Sbjct: 279 -----------SFFSEIISSISDVKFSHSGRYMMTRDYLSVKIWDLNMENRPVETYQVH 326
|
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Macaca fascicularis (taxid: 9541) |
| >sp|P63151|2ABA_HUMAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Homo sapiens GN=PPP2R2A PE=1 SV=1 | Back alignment and function description |
|---|
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 104/179 (58%), Gaps = 57/179 (31%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L D+SFNIVDIKP NMEEL EVITAAEFHP CN FVYSSSKGTIRLCDMRA+ALCDR
Sbjct: 205 LEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK EE + NR
Sbjct: 265 HSKLF------------------EEPEDPSNR---------------------------- 278
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISSISDVK S+SGRYM++RDYL VK+WDL+ME+RPVETY H
Sbjct: 279 -----------SFFSEIISSISDVKFSHSGRYMMTRDYLSVKIWDLNMENRPVETYQVH 326
|
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Homo sapiens (taxid: 9606) |
| >sp|P50410|2ABG_RABIT Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Oryctolagus cuniculus GN=PPP2R2C PE=2 SV=1 | Back alignment and function description |
|---|
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 106/179 (59%), Gaps = 57/179 (31%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L+ D+SFNIVDIKP NME+L EVITA+EFHP CNLFVYSSSKG++RLCDMRAAALCD+
Sbjct: 201 LAVTDRSFNIVDIKPANMEDLTEVITASEFHPHHCNLFVYSSSKGSLRLCDMRAAALCDK 260
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK EE + NR
Sbjct: 261 HSKLF------------------EEPEDPSNR---------------------------- 274
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISS+SDVK S+SGRYM++RDYL VKVWDL+ME+RP+ETY H
Sbjct: 275 -----------SFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVH 322
|
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Oryctolagus cuniculus (taxid: 9986) |
| >sp|Q9Y2T4|2ABG_HUMAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Homo sapiens GN=PPP2R2C PE=2 SV=4 | Back alignment and function description |
|---|
Score = 168 bits (426), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 106/179 (59%), Gaps = 57/179 (31%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L+ D+SFNIVDIKP NME+L EVITA+EFHP CNLFVYSSSKG++RLCDMRAAALCD+
Sbjct: 201 LAITDRSFNIVDIKPANMEDLTEVITASEFHPHHCNLFVYSSSKGSLRLCDMRAAALCDK 260
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK EE + NR
Sbjct: 261 HSKLF------------------EEPEDPSNR---------------------------- 274
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISS+SDVK S+SGRYM++RDYL VKVWDL+ME+RP+ETY H
Sbjct: 275 -----------SFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVH 322
|
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. Homo sapiens (taxid: 9606) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 400 | ||||||
| 390340050 | 395 | PREDICTED: serine/threonine-protein phos | 0.477 | 0.483 | 0.607 | 2e-75 | |
| 351705056 | 422 | Serine/threonine-protein phosphatase 2A | 0.592 | 0.561 | 0.561 | 2e-63 | |
| 27370502 | 447 | serine/threonine-protein phosphatase 2A | 0.62 | 0.554 | 0.5 | 7e-62 | |
| 148705571 | 423 | protein phosphatase 2 (formerly 2A), reg | 0.62 | 0.586 | 0.5 | 9e-62 | |
| 327273273 | 446 | PREDICTED: serine/threonine-protein phos | 0.62 | 0.556 | 0.482 | 2e-58 | |
| 327273275 | 427 | PREDICTED: serine/threonine-protein phos | 0.62 | 0.580 | 0.482 | 2e-58 | |
| 326677931 | 674 | PREDICTED: serine/threonine-protein phos | 0.625 | 0.370 | 0.461 | 1e-52 | |
| 302412307 | 460 | protein phosphatase PP2A regulatory subu | 0.61 | 0.530 | 0.427 | 5e-47 | |
| 355749148 | 533 | PP2A subunit B isoform gamma [Macaca fas | 0.332 | 0.249 | 0.547 | 6e-46 | |
| 262304689 | 255 | protein phosphatase [Periplaneta america | 0.305 | 0.478 | 0.569 | 2e-45 |
| >gi|390340050|ref|XP_003725154.1| PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like [Strongylocentrotus purpuratus] | Back alignment and taxonomy information |
|---|
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/252 (60%), Positives = 169/252 (67%), Gaps = 61/252 (24%)
Query: 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK 73
DGELLATGDKGGRVVIFQR+ S+ S P RGEYNVYSTFQSHEPEFDYLKSLEIEEKINK
Sbjct: 83 DGELLATGDKGGRVVIFQREDSSRNSTPPRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK 142
Query: 74 IRWLRRKNQAHFLLSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTI 133
I+WL R+N AHFLLSTND IVDIKP NME+L EVITAAEFHP DCNLFVYSSSKGTI
Sbjct: 143 IKWLPRQNHAHFLLSTND----IVDIKPANMEDLTEVITAAEFHPKDCNLFVYSSSKGTI 198
Query: 134 RLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLC 193
RLCDMR +ALCD+ +K EE + NR
Sbjct: 199 RLCDMRQSALCDQSAKIF------------------EEPEDPSNR--------------- 225
Query: 194 DMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLH 253
SFFSEIISSISDV+ S+SGRY+ISRDYL VKVWDL
Sbjct: 226 ------------------------SFFSEIISSISDVRFSHSGRYLISRDYLSVKVWDLL 261
Query: 254 MESRPVETYPTH 265
M+++PVET+P H
Sbjct: 262 MDTKPVETFPVH 273
|
Source: Strongylocentrotus purpuratus Species: Strongylocentrotus purpuratus Genus: Strongylocentrotus Family: Strongylocentrotidae Order: Echinoida Class: Echinoidea Phylum: Echinodermata Superkingdom: Eukaryota |
| >gi|351705056|gb|EHB07975.1| Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform [Heterocephalus glaber] | Back alignment and taxonomy information |
|---|
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/251 (56%), Positives = 171/251 (68%), Gaps = 14/251 (5%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
G+LLATGDKGGRVVIFQR+ SK+ RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 43 GDLLATGDKGGRVVIFQREQESKSRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 102
Query: 75 RWLRRKNQAHFLLSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIR 134
RWL ++N AHFLLSTND++ IK + E ++ D L + R
Sbjct: 103 RWLPQQNAAHFLLSTNDKT-----IKLWKISERDKRAEGYNLKDEDGRL------RDPFR 151
Query: 135 LCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCD 194
+ +R + DR S +++ N + L + E N + K IRLCD
Sbjct: 152 ITALRHLEITDR-SFNIVDIKPANMEELTEVITAAEFHPHQCNVFVYSSS--KGTIRLCD 208
Query: 195 MRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHM 254
MR++ALCDRHSKFFEEPEDP+++SFFSEIISSISDVK S+SGRYM++RDYL VKVWDL+M
Sbjct: 209 MRSSALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNM 268
Query: 255 ESRPVETYPTH 265
ESRPVET+ H
Sbjct: 269 ESRPVETHQVH 279
|
Source: Heterocephalus glaber Species: Heterocephalus glaber Genus: Heterocephalus Family: Bathyergidae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|27370502|ref|NP_766582.1| serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform [Mus musculus] gi|81873655|sp|Q8BG02.1|2ABG_MOUSE RecName: Full=Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform; AltName: Full=PP2A subunit B isoform B55-gamma; AltName: Full=PP2A subunit B isoform PR55-gamma; AltName: Full=PP2A subunit B isoform R2-gamma; AltName: Full=PP2A subunit B isoform gamma gi|26327827|dbj|BAC27654.1| unnamed protein product [Mus musculus] gi|26340560|dbj|BAC33942.1| unnamed protein product [Mus musculus] gi|33867945|gb|AAQ55226.1| protein phosphatase 2 regulatory subunit B gamma isoform [Mus musculus] gi|37589444|gb|AAH59811.1| Protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform [Mus musculus] | Back alignment and taxonomy information |
|---|
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 145/290 (50%), Positives = 183/290 (63%), Gaps = 42/290 (14%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
GELLATGDKGGRVVIFQR+P SK + +GEY+VYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 36 GELLATGDKGGRVVIFQREPESKNAPHSQGEYDVYSTFQSHEPEFDYLKSLEIEEKINKI 95
Query: 75 RWLRRKNQAHFLLSTNDQS---------------FNIVD------------------IKP 101
+WL ++N AH LLSTND++ +N+ D +KP
Sbjct: 96 KWLPQQNAAHSLLSTNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQVPVLKP 155
Query: 102 TN-MEELNEVITAAEFHPIDCN-LFVYSSSKGTIRLCDMRA----AALCDRHSKCLIEGT 155
+ M E++ T A H N + V S + + D+R A+ DR S +++
Sbjct: 156 MDLMVEVSPRRTFANGHTYHINSISVNSDCETYMSADDLRINLWHLAITDR-SFNIVDIK 214
Query: 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT 215
N + L + E N + K ++RLCDMRAAALCD+HSK FEEPEDP+
Sbjct: 215 PANMEDLTEVITASEFHPHHCNLFVYSSS--KGSLRLCDMRAAALCDKHSKLFEEPEDPS 272
Query: 216 NKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
N+SFFSEIISS+SDVK S+SGRYM++RDYL VKVWDL+ME+RP+ETY H
Sbjct: 273 NRSFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVH 322
|
Source: Mus musculus Species: Mus musculus Genus: Mus Family: Muridae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|148705571|gb|EDL37518.1| protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform [Mus musculus] | Back alignment and taxonomy information |
|---|
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 145/290 (50%), Positives = 183/290 (63%), Gaps = 42/290 (14%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
GELLATGDKGGRVVIFQR+P SK + +GEY+VYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 12 GELLATGDKGGRVVIFQREPESKNAPHSQGEYDVYSTFQSHEPEFDYLKSLEIEEKINKI 71
Query: 75 RWLRRKNQAHFLLSTNDQS---------------FNIVD------------------IKP 101
+WL ++N AH LLSTND++ +N+ D +KP
Sbjct: 72 KWLPQQNAAHSLLSTNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQVPVLKP 131
Query: 102 TN-MEELNEVITAAEFHPIDCN-LFVYSSSKGTIRLCDMRA----AALCDRHSKCLIEGT 155
+ M E++ T A H N + V S + + D+R A+ DR S +++
Sbjct: 132 MDLMVEVSPRRTFANGHTYHINSISVNSDCETYMSADDLRINLWHLAITDR-SFNIVDIK 190
Query: 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT 215
N + L + E N + K ++RLCDMRAAALCD+HSK FEEPEDP+
Sbjct: 191 PANMEDLTEVITASEFHPHHCNLFVYSSS--KGSLRLCDMRAAALCDKHSKLFEEPEDPS 248
Query: 216 NKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
N+SFFSEIISS+SDVK S+SGRYM++RDYL VKVWDL+ME+RP+ETY H
Sbjct: 249 NRSFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVH 298
|
Source: Mus musculus Species: Mus musculus Genus: Mus Family: Muridae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|327273273|ref|XP_003221405.1| PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like isoform 1 [Anolis carolinensis] | Back alignment and taxonomy information |
|---|
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/290 (48%), Positives = 178/290 (61%), Gaps = 42/290 (14%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
GELLATGDKGGRVVIFQR+P SK +GEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 35 GELLATGDKGGRVVIFQREPESKNDPYGQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 94
Query: 75 RWLRRKNQAHFLLSTNDQS---------------FNIVD------------------IKP 101
+WL ++N H LLSTND++ +N+ D +KP
Sbjct: 95 KWLPQQNAGHSLLSTNDKTIKLWKITERDKKPEGYNLKDEEGKLKDLSTVTSLQVPVLKP 154
Query: 102 TN-MEELNEVITAAEFHPIDCN-LFVYSSSKGTIRLCDMRA----AALCDRHSKCLIEGT 155
T+ M E++ A H N + V S + + D+R A+ DR S +++
Sbjct: 155 TDLMVEVSPRRIFANGHTYHVNSISVNSDCETYMSADDLRINLWHLAITDR-SFNIVDIK 213
Query: 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT 215
N + L + E N + K ++RLCDMRA+ALCD+H K FEEPEDP
Sbjct: 214 PANMEDLTEVITASEFHPHHCNLFVYSSS--KGSLRLCDMRASALCDKHFKLFEEPEDPG 271
Query: 216 NKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
++SFFSEIISS+SDVK S+SGRYM++RDYL VKVWDL+ME++P+E Y H
Sbjct: 272 SRSFFSEIISSVSDVKFSHSGRYMLARDYLTVKVWDLNMETKPIEIYQIH 321
|
Source: Anolis carolinensis Species: Anolis carolinensis Genus: Anolis Family: Iguanidae Order: Squamata Class: Phylum: Chordata Superkingdom: Eukaryota |
| >gi|327273275|ref|XP_003221406.1| PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like isoform 2 [Anolis carolinensis] | Back alignment and taxonomy information |
|---|
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/290 (48%), Positives = 178/290 (61%), Gaps = 42/290 (14%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
GELLATGDKGGRVVIFQR+P SK +GEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 16 GELLATGDKGGRVVIFQREPESKNDPYGQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 75
Query: 75 RWLRRKNQAHFLLSTNDQS---------------FNIVD------------------IKP 101
+WL ++N H LLSTND++ +N+ D +KP
Sbjct: 76 KWLPQQNAGHSLLSTNDKTIKLWKITERDKKPEGYNLKDEEGKLKDLSTVTSLQVPVLKP 135
Query: 102 TN-MEELNEVITAAEFHPIDCN-LFVYSSSKGTIRLCDMRA----AALCDRHSKCLIEGT 155
T+ M E++ A H N + V S + + D+R A+ DR S +++
Sbjct: 136 TDLMVEVSPRRIFANGHTYHVNSISVNSDCETYMSADDLRINLWHLAITDR-SFNIVDIK 194
Query: 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT 215
N + L + E N + K ++RLCDMRA+ALCD+H K FEEPEDP
Sbjct: 195 PANMEDLTEVITASEFHPHHCNLFVYSSS--KGSLRLCDMRASALCDKHFKLFEEPEDPG 252
Query: 216 NKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
++SFFSEIISS+SDVK S+SGRYM++RDYL VKVWDL+ME++P+E Y H
Sbjct: 253 SRSFFSEIISSVSDVKFSHSGRYMLARDYLTVKVWDLNMETKPIEIYQIH 302
|
Source: Anolis carolinensis Species: Anolis carolinensis Genus: Anolis Family: Iguanidae Order: Squamata Class: Phylum: Chordata Superkingdom: Eukaryota |
| >gi|326677931|ref|XP_001919558.3| PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Danio rerio] | Back alignment and taxonomy information |
|---|
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 167/288 (57%), Gaps = 38/288 (13%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
GELLATGDKGGRVV+FQR+ SK +RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 267 GELLATGDKGGRVVVFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 326
Query: 75 RWLRRKNQAHFLLSTNDQSFNIVDI-----KPTNMEELNE--------VITAAE---FHP 118
RWL ++N A+FLLSTND++ + I +P +E ITA P
Sbjct: 327 RWLPQQNAAYFLLSTNDKTVKLWKISERDKRPEGYNLKDEDGRIRDPSTITALRVPVLRP 386
Query: 119 ID-----------CNLFVYSSSKGTIRLCDMRAAALCD--RHSKCLIEGTNCNCQGLIVP 165
+D N Y + ++ D D R + +E TN + + +
Sbjct: 387 MDLMVEATPRRIFANAHTYHINSISVN-SDYETYMSTDDLRINLWNLEITNRSFNIVDIK 445
Query: 166 ESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCD--------RHSKFFEEPEDPTNK 217
+ EE E N+ + + LCD HSK FEEPEDP+N+
Sbjct: 446 PANMEELTEVITAAEFHPNQCNTFVYSSSKGSIRLCDMRTSALCDNHSKLFEEPEDPSNR 505
Query: 218 SFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISSISDVK S+SGRY+++RDYL VKVWD++MES+P+ETY H
Sbjct: 506 SFFSEIISSISDVKFSHSGRYLMTRDYLTVKVWDINMESKPLETYQVH 553
|
Source: Danio rerio Species: Danio rerio Genus: Danio Family: Cyprinidae Order: Cypriniformes Class: Actinopterygii Phylum: Chordata Superkingdom: Eukaryota |
| >gi|302412307|ref|XP_003003986.1| protein phosphatase PP2A regulatory subunit B [Verticillium albo-atrum VaMs.102] gi|261356562|gb|EEY18990.1| protein phosphatase PP2A regulatory subunit B [Verticillium albo-atrum VaMs.102] | Back alignment and taxonomy information |
|---|
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/283 (42%), Positives = 161/283 (56%), Gaps = 39/283 (13%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
G LATGDKGGRVV+F+R+ KT EY ++ FQSHEPEFDYLKSLEIEEKINKI
Sbjct: 41 GNYLATGDKGGRVVLFERNETKKTC-----EYKFHTEFQSHEPEFDYLKSLEIEEKINKI 95
Query: 75 RWLRRKNQAHFLLSTN----------DQSFNIV-------DIKPTNMEELNEVI------ 111
+W RR+N +H+LLSTN ++S +V D+ P+N+
Sbjct: 96 KWCRRQNASHYLLSTNDKTIKLWKVFEKSLKVVAENNLSHDLTPSNVAGGGGTQSDASHL 155
Query: 112 -----TAAEFHPIDCN-LFVYSSSKGTIRLCDMRAAAL---CDRHSKCLIEGTNCNCQGL 162
T A H N + V S + I D+R S +++ N + L
Sbjct: 156 TVPRRTYANAHAYHINSISVNSDGETFISSDDLRINLWNLNIQDQSFNIVDIKPANMEEL 215
Query: 163 IVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222
+ E S N + K I+L DMR +ALCD+H+K FE+ EDP+++SFFSE
Sbjct: 216 TEVITAAEFHPQSCNWFMYASS--KGTIKLADMRESALCDQHAKLFEQEEDPSSRSFFSE 273
Query: 223 IISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
IISSISDV+ S GRY++SRDYL VK+WD++ME +PV+T P H
Sbjct: 274 IISSISDVRFSFDGRYILSRDYLTVKIWDINMERQPVKTIPIH 316
|
Source: Verticillium albo-atrum VaMs.102 Species: Verticillium alfalfae Genus: Verticillium Family: Plectosphaerellaceae Order: Glomerellales Class: Sordariomycetes Phylum: Ascomycota Superkingdom: Eukaryota |
| >gi|355749148|gb|EHH53547.1| PP2A subunit B isoform gamma [Macaca fascicularis] | Back alignment and taxonomy information |
|---|
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 116/179 (64%), Gaps = 46/179 (25%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L+ D+SFNIVDIKP NME+L EVITA+EFHP CNLFVYSSSKG++RLCDMRAAALCD+
Sbjct: 276 LAITDRSFNIVDIKPANMEDLTEVITASEFHPHHCNLFVYSSSKGSLRLCDMRAAALCDK 335
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK P+ C +R
Sbjct: 336 HSK------------------------------------HPPSSSWCAVRV--------- 350
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
FEEPEDP+N+SFFSEIISS+SDVK S+SGRYM++RDYL VKVWDL+ME+RP+ETY H
Sbjct: 351 -FEEPEDPSNRSFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVH 408
|
Source: Macaca fascicularis Species: Macaca fascicularis Genus: Macaca Family: Cercopithecidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|262304689|gb|ACY44937.1| protein phosphatase [Periplaneta americana] | Back alignment and taxonomy information |
|---|
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 110/179 (61%), Gaps = 57/179 (31%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L DQSFNIVDIKPTNMEEL EVITAAEFHP++CNLFVYSSSKGTIRLCDMRAAALCDR
Sbjct: 119 LEITDQSFNIVDIKPTNMEELTEVITAAEFHPVECNLFVYSSSKGTIRLCDMRAAALCDR 178
Query: 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206
HSK EE + NR
Sbjct: 179 HSKLF------------------EEPEDPTNR---------------------------- 192
Query: 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTH 265
SFFSEIISSISDVK+SNSGRYMISRDYL VKVWDLHME++P+E+YP H
Sbjct: 193 -----------SFFSEIISSISDVKLSNSGRYMISRDYLSVKVWDLHMETKPIESYPVH 240
|
Source: Periplaneta americana Species: Periplaneta americana Genus: Periplaneta Family: Blattidae Order: Blattodea Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 400 | ||||||
| FB|FBgn0004889 | 499 | tws "twins" [Drosophila melano | 0.207 | 0.166 | 0.831 | 5.4e-65 | |
| ZFIN|ZDB-GENE-040426-2086 | 447 | ppp2r2d "protein phosphatase 2 | 0.205 | 0.183 | 0.792 | 9.9e-60 | |
| ZFIN|ZDB-GENE-070424-128 | 448 | si:ch211-136d9.1 "si:ch211-136 | 0.205 | 0.183 | 0.792 | 9.9e-60 | |
| UNIPROTKB|Q6DIY3 | 447 | ppp2r2d "Serine/threonine-prot | 0.205 | 0.183 | 0.768 | 2e-59 | |
| UNIPROTKB|F1NNN2 | 450 | PPP2R2D "Serine/threonine-prot | 0.205 | 0.182 | 0.768 | 2e-59 | |
| UNIPROTKB|F1NS69 | 451 | PPP2R2D "Serine/threonine-prot | 0.205 | 0.181 | 0.768 | 2e-59 | |
| UNIPROTKB|Q5ZIY5 | 451 | PPP2R2D "Serine/threonine-prot | 0.205 | 0.181 | 0.768 | 2e-59 | |
| UNIPROTKB|Q66LE6 | 453 | PPP2R2D "Serine/threonine-prot | 0.205 | 0.181 | 0.768 | 2e-59 | |
| UNIPROTKB|F1Q3I7 | 501 | PPP2R2B "Uncharacterized prote | 0.205 | 0.163 | 0.780 | 2.2e-59 | |
| UNIPROTKB|Q5E9Q7 | 443 | PPP2R2B "Serine/threonine-prot | 0.205 | 0.185 | 0.780 | 2.6e-59 |
| FB|FBgn0004889 tws "twins" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 370 (135.3 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 69/83 (83%), Positives = 76/83 (91%)
Query: 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK 73
DGELLATGDKGGRVVIFQRDP SK + P+RGEYNVYSTFQSHEPEFDYLKSLEIEEKINK
Sbjct: 92 DGELLATGDKGGRVVIFQRDPASKAANPRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK 151
Query: 74 IRWLRRKNQAHFLLSTNDQSFNI 96
IRWL++KN HFLLSTND++ +
Sbjct: 152 IRWLQQKNPVHFLLSTNDKTVKL 174
|
|
| ZFIN|ZDB-GENE-040426-2086 ppp2r2d "protein phosphatase 2, regulatory subunit B, delta" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 334 (122.6 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 65/82 (79%), Positives = 71/82 (86%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
GELLATGDKGGRVVIFQR+ SK RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 40 GELLATGDKGGRVVIFQREQESKNRPLSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 99
Query: 75 RWLRRKNQAHFLLSTNDQSFNI 96
RWL ++N AHFLLSTND++ +
Sbjct: 100 RWLPQQNAAHFLLSTNDKTIKL 121
|
|
| ZFIN|ZDB-GENE-070424-128 si:ch211-136d9.1 "si:ch211-136d9.1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 334 (122.6 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 65/82 (79%), Positives = 71/82 (86%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
GELLATGDKGGRVVIFQR+ SK RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 41 GELLATGDKGGRVVIFQREQESKNRPLSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 100
Query: 75 RWLRRKNQAHFLLSTNDQSFNI 96
RWL ++N AHFLLSTND++ +
Sbjct: 101 RWLPQQNAAHFLLSTNDKTIKL 122
|
|
| UNIPROTKB|Q6DIY3 ppp2r2d "Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform" [Xenopus (Silurana) tropicalis (taxid:8364)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 63/82 (76%), Positives = 72/82 (87%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
G+LLATGDKGGRVVIFQR+ +K+ RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 40 GDLLATGDKGGRVVIFQREQENKSRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 99
Query: 75 RWLRRKNQAHFLLSTNDQSFNI 96
RWL ++N AHFLLSTND++ +
Sbjct: 100 RWLPQQNAAHFLLSTNDKTIKL 121
|
|
| UNIPROTKB|F1NNN2 PPP2R2D "Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 63/82 (76%), Positives = 72/82 (87%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
G+LLATGDKGGRVVIFQR+ +K+ RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 43 GDLLATGDKGGRVVIFQREQENKSRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 102
Query: 75 RWLRRKNQAHFLLSTNDQSFNI 96
RWL ++N AHFLLSTND++ +
Sbjct: 103 RWLPQQNAAHFLLSTNDKTIKL 124
|
|
| UNIPROTKB|F1NS69 PPP2R2D "Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 63/82 (76%), Positives = 72/82 (87%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
G+LLATGDKGGRVVIFQR+ +K+ RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 44 GDLLATGDKGGRVVIFQREQENKSRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 103
Query: 75 RWLRRKNQAHFLLSTNDQSFNI 96
RWL ++N AHFLLSTND++ +
Sbjct: 104 RWLPQQNAAHFLLSTNDKTIKL 125
|
|
| UNIPROTKB|Q5ZIY5 PPP2R2D "Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 63/82 (76%), Positives = 72/82 (87%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
G+LLATGDKGGRVVIFQR+ +K+ RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 44 GDLLATGDKGGRVVIFQREQENKSRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 103
Query: 75 RWLRRKNQAHFLLSTNDQSFNI 96
RWL ++N AHFLLSTND++ +
Sbjct: 104 RWLPQQNAAHFLLSTNDKTIKL 125
|
|
| UNIPROTKB|Q66LE6 PPP2R2D "Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 63/82 (76%), Positives = 72/82 (87%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
G+LLATGDKGGRVVIFQR+ +K+ RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 46 GDLLATGDKGGRVVIFQREQENKSRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 105
Query: 75 RWLRRKNQAHFLLSTNDQSFNI 96
RWL ++N AHFLLSTND++ +
Sbjct: 106 RWLPQQNAAHFLLSTNDKTIKL 127
|
|
| UNIPROTKB|F1Q3I7 PPP2R2B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 337 (123.7 bits), Expect = 2.2e-59, Sum P(2) = 2.2e-59
Identities = 64/82 (78%), Positives = 73/82 (89%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
GELLATGDKGGRVVIFQR+ SK + +RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 94 GELLATGDKGGRVVIFQREQESKNQVHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 153
Query: 75 RWLRRKNQAHFLLSTNDQSFNI 96
RWL ++N A+FLLSTND++ +
Sbjct: 154 RWLPQQNAAYFLLSTNDKTVKL 175
|
|
| UNIPROTKB|Q5E9Q7 PPP2R2B "Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 337 (123.7 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 64/82 (78%), Positives = 73/82 (89%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
GELLATGDKGGRVVIFQR+ SK + +RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI
Sbjct: 36 GELLATGDKGGRVVIFQREQESKNQVHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 95
Query: 75 RWLRRKNQAHFLLSTNDQSFNI 96
RWL ++N A+FLLSTND++ +
Sbjct: 96 RWLPQQNAAYFLLSTNDKTVKL 117
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 400 | |||
| COG5170 | 460 | COG5170, CDC55, Serine/threonine protein phosphata | 1e-25 | |
| COG5170 | 460 | COG5170, CDC55, Serine/threonine protein phosphata | 2e-24 | |
| COG5170 | 460 | COG5170, CDC55, Serine/threonine protein phosphata | 2e-22 | |
| COG5170 | 460 | COG5170, CDC55, Serine/threonine protein phosphata | 3e-22 |
| >gnl|CDD|227498 COG5170, CDC55, Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 29/166 (17%)
Query: 222 EIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITA 281
E I++I + +++S + +K+W ++ ++ V + + + P T
Sbjct: 86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTK 145
Query: 282 -LRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISS 340
L +P++ + + A P R++ANAH YHINSIS NSD+
Sbjct: 146 ELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK--------------------- 184
Query: 341 TSVNSDQETYLSADDLRINLWHLEITDQSFNIVDIKPTNMEELNEV 386
ET LSADDLRINLW+LEI D SFNIVDIKP NMEEL EV
Sbjct: 185 -------ETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEV 223
|
Length = 460 |
| >gnl|CDD|227498 COG5170, CDC55, Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 2e-24
Identities = 51/103 (49%), Positives = 64/103 (62%), Gaps = 6/103 (5%)
Query: 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74
G LATGDKGGRVV+F+R+ EY ++ FQSHE EFDYLKSLEIEEKIN I
Sbjct: 38 GLYLATGDKGGRVVLFEREKS------YGCEYKFFTEFQSHELEFDYLKSLEIEEKINAI 91
Query: 75 RWLRRKNQAHFLLSTNDQSFNIVDIKPTNMEELNEVITAAEFH 117
W + HFLLSTND++ + I N++ + E + FH
Sbjct: 92 EWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFH 134
|
Length = 460 |
| >gnl|CDD|227498 COG5170, CDC55, Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 98.6 bits (245), Expect = 2e-22
Identities = 43/63 (68%), Positives = 49/63 (77%)
Query: 87 LSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146
L D SFNIVDIKP NMEEL EVIT+AEFHP CN+F+YSSSKG I+L D+R +ALCD
Sbjct: 200 LEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDN 259
Query: 147 HSK 149
K
Sbjct: 260 SKK 262
|
Length = 460 |
| >gnl|CDD|227498 COG5170, CDC55, Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 97.8 bits (243), Expect = 3e-22
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 187 KPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLC 246
K I+L D+R +ALCD K FE D + FF EI+SSISD K S++GRY++SRDYL
Sbjct: 243 KGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLT 302
Query: 247 VKVWDLHMESRPVETYPTH 265
VK+WD++M P++T P H
Sbjct: 303 VKIWDVNMAKNPIKTIPMH 321
|
Length = 460 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 400 | |||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0315|consensus | 311 | 99.97 | ||
| KOG0266|consensus | 456 | 99.97 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.97 | |
| KOG0284|consensus | 464 | 99.97 | ||
| KOG0318|consensus | 603 | 99.97 | ||
| KOG0285|consensus | 460 | 99.96 | ||
| KOG0295|consensus | 406 | 99.96 | ||
| KOG0293|consensus | 519 | 99.96 | ||
| KOG0282|consensus | 503 | 99.96 | ||
| KOG0279|consensus | 315 | 99.96 | ||
| KOG0316|consensus | 307 | 99.96 | ||
| KOG0319|consensus | 775 | 99.96 | ||
| KOG0645|consensus | 312 | 99.96 | ||
| KOG0291|consensus | 893 | 99.96 | ||
| KOG0273|consensus | 524 | 99.96 | ||
| KOG0263|consensus | 707 | 99.96 | ||
| KOG0772|consensus | 641 | 99.96 | ||
| KOG0283|consensus | 712 | 99.95 | ||
| KOG0295|consensus | 406 | 99.95 | ||
| KOG0291|consensus | 893 | 99.95 | ||
| KOG0319|consensus | 775 | 99.95 | ||
| KOG0318|consensus | 603 | 99.95 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.95 | |
| KOG1354|consensus | 433 | 99.95 | ||
| KOG0315|consensus | 311 | 99.95 | ||
| KOG0281|consensus | 499 | 99.95 | ||
| KOG0273|consensus | 524 | 99.94 | ||
| KOG0306|consensus | 888 | 99.94 | ||
| KOG0286|consensus | 343 | 99.94 | ||
| KOG0640|consensus | 430 | 99.94 | ||
| KOG0277|consensus | 311 | 99.94 | ||
| KOG0277|consensus | 311 | 99.94 | ||
| KOG1446|consensus | 311 | 99.94 | ||
| KOG0278|consensus | 334 | 99.94 | ||
| KOG0285|consensus | 460 | 99.94 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.93 | |
| KOG0643|consensus | 327 | 99.93 | ||
| KOG0292|consensus | 1202 | 99.93 | ||
| KOG0266|consensus | 456 | 99.93 | ||
| KOG0284|consensus | 464 | 99.93 | ||
| KOG0276|consensus | 794 | 99.93 | ||
| KOG0645|consensus | 312 | 99.92 | ||
| KOG0264|consensus | 422 | 99.92 | ||
| KOG0310|consensus | 487 | 99.92 | ||
| KOG0281|consensus | 499 | 99.92 | ||
| KOG0275|consensus | 508 | 99.92 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.92 | |
| KOG0292|consensus | 1202 | 99.92 | ||
| KOG0296|consensus | 399 | 99.92 | ||
| KOG0313|consensus | 423 | 99.91 | ||
| KOG0265|consensus | 338 | 99.91 | ||
| KOG0274|consensus | 537 | 99.91 | ||
| KOG0289|consensus | 506 | 99.91 | ||
| KOG1407|consensus | 313 | 99.91 | ||
| KOG0305|consensus | 484 | 99.91 | ||
| KOG2096|consensus | 420 | 99.91 | ||
| KOG0288|consensus | 459 | 99.9 | ||
| KOG0313|consensus | 423 | 99.9 | ||
| KOG0276|consensus | 794 | 99.9 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.9 | |
| KOG0308|consensus | 735 | 99.89 | ||
| KOG0306|consensus | 888 | 99.89 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.89 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.89 | |
| PTZ00420 | 568 | coronin; Provisional | 99.89 | |
| KOG1332|consensus | 299 | 99.88 | ||
| KOG2445|consensus | 361 | 99.88 | ||
| KOG0269|consensus | 839 | 99.88 | ||
| KOG0300|consensus | 481 | 99.88 | ||
| KOG0973|consensus | 942 | 99.88 | ||
| KOG0641|consensus | 350 | 99.87 | ||
| KOG0282|consensus | 503 | 99.87 | ||
| KOG0647|consensus | 347 | 99.87 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.87 | |
| KOG0973|consensus | 942 | 99.86 | ||
| KOG0268|consensus | 433 | 99.86 | ||
| KOG4283|consensus | 397 | 99.86 | ||
| KOG0278|consensus | 334 | 99.85 | ||
| KOG0274|consensus | 537 | 99.85 | ||
| KOG0310|consensus | 487 | 99.85 | ||
| KOG0301|consensus | 745 | 99.84 | ||
| KOG0299|consensus | 479 | 99.83 | ||
| KOG0302|consensus | 440 | 99.83 | ||
| KOG0321|consensus | 720 | 99.83 | ||
| KOG1354|consensus | 433 | 99.83 | ||
| KOG0641|consensus | 350 | 99.83 | ||
| KOG0296|consensus | 399 | 99.83 | ||
| KOG0772|consensus | 641 | 99.83 | ||
| KOG0269|consensus | 839 | 99.83 | ||
| KOG0267|consensus | 825 | 99.83 | ||
| KOG0294|consensus | 362 | 99.83 | ||
| KOG0288|consensus | 459 | 99.82 | ||
| KOG0293|consensus | 519 | 99.82 | ||
| KOG0275|consensus | 508 | 99.82 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.82 | |
| KOG1407|consensus | 313 | 99.82 | ||
| KOG1063|consensus | 764 | 99.81 | ||
| KOG0301|consensus | 745 | 99.81 | ||
| KOG0639|consensus | 705 | 99.8 | ||
| KOG0264|consensus | 422 | 99.8 | ||
| KOG0646|consensus | 476 | 99.79 | ||
| KOG1274|consensus | 933 | 99.79 | ||
| KOG0300|consensus | 481 | 99.79 | ||
| KOG0299|consensus | 479 | 99.79 | ||
| KOG0316|consensus | 307 | 99.78 | ||
| KOG1036|consensus | 323 | 99.78 | ||
| KOG1408|consensus | 1080 | 99.77 | ||
| KOG1408|consensus | 1080 | 99.77 | ||
| KOG1273|consensus | 405 | 99.77 | ||
| KOG4283|consensus | 397 | 99.76 | ||
| KOG0305|consensus | 484 | 99.75 | ||
| KOG4328|consensus | 498 | 99.75 | ||
| KOG2055|consensus | 514 | 99.75 | ||
| KOG0308|consensus | 735 | 99.75 | ||
| KOG0640|consensus | 430 | 99.74 | ||
| KOG0267|consensus | 825 | 99.74 | ||
| KOG0283|consensus | 712 | 99.74 | ||
| KOG1063|consensus | 764 | 99.74 | ||
| KOG1446|consensus | 311 | 99.74 | ||
| KOG1539|consensus | 910 | 99.74 | ||
| KOG0647|consensus | 347 | 99.74 | ||
| KOG0270|consensus | 463 | 99.74 | ||
| KOG0294|consensus | 362 | 99.74 | ||
| KOG0643|consensus | 327 | 99.72 | ||
| KOG2048|consensus | 691 | 99.72 | ||
| KOG2096|consensus | 420 | 99.72 | ||
| KOG0289|consensus | 506 | 99.72 | ||
| KOG1332|consensus | 299 | 99.71 | ||
| KOG0307|consensus | 1049 | 99.69 | ||
| KOG4328|consensus | 498 | 99.68 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.68 | |
| KOG2106|consensus | 626 | 99.68 | ||
| KOG2106|consensus | 626 | 99.68 | ||
| KOG2048|consensus | 691 | 99.67 | ||
| KOG0321|consensus | 720 | 99.66 | ||
| KOG1539|consensus | 910 | 99.66 | ||
| KOG0646|consensus | 476 | 99.65 | ||
| KOG0268|consensus | 433 | 99.65 | ||
| KOG0303|consensus | 472 | 99.65 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.64 | |
| KOG1007|consensus | 370 | 99.63 | ||
| KOG1310|consensus | 758 | 99.63 | ||
| KOG2919|consensus | 406 | 99.63 | ||
| KOG0642|consensus | 577 | 99.63 | ||
| KOG1034|consensus | 385 | 99.62 | ||
| KOG1034|consensus | 385 | 99.61 | ||
| KOG1009|consensus | 434 | 99.6 | ||
| KOG0650|consensus | 733 | 99.6 | ||
| KOG0303|consensus | 472 | 99.6 | ||
| KOG4227|consensus | 609 | 99.6 | ||
| KOG0639|consensus | 705 | 99.59 | ||
| KOG1036|consensus | 323 | 99.59 | ||
| KOG0307|consensus | 1049 | 99.58 | ||
| KOG1274|consensus | 933 | 99.57 | ||
| KOG0290|consensus | 364 | 99.56 | ||
| KOG0649|consensus | 325 | 99.56 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.55 | |
| KOG0644|consensus | 1113 | 99.55 | ||
| KOG0771|consensus | 398 | 99.54 | ||
| KOG1963|consensus | 792 | 99.54 | ||
| KOG1445|consensus | 1012 | 99.54 | ||
| KOG0302|consensus | 440 | 99.53 | ||
| KOG0270|consensus | 463 | 99.52 | ||
| KOG4378|consensus | 673 | 99.52 | ||
| KOG2055|consensus | 514 | 99.52 | ||
| KOG4378|consensus | 673 | 99.5 | ||
| KOG1009|consensus | 434 | 99.5 | ||
| KOG1524|consensus | 737 | 99.48 | ||
| KOG1334|consensus | 559 | 99.48 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.48 | |
| KOG1445|consensus | 1012 | 99.47 | ||
| KOG1538|consensus | 1081 | 99.47 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.46 | |
| KOG1188|consensus | 376 | 99.46 | ||
| KOG1517|consensus | 1387 | 99.44 | ||
| KOG2445|consensus | 361 | 99.44 | ||
| KOG1007|consensus | 370 | 99.44 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.41 | |
| KOG1188|consensus | 376 | 99.38 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.38 | |
| KOG1587|consensus | 555 | 99.38 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.36 | |
| KOG1523|consensus | 361 | 99.35 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.34 | |
| KOG2110|consensus | 391 | 99.32 | ||
| KOG2919|consensus | 406 | 99.32 | ||
| KOG1273|consensus | 405 | 99.3 | ||
| KOG0322|consensus | 323 | 99.28 | ||
| KOG2110|consensus | 391 | 99.21 | ||
| KOG0642|consensus | 577 | 99.21 | ||
| KOG1524|consensus | 737 | 99.21 | ||
| KOG0650|consensus | 733 | 99.19 | ||
| KOG1240|consensus | 1431 | 99.18 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.18 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.16 | |
| KOG1272|consensus | 545 | 99.16 | ||
| KOG4497|consensus | 447 | 99.14 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.14 | |
| KOG1517|consensus | 1387 | 99.13 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.12 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.11 | |
| KOG0290|consensus | 364 | 99.09 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.09 | |
| KOG0309|consensus | 1081 | 99.08 | ||
| KOG1963|consensus | 792 | 99.08 | ||
| KOG2394|consensus | 636 | 99.03 | ||
| KOG1310|consensus | 758 | 99.01 | ||
| KOG0644|consensus | 1113 | 99.0 | ||
| KOG0649|consensus | 325 | 98.99 | ||
| KOG1538|consensus | 1081 | 98.97 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 98.97 | |
| KOG2111|consensus | 346 | 98.94 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 98.93 | |
| KOG4227|consensus | 609 | 98.93 | ||
| KOG0322|consensus | 323 | 98.92 | ||
| KOG2111|consensus | 346 | 98.91 | ||
| KOG2394|consensus | 636 | 98.9 | ||
| KOG4547|consensus | 541 | 98.89 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 98.89 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.88 | |
| KOG2139|consensus | 445 | 98.88 | ||
| KOG3881|consensus | 412 | 98.87 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 98.85 | |
| KOG0974|consensus | 967 | 98.84 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 98.84 | |
| KOG2321|consensus | 703 | 98.83 | ||
| KOG1240|consensus | 1431 | 98.83 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 98.8 | |
| KOG0974|consensus | 967 | 98.8 | ||
| KOG3881|consensus | 412 | 98.76 | ||
| KOG1587|consensus | 555 | 98.76 | ||
| KOG3914|consensus | 390 | 98.75 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.75 | |
| KOG0771|consensus | 398 | 98.73 | ||
| KOG4497|consensus | 447 | 98.69 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.67 | |
| KOG1523|consensus | 361 | 98.64 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 98.61 | |
| KOG2139|consensus | 445 | 98.6 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.6 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.51 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 98.49 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.45 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.44 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.4 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.39 | |
| KOG0309|consensus | 1081 | 98.37 | ||
| KOG0280|consensus | 339 | 98.33 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.3 | |
| KOG2315|consensus | 566 | 98.29 | ||
| KOG0280|consensus | 339 | 98.29 | ||
| KOG2041|consensus | 1189 | 98.27 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.26 | |
| KOG3914|consensus | 390 | 98.23 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 98.22 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.19 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.15 | |
| KOG1272|consensus | 545 | 98.14 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.09 | |
| KOG4190|consensus | 1034 | 97.98 | ||
| KOG1064|consensus | 2439 | 97.95 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 97.94 | |
| KOG4532|consensus | 344 | 97.91 | ||
| KOG0882|consensus | 558 | 97.87 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 97.85 | |
| KOG2321|consensus | 703 | 97.83 | ||
| KOG1334|consensus | 559 | 97.82 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 97.81 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.79 | |
| KOG1064|consensus | 2439 | 97.77 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.76 | |
| KOG1409|consensus | 404 | 97.72 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 97.67 | |
| KOG4547|consensus | 541 | 97.64 | ||
| KOG2695|consensus | 425 | 97.63 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 97.6 | |
| KOG4532|consensus | 344 | 97.58 | ||
| KOG1409|consensus | 404 | 97.55 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 97.53 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.47 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 97.4 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.37 | |
| KOG4714|consensus | 319 | 97.21 | ||
| KOG2315|consensus | 566 | 97.2 | ||
| KOG4190|consensus | 1034 | 97.19 | ||
| KOG1832|consensus | 1516 | 97.18 | ||
| KOG2695|consensus | 425 | 97.18 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.17 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 97.15 | |
| KOG4714|consensus | 319 | 97.02 | ||
| KOG1008|consensus | 783 | 96.85 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 96.76 | |
| KOG0882|consensus | 558 | 96.69 | ||
| KOG1832|consensus | 1516 | 96.69 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 96.68 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.6 | |
| KOG1920|consensus | 1265 | 96.54 | ||
| KOG2114|consensus | 933 | 96.47 | ||
| KOG1645|consensus | 463 | 96.24 | ||
| KOG2066|consensus | 846 | 96.22 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 96.13 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 96.13 | |
| KOG2314|consensus | 698 | 96.12 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.09 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 96.04 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 95.97 | |
| KOG1912|consensus | 1062 | 95.88 | ||
| KOG2314|consensus | 698 | 95.81 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 95.74 | |
| KOG1920|consensus | 1265 | 95.68 | ||
| KOG1275|consensus | 1118 | 95.66 | ||
| KOG2041|consensus | 1189 | 95.63 | ||
| KOG2066|consensus | 846 | 95.24 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 95.12 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 95.07 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 94.98 | |
| KOG1912|consensus | 1062 | 94.61 | ||
| KOG3617|consensus | 1416 | 94.47 | ||
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 93.89 | |
| KOG1275|consensus | 1118 | 93.76 | ||
| KOG1008|consensus | 783 | 93.73 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 93.71 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.14 | |
| KOG4640|consensus | 665 | 93.05 | ||
| KOG1645|consensus | 463 | 92.9 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 92.86 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 92.62 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 92.61 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 92.53 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 92.39 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 92.32 | |
| KOG3617|consensus | 1416 | 92.31 | ||
| KOG3621|consensus | 726 | 91.9 | ||
| KOG4640|consensus | 665 | 91.84 | ||
| KOG2079|consensus | 1206 | 91.68 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 91.51 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 91.49 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 91.48 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 90.77 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 90.34 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 88.77 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 88.63 | |
| KOG2079|consensus | 1206 | 88.03 | ||
| KOG3621|consensus | 726 | 87.84 | ||
| KOG2444|consensus | 238 | 87.59 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 86.88 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 86.47 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 86.09 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 83.97 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 83.47 | |
| KOG2395|consensus | 644 | 82.93 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 81.6 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 81.34 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 81.13 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 80.64 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 80.33 |
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=309.84 Aligned_cols=289 Identities=17% Similarity=0.287 Sum_probs=230.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.|++|||+|++|||||.|.++|+||.++.. ++.+.++|. .+|.+|+|+||+.
T Consensus 116 e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT-----------p~~t~KgH~------------~WVlcvawsPDgk-- 170 (480)
T KOG0271|consen 116 EAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET-----------PLFTCKGHK------------NWVLCVAWSPDGK-- 170 (480)
T ss_pred CcEEEEEecCCCceEEecCCCceEEeeccCCCC-----------cceeecCCc------------cEEEEEEECCCcc--
Confidence 468999999999999999999999999998642 356788997 6899999999985
Q ss_pred eEEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCC----CCEEEEEeCCCeEEEEecccccccccccceeccC
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPID----CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEG 154 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~----~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~ 154 (400)
.+++++.||+|+|||.++|+ +.+|...|++++|.|-+ +.+|||+|.||+|+|||+..+. |+..+
T Consensus 171 ~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~-------~~~~l 243 (480)
T KOG0271|consen 171 KIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT-------CVRTL 243 (480)
T ss_pred hhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce-------EEEEe
Confidence 77788999999999998887 46788899999998753 5689999999999999998873 33332
Q ss_pred cc------cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeE
Q psy12356 155 TN------CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 155 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
.+ |..|+ .. -...+++.|++||+|+...+.++. . +.+|..+|+
T Consensus 244 sgHT~~VTCvrwG--------------G~-gliySgS~DrtIkvw~a~dG~~~r----~------------lkGHahwvN 292 (480)
T KOG0271|consen 244 SGHTASVTCVRWG--------------GE-GLIYSGSQDRTIKVWRALDGKLCR----E------------LKGHAHWVN 292 (480)
T ss_pred ccCccceEEEEEc--------------CC-ceEEecCCCceEEEEEccchhHHH----h------------hcccchhee
Confidence 22 11221 12 234567899999999999887652 2 347878888
Q ss_pred EEEEC-----------CCCc-------------------------EEEEe-cCCeEEEEeCCCCCCceeeecCCC-----
Q psy12356 229 DVKIS-----------NSGR-------------------------YMISR-DYLCVKVWDLHMESRPVETYPTHT----- 266 (400)
Q Consensus 229 ~v~fS-----------pdg~-------------------------~las~-~D~tIklWD~~~~~~~l~~~~~h~----- 266 (400)
.++.| |.|+ .|+|+ +|.++-||+-....+|+..+.||+
T Consensus 293 ~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~ 372 (480)
T KOG0271|consen 293 HLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNH 372 (480)
T ss_pred eeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheee
Confidence 88877 3343 48875 679999999888778999999996
Q ss_pred --cCCCCccc-CCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccc----hh---------
Q psy12356 267 --KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRG----IF--------- 330 (400)
Q Consensus 267 --~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~----~~--------- 330 (400)
++|||+++ +++.|.+||||+-.. |+....| .||-..|..+++|.|.+++++.++. +|
T Consensus 373 V~fSPd~r~IASaSFDkSVkLW~g~t------Gk~lasf-RGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~ 445 (480)
T KOG0271|consen 373 VSFSPDGRYIASASFDKSVKLWDGRT------GKFLASF-RGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQ 445 (480)
T ss_pred EEECCCccEEEEeecccceeeeeCCC------cchhhhh-hhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecc
Confidence 68999986 589999999997532 2222223 5799999999999999999875542 11
Q ss_pred -hcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 331 -ADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 331 -~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
.+||.+.|..+.|||||+.++|+ .|..+|+|.
T Consensus 446 DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 446 DLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred cCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 36999999999999999999997 599999995
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=312.43 Aligned_cols=264 Identities=20% Similarity=0.279 Sum_probs=211.5
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
-|..+.||+||+.|||||.+|.++||+.+.. ..+.+|.||+. .|.++.|+|...+..
T Consensus 177 Pis~~~fS~ds~~laT~swsG~~kvW~~~~~-----------~~~~~l~gH~~------------~v~~~~fhP~~~~~~ 233 (459)
T KOG0272|consen 177 PISGCSFSRDSKHLATGSWSGLVKVWSVPQC-----------NLLQTLRGHTS------------RVGAAVFHPVDSDLN 233 (459)
T ss_pred cceeeEeecCCCeEEEeecCCceeEeecCCc-----------ceeEEEecccc------------ceeeEEEccCCCccc
Confidence 4778999999999999999999999999752 35679999984 589999999743457
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc---ccccceeccCccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC---DRHSKCLIEGTNC 157 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~---~~~~~~~~~~~~~ 157 (400)
+++++.||+++||++.+.. +.+|...|..|+|||+| ++|+|++.|.+.+|||++++..+ .+|.+.+
T Consensus 234 lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG-~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v------ 306 (459)
T KOG0272|consen 234 LATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSG-KFLGTASFDSTWRLWDLETKSELLLQEGHSKGV------ 306 (459)
T ss_pred eeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCC-ceeeecccccchhhcccccchhhHhhccccccc------
Confidence 8889999999999998743 56788889999999985 79999999999999999998542 2333322
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
+++ .+.+++-..++|+.|..-|+||+|++.+.. + +.+|..+|.+|+|||+|.
T Consensus 307 --~~i----------af~~DGSL~~tGGlD~~~RvWDlRtgr~im----~------------L~gH~k~I~~V~fsPNGy 358 (459)
T KOG0272|consen 307 --FSI----------AFQPDGSLAATGGLDSLGRVWDLRTGRCIM----F------------LAGHIKEILSVAFSPNGY 358 (459)
T ss_pred --cee----------EecCCCceeeccCccchhheeecccCcEEE----E------------ecccccceeeEeECCCce
Confidence 122 234778888999999999999999987531 1 458999999999999999
Q ss_pred EEEEe-cCCeEEEEeCCCCCCceeeecCCCc-------CC-CCccc-CCCCCceeecCcccccceeeccCccceeccccc
Q psy12356 238 YMISR-DYLCVKVWDLHMESRPVETYPTHTK-------EE-NGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHT 307 (400)
Q Consensus 238 ~las~-~D~tIklWD~~~~~~~l~~~~~h~~-------~~-~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (400)
.||++ +|+++||||+++. .++.++.+|++ .| .|.++ +++.|.++++|.-... +
T Consensus 359 ~lATgs~Dnt~kVWDLR~r-~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~------~---------- 421 (459)
T KOG0272|consen 359 HLATGSSDNTCKVWDLRMR-SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW------S---------- 421 (459)
T ss_pred EEeecCCCCcEEEeeeccc-ccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCc------c----------
Confidence 99975 7999999999986 46899999973 44 45554 5777888877742110 0
Q ss_pred cceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 308 YHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 308 ~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
+.+. ..||.+.|.+++.||||++++|+ .|+|||+|.
T Consensus 422 ------------------~~ks-LaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 422 ------------------PLKS-LAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred ------------------cchh-hcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 0111 15999999999999999999997 699999996
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=277.58 Aligned_cols=275 Identities=16% Similarity=0.184 Sum_probs=199.6
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc--CCc
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK--NQA 83 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~--~~~ 83 (400)
|.||+|||||+.||||+.||+|++||..+++ ...++|.+|. ++|++++|.|-+ +.+
T Consensus 160 VlcvawsPDgk~iASG~~dg~I~lwdpktg~----------~~g~~l~gH~------------K~It~Lawep~hl~p~~ 217 (480)
T KOG0271|consen 160 VLCVAWSPDGKKIASGSKDGSIRLWDPKTGQ----------QIGRALRGHK------------KWITALAWEPLHLVPPC 217 (480)
T ss_pred EEEEEECCCcchhhccccCCeEEEecCCCCC----------cccccccCcc------------cceeEEeecccccCCCc
Confidence 7899999999999999999999999987653 2356889997 579999998865 233
Q ss_pred -eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccce---eccCc
Q psy12356 84 -HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKC---LIEGT 155 (400)
Q Consensus 84 -~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~---~~~~~ 155 (400)
+++++|.||+|+|||+..+. +.+|+..|++|.|-.+ .++.|+|.|++||+|+...|.+++....+ +..+.
T Consensus 218 r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~--gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~la 295 (480)
T KOG0271|consen 218 RRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE--GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLA 295 (480)
T ss_pred cceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC--ceEEecCCCceEEEEEccchhHHHhhcccchheeeee
Confidence 45567899999999998876 3578899999999764 48999999999999999998654432221 11111
Q ss_pred ccceece----------e---ccCchh-----hhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCc
Q psy12356 156 NCNCQGL----------I---VPESKR-----EERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNK 217 (400)
Q Consensus 156 ~~~~~~~----------~---~~~~~~-----~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 217 (400)
-...+-+ . +++.+. ++......+-...+++.|.++.||+-...+.+ +
T Consensus 296 lsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkp---i------------ 360 (480)
T KOG0271|consen 296 LSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKP---I------------ 360 (480)
T ss_pred ccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccc---h------------
Confidence 0000000 0 000000 00000111122556778999999987654321 1
Q ss_pred ccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCccc
Q psy12356 218 SFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIK 288 (400)
Q Consensus 218 ~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~ 288 (400)
..+.+|+..|+.|.||||++++||+ -|++|||||.+++. -|.+|+||. ++.|.+++ +.+.|+++|+|++.
T Consensus 361 ~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk-~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~ 439 (480)
T KOG0271|consen 361 TRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGK-FLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVR 439 (480)
T ss_pred hhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcc-hhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEee
Confidence 1245899999999999999999986 59999999999985 588999994 45666654 68999999999985
Q ss_pred ccceeeccCccceeccccccceEEEEEcCCCcEEeeccc
Q psy12356 289 PIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR 327 (400)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~ 327 (400)
..... .-+.||...|..+.++|||+++++.++
T Consensus 440 tkKl~-------~DLpGh~DEVf~vDwspDG~rV~sggk 471 (480)
T KOG0271|consen 440 TKKLK-------QDLPGHADEVFAVDWSPDGQRVASGGK 471 (480)
T ss_pred eeeec-------ccCCCCCceEEEEEecCCCceeecCCC
Confidence 43321 123689999999999999999987665
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=245.26 Aligned_cols=282 Identities=13% Similarity=0.138 Sum_probs=203.1
Q ss_pred eeeEEEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 3 VYMREASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 3 ~~~v~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+.|..++..+. .+.|.+++.|.+|.+|++..... ++ ..+.+.|.||+ ..|+.+..++|++
T Consensus 15 ~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~----~~--G~~~r~~~GHs------------H~v~dv~~s~dg~ 76 (315)
T KOG0279|consen 15 TDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDI----KY--GVPVRRLTGHS------------HFVSDVVLSSDGN 76 (315)
T ss_pred CceEEEEEeecCCCceEEEcccceEEEEEEeccCcc----cc--Cceeeeeeccc------------eEecceEEccCCc
Confidence 467899999885 67999999999999999876421 11 24577899997 4599999999985
Q ss_pred CceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
..++++.|+++|+||+.+|+ +.+|+..|.+|+|+||+ ..++|||.|.||++|++-.+ |..+....
T Consensus 77 --~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn-~qivSGSrDkTiklwnt~g~--------ck~t~~~~ 145 (315)
T KOG0279|consen 77 --FALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDN-RQIVSGSRDKTIKLWNTLGV--------CKYTIHED 145 (315)
T ss_pred --eEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCC-ceeecCCCcceeeeeeeccc--------EEEEEecC
Confidence 66778999999999999876 46788999999999985 78999999999999998876 22211100
Q ss_pred --ceeceeccCchhhhhhcccC--cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 158 --NCQGLIVPESKREERQSSQN--RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 158 --~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
..|- ..+.++|+ .+..++++.|+++|+||+++-+. ++.+.+|++.++.|++|
T Consensus 146 ~~~~WV--------scvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l----------------~~~~~gh~~~v~t~~vS 201 (315)
T KOG0279|consen 146 SHREWV--------SCVRFSPNESNPIIVSASWDKTVKVWNLRNCQL----------------RTTFIGHSGYVNTVTVS 201 (315)
T ss_pred CCcCcE--------EEEEEcCCCCCcEEEEccCCceEEEEccCCcch----------------hhccccccccEEEEEEC
Confidence 1111 11233454 46677888999999999997443 22345899999999999
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC------cCCCCcccCCCCCceeecCcccccceeeccCccceecccc
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT------KEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
|||.+++++ .|+.+.|||++.+. +++++++-. |+|+.-.+++.-..+|++|+..+.....
T Consensus 202 pDGslcasGgkdg~~~LwdL~~~k-~lysl~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~------------ 268 (315)
T KOG0279|consen 202 PDGSLCASGGKDGEAMLWDLNEGK-NLYSLEAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVE------------ 268 (315)
T ss_pred CCCCEEecCCCCceEEEEEccCCc-eeEeccCCCeEeeEEecCCceeEeeccCCceEEEeccchhhhh------------
Confidence 999999986 58999999999864 577775432 5565544544455668888764332211
Q ss_pred ccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 307 TYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 307 ~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
.+++|+ ++.. ..+-.....+++||+||+.|.++ .|+.||+|++.
T Consensus 269 -------~l~~d~---~g~s----~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 269 -------ELKLDG---IGPS----SKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred -------hccccc---cccc----cccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 011111 0000 01123345689999999999999 59999999874
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=244.28 Aligned_cols=268 Identities=17% Similarity=0.198 Sum_probs=192.9
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
-++|+.+.|+|||.++|||+.|..|.||++.+.. +-..++.+|..+ |..|.|.+|++
T Consensus 47 ~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdc----------eN~~~lkgHsgA------------VM~l~~~~d~s- 103 (338)
T KOG0265|consen 47 KGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDC----------ENFWVLKGHSGA------------VMELHGMRDGS- 103 (338)
T ss_pred cceEEEEEECCCCCeEeecCCcceEEEEeccccc----------cceeeeccccce------------eEeeeeccCCC-
Confidence 3789999999999999999999999999987543 223467799854 99999999875
Q ss_pred ceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc-c
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN-C 157 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~-~ 157 (400)
++++++.|++++.||+++|+ ++.|...|+++.-.-.|..++.|++.|+++||||+|+....+ +..+ .
T Consensus 104 -~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~-------t~~~ky 175 (338)
T KOG0265|consen 104 -HILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIK-------TFENKY 175 (338)
T ss_pred -EEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhh-------ccccce
Confidence 88899999999999999997 356788899888555567789999999999999999873322 2211 0
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
....+.+ .+..-.+.+|.-|+.|++||+|..... ..++||...|..+..||+|.
T Consensus 176 qltAv~f----------~d~s~qv~sggIdn~ikvWd~r~~d~~----------------~~lsGh~DtIt~lsls~~gs 229 (338)
T KOG0265|consen 176 QLTAVGF----------KDTSDQVISGGIDNDIKVWDLRKNDGL----------------YTLSGHADTITGLSLSRYGS 229 (338)
T ss_pred eEEEEEe----------cccccceeeccccCceeeeccccCcce----------------EEeecccCceeeEEeccCCC
Confidence 0011111 122333556678999999999875431 22468999999999999999
Q ss_pred EEEE-ecCCeEEEEeCCCC---CCceeeecCCCc-----------CCCCccc-CCCCCceeecCcccccceeeccCccce
Q psy12356 238 YMIS-RDYLCVKVWDLHME---SRPVETYPTHTK-----------EENGQLR-DPSNITALRVPQIKPIELTVEASPRRI 301 (400)
Q Consensus 238 ~las-~~D~tIklWD~~~~---~~~l~~~~~h~~-----------~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~ 301 (400)
++.+ +-|.++|+||++.- .+|++.|.+|.. .|++..+ +.+.+..+-+|+.
T Consensus 230 ~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~-------------- 295 (338)
T KOG0265|consen 230 FLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDT-------------- 295 (338)
T ss_pred ccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeec--------------
Confidence 9998 56999999999964 346888888742 1222211 1111222211110
Q ss_pred eccccccceEEEEEcCCCcEEeecccchh-hcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 302 FANAHTYHINSISVNSDQLTVEASPRGIF-ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 302 ~~~~~~~~i~~i~~s~dg~~~~~~~~~~~-~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
. ...-+| .+||.+.|+.++|+|...+|.|+ .|.+|.+=++
T Consensus 296 ----------------~------~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lgei 337 (338)
T KOG0265|consen 296 ----------------T------SRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGEI 337 (338)
T ss_pred ----------------c------cccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeecc
Confidence 0 000112 37999999999999999999997 6999977443
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=263.47 Aligned_cols=226 Identities=15% Similarity=0.181 Sum_probs=182.7
Q ss_pred eeeEEEEEECCC--CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 3 VYMREASQRFSD--GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 3 ~~~v~~v~fspd--G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
+..|.++.|+|. +..||||+.||+|++|+++.. .++..|.+|.+ +|..|+|+|+|
T Consensus 217 ~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e-----------~~l~~l~gH~~------------RVs~VafHPsG 273 (459)
T KOG0272|consen 217 TSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE-----------TPLQDLEGHLA------------RVSRVAFHPSG 273 (459)
T ss_pred ccceeeEEEccCCCccceeeeccCCceeeeccCCC-----------cchhhhhcchh------------hheeeeecCCC
Confidence 356889999996 779999999999999999853 34678889974 58999999988
Q ss_pred CCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 81 NQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 81 ~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
. .++++|.|.+.||||+.++. .++|...|.+++|+||| .+++|||.|..-||||+|++ .|+..+.+
T Consensus 274 ~--~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DG-SL~~tGGlD~~~RvWDlRtg-------r~im~L~g 343 (459)
T KOG0272|consen 274 K--FLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDG-SLAATGGLDSLGRVWDLRTG-------RCIMFLAG 343 (459)
T ss_pred c--eeeecccccchhhcccccchhhHhhcccccccceeEecCCC-ceeeccCccchhheeecccC-------cEEEEecc
Confidence 4 55568999999999999887 36788899999999985 89999999999999999999 44444433
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC-C
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN-S 235 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp-d 235 (400)
+.... ..+.++|+++..++++.|+++|+||+|..... +.+.+|++.|+.|+|+| .
T Consensus 344 H~k~I--------~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~l----------------y~ipAH~nlVS~Vk~~p~~ 399 (459)
T KOG0272|consen 344 HIKEI--------LSVAFSPNGYHLATGSSDNTCKVWDLRMRSEL----------------YTIPAHSNLVSQVKYSPQE 399 (459)
T ss_pred cccce--------eeEeECCCceEEeecCCCCcEEEeeecccccc----------------eecccccchhhheEecccC
Confidence 21111 12345699999999999999999999976531 22458999999999999 6
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCcc-cCCCCCceeecCc
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQL-RDPSNITALRVPQ 286 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~-~~~~~~~~i~l~~ 286 (400)
|++|+++ -|+++|||...+. .|++.+.||+ ..+||++ ++.+.|.++|||.
T Consensus 400 g~fL~TasyD~t~kiWs~~~~-~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 400 GYFLVTASYDNTVKIWSTRTW-SPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CeEEEEcccCcceeeecCCCc-ccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 8889975 5999999999986 5899999996 3467764 3577888888874
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-32 Score=241.36 Aligned_cols=239 Identities=21% Similarity=0.308 Sum_probs=188.7
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
=|..++|+|.|+++|+|+.|..+.||++.... .++.-++.+.+.+|+. -+.+++|.+|+ +
T Consensus 99 WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d-----~~g~~~v~r~l~gHtg------------ylScC~f~dD~---~ 158 (343)
T KOG0286|consen 99 WVMTCAYSPSGNFVACGGLDNKCSIYPLSTRD-----AEGNVRVSRELAGHTG------------YLSCCRFLDDN---H 158 (343)
T ss_pred eEEEEEECCCCCeEEecCcCceeEEEeccccc-----ccccceeeeeecCccc------------eeEEEEEcCCC---c
Confidence 47899999999999999999999999987532 1233345677889984 37889998754 8
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
++++|.|.|..|||+++|+ +.+|.+.|.+++++|.+.++|+||+.|++.+|||+|.+...+.+..+
T Consensus 159 ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~gh---------- 228 (343)
T KOG0286|consen 159 ILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGH---------- 228 (343)
T ss_pred eEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccc----------
Confidence 9999999999999999987 46788999999999965799999999999999999999433332221
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
++..+.+.+.|++.+.++++.|+++|+||+|.... +..|+.+ .-..+|++|+||-.|++|.
T Consensus 229 -----esDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~----~a~ys~~----------~~~~gitSv~FS~SGRlLf 289 (343)
T KOG0286|consen 229 -----ESDINSVRFFPSGDAFATGSDDATCRLYDLRADQE----LAVYSHD----------SIICGITSVAFSKSGRLLF 289 (343)
T ss_pred -----ccccceEEEccCCCeeeecCCCceeEEEeecCCcE----EeeeccC----------cccCCceeEEEcccccEEE
Confidence 22234456678999999999999999999997433 3344321 1135799999999999998
Q ss_pred E-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCC
Q psy12356 241 S-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQ 319 (400)
Q Consensus 241 s-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg 319 (400)
+ ..|.++.+||.-.+.. +..
T Consensus 290 agy~d~~c~vWDtlk~e~-vg~---------------------------------------------------------- 310 (343)
T KOG0286|consen 290 AGYDDFTCNVWDTLKGER-VGV---------------------------------------------------------- 310 (343)
T ss_pred eeecCCceeEeeccccce-EEE----------------------------------------------------------
Confidence 7 4799999999864321 100
Q ss_pred cEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 320 LTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 320 ~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
..||.+.|++|..+|||..++|+ .|.++|||.
T Consensus 311 -----------L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 311 -----------LAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred -----------eeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 02788899999999999999997 699999994
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=270.98 Aligned_cols=245 Identities=20% Similarity=0.254 Sum_probs=187.4
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCC----ccc-----cCC-----------CCcceeeeeeeccCcchhhcccc
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLS----KTS-----IPK-----------RGEYNVYSTFQSHEPEFDYLKSL 65 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~----~~~-----~~~-----------~~~~~~~~~~~~h~~~~~~~~~~ 65 (400)
++|..||+|+.+||.|-.|-.|++|.++... +.+ +.+ ....-..+++.||+
T Consensus 381 v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~--------- 451 (707)
T KOG0263|consen 381 VTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHS--------- 451 (707)
T ss_pred ceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCC---------
Confidence 6899999999999999999999999987311 000 000 00000123345554
Q ss_pred cccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 66 EIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 66 ~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+.|..++|+|+.+ .++++|.|++||||.+.+.. .++|..+|+.|+|+|.| .+|||+|.|++.++|.....
T Consensus 452 ---GPVyg~sFsPd~r--fLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G-yYFatas~D~tArLWs~d~~ 525 (707)
T KOG0263|consen 452 ---GPVYGCSFSPDRR--FLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG-YYFATASHDQTARLWSTDHN 525 (707)
T ss_pred ---Cceeeeeeccccc--ceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCc-eEEEecCCCceeeeeecccC
Confidence 6799999999863 55567899999999999876 36889999999999985 79999999999999998876
Q ss_pred cccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 142 ALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
.-.+-+-.+. +..+++.+.|+....++|+.|.++|+||+.+|.. .+. |.
T Consensus 526 ~PlRifaghl---------------sDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~----VRi------------F~ 574 (707)
T KOG0263|consen 526 KPLRIFAGHL---------------SDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS----VRI------------FT 574 (707)
T ss_pred Cchhhhcccc---------------cccceEEECCcccccccCCCCceEEEEEcCCCcE----EEE------------ec
Confidence 3222211111 1124456678888888999999999999998753 333 45
Q ss_pred ccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccc
Q psy12356 222 EIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRR 300 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~ 300 (400)
||.++|.+|+|||+|++||++ .|+.|+|||+.++. ++..+
T Consensus 575 GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~-~v~~l-------------------------------------- 615 (707)
T KOG0263|consen 575 GHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGS-LVKQL-------------------------------------- 615 (707)
T ss_pred CCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCc-chhhh--------------------------------------
Confidence 899999999999999999986 68999999999753 33322
Q ss_pred eeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccC
Q psy12356 301 IFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEIT 366 (400)
Q Consensus 301 ~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~ 366 (400)
.||++.|++|.||.||..||++ .|++|++||+...
T Consensus 616 -------------------------------~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 616 -------------------------------KGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred -------------------------------hcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 2567778899999999999997 6999999998643
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=225.55 Aligned_cols=262 Identities=18% Similarity=0.243 Sum_probs=190.7
Q ss_pred CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCe
Q psy12356 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQS 93 (400)
Q Consensus 14 dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~t 93 (400)
+.-+|||+|-|.+||+|...++ ++.++++... ..|+.+...|++ ++|+++....
T Consensus 9 ~~viLvsA~YDhTIRfWqa~tG-----------~C~rTiqh~d------------sqVNrLeiTpdk---~~LAaa~~qh 62 (311)
T KOG0315|consen 9 DPVILVSAGYDHTIRFWQALTG-----------ICSRTIQHPD------------SQVNRLEITPDK---KDLAAAGNQH 62 (311)
T ss_pred CceEEEeccCcceeeeeehhcC-----------eEEEEEecCc------------cceeeEEEcCCc---chhhhccCCe
Confidence 4468999999999999998764 4567776432 459999999986 6777677789
Q ss_pred EEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCc
Q psy12356 94 FNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPES 167 (400)
Q Consensus 94 I~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (400)
|||+|+.++. +..|+..|++|.|+.+| ..+.+||+||++||||+|.... -+.+.. .+
T Consensus 63 vRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dg-rWMyTgseDgt~kIWdlR~~~~-------qR~~~~---------~s 125 (311)
T KOG0315|consen 63 VRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDG-RWMYTGSEDGTVKIWDLRSLSC-------QRNYQH---------NS 125 (311)
T ss_pred eEEEEccCCCCCceeEEeccCCceEEEEEeecC-eEEEecCCCceEEEEeccCccc-------chhccC---------CC
Confidence 9999998876 34677889999999985 7889999999999999998621 111110 01
Q ss_pred hhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEec-CCe
Q psy12356 168 KREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRD-YLC 246 (400)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~-D~t 246 (400)
+.+.+...|+.....++..+|.|++||++.-.+... +. | +...+|.++...|||++|++.+ -|+
T Consensus 126 pVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~----li-P----------e~~~~i~sl~v~~dgsml~a~nnkG~ 190 (311)
T KOG0315|consen 126 PVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHE----LI-P----------EDDTSIQSLTVMPDGSMLAAANNKGN 190 (311)
T ss_pred CcceEEecCCcceEEeecCCCcEEEEEccCCccccc----cC-C----------CCCcceeeEEEcCCCcEEEEecCCcc
Confidence 122233346665556666899999999987543211 11 1 2235799999999999999875 599
Q ss_pred EEEEeCCCCC-----CceeeecCCC-------cCCCCcccC-CCCCceeecCcccccceeeccCccceeccccccceEEE
Q psy12356 247 VKVWDLHMES-----RPVETYPTHT-------KEENGQLRD-PSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSI 313 (400)
Q Consensus 247 IklWD~~~~~-----~~l~~~~~h~-------~~~~g~~~~-~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 313 (400)
..+|++-+.. .|+..|++|+ ++|++++++ .+.+.++++|+.... +.. .
T Consensus 191 cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~---~kl---------------e- 251 (311)
T KOG0315|consen 191 CYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF---FKL---------------E- 251 (311)
T ss_pred EEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc---eee---------------E-
Confidence 9999987642 3666777775 467888764 677788887765322 000 0
Q ss_pred EEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 314 SVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 314 ~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
....||+.=+..++||.||+||+++ .|+++|+|++...+
T Consensus 252 ---------------~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k 291 (311)
T KOG0315|consen 252 ---------------LVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGK 291 (311)
T ss_pred ---------------EEeecCCceEEeeeeccCccEEEecCCCCceeecccccCc
Confidence 0014777778889999999999997 69999999998755
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-29 Score=250.87 Aligned_cols=273 Identities=22% Similarity=0.318 Sum_probs=193.1
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
...|.++.|||||++||+++.|+.+++|+..... . ..++.+.+|.. .|.+++|+|++.
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~--------~-~~~~~l~~h~~------------~v~~~~fs~d~~- 216 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIK--------S-NLLRELSGHTR------------GVSDVAFSPDGS- 216 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCCCcEEEeeccccc--------c-hhhcccccccc------------ceeeeEECCCCc-
Confidence 4568899999999999999999999999995432 0 23455677874 499999999974
Q ss_pred ceEEEeeCCCeEEEEEcc-CCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 83 AHFLLSTNDQSFNIVDIK-PTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~-~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
.+++++.|++|||||+. .+. +++|...|++++|+|++ +++++|+.|++||+||+++++... .+..+
T Consensus 217 -~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~-------~l~~h 287 (456)
T KOG0266|consen 217 -YLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVR-------KLKGH 287 (456)
T ss_pred -EEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEE-------eeecc
Confidence 66678899999999994 433 46788899999999997 899999999999999999984432 22211
Q ss_pred --ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 158 --NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 158 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
.+..+ .+.+++...++++.|+.|++||+.++... ..+.+..++ ... +++++.|||+
T Consensus 288 s~~is~~----------~f~~d~~~l~s~s~d~~i~vwd~~~~~~~--~~~~~~~~~---------~~~-~~~~~~fsp~ 345 (456)
T KOG0266|consen 288 SDGISGL----------AFSPDGNLLVSASYDGTIRVWDLETGSKL--CLKLLSGAE---------NSA-PVTSVQFSPN 345 (456)
T ss_pred CCceEEE----------EECCCCCEEEEcCCCccEEEEECCCCcee--eeecccCCC---------CCC-ceeEEEECCC
Confidence 11222 23466666666688999999999987621 011221111 112 5999999999
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcC----------CCCccc-CCCCCceeecCcccccceeeccCccceec
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHTKE----------ENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFA 303 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~----------~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~ 303 (400)
|++++++ .|+++++||++.+. ++..+.+|... +.|+++ +++.+..+++|+.
T Consensus 346 ~~~ll~~~~d~~~~~w~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~---------------- 408 (456)
T KOG0266|consen 346 GKYLLSASLDRTLKLWDLRSGK-SVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDS---------------- 408 (456)
T ss_pred CcEEEEecCCCeEEEEEccCCc-ceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeC----------------
Confidence 9999975 68999999999864 67788888532 122211 1222333332222
Q ss_pred cccccceEEEEEcCCCcEEeecccchhhccc-ccceeEEEEccCCCEEEEe---cCCeEEEEeCc
Q psy12356 304 NAHTYHINSISVNSDQLTVEASPRGIFADAH-TYHISSTSVNSDQETYLSA---DDLRINLWHLE 364 (400)
Q Consensus 304 ~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh-~~~V~~i~fspDg~~las~---~D~~i~lW~~~ 364 (400)
++- .......|| ...|..++++|...+++++ .|+.|++|..+
T Consensus 409 ------------~s~-------~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 409 ------------SSG-------GILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ------------Ccc-------chhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 110 000112588 8889999999999999995 49999999754
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=264.21 Aligned_cols=289 Identities=18% Similarity=0.213 Sum_probs=194.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|||++||+|+.|++|+||+........ .....+...+.+| ..|.+++|+|.. ..
T Consensus 484 ~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~---~~~~~~~~~~~~~-------------~~v~~l~~~~~~-~~ 546 (793)
T PLN00181 484 NLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDG---RDIHYPVVELASR-------------SKLSGICWNSYI-KS 546 (793)
T ss_pred CcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccc---cccccceEEeccc-------------CceeeEEeccCC-CC
Confidence 468999999999999999999999999976421000 0000011122222 358899999864 23
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc-cc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN-CN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~-~~ 158 (400)
.+++++.|++|+|||+.+++ +..|...|++++|+|.++.+|++|+.|++|++||++++.... .+.. ..
T Consensus 547 ~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~-------~~~~~~~ 619 (793)
T PLN00181 547 QVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIG-------TIKTKAN 619 (793)
T ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEE-------EEecCCC
Confidence 67778899999999998776 356788899999998556899999999999999998873321 1110 01
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
+..+.++ .+++...++++.||.|++||++..... .. .+.+|...|.+++|+ ++.+
T Consensus 620 v~~v~~~---------~~~g~~latgs~dg~I~iwD~~~~~~~---~~------------~~~~h~~~V~~v~f~-~~~~ 674 (793)
T PLN00181 620 ICCVQFP---------SESGRSLAFGSADHKVYYYDLRNPKLP---LC------------TMIGHSKTVSYVRFV-DSST 674 (793)
T ss_pred eEEEEEe---------CCCCCEEEEEeCCCeEEEEECCCCCcc---ce------------EecCCCCCEEEEEEe-CCCE
Confidence 1111111 234555667788999999999864321 11 134788899999997 6667
Q ss_pred EEE-ecCCeEEEEeCCCC-----CCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceecc
Q psy12356 239 MIS-RDYLCVKVWDLHME-----SRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFAN 304 (400)
Q Consensus 239 las-~~D~tIklWD~~~~-----~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~ 304 (400)
|++ +.|++|+|||++.+ ..+++.+.+|. +.++++++ +++.++.+++|+.....
T Consensus 675 lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~------------- 741 (793)
T PLN00181 675 LVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPM------------- 741 (793)
T ss_pred EEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCC-------------
Confidence 765 57999999999853 24678888886 34566654 46778888887642110
Q ss_pred ccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 305 AHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 305 ~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
.+.+..+...+.. . ......|...|.+++|+|+|++|+++ .|++|+||++
T Consensus 742 ----~~~s~~~~~~~~~-~----~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 742 ----PVLSYKFKTIDPV-S----GLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred ----ceEEEecccCCcc-c----ccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 1111111100000 0 00012567789999999999999997 6999999986
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=236.98 Aligned_cols=271 Identities=17% Similarity=0.242 Sum_probs=192.7
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|+.|.|.|+|++|++|+..|...||+.... .+...+++|. ..|.++.|++++. .
T Consensus 98 ~V~~v~WtPeGRRLltgs~SGEFtLWNg~~f-----------nFEtilQaHD------------s~Vr~m~ws~~g~--w 152 (464)
T KOG0284|consen 98 PVNVVRWTPEGRRLLTGSQSGEFTLWNGTSF-----------NFETILQAHD------------SPVRTMKWSHNGT--W 152 (464)
T ss_pred ceeeEEEcCCCceeEeecccccEEEecCcee-----------eHHHHhhhhc------------ccceeEEEccCCC--E
Confidence 5889999999999999999999999997532 1222457786 4599999999874 6
Q ss_pred EEEeeCCCeEEEEEccCCCc---c-cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM---E-ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~---~-~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
++++..+|.||+|+..-... + .|...|++++|+|.+ ..|++||.||+|+|||.+..+.-. .+.+. .|
T Consensus 153 miSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnD-skF~t~SdDg~ikiWdf~~~kee~----vL~GH----gw 223 (464)
T KOG0284|consen 153 MISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPND-SKFLTCSDDGTIKIWDFRMPKEER----VLRGH----GW 223 (464)
T ss_pred EEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCC-ceeEEecCCCeEEEEeccCCchhh----eeccC----CC
Confidence 66778899999999865442 2 244789999999975 789999999999999998773211 01110 00
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
. ...+.-.|..-.+++++.|+.|++||.|++.+.- . +.+|.+.|..+.|+|++++|+
T Consensus 224 d-------VksvdWHP~kgLiasgskDnlVKlWDprSg~cl~----t------------lh~HKntVl~~~f~~n~N~Ll 280 (464)
T KOG0284|consen 224 D-------VKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLA----T------------LHGHKNTVLAVKFNPNGNWLL 280 (464)
T ss_pred C-------cceeccCCccceeEEccCCceeEeecCCCcchhh----h------------hhhccceEEEEEEcCCCCeeE
Confidence 0 0111223444456778899999999999987631 1 236888999999999999999
Q ss_pred Ee-cCCeEEEEeCCCCCCceeeecCCCc-------CCC-Cccc-CCCCCceeecCcccccceeeccCccceeccccccce
Q psy12356 241 SR-DYLCVKVWDLHMESRPVETYPTHTK-------EEN-GQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHI 310 (400)
Q Consensus 241 s~-~D~tIklWD~~~~~~~l~~~~~h~~-------~~~-g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i 310 (400)
++ .|.++|++|+++- +.|..|++|.. +|- ..++ +++.++.+..|.+. +..
T Consensus 281 t~skD~~~kv~DiR~m-kEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~-----------------~~~-- 340 (464)
T KOG0284|consen 281 TGSKDQSCKVFDIRTM-KELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVG-----------------LEE-- 340 (464)
T ss_pred EccCCceEEEEehhHh-HHHHHhhcchhhheeeccccccccceeeccCCCceEEEecc-----------------ccc--
Confidence 84 6999999999953 35788999952 221 1111 23334444333221 000
Q ss_pred EEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 311 NSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 311 ~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
.......+|...|.+++++|=|.+||++ -|+++|.|.-..+.
T Consensus 341 ---------------p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~ 383 (464)
T KOG0284|consen 341 ---------------PLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRPG 383 (464)
T ss_pred ---------------cccCCCcccccceeeeeccccceeEeecCCCcceeeeccCCCC
Confidence 0111235899999999999999999998 49999999876654
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-28 Score=231.05 Aligned_cols=343 Identities=15% Similarity=0.203 Sum_probs=216.7
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCcc--------ccC----------------CCCcceeeeeeeccCcc
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKT--------SIP----------------KRGEYNVYSTFQSHEPE 58 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~--------~~~----------------~~~~~~~~~~~~~h~~~ 58 (400)
.+.++-.+|||.|.|||||...|+|||||....+.. ++| .+|..++.+.|.--+.
T Consensus 59 ~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG- 137 (603)
T KOG0318|consen 59 AHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSG- 137 (603)
T ss_pred cceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCC-
Confidence 367888999999999999999999999997642211 000 0122222222210000
Q ss_pred hhhcc-cccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeE
Q psy12356 59 FDYLK-SLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTI 133 (400)
Q Consensus 59 ~~~~~-~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i 133 (400)
.... -.+|++.|+++.|-|.- .-++++++.|++|.+++=.+-+ .+.|...|++|.|+||| .+|||++.||+|
T Consensus 138 -~SvGei~GhSr~ins~~~KpsR-PfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG-~~Fat~gsDgki 214 (603)
T KOG0318|consen 138 -NSVGEITGHSRRINSVDFKPSR-PFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDG-SRFATAGSDGKI 214 (603)
T ss_pred -CccceeeccceeEeeeeccCCC-ceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCC-CeEEEecCCccE
Confidence 0000 01255779999998754 4678889999999999865544 35677889999999985 899999999999
Q ss_pred EEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccccccc----------C-
Q psy12356 134 RLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALC----------D- 202 (400)
Q Consensus 134 ~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~----------~- 202 (400)
.++|=.++..+...... ..+ ...++.+ .-+|+....++.+.|.++||||+.+.++. +
T Consensus 215 ~iyDGktge~vg~l~~~-~aH-kGsIfal----------sWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dq 282 (603)
T KOG0318|consen 215 YIYDGKTGEKVGELEDS-DAH-KGSIFAL----------SWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQ 282 (603)
T ss_pred EEEcCCCccEEEEecCC-CCc-cccEEEE----------EECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhce
Confidence 99998888532211100 000 0011111 22477766777778999999999875431 1
Q ss_pred -----------------cccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCc-eeeec
Q psy12356 203 -----------------RHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRP-VETYP 263 (400)
Q Consensus 203 -----------------~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~-l~~~~ 263 (400)
+.+. |..|..+.....+.||...|+++..+||+++|.|+ -||.|.=||..++... +. =+
T Consensus 283 qvG~lWqkd~lItVSl~G~in-~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~-g~ 360 (603)
T KOG0318|consen 283 QVGCLWQKDHLITVSLSGTIN-YLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLA-GK 360 (603)
T ss_pred EEEEEEeCCeEEEEEcCcEEE-EecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccc-cc
Confidence 1111 11222222223467999999999999999999986 5899999999887421 10 01
Q ss_pred CCCc----------------------------------------------------------------------------
Q psy12356 264 THTK---------------------------------------------------------------------------- 267 (400)
Q Consensus 264 ~h~~---------------------------------------------------------------------------- 267 (400)
+|..
T Consensus 361 ~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~ 440 (603)
T KOG0318|consen 361 GHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSI 440 (603)
T ss_pred cccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceee
Confidence 1110
Q ss_pred -----------CCCCcccC-CCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeeccc--ch--h-
Q psy12356 268 -----------EENGQLRD-PSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR--GI--F- 330 (400)
Q Consensus 268 -----------~~~g~~~~-~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~--~~--~- 330 (400)
+|++..++ +++++.+++..+..+++. .......|...|..|+|||||++||+... +. |
T Consensus 441 ~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~-----ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd 515 (603)
T KOG0318|consen 441 PIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELK-----EEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYD 515 (603)
T ss_pred ccccccceEEEcCCCCEEEEecccceEEEEEecCCccc-----ceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEE
Confidence 01111110 122233332222221110 00112358899999999999999986432 11 1
Q ss_pred ---------hcc-cccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCe
Q psy12356 331 ---------ADA-HTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQ 368 (400)
Q Consensus 331 ---------~~g-h~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~ 368 (400)
..+ |+..|++|+|||+.+.+||+ -|..|.||+++.+..
T Consensus 516 ~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~ 564 (603)
T KOG0318|consen 516 VASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAK 564 (603)
T ss_pred cccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhh
Confidence 124 99999999999999999998 499999999987553
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=223.43 Aligned_cols=288 Identities=15% Similarity=0.186 Sum_probs=206.4
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+-|.||++.|-...+||||.|++|+|||+.+++ +..++.||- +.|..|++|+-++
T Consensus 152 gWVr~vavdP~n~wf~tgs~DrtikIwDlatg~-----------LkltltGhi------------~~vr~vavS~rHp-- 206 (460)
T KOG0285|consen 152 GWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ-----------LKLTLTGHI------------ETVRGVAVSKRHP-- 206 (460)
T ss_pred ceEEEEeeCCCceeEEecCCCceeEEEEcccCe-----------EEEeecchh------------heeeeeeecccCc--
Confidence 568999999999999999999999999999753 344788886 4588999999886
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|++||.||++..++ .+|.+.|.+++.||.. ..|++|+.|.++|+||+|+...+.....+-. .+
T Consensus 207 YlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTl-dvl~t~grDst~RvWDiRtr~~V~~l~GH~~-----~V 280 (460)
T KOG0285|consen 207 YLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTL-DVLVTGGRDSTIRVWDIRTRASVHVLSGHTN-----PV 280 (460)
T ss_pred eEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccc-eeEEecCCcceEEEeeecccceEEEecCCCC-----cc
Confidence 677789999999999998773 4577889999999974 7899999999999999999854321111110 00
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+ ..-+....+.+++.|++|||||++.++..- .+..|...|.+++.+|+....
T Consensus 281 ~~V----------~~~~~dpqvit~S~D~tvrlWDl~agkt~~----------------tlt~hkksvral~lhP~e~~f 334 (460)
T KOG0285|consen 281 ASV----------MCQPTDPQVITGSHDSTVRLWDLRAGKTMI----------------TLTHHKKSVRALCLHPKENLF 334 (460)
T ss_pred eeE----------EeecCCCceEEecCCceEEEeeeccCceeE----------------eeecccceeeEEecCCchhhh
Confidence 111 111223346677899999999999876421 133577789999999999999
Q ss_pred EEecCCeEEEEeCCCCCCceeeecCCCcC-------CCCcccCCCCCceeecCcccccceeeccCccceeccccccceEE
Q psy12356 240 ISRDYLCVKVWDLHMESRPVETYPTHTKE-------ENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINS 312 (400)
Q Consensus 240 as~~D~tIklWD~~~~~~~l~~~~~h~~~-------~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 312 (400)
||++-..||-|++-.+. .++.+++|... .||.+++++..+.+-.|+.. .+|.+.--.
T Consensus 335 ASas~dnik~w~~p~g~-f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwk---------------sg~nyQ~~~ 398 (460)
T KOG0285|consen 335 ASASPDNIKQWKLPEGE-FLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWK---------------SGHNYQRGQ 398 (460)
T ss_pred hccCCccceeccCCccc-hhhccccccceeeeeeeccCceEEEcCCceEEEEEecC---------------cCccccccc
Confidence 98876789999998764 46678888522 34555555555666555431 123221100
Q ss_pred EEEcCCCcEEeecccchhhcc---cccceeEEEEccCCCEEEEe-cCCeEEEEeCccC--CeeEEEEeecCCcc
Q psy12356 313 ISVNSDQLTVEASPRGIFADA---HTYHISSTSVNSDQETYLSA-DDLRINLWHLEIT--DQSFNIVDIKPTNM 380 (400)
Q Consensus 313 i~~s~dg~~~~~~~~~~~~~g---h~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~--~~~~~~~~~~~~~~ 380 (400)
-. .++| -...|..-+|...|..|+|+ .|.+|++|.-+.. ++..+ ++-||++.
T Consensus 399 t~---------------vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe~aT~EthP-l~w~P~~~ 456 (460)
T KOG0285|consen 399 TI---------------VQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDEHATEETHP-LNWKPELL 456 (460)
T ss_pred cc---------------ccCCccccccceeEEeecccCceEEeccCCcceEEEecccccCcccCC-cCCCCchh
Confidence 00 0111 24568899999999999998 6999999986542 34445 77788754
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=224.89 Aligned_cols=266 Identities=12% Similarity=0.148 Sum_probs=198.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|+.+-|.|+--+.|+++.|++|++||+.+++ +.+.++||+. .|.+|+|...+.
T Consensus 109 ~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~-----------~e~~LrGHt~------------sv~di~~~a~Gk-- 163 (406)
T KOG0295|consen 109 SSVTRVIFHPSEALVVSASEDATIKVFDTETGE-----------LERSLRGHTD------------SVFDISFDASGK-- 163 (406)
T ss_pred cceeeeeeccCceEEEEecCCceEEEEEccchh-----------hhhhhhcccc------------ceeEEEEecCcc--
Confidence 568889999999999999999999999998643 3678999984 389999987662
Q ss_pred eEEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++++.|-++++||.++.. +.+|...|.+|.|-|.+ +.++|++.|++||.|++.++ -|+++..+..
T Consensus 164 ~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~g-d~ilS~srD~tik~We~~tg-------~cv~t~~~h~ 235 (406)
T KOG0295|consen 164 YLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLG-DHILSCSRDNTIKAWECDTG-------YCVKTFPGHS 235 (406)
T ss_pred EEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecC-CeeeecccccceeEEecccc-------eeEEeccCch
Confidence 45567889999999997642 34667789999999986 89999999999999999999 5555554433
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC--
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG-- 236 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg-- 236 (400)
-|-- .+....++.++|+.+.|.++++|=+.++.+. ..+.+|..+|.+++|-|..
T Consensus 236 ewvr--------~v~v~~DGti~As~s~dqtl~vW~~~t~~~k----------------~~lR~hEh~vEci~wap~~~~ 291 (406)
T KOG0295|consen 236 EWVR--------MVRVNQDGTIIASCSNDQTLRVWVVATKQCK----------------AELREHEHPVECIAWAPESSY 291 (406)
T ss_pred HhEE--------EEEecCCeeEEEecCCCceEEEEEeccchhh----------------hhhhccccceEEEEecccccC
Confidence 2211 1223467888899999999999998876432 1134677788899887642
Q ss_pred -------------cEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceee
Q psy12356 237 -------------RYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTV 294 (400)
Q Consensus 237 -------------~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~ 294 (400)
.++.++ .|++||+||+.++ .||-++.||. ++|.|+|+ +...|+++++|++...
T Consensus 292 ~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg-~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~---- 366 (406)
T KOG0295|consen 292 PSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG-MCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNL---- 366 (406)
T ss_pred cchhhccCCCCCccEEEeecccceEEEEeccCC-eEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccc----
Confidence 366664 5999999999987 4777776663 34555543 3445555555554211
Q ss_pred ccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEec-CCeEEEEe
Q psy12356 295 EASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSAD-DLRINLWH 362 (400)
Q Consensus 295 ~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~-D~~i~lW~ 362 (400)
+++ +.+ ..|+.-|++++|..+-.+++||. |+++++|.
T Consensus 367 --~cm----------------------------k~~-~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 367 --QCM----------------------------KTL-EAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred --eee----------------------------ecc-CCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 111 111 37888999999999999999985 99999996
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=228.87 Aligned_cols=270 Identities=19% Similarity=0.226 Sum_probs=190.5
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
-+|+-+.||++|+||||||.|.+..||++.... ..++.+++.+|. ..|.-|.||||.+
T Consensus 225 dEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~--------~~kl~~tlvgh~------------~~V~yi~wSPDdr-- 282 (519)
T KOG0293|consen 225 DEVWFLQFSHNGKYLASASKDSTAIIWIVVYDV--------HFKLKKTLVGHS------------QPVSYIMWSPDDR-- 282 (519)
T ss_pred CcEEEEEEcCCCeeEeeccCCceEEEEEEecCc--------ceeeeeeeeccc------------CceEEEEECCCCC--
Confidence 478999999999999999999999999987542 356678888987 4589999999864
Q ss_pred eEEEeeCCCeEEEEEccCCCcc-----cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME-----ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~-----~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++++.|..+++||+.+|.+. ++...+.+++|.||+ ..|++||.|++|-.||++.+.+- +-.......
T Consensus 283 yLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg-~~~V~Gs~dr~i~~wdlDgn~~~-----~W~gvr~~~ 356 (519)
T KOG0293|consen 283 YLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDG-FRFVTGSPDRTIIMWDLDGNILG-----NWEGVRDPK 356 (519)
T ss_pred eEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCC-ceeEecCCCCcEEEecCCcchhh-----cccccccce
Confidence 6777888999999999999842 334578999999985 78999999999999999887321 111111112
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
++.+.+. +++.....-+.|..|++++..+.... ..++++ .+|++...|.||++
T Consensus 357 v~dlait----------~Dgk~vl~v~~d~~i~l~~~e~~~dr----------------~lise~-~~its~~iS~d~k~ 409 (519)
T KOG0293|consen 357 VHDLAIT----------YDGKYVLLVTVDKKIRLYNREARVDR----------------GLISEE-QPITSFSISKDGKL 409 (519)
T ss_pred eEEEEEc----------CCCcEEEEEecccceeeechhhhhhh----------------cccccc-CceeEEEEcCCCcE
Confidence 2333332 34433333346899999988764321 011222 57999999999998
Q ss_pred EEE-ecCCeEEEEeCCCCCCceeeecCCCcC----------CCCcc-cCCCCCceeecCcccccceeeccCccceecccc
Q psy12356 239 MIS-RDYLCVKVWDLHMESRPVETYPTHTKE----------ENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 239 las-~~D~tIklWD~~~~~~~l~~~~~h~~~----------~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
++. -.+.+|++||+... ..++.|.||... -+.++ +++++|+.|.+|.-.
T Consensus 410 ~LvnL~~qei~LWDl~e~-~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~------------------ 470 (519)
T KOG0293|consen 410 ALVNLQDQEIHLWDLEEN-KLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRI------------------ 470 (519)
T ss_pred EEEEcccCeeEEeecchh-hHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEcc------------------
Confidence 775 58999999999954 567788888521 01111 234444444444211
Q ss_pred ccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCC-EEEEe-cCCeEEEEeCc
Q psy12356 307 TYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQE-TYLSA-DDLRINLWHLE 364 (400)
Q Consensus 307 ~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~-~las~-~D~~i~lW~~~ 364 (400)
.|++++ ...||+..||+|+++|... ++||| +|||||||-..
T Consensus 471 -----------sgkll~------~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 471 -----------SGKLLA------VLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred -----------CCceeE------eecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 122222 1259999999999999774 78886 89999999765
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=236.86 Aligned_cols=234 Identities=23% Similarity=0.384 Sum_probs=169.7
Q ss_pred eEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|+++.|.| .|.+|+||++|+.|+||++.. ..+++++|.||.. .|.+++|++++.
T Consensus 216 gvsai~~fp~~~hLlLS~gmD~~vklW~vy~----------~~~~lrtf~gH~k------------~Vrd~~~s~~g~-- 271 (503)
T KOG0282|consen 216 GVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD----------DRRCLRTFKGHRK------------PVRDASFNNCGT-- 271 (503)
T ss_pred ccchhhhccceeeEEEecCCCceEEEEEEec----------Ccceehhhhcchh------------hhhhhhccccCC--
Confidence 588999999 999999999999999999875 3457899999984 488999999875
Q ss_pred eEEEeeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
.+|++|.|+++||||+++|++. .....++++.|+|++.++|+.|+.|+.|+.||+|+++.++.
T Consensus 272 ~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqe-------------- 337 (503)
T KOG0282|consen 272 SFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQE-------------- 337 (503)
T ss_pred eeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHH--------------
Confidence 8999999999999999999853 22456799999999889999999999999999999943211
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
+..|.+.|+.+.|-|+|++.+
T Consensus 338 -----------------------------------------------------------Yd~hLg~i~~i~F~~~g~rFi 358 (503)
T KOG0282|consen 338 -----------------------------------------------------------YDRHLGAILDITFVDEGRRFI 358 (503)
T ss_pred -----------------------------------------------------------HHhhhhheeeeEEccCCceEe
Confidence 113557899999999999888
Q ss_pred E-ecCCeEEEEeCCCCCCceeeec---CCC-----cCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 241 S-RDYLCVKVWDLHMESRPVETYP---THT-----KEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 241 s-~~D~tIklWD~~~~~~~l~~~~---~h~-----~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
+ ++|++++||+.+.+ .+++.+. .|+ -.|++++.++ ..++..|
T Consensus 359 ssSDdks~riWe~~~~-v~ik~i~~~~~hsmP~~~~~P~~~~~~a---------------------------Qs~dN~i- 409 (503)
T KOG0282|consen 359 SSSDDKSVRIWENRIP-VPIKNIADPEMHTMPCLTLHPNGKWFAA---------------------------QSMDNYI- 409 (503)
T ss_pred eeccCccEEEEEcCCC-ccchhhcchhhccCcceecCCCCCeehh---------------------------hccCceE-
Confidence 6 57899999999986 4554331 222 1222222110 1111111
Q ss_pred EEEEcCCCcEEeecccchhhcccc--cceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 312 SISVNSDQLTVEASPRGIFADAHT--YHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~~~~~~gh~--~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
..||.... +-...++.+ .||. +.-.+|.|||||++|+|| .||.+.+||+++.+
T Consensus 410 -~ifs~~~~-~r~nkkK~f-eGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~k 465 (503)
T KOG0282|consen 410 -AIFSTVPP-FRLNKKKRF-EGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTK 465 (503)
T ss_pred -EEEecccc-cccCHhhhh-cceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhh
Confidence 11111100 000111222 3674 344479999999999999 59999999998743
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-28 Score=213.74 Aligned_cols=200 Identities=14% Similarity=0.203 Sum_probs=158.2
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+|..|..++||++..|+|.|+++|+||+.++ +..+.|.||+.+ |.+|+|+||.. +
T Consensus 65 ~v~dv~~s~dg~~alS~swD~~lrlWDl~~g-----------~~t~~f~GH~~d------------Vlsva~s~dn~--q 119 (315)
T KOG0279|consen 65 FVSDVVLSSDGNFALSASWDGTLRLWDLATG-----------ESTRRFVGHTKD------------VLSVAFSTDNR--Q 119 (315)
T ss_pred EecceEEccCCceEEeccccceEEEEEecCC-----------cEEEEEEecCCc------------eEEEEecCCCc--e
Confidence 6889999999999999999999999999864 346789999965 99999999864 7
Q ss_pred EEEeeCCCeEEEEEccCCC---ccc--ccccEEEEEEecCC-CCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTN---MEE--LNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~---~~~--~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
++++|.|+||+||++..+. +.. +...|++|.|+|.. .-+|+++|.|++||+||+++.++...|-.+ +
T Consensus 120 ivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh-------~ 192 (315)
T KOG0279|consen 120 IVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGH-------S 192 (315)
T ss_pred eecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccc-------c
Confidence 8889999999999987654 111 25679999999984 458999999999999999998653322111 0
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
.+ ...+..+|++-..++|+.||.+.|||++.++.+. .+ +|...|.+++|+|+-..
T Consensus 193 ~~--------v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~ly----sl-------------~a~~~v~sl~fspnryw 247 (315)
T KOG0279|consen 193 GY--------VNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLY----SL-------------EAFDIVNSLCFSPNRYW 247 (315)
T ss_pred cc--------EEEEEECCCCCEEecCCCCceEEEEEccCCceeE----ec-------------cCCCeEeeEEecCCcee
Confidence 00 0112345888888889999999999999877531 11 46678999999999999
Q ss_pred EEEecCCeEEEEeCCCCCCceeee
Q psy12356 239 MISRDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 239 las~~D~tIklWD~~~~~~~l~~~ 262 (400)
|+.+.+..|||||+.+. .++.++
T Consensus 248 L~~at~~sIkIwdl~~~-~~v~~l 270 (315)
T KOG0279|consen 248 LCAATATSIKIWDLESK-AVVEEL 270 (315)
T ss_pred EeeccCCceEEEeccch-hhhhhc
Confidence 98877778999999986 356555
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=210.56 Aligned_cols=265 Identities=14% Similarity=0.178 Sum_probs=193.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|++++|+-||+|.++|+.|.+||+||.-.+ .+++++.+|..+ |..++.+.|..
T Consensus 18 gaV~avryN~dGnY~ltcGsdrtvrLWNp~rg-----------~liktYsghG~E------------VlD~~~s~Dns-- 72 (307)
T KOG0316|consen 18 GAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG-----------ALIKTYSGHGHE------------VLDAALSSDNS-- 72 (307)
T ss_pred cceEEEEEccCCCEEEEcCCCceEEeeccccc-----------ceeeeecCCCce------------eeecccccccc--
Confidence 68999999999999999999999999997643 357899999854 88888877653
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
++++++.|+.|.+||+.+|+ +++|.+.|+.|+|+.. ...++|||.|.++|+||.|+... .+++.+..
T Consensus 73 kf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNee-sSVv~SgsfD~s~r~wDCRS~s~-----ePiQilde--- 143 (307)
T KOG0316|consen 73 KFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEE-SSVVASGSFDSSVRLWDCRSRSF-----EPIQILDE--- 143 (307)
T ss_pred ccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCc-ceEEEeccccceeEEEEcccCCC-----Cccchhhh---
Confidence 78889999999999999997 4688899999999987 47899999999999999998732 12222110
Q ss_pred eceeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 160 QGLIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
..+++.+.. ....+.+|+.||++|.||+|.+.+.... ...+|+++.|||||+.
T Consensus 144 --------a~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy------------------~g~pit~vs~s~d~nc 197 (307)
T KOG0316|consen 144 --------AKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDY------------------FGHPITSVSFSKDGNC 197 (307)
T ss_pred --------hcCceeEEEecccEEEeeccCCcEEEEEeecceeehhh------------------cCCcceeEEecCCCCE
Confidence 011111111 1233566789999999999988654221 1257999999999997
Q ss_pred EE-EecCCeEEEEeCCCCCCceeeecCCCcCC----------CCcccCCCCCceeecCcccccceeeccCccceeccccc
Q psy12356 239 MI-SRDYLCVKVWDLHMESRPVETYPTHTKEE----------NGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHT 307 (400)
Q Consensus 239 la-s~~D~tIklWD~~~~~~~l~~~~~h~~~~----------~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (400)
.+ ++-|.++||-|-.++ +.|+.|.||.+.. +...++.++++.+-+|++-.
T Consensus 198 ~La~~l~stlrLlDk~tG-klL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd------------------ 258 (307)
T KOG0316|consen 198 SLASSLDSTLRLLDKETG-KLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVD------------------ 258 (307)
T ss_pred EEEeeccceeeecccchh-HHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEecc------------------
Confidence 65 567999999999987 4789999996321 12223445556555554411
Q ss_pred cceEEEEEcCCCcEEeecccchhhcccccc-eeEEEEccCCCEEEEecCCeEEEEeCc
Q psy12356 308 YHINSISVNSDQLTVEASPRGIFADAHTYH-ISSTSVNSDQETYLSADDLRINLWHLE 364 (400)
Q Consensus 308 ~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~-V~~i~fspDg~~las~~D~~i~lW~~~ 364 (400)
++++.. + ..|... |.+|+|+|.-..++++.++.+..|..+
T Consensus 259 -----------~~~~sk-----~-~~~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~~~ 299 (307)
T KOG0316|consen 259 -----------ETQISK-----L-SVVSTVIVTDLSCHPTMDDFITATGHGDLFWYQE 299 (307)
T ss_pred -----------ceeeee-----e-ccCCceeEEeeecccCccceeEecCCceeceeeh
Confidence 111100 0 123443 789999999998999888888888643
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=234.37 Aligned_cols=343 Identities=15% Similarity=0.173 Sum_probs=222.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+-|.-++|+|.|.+||+|+.||.|+|||+..+ .+.+.|+||. +-|.++.|+|+.+..
T Consensus 106 ~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~-----------~~th~fkG~g------------GvVssl~F~~~~~~~ 162 (775)
T KOG0319|consen 106 APVITMAFDPTGTLLATGGADGRVKVWDIKNG-----------YCTHSFKGHG------------GVVSSLLFHPHWNRW 162 (775)
T ss_pred CCeEEEEEcCCCceEEeccccceEEEEEeeCC-----------EEEEEecCCC------------ceEEEEEeCCccchh
Confidence 34677899999999999999999999999853 3578899997 348999999987543
Q ss_pred eEEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccc---cc---ceec
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR---HS---KCLI 152 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~---~~---~~~~ 152 (400)
.++++..|+++++||+..+. ++.|.+.|++++|.+++ ..+++++.|..+.+||+...+..+. .. .+..
T Consensus 163 lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~-~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~ 241 (775)
T KOG0319|consen 163 LLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDS-LELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVR 241 (775)
T ss_pred heeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCC-ceEEEeccCcEEEEeehhhhhhhheechhhheeeEEE
Confidence 34556789999999998654 35678899999999985 7889999999999999966543211 00 0000
Q ss_pred cCc-------------ccceeceeccCch----------hhhhhc-----ccCcceeecCCCCCeEEEeecccccccCcc
Q psy12356 153 EGT-------------NCNCQGLIVPESK----------REERQS-----SQNRREKEDNRRKPAIRLCDMRAAALCDRH 204 (400)
Q Consensus 153 ~~~-------------~~~~~~~~~~~~~----------~~~~~~-----~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~ 204 (400)
... +.......-+++. .+++.. ...+.+.++ .|..+.++|.+......+.
T Consensus 242 l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vt--aeQnl~l~d~~~l~i~k~i 319 (775)
T KOG0319|consen 242 LREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVT--AEQNLFLYDEDELTIVKQI 319 (775)
T ss_pred echhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEE--ccceEEEEEccccEEehhh
Confidence 000 0000000000000 000000 001111222 3556666654442211000
Q ss_pred cc--------cccCCCC---------CC---------CcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCC-
Q psy12356 205 SK--------FFEEPED---------PT---------NKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMES- 256 (400)
Q Consensus 205 ~~--------~~~~~~~---------~~---------~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~- 256 (400)
+. -|.+|+. +. .-+.+.||+..|.++.-..+|-+|+|+ -|++|++|.+.++.
T Consensus 320 vG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~ 399 (775)
T KOG0319|consen 320 VGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCS 399 (775)
T ss_pred cCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcc
Confidence 00 0111110 00 011367899999999966778888875 59999999885442
Q ss_pred --CceeeecCCCcCC-------CCc--ccCCCCCceeecCcccccceeecc---CccceeccccccceEEEEEcCCCcEE
Q psy12356 257 --RPVETYPTHTKEE-------NGQ--LRDPSNITALRVPQIKPIELTVEA---SPRRIFANAHTYHINSISVNSDQLTV 322 (400)
Q Consensus 257 --~~l~~~~~h~~~~-------~g~--~~~~~~~~~i~l~~~~~~~~~~~~---~~~~~~~~~~~~~i~~i~~s~dg~~~ 322 (400)
.|++..++|+... .|. +++.|.|.++|+|.+...+..... .++.. ..+|+.+||+++++|+.+++
T Consensus 400 ~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t-~~aHdKdIN~Vaia~ndkLi 478 (775)
T KOG0319|consen 400 KSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYT-ERAHDKDINCVAIAPNDKLI 478 (775)
T ss_pred hhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHH-HHhhcccccceEecCCCceE
Confidence 3567788897432 222 245799999999988542221110 11111 24699999999999999999
Q ss_pred eecccc----hh----------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCeeEEEEe
Q psy12356 323 EASPRG----IF----------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQSFNIVD 374 (400)
Q Consensus 323 ~~~~~~----~~----------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~~~~~~~ 374 (400)
|++++. +| ..||...|.+|.|+|..+.|||+ +|+|||||.+++ ..|.+.++
T Consensus 479 AT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~-fSClkT~e 544 (775)
T KOG0319|consen 479 ATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIST-FSCLKTFE 544 (775)
T ss_pred EecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecc-ceeeeeec
Confidence 987652 22 25999999999999999999997 799999999986 33554443
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-27 Score=207.69 Aligned_cols=256 Identities=14% Similarity=0.212 Sum_probs=185.0
Q ss_pred eeEEEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeee-eccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTF-QSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
++|..++|+|- |..||||+.|++||||++.++. .+.+...+ .+|+ +.|.+|+|+|.++
T Consensus 15 ~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~--------s~~ck~vld~~hk------------rsVRsvAwsp~g~ 74 (312)
T KOG0645|consen 15 DRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGD--------SWTCKTVLDDGHK------------RSVRSVAWSPHGR 74 (312)
T ss_pred CcEEEEEeccCCceEEEeecCCceEEEEecCCCC--------cEEEEEeccccch------------heeeeeeecCCCc
Confidence 57899999998 9999999999999999997532 33333333 2465 4599999999984
Q ss_pred CceEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.++++|.|.|+-||.-..++ +++|...|-+|+|+++| ++||+||.|..|-+|.+..+... .|+
T Consensus 75 --~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG-~~LATCSRDKSVWiWe~deddEf----ec~---- 143 (312)
T KOG0645|consen 75 --YLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASG-NYLATCSRDKSVWIWEIDEDDEF----ECI---- 143 (312)
T ss_pred --EEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCC-CEEEEeeCCCeEEEEEecCCCcE----EEE----
Confidence 56668999999999876665 35778889999999985 89999999999999998855100 010
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
..+++|+..|-.|.|+|.
T Consensus 144 --------------------------------------------------------------aVL~~HtqDVK~V~WHPt 161 (312)
T KOG0645|consen 144 --------------------------------------------------------------AVLQEHTQDVKHVIWHPT 161 (312)
T ss_pred --------------------------------------------------------------eeeccccccccEEEEcCC
Confidence 113467888889999998
Q ss_pred CcEEEEe-cCCeEEEEeCCCC--CCceeeecCCC-------cCCCC-cccCCCCCceeecCcccccceeeccCccceecc
Q psy12356 236 GRYMISR-DYLCVKVWDLHME--SRPVETYPTHT-------KEENG-QLRDPSNITALRVPQIKPIELTVEASPRRIFAN 304 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~--~~~l~~~~~h~-------~~~~g-~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~ 304 (400)
..+|+|+ -|+|||+|+-..+ =.+.+++.+|+ |.++| ++++.+.++++++|....+ +..
T Consensus 162 ~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~-----------~~~ 230 (312)
T KOG0645|consen 162 EDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD-----------LSG 230 (312)
T ss_pred cceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC-----------cch
Confidence 8899975 4899999977632 24678888885 45667 4667888999998864211 112
Q ss_pred ccccceEEEEEcCCCcEEeeccc--------------chh------hcccccceeEEEEccC-CCEEEEe-cCCeEEEEe
Q psy12356 305 AHTYHINSISVNSDQLTVEASPR--------------GIF------ADAHTYHISSTSVNSD-QETYLSA-DDLRINLWH 362 (400)
Q Consensus 305 ~~~~~i~~i~~s~dg~~~~~~~~--------------~~~------~~gh~~~V~~i~fspD-g~~las~-~D~~i~lW~ 362 (400)
-|...+..+.+. +|.+..+.+. ..+ ...|...||+|+++|. ...|+|+ +||+|++|.
T Consensus 231 ~~sr~~Y~v~W~-~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~ 309 (312)
T KOG0645|consen 231 MHSRALYDVPWD-NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWE 309 (312)
T ss_pred hcccceEeeeec-ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEE
Confidence 244445555554 3322211110 011 2479999999999996 5578886 799999998
Q ss_pred Cc
Q psy12356 363 LE 364 (400)
Q Consensus 363 ~~ 364 (400)
+.
T Consensus 310 l~ 311 (312)
T KOG0645|consen 310 LE 311 (312)
T ss_pred ec
Confidence 75
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=229.15 Aligned_cols=320 Identities=17% Similarity=0.185 Sum_probs=211.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
-|.||.|||||+++|.|. .+.++||...+..+.+ ...+...+++.+|-. .|.+|.|+.|++ .
T Consensus 98 ~v~~i~fSPng~~fav~~-gn~lqiw~~P~~~~~~---~~pFvl~r~~~g~fd------------di~si~Ws~DSr--~ 159 (893)
T KOG0291|consen 98 GVGAIKFSPNGKFFAVGC-GNLLQIWHAPGEIKNE---FNPFVLHRTYLGHFD------------DITSIDWSDDSR--L 159 (893)
T ss_pred ccceEEECCCCcEEEEEe-cceeEEEecCcchhcc---cCcceEeeeecCCcc------------ceeEEEeccCCc--e
Confidence 367999999999999876 5689999987543210 123444567777764 499999998873 5
Q ss_pred EEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc--cc------------
Q psy12356 85 FLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA--LC------------ 144 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~--~~------------ 144 (400)
++++|.|.++|||+++..+ +.+|...|.+.-|..+. ..+.+.+.||.+-+|.....- ..
T Consensus 160 l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~-~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~ 238 (893)
T KOG0291|consen 160 LVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANS-LDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDE 238 (893)
T ss_pred EEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCc-ceEEEEecCceEEEEEecCCCcccccccccccccccc
Confidence 5567999999999997644 35678889898898864 678999999999999877210 00
Q ss_pred --------cccc-------ce-e----ccCcccc---------------------------eeceeccCchhhhhhcccC
Q psy12356 145 --------DRHS-------KC-L----IEGTNCN---------------------------CQGLIVPESKREERQSSQN 177 (400)
Q Consensus 145 --------~~~~-------~~-~----~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~ 177 (400)
..+. ++ . ..+..+. +..+.+++.+...+.....
T Consensus 239 ~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~t 318 (893)
T KOG0291|consen 239 EMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNST 318 (893)
T ss_pred cccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEeccc
Confidence 0000 00 0 0000000 0001111000000001111
Q ss_pred cceeecCC-CCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCC
Q psy12356 178 RREKEDNR-RKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 178 ~~~~~~~~-~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~ 255 (400)
+-..+-++ .=|.+-+|+.+.-.- + ++ ..+|...+.++++||||+++|++ +|+.|||||...+
T Consensus 319 GDWiA~g~~klgQLlVweWqsEsY------V--------lK--QQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sg 382 (893)
T KOG0291|consen 319 GDWIAFGCSKLGQLLVWEWQSESY------V--------LK--QQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSG 382 (893)
T ss_pred CCEEEEcCCccceEEEEEeeccce------e--------ee--ccccccceeeEEECCCCcEEEeccCCCcEEEEeccCc
Confidence 11122222 335666777654211 1 11 24888999999999999999985 7899999999987
Q ss_pred CCceeeecCCC-------cCCCCcc-cCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeeccc
Q psy12356 256 SRPVETYPTHT-------KEENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR 327 (400)
Q Consensus 256 ~~~l~~~~~h~-------~~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~ 327 (400)
. |+.+|..|+ +...|+. ++++-|++||.|++...... +++..+-.....+++.-|.|.++.++.+
T Consensus 383 f-C~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNf------RTft~P~p~QfscvavD~sGelV~AG~~ 455 (893)
T KOG0291|consen 383 F-CFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNF------RTFTSPEPIQFSCVAVDPSGELVCAGAQ 455 (893)
T ss_pred e-EEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccccee------eeecCCCceeeeEEEEcCCCCEEEeecc
Confidence 5 789999885 4456664 57889999999998533221 2233333444577888888887765543
Q ss_pred chh---------------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccC
Q psy12356 328 GIF---------------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEIT 366 (400)
Q Consensus 328 ~~~---------------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~ 366 (400)
..+ ..||.++|.+++|+|+|..|||+ .|+|||+||+-..
T Consensus 456 d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 456 DSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred ceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 211 25999999999999999999997 6999999998554
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-28 Score=227.24 Aligned_cols=283 Identities=15% Similarity=0.185 Sum_probs=193.4
Q ss_pred eEEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+|.+++|+|--. +||+++.|-+.++|++.+.... +.. ...|+ |... ....+...++.|++++|+.+|.
T Consensus 180 ~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~-----~~~--q~~lr-h~~~-~~~~s~~~nkdVT~L~Wn~~G~-- 248 (524)
T KOG0273|consen 180 EVFICAWNPLRDGLLASGSGDSTARIWNLLENSNI-----GST--QLVLR-HCIR-EGGKSVPSNKDVTSLDWNNDGT-- 248 (524)
T ss_pred ceEEEecCchhhhhhhccCCccceeeeeehhhccc-----cch--hhhhh-hhhh-hhcccCCccCCcceEEecCCCC--
Confidence 588999999666 9999999999999998852100 000 00111 1100 0011222345699999998774
Q ss_pred eEEEeeCCCeEEEEEccCCC---cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN---MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~---~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
.+++++.||.+|||+...+. +..|.++|.++.|+-+| ++|++++-|+++-|||..++.....+..+...
T Consensus 249 ~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G-~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~------- 320 (524)
T KOG0273|consen 249 LLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKG-TYILSGGVDGTTILWDAHTGTVKQQFEFHSAP------- 320 (524)
T ss_pred eEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCC-CEEEeccCCccEEEEeccCceEEEeeeeccCC-------
Confidence 66778999999999987665 45688999999999985 89999999999999999888432211111100
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
...+ .+.+....++.+.|+.|+++-+.. ++|+++| .+|.++|+++.|.|.|.+|+
T Consensus 321 --------~lDV-dW~~~~~F~ts~td~~i~V~kv~~----~~P~~t~------------~GH~g~V~alk~n~tg~LLa 375 (524)
T KOG0273|consen 321 --------ALDV-DWQSNDEFATSSTDGCIHVCKVGE----DRPVKTF------------IGHHGEVNALKWNPTGSLLA 375 (524)
T ss_pred --------ccce-EEecCceEeecCCCceEEEEEecC----CCcceee------------ecccCceEEEEECCCCceEE
Confidence 0000 011222345556799999997753 3444443 47889999999999999999
Q ss_pred E-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCcc----------cCCCCCceeecCcccccceeeccCcccee
Q psy12356 241 S-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQL----------RDPSNITALRVPQIKPIELTVEASPRRIF 302 (400)
Q Consensus 241 s-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~----------~~~~~~~~i~l~~~~~~~~~~~~~~~~~~ 302 (400)
| ++|+|+|||...... +.+.+.+|+ ++|+|+. ++++.+.++++|++.. +.+
T Consensus 376 S~SdD~TlkiWs~~~~~-~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~------gv~---- 444 (524)
T KOG0273|consen 376 SCSDDGTLKIWSMGQSN-SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVES------GVP---- 444 (524)
T ss_pred EecCCCeeEeeecCCCc-chhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccC------Cce----
Confidence 7 578999999988764 566777775 2344432 2345555666555411 000
Q ss_pred ccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 303 ANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 303 ~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
--.| ..|+.+|++|+|||+|++|||+ .|+.|.||+.++.+
T Consensus 445 ---------i~~f----------------~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~ 485 (524)
T KOG0273|consen 445 ---------IHTL----------------MKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGK 485 (524)
T ss_pred ---------eEee----------------ccCCCceEEEEecCCCcEEEecCCCCeeEeccccchh
Confidence 0001 3799999999999999999998 59999999998754
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=242.65 Aligned_cols=195 Identities=17% Similarity=0.209 Sum_probs=160.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|..++|+||.++|+|||.|++||||.+.+. ..+-.++||.. .|..|+|+|.|-
T Consensus 452 GPVyg~sFsPd~rfLlScSED~svRLWsl~t~-----------s~~V~y~GH~~------------PVwdV~F~P~Gy-- 506 (707)
T KOG0263|consen 452 GPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTW-----------SCLVIYKGHLA------------PVWDVQFAPRGY-- 506 (707)
T ss_pred CceeeeeecccccceeeccCCcceeeeecccc-----------eeEEEecCCCc------------ceeeEEecCCce--
Confidence 67899999999999999999999999999853 24557889984 599999999873
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.|+++|.|+|.|||..+... +.+|.+.|.++.|||+ .+++|+||.|.++|+||+.+|..++.++++... +
T Consensus 507 YFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~-----V 580 (707)
T KOG0263|consen 507 YFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGP-----V 580 (707)
T ss_pred EEEecCCCceeeeeecccCCchhhhcccccccceEEECCc-ccccccCCCCceEEEEEcCCCcEEEEecCCCCc-----e
Confidence 67788999999999987654 4577788999999998 589999999999999999999765544433211 1
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+ ..+|.++..++|+.||.|++||+..+.... . +.+|++.|.++.||.||..|
T Consensus 581 ~al----------~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~----~------------l~~Ht~ti~SlsFS~dg~vL 634 (707)
T KOG0263|consen 581 TAL----------AFSPCGRYLASGDEDGLIKIWDLANGSLVK----Q------------LKGHTGTIYSLSFSRDGNVL 634 (707)
T ss_pred EEE----------EEcCCCceEeecccCCcEEEEEcCCCcchh----h------------hhcccCceeEEEEecCCCEE
Confidence 122 345888889999999999999999876431 1 34788999999999999999
Q ss_pred EEe-cCCeEEEEeCCCC
Q psy12356 240 ISR-DYLCVKVWDLHME 255 (400)
Q Consensus 240 as~-~D~tIklWD~~~~ 255 (400)
|++ .|.+|+|||+...
T Consensus 635 asgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 635 ASGGADNSVRLWDLTKV 651 (707)
T ss_pred EecCCCCeEEEEEchhh
Confidence 974 6999999999865
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=226.17 Aligned_cols=304 Identities=14% Similarity=0.198 Sum_probs=198.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
-+|.++++.|.|.+++|||-|.+|+.||+.+-... ...++.+..-..| .|++++|+|.+.
T Consensus 168 k~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas----~~~fr~l~P~E~h--------------~i~sl~ys~Tg~-- 227 (641)
T KOG0772|consen 168 KIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDAS----MRSFRQLQPCETH--------------QINSLQYSVTGD-- 227 (641)
T ss_pred eEEEEeeecCCCceeeeccccceEEEEeccccccc----chhhhccCccccc--------------ccceeeecCCCC--
Confidence 47999999999999999999999999999853210 0011111111233 389999999774
Q ss_pred eEEEeeCCCeEEEEEccCCC----------------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----------------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRH 147 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----------------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~ 147 (400)
++|+.+....++|.|.+..+ .++|...+++.+|||+..+.|+|++.||++||||+...+- +
T Consensus 228 ~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~---q 304 (641)
T KOG0772|consen 228 QILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKS---Q 304 (641)
T ss_pred eEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchh---h
Confidence 88888888899999976543 1346677999999999999999999999999999977531 1
Q ss_pred cceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc--
Q psy12356 148 SKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS-- 225 (400)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-- 225 (400)
...+...... +..++ .-.....+++...|+++.||.|++||.+... .++.... =..|..
T Consensus 305 ~qVik~k~~~---g~Rv~---~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~--v~p~~~v-----------k~AH~~g~ 365 (641)
T KOG0772|consen 305 LQVIKTKPAG---GKRVP---VTSCAWNRDGKLIAAGCLDGSIQIWDKGSRT--VRPVMKV-----------KDAHLPGQ 365 (641)
T ss_pred eeEEeeccCC---CcccC---ceeeecCCCcchhhhcccCCceeeeecCCcc--cccceEe-----------eeccCCCC
Confidence 1111111000 00000 0011224677778889999999999985421 1111111 124655
Q ss_pred CeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceecc
Q psy12356 226 SISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFAN 304 (400)
Q Consensus 226 ~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~ 304 (400)
.|++|.||+||++|+| +.|.++||||++...+||....+-..
T Consensus 366 ~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t------------------------------------- 408 (641)
T KOG0772|consen 366 DITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPT------------------------------------- 408 (641)
T ss_pred ceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCc-------------------------------------
Confidence 8999999999999999 67999999999998888876543210
Q ss_pred ccccceEEEEEcCCCcEEeecc-------------------cchhh-cccccceeEEEEccCCCEEE-EecCCeEEEEe-
Q psy12356 305 AHTYHINSISVNSDQLTVEASP-------------------RGIFA-DAHTYHISSTSVNSDQETYL-SADDLRINLWH- 362 (400)
Q Consensus 305 ~~~~~i~~i~~s~dg~~~~~~~-------------------~~~~~-~gh~~~V~~i~fspDg~~la-s~~D~~i~lW~- 362 (400)
.+.-...+||||.++|.+.. ..++. .=.+..|..+.|+|-=.+|. +++||+++++-
T Consensus 409 --~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyYd 486 (641)
T KOG0772|consen 409 --PFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVYYD 486 (641)
T ss_pred --cCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEEEC
Confidence 00001223444433332110 00111 01256788999999865555 45899988764
Q ss_pred CccCCeeEEEEeecCCcccchhhhhh
Q psy12356 363 LEITDQSFNIVDIKPTNMEELNEVRE 388 (400)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (400)
.....+...+|=+||++-....|++.
T Consensus 487 p~~S~RGak~cv~k~~rkk~~~e~~~ 512 (641)
T KOG0772|consen 487 PNESIRGAKLCVVKPPRKKHIDEDLS 512 (641)
T ss_pred ccccccchhheeecCccccchhhhcC
Confidence 44455677999999997665555543
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-27 Score=235.81 Aligned_cols=222 Identities=16% Similarity=0.197 Sum_probs=156.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCc---------------------------c---ccC------------
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSK---------------------------T---SIP------------ 41 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~---------------------------~---~~~------------ 41 (400)
+.|+++.||+||+|||||+.||.||||.+.+... . ..+
T Consensus 268 gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~ 347 (712)
T KOG0283|consen 268 GAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPC 347 (712)
T ss_pred CcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCcc
Confidence 6899999999999999999999999999876100 0 000
Q ss_pred -------CCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCc---ccccccE
Q psy12356 42 -------KRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNM---EELNEVI 111 (400)
Q Consensus 42 -------~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~---~~~~~~V 111 (400)
.....++++.|.||+++ |.+|.||..+ .+|++|.|+|||||++...++ -.|...|
T Consensus 348 ~~~p~~~f~f~ekP~~ef~GHt~D------------ILDlSWSKn~---fLLSSSMDKTVRLWh~~~~~CL~~F~HndfV 412 (712)
T KOG0283|consen 348 VLLPLKAFVFSEKPFCEFKGHTAD------------ILDLSWSKNN---FLLSSSMDKTVRLWHPGRKECLKVFSHNDFV 412 (712)
T ss_pred ccCCCccccccccchhhhhccchh------------heecccccCC---eeEeccccccEEeecCCCcceeeEEecCCee
Confidence 01112345566777755 8999999753 778889999999999987763 4688999
Q ss_pred EEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEE
Q psy12356 112 TAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIR 191 (400)
Q Consensus 112 ~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~ 191 (400)
++|+|+|.+.++|+|||.|+.||||++-..+...- ..+..+. . .+...|+|.....|+.+|.++
T Consensus 413 TcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W--~Dl~~lI----T----------Avcy~PdGk~avIGt~~G~C~ 476 (712)
T KOG0283|consen 413 TCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDW--NDLRDLI----T----------AVCYSPDGKGAVIGTFNGYCR 476 (712)
T ss_pred EEEEecccCCCcEeecccccceEEeecCcCeeEee--hhhhhhh----e----------eEEeccCCceEEEEEeccEEE
Confidence 99999999999999999999999999987754221 1111110 0 112347777666778999999
Q ss_pred EeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC--cEEEEecCCeEEEEeCCCCCCceeeecCC
Q psy12356 192 LCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG--RYMISRDYLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 192 lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg--~~las~~D~tIklWD~~~~~~~l~~~~~h 265 (400)
+|+++.-+... .++....+..+ . .| ..|+.+.|.|-. +.|++++|..|||+|.+.. .++..|.|+
T Consensus 477 fY~t~~lk~~~----~~~I~~~~~Kk--~-~~-~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~-~lv~KfKG~ 543 (712)
T KOG0283|consen 477 FYDTEGLKLVS----DFHIRLHNKKK--K-QG-KRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDK-DLVHKFKGF 543 (712)
T ss_pred EEEccCCeEEE----eeeEeeccCcc--c-cC-ceeeeeEecCCCCCeEEEecCCCceEEEeccch-hhhhhhccc
Confidence 99998643321 11110000000 1 23 279999998743 4889999999999999764 356667654
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=217.30 Aligned_cols=215 Identities=17% Similarity=0.224 Sum_probs=162.9
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|..|+|+..|++||+||.|=.+++||.++ .+++++.+.+|+ ..|.+|.|.|-++ .
T Consensus 152 sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~----------~~~c~ks~~gh~------------h~vS~V~f~P~gd--~ 207 (406)
T KOG0295|consen 152 SVFDISFDASGKYLATCSSDLSAKLWDFDT----------FFRCIKSLIGHE------------HGVSSVFFLPLGD--H 207 (406)
T ss_pred ceeEEEEecCccEEEecCCccchhheeHHH----------HHHHHHHhcCcc------------cceeeEEEEecCC--e
Confidence 478999999999999999999999999974 345566777776 4599999999874 8
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc---ccccccceeccCccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA---LCDRHSKCLIEGTNC 157 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~---~~~~~~~~~~~~~~~ 157 (400)
+++++.|.+|+.|++++|. +..|...|..++.+.|| .++|++|.|.++++|=+.++. ..+.|.-.+ . |
T Consensus 208 ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DG-ti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~v-E---c 282 (406)
T KOG0295|consen 208 ILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDG-TIIASCSNDQTLRVWVVATKQCKAELREHEHPV-E---C 282 (406)
T ss_pred eeecccccceeEEecccceeEEeccCchHhEEEEEecCCe-eEEEecCCCceEEEEEeccchhhhhhhccccce-E---E
Confidence 8899999999999999987 35677789999999974 899999999999999999882 223222110 0 1
Q ss_pred ceec-eeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 158 NCQG-LIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 158 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
.-|. ....++ ..+...+. .+...+++++|++||+||+.++.+. |. +.+|.++|..++|||.
T Consensus 283 i~wap~~~~~~-i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL------~t----------L~ghdnwVr~~af~p~ 345 (406)
T KOG0295|consen 283 IAWAPESSYPS-ISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCL------FT----------LVGHDNWVRGVAFSPG 345 (406)
T ss_pred EEecccccCcc-hhhccCCCCCccEEEeecccceEEEEeccCCeEE------EE----------EecccceeeeeEEcCC
Confidence 1110 000000 00011111 2245677889999999999987653 11 4589999999999999
Q ss_pred CcEEEE-ecCCeEEEEeCCCCCCceeeecCCC
Q psy12356 236 GRYMIS-RDYLCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 236 g~~las-~~D~tIklWD~~~~~~~l~~~~~h~ 266 (400)
|+||+| ++|+++|+||+++. +|.+++++|+
T Consensus 346 Gkyi~ScaDDktlrvwdl~~~-~cmk~~~ah~ 376 (406)
T KOG0295|consen 346 GKYILSCADDKTLRVWDLKNL-QCMKTLEAHE 376 (406)
T ss_pred CeEEEEEecCCcEEEEEeccc-eeeeccCCCc
Confidence 999998 58899999999986 5789999986
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=225.34 Aligned_cols=292 Identities=16% Similarity=0.165 Sum_probs=200.1
Q ss_pred eeEEEEEECCCCCeEEEecCC-CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDGELLATGDKG-GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~D-g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.|..++|+..|+.||-|+.. |.+-||+-... . .+-..+||.. .+++++++|||+
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsE---------s--YVlKQQgH~~------------~i~~l~YSpDgq- 363 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSE---------S--YVLKQQGHSD------------RITSLAYSPDGQ- 363 (893)
T ss_pred ceeeEEEecccCCEEEEcCCccceEEEEEeecc---------c--eeeecccccc------------ceeeEEECCCCc-
Confidence 568899999999999988754 88999997642 2 2335688874 499999999985
Q ss_pred ceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++++.|+.|||||...|-| .+|++.|++++|+..+ +.++++|.||+||.||+.....-+++..... ..
T Consensus 364 -~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g-~~llssSLDGtVRAwDlkRYrNfRTft~P~p----~Q 437 (893)
T KOG0291|consen 364 -LIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARG-NVLLSSSLDGTVRAWDLKRYRNFRTFTSPEP----IQ 437 (893)
T ss_pred -EEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecC-CEEEEeecCCeEEeeeecccceeeeecCCCc----ee
Confidence 777889999999999998763 5788999999999975 8899999999999999988743332211000 00
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCC-eEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKP-AIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg-~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
..-+.+. |.+-.+..|+.|. .|.+|++.+|++.+ .+.||.++|.+++|+|+|.
T Consensus 438 fscvavD----------~sGelV~AG~~d~F~IfvWS~qTGqllD----------------iLsGHEgPVs~l~f~~~~~ 491 (893)
T KOG0291|consen 438 FSCVAVD----------PSGELVCAGAQDSFEIFVWSVQTGQLLD----------------ILSGHEGPVSGLSFSPDGS 491 (893)
T ss_pred eeEEEEc----------CCCCEEEeeccceEEEEEEEeecCeeee----------------hhcCCCCcceeeEEccccC
Confidence 0001111 2343444444454 89999999987653 2568999999999999999
Q ss_pred EEEEe-cCCeEEEEeCCCCCCceeeecC-C-----CcCCCCccc-CCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 238 YMISR-DYLCVKVWDLHMESRPVETYPT-H-----TKEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 238 ~las~-~D~tIklWD~~~~~~~l~~~~~-h-----~~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
.|||+ .|+|||+||+........+++. | ++.|+|+-+ .+.-++.|.+|+.......-.-..++-+..|
T Consensus 492 ~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~g---- 567 (893)
T KOG0291|consen 492 LLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGG---- 567 (893)
T ss_pred eEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhcccc----
Confidence 99985 6999999999876434444442 2 367888854 4667778887775432111000011100000
Q ss_pred eEEEEEcCCCcEEeecccchhh-cccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 310 INSISVNSDQLTVEASPRGIFA-DAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~~~~~~-~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
...-| ..+-. ..-....++|.+|+||.+|+++ ..+.|.|+++..+-
T Consensus 568 ----R~~~D--------~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~v 615 (893)
T KOG0291|consen 568 ----RKETD--------RITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGV 615 (893)
T ss_pred ----ccccc--------eeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhh
Confidence 00000 00000 1345678999999999999997 57889999987643
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=229.31 Aligned_cols=276 Identities=14% Similarity=0.135 Sum_probs=203.0
Q ss_pred eEEEEEE-CCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQR-FSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~f-spdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+|..++| .|+-++||.+++.+.+|+|+..+.. + ..+.||+. .|.++.-..++ -
T Consensus 325 EI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~--------c----~ii~GH~e------------~vlSL~~~~~g--~ 378 (775)
T KOG0319|consen 325 EILDMKFLGPEESHLAVATNSPELRLYTLPTSY--------C----QIIPGHTE------------AVLSLDVWSSG--D 378 (775)
T ss_pred hheeeeecCCccceEEEEeCCCceEEEecCCCc--------e----EEEeCchh------------heeeeeecccC--c
Confidence 5777777 6899999999999999999876421 1 25689984 48888832222 2
Q ss_pred eEEEeeCCCeEEEEEccCCC--------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN--------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~--------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.++++|.|++++||.++.+. ..+|+..|.+|+++-.+...|+++|.|+++|+|++...+... .....+..
T Consensus 379 llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~--~~~~~~~~ 456 (775)
T KOG0319|consen 379 LLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETA--FPIVLTCR 456 (775)
T ss_pred EEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCccccc--ccceehhh
Confidence 66678999999999995543 136788899999988788899999999999999998731100 00000000
Q ss_pred ccceeceeccCc-hhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 156 NCNCQGLIVPES-KREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 156 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
......+ ..+++.-+|+....++++.|.+.+||++.+... ...+.||+..|.+|.|+|
T Consensus 457 -----~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l----------------~~vLsGH~RGvw~V~Fs~ 515 (775)
T KOG0319|consen 457 -----YTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRL----------------LGVLSGHTRGVWCVSFSK 515 (775)
T ss_pred -----HHHHhhcccccceEecCCCceEEecccccceeeecccCceE----------------EEEeeCCccceEEEEecc
Confidence 0000000 012334457778899999999999999985432 123568999999999999
Q ss_pred CCcEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCcc-cCCCCCceeecCcccccceeeccCccceeccc
Q psy12356 235 SGRYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANA 305 (400)
Q Consensus 235 dg~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~ 305 (400)
..+.||+ ++|+|||||.+.+. .|+++|+||. |..+|+. ++++.++-+|+|++...+ |.+.
T Consensus 516 ~dq~laT~SgD~TvKIW~is~f-SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~e------C~~t---- 584 (775)
T KOG0319|consen 516 NDQLLATCSGDKTVKIWSISTF-SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNE------CEMT---- 584 (775)
T ss_pred ccceeEeccCCceEEEEEeccc-eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchh------hhhh----
Confidence 9999997 58999999999986 5899999995 5566664 578889999999875432 2111
Q ss_pred cccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 306 HTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 306 ~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
+ .+|.+.|..++.+|++..++|+ .|+.|.+|.=.+
T Consensus 585 ------------------------l-D~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 585 ------------------------L-DAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred ------------------------h-hhccceeEEEeecCccceeEecCCCeEEEEeecCc
Confidence 1 3688888889999999999997 699999997443
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=215.16 Aligned_cols=278 Identities=20% Similarity=0.275 Sum_probs=195.9
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeee---ccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ---SHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~---~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.|+||+|||||.+.||++.||+|.|||=.+++ .+..|. +|. +.|.+|+|+||+.
T Consensus 192 FV~~VRysPDG~~Fat~gsDgki~iyDGktge-----------~vg~l~~~~aHk------------GsIfalsWsPDs~ 248 (603)
T KOG0318|consen 192 FVNCVRYSPDGSRFATAGSDGKIYIYDGKTGE-----------KVGELEDSDAHK------------GSIFALSWSPDST 248 (603)
T ss_pred ceeeEEECCCCCeEEEecCCccEEEEcCCCcc-----------EEEEecCCCCcc------------ccEEEEEECCCCc
Confidence 68999999999999999999999999976542 233444 454 6699999999986
Q ss_pred CceEEEeeCCCeEEEEEccCCCcc-----------------------------------------------cccccEEEE
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTNME-----------------------------------------------ELNEVITAA 114 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~~~-----------------------------------------------~~~~~V~sv 114 (400)
+++++|.|+++||||+.++++. +|...|+++
T Consensus 249 --~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaL 326 (603)
T KOG0318|consen 249 --QFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITAL 326 (603)
T ss_pred --eEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEE
Confidence 8999999999999999865410 123358999
Q ss_pred EEecCCCCEEEEEeCCCeEEEEeccccccc----ccccceeccCcc----------------------------------
Q psy12356 115 EFHPIDCNLFVYSSSKGTIRLCDMRAAALC----DRHSKCLIEGTN---------------------------------- 156 (400)
Q Consensus 115 ~f~p~~~~~las~s~Dg~i~lWD~~~~~~~----~~~~~~~~~~~~---------------------------------- 156 (400)
+.+|++ .+|.||+.||.|.-||..++... +.|...+.....
T Consensus 327 tv~~d~-~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg 405 (603)
T KOG0318|consen 327 TVSPDG-KTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLG 405 (603)
T ss_pred EEcCCC-CEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecC
Confidence 999986 89999999999999999887432 123221111100
Q ss_pred cceeceeccCch------------------h----------hhhhcccCcceeecCCCCCeEEEeecccccccCcccccc
Q psy12356 157 CNCQGLIVPESK------------------R----------EERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFF 208 (400)
Q Consensus 157 ~~~~~~~~~~~~------------------~----------~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~ 208 (400)
+...++...... . ..+..+|++...+.|+.||.+++|-+....+++..
T Consensus 406 ~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~---- 481 (603)
T KOG0318|consen 406 SQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEA---- 481 (603)
T ss_pred CCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCccccee----
Confidence 000011111000 0 00011234445667789999999998865543211
Q ss_pred cCCCCCCCcccccccccCeEEEEECCCCcEEEEec-CCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcc
Q psy12356 209 EEPEDPTNKSFFSEIISSISDVKISNSGRYMISRD-YLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQI 287 (400)
Q Consensus 209 ~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~-D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~ 287 (400)
....|.++|++|+|||||.+||+++ .+.|-+||+.+... ++ +-|.
T Consensus 482 ----------~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~--~~---------------------~~w~- 527 (603)
T KOG0318|consen 482 ----------KLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV--KT---------------------NRWA- 527 (603)
T ss_pred ----------eeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce--ec---------------------ceee-
Confidence 1236889999999999999999886 68999999997531 11 0011
Q ss_pred cccceeeccCccceeccccccceEEEEEcCCCcEEeecccch---------------hhcccccceeEEEEccCCCEEEE
Q psy12356 288 KPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGI---------------FADAHTYHISSTSVNSDQETYLS 352 (400)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~---------------~~~gh~~~V~~i~fspDg~~las 352 (400)
=|+..|+++++|||.+++|+.+... .+.+|...|++|+| -|...|+|
T Consensus 528 -----------------FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~w-lde~tvvS 589 (603)
T KOG0318|consen 528 -----------------FHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAW-LDESTVVS 589 (603)
T ss_pred -----------------eeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEeccccccCceeEEE-ecCceEEe
Confidence 1888899999999999998765421 23589989999999 55566777
Q ss_pred e-cCCeEEEEeCc
Q psy12356 353 A-DDLRINLWHLE 364 (400)
Q Consensus 353 ~-~D~~i~lW~~~ 364 (400)
+ .|-.||+|++.
T Consensus 590 sG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 590 SGQDANIKVWNVT 602 (603)
T ss_pred ccCcceeEEeccc
Confidence 5 79999999864
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-25 Score=205.56 Aligned_cols=266 Identities=18% Similarity=0.258 Sum_probs=178.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|+|++|++++.||.|++|++.+.. ....+.+|.. .+..+.|+|+++
T Consensus 10 ~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~-----------~~~~~~~~~~------------~i~~~~~~~~~~-- 64 (289)
T cd00200 10 GGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE-----------LLRTLKGHTG------------PVRDVAASADGT-- 64 (289)
T ss_pred CCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC-----------cEEEEecCCc------------ceeEEEECCCCC--
Confidence 468999999999999999999999999997532 2345666653 377899999763
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|+.|++||+.+++ +..+...|.++.|+|+ ++++++++.|+.|++||++++....... .. ...+
T Consensus 65 ~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~-~~~i 138 (289)
T cd00200 65 YLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLR----GH-TDWV 138 (289)
T ss_pred EEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEec----cC-CCcE
Confidence 67778889999999998754 2345567999999997 4788888889999999998664322110 00 0011
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+.+ .++....+.++.|+.+++||++.+... .. +..|...|.+++|+|+++.+
T Consensus 139 ~~~~~----------~~~~~~l~~~~~~~~i~i~d~~~~~~~----~~------------~~~~~~~i~~~~~~~~~~~l 192 (289)
T cd00200 139 NSVAF----------SPDGTFVASSSQDGTIKLWDLRTGKCV----AT------------LTGHTGEVNSVAFSPDGEKL 192 (289)
T ss_pred EEEEE----------cCcCCEEEEEcCCCcEEEEEccccccc----ee------------EecCccccceEEECCCcCEE
Confidence 12222 243444455556999999999865421 11 23566789999999999877
Q ss_pred EE-ecCCeEEEEeCCCCCCceeeecCCCc-------CCCCcccC-CCCCceeecCcccccceeeccCccceeccccccce
Q psy12356 240 IS-RDYLCVKVWDLHMESRPVETYPTHTK-------EENGQLRD-PSNITALRVPQIKPIELTVEASPRRIFANAHTYHI 310 (400)
Q Consensus 240 as-~~D~tIklWD~~~~~~~l~~~~~h~~-------~~~g~~~~-~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i 310 (400)
++ +.|+.|++||++++ .++..+..|.. .+++.++. .+.++.+++|++
T Consensus 193 ~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~----------------------- 248 (289)
T cd00200 193 LSSSSDGTIKLWDLSTG-KCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDL----------------------- 248 (289)
T ss_pred EEecCCCcEEEEECCCC-ceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEc-----------------------
Confidence 75 56999999999875 35555544431 11111111 111222222211
Q ss_pred EEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 311 NSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 311 ~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
.. ++. ...+ .+|...|.+++|+|+++.|+++ .|+.|++|+
T Consensus 249 -----~~-~~~-----~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 249 -----RT-GEC-----VQTL-SGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred -----CC-cee-----EEEc-cccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 00 000 0011 3788899999999999999997 699999996
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=210.26 Aligned_cols=247 Identities=50% Similarity=0.758 Sum_probs=189.5
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+|.|..+|.+||||..+|.|.++..+... .+.+++...|+.|+++++|+++++++++|+.++|.++++...
T Consensus 27 iis~vef~~~Ge~LatGdkgGRVv~f~r~~~~------~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~ 100 (433)
T KOG1354|consen 27 IISAVEFDHYGERLATGDKGGRVVLFEREKLY------KGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAE 100 (433)
T ss_pred ceeeEEeecccceEeecCCCCeEEEeeccccc------ccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccE
Confidence 58899999999999999999999999876432 246778889999999999999999999999999999988888
Q ss_pred EEEeeCCCeEEEEEccCCCcc------------------------c----------------ccccEEEEEEecCCCCEE
Q psy12356 85 FLLSTNDQSFNIVDIKPTNME------------------------E----------------LNEVITAAEFHPIDCNLF 124 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~------------------------~----------------~~~~V~sv~f~p~~~~~l 124 (400)
++++.+|++|++|.+.....+ . |+=.|++++++.| ++++
T Consensus 101 FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD-~Et~ 179 (433)
T KOG1354|consen 101 FLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSD-KETF 179 (433)
T ss_pred EEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCc-cceE
Confidence 999999999999998532210 0 1113899999997 4777
Q ss_pred EEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhccc---CcceeecCCCCCeEEEeeccccccc
Q psy12356 125 VYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQ---NRREKEDNRRKPAIRLCDMRAAALC 201 (400)
Q Consensus 125 as~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dg~i~lWD~~~~~~~ 201 (400)
+|+ .|=.|.||.+.--... .-+......++..+-.- .....+.| +.+.. .+..|+|||.|+|+.++|
T Consensus 180 lSA-DdLRINLWnlei~d~s----FnIVDIKP~nmEeLteV---ITsaEFhp~~cn~f~Y--SSSKGtIrLcDmR~~aLC 249 (433)
T KOG1354|consen 180 LSA-DDLRINLWNLEIIDQS----FNIVDIKPANMEELTEV---ITSAEFHPHHCNVFVY--SSSKGTIRLCDMRQSALC 249 (433)
T ss_pred eec-cceeeeeccccccCCc----eeEEEccccCHHHHHHH---HhhhccCHhHccEEEE--ecCCCcEEEeechhhhhh
Confidence 764 7789999998654210 11111111111110000 00001122 12222 235899999999999999
Q ss_pred CcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeeecCCCcC
Q psy12356 202 DRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHTKE 268 (400)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~~h~~~ 268 (400)
+.+.+.|+.|+.|..+++|++-..+|+.|.||++|+++++-+.-||||||+.+..+|+.+++.|.++
T Consensus 250 d~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~l 316 (433)
T KOG1354|consen 250 DAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYL 316 (433)
T ss_pred cchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhH
Confidence 9999999999988888888888899999999999999999999999999999888899999888654
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.4e-26 Score=199.13 Aligned_cols=233 Identities=16% Similarity=0.208 Sum_probs=173.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
-|+.+...||++.||.|+ ...||+||+.... ..++.+|.+|+.. |.+|.|..++. -
T Consensus 42 qVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~n---------p~Pv~t~e~h~kN------------VtaVgF~~dgr--W 97 (311)
T KOG0315|consen 42 QVNRLEITPDKKDLAAAG-NQHVRLYDLNSNN---------PNPVATFEGHTKN------------VTAVGFQCDGR--W 97 (311)
T ss_pred ceeeEEEcCCcchhhhcc-CCeeEEEEccCCC---------CCceeEEeccCCc------------eEEEEEeecCe--E
Confidence 489999999999999887 5689999998753 2357799999744 99999998873 4
Q ss_pred EEEeeCCCeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc---ccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT---NCN 158 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~---~~~ 158 (400)
+.++|.||++||||++.-.+ ..+.+.|++|..||+. .-|++|..+|.|++||+.... |-..+. ...
T Consensus 98 MyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQ-teLis~dqsg~irvWDl~~~~-------c~~~liPe~~~~ 169 (311)
T KOG0315|consen 98 MYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQ-TELISGDQSGNIRVWDLGENS-------CTHELIPEDDTS 169 (311)
T ss_pred EEecCCCceEEEEeccCcccchhccCCCCcceEEecCCc-ceEEeecCCCcEEEEEccCCc-------cccccCCCCCcc
Confidence 55789999999999987543 2456889999999985 568999999999999998872 211111 011
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
+..+.+ .+++...+.+...|.+.+|++-.... ...++ | ...+..|++.+..+.||||+++
T Consensus 170 i~sl~v----------~~dgsml~a~nnkG~cyvW~l~~~~~----~s~l~-P-----~~k~~ah~~~il~C~lSPd~k~ 229 (311)
T KOG0315|consen 170 IQSLTV----------MPDGSMLAAANNKGNCYVWRLLNHQT----ASELE-P-----VHKFQAHNGHILRCLLSPDVKY 229 (311)
T ss_pred eeeEEE----------cCCCcEEEEecCCccEEEEEccCCCc----cccce-E-----hhheecccceEEEEEECCCCcE
Confidence 122221 25666666667899999999875221 11111 1 1226689999999999999999
Q ss_pred EEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccc
Q psy12356 239 MIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKP 289 (400)
Q Consensus 239 las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~ 289 (400)
||+ +.|+|+|||++.+-...-..+++|+ |+.+|.|+ .++.+...|+|++..
T Consensus 230 lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~ 289 (311)
T KOG0315|consen 230 LATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSA 289 (311)
T ss_pred EEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeeccccc
Confidence 996 5799999999987533334577885 78899986 578889999998753
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=211.62 Aligned_cols=267 Identities=12% Similarity=0.162 Sum_probs=185.3
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|+|+.+. ...++||..|.+|+|||.++ ..+++.+.||+. .|.+++|.. ..+
T Consensus 200 VYClQYD--D~kiVSGlrDnTikiWD~n~-----------~~c~~~L~GHtG------------SVLCLqyd~----rvi 250 (499)
T KOG0281|consen 200 VYCLQYD--DEKIVSGLRDNTIKIWDKNS-----------LECLKILTGHTG------------SVLCLQYDE----RVI 250 (499)
T ss_pred eEEEEec--chhhhcccccCceEEecccc-----------HHHHHhhhcCCC------------cEEeeeccc----eEE
Confidence 6777764 44799999999999999974 345678889984 488888842 256
Q ss_pred EEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 86 LLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
+++|.|.||++||+++|++ ..|...|-.+.|+. .+++++|.|.+|.+||+....-. .+.+.+.++...
T Consensus 251 isGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~i----t~rrVLvGHrAa- 322 (499)
T KOG0281|consen 251 VSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDI----TLRRVLVGHRAA- 322 (499)
T ss_pred EecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHH----HHHHHHhhhhhh-
Confidence 6688999999999999984 35778899999985 48999999999999999887311 000111110000
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las 241 (400)
.+.+.+ .+ ....+++.|.+||+|++.+... ++++ .+|...|-++.| .|++++|
T Consensus 323 -------VNvVdf-d~-kyIVsASgDRTikvW~~st~ef----vRtl------------~gHkRGIAClQY--r~rlvVS 375 (499)
T KOG0281|consen 323 -------VNVVDF-DD-KYIVSASGDRTIKVWSTSTCEF----VRTL------------NGHKRGIACLQY--RDRLVVS 375 (499)
T ss_pred -------eeeecc-cc-ceEEEecCCceEEEEeccceee----ehhh------------hcccccceehhc--cCeEEEe
Confidence 000111 11 2345556799999999987643 2333 377788888776 7899998
Q ss_pred e-cCCeEEEEeCCCCCCceeeecCCCcC------CCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEE
Q psy12356 242 R-DYLCVKVWDLHMESRPVETYPTHTKE------ENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSIS 314 (400)
Q Consensus 242 ~-~D~tIklWD~~~~~~~l~~~~~h~~~------~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 314 (400)
+ +|.||||||+..| .||+.++||+.+ -+.+++++..++.||+|++..... ++ ..-..++
T Consensus 376 GSSDntIRlwdi~~G-~cLRvLeGHEeLvRciRFd~krIVSGaYDGkikvWdl~aald-----pr--------a~~~~~C 441 (499)
T KOG0281|consen 376 GSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD-----PR--------APASTLC 441 (499)
T ss_pred cCCCceEEEEecccc-HHHHHHhchHHhhhheeecCceeeeccccceEEEEecccccC-----Cc--------ccccchH
Confidence 5 7999999999987 589999999743 245567778899999998743211 11 0001111
Q ss_pred EcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 315 VNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 315 ~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
+ ... -.|++.|..+.| |..+++|+ .|.+|-|||...
T Consensus 442 l------------~~l-v~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~ 478 (499)
T KOG0281|consen 442 L------------RTL-VEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLN 478 (499)
T ss_pred H------------Hhh-hhccceeEEEee--cceEEEeccCCCeEEEEEcCC
Confidence 1 111 258999999988 45566665 688999999764
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-25 Score=209.42 Aligned_cols=257 Identities=17% Similarity=0.209 Sum_probs=184.8
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|++|+|+.||.+||+|+.||.++||+.... .+.+|.-|. ++|.+|.|+..++ .+
T Consensus 238 VT~L~Wn~~G~~LatG~~~G~~riw~~~G~------------l~~tl~~Hk------------gPI~slKWnk~G~--yi 291 (524)
T KOG0273|consen 238 VTSLDWNNDGTLLATGSEDGEARIWNKDGN------------LISTLGQHK------------GPIFSLKWNKKGT--YI 291 (524)
T ss_pred cceEEecCCCCeEEEeecCcEEEEEecCch------------hhhhhhccC------------CceEEEEEcCCCC--EE
Confidence 789999999999999999999999998742 355777786 4599999997764 78
Q ss_pred EEeeCCCeEEEEEccCCCcc----cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 86 LLSTNDQSFNIVDIKPTNME----ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~~----~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
|+++-|+++-|||..+|... -|..+--.|.|-.+ ..||+++.|+.|++..+.......++..+. + .+
T Consensus 292 lS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~--~~F~ts~td~~i~V~kv~~~~P~~t~~GH~----g-~V-- 362 (524)
T KOG0273|consen 292 LSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSN--DEFATSSTDGCIHVCKVGEDRPVKTFIGHH----G-EV-- 362 (524)
T ss_pred EeccCCccEEEEeccCceEEEeeeeccCCccceEEecC--ceEeecCCCceEEEEEecCCCcceeeeccc----C-ce--
Confidence 88899999999999888632 22333246777654 479999999999999987663322211110 0 00
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc----
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR---- 237 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~---- 237 (400)
..+...|.+..+++.+.|+|+|||.+.+..+.. .+.+|..+|..+.|||+|.
T Consensus 363 --------~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~----------------~l~~Hskei~t~~wsp~g~v~~n 418 (524)
T KOG0273|consen 363 --------NALKWNPTGSLLASCSDDGTLKIWSMGQSNSVH----------------DLQAHSKEIYTIKWSPTGPVTSN 418 (524)
T ss_pred --------EEEEECCCCceEEEecCCCeeEeeecCCCcchh----------------hhhhhccceeeEeecCCCCccCC
Confidence 111222555667777889999999987654321 1457889999999999866
Q ss_pred -----EEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 238 -----YMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 238 -----~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
.|++ +.|.+|++||+..+ .|+.+|..| +.+|.
T Consensus 419 ~~~~~~l~sas~dstV~lwdv~~g-v~i~~f~kH-----------------------------------------~~pVy 456 (524)
T KOG0273|consen 419 PNMNLMLASASFDSTVKLWDVESG-VPIHTLMKH-----------------------------------------QEPVY 456 (524)
T ss_pred CcCCceEEEeecCCeEEEEEccCC-ceeEeeccC-----------------------------------------CCceE
Confidence 5665 67999999999986 588777555 33455
Q ss_pred EEEEcCCCcEEeeccc------------chhh-cccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 312 SISVNSDQLTVEASPR------------GIFA-DAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~------------~~~~-~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
+++|||||.++|+... ++++ .+-.+.|..|.||.+|..|..+ .|+.+.+-|+
T Consensus 457 svafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 457 SVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLDL 522 (524)
T ss_pred EEEecCCCcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEEe
Confidence 6666666666664322 1111 1335679999999999888876 6998888775
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=220.68 Aligned_cols=335 Identities=16% Similarity=0.238 Sum_probs=218.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|+|++-+||.-+||.|-.||.|+||+.... ...-+|.||.++ |+.+.|...| .
T Consensus 66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~-----------~~~~tfngHK~A------------Vt~l~fd~~G--~ 120 (888)
T KOG0306|consen 66 AEVTCLRSSDDILLLAVGYADGSVQIFSLESE-----------EILITFNGHKAA------------VTTLKFDKIG--T 120 (888)
T ss_pred ceEEEeeccCCcceEEEEecCceEEeeccCCC-----------ceeeeecccccc------------eEEEEEcccC--c
Confidence 37899999999999999999999999998743 234478999865 9999998766 4
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccc---c-------
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHS---K------- 149 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~---~------- 149 (400)
+++++|.|+.|-+||+-... +++|...|+..-|... .+.++|+|.|++||+||+.+.....+|- .
T Consensus 121 rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~-~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~ 199 (888)
T KOG0306|consen 121 RLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNG-DSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVL 199 (888)
T ss_pred eEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCC-CeEEEEeccCceEEEEecccceeeeEEecccceEEEEEE
Confidence 88889999999999995433 5688888888878763 5799999999999999999984322210 0
Q ss_pred ----eeccCc--ccceeceeccCchhhhh-----------------------hcccCcceeecCCCCCeEEEeecccccc
Q psy12356 150 ----CLIEGT--NCNCQGLIVPESKREER-----------------------QSSQNRREKEDNRRKPAIRLCDMRAAAL 200 (400)
Q Consensus 150 ----~~~~~~--~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~dg~i~lWD~~~~~~ 200 (400)
++.... ...+|.+.++....+.. ....+++.++ -+.|..+.++.++....
T Consensus 200 ~~~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c-~g~d~~~e~frI~s~~E 278 (888)
T KOG0306|consen 200 DEKLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVC-QGADKVIELFRIRSKEE 278 (888)
T ss_pred ecceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEE-ecchhhhhheeecCHHH
Confidence 111111 12344443332221110 0000111111 11233334443332100
Q ss_pred ---------------------------------------------------------------cCcccccccCCC-C---
Q psy12356 201 ---------------------------------------------------------------CDRHSKFFEEPE-D--- 213 (400)
Q Consensus 201 ---------------------------------------------------------------~~~~~~~~~~~~-~--- 213 (400)
..+.+.++..+. .
T Consensus 279 ~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~ 358 (888)
T KOG0306|consen 279 IAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTS 358 (888)
T ss_pred HHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCC
Confidence 000000000000 0
Q ss_pred CC---Ccc-cccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeeec--------------------------
Q psy12356 214 PT---NKS-FFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYP-------------------------- 263 (400)
Q Consensus 214 ~~---~~~-~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~-------------------------- 263 (400)
|. ... .+.+|...|.+++||.|...++|+..+.|++|+..+.. |++++.
T Consensus 359 p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~k-ciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~ 437 (888)
T KOG0306|consen 359 PEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLK-CIRTITCGYILASKFVPGDRYIVLGTKNGELQ 437 (888)
T ss_pred ccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcc-eeEEeccccEEEEEecCCCceEEEeccCCceE
Confidence 00 000 15689999999999999999999888999999999763 555432
Q ss_pred --------------CCC-------cCCCCcc-cCCCCCceeecCcccccceeeccCccceecc------ccccceEEEEE
Q psy12356 264 --------------THT-------KEENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFAN------AHTYHINSISV 315 (400)
Q Consensus 264 --------------~h~-------~~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~------~~~~~i~~i~~ 315 (400)
+|. ..||++. +.+|.|.++++|+|.-... ..|..++.+.- .-+..|.++++
T Consensus 438 vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~-~~gt~~k~lsl~~~rtLel~ddvL~v~~ 516 (888)
T KOG0306|consen 438 VFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVS-VPGTQKKVLSLKHTRTLELEDDVLCVSV 516 (888)
T ss_pred EEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEec-cCcccceeeeeccceEEeccccEEEEEE
Confidence 221 2356664 4578999999999853322 22333232211 23456899999
Q ss_pred cCCCcEEeecccc----h--------h--hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 316 NSDQLTVEASPRG----I--------F--ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 316 s~dg~~~~~~~~~----~--------~--~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
||||++++.+..+ + + ..||.-+|.|+..|||++.++|+ .|.+||+|-++.++
T Consensus 517 Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGD 583 (888)
T KOG0306|consen 517 SPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGD 583 (888)
T ss_pred cCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccch
Confidence 9999999865431 1 1 25999999999999999999997 69999999998764
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-25 Score=197.10 Aligned_cols=238 Identities=14% Similarity=0.190 Sum_probs=176.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|+++.|++|+++|+|+|.||++.|||.-+.. | .+.+.- .+.+|..++|+|.++
T Consensus 56 ~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~Ttn----------K-~haipl------------~s~WVMtCA~sPSg~-- 110 (343)
T KOG0286|consen 56 NKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTN----------K-VHAIPL------------PSSWVMTCAYSPSGN-- 110 (343)
T ss_pred cceeeeEecCCcCeEEeeccCCeEEEEEccccc----------c-eeEEec------------CceeEEEEEECCCCC--
Confidence 568999999999999999999999999976532 1 111111 125799999999874
Q ss_pred eEEEeeCCCeEEEEEccCC--C--------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 84 HFLLSTNDQSFNIVDIKPT--N--------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~--~--------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
.++.++-|+..-|+++.+. + +.+|++.+.+..|-+| +.|+++|.|.+.-+||+.++.+...+..+..
T Consensus 111 ~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD--~~ilT~SGD~TCalWDie~g~~~~~f~GH~g- 187 (343)
T KOG0286|consen 111 FVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD--NHILTGSGDMTCALWDIETGQQTQVFHGHTG- 187 (343)
T ss_pred eEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCC--CceEecCCCceEEEEEcccceEEEEecCCcc-
Confidence 4555677999999999744 1 3468889999999875 4689999999999999999976544332211
Q ss_pred CcccceeceeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
.+..+.++ | +.....+++-|++.+|||+|.+.+. +. |.+|...|++|+|
T Consensus 188 ----DV~slsl~----------p~~~ntFvSg~cD~~aklWD~R~~~c~----qt------------F~ghesDINsv~f 237 (343)
T KOG0286|consen 188 ----DVMSLSLS----------PSDGNTFVSGGCDKSAKLWDVRSGQCV----QT------------FEGHESDINSVRF 237 (343)
T ss_pred ----cEEEEecC----------CCCCCeEEecccccceeeeeccCccee----Ee------------ecccccccceEEE
Confidence 12233333 3 4445566778999999999987542 23 4478899999999
Q ss_pred CCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 233 SNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 233 Spdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
.|+|.-++++ +|+++|++|++... .+..|+ |.
T Consensus 238 fP~G~afatGSDD~tcRlyDlRaD~-~~a~ys-~~--------------------------------------------- 270 (343)
T KOG0286|consen 238 FPSGDAFATGSDDATCRLYDLRADQ-ELAVYS-HD--------------------------------------------- 270 (343)
T ss_pred ccCCCeeeecCCCceeEEEeecCCc-EEeeec-cC---------------------------------------------
Confidence 9999999975 68999999999763 455552 10
Q ss_pred EEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 312 SISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
.-..+|++|+||-.|++|.++ .|.++.+||.-.++
T Consensus 271 ---------------------~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e 306 (343)
T KOG0286|consen 271 ---------------------SIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGE 306 (343)
T ss_pred ---------------------cccCCceeEEEcccccEEEeeecCCceeEeeccccc
Confidence 012247899999999999997 79999999965433
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=201.51 Aligned_cols=293 Identities=18% Similarity=0.306 Sum_probs=188.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCC------CCc-cccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDP------LSK-TSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~------~~~-~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
.+++-+|||||.++||||.|.+|+|.|++. .+. +.....-...++++|-.|.. .|+.+.|+
T Consensus 114 ~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~d------------evn~l~FH 181 (430)
T KOG0640|consen 114 PCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVD------------EVNDLDFH 181 (430)
T ss_pred ceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccC------------cccceeec
Confidence 467899999999999999999999999872 110 00000001235677878874 49999999
Q ss_pred eccCCceEEEeeCCCeEEEEEccCCC----cccc--cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccccee
Q psy12356 78 RRKNQAHFLLSTNDQSFNIVDIKPTN----MEEL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCL 151 (400)
Q Consensus 78 p~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~ 151 (400)
|... .++++++|++|||+|+.+.. ++.. ...|.+++|||.| .+++.|....+++|+|+.+- +|.
T Consensus 182 Pre~--ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsG-efllvgTdHp~~rlYdv~T~-------Qcf 251 (430)
T KOG0640|consen 182 PRET--ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSG-EFLLVGTDHPTLRLYDVNTY-------QCF 251 (430)
T ss_pred chhh--eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCC-ceEEEecCCCceeEEeccce-------eEe
Confidence 9763 45567899999999997654 2222 3579999999975 77888888889999999987 333
Q ss_pred ccCcccceeceeccCchhhh---hhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccc-cCe
Q psy12356 152 IEGTNCNCQGLIVPESKREE---RQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEII-SSI 227 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V 227 (400)
..... ..++.+. +.-++.+...++++.||.|||||--...+. +.+. ..|. .+|
T Consensus 252 vsanP--------d~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv----~t~~-----------~AH~gsev 308 (430)
T KOG0640|consen 252 VSANP--------DDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCV----RTIG-----------NAHGGSEV 308 (430)
T ss_pred eecCc--------ccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHH----HHHH-----------hhcCCcee
Confidence 22110 0001111 122356677888999999999997765542 2222 1344 479
Q ss_pred EEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceecccc
Q psy12356 228 SDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 228 ~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
.+..|+.+|++|+++ -|.+||||.+.++ ++|++|.|-.. .|+.....+ . .|...|..+ +. ..
T Consensus 309 cSa~Ftkn~kyiLsSG~DS~vkLWEi~t~-R~l~~YtGAg~--tgrq~~rtq--A----vFNhtEdyV-------l~-pD 371 (430)
T KOG0640|consen 309 CSAVFTKNGKYILSSGKDSTVKLWEISTG-RMLKEYTGAGT--TGRQKHRTQ--A----VFNHTEDYV-------LF-PD 371 (430)
T ss_pred eeEEEccCCeEEeecCCcceeeeeeecCC-ceEEEEecCCc--ccchhhhhh--h----hhcCccceE-------Ec-cc
Confidence 999999999999975 5999999999997 58888875421 011000000 0 011111100 00 00
Q ss_pred ccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 307 TYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 307 ~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
. .-++++-| |.+ .+.....+.-||.+.+..+.-||.+.-++++ +|-.+|+|--
T Consensus 372 E-as~slcsW-daR--tadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 372 E-ASNSLCSW-DAR--TADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred c-ccCceeec-ccc--chhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeee
Confidence 0 00111111 000 0011123345999999999999999999997 7999999964
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=201.82 Aligned_cols=206 Identities=22% Similarity=0.299 Sum_probs=155.0
Q ss_pred EEEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+..|+||++ .+.+++|+.||++||||+... .++++.|+.|.++ |.+|.|++-- ...
T Consensus 63 LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~----------s~Pi~~~kEH~~E------------V~Svdwn~~~-r~~ 119 (311)
T KOG0277|consen 63 LFDVAWSENHENQVIAASGDGSLRLFDLTMP----------SKPIHKFKEHKRE------------VYSVDWNTVR-RRI 119 (311)
T ss_pred eeEeeecCCCcceEEEEecCceEEEeccCCC----------CcchhHHHhhhhh------------eEEecccccc-cee
Confidence 567999984 467888999999999997643 3467889999865 9999999864 346
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc---cccccceeccCccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL---CDRHSKCLIEGTNC 157 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~---~~~~~~~~~~~~~~ 157 (400)
++++|.|+||||||...++ +.+|...|...+|||..+++|+++|.|+++++||+|...- +..|...+ -+
T Consensus 120 ~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Ei----l~ 195 (311)
T KOG0277|consen 120 FLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEI----LC 195 (311)
T ss_pred EEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEecccee----Ee
Confidence 7788999999999986554 4577888999999999999999999999999999987621 11111000 01
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
+.|+ .-+...+++++.|+.||.||+|.-.. + .+ .+.+|.-.|..|+|||...
T Consensus 196 cdw~-------------ky~~~vl~Tg~vd~~vr~wDir~~r~---p--l~----------eL~gh~~AVRkvk~Sph~~ 247 (311)
T KOG0277|consen 196 CDWS-------------KYNHNVLATGGVDNLVRGWDIRNLRT---P--LF----------ELNGHGLAVRKVKFSPHHA 247 (311)
T ss_pred eccc-------------ccCCcEEEecCCCceEEEEehhhccc---c--ce----------eecCCceEEEEEecCcchh
Confidence 1121 12345678888999999999996432 1 11 1457888999999999755
Q ss_pred -EEEEec-CCeEEEEeCCCCCCceeeecCCC
Q psy12356 238 -YMISRD-YLCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 238 -~las~~-D~tIklWD~~~~~~~l~~~~~h~ 266 (400)
+|||++ |.|+||||...+..++.++..|+
T Consensus 248 ~lLaSasYDmT~riw~~~~~ds~~e~~~~Ht 278 (311)
T KOG0277|consen 248 SLLASASYDMTVRIWDPERQDSAIETVDHHT 278 (311)
T ss_pred hHhhhccccceEEecccccchhhhhhhhccc
Confidence 666654 89999999997766777777774
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=196.31 Aligned_cols=271 Identities=17% Similarity=0.194 Sum_probs=185.8
Q ss_pred EEEEECC-CCCeEEEe-------cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 7 EASQRFS-DGELLATG-------DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 7 ~~v~fsp-dG~~Las~-------s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
++|.||| -.++||.+ ...|++.|-+++.+. . +..++... -+..+..|+|++
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~--------g---i~e~~s~d----------~~D~LfdV~Wse 70 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPK--------G---IQECQSYD----------TEDGLFDVAWSE 70 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCC--------C---eEEEEeee----------cccceeEeeecC
Confidence 4799999 34455544 257889998886432 1 22333322 125688999999
Q ss_pred ccCCceEEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 79 RKNQAHFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 79 ~~~~~~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
.. +.++++++.||++||||+.... +++|...|.++.+++...+.++++|-|+||||||...+.-+.++.++
T Consensus 71 ~~-e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh--- 146 (311)
T KOG0277|consen 71 NH-ENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGH--- 146 (311)
T ss_pred CC-cceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCC---
Confidence 76 4578889999999999975433 46788899999999998888999999999999998877433322110
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
+..++...+++ ..++.+++++ .|+++||||+|... .+ . .|..|..+|.++.|+
T Consensus 147 --~~~Iy~a~~sp-------~~~nlfas~S--gd~~l~lwdvr~~g---k~---~----------~i~ah~~Eil~cdw~ 199 (311)
T KOG0277|consen 147 --NSCIYQAAFSP-------HIPNLFASAS--GDGTLRLWDVRSPG---KF---M----------SIEAHNSEILCCDWS 199 (311)
T ss_pred --ccEEEEEecCC-------CCCCeEEEcc--CCceEEEEEecCCC---ce---e----------EEEeccceeEeeccc
Confidence 11233333331 2345555554 59999999998642 11 1 145787899999999
Q ss_pred CC-CcEEEEe-cCCeEEEEeCCCCCCceeeecCCCc-------CCCCc--ccCCCCCceeecCcccccceeeccCcccee
Q psy12356 234 NS-GRYMISR-DYLCVKVWDLHMESRPVETYPTHTK-------EENGQ--LRDPSNITALRVPQIKPIELTVEASPRRIF 302 (400)
Q Consensus 234 pd-g~~las~-~D~tIklWD~~~~~~~l~~~~~h~~-------~~~g~--~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~ 302 (400)
.- -++|+++ .|+.||.||+++-+.|+.++++|++ +|-.. +++++.|-++|+|++...+.
T Consensus 200 ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds---------- 269 (311)
T KOG0277|consen 200 KYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDS---------- 269 (311)
T ss_pred ccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchh----------
Confidence 84 5566765 5999999999998889999999963 33222 33577788888887632111
Q ss_pred ccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEcc-CCCEEEEe-cCCeEEEEeC
Q psy12356 303 ANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNS-DQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 303 ~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fsp-Dg~~las~-~D~~i~lW~~ 363 (400)
.+..+ .-|+.-|..+.||+ ++.++|++ .|..+.||+.
T Consensus 270 -----------------------~~e~~-~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 270 -----------------------AIETV-DHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred -----------------------hhhhh-hccceEEeccccccccCceeeecccccceeeecc
Confidence 00111 24777788888888 45688986 6999999984
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-24 Score=193.88 Aligned_cols=256 Identities=18% Similarity=0.220 Sum_probs=177.6
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
...|+++.|+++|.+|++++.|.+++|||..++. ..+++..+. .+|..++|....
T Consensus 14 ~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~-----------~~~ti~skk------------yG~~~~~Fth~~-- 68 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGK-----------QVKTINSKK------------YGVDLACFTHHS-- 68 (311)
T ss_pred CCceeEEEecCCCCEEEEecCCCeEEEEEcCCCc-----------eeeEeeccc------------ccccEEEEecCC--
Confidence 4679999999999999999999999999998642 344444433 246677886543
Q ss_pred ceEEEeeC--CCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 83 AHFLLSTN--DQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 83 ~~~l~ss~--D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
..++.++. |.+||..++.+.+ +.+|...|++++.+|.+ ..|+|+|.|++||+||+|..+ |.
T Consensus 69 ~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~-------cq----- 135 (311)
T KOG1446|consen 69 NTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKK-------CQ----- 135 (311)
T ss_pred ceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCCC-------Cc-----
Confidence 25565554 9999999998877 46899999999999975 899999999999999999762 11
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
++.... ....+..-|.+...|.+...+.|+|||+|... .++...|.... +...+.+.+.|||||
T Consensus 136 ----g~l~~~-~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~d--kgPF~tf~i~~---------~~~~ew~~l~FS~dG 199 (311)
T KOG1446|consen 136 ----GLLNLS-GRPIAAFDPEGLIFALANGSELIKLYDLRSFD--KGPFTTFSITD---------NDEAEWTDLEFSPDG 199 (311)
T ss_pred ----eEEecC-CCcceeECCCCcEEEEecCCCeEEEEEecccC--CCCceeEccCC---------CCccceeeeEEcCCC
Confidence 000000 00111223566655555556699999999753 23333332111 223578899999999
Q ss_pred cEEE-EecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEE
Q psy12356 237 RYMI-SRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISV 315 (400)
Q Consensus 237 ~~la-s~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 315 (400)
++|+ +++.+.+.+-|..+|. .+.+|++|.+. .
T Consensus 200 K~iLlsT~~s~~~~lDAf~G~-~~~tfs~~~~~-----------------------------------~----------- 232 (311)
T KOG1446|consen 200 KSILLSTNASFIYLLDAFDGT-VKSTFSGYPNA-----------------------------------G----------- 232 (311)
T ss_pred CEEEEEeCCCcEEEEEccCCc-EeeeEeeccCC-----------------------------------C-----------
Confidence 9875 7788899999999875 45566444210 0
Q ss_pred cCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCeeEEEEeecCCcccc
Q psy12356 316 NSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQSFNIVDIKPTNMEE 382 (400)
Q Consensus 316 s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~~~~~~~~~~~~~~~ 382 (400)
..--+-.|+|||+.++++ +|++|.+|+++++. ++.-.+++++-.
T Consensus 233 --------------------~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~---~v~~~~~~~~~~ 277 (311)
T KOG1446|consen 233 --------------------NLPLSATFTPDSKFVLSGSDDGTIHVWNLETGK---KVAVLRGPNGGP 277 (311)
T ss_pred --------------------CcceeEEECCCCcEEEEecCCCcEEEEEcCCCc---EeeEecCCCCCC
Confidence 000257789999999997 79999999998644 343344444433
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=201.26 Aligned_cols=273 Identities=17% Similarity=0.260 Sum_probs=181.4
Q ss_pred EEEEEEC---CCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 6 REASQRF---SDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 6 v~~v~fs---pdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
|-.++|| |||-+|.|++.|+.-.+-+=+++ . -+.+|.||..+ |.+...+.+-
T Consensus 17 vvdl~~s~itp~g~flisa~kd~~pmlr~g~tg---------d--wigtfeghkga------------vw~~~l~~na-- 71 (334)
T KOG0278|consen 17 VVDLAFSPITPDGYFLISASKDGKPMLRNGDTG---------D--WIGTFEGHKGA------------VWSATLNKNA-- 71 (334)
T ss_pred eeEEeccCCCCCceEEEEeccCCCchhccCCCC---------C--cEEeeeccCcc------------eeeeecCchh--
Confidence 5678888 59999999999999998876653 2 36799999843 6555554332
Q ss_pred ceEEEeeCCCeEEEEEccCCC-c--ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc----cccccceeccCc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN-M--EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL----CDRHSKCLIEGT 155 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~-~--~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~----~~~~~~~~~~~~ 155 (400)
.+-++++.|-+.||||.-+|. + -.|...|.+++|+.|. +.|++|+.+..+|++|+....- ...|...+++..
T Consensus 72 ~~aasaaadftakvw~a~tgdelhsf~hkhivk~~af~~ds-~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~ 150 (334)
T KOG0278|consen 72 TRAASAAADFTAKVWDAVTGDELHSFEHKHIVKAVAFSQDS-NYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVL 150 (334)
T ss_pred hhhhhhcccchhhhhhhhhhhhhhhhhhhheeeeEEecccc-hhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEE
Confidence 234456789999999998886 2 3567889999999985 7899999999999999988742 122322232221
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
-|. .+..+ .+.+.|++|||||.|++..- +.++ ...+|.++..|+|
T Consensus 151 wc~-----------------eD~~i-LSSadd~tVRLWD~rTgt~v----~sL~-------------~~s~VtSlEvs~d 195 (334)
T KOG0278|consen 151 WCH-----------------EDKCI-LSSADDKTVRLWDHRTGTEV----QSLE-------------FNSPVTSLEVSQD 195 (334)
T ss_pred Eec-----------------cCceE-EeeccCCceEEEEeccCcEE----EEEe-------------cCCCCcceeeccC
Confidence 111 11111 12257999999999987642 1121 1257999999999
Q ss_pred CcEEEEecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEE
Q psy12356 236 GRYMISRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISV 315 (400)
Q Consensus 236 g~~las~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 315 (400)
|++|..+.-++|+.||..+-. +|+.+...... .+- ++.|....+ ..++-+.++.-..|
T Consensus 196 G~ilTia~gssV~Fwdaksf~-~lKs~k~P~nV-----------~SA---SL~P~k~~f-------VaGged~~~~kfDy 253 (334)
T KOG0278|consen 196 GRILTIAYGSSVKFWDAKSFG-LLKSYKMPCNV-----------ESA---SLHPKKEFF-------VAGGEDFKVYKFDY 253 (334)
T ss_pred CCEEEEecCceeEEecccccc-ceeeccCcccc-----------ccc---cccCCCceE-------EecCcceEEEEEec
Confidence 999988877899999999864 67766432110 000 112221111 11222333333333
Q ss_pred cCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 316 NSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 316 s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
..+..+ ..+..||.++|.+|.|||||...||+ .||+||||+....+
T Consensus 254 ~TgeEi------~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 254 NTGEEI------GSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred cCCcee------eecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 322111 11235899999999999999999997 79999999986543
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-25 Score=203.43 Aligned_cols=252 Identities=17% Similarity=0.227 Sum_probs=163.9
Q ss_pred ceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCC
Q psy12356 46 YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDC 121 (400)
Q Consensus 46 ~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~ 121 (400)
++..+.+++|. ++|.+|++-|..+ -+++++.|++|+|||+.+|++ .+|-..|..|+|++.+
T Consensus 141 wKl~rVi~gHl------------gWVr~vavdP~n~--wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rH- 205 (460)
T KOG0285|consen 141 WKLYRVISGHL------------GWVRSVAVDPGNE--WFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRH- 205 (460)
T ss_pred ceehhhhhhcc------------ceEEEEeeCCCce--eEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccC-
Confidence 44455666665 7899999998642 566688999999999999985 3566789999999987
Q ss_pred CEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccccccc
Q psy12356 122 NLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALC 201 (400)
Q Consensus 122 ~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~ 201 (400)
-++.+++.|++||.||+..++.++....++.. ++.+ ...|....++++++|.++|+||+|+....
T Consensus 206 pYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~-----V~~L----------~lhPTldvl~t~grDst~RvWDiRtr~~V 270 (460)
T KOG0285|consen 206 PYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSG-----VYCL----------DLHPTLDVLVTGGRDSTIRVWDIRTRASV 270 (460)
T ss_pred ceEEEecCCCeeEEEechhhhhHHHhccccce-----eEEE----------eccccceeEEecCCcceEEEeeecccceE
Confidence 47899999999999999998765432222211 1111 12355556778889999999999986432
Q ss_pred CcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE-EecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCc
Q psy12356 202 DRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI-SRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNIT 280 (400)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la-s~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~ 280 (400)
..+.||.++|.+|.+.|-.-.++ ++-|.||||||++.+. ...++..|..
T Consensus 271 ----------------~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agk-t~~tlt~hkk------------- 320 (460)
T KOG0285|consen 271 ----------------HVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGK-TMITLTHHKK------------- 320 (460)
T ss_pred ----------------EEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCc-eeEeeecccc-------------
Confidence 22568999999999998555555 5679999999999874 3445555531
Q ss_pred eeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEecCCeEEE
Q psy12356 281 ALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSADDLRINL 360 (400)
Q Consensus 281 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~D~~i~l 360 (400)
+++.-.+.|.+.++ +.+....|.+..+ |.|..+. + ..||...|++++.+.||-++.-++.+++-.
T Consensus 321 svral~lhP~e~~f--------ASas~dnik~w~~-p~g~f~~----n--lsgh~~iintl~~nsD~v~~~G~dng~~~f 385 (460)
T KOG0285|consen 321 SVRALCLHPKENLF--------ASASPDNIKQWKL-PEGEFLQ----N--LSGHNAIINTLSVNSDGVLVSGGDNGSIMF 385 (460)
T ss_pred eeeEEecCCchhhh--------hccCCccceeccC-Cccchhh----c--cccccceeeeeeeccCceEEEcCCceEEEE
Confidence 11110111111111 1111222222221 2222211 0 137888888888888887555557778888
Q ss_pred EeCccCCeeEEEE
Q psy12356 361 WHLEITDQSFNIV 373 (400)
Q Consensus 361 W~~~~~~~~~~~~ 373 (400)
||+++ ..+|+-.
T Consensus 386 wdwks-g~nyQ~~ 397 (460)
T KOG0285|consen 386 WDWKS-GHNYQRG 397 (460)
T ss_pred EecCc-Ccccccc
Confidence 88875 3344433
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-24 Score=215.71 Aligned_cols=120 Identities=15% Similarity=0.136 Sum_probs=97.6
Q ss_pred eeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.|++|+|+| |+++||+|+.|++|+|||+.+.... ....+++..+.+|+ ..|.+|+|+|++.
T Consensus 76 ~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~----~~~~~~l~~L~gH~------------~~V~~l~f~P~~~- 138 (493)
T PTZ00421 76 GPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLT----QNISDPIVHLQGHT------------KKVGIVSFHPSAM- 138 (493)
T ss_pred CCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccc----cccCcceEEecCCC------------CcEEEEEeCcCCC-
Confidence 4699999999 8999999999999999999754210 00112455778887 4599999999752
Q ss_pred ceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
..+++++.|++|+|||+++++ +..|...|.+++|+|++ .+|++++.|++|++||++++
T Consensus 139 ~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG-~lLatgs~Dg~IrIwD~rsg 200 (493)
T PTZ00421 139 NVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDG-SLLCTTSKDKKLNIIDPRDG 200 (493)
T ss_pred CEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCC-CEEEEecCCCEEEEEECCCC
Confidence 367778899999999999876 34567789999999985 78999999999999999987
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-24 Score=190.21 Aligned_cols=286 Identities=19% Similarity=0.190 Sum_probs=179.9
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
++-|+|+.+|.+|.||+.|.++.||=..+++ .+.++.||+. .|.++...-++. ++
T Consensus 13 lTqiKyN~eGDLlFscaKD~~~~vw~s~nGe-----------rlGty~GHtG------------avW~~Did~~s~--~l 67 (327)
T KOG0643|consen 13 LTQIKYNREGDLLFSCAKDSTPTVWYSLNGE-----------RLGTYDGHTG------------AVWCCDIDWDSK--HL 67 (327)
T ss_pred cceEEecCCCcEEEEecCCCCceEEEecCCc-----------eeeeecCCCc------------eEEEEEecCCcc--ee
Confidence 6789999999999999999999999875432 3668899984 488888765553 77
Q ss_pred EEeeCCCeEEEEEccCCCc-c--cccccEEEEEEecCCCCEEEEEeCC-----CeEEEEecccccccccccceeccCccc
Q psy12356 86 LLSTNDQSFNIVDIKPTNM-E--ELNEVITAAEFHPIDCNLFVYSSSK-----GTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~-~--~~~~~V~sv~f~p~~~~~las~s~D-----g~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
++++.|.+++|||+++|+. . .....|..+.|+++| ++++.+..+ +.|.++|++...-......++..+
T Consensus 68 iTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~g-n~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI--- 143 (327)
T KOG0643|consen 68 ITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGG-NLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKI--- 143 (327)
T ss_pred eeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCC-cEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEe---
Confidence 8899999999999999984 2 235679999999975 666665443 588999998652100000111111
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
..++++...+.-.+.+..+.++..||.|+.||++++...-. ....|...|+.++||||..
T Consensus 144 -----~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~---------------s~~~h~~~Ind~q~s~d~T 203 (327)
T KOG0643|consen 144 -----PTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVD---------------SDEEHSSKINDLQFSRDRT 203 (327)
T ss_pred -----cCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeee---------------chhhhccccccccccCCcc
Confidence 01111100001113333455667899999999998754211 1236778999999999999
Q ss_pred EEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceecccccc--ceEEEE
Q psy12356 238 YMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTY--HINSIS 314 (400)
Q Consensus 238 ~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~i~~i~ 314 (400)
+.+++ .|.+.||||+++-. ++++|..-. ..|.. .+.|... .+.+.|.+. .|+.-+
T Consensus 204 ~FiT~s~Dttakl~D~~tl~-v~Kty~te~-PvN~a-------------aisP~~d-------~VilgGGqeA~dVTTT~ 261 (327)
T KOG0643|consen 204 YFITGSKDTTAKLVDVRTLE-VLKTYTTER-PVNTA-------------AISPLLD-------HVILGGGQEAMDVTTTS 261 (327)
T ss_pred eEEecccCccceeeecccee-eEEEeeecc-cccce-------------ecccccc-------eEEecCCceeeeeeeec
Confidence 99875 69999999999864 677774321 00000 0011000 000011000 011100
Q ss_pred EcCCCcEEeeccc-chh------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 315 VNSDQLTVEASPR-GIF------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 315 ~s~dg~~~~~~~~-~~~------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
-. -|+. .+.-. .++ ..||-++||+|||+|||+.++|+ .|+.|||--.+
T Consensus 262 ~r-~GKF-EArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 262 TR-AGKF-EARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred cc-ccch-hhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 00 0000 00000 011 15999999999999999999997 69999998765
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=218.80 Aligned_cols=249 Identities=14% Similarity=0.216 Sum_probs=186.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+|..++|+|.-=.|.++-..|.|++||..-+ .++..|..|. +.|..|.|+|..+
T Consensus 10 sRvKglsFHP~rPwILtslHsG~IQlWDYRM~-----------tli~rFdeHd------------GpVRgv~FH~~qp-- 64 (1202)
T KOG0292|consen 10 SRVKGLSFHPKRPWILTSLHSGVIQLWDYRMG-----------TLIDRFDEHD------------GPVRGVDFHPTQP-- 64 (1202)
T ss_pred ccccceecCCCCCEEEEeecCceeeeehhhhh-----------hHHhhhhccC------------CccceeeecCCCC--
Confidence 57889999999999999999999999998743 2466788886 5699999999876
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.++++++|..||+|+.++.++ .+|...|+.+.||+. .--++|+|.|.|||||+..++ .|+..
T Consensus 65 lFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHhe-yPWIlSASDDQTIrIWNwqsr-------~~iav------ 130 (1202)
T KOG0292|consen 65 LFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHE-YPWILSASDDQTIRIWNWQSR-------KCIAV------ 130 (1202)
T ss_pred eEEecCCccEEEEEecccceehhhhccccceeEEeeccCC-CceEEEccCCCeEEEEeccCC-------ceEEE------
Confidence 777889999999999988763 578889999999996 557999999999999999888 33311
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
++||...|.|.+|+|....+
T Consensus 131 ------------------------------------------------------------ltGHnHYVMcAqFhptEDlI 150 (1202)
T KOG0292|consen 131 ------------------------------------------------------------LTGHNHYVMCAQFHPTEDLI 150 (1202)
T ss_pred ------------------------------------------------------------EecCceEEEeeccCCccceE
Confidence 23777899999999999999
Q ss_pred EEec-CCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCc--cceeccccccceEEEEEc
Q psy12356 240 ISRD-YLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASP--RRIFANAHTYHINSISVN 316 (400)
Q Consensus 240 as~~-D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~--~~~~~~~~~~~i~~i~~s 316 (400)
+|++ |.||||||+..-+. +...+.+ .+ .++.....++ .++.+.+ -+-.+.||+..||-++|.
T Consensus 151 VSaSLDQTVRVWDisGLRk--k~~~pg~-~e-~~~~~~~~~~-----------dLfg~~DaVVK~VLEGHDRGVNwaAfh 215 (1202)
T KOG0292|consen 151 VSASLDQTVRVWDISGLRK--KNKAPGS-LE-DQMRGQQGNS-----------DLFGQTDAVVKHVLEGHDRGVNWAAFH 215 (1202)
T ss_pred EEecccceEEEEeecchhc--cCCCCCC-ch-hhhhccccch-----------hhcCCcCeeeeeeecccccccceEEec
Confidence 9865 99999999985321 1111110 00 0000000000 0011001 011246899999999999
Q ss_pred CCCcEEeecccc----hh------------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccC
Q psy12356 317 SDQLTVEASPRG----IF------------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEIT 366 (400)
Q Consensus 317 ~dg~~~~~~~~~----~~------------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~ 366 (400)
|.-.++++++.. .| ..||.+.|.++-|+|....++|. .|++|||||++..
T Consensus 216 pTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kR 282 (1202)
T KOG0292|consen 216 PTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKR 282 (1202)
T ss_pred CCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccc
Confidence 988888765431 11 15999999999999999999995 7999999999753
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=217.59 Aligned_cols=204 Identities=20% Similarity=0.271 Sum_probs=157.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|+.++|||||++|++|+.|++|+|||+... ...++++.+|+.. |++++|+|+++ .
T Consensus 205 ~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~----------~~~~~~l~gH~~~------------v~~~~f~p~g~--~ 260 (456)
T KOG0266|consen 205 GVSDVAFSPDGSYLLSGSDDKTLRIWDLKDD----------GRNLKTLKGHSTY------------VTSVAFSPDGN--L 260 (456)
T ss_pred ceeeeEECCCCcEEEEecCCceEEEeeccCC----------CeEEEEecCCCCc------------eEEEEecCCCC--E
Confidence 5899999999999999999999999999432 2457899999854 99999999874 7
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc---cc
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT---NC 157 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~---~~ 157 (400)
+++++.|++|||||+++++ +..|.+.|++++|++++ +.|++++.|+.|++||+.++... |...+. ..
T Consensus 261 i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~-~~l~s~s~d~~i~vwd~~~~~~~-----~~~~~~~~~~~ 334 (456)
T KOG0266|consen 261 LVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDG-NLLVSASYDGTIRVWDLETGSKL-----CLKLLSGAENS 334 (456)
T ss_pred EEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCC-CEEEEcCCCccEEEEECCCCcee-----eeecccCCCCC
Confidence 7788999999999999877 35678899999999985 78999999999999999998511 111111 00
Q ss_pred -ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc---CeEEEEEC
Q psy12356 158 -NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS---SISDVKIS 233 (400)
Q Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~v~fS 233 (400)
.... +.+++++.....+..|+++++||++.+... +.+. +|.. .+.+..++
T Consensus 335 ~~~~~----------~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~----~~~~------------~~~~~~~~~~~~~~~ 388 (456)
T KOG0266|consen 335 APVTS----------VQFSPNGKYLLSASLDRTLKLWDLRSGKSV----GTYT------------GHSNLVRCIFSPTLS 388 (456)
T ss_pred CceeE----------EEECCCCcEEEEecCCCeEEEEEccCCcce----eeec------------ccCCcceeEeccccc
Confidence 1111 234577767777778999999999976542 2222 3333 34455568
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCCCCceeeecCC
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~~~~l~~~~~h 265 (400)
+.|++++++ .|+.|++||..++. .++.+++|
T Consensus 389 ~~~~~i~sg~~d~~v~~~~~~s~~-~~~~l~~h 420 (456)
T KOG0266|consen 389 TGGKLIYSGSEDGSVYVWDSSSGG-ILQRLEGH 420 (456)
T ss_pred CCCCeEEEEeCCceEEEEeCCccc-hhhhhcCC
Confidence 899999975 79999999999864 57788888
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=208.40 Aligned_cols=224 Identities=17% Similarity=0.243 Sum_probs=170.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|+++.||++|.+++||+.+|.|++|+.+- ..++.+++|.+ +.|.+++|+|. |.
T Consensus 139 s~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm------------nnVk~~~ahh~-----------eaIRdlafSpn--Ds 193 (464)
T KOG0284|consen 139 SPVRTMKWSHNGTWMISGDKGGMIKYWQPNM------------NNVKIIQAHHA-----------EAIRDLAFSPN--DS 193 (464)
T ss_pred ccceeEEEccCCCEEEEcCCCceEEecccch------------hhhHHhhHhhh-----------hhhheeccCCC--Cc
Confidence 4689999999999999999999999999762 22445666653 34899999993 56
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc--c
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN--C 157 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~--~ 157 (400)
+|+++|.|++|+|||..... +.+|.-.|.++.|||. +.++|++|.|..||+||.+++.. +.++-. +
T Consensus 194 kF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~-kgLiasgskDnlVKlWDprSg~c-------l~tlh~HKn 265 (464)
T KOG0284|consen 194 KFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPT-KGLIASGSKDNLVKLWDPRSGSC-------LATLHGHKN 265 (464)
T ss_pred eeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCc-cceeEEccCCceeEeecCCCcch-------hhhhhhccc
Confidence 99999999999999986543 4667778999999997 57999999999999999999943 332221 1
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC-C
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS-G 236 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd-g 236 (400)
++..+. +.+++..++++++|..++++|+|+.+.. . .+.+|...|.++.|+|= -
T Consensus 266 tVl~~~----------f~~n~N~Llt~skD~~~kv~DiR~mkEl----~------------~~r~Hkkdv~~~~WhP~~~ 319 (464)
T KOG0284|consen 266 TVLAVK----------FNPNGNWLLTGSKDQSCKVFDIRTMKEL----F------------TYRGHKKDVTSLTWHPLNE 319 (464)
T ss_pred eEEEEE----------EcCCCCeeEEccCCceEEEEehhHhHHH----H------------Hhhcchhhheeeccccccc
Confidence 122222 2366667888899999999999954421 1 13478899999999995 4
Q ss_pred cEEEE-ecCCeEEEEeCCCCCCceeeec-CCC-------cCCCCcccC-CCCCceeecCcc
Q psy12356 237 RYMIS-RDYLCVKVWDLHMESRPVETYP-THT-------KEENGQLRD-PSNITALRVPQI 287 (400)
Q Consensus 237 ~~las-~~D~tIklWD~~~~~~~l~~~~-~h~-------~~~~g~~~~-~~~~~~i~l~~~ 287 (400)
.++++ +.|+.|..|.+... .|+..++ +|. ++|=|.+++ ++++.++|+|.-
T Consensus 320 ~lftsgg~Dgsvvh~~v~~~-~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 320 SLFTSGGSDGSVVHWVVGLE-EPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred cceeeccCCCceEEEecccc-ccccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 45565 46999999999843 4665553 563 578888764 889999998864
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-24 Score=207.60 Aligned_cols=196 Identities=16% Similarity=0.177 Sum_probs=152.5
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|++.+|=+--+.+++||.|..||||+.++.+ -++.|.+|.. -|.+|+.+|..+ .+
T Consensus 58 vRa~kfiaRknWiv~GsDD~~IrVfnynt~e-----------kV~~FeAH~D------------yIR~iavHPt~P--~v 112 (794)
T KOG0276|consen 58 VRAAKFIARKNWIVTGSDDMQIRVFNYNTGE-----------KVKTFEAHSD------------YIRSIAVHPTLP--YV 112 (794)
T ss_pred hhhheeeeccceEEEecCCceEEEEecccce-----------eeEEeecccc------------ceeeeeecCCCC--eE
Confidence 5677788888899999999999999998643 3678999973 267888999876 78
Q ss_pred EEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 86 LLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++|+|.+||+||.+.+= +++|...|+.|+|+|.+.+.|||+|.|+|||+|.+-......+...+..+. +|-
T Consensus 113 LtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGV-N~V-- 189 (794)
T KOG0276|consen 113 LTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGV-NCV-- 189 (794)
T ss_pred EecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCc-ceE--
Confidence 899999999999998652 578999999999999999999999999999999998763211111111111 000
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
. . +..++.+-..+|+.|.+|++||.++..+. ++ ++||++-|+.+.|+|.-.+++
T Consensus 190 d--y--------y~~gdkpylIsgaDD~tiKvWDyQtk~CV----~T------------LeGHt~Nvs~v~fhp~lpiii 243 (794)
T KOG0276|consen 190 D--Y--------YTGGDKPYLISGADDLTIKVWDYQTKSCV----QT------------LEGHTNNVSFVFFHPELPIII 243 (794)
T ss_pred E--e--------ccCCCcceEEecCCCceEEEeecchHHHH----HH------------hhcccccceEEEecCCCcEEE
Confidence 0 0 11234556677889999999999986653 22 458899999999999999999
Q ss_pred Ee-cCCeEEEEeCCCC
Q psy12356 241 SR-DYLCVKVWDLHME 255 (400)
Q Consensus 241 s~-~D~tIklWD~~~~ 255 (400)
|+ .|||+|||...+-
T Consensus 244 sgsEDGTvriWhs~Ty 259 (794)
T KOG0276|consen 244 SGSEDGTVRIWNSKTY 259 (794)
T ss_pred EecCCccEEEecCcce
Confidence 85 7999999998874
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.2e-24 Score=187.62 Aligned_cols=211 Identities=18% Similarity=0.285 Sum_probs=150.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|++|+|||.|++||+||.|.++-||.-.. ++++++.++.||+.+ |.+|+|+++++ .
T Consensus 63 sVRsvAwsp~g~~La~aSFD~t~~Iw~k~~---------~efecv~~lEGHEnE------------VK~Vaws~sG~--~ 119 (312)
T KOG0645|consen 63 SVRSVAWSPHGRYLASASFDATVVIWKKED---------GEFECVATLEGHENE------------VKCVAWSASGN--Y 119 (312)
T ss_pred eeeeeeecCCCcEEEEeeccceEEEeecCC---------CceeEEeeeeccccc------------eeEEEEcCCCC--E
Confidence 689999999999999999999999998764 467889999999865 99999999874 6
Q ss_pred EEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
+++++.|++|-||.++.+. +++|+.-|-.|.|||. ..+|+|+|.|++||+|+-..+ .-..|..++.++
T Consensus 120 LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt-~dlL~S~SYDnTIk~~~~~~d----ddW~c~~tl~g~ 194 (312)
T KOG0645|consen 120 LATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPT-EDLLFSCSYDNTIKVYRDEDD----DDWECVQTLDGH 194 (312)
T ss_pred EEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCC-cceeEEeccCCeEEEEeecCC----CCeeEEEEecCc
Confidence 7779999999999997543 4678888999999997 479999999999999997632 112344444432
Q ss_pred --ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccc---------------------cccCcccccccC---C
Q psy12356 158 --NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAA---------------------ALCDRHSKFFEE---P 211 (400)
Q Consensus 158 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~---------------------~~~~~~~~~~~~---~ 211 (400)
..|.+.|. +.+...++.+.|++++||-.... ...+..++.|.. |
T Consensus 195 ~~TVW~~~F~----------~~G~rl~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~ 264 (312)
T KOG0645|consen 195 ENTVWSLAFD----------NIGSRLVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDSP 264 (312)
T ss_pred cceEEEEEec----------CCCceEEEecCCcceEeeeeccCcchhcccceEeeeecccceEeccCCCEEEEEEecCCC
Confidence 56666654 33333334456777777763221 112333333322 1
Q ss_pred CCCCC---cccccccccCeEEEEECCC-CcEEEE-ecCCeEEEEeCC
Q psy12356 212 EDPTN---KSFFSEIISSISDVKISNS-GRYMIS-RDYLCVKVWDLH 253 (400)
Q Consensus 212 ~~~~~---~~~~~~h~~~V~~v~fSpd-g~~las-~~D~tIklWD~~ 253 (400)
..|.. ...-..|...|++|+|+|. ..+|++ ++||+|++|.+.
T Consensus 265 d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 265 DEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred CCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 11111 1112357789999999995 456665 578999999864
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-24 Score=202.23 Aligned_cols=254 Identities=19% Similarity=0.306 Sum_probs=180.5
Q ss_pred eeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
++|+.+++-| +.+.||+++..+.|.|||+++...- ++..+..++--++.||+.+ -..+.|++.. .
T Consensus 125 gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~-~~~~~~~~Pdl~L~gH~~e------------g~glsWn~~~-~ 190 (422)
T KOG0264|consen 125 GEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSK-PKASGECRPDLRLKGHEKE------------GYGLSWNRQQ-E 190 (422)
T ss_pred ccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCc-ccccccCCCceEEEeeccc------------cccccccccc-c
Confidence 5677888888 5678899999999999999864311 1111223333467899753 3568999875 4
Q ss_pred ceEEEeeCCCeEEEEEccCCC-----------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccccee
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN-----------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCL 151 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~-----------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~ 151 (400)
+.+|+++.|++|.+||+.... +..|...|..|+|||.+.++|++++.|+.+.|||+|++ ... +
T Consensus 191 g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~----~- 264 (422)
T KOG0264|consen 191 GTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSK----P- 264 (422)
T ss_pred eeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CCC----C-
Confidence 688899999999999996543 23467789999999999999999999999999999974 100 0
Q ss_pred ccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEE
Q psy12356 152 IEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVK 231 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 231 (400)
. ....+|.++|++|+
T Consensus 265 --------------------------------------------------~---------------~~~~ah~~~vn~~~ 279 (422)
T KOG0264|consen 265 --------------------------------------------------S---------------HSVKAHSAEVNCVA 279 (422)
T ss_pred --------------------------------------------------c---------------ccccccCCceeEEE
Confidence 0 00126889999999
Q ss_pred ECCCCc-EEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCc--ccCCCCCceeecCcccccceeeccCccc
Q psy12356 232 ISNSGR-YMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQ--LRDPSNITALRVPQIKPIELTVEASPRR 300 (400)
Q Consensus 232 fSpdg~-~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~--~~~~~~~~~i~l~~~~~~~~~~~~~~~~ 300 (400)
|+|-+. +||++ .|++|+|||+|+-..++.+|++|. ++|... +++++.++.+.+|++...+..-...
T Consensus 280 fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~e--- 356 (422)
T KOG0264|consen 280 FNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPE--- 356 (422)
T ss_pred eCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChh---
Confidence 999655 56665 599999999999888999999995 345433 3456788888888775332110000
Q ss_pred eeccccccceEEEEEcCCCcEEeecccchh-hcccccceeEEEEccCCCEEE-Ee-cCCeEEEEeCc
Q psy12356 301 IFANAHTYHINSISVNSDQLTVEASPRGIF-ADAHTYHISSTSVNSDQETYL-SA-DDLRINLWHLE 364 (400)
Q Consensus 301 ~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~-~~gh~~~V~~i~fspDg~~la-s~-~D~~i~lW~~~ 364 (400)
...||. ...++ ..||+..|+..+|+|...+++ |+ .|+.++||+..
T Consensus 357 --------------da~dgp-----pEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 357 --------------DAEDGP-----PELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred --------------hhccCC-----cceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 000000 00011 258999999999999998655 54 69999999875
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.1e-24 Score=201.03 Aligned_cols=220 Identities=19% Similarity=0.278 Sum_probs=163.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.++.|-.||++||.|+..|.|+|||+.+ -.+++.+++|++ +|..+.|+|+.+ +
T Consensus 70 ~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~-----------r~iLR~~~ah~a------------pv~~~~f~~~d~--t 124 (487)
T KOG0310|consen 70 VVYSVDFRSDGRLLAAGDESGHVKVFDMKS-----------RVILRQLYAHQA------------PVHVTKFSPQDN--T 124 (487)
T ss_pred ceeEEEeecCCeEEEccCCcCcEEEecccc-----------HHHHHHHhhccC------------ceeEEEecccCC--e
Confidence 478899999999999999999999999542 234678889985 489999999763 5
Q ss_pred EE-EeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 85 FL-LSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l-~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
++ ++++|+.+++||+.+.. +.+|+..|++.+|+|..+.+++|||.||+||+||+|.... .+
T Consensus 125 ~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~------~v-------- 190 (487)
T KOG0310|consen 125 MLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTS------RV-------- 190 (487)
T ss_pred EEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCc------ee--------
Confidence 55 57889999999998875 3568899999999998777999999999999999987610 00
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+ .|..+|.+|.|-|.|.++
T Consensus 191 ----------------------------------------------~el-------------nhg~pVe~vl~lpsgs~i 211 (487)
T KOG0310|consen 191 ----------------------------------------------VEL-------------NHGCPVESVLALPSGSLI 211 (487)
T ss_pred ----------------------------------------------EEe-------------cCCCceeeEEEcCCCCEE
Confidence 000 355689999999999999
Q ss_pred EEecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCC
Q psy12356 240 ISRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQ 319 (400)
Q Consensus 240 as~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg 319 (400)
|+++...|||||+.+|++.+..+..|. -.|+++++..|+
T Consensus 212 asAgGn~vkVWDl~~G~qll~~~~~H~-----------------------------------------KtVTcL~l~s~~ 250 (487)
T KOG0310|consen 212 ASAGGNSVKVWDLTTGGQLLTSMFNHN-----------------------------------------KTVTCLRLASDS 250 (487)
T ss_pred EEcCCCeEEEEEecCCceehhhhhccc-----------------------------------------ceEEEEEeecCC
Confidence 998889999999998876555443342 222333333333
Q ss_pred cEEeeccc----c---------hhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 320 LTVEASPR----G---------IFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 320 ~~~~~~~~----~---------~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
+.|.+++. + +...+-.++|.+++.|||++.++.| .||.+-+=+.
T Consensus 251 ~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 251 TRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred ceEeecccccceEEEEccceEEEEeeecccceeeEEecCCCceEEEecccceeeeehh
Confidence 22222111 0 0112446799999999999999998 6887655543
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=197.71 Aligned_cols=186 Identities=15% Similarity=0.214 Sum_probs=143.8
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+|.|.|+.| |.+.|+|||.|.+|+|||.++++ +++++-+|.. .|..+.|+.
T Consensus 237 tGSVLCLqy--d~rviisGSSDsTvrvWDv~tge-----------~l~tlihHce------------aVLhlrf~n---- 287 (499)
T KOG0281|consen 237 TGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGE-----------PLNTLIHHCE------------AVLHLRFSN---- 287 (499)
T ss_pred CCcEEeeec--cceEEEecCCCceEEEEeccCCc-----------hhhHHhhhcc------------eeEEEEEeC----
Confidence 467888887 45699999999999999999753 5678888874 489999974
Q ss_pred ceEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
+.++++|.|.+|++||+.... +.+|...|+.|.|+. .+++|+|.|.|||+|++.++..++....+.
T Consensus 288 g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~---kyIVsASgDRTikvW~~st~efvRtl~gHk---- 360 (499)
T KOG0281|consen 288 GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWSTSTCEFVRTLNGHK---- 360 (499)
T ss_pred CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc---ceEEEecCCceEEEEeccceeeehhhhccc----
Confidence 378899999999999997654 356788899999965 489999999999999999995433322221
Q ss_pred ccceeceeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 156 NCNCQGLIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
.++...+ .++.+.+|+.|++|||||+..|++. +. ++||..-|.+|.|
T Consensus 361 --------------RGIAClQYr~rlvVSGSSDntIRlwdi~~G~cL----Rv------------LeGHEeLvRciRF-- 408 (499)
T KOG0281|consen 361 --------------RGIACLQYRDRLVVSGSSDNTIRLWDIECGACL----RV------------LEGHEELVRCIRF-- 408 (499)
T ss_pred --------------ccceehhccCeEEEecCCCceEEEEeccccHHH----HH------------HhchHHhhhheee--
Confidence 1121112 3355777889999999999988763 33 3477788999999
Q ss_pred CCcEEEEe-cCCeEEEEeCCCCC
Q psy12356 235 SGRYMISR-DYLCVKVWDLHMES 256 (400)
Q Consensus 235 dg~~las~-~D~tIklWD~~~~~ 256 (400)
|.+.++|+ -||+|||||+..+-
T Consensus 409 d~krIVSGaYDGkikvWdl~aal 431 (499)
T KOG0281|consen 409 DNKRIVSGAYDGKIKVWDLQAAL 431 (499)
T ss_pred cCceeeeccccceEEEEeccccc
Confidence 56678876 58999999999864
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=197.78 Aligned_cols=258 Identities=15% Similarity=0.188 Sum_probs=175.4
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
+-|..|||||+||++||.||-|.|||..+++.. +...++.--.|.-|. ..|.++.|+.|+. .+
T Consensus 216 ~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlr---KDLkYQAqd~fMMmd------------~aVlci~FSRDsE--Ml 278 (508)
T KOG0275|consen 216 VECARFSPDGQYLVSGSVDGFIEVWNYTTGKLR---KDLKYQAQDNFMMMD------------DAVLCISFSRDSE--ML 278 (508)
T ss_pred hhheeeCCCCceEeeccccceeeeehhccchhh---hhhhhhhhcceeecc------------cceEEEeecccHH--Hh
Confidence 568899999999999999999999999876421 111111111233333 4599999998874 56
Q ss_pred EEeeCCCeEEEEEccCCCc-----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 86 LLSTNDQSFNIVDIKPTNM-----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~-----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
++++.||.|++|.+.+|.| +.|+..|++++|+.|+ ..++++|.|.++|+--+.+|+.+
T Consensus 279 AsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~-SqiLS~sfD~tvRiHGlKSGK~L---------------- 341 (508)
T KOG0275|consen 279 ASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDN-SQILSASFDQTVRIHGLKSGKCL---------------- 341 (508)
T ss_pred hccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCc-chhhcccccceEEEeccccchhH----------------
Confidence 6788999999999999984 3577789999999985 67899999999999888777321
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
+. |.||+..|+.+.|++||..++
T Consensus 342 ---------------------------------------------KE------------frGHsSyvn~a~ft~dG~~ii 364 (508)
T KOG0275|consen 342 ---------------------------------------------KE------------FRGHSSYVNEATFTDDGHHII 364 (508)
T ss_pred ---------------------------------------------HH------------hcCccccccceEEcCCCCeEE
Confidence 11 347889999999999999999
Q ss_pred E-ecCCeEEEEeCCCCCCceeeecCCC--cCCCCc---------ccCCCCCceeecCcccccceeeccCccceeccc--c
Q psy12356 241 S-RDYLCVKVWDLHMESRPVETYPTHT--KEENGQ---------LRDPSNITALRVPQIKPIELTVEASPRRIFANA--H 306 (400)
Q Consensus 241 s-~~D~tIklWD~~~~~~~l~~~~~h~--~~~~g~---------~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~--~ 306 (400)
+ ++|++||+|+.++. .|+.+|+.-. ...+.. ++......++.+-+. .|+--+.+..| -
T Consensus 365 saSsDgtvkvW~~Ktt-eC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-------qGQvVrsfsSGkRE 436 (508)
T KOG0275|consen 365 SASSDGTVKVWHGKTT-ECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-------QGQVVRSFSSGKRE 436 (508)
T ss_pred EecCCccEEEecCcch-hhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec-------cceEEeeeccCCcc
Confidence 7 57999999999986 5788886432 111111 111111112211111 11111111111 1
Q ss_pred ccceEEEEEcCCCcEEeeccc--c------------hhhcccccceeEEEEccCCCEEEE-ecCCeEEEEe
Q psy12356 307 TYHINSISVNSDQLTVEASPR--G------------IFADAHTYHISSTSVNSDQETYLS-ADDLRINLWH 362 (400)
Q Consensus 307 ~~~i~~i~~s~dg~~~~~~~~--~------------~~~~gh~~~V~~i~fspDg~~las-~~D~~i~lW~ 362 (400)
.+..-...+||-|.++-..+. . ...+-|...|-.++-+|....||| +.|+.+++|.
T Consensus 437 gGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 437 GGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred CCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 112345578888887643211 1 112468888889999999999999 5899999995
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-23 Score=207.87 Aligned_cols=195 Identities=11% Similarity=0.138 Sum_probs=132.6
Q ss_pred CCCCCeEEE------ecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 12 FSDGELLAT------GDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 12 spdG~~Las------~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
..+++++|. |+.++.|+||+.... ..+..+.+|.. .|.+++|+|+. +..+
T Consensus 35 a~n~~~~A~~w~~~gGG~~gvI~L~~~~r~-----------~~v~~L~gH~~------------~V~~lafsP~~-~~lL 90 (568)
T PTZ00420 35 ACSSGFVAVPWEVEGGGLIGAIRLENQMRK-----------PPVIKLKGHTS------------SILDLQFNPCF-SEIL 90 (568)
T ss_pred eeCCCeEEEEEEcCCCCceeEEEeeecCCC-----------ceEEEEcCCCC------------CEEEEEEcCCC-CCEE
Confidence 344555553 456778888886531 23567888874 49999999973 2367
Q ss_pred EEeeCCCeEEEEEccCCC------------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 86 LLSTNDQSFNIVDIKPTN------------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~------------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
++++.|++|+|||+.++. +..|...|++++|||++..++++++.|++|++||++++..... + .
T Consensus 91 ASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~----i-~ 165 (568)
T PTZ00420 91 ASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQ----I-N 165 (568)
T ss_pred EEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEE----E-e
Confidence 788999999999997542 2346778999999998766778999999999999998843211 0 0
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe-----E
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI-----S 228 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V-----~ 228 (400)
. ...+..+ ...+++...++++.|+.|+|||++++... ..+ .+|.+.+ .
T Consensus 166 ~-~~~V~Sl----------swspdG~lLat~s~D~~IrIwD~Rsg~~i----~tl------------~gH~g~~~s~~v~ 218 (568)
T PTZ00420 166 M-PKKLSSL----------KWNIKGNLLSGTCVGKHMHIIDPRKQEIA----SSF------------HIHDGGKNTKNIW 218 (568)
T ss_pred c-CCcEEEE----------EECCCCCEEEEEecCCEEEEEECCCCcEE----EEE------------ecccCCceeEEEE
Confidence 0 0112222 22366666677778999999999986532 122 2454433 3
Q ss_pred EEEECCCCcEEEE-ecC----CeEEEEeCCCCCCceeee
Q psy12356 229 DVKISNSGRYMIS-RDY----LCVKVWDLHMESRPVETY 262 (400)
Q Consensus 229 ~v~fSpdg~~las-~~D----~tIklWD~~~~~~~l~~~ 262 (400)
...|+|++.+|++ +.| ++|+|||++....++..+
T Consensus 219 ~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~ 257 (568)
T PTZ00420 219 IDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTM 257 (568)
T ss_pred eeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEE
Confidence 3457899998886 434 489999999755566543
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-23 Score=205.74 Aligned_cols=219 Identities=15% Similarity=0.207 Sum_probs=161.5
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
|-|+.|.|+|++-+.+||+.|.+|+||+... .+++-++.||-. | |..+.|++.-+
T Consensus 52 GpVRgv~FH~~qplFVSGGDDykIkVWnYk~-----------rrclftL~GHlD---Y---------VRt~~FHheyP-- 106 (1202)
T KOG0292|consen 52 GPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT-----------RRCLFTLLGHLD---Y---------VRTVFFHHEYP-- 106 (1202)
T ss_pred CccceeeecCCCCeEEecCCccEEEEEeccc-----------ceehhhhccccc---e---------eEEeeccCCCc--
Confidence 5689999999999999999999999999874 245668889963 2 66788887655
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc---cccc-ccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA---LCDR-HSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~---~~~~-~~~~~~~~~ 155 (400)
=++++|+|.|||||+..++.+ .+|...|.+.+|||.. .+++|+|.|.|||+||+..=+ .... .........
T Consensus 107 WIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptE-DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~ 185 (1202)
T KOG0292|consen 107 WILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTE-DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQ 185 (1202)
T ss_pred eEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCcc-ceEEEecccceEEEEeecchhccCCCCCCchhhhhccc
Confidence 688899999999999999873 6788999999999974 789999999999999985421 0000 000000000
Q ss_pred c-ccee------ceeccCchhhhh---hcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc
Q psy12356 156 N-CNCQ------GLIVPESKREER---QSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS 225 (400)
Q Consensus 156 ~-~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 225 (400)
. .... -..+-+++..++ .+.|......+|+.|..|++|.+...+. |+-. ...+|.+
T Consensus 186 ~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKa-------WEvD-------tcrgH~n 251 (1202)
T KOG0292|consen 186 GNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA-------WEVD-------TCRGHYN 251 (1202)
T ss_pred cchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccc-------eeeh-------hhhcccC
Confidence 0 0000 011233444444 4456677788889999999999876543 3211 1358999
Q ss_pred CeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeec
Q psy12356 226 SISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 226 ~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~ 263 (400)
.|++|-|+|...+++| +.|++|||||+... .++++|+
T Consensus 252 nVssvlfhp~q~lIlSnsEDksirVwDm~kR-t~v~tfr 289 (1202)
T KOG0292|consen 252 NVSSVLFHPHQDLILSNSEDKSIRVWDMTKR-TSVQTFR 289 (1202)
T ss_pred CcceEEecCccceeEecCCCccEEEEecccc-cceeeee
Confidence 9999999999999887 67999999999975 4688874
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.2e-23 Score=187.76 Aligned_cols=246 Identities=22% Similarity=0.306 Sum_probs=170.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.++.||.||.+||||+.+|.|+||+..++.. ..++..-- +.+..+.|+|... .
T Consensus 108 SVt~~~FshdgtlLATGdmsG~v~v~~~stg~~-----------~~~~~~e~------------~dieWl~WHp~a~--i 162 (399)
T KOG0296|consen 108 SVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGE-----------QWKLDQEV------------EDIEWLKWHPRAH--I 162 (399)
T ss_pred ceEEEEEccCceEEEecCCCccEEEEEcccCce-----------EEEeeccc------------CceEEEEeccccc--E
Confidence 589999999999999999999999999987531 11222111 2367788888652 4
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccc-------eec-
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSK-------CLI- 152 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~-------~~~- 152 (400)
+++++.||.+-.|.+.++. +.+|+..+++-.|.|+| ++++++..||+|++||+.++....+.+. |+.
T Consensus 163 llAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdG-Kr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~ 241 (399)
T KOG0296|consen 163 LLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDG-KRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISL 241 (399)
T ss_pred EEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCC-ceEEEEecCceEEEEecCCCceeEEecccccCcCCcccc
Confidence 4557889999999998743 46788899999999985 7899999999999999999864322110 000
Q ss_pred --------cC----c------------ccce-eceeccCch---hhhhhc---ccCcceeecCCCCCeEEEeeccccccc
Q psy12356 153 --------EG----T------------NCNC-QGLIVPESK---REERQS---SQNRREKEDNRRKPAIRLCDMRAAALC 201 (400)
Q Consensus 153 --------~~----~------------~~~~-~~~~~~~~~---~~~~~~---~~~~~~~~~~~~dg~i~lWD~~~~~~~ 201 (400)
.. . +++. ....+.++. .+.+.+ +......|.|+.||+|-|||+.....-
T Consensus 242 ~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R 321 (399)
T KOG0296|consen 242 NLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLR 321 (399)
T ss_pred ccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhh
Confidence 00 0 0000 000000011 122222 223455677889999999999864321
Q ss_pred CcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE-EecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCc
Q psy12356 202 DRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI-SRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNIT 280 (400)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la-s~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~ 280 (400)
. +-.|..+|..+.|-+ ..+|+ ++.+++||+||.++++ ++.+|.
T Consensus 322 ----------------~-~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~-l~~~y~----------------- 365 (399)
T KOG0296|consen 322 ----------------H-ICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQ-LKFTYT----------------- 365 (399)
T ss_pred ----------------e-eccCCCceEEEEEcC-cchheeeccCceEEeeeccccc-eEEEEe-----------------
Confidence 1 125778899999999 45555 5689999999999974 444442
Q ss_pred eeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEE
Q psy12356 281 ALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRIN 359 (400)
Q Consensus 281 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~ 359 (400)
||+..|..++.+||++.++|+ +|++.+
T Consensus 366 ----------------------------------------------------GH~~~Il~f~ls~~~~~vvT~s~D~~a~ 393 (399)
T KOG0296|consen 366 ----------------------------------------------------GHQMGILDFALSPQKRLVVTVSDDNTAL 393 (399)
T ss_pred ----------------------------------------------------cCchheeEEEEcCCCcEEEEecCCCeEE
Confidence 566667788889999999996 799999
Q ss_pred EEeCc
Q psy12356 360 LWHLE 364 (400)
Q Consensus 360 lW~~~ 364 (400)
|++..
T Consensus 394 VF~v~ 398 (399)
T KOG0296|consen 394 VFEVP 398 (399)
T ss_pred EEecC
Confidence 98754
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=187.95 Aligned_cols=247 Identities=17% Similarity=0.203 Sum_probs=165.8
Q ss_pred CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe-ccCCceEEEeeCCCe
Q psy12356 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR-RKNQAHFLLSTNDQS 93 (400)
Q Consensus 15 G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp-~~~~~~~l~ss~D~t 93 (400)
++.|.||+-||+++|||..+ +...++.||+. .|.+++|.- +...+.++++|.|.+
T Consensus 115 ~~~IltgsYDg~~riWd~~G------------k~~~~~~Ght~------------~ik~v~~v~~n~~~~~fvsas~Dqt 170 (423)
T KOG0313|consen 115 SKWILTGSYDGTSRIWDLKG------------KSIKTIVGHTG------------PIKSVAWVIKNSSSCLFVSASMDQT 170 (423)
T ss_pred CceEEEeecCCeeEEEecCC------------ceEEEEecCCc------------ceeeeEEEecCCccceEEEecCCce
Confidence 78999999999999999873 34567889984 477777743 332356888999999
Q ss_pred EEEEEccCCC--------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceecc
Q psy12356 94 FNIVDIKPTN--------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVP 165 (400)
Q Consensus 94 I~lWd~~~~~--------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (400)
++||.++.++ +++|...|-+|+-.+++ .+|+|||-|.+|++|+..+... .. +.. .
T Consensus 171 l~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sg-tr~~SgS~D~~lkiWs~~~~~~-~~-------~E~-------~- 233 (423)
T KOG0313|consen 171 LRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSG-TRFCSGSWDTMLKIWSVETDEE-DE-------LES-------S- 233 (423)
T ss_pred EEEEEecCchhhhhHHhHhcccccceeEEEecCCC-CeEEeecccceeeecccCCCcc-cc-------ccc-------c-
Confidence 9999998775 35788899999999975 8999999999999999333210 00 000 0
Q ss_pred CchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCC
Q psy12356 166 ESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYL 245 (400)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~ 245 (400)
.+++ .+. ..+...... + .....+.||+.+|.+|.|++.+....++.|.
T Consensus 234 ----------s~~r-------rk~----~~~~~~~~~---r--------~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDH 281 (423)
T KOG0313|consen 234 ----------SNRR-------RKK----QKREKEGGT---R--------TPLVTLEGHTEPVSSVVWSDATVIYSVSWDH 281 (423)
T ss_pred ----------chhh-------hhh----hhhhhcccc---c--------CceEEecccccceeeEEEcCCCceEeecccc
Confidence 0000 000 000000000 0 0112257999999999999955555557899
Q ss_pred eEEEEeCCCCCCceeeecCC------CcCCCCcc-cCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCC
Q psy12356 246 CVKVWDLHMESRPVETYPTH------TKEENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSD 318 (400)
Q Consensus 246 tIklWD~~~~~~~l~~~~~h------~~~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~d 318 (400)
|||.||+.+++. ..++.+- .+++..++ ++++.+..+|||+.-.. ++.+.+-+|
T Consensus 282 TIk~WDletg~~-~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~----------------~gs~v~~s~--- 341 (423)
T KOG0313|consen 282 TIKVWDLETGGL-KSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTG----------------DGSVVSQSL--- 341 (423)
T ss_pred eEEEEEeecccc-eeeeecCcceeEeecccccceeeecCCCCceeecCCCCC----------------CCceeEEee---
Confidence 999999999863 3333221 23444444 35677888888875211 122223222
Q ss_pred CcEEeecccchhhcccccceeEEEEccCCCE-EEEe-cCCeEEEEeCccCC
Q psy12356 319 QLTVEASPRGIFADAHTYHISSTSVNSDQET-YLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 319 g~~~~~~~~~~~~~gh~~~V~~i~fspDg~~-las~-~D~~i~lW~~~~~~ 367 (400)
.||.+=|.++.+||...+ |+|+ .|+++++||+.++.
T Consensus 342 -------------~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k 379 (423)
T KOG0313|consen 342 -------------IGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK 379 (423)
T ss_pred -------------ecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC
Confidence 389999999999999875 5666 69999999998766
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-23 Score=187.04 Aligned_cols=211 Identities=18% Similarity=0.214 Sum_probs=156.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
++|..|.|.+||+.|+||+.|++|+.||.++++ ..+.+++|+. .|+++.-+.-++
T Consensus 91 gAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~-----------~~rk~k~h~~------------~vNs~~p~rrg~-- 145 (338)
T KOG0265|consen 91 GAVMELHGMRDGSHILSCGTDKTVRGWDAETGK-----------RIRKHKGHTS------------FVNSLDPSRRGP-- 145 (338)
T ss_pred ceeEeeeeccCCCEEEEecCCceEEEEecccce-----------eeehhccccc------------eeeecCccccCC--
Confidence 689999999999999999999999999998753 4567888873 478777333332
Q ss_pred eEE-EeeCCCeEEEEEccCCCc-ccc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc--c
Q psy12356 84 HFL-LSTNDQSFNIVDIKPTNM-EEL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN--C 157 (400)
Q Consensus 84 ~~l-~ss~D~tI~lWd~~~~~~-~~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~--~ 157 (400)
.++ +++.|+|+||||+++... +.. .-.++++.|...+ ..+.+|+.|+.||+||+|.+.. .+.+.+ .
T Consensus 146 ~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s-~qv~sggIdn~ikvWd~r~~d~-------~~~lsGh~D 217 (338)
T KOG0265|consen 146 QLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTS-DQVISGGIDNDIKVWDLRKNDG-------LYTLSGHAD 217 (338)
T ss_pred eEEEecCCCceEEEEeecccchhhccccceeEEEEEecccc-cceeeccccCceeeeccccCcc-------eEEeecccC
Confidence 444 467899999999987652 333 3468999999875 5689999999999999998842 222221 1
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
.+.++.. ++.+..+.+.+.|+++++||+|......+.++.|+++.+... .-...++|||+++
T Consensus 218 tIt~lsl----------s~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfe--------knlL~cswsp~~~ 279 (338)
T KOG0265|consen 218 TITGLSL----------SRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFE--------KNLLKCSWSPNGT 279 (338)
T ss_pred ceeeEEe----------ccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhh--------hhcceeeccCCCC
Confidence 2222222 345555566678999999999988766665677766543211 1246799999999
Q ss_pred EEEE-ecCCeEEEEeCCCCCCceeeecCCC
Q psy12356 238 YMIS-RDYLCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 238 ~las-~~D~tIklWD~~~~~~~l~~~~~h~ 266 (400)
.+.+ +.|+.+.+||.... ..+..++||.
T Consensus 280 ~i~ags~dr~vyvwd~~~r-~~lyklpGh~ 308 (338)
T KOG0265|consen 280 KITAGSADRFVYVWDTTSR-RILYKLPGHY 308 (338)
T ss_pred ccccccccceEEEeecccc-cEEEEcCCcc
Confidence 9976 57999999999975 4677888885
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-23 Score=207.72 Aligned_cols=262 Identities=15% Similarity=0.199 Sum_probs=186.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..+.+..|. +.++++++.|.+|++||..++ +.++..+.||+ +.|..+++.. + +.
T Consensus 209 ~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~----------~~i~~~l~GH~------------g~V~~l~~~~-~-~~ 262 (537)
T KOG0274|consen 209 HVVLCLQLH--DGFFKSGSDDSTLHLWDLNNG----------YLILTRLVGHF------------GGVWGLAFPS-G-GD 262 (537)
T ss_pred chhhhheee--cCeEEecCCCceeEEeecccc----------eEEEeeccCCC------------CCceeEEEec-C-CC
Confidence 456677777 558999999999999998753 23344589998 4589999864 2 34
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccc---ccceeccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR---HSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~---~~~~~~~~~~ 156 (400)
.+++++.|.|+|+||..+|++ .+|...|.++...+ ..+++||.|.+||+|++.++..+.. |...+..
T Consensus 263 ~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~---~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~--- 336 (537)
T KOG0274|consen 263 KLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP---FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNC--- 336 (537)
T ss_pred EEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC---ceEeeccCCceEEEEeccCcceEEEeccccccEEE---
Confidence 777889999999999999984 56788888888765 4688899999999999998843321 1111110
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
+. -+...+.+++.|++|++||++++++.. .+.+|+.+|.++.+.+.
T Consensus 337 ---------------v~--~~~~~lvsgs~d~~v~VW~~~~~~cl~----------------sl~gH~~~V~sl~~~~~- 382 (537)
T KOG0274|consen 337 ---------------VQ--LDEPLLVSGSYDGTVKVWDPRTGKCLK----------------SLSGHTGRVYSLIVDSE- 382 (537)
T ss_pred ---------------EE--ecCCEEEEEecCceEEEEEhhhceeee----------------eecCCcceEEEEEecCc-
Confidence 01 123446667789999999999776531 14589999999999777
Q ss_pred cEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCC-----CCcc-cCCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 237 RYMISR-DYLCVKVWDLHMESRPVETYPTHTKEE-----NGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 237 ~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~-----~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
..++++ -|++||+||+++...|++++.+|.... .+++ ++.+.+++|++|+.... +++++
T Consensus 383 ~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~~~~~Lvs~~aD~~Ik~WD~~~~------~~~~~-------- 448 (537)
T KOG0274|consen 383 NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLLRDNFLVSSSADGTIKLWDAEEG------ECLRT-------- 448 (537)
T ss_pred ceEEeeeeccceEeecCCchhhhhhhhcCCcccccccccccceeEeccccccEEEeecccC------ceeee--------
Confidence 677764 699999999998745899999996332 2333 45677788888865322 11111
Q ss_pred eEEEEEcCCCcEEeecccchhhcc-cccceeEEEEccCCCEEEEecCCeEEEEeCccCC
Q psy12356 310 INSISVNSDQLTVEASPRGIFADA-HTYHISSTSVNSDQETYLSADDLRINLWHLEITD 367 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~~~~~~~g-h~~~V~~i~fspDg~~las~~D~~i~lW~~~~~~ 367 (400)
+ .+ |...|..+++. +-..|+++.|+++++||+....
T Consensus 449 --------------------~-~~~~~~~v~~l~~~-~~~il~s~~~~~~~l~dl~~~~ 485 (537)
T KOG0274|consen 449 --------------------L-EGRHVGGVSALALG-KEEILCSSDDGSVKLWDLRSGT 485 (537)
T ss_pred --------------------e-ccCCcccEEEeecC-cceEEEEecCCeeEEEecccCc
Confidence 1 13 56677777777 4444555689999999998644
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-22 Score=189.27 Aligned_cols=261 Identities=14% Similarity=0.251 Sum_probs=193.9
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|.++...|....++||+.|..+.++|... .+++.+|.||+ .+|+++.|+|+.. .+
T Consensus 222 i~ald~~~s~~~ilTGG~d~~av~~d~~s-----------~q~l~~~~Gh~------------kki~~v~~~~~~~--~v 276 (506)
T KOG0289|consen 222 ITALDIIPSSSKILTGGEDKTAVLFDKPS-----------NQILATLKGHT------------KKITSVKFHKDLD--TV 276 (506)
T ss_pred eeEEeecCCCCcceecCCCCceEEEecch-----------hhhhhhccCcc------------eEEEEEEeccchh--he
Confidence 45666777778999999999999999874 34678999998 4699999999863 67
Q ss_pred EEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 86 LLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
++++.|..||||...... .+.|.+.|+.+..||.| .+|+++|.|+++-.-|.+++.++..+... ...+...
T Consensus 277 ~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tg-eYllsAs~d~~w~Fsd~~~g~~lt~vs~~---~s~v~~t- 351 (506)
T KOG0289|consen 277 ITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTG-EYLLSASNDGTWAFSDISSGSQLTVVSDE---TSDVEYT- 351 (506)
T ss_pred eecCCcceEEeeccccccCccccccccccceeeeeccCC-cEEEEecCCceEEEEEccCCcEEEEEeec---cccceeE-
Confidence 788999999999986554 35678899999999985 79999999999999999999654322110 0001111
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las 241 (400)
...+.|++...++|..||.+++||+...... ..|.+|+++|..|+|+.+|.+||+
T Consensus 352 ---------s~~fHpDgLifgtgt~d~~vkiwdlks~~~~----------------a~Fpght~~vk~i~FsENGY~Lat 406 (506)
T KOG0289|consen 352 ---------SAAFHPDGLIFGTGTPDGVVKIWDLKSQTNV----------------AKFPGHTGPVKAISFSENGYWLAT 406 (506)
T ss_pred ---------EeeEcCCceEEeccCCCceEEEEEcCCcccc----------------ccCCCCCCceeEEEeccCceEEEE
Confidence 1245689999999999999999999864321 124589999999999999999997
Q ss_pred -ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCc
Q psy12356 242 -RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQL 320 (400)
Q Consensus 242 -~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~ 320 (400)
++|+.|++||+|... ..++| .+. .-+.+++++|-+.|+
T Consensus 407 ~add~~V~lwDLRKl~-n~kt~--------------------~l~--------------------~~~~v~s~~fD~SGt 445 (506)
T KOG0289|consen 407 AADDGSVKLWDLRKLK-NFKTI--------------------QLD--------------------EKKEVNSLSFDQSGT 445 (506)
T ss_pred EecCCeEEEEEehhhc-cccee--------------------ecc--------------------ccccceeEEEcCCCC
Confidence 578889999999542 22332 111 111356677777777
Q ss_pred EEeecccc-----------hh-----hcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 321 TVEASPRG-----------IF-----ADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 321 ~~~~~~~~-----------~~-----~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
+|...+.. .| ..-|++..+.+.|..+-++++++ .|...|+..
T Consensus 446 ~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a 504 (506)
T KOG0289|consen 446 YLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYA 504 (506)
T ss_pred eEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEee
Confidence 76543321 12 13688899999999999999996 588877764
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=180.00 Aligned_cols=253 Identities=13% Similarity=0.145 Sum_probs=173.0
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.-|.+|+|+.||..||+|+.|++++||+++..+. ..--..++|+.. |..++|.|.++
T Consensus 20 ~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~---------~~~~~~~gh~~s------------vdql~w~~~~~- 77 (313)
T KOG1407|consen 20 VQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRF---------RKELVYRGHTDS------------VDQLCWDPKHP- 77 (313)
T ss_pred hhcceEEEEcccCceeeecccCCceEEEEecchhh---------hhhhcccCCCcc------------hhhheeCCCCC-
Confidence 45689999999999999999999999999985421 111144677743 77889999765
Q ss_pred ceEEEeeCCCeEEEEEccCCCcc-c---ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNME-E---LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~-~---~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
..+++++.|++|++||++.+++. . -.+.+ -+.|+|+| ++++.++.|..|...|.|+.+....... ....+..
T Consensus 78 d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni-~i~wsp~g-~~~~~~~kdD~it~id~r~~~~~~~~~~--~~e~ne~ 153 (313)
T KOG1407|consen 78 DLFATASGDKTIRIWDIRSGKCTARIETKGENI-NITWSPDG-EYIAVGNKDDRITFIDARTYKIVNEEQF--KFEVNEI 153 (313)
T ss_pred cceEEecCCceEEEEEeccCcEEEEeeccCcce-EEEEcCCC-CEEEEecCcccEEEEEecccceeehhcc--cceeeee
Confidence 47888899999999999988742 1 12233 56899986 7889999999999999998754332110 0000111
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
.|+ .++.....+. .-|.|.|-..- ..+.. ..+..|.....+|+|+|+|++
T Consensus 154 ~w~-------------~~nd~Fflt~-GlG~v~ILsyp---------------sLkpv-~si~AH~snCicI~f~p~Gry 203 (313)
T KOG1407|consen 154 SWN-------------NSNDLFFLTN-GLGCVEILSYP---------------SLKPV-QSIKAHPSNCICIEFDPDGRY 203 (313)
T ss_pred eec-------------CCCCEEEEec-CCceEEEEecc---------------ccccc-cccccCCcceEEEEECCCCce
Confidence 111 0111111111 13555553222 11101 126689888889999999999
Q ss_pred EEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcC
Q psy12356 239 MISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNS 317 (400)
Q Consensus 239 las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~ 317 (400)
+|++ .|..+-|||+..- .|++.|. -+++.|..++||.
T Consensus 204 fA~GsADAlvSLWD~~EL-iC~R~is-----------------------------------------RldwpVRTlSFS~ 241 (313)
T KOG1407|consen 204 FATGSADALVSLWDVDEL-ICERCIS-----------------------------------------RLDWPVRTLSFSH 241 (313)
T ss_pred EeeccccceeeccChhHh-hhheeec-----------------------------------------cccCceEEEEecc
Confidence 9975 6999999999864 3555442 2566788899999
Q ss_pred CCcEEeecccc-------------hhhcccccceeEEEEccCCCEEEEe
Q psy12356 318 DQLTVEASPRG-------------IFADAHTYHISSTSVNSDQETYLSA 353 (400)
Q Consensus 318 dg~~~~~~~~~-------------~~~~gh~~~V~~i~fspDg~~las~ 353 (400)
||++||+++.. .++.-|.++.++|+|+|...+||=+
T Consensus 242 dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA 290 (313)
T KOG1407|consen 242 DGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYA 290 (313)
T ss_pred CcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEE
Confidence 99998876543 2233567888999999999999854
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-22 Score=199.14 Aligned_cols=232 Identities=14% Similarity=0.199 Sum_probs=173.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeec-cCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.|++|.|+++|++||.|-.+|.|+|||..+.. .++.+.+ |. ..|-+++|+.
T Consensus 218 ~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k-----------~~~~~~~~h~------------~rvg~laW~~---- 270 (484)
T KOG0305|consen 218 ELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQK-----------KTRTLRGSHA------------SRVGSLAWNS---- 270 (484)
T ss_pred CceEEEEECCCCCEEEEeecCCeEEEEehhhcc-----------ccccccCCcC------------ceeEEEeccC----
Confidence 568999999999999999999999999987642 2345666 65 4599999983
Q ss_pred ceEEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc---cccceeccC
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD---RHSKCLIEG 154 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~---~~~~~~~~~ 154 (400)
..+.+++.|+.|..+|++..+ +..|...|..++|++++ +++|+|+.|+.+.|||........ .|...++.+
T Consensus 271 ~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~-~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~ 349 (484)
T KOG0305|consen 271 SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDG-NQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKAL 349 (484)
T ss_pred ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCC-CeeccCCCccceEeccCCCccccEEEeccceeeeEe
Confidence 145567899999999998765 45688899999999985 899999999999999996553322 122222111
Q ss_pred cccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 155 TNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
. +. ...+..+|++.|+.|+.|++||+.+++..+. . .-...|.+|.|+|
T Consensus 350 a--------wc-------P~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~---------------v--dtgsQVcsL~Wsk 397 (484)
T KOG0305|consen 350 A--------WC-------PWQSGLLATGGGSADRCIKFWNTNTGARIDS---------------V--DTGSQVCSLIWSK 397 (484)
T ss_pred e--------eC-------CCccCceEEcCCCcccEEEEEEcCCCcEecc---------------c--ccCCceeeEEEcC
Confidence 1 11 0113457788899999999999998765421 0 1125699999999
Q ss_pred CCcEEEEe---cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 235 SGRYMISR---DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 235 dg~~las~---~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
..+-|+++ .++.|.||+.-+- .++..+
T Consensus 398 ~~kEi~sthG~s~n~i~lw~~ps~-~~~~~l------------------------------------------------- 427 (484)
T KOG0305|consen 398 KYKELLSTHGYSENQITLWKYPSM-KLVAEL------------------------------------------------- 427 (484)
T ss_pred CCCEEEEecCCCCCcEEEEecccc-ceeeee-------------------------------------------------
Confidence 98766643 3678999988652 111111
Q ss_pred EEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 312 SISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
.||+..|..+++||||+.++++ .|.|+|+|++-.
T Consensus 428 --------------------~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 428 --------------------LGHTSRVLYLALSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred --------------------cCCcceeEEEEECCCCCEEEEecccCcEEeccccC
Confidence 3678888899999999999997 699999999864
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-22 Score=181.28 Aligned_cols=280 Identities=13% Similarity=0.125 Sum_probs=173.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++||.||++|||++.|++|+||++.+... +.|. +++..-.-+..+.|+|.||-.
T Consensus 87 ~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~---------------~eHr----~~R~nve~dhpT~V~FapDc~-- 145 (420)
T KOG2096|consen 87 KEVTDVAFSSDGKKLATISGDRSIRLWDVRDFEN---------------KEHR----CIRQNVEYDHPTRVVFAPDCK-- 145 (420)
T ss_pred CceeeeEEcCCCceeEEEeCCceEEEEecchhhh---------------hhhh----HhhccccCCCceEEEECCCcc--
Confidence 5799999999999999999999999999986421 1221 111000001257899999853
Q ss_pred eEEE-eeCCCeEEEEEccCCC---cc-------------cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccc
Q psy12356 84 HFLL-STNDQSFNIVDIKPTN---ME-------------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146 (400)
Q Consensus 84 ~~l~-ss~D~tI~lWd~~~~~---~~-------------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~ 146 (400)
.+++ ..+..+++++.+.+.+ .. .|...|-++.... +..+|+|++.|.+|-|||++.. ++.
T Consensus 146 s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lkGq-~L~- 222 (420)
T KOG2096|consen 146 SVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLKGQ-LLQ- 222 (420)
T ss_pred eEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecCCc-eee-
Confidence 3444 4567789999875432 10 1223344555555 3579999999999999999944 221
Q ss_pred ccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccccccc--CcccccccCCCCCCCcccccccc
Q psy12356 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALC--DRHSKFFEEPEDPTNKSFFSEII 224 (400)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~h~ 224 (400)
++.+- .. ......-+|+++.++..+.-..+++|.+-=++.. ....+.|+ +.||.
T Consensus 223 ---~idtn---q~--------~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~----------LkGH~ 278 (420)
T KOG2096|consen 223 ---SIDTN---QS--------SNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFS----------LKGHQ 278 (420)
T ss_pred ---eeccc---cc--------cccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhhe----------eccch
Confidence 11110 00 1122233578877776667788999986422210 11111221 56999
Q ss_pred cCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceec
Q psy12356 225 SSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFA 303 (400)
Q Consensus 225 ~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~ 303 (400)
..|.+.+|||+.+.+++ +-||++||||+.-. |+.-+.. ..+|. +.-......+
T Consensus 279 saV~~~aFsn~S~r~vtvSkDG~wriwdtdVr------Y~~~qDp-----------k~Lk~--g~~pl~aag~------- 332 (420)
T KOG2096|consen 279 SAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVR------YEAGQDP-----------KILKE--GSAPLHAAGS------- 332 (420)
T ss_pred hheeeeeeCCCcceeEEEecCCcEEEeeccce------EecCCCc-----------hHhhc--CCcchhhcCC-------
Confidence 99999999999999997 57999999998743 1111100 00100 0000000000
Q ss_pred cccccceEEEEEcCCCcEEeecc-----------cc---hhhcccccceeEEEEccCCCEEEEecCCeEEEEe
Q psy12356 304 NAHTYHINSISVNSDQLTVEASP-----------RG---IFADAHTYHISSTSVNSDQETYLSADDLRINLWH 362 (400)
Q Consensus 304 ~~~~~~i~~i~~s~dg~~~~~~~-----------~~---~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~ 362 (400)
..+ -++++|.|+.||.+. .+ .+...|+..|.+|+|+|||+++||++|.-+|+..
T Consensus 333 ----~p~-RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGdr~vrv~~ 400 (420)
T KOG2096|consen 333 ----EPV-RLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGDRYVRVIR 400 (420)
T ss_pred ----Cce-EEEeCCCCcEEEeecCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecceeeeeec
Confidence 011 355666666655322 11 1235799999999999999999999999998876
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-23 Score=196.62 Aligned_cols=264 Identities=18% Similarity=0.242 Sum_probs=182.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|..|.|-++...||+|+.|..|++|++...+ .....++.|-. +.|+++.|-+++.
T Consensus 176 gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k---------~~~~~tLaGs~------------g~it~~d~d~~~~-- 232 (459)
T KOG0288|consen 176 GEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK---------SELISTLAGSL------------GNITSIDFDSDNK-- 232 (459)
T ss_pred cccceeEEccCcchhhhcchhhhhhhhhcccch---------hhhhhhhhccC------------CCcceeeecCCCc--
Confidence 578999999999999999999999999987532 22334554433 3488999987653
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc-cc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN-CN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~-~~ 158 (400)
+++++++|+.+++|++...+ +.+|++.|+++.|.-.. ..+++++.|.+||+||+... .|..+.-. ..
T Consensus 233 ~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~-~~vVsgs~DRtiK~WDl~k~-------~C~kt~l~~S~ 304 (459)
T KOG0288|consen 233 HVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSH-SRVVSGSADRTIKLWDLQKA-------YCSKTVLPGSQ 304 (459)
T ss_pred eEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccc-cceeeccccchhhhhhhhhh-------heecccccccc
Confidence 78889999999999998876 46788999999998764 45899999999999999987 33332210 01
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
+..+.. ......+|-.|++||+||+|..... .. +..+ +.|++|..+++|..
T Consensus 305 cnDI~~------------~~~~~~SgH~DkkvRfwD~Rs~~~~------~s----------v~~g-g~vtSl~ls~~g~~ 355 (459)
T KOG0288|consen 305 CNDIVC------------SISDVISGHFDKKVRFWDIRSADKT------RS----------VPLG-GRVTSLDLSMDGLE 355 (459)
T ss_pred ccceEe------------cceeeeecccccceEEEeccCCcee------eE----------eecC-cceeeEeeccCCeE
Confidence 111111 0122345668999999999976431 11 1122 58999999999998
Q ss_pred EEE-ecCCeEEEEeCCCCCCceeeecCC-----------CcCCCCccc-CCCCCceeecCcccccceeeccCccceeccc
Q psy12356 239 MIS-RDYLCVKVWDLHMESRPVETYPTH-----------TKEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANA 305 (400)
Q Consensus 239 las-~~D~tIklWD~~~~~~~l~~~~~h-----------~~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~ 305 (400)
|.+ +-|.++++.|+++.. -.+.|.+- .++|++.|+ ++|.++++.+|++... .+.+.
T Consensus 356 lLsssRDdtl~viDlRt~e-I~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tg------KlE~~---- 424 (459)
T KOG0288|consen 356 LLSSSRDDTLKVIDLRTKE-IRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTG------KLEKV---- 424 (459)
T ss_pred EeeecCCCceeeeeccccc-EEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCc------eEEEE----
Confidence 876 569999999999854 23444332 145666654 3555566666654211 11111
Q ss_pred cccceEEEEEcCCCcEEeecccchhhccccc-ceeEEEEccCCCEEEEec-CCeEEEEe
Q psy12356 306 HTYHINSISVNSDQLTVEASPRGIFADAHTY-HISSTSVNSDQETYLSAD-DLRINLWH 362 (400)
Q Consensus 306 ~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~-~V~~i~fspDg~~las~~-D~~i~lW~ 362 (400)
....+.+ .|++++|+|-|..|++++ ++.+.+|.
T Consensus 425 ------------------------l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 425 ------------------------LSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred ------------------------eccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 1112333 799999999999999985 88899994
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=186.54 Aligned_cols=207 Identities=14% Similarity=0.155 Sum_probs=143.8
Q ss_pred eeEEEEEE-CC--CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 4 YMREASQR-FS--DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 4 ~~v~~v~f-sp--dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
+.|.++++ .+ ...+++++|.|.++++|..+.+.. ..+..+.-+||.+ .|.+|+-.+++
T Consensus 145 ~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~-------~~~~~~~~~GHk~------------~V~sVsv~~sg 205 (423)
T KOG0313|consen 145 GPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGEN-------KVKALKVCRGHKR------------SVDSVSVDSSG 205 (423)
T ss_pred cceeeeEEEecCCccceEEEecCCceEEEEEecCchh-------hhhHHhHhccccc------------ceeEEEecCCC
Confidence 45665665 23 334799999999999999886531 1122333458874 48899988877
Q ss_pred CCceEEEeeCCCeEEEEEccCCC-----------------------------cccccccEEEEEEecCCCCEEEEEeCCC
Q psy12356 81 NQAHFLLSTNDQSFNIVDIKPTN-----------------------------MEELNEVITAAEFHPIDCNLFVYSSSKG 131 (400)
Q Consensus 81 ~~~~~l~ss~D~tI~lWd~~~~~-----------------------------~~~~~~~V~sv~f~p~~~~~las~s~Dg 131 (400)
. +++++|.|.+++||+..... +.+|++.|.+|.|.+. ..+.|+|-|.
T Consensus 206 t--r~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~--~v~yS~SwDH 281 (423)
T KOG0313|consen 206 T--RFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDA--TVIYSVSWDH 281 (423)
T ss_pred C--eEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCC--CceEeecccc
Confidence 5 88999999999999932100 1346778999999983 5788999999
Q ss_pred eEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCC
Q psy12356 132 TIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEP 211 (400)
Q Consensus 132 ~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~ 211 (400)
+||.||+.++....+ +..... + ..+.-.+....+++|+.|..|||||.|++... -
T Consensus 282 TIk~WDletg~~~~~-------~~~~ks----l-----~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs-~-------- 336 (423)
T KOG0313|consen 282 TIKVWDLETGGLKST-------LTTNKS----L-----NCISYSPLSKLLASGSSDRHIRLWDPRTGDGS-V-------- 336 (423)
T ss_pred eEEEEEeecccceee-------eecCcc----e-----eEeecccccceeeecCCCCceeecCCCCCCCc-e--------
Confidence 999999999954221 110000 0 01111244455677889999999999986421 0
Q ss_pred CCCCCcccccccccCeEEEEECCCCcE-EEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 212 EDPTNKSFFSEIISSISDVKISNSGRY-MISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 212 ~~~~~~~~~~~h~~~V~~v~fSpdg~~-las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
..+.+.+|.++|.+|.|||...+ ++|+ -|+++|+||++....||..+
T Consensus 337 ----v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI 385 (423)
T KOG0313|consen 337 ----VSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI 385 (423)
T ss_pred ----eEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceee
Confidence 11225699999999999997765 4564 59999999999865566544
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=195.84 Aligned_cols=234 Identities=17% Similarity=0.266 Sum_probs=174.2
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+|.+|.|+|---.+.++-.+|.|.|||.+++. +.+.|.-.+ ..|.+..|-+..+ =
T Consensus 15 RVKsVd~HPtePw~la~LynG~V~IWnyetqt-----------mVksfeV~~------------~PvRa~kfiaRkn--W 69 (794)
T KOG0276|consen 15 RVKSVDFHPTEPWILAALYNGDVQIWNYETQT-----------MVKSFEVSE------------VPVRAAKFIARKN--W 69 (794)
T ss_pred ceeeeecCCCCceEEEeeecCeeEEEecccce-----------eeeeeeecc------------cchhhheeeeccc--e
Confidence 68999999988888888899999999998642 345565433 2366777876543 6
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc--
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN-- 158 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~-- 158 (400)
++++++|+.||+++..+++ +..|...|++++.||.. -+++|+|.|-+||+||.+.+- .|.++..++.
T Consensus 70 iv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~-P~vLtsSDDm~iKlW~we~~w------a~~qtfeGH~Hy 142 (794)
T KOG0276|consen 70 IVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTL-PYVLTSSDDMTIKLWDWENEW------ACEQTFEGHEHY 142 (794)
T ss_pred EEEecCCceEEEEecccceeeEEeeccccceeeeeecCCC-CeEEecCCccEEEEeeccCce------eeeeEEcCcceE
Confidence 7789999999999999886 45688899999999986 478999999999999998873 3333333221
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC--
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG-- 236 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg-- 236 (400)
+..+.+.+ .+....++++-|++|++|.+.+... ..+ +.+|...|++|.|=|-|
T Consensus 143 VMqv~fnP---------kD~ntFaS~sLDrTVKVWslgs~~~----nfT------------l~gHekGVN~Vdyy~~gdk 197 (794)
T KOG0276|consen 143 VMQVAFNP---------KDPNTFASASLDRTVKVWSLGSPHP----NFT------------LEGHEKGVNCVDYYTGGDK 197 (794)
T ss_pred EEEEEecC---------CCccceeeeeccccEEEEEcCCCCC----cee------------eeccccCcceEEeccCCCc
Confidence 22333321 1223345667899999999875321 111 45888999999998755
Q ss_pred cEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEE
Q psy12356 237 RYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISV 315 (400)
Q Consensus 237 ~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 315 (400)
.+|+|+ +|.+|||||.++. .|+++++|
T Consensus 198 pylIsgaDD~tiKvWDyQtk-~CV~TLeG--------------------------------------------------- 225 (794)
T KOG0276|consen 198 PYLISGADDLTIKVWDYQTK-SCVQTLEG--------------------------------------------------- 225 (794)
T ss_pred ceEEecCCCceEEEeecchH-HHHHHhhc---------------------------------------------------
Confidence 488875 7899999999985 46666544
Q ss_pred cCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 316 NSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 316 s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
|+..|+.+.|+|.=.+++|+ .|+|+|||+-.+
T Consensus 226 ------------------Ht~Nvs~v~fhp~lpiiisgsEDGTvriWhs~T 258 (794)
T KOG0276|consen 226 ------------------HTNNVSFVFFHPELPIIISGSEDGTVRIWNSKT 258 (794)
T ss_pred ------------------ccccceEEEecCCCcEEEEecCCccEEEecCcc
Confidence 44556778888999999997 699999998765
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-22 Score=213.21 Aligned_cols=236 Identities=12% Similarity=0.122 Sum_probs=160.6
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCC----Cc-------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPT----NM-------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCD 137 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~----~~-------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD 137 (400)
..|.+++|+|+++ .+++++.|++|+|||+... .. ......|.+++|+|..+.+||+++.||+|++||
T Consensus 484 ~~V~~i~fs~dg~--~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd 561 (793)
T PLN00181 484 NLVCAIGFDRDGE--FFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWD 561 (793)
T ss_pred CcEEEEEECCCCC--EEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEE
Confidence 5699999999874 6778899999999997542 10 011346889999987678999999999999999
Q ss_pred cccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCc
Q psy12356 138 MRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNK 217 (400)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 217 (400)
+.++........+ ...++.+.++ .+++...++++.||+|++||++++... ..+
T Consensus 562 ~~~~~~~~~~~~H-----~~~V~~l~~~---------p~~~~~L~Sgs~Dg~v~iWd~~~~~~~----~~~--------- 614 (793)
T PLN00181 562 VARSQLVTEMKEH-----EKRVWSIDYS---------SADPTLLASGSDDGSVKLWSINQGVSI----GTI--------- 614 (793)
T ss_pred CCCCeEEEEecCC-----CCCEEEEEEc---------CCCCCEEEEEcCCCEEEEEECCCCcEE----EEE---------
Confidence 9887432211111 0112223222 124445667778999999999875432 111
Q ss_pred ccccccccCeEEEEEC-CCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcC------CCCc-ccCCCCCceeecCccc
Q psy12356 218 SFFSEIISSISDVKIS-NSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKE------ENGQ-LRDPSNITALRVPQIK 288 (400)
Q Consensus 218 ~~~~~h~~~V~~v~fS-pdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~------~~g~-~~~~~~~~~i~l~~~~ 288 (400)
.. ...|.++.|+ ++|++|+++ .|++|++||+++...++..+.+|... .++. +++++.++++++|++.
T Consensus 615 ---~~-~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~ 690 (793)
T PLN00181 615 ---KT-KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLS 690 (793)
T ss_pred ---ec-CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCC
Confidence 12 2468899995 579999875 69999999999865567778888521 2333 3456777888888753
Q ss_pred ccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccC
Q psy12356 289 PIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEIT 366 (400)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~ 366 (400)
.... ......+. .+ .||...++.++|+|+|++||++ .|++|++|+...+
T Consensus 691 ~~~~-----------~~~~~~l~-----------------~~-~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~ 740 (793)
T PLN00181 691 MSIS-----------GINETPLH-----------------SF-MGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFP 740 (793)
T ss_pred CCcc-----------ccCCcceE-----------------EE-cCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCC
Confidence 2100 00000000 11 4899999999999999999997 6999999997653
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-22 Score=196.75 Aligned_cols=213 Identities=16% Similarity=0.230 Sum_probs=154.9
Q ss_pred EEEEC-CCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE
Q psy12356 8 ASQRF-SDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL 86 (400)
Q Consensus 8 ~v~fs-pdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l 86 (400)
++..+ |.+++|.||+.||.|++|+........ +...+.+++.|+ .+|+.+...-+++ .++
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~-----s~~~~asme~Hs------------DWVNDiiL~~~~~--tlI 89 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEP-----STPYIASMEHHS------------DWVNDIILCGNGK--TLI 89 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCc-----ccchhhhhhhhH------------hHHhhHHhhcCCC--ceE
Confidence 55565 467789999999999999987543110 111245677776 5788777765543 788
Q ss_pred EeeCCCeEEEEEccCCC------cccccccEEEEEE-ecCCCCEEEEEeCCCeEEEEeccccc--ccccccceeccCccc
Q psy12356 87 LSTNDQSFNIVDIKPTN------MEELNEVITAAEF-HPIDCNLFVYSSSKGTIRLCDMRAAA--LCDRHSKCLIEGTNC 157 (400)
Q Consensus 87 ~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f-~p~~~~~las~s~Dg~i~lWD~~~~~--~~~~~~~~~~~~~~~ 157 (400)
++|.|.||++|+...+. +..|...|.+++. .++ ..++||||.|+.|.|||+.++. ++..++
T Consensus 90 S~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~-~~lvaSgGLD~~IflWDin~~~~~l~~s~n--------- 159 (735)
T KOG0308|consen 90 SASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKN-NELVASGGLDRKIFLWDINTGTATLVASFN--------- 159 (735)
T ss_pred EecCCceEEEeecccCcchhHhhhhcccchheeeeecccC-ceeEEecCCCccEEEEEccCcchhhhhhcc---------
Confidence 89999999999997663 3678899999999 665 5789999999999999999872 222111
Q ss_pred ceeceeccCchhhhhhc---ccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 158 NCQGLIVPESKREERQS---SQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
+........++++.+++ .+.+...++|+..+.+|+||-|+.+... .+.||+.-|..+..++
T Consensus 160 ~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kim----------------kLrGHTdNVr~ll~~d 223 (735)
T KOG0308|consen 160 NVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIM----------------KLRGHTDNVRVLLVND 223 (735)
T ss_pred ccccccCCCCCccceeeeecCCcceEEEecCcccceEEecccccccee----------------eeeccccceEEEEEcC
Confidence 11111111134455544 3455677888899999999999764321 1458999999999999
Q ss_pred CCcEEEE-ecCCeEEEEeCCCCCCceeeecCCC
Q psy12356 235 SGRYMIS-RDYLCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 235 dg~~las-~~D~tIklWD~~~~~~~l~~~~~h~ 266 (400)
||+.++| ++|+||||||+... +|+.+|..|.
T Consensus 224 DGt~~ls~sSDgtIrlWdLgqQ-rCl~T~~vH~ 255 (735)
T KOG0308|consen 224 DGTRLLSASSDGTIRLWDLGQQ-RCLATYIVHK 255 (735)
T ss_pred CCCeEeecCCCceEEeeecccc-ceeeeEEecc
Confidence 9999987 57999999999964 5888886663
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.2e-21 Score=190.46 Aligned_cols=262 Identities=19% Similarity=0.246 Sum_probs=192.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|++++||.|...|+||+ .++|+||+..+. ++++++..- -+.+..|.|.+ ..
T Consensus 375 dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~-----------kciRTi~~~--------------y~l~~~Fvpgd--~~ 426 (888)
T KOG0306|consen 375 DVRSLCVSSDSILLASGA-GESIKIWNRDTL-----------KCIRTITCG--------------YILASKFVPGD--RY 426 (888)
T ss_pred heeEEEeecCceeeeecC-CCcEEEEEccCc-----------ceeEEeccc--------------cEEEEEecCCC--ce
Confidence 488999999999999987 668999999853 456666432 25677888854 36
Q ss_pred EEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
++++...|.+.|+|+....+ +.|.+.|++++..||+ ..++++|.|.+||+||..--.- +
T Consensus 427 Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~-~g~vT~saDktVkfWdf~l~~~-------~--------- 489 (888)
T KOG0306|consen 427 IVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDN-KGFVTGSADKTVKFWDFKLVVS-------V--------- 489 (888)
T ss_pred EEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCC-CceEEecCCcEEEEEeEEEEec-------c---------
Confidence 77788899999999988763 4578899999999985 6799999999999999654300 0
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
+ |+....+.|=.. +++ +-...|.++++||||++||
T Consensus 490 ----~------------------gt~~k~lsl~~~----------rtL-------------el~ddvL~v~~Spdgk~La 524 (888)
T KOG0306|consen 490 ----P------------------GTQKKVLSLKHT----------RTL-------------ELEDDVLCVSVSPDGKLLA 524 (888)
T ss_pred ----C------------------cccceeeeeccc----------eEE-------------eccccEEEEEEcCCCcEEE
Confidence 0 000111111100 111 2236799999999999999
Q ss_pred Ee-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 241 SR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 241 s~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
.+ =|+||+|+=+.+-.--+ .+=||. -++|++++ ..|.|.++|+|-+. .|.|.+.+. +|+..|.
T Consensus 525 VsLLdnTVkVyflDtlKFfl-sLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLd------FGDCHKS~f-AHdDSvm 596 (888)
T KOG0306|consen 525 VSLLDNTVKVYFLDTLKFFL-SLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLD------FGDCHKSFF-AHDDSVM 596 (888)
T ss_pred EEeccCeEEEEEecceeeee-eecccccceeEEeccCCcCeEEeccCCCceEEeccc------cchhhhhhh-cccCcee
Confidence 65 69999999888753223 233775 35788865 58899999999542 366776653 7999999
Q ss_pred EEEEcCCCcEEeeccc----chh----------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 312 SISVNSDQLTVEASPR----GIF----------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~----~~~----------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
++.|-|+...+=+.++ +.| ..||...|.+++.+|+|.+++|+ .|.+||+|...
T Consensus 597 ~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~t 664 (888)
T KOG0306|consen 597 SVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERT 664 (888)
T ss_pred EEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeecc
Confidence 9999997655443332 112 25999999999999999999997 69999999854
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-21 Score=193.99 Aligned_cols=173 Identities=11% Similarity=0.109 Sum_probs=125.7
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCcccc-CCCCcce-eeeeeeccCcchhhcccccccceeeEEEEEe-ccCC
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSI-PKRGEYN-VYSTFQSHEPEFDYLKSLEIEEKINKIRWLR-RKNQ 82 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~-~~~~~~~-~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp-~~~~ 82 (400)
|+...+++|+..+++++.+..+..|+..++....+ ...|... ....+.+|+ +.|.+++|+| ++
T Consensus 23 i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~------------~~V~~v~fsP~d~-- 88 (493)
T PTZ00421 23 VTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQE------------GPIIDVAFNPFDP-- 88 (493)
T ss_pred cccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCC------------CCEEEEEEcCCCC--
Confidence 45667889988888899899999998765321000 0000000 001355665 4599999999 44
Q ss_pred ceEEEeeCCCeEEEEEccCCC-----------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccccee
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN-----------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCL 151 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~-----------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~ 151 (400)
..+++++.|++|+|||+.++. +..|...|.+++|+|++.++|++++.|++|+|||++++.. +
T Consensus 89 ~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~-------~ 161 (493)
T PTZ00421 89 QKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKA-------V 161 (493)
T ss_pred CEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeE-------E
Confidence 367788999999999997642 2456778999999998667999999999999999987621 0
Q ss_pred ccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEE
Q psy12356 152 IEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVK 231 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 231 (400)
.. +.+|...|.+++
T Consensus 162 ------------------------------------------------------~~------------l~~h~~~V~sla 175 (493)
T PTZ00421 162 ------------------------------------------------------EV------------IKCHSDQITSLE 175 (493)
T ss_pred ------------------------------------------------------EE------------EcCCCCceEEEE
Confidence 00 124667899999
Q ss_pred ECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC
Q psy12356 232 ISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 232 fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~ 266 (400)
|+|+|++|+++ .|++|+|||++++. ++.++.+|.
T Consensus 176 ~spdG~lLatgs~Dg~IrIwD~rsg~-~v~tl~~H~ 210 (493)
T PTZ00421 176 WNLDGSLLCTTSKDKKLNIIDPRDGT-IVSSVEAHA 210 (493)
T ss_pred EECCCCEEEEecCCCEEEEEECCCCc-EEEEEecCC
Confidence 99999999975 69999999999864 566676663
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-22 Score=180.69 Aligned_cols=247 Identities=39% Similarity=0.592 Sum_probs=179.8
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|++|.|..-|.|||+|...|.|.+|..+... ..+++++..||+|+++++|+++++++++|+.|.|..+++..+
T Consensus 28 ~ItaVefd~tg~YlatGDkgGRVvlfer~~s~------~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~h 101 (460)
T COG5170 28 KITAVEFDETGLYLATGDKGGRVVLFEREKSY------GCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNH 101 (460)
T ss_pred eeeEEEeccccceEeecCCCceEEEeeccccc------ccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcce
Confidence 58899999999999999999999999987532 124667788999999999999999999999999998887789
Q ss_pred EEEeeCCCeEEEEEccCCCc----------------c---------------cc----------------cccEEEEEEe
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM----------------E---------------EL----------------NEVITAAEFH 117 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~----------------~---------------~~----------------~~~V~sv~f~ 117 (400)
+|++++|++|+||.+-...+ . .| .=.|++++|+
T Consensus 102 FLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~N 181 (460)
T COG5170 102 FLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFN 181 (460)
T ss_pred EEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeec
Confidence 99999999999999854310 0 01 0127899999
Q ss_pred cCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccC-cceeecCCCCCeEEEeecc
Q psy12356 118 PIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQN-RREKEDNRRKPAIRLCDMR 196 (400)
Q Consensus 118 p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~i~lWD~~ 196 (400)
.| .+.++| +.|-.|.||++.-.... ..+......++..+..- .....+.|. -....=.+..|.|+|-|+|
T Consensus 182 sD-~et~lS-aDdLrINLWnl~i~D~s----FnIVDiKP~nmeeLteV---ItSaeFhp~~cn~fmYSsSkG~Ikl~DlR 252 (460)
T COG5170 182 SD-KETLLS-ADDLRINLWNLEIIDGS----FNIVDIKPHNMEELTEV---ITSAEFHPEMCNVFMYSSSKGEIKLNDLR 252 (460)
T ss_pred Cc-hheeee-ccceeeeeccccccCCc----eEEEeccCccHHHHHHH---HhhcccCHhHcceEEEecCCCcEEehhhh
Confidence 97 466665 47788999998754210 11111111111100000 000011121 0111112358999999999
Q ss_pred cccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeeecCCC
Q psy12356 197 AAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~~h~ 266 (400)
+.++|+...+.|+....+....+|++-..+|..+.|||+|+++++.+.-||+|||+++...|+++++.|.
T Consensus 253 q~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~~h~ 322 (460)
T COG5170 253 QSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIPMHC 322 (460)
T ss_pred hhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeechHH
Confidence 9999999988886544333445567777899999999999999999999999999999989999998784
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-21 Score=196.65 Aligned_cols=212 Identities=11% Similarity=0.049 Sum_probs=134.8
Q ss_pred eeEEEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..|.+|+|+|+ +++||||+.||+|+|||+.+..... .....++..+.+|. ..|.+|+|+|++.
T Consensus 75 ~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~---~~i~~p~~~L~gH~------------~~V~sVaf~P~g~- 138 (568)
T PTZ00420 75 SSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESV---KEIKDPQCILKGHK------------KKISIIDWNPMNY- 138 (568)
T ss_pred CCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccc---cccccceEEeecCC------------CcEEEEEECCCCC-
Confidence 46999999996 8999999999999999987532100 00012344667786 4599999999863
Q ss_pred ceEEEeeCCCeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
..+++++.|++|+|||+++++. ..+...|.+++|+|+| .+|++++.|++|+|||++++.....+..+........+
T Consensus 139 ~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG-~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v 217 (568)
T PTZ00420 139 YIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKG-NLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNI 217 (568)
T ss_pred eEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCC-CEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEE
Confidence 2345678899999999988762 1244679999999985 78999999999999999998543221111000000001
Q ss_pred eceeccCchhhhhhcccCcceeecCCCC----CeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRK----PAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d----g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
+... +.++....++++.| +.|+|||++.... ++..+. +..+.+.+...-.+++
T Consensus 218 ~~~~----------fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~---pl~~~~----------ld~~~~~L~p~~D~~t 274 (568)
T PTZ00420 218 WIDG----------LGGDDNYILSTGFSKNNMREMKLWDLKNTTS---ALVTMS----------IDNASAPLIPHYDEST 274 (568)
T ss_pred Eeee----------EcCCCCEEEEEEcCCCCccEEEEEECCCCCC---ceEEEE----------ecCCccceEEeeeCCC
Confidence 1000 01232222222222 4899999996322 112211 1122233444445667
Q ss_pred CcEEEEe-cCCeEEEEeCCCC
Q psy12356 236 GRYMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~ 255 (400)
|.+++++ +|++||+|++..+
T Consensus 275 g~l~lsGkGD~tIr~~e~~~~ 295 (568)
T PTZ00420 275 GLIYLIGKGDGNCRYYQHSLG 295 (568)
T ss_pred CCEEEEEECCCeEEEEEccCC
Confidence 8888765 8999999999875
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=169.81 Aligned_cols=242 Identities=16% Similarity=0.194 Sum_probs=163.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+|..+....-|++||||+.|++||||.+... +..+++.++.||. +.|..++|..-..+..
T Consensus 13 ~IHda~lDyygkrlATcsSD~tVkIf~v~~n--------~~s~ll~~L~Gh~------------GPVwqv~wahPk~G~i 72 (299)
T KOG1332|consen 13 MIHDAQLDYYGKRLATCSSDGTVKIFEVRNN--------GQSKLLAELTGHS------------GPVWKVAWAHPKFGTI 72 (299)
T ss_pred hhhHhhhhhhcceeeeecCCccEEEEEEcCC--------CCceeeeEecCCC------------CCeeEEeecccccCcE
Confidence 4556667778999999999999999998754 2335677899997 5699999965333345
Q ss_pred EEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCC-CCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
+++++.|+.|.||.-++|+. ..|...|++|+|.|.+ +-+||++++||.|.+.+.+....
T Consensus 73 LAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~-------------- 138 (299)
T KOG1332|consen 73 LASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGG-------------- 138 (299)
T ss_pred eeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCC--------------
Confidence 66688999999999988862 3467889999999976 34678889999999998766410
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC--
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS-- 235 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd-- 235 (400)
|+.. +. ...|.-.|++|+|.|-
T Consensus 139 -----------------------------------w~t~---------ki------------~~aH~~GvnsVswapa~~ 162 (299)
T KOG1332|consen 139 -----------------------------------WTTS---------KI------------VFAHEIGVNSVSWAPASA 162 (299)
T ss_pred -----------------------------------ccch---------hh------------hhccccccceeeecCcCC
Confidence 0000 00 1246667888888875
Q ss_pred -C-----------cEEEEe-cCCeEEEEeCCCCCCce-eeecCCC-cCCCC-----------cccCCCCCceeecCcccc
Q psy12356 236 -G-----------RYMISR-DYLCVKVWDLHMESRPV-ETYPTHT-KEENG-----------QLRDPSNITALRVPQIKP 289 (400)
Q Consensus 236 -g-----------~~las~-~D~tIklWD~~~~~~~l-~~~~~h~-~~~~g-----------~~~~~~~~~~i~l~~~~~ 289 (400)
| +.|+|+ .|++||||+...+.-.+ +++++|. +.+|- .+++.++++++-+|.-.
T Consensus 163 ~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~- 241 (299)
T KOG1332|consen 163 PGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD- 241 (299)
T ss_pred CccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEec-
Confidence 5 568875 69999999999864222 3488885 22211 12233444444333211
Q ss_pred cceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCe
Q psy12356 290 IELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQ 368 (400)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~ 368 (400)
.| +.-+ +..+...-...+.+++||+.|..||-+ +|+.|.+|.-+...+
T Consensus 242 ~e----------------~e~w---------------k~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~Gk 290 (299)
T KOG1332|consen 242 EE----------------YEPW---------------KKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVDGK 290 (299)
T ss_pred Cc----------------cCcc---------------cccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCCCCc
Confidence 00 0000 001111234578999999999999986 799999998765444
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-20 Score=168.83 Aligned_cols=292 Identities=13% Similarity=0.196 Sum_probs=181.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
-|++|.|.+-|+++||||.|++|+|||.+... +...+...++.|.. .|..|.|.+-..+..
T Consensus 15 lihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s-------~~W~~Ts~Wrah~~------------Si~rV~WAhPEfGqv 75 (361)
T KOG2445|consen 15 LIHDVSFDFYGRRMATCSSDQTVKIWDSTSDS-------GTWSCTSSWRAHDG------------SIWRVVWAHPEFGQV 75 (361)
T ss_pred eeeeeeecccCceeeeccCCCcEEEEeccCCC-------CceEEeeeEEecCC------------cEEEEEecCccccce
Confidence 38999999999999999999999999976543 56667778888874 489999977554445
Q ss_pred EEEeeCCCeEEEEEccCCCccc-------------ccccEEEEEEecCC-CCEEEEEeCCCeEEEEeccccccccc--cc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEE-------------LNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDR--HS 148 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~-------------~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~--~~ 148 (400)
++++|.|++++||.-...+.+. -.+.|++|+|.|.. +-.+|+++.||++||++.-....+.. ..
T Consensus 76 vA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq 155 (361)
T KOG2445|consen 76 VATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQ 155 (361)
T ss_pred EEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhh
Confidence 6668999999999864322211 13569999999975 35689999999999999765521110 00
Q ss_pred ceec----cC------cccceeceeccCchhhhhhcccCcceeecC---CCCCeEEEeecccccccCcccccccCCCCCC
Q psy12356 149 KCLI----EG------TNCNCQGLIVPESKREERQSSQNRREKEDN---RRKPAIRLCDMRAAALCDRHSKFFEEPEDPT 215 (400)
Q Consensus 149 ~~~~----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 215 (400)
..+. .. ..|.-|+. + +...-..+++.. ..-+.++||...... .+....
T Consensus 156 ~Ei~~~~~pp~~~~~~~~CvsWn~--s-------r~~~p~iAvgs~e~a~~~~~~~Iye~~e~~-----rKw~kv----- 216 (361)
T KOG2445|consen 156 HEIQNVIDPPGKNKQPCFCVSWNP--S-------RMHEPLIAVGSDEDAPHLNKVKIYEYNENG-----RKWLKV----- 216 (361)
T ss_pred hhhhhccCCcccccCcceEEeecc--c-------cccCceEEEEcccCCccccceEEEEecCCc-----ceeeee-----
Confidence 0000 00 01111210 0 000111222221 122477888654321 111110
Q ss_pred CcccccccccCeEEEEECCC-Cc---EEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCccccc
Q psy12356 216 NKSFFSEIISSISDVKISNS-GR---YMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPI 290 (400)
Q Consensus 216 ~~~~~~~h~~~V~~v~fSpd-g~---~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~ 290 (400)
..+.+|+.+|++|+|.|+ |+ +||. +.|| |+||.++....++.. . + . .++...+
T Consensus 217 --a~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~--e-e-~-----~~~~~~~---------- 274 (361)
T KOG2445|consen 217 --AELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEE--E-E-V-----LAPDLMT---------- 274 (361)
T ss_pred --hhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhh--h-c-c-----cCCCCcc----------
Confidence 113478899999999997 54 4554 4688 999999864333311 0 0 0 0001110
Q ss_pred ceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccC--C
Q psy12356 291 ELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEIT--D 367 (400)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~--~ 367 (400)
+..|.-|+. ..+|...|.++.|+=-|..|+|+ +||.||+|...-. -
T Consensus 275 ----------------~l~v~~vs~---------------~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~ 323 (361)
T KOG2445|consen 275 ----------------DLPVEKVSE---------------LDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLW 323 (361)
T ss_pred ----------------ccceEEeee---------------ccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhh
Confidence 111222221 13689999999999999999995 8999999986432 3
Q ss_pred eeEEEEeecCC--cccchhhhh
Q psy12356 368 QSFNIVDIKPT--NMEELNEVR 387 (400)
Q Consensus 368 ~~~~~~~~~~~--~~~~~~~~~ 387 (400)
.|.-++...|+ |-+.-+-.+
T Consensus 324 kC~sv~~~e~~~~~~~~~~a~~ 345 (361)
T KOG2445|consen 324 KCTSVLKAEGSVTKPDFSQALT 345 (361)
T ss_pred eeeeEEeccCCCCCcccccccC
Confidence 57788888776 665554443
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=197.52 Aligned_cols=217 Identities=19% Similarity=0.263 Sum_probs=160.6
Q ss_pred ceeeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 2 LVYMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 2 ~~~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
+.|....|+|+. +.++||||+..|.|.+||+.... ..+.+..|..|+. .|+++.|++..
T Consensus 86 ~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~--------rnk~l~~f~EH~R------------s~~~ldfh~te 145 (839)
T KOG0269|consen 86 KFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKSI--------RNKLLTVFNEHER------------SANKLDFHSTE 145 (839)
T ss_pred eeeehhhcccccchhhhheeecCCCcEEEEecCccc--------cchhhhHhhhhcc------------ceeeeeeccCC
Confidence 357778899975 78999999999999999998532 2234557778874 49999999987
Q ss_pred CCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 81 NQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 81 ~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
+ ..++++|.|++||+||++... ...-...|+.|.|+|..++.|+++.+.|.+++||+|.... |...+..
T Consensus 146 p-~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r------~~~k~~A 218 (839)
T KOG0269|consen 146 P-NILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR------CEKKLTA 218 (839)
T ss_pred c-cEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchh------HHHHhhc
Confidence 5 466678899999999998654 2233467999999998889999999999999999998853 2222221
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
++... ..+.-.|++-.+|+|++|++|+|||+....... ..+ + .-..+|..|+|-|+-
T Consensus 219 H~GpV--------~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~--~~t------------I-nTiapv~rVkWRP~~ 275 (839)
T KOG0269|consen 219 HNGPV--------LCLNWHPNREWLATGGRDKMVKIWDMTDSRAKP--KHT------------I-NTIAPVGRVKWRPAR 275 (839)
T ss_pred ccCce--------EEEeecCCCceeeecCCCccEEEEeccCCCccc--eeE------------E-eecceeeeeeeccCc
Confidence 11111 111224788889999999999999998543210 000 1 223689999999987
Q ss_pred cE-EEEe---cCCeEEEEeCCCCCCceeeecCCCcC
Q psy12356 237 RY-MISR---DYLCVKVWDLHMESRPVETYPTHTKE 268 (400)
Q Consensus 237 ~~-las~---~D~tIklWD~~~~~~~l~~~~~h~~~ 268 (400)
++ ||++ .|..|+|||++.+..|..+|..|..+
T Consensus 276 ~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~ 311 (839)
T KOG0269|consen 276 SYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDS 311 (839)
T ss_pred cchhhhhhccccceEEEEeeccccccceeeeccCcc
Confidence 75 5543 48999999999998898999888643
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-21 Score=173.77 Aligned_cols=281 Identities=17% Similarity=0.232 Sum_probs=188.0
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|+.|+-..--..++++|.|.+.+||.++.+ +++.+++||. +.|++|+|+|.+. .+
T Consensus 151 iW~Vaa~~tqpi~gtASADhTA~iWs~Esg-----------~CL~~Y~GH~------------GSVNsikfh~s~~--L~ 205 (481)
T KOG0300|consen 151 IWHVAADSTQPICGTASADHTARIWSLESG-----------ACLATYTGHT------------GSVNSIKFHNSGL--LL 205 (481)
T ss_pred eeeehhhcCCcceeecccccceeEEeeccc-----------cceeeecccc------------cceeeEEeccccc--eE
Confidence 445555444558999999999999999864 4677899998 4599999998763 56
Q ss_pred EEeeCCCeEEEEE------ccCC--------C--c----------------------------ccccccEEEEEEecCCC
Q psy12356 86 LLSTNDQSFNIVD------IKPT--------N--M----------------------------EELNEVITAAEFHPIDC 121 (400)
Q Consensus 86 l~ss~D~tI~lWd------~~~~--------~--~----------------------------~~~~~~V~sv~f~p~~~ 121 (400)
++++.|++..||. +... + . .+|.+.|.+..|-. ++
T Consensus 206 lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~-gg 284 (481)
T KOG0300|consen 206 LTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA-GG 284 (481)
T ss_pred EEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc-Cc
Confidence 6789999999997 2210 0 0 01223455666655 45
Q ss_pred CEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccccccc
Q psy12356 122 NLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALC 201 (400)
Q Consensus 122 ~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~ 201 (400)
+.++++|-|.+..+||+.++.++....++...+.-| ...|..+.+.+.++|.+.||||.|..-.
T Consensus 285 ~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHc---------------stHptQrLVvTsSrDtTFRLWDFReaI~- 348 (481)
T KOG0300|consen 285 QQMVTASWDRTANLWDVETGEVVNILTGHDSELTHC---------------STHPTQRLVVTSSRDTTFRLWDFREAIQ- 348 (481)
T ss_pred ceeeeeeccccceeeeeccCceeccccCcchhcccc---------------ccCCcceEEEEeccCceeEeccchhhcc-
Confidence 678999999999999999996654333332222211 2236667778888999999999994211
Q ss_pred CcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCce
Q psy12356 202 DRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITA 281 (400)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~ 281 (400)
.. ..|.||+..|+++.|.-|.+.+.+++|.||||||+++-..||.+++..+ +-.+
T Consensus 349 --sV------------~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtdS--~~NR--------- 403 (481)
T KOG0300|consen 349 --SV------------AVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTDS--PANR--------- 403 (481)
T ss_pred --ee------------eeecccccceeEEEEecCCceeecCCCceEEEeeeccccCcceeeecCC--ccce---------
Confidence 11 2366999999999999998887778899999999998778888886432 1111
Q ss_pred eecCcccccceeeccCccceeccccccc-eEEEEEcCCCcEEeecccchhhcccccceeEEEEccCC--CEEEEe-cCCe
Q psy12356 282 LRVPQIKPIELTVEASPRRIFANAHTYH-INSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQ--ETYLSA-DDLR 357 (400)
Q Consensus 282 i~l~~~~~~~~~~~~~~~~~~~~~~~~~-i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg--~~las~-~D~~ 357 (400)
+. .....++.+.+|+.. |.-..+ +|+.++.-+ +.-.+||...|.|++|+.+- .-|.++ -|..
T Consensus 404 va-----------vs~g~~iIAiPhDNRqvRlfDl--nG~RlaRlP-rtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~ 469 (481)
T KOG0300|consen 404 VA-----------VSKGHPIIAIPHDNRQVRLFDL--NGNRLARLP-RTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRM 469 (481)
T ss_pred eE-----------eecCCceEEeccCCceEEEEec--CCCccccCC-cccccccceeeeeeeccccCcccccccccccce
Confidence 10 011111223345442 333222 344443211 11236999999999998775 347776 5999
Q ss_pred EEEEeCccCC
Q psy12356 358 INLWHLEITD 367 (400)
Q Consensus 358 i~lW~~~~~~ 367 (400)
+-=|+++.+.
T Consensus 470 v~gW~in~p~ 479 (481)
T KOG0300|consen 470 VAGWKINTPT 479 (481)
T ss_pred eeeeEecccC
Confidence 9999987643
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-21 Score=199.06 Aligned_cols=240 Identities=18% Similarity=0.253 Sum_probs=165.3
Q ss_pred eEEEEEECCCCCeEEEec--CCCeEEEEEcCCCCcc-ccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELLATGD--KGGRVVIFQRDPLSKT-SIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s--~Dg~I~iwd~~~~~~~-~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.|.+|+.+|||..+|||+ .||.++||+.+.--.. ......-.+.+.+...|. ..|+||+|+||+.
T Consensus 15 ~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~------------~sv~CVR~S~dG~ 82 (942)
T KOG0973|consen 15 SIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHD------------GSVNCVRFSPDGS 82 (942)
T ss_pred eEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeecccc------------CceeEEEECCCCC
Confidence 588999999999999999 9999999997532100 000000012233445555 4599999999985
Q ss_pred CceEEEeeCCCeEEEEEccC----------CC------------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKP----------TN------------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~----------~~------------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
.++++|+|+.|-||+... |. +++|...|..++|+|++ .+|||+|.|++|.|||.+
T Consensus 83 --~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~-~~lvS~s~DnsViiwn~~ 159 (942)
T KOG0973|consen 83 --YLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDD-SLLVSVSLDNSVIIWNAK 159 (942)
T ss_pred --eEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCc-cEEEEecccceEEEEccc
Confidence 677789999999999873 10 12456679999999975 899999999999999987
Q ss_pred cccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccc
Q psy12356 140 AAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSF 219 (400)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
+...+ +.
T Consensus 160 tF~~~-------------------------------------------------------------~v------------ 166 (942)
T KOG0973|consen 160 TFELL-------------------------------------------------------------KV------------ 166 (942)
T ss_pred cceee-------------------------------------------------------------ee------------
Confidence 76211 01
Q ss_pred ccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCc
Q psy12356 220 FSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASP 298 (400)
Q Consensus 220 ~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~ 298 (400)
+.+|.+.|-.|.|.|-|+|+|+ ++|++|+||++.+.+ ..+.+.++-.. .
T Consensus 167 l~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~-i~k~It~pf~~----------------------------~- 216 (942)
T KOG0973|consen 167 LRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWG-IEKSITKPFEE----------------------------S- 216 (942)
T ss_pred eecccccccceEECCccCeeeeecCCceEEEEEcccce-eeEeeccchhh----------------------------C-
Confidence 2367788999999999999998 689999999987643 34444433100 0
Q ss_pred cceeccccccceEEEEEcCCCcEEeecc-------------cchh-----hcccccceeEEEEccC-----CC-------
Q psy12356 299 RRIFANAHTYHINSISVNSDQLTVEASP-------------RGIF-----ADAHTYHISSTSVNSD-----QE------- 348 (400)
Q Consensus 299 ~~~~~~~~~~~i~~i~~s~dg~~~~~~~-------------~~~~-----~~gh~~~V~~i~fspD-----g~------- 348 (400)
+-.-.+.-+++||||++|++.. +..| .-||..++..+.|+|- .+
T Consensus 217 ------~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~ 290 (942)
T KOG0973|consen 217 ------PLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQP 290 (942)
T ss_pred ------CCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCC
Confidence 0001134456777777776421 0112 1389999999999882 11
Q ss_pred -----EEEEe-cCCeEEEEeCccCCe
Q psy12356 349 -----TYLSA-DDLRINLWHLEITDQ 368 (400)
Q Consensus 349 -----~las~-~D~~i~lW~~~~~~~ 368 (400)
.+|+| .|++|-||.....+.
T Consensus 291 ~~~y~i~AvgSqDrSlSVW~T~~~RP 316 (942)
T KOG0973|consen 291 NCYYCIAAVGSQDRSLSVWNTALPRP 316 (942)
T ss_pred CcceEEEEEecCCccEEEEecCCCCc
Confidence 34555 699999999876553
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-19 Score=158.00 Aligned_cols=286 Identities=15% Similarity=0.184 Sum_probs=176.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcch-----hhcccccccceeeEEEEEe
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEF-----DYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~-----~~~~~~~~~~~V~~v~~sp 78 (400)
-.|++|+|.|.|.+-|.||..++.||-....-.. .-.+|++.- .+-+..-|-+.|.+++|+|
T Consensus 33 qairav~fhp~g~lyavgsnskt~ric~yp~l~~-------------~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~ 99 (350)
T KOG0641|consen 33 QAIRAVAFHPAGGLYAVGSNSKTFRICAYPALID-------------LRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP 99 (350)
T ss_pred hheeeEEecCCCceEEeccCCceEEEEccccccC-------------cccccccccCCCeEEeeeccccCccEEEEEecC
Confidence 3689999999999999999999999987543110 001222211 1111222335599999999
Q ss_pred ccCCceEEEeeCCCeEEEEEccCCC---------cccccccEEEEEEecC---CCCEEEEEeC-CCeEEEEecccccccc
Q psy12356 79 RKNQAHFLLSTNDQSFNIVDIKPTN---------MEELNEVITAAEFHPI---DCNLFVYSSS-KGTIRLCDMRAAALCD 145 (400)
Q Consensus 79 ~~~~~~~l~ss~D~tI~lWd~~~~~---------~~~~~~~V~sv~f~p~---~~~~las~s~-Dg~i~lWD~~~~~~~~ 145 (400)
+++ .++++++|++||+..+.... +.-|.+.|+.++|-.+ ++.++++++. |..|.+=|..++.-..
T Consensus 100 ~ge--liatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~ 177 (350)
T KOG0641|consen 100 CGE--LIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFH 177 (350)
T ss_pred ccC--eEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcce
Confidence 985 66678999999998775322 1235678999999533 3457788776 7788888877763211
Q ss_pred ---cccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccc
Q psy12356 146 ---RHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222 (400)
Q Consensus 146 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
+|..++..+ +. =++...++++.|.+||.||+|...+....-..|++-. +
T Consensus 178 a~sghtghilal------------------ys-wn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~g---l------ 229 (350)
T KOG0641|consen 178 ALSGHTGHILAL------------------YS-WNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGG---L------ 229 (350)
T ss_pred eecCCcccEEEE------------------EE-ecCcEEEccCCCceEEEEeeeccceeeeccCcccCCC---c------
Confidence 222222211 11 1233467788999999999998654211101111100 0
Q ss_pred cccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCc-------CCCCcc-cCCCCCceeecCccccccee
Q psy12356 223 IISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTK-------EENGQL-RDPSNITALRVPQIKPIELT 293 (400)
Q Consensus 223 h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~-------~~~g~~-~~~~~~~~i~l~~~~~~~~~ 293 (400)
-...|.+|+..|.|++|+++ .|.+..|+|++.+ ++++.|-.|+. +|...| +..+.+-.||+-++..+
T Consensus 230 essavaav~vdpsgrll~sg~~dssc~lydirg~-r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgd--- 305 (350)
T KOG0641|consen 230 ESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG-RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD--- 305 (350)
T ss_pred ccceeEEEEECCCcceeeeccCCCceEEEEeeCC-ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccc---
Confidence 12468999999999999987 6899999999965 68888866641 111111 11122222221111000
Q ss_pred eccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 294 VEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 294 ~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
-.|+-.|-- ...|.+.+-++.|+|..-.++|+ .|.|+.+|.+.
T Consensus 306 ----------la~el~~~v------------------v~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 306 ----------LAHELPIMV------------------VAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred ----------hhhcCceEE------------------EEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 001111100 13588888899999999877775 79999999764
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.4e-21 Score=182.25 Aligned_cols=198 Identities=15% Similarity=0.126 Sum_probs=141.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+++|+++|..+.|+|.|+.|++||+++++ ++..|. +. ..+++|.|+|++ ...
T Consensus 260 ~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~-----------~~~~f~--~~-----------~~~~cvkf~pd~-~n~ 314 (503)
T KOG0282|consen 260 PVRDASFNNCGTSFLSASFDRFLKLWDTETGQ-----------VLSRFH--LD-----------KVPTCVKFHPDN-QNI 314 (503)
T ss_pred hhhhhhccccCCeeeeeecceeeeeeccccce-----------EEEEEe--cC-----------CCceeeecCCCC-CcE
Confidence 37789999999999999999999999999753 344443 21 247899999997 357
Q ss_pred EEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++++.|+.|+.||++++++ ..|.+.|.++.|-|.+ .+|+++++|+++++|+.+.+..+.- +.......+
T Consensus 315 fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g-~rFissSDdks~riWe~~~~v~ik~----i~~~~~hsm- 388 (503)
T KOG0282|consen 315 FLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEG-RRFISSSDDKSVRIWENRIPVPIKN----IADPEMHTM- 388 (503)
T ss_pred EEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCC-ceEeeeccCccEEEEEcCCCccchh----hcchhhccC-
Confidence 88889999999999999984 3466789999999975 7899999999999999998843210 000000000
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccc--cCeEEEEECCCCcE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEII--SSISDVKISNSGRY 238 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~fSpdg~~ 238 (400)
..+...|++...+.-+.|+.|-++.+...-. .+ .+..|.+|. +.-..|.|||||++
T Consensus 389 ---------P~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r-~n------------kkK~feGh~vaGys~~v~fSpDG~~ 446 (503)
T KOG0282|consen 389 ---------PCLTLHPNGKWFAAQSMDNYIAIFSTVPPFR-LN------------KKKRFEGHSVAGYSCQVDFSPDGRT 446 (503)
T ss_pred ---------cceecCCCCCeehhhccCceEEEEecccccc-cC------------HhhhhcceeccCceeeEEEcCCCCe
Confidence 0111235555555556788888887543110 00 112245664 34557999999999
Q ss_pred EEEe-cCCeEEEEeCCCC
Q psy12356 239 MISR-DYLCVKVWDLHME 255 (400)
Q Consensus 239 las~-~D~tIklWD~~~~ 255 (400)
|+++ +||.+.+||.++-
T Consensus 447 l~SGdsdG~v~~wdwkt~ 464 (503)
T KOG0282|consen 447 LCSGDSDGKVNFWDWKTT 464 (503)
T ss_pred EEeecCCccEEEeechhh
Confidence 9987 5899999999963
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.6e-21 Score=170.75 Aligned_cols=230 Identities=13% Similarity=0.140 Sum_probs=139.0
Q ss_pred eEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|.+|+||| ...+++.+|.||+||+|+++... .... +....|. +.|.+++|+.|+.
T Consensus 29 sIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g--------~~~~-ka~~~~~------------~PvL~v~Wsddgs-- 85 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSWDGTVRIWEVQNSG--------QLVP-KAQQSHD------------GPVLDVCWSDDGS-- 85 (347)
T ss_pred chheeEeccccCceEEecccCCceEEEEEecCC--------cccc-hhhhccC------------CCeEEEEEccCCc--
Confidence 478999999 67788899999999999998531 1111 2233443 5699999998874
Q ss_pred eEEEeeCCCeEEEEEccCCCc---ccccccEEEEEEecCC-CCEEEEEeCCCeEEEEeccccccccccc---ce-----e
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM---EELNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDRHS---KC-----L 151 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~~~---~~-----~ 151 (400)
++++++.|+++++||+.+++. ..|.+.|.++.|-+-. ...|+|||-|.|||.||+|....+.+.. ++ +
T Consensus 86 kVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~ 165 (347)
T KOG0647|consen 86 KVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVL 165 (347)
T ss_pred eEEeeccCCceEEEEccCCCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhcc
Confidence 788889999999999999984 4578889999987632 2378999999999999999875432211 00 0
Q ss_pred ccC-----c--ccceeceeccCchhhh-----------hhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCC
Q psy12356 152 IEG-----T--NCNCQGLIVPESKREE-----------RQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPED 213 (400)
Q Consensus 152 ~~~-----~--~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~ 213 (400)
... . ...+++|.-++..... +....+....+-|+..|.+-+-.+..+... ..|....+
T Consensus 166 ~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~----~nFtFkCH 241 (347)
T KOG0647|consen 166 YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPK----DNFTFKCH 241 (347)
T ss_pred CceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCcc----CceeEEEe
Confidence 000 0 0111222111100000 000111111233445666666666543221 11211110
Q ss_pred CCCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeec
Q psy12356 214 PTNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 214 ~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~ 263 (400)
..... ..+....|++|+|+|.-..|++ ++||+...||-.... .|++++
T Consensus 242 R~~~~-~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~-kLk~s~ 290 (347)
T KOG0647|consen 242 RSTNS-VNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDART-KLKTSE 290 (347)
T ss_pred ccCCC-CCCceEEecceEeecccceEEEecCCceEEEecchhhh-hhhccC
Confidence 00000 0011246899999998777876 689999999988653 355543
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.8e-20 Score=169.51 Aligned_cols=203 Identities=18% Similarity=0.285 Sum_probs=144.7
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+..+.|+|++++|++++.||.|++||+.+.+ ....+..|. ..|.++.|+|++ .
T Consensus 53 ~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~-----------~~~~~~~~~------------~~i~~~~~~~~~---~ 106 (289)
T cd00200 53 PVRDVAASADGTYLASGSSDKTIRLWDLETGE-----------CVRTLTGHT------------SYVSSVAFSPDG---R 106 (289)
T ss_pred ceeEEEECCCCCEEEEEcCCCeEEEEEcCccc-----------ceEEEeccC------------CcEEEEEEcCCC---C
Confidence 46789999999999999999999999998532 234566665 348899999874 4
Q ss_pred EEE-eeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 85 FLL-STNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l~-ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
+++ ++.|+.|++||+.+++ +..+...|.+++|+|+ +.++++++.|+.|++||++++........+ ...+
T Consensus 107 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~-----~~~i 180 (289)
T cd00200 107 ILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPD-GTFVASSSQDGTIKLWDLRTGKCVATLTGH-----TGEV 180 (289)
T ss_pred EEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCc-CCEEEEEcCCCcEEEEEccccccceeEecC-----cccc
Confidence 554 5559999999998665 2345667999999997 467777777999999999876432211100 0011
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+ ...+++...+.++.|+.+++||++.+... .. +..|...+.+++|+|++.++
T Consensus 181 ~~~----------~~~~~~~~l~~~~~~~~i~i~d~~~~~~~----~~------------~~~~~~~i~~~~~~~~~~~~ 234 (289)
T cd00200 181 NSV----------AFSPDGEKLLSSSSDGTIKLWDLSTGKCL----GT------------LRGHENGVNSVAFSPDGYLL 234 (289)
T ss_pred ceE----------EECCCcCEEEEecCCCcEEEEECCCCcee----cc------------hhhcCCceEEEEEcCCCcEE
Confidence 111 22344433334445999999999864321 11 22466789999999999999
Q ss_pred EEec-CCeEEEEeCCCCCCceeeecCCC
Q psy12356 240 ISRD-YLCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 240 as~~-D~tIklWD~~~~~~~l~~~~~h~ 266 (400)
++++ |+.|++||+.++ .++..+.+|.
T Consensus 235 ~~~~~~~~i~i~~~~~~-~~~~~~~~~~ 261 (289)
T cd00200 235 ASGSEDGTIRVWDLRTG-ECVQTLSGHT 261 (289)
T ss_pred EEEcCCCcEEEEEcCCc-eeEEEccccC
Confidence 8876 999999999975 4667777664
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=194.19 Aligned_cols=123 Identities=17% Similarity=0.310 Sum_probs=99.8
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCc-------cccCCCCcceeeeeeeccCcchhhcccccccceeeEEE
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSK-------TSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 75 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~-------~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~ 75 (400)
.+.|+||+|||||++||+||+|+.|.||...+... ...+....++...++.+|..+ |..|+
T Consensus 69 ~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~D------------V~Dv~ 136 (942)
T KOG0973|consen 69 DGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSD------------VLDVN 136 (942)
T ss_pred cCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCc------------cceec
Confidence 36799999999999999999999999999884110 001112345667788999865 99999
Q ss_pred EEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 76 WLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 76 ~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
|+|++. .+++++.|++|-||+..+.+ ++.|.+.|-++.|.|-| ++|||-+.|++|++|++.+
T Consensus 137 Wsp~~~--~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~G-ky~ASqsdDrtikvwrt~d 202 (942)
T KOG0973|consen 137 WSPDDS--LLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIG-KYFASQSDDRTLKVWRTSD 202 (942)
T ss_pred cCCCcc--EEEEecccceEEEEccccceeeeeeecccccccceEECCcc-CeeeeecCCceEEEEEccc
Confidence 999763 45557889999999998876 46788999999999985 8999999999999999655
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.4e-21 Score=177.28 Aligned_cols=236 Identities=18% Similarity=0.321 Sum_probs=169.4
Q ss_pred EEEEEECCCC-CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDG-ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG-~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
|.|++=+|.- ..+|||+.||.|+|||+... .++++|++|. +-|..|++.. ..
T Consensus 69 V~~lakhp~~ls~~aSGs~DG~VkiWnlsqR-----------~~~~~f~AH~------------G~V~Gi~v~~----~~ 121 (433)
T KOG0268|consen 69 VSCLAKHPNKLSTVASGSCDGEVKIWNLSQR-----------ECIRTFKAHE------------GLVRGICVTQ----TS 121 (433)
T ss_pred cchhhcCcchhhhhhccccCceEEEEehhhh-----------hhhheeeccc------------CceeeEEecc----cc
Confidence 5677777766 78999999999999999742 3467899997 3488888764 26
Q ss_pred EEEeeCCCeEEEEEccCC---------------------------C-cc----c----c------cccEEEEEEecCCCC
Q psy12356 85 FLLSTNDQSFNIVDIKPT---------------------------N-ME----E----L------NEVITAAEFHPIDCN 122 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~---------------------------~-~~----~----~------~~~V~sv~f~p~~~~ 122 (400)
+++++.|++||.|-++.. + +. . . ...|.++.|+|....
T Consensus 122 ~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETs 201 (433)
T KOG0268|consen 122 FFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETS 201 (433)
T ss_pred eEEecCCcceeeeeccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcch
Confidence 888999999999984321 0 00 0 0 134889999999888
Q ss_pred EEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccC
Q psy12356 123 LFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCD 202 (400)
Q Consensus 123 ~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~ 202 (400)
+|++|++|+.|.|+|+|.+..++. .+.+. ..+.+...|..+...+++.|..+.++|+|.-.
T Consensus 202 ILas~~sDrsIvLyD~R~~~Pl~K---Vi~~m-------------RTN~IswnPeafnF~~a~ED~nlY~~DmR~l~--- 262 (433)
T KOG0268|consen 202 ILASCASDRSIVLYDLRQASPLKK---VILTM-------------RTNTICWNPEAFNFVAANEDHNLYTYDMRNLS--- 262 (433)
T ss_pred heeeeccCCceEEEecccCCccce---eeeec-------------cccceecCccccceeeccccccceehhhhhhc---
Confidence 999999999999999999854321 11111 11233344666666677899999999999632
Q ss_pred cccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCce
Q psy12356 203 RHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITA 281 (400)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~ 281 (400)
++... ..+|.+.|.+|.|||.|+-++|+ -|++|||+.++.+... ..|
T Consensus 263 ~p~~v------------~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SR-diY------------------- 310 (433)
T KOG0268|consen 263 RPLNV------------HKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSR-DIY------------------- 310 (433)
T ss_pred ccchh------------hcccceeEEEeccCCCcchhccccccceEEEeecCCCcch-hhh-------------------
Confidence 22222 34788999999999999999876 4999999988854210 011
Q ss_pred eecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEE
Q psy12356 282 LRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINL 360 (400)
Q Consensus 282 i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~l 360 (400)
|+. . -..|.+|.||-|.++++|| +|+.||+
T Consensus 311 ------------------------htk--------------------R-----Mq~V~~Vk~S~Dskyi~SGSdd~nvRl 341 (433)
T KOG0268|consen 311 ------------------------HTK--------------------R-----MQHVFCVKYSMDSKYIISGSDDGNVRL 341 (433)
T ss_pred ------------------------hHh--------------------h-----hheeeEEEEeccccEEEecCCCcceee
Confidence 110 0 0136789999999999997 7999999
Q ss_pred EeCccCCe
Q psy12356 361 WHLEITDQ 368 (400)
Q Consensus 361 W~~~~~~~ 368 (400)
|.....++
T Consensus 342 Wka~Asek 349 (433)
T KOG0268|consen 342 WKAKASEK 349 (433)
T ss_pred eecchhhh
Confidence 99876553
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-20 Score=167.30 Aligned_cols=223 Identities=17% Similarity=0.278 Sum_probs=143.5
Q ss_pred eeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeee----eeeccCcchhhcccccccceeeEEEEEe
Q psy12356 4 YMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYS----TFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 4 ~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~----~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
|.|+++...| .|+|++||+.||.|.|||+..... .+.++-+.+ .-+.|.. +|-..|.++.|-|
T Consensus 44 GsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~----~e~s~li~k~~c~v~~~h~~--------~Hky~iss~~WyP 111 (397)
T KOG4283|consen 44 GSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATD----YEASGLIAKHKCIVAKQHEN--------GHKYAISSAIWYP 111 (397)
T ss_pred CccceeeeccccceEEeecCCCccEEEEEeccccc----hhhccceeheeeeccccCCc--------cceeeeeeeEEee
Confidence 5788999987 899999999999999999875320 000000000 0011211 1223477888888
Q ss_pred ccCCceEEEeeCCCeEEEEEccCCCc---ccccccEEEEEEecCC--CCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 79 RKNQAHFLLSTNDQSFNIVDIKPTNM---EELNEVITAAEFHPID--CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 79 ~~~~~~~l~ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~--~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
... +.+.++|.|.++|+||..+-+. -.+.+.|.+-+++|-. --++|+|..|-.|+|-|+.+|
T Consensus 112 ~Dt-GmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG------------ 178 (397)
T KOG4283|consen 112 IDT-GMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG------------ 178 (397)
T ss_pred ecC-ceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCC------------
Confidence 643 4677778899999998866441 1223344444444431 013444444445555554444
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
+.. ..+.||.+.|.+|.||
T Consensus 179 ---------------------------------------------s~s----------------H~LsGHr~~vlaV~Ws 197 (397)
T KOG4283|consen 179 ---------------------------------------------SFS----------------HTLSGHRDGVLAVEWS 197 (397)
T ss_pred ---------------------------------------------cce----------------eeeccccCceEEEEec
Confidence 321 1135899999999999
Q ss_pred CCCcEEE-Ee-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 234 NSGRYMI-SR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 234 pdg~~la-s~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
|...+++ ++ .|+.||+||++....|+..+..|.- .+.|.+ .
T Consensus 198 p~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~--------------k~~p~~----------------~------- 240 (397)
T KOG4283|consen 198 PSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNT--------------KRPPIL----------------K------- 240 (397)
T ss_pred cCceeEEEecCCCceEEEEEeecccceeEEeecccC--------------ccCccc----------------c-------
Confidence 9988765 54 5999999999987557777755521 111100 0
Q ss_pred EEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 312 SISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
...+|.+.|+.++|+.||.+++++ .|..+|+|+...++
T Consensus 241 ------------------~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 241 ------------------TNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred ------------------ccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 014689999999999999999996 69999999987655
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-20 Score=165.86 Aligned_cols=194 Identities=14% Similarity=0.208 Sum_probs=144.5
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+|.+|+|+.|.++|+||+.++-+||||++..+ .+...+.+|+ +.|..+-|.-. +..
T Consensus 102 ivk~~af~~ds~~lltgg~ekllrvfdln~p~----------App~E~~ght------------g~Ir~v~wc~e--D~~ 157 (334)
T KOG0278|consen 102 IVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK----------APPKEISGHT------------GGIRTVLWCHE--DKC 157 (334)
T ss_pred eeeeEEecccchhhhccchHHHhhhhhccCCC----------CCchhhcCCC------------CcceeEEEecc--Cce
Confidence 58999999999999999999999999998543 1234567887 45888888754 347
Q ss_pred EEEeeCCCeEEEEEccCCCc-c--cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM-E--ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~-~--~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
+|+++.|++|||||..++.. + .....|+++..+++| . +++...-++|+.||..+-.+++... ..+++..
T Consensus 158 iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG-~-ilTia~gssV~Fwdaksf~~lKs~k------~P~nV~S 229 (334)
T KOG0278|consen 158 ILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDG-R-ILTIAYGSSVKFWDAKSFGLLKSYK------MPCNVES 229 (334)
T ss_pred EEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCC-C-EEEEecCceeEEeccccccceeecc------Ccccccc
Confidence 88889999999999999873 2 345789999999985 3 5666777899999988764432111 0122222
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las 241 (400)
..+ .|+.-....|+.|..++.||..++..... + ..+|-++|.+|+|||||...|+
T Consensus 230 ASL----------~P~k~~fVaGged~~~~kfDy~TgeEi~~----~-----------nkgh~gpVhcVrFSPdGE~yAs 284 (334)
T KOG0278|consen 230 ASL----------HPKKEFFVAGGEDFKVYKFDYNTGEEIGS----Y-----------NKGHFGPVHCVRFSPDGELYAS 284 (334)
T ss_pred ccc----------cCCCceEEecCcceEEEEEeccCCceeee----c-----------ccCCCCceEEEEECCCCceeec
Confidence 111 24443455667999999999998764321 1 1378899999999999999997
Q ss_pred e-cCCeEEEEeCCCC
Q psy12356 242 R-DYLCVKVWDLHME 255 (400)
Q Consensus 242 ~-~D~tIklWD~~~~ 255 (400)
+ .|||||||.+..+
T Consensus 285 GSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 285 GSEDGTIRLWQTTPG 299 (334)
T ss_pred cCCCceEEEEEecCC
Confidence 5 6999999998864
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-20 Score=187.05 Aligned_cols=218 Identities=15% Similarity=0.192 Sum_probs=156.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+-|++++|..-+++|++||.|.+++|||..++ .+.++|.+|+. .|.++..-+ .
T Consensus 250 g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg-----------~C~~~l~gh~s------------tv~~~~~~~----~ 302 (537)
T KOG0274|consen 250 GGVWGLAFPSGGDKLVSGSTDKTERVWDCSTG-----------ECTHSLQGHTS------------SVRCLTIDP----F 302 (537)
T ss_pred CCceeEEEecCCCEEEEEecCCcEEeEecCCC-----------cEEEEecCCCc------------eEEEEEccC----c
Confidence 56889999888899999999999999998754 36788999984 366665543 2
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|.+||+|+++++.+ ..|.+.|+++..+ ..++++|+.|++|++||+++++ |+..+.++..
T Consensus 303 ~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~-------cl~sl~gH~~ 372 (537)
T KOG0274|consen 303 LLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGK-------CLKSLSGHTG 372 (537)
T ss_pred eEeeccCCceEEEEeccCcceEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhhce-------eeeeecCCcc
Confidence 455678999999999998873 3478899999997 3689999999999999999884 4444443221
Q ss_pred --eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccc-cccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 160 --QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAA-ALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
+.+.+. +. ....+++.|++|++||+++. .+. .+ +.+|..-|..+.+ .+
T Consensus 373 ~V~sl~~~----------~~-~~~~Sgs~D~~IkvWdl~~~~~c~----~t------------l~~h~~~v~~l~~--~~ 423 (537)
T KOG0274|consen 373 RVYSLIVD----------SE-NRLLSGSLDTTIKVWDLRTKRKCI----HT------------LQGHTSLVSSLLL--RD 423 (537)
T ss_pred eEEEEEec----------Cc-ceEEeeeeccceEeecCCchhhhh----hh------------hcCCccccccccc--cc
Confidence 222211 10 33456678999999999987 432 22 2356666755554 67
Q ss_pred cEEEEe-cCCeEEEEeCCCCCCceeeecC-CCc----CC--CCcccCCCCCceeecCccc
Q psy12356 237 RYMISR-DYLCVKVWDLHMESRPVETYPT-HTK----EE--NGQLRDPSNITALRVPQIK 288 (400)
Q Consensus 237 ~~las~-~D~tIklWD~~~~~~~l~~~~~-h~~----~~--~g~~~~~~~~~~i~l~~~~ 288 (400)
++|+++ .|++||+||..++. +++++++ |.. .. +-.+++++.++++++|++.
T Consensus 424 ~~Lvs~~aD~~Ik~WD~~~~~-~~~~~~~~~~~~v~~l~~~~~~il~s~~~~~~~l~dl~ 482 (537)
T KOG0274|consen 424 NFLVSSSADGTIKLWDAEEGE-CLRTLEGRHVGGVSALALGKEEILCSSDDGSVKLWDLR 482 (537)
T ss_pred ceeEeccccccEEEeecccCc-eeeeeccCCcccEEEeecCcceEEEEecCCeeEEEecc
Confidence 788875 69999999999874 7888887 421 11 1223456677788877654
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-19 Score=171.42 Aligned_cols=224 Identities=15% Similarity=0.206 Sum_probs=157.3
Q ss_pred eeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
-.|.+++||| +..-+|+.+ .-.|+||+..+. ..+++|..+. ..|.++.|-.||
T Consensus 27 ~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~-----------~~~k~~srFk------------~~v~s~~fR~DG-- 80 (487)
T KOG0310|consen 27 NSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTR-----------SVRKTFSRFK------------DVVYSVDFRSDG-- 80 (487)
T ss_pred CcceeEecCCCCCCceEEec-ccEEEEEecchh-----------hhhhhHHhhc------------cceeEEEeecCC--
Confidence 4689999999 333344443 357999997642 1233444433 348889998776
Q ss_pred ceEEEe-eCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 83 AHFLLS-TNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 83 ~~~l~s-s~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
+++++ ...|.|+|+|+++.. +..|+.+|..+.|+|+++.+|++|+.|+.+++||+.++..
T Consensus 81 -~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v-------------- 145 (487)
T KOG0310|consen 81 -RLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV-------------- 145 (487)
T ss_pred -eEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE--------------
Confidence 66665 458999999976643 4678899999999999989999999999999999987710
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
..+ +.+|+..|.+.+|+|-..
T Consensus 146 ----------------------------------~~~-------------------------l~~htDYVR~g~~~~~~~ 166 (487)
T KOG0310|consen 146 ----------------------------------QAE-------------------------LSGHTDYVRCGDISPAND 166 (487)
T ss_pred ----------------------------------EEE-------------------------ecCCcceeEeeccccCCC
Confidence 000 237889999999999644
Q ss_pred -EEEEec-CCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceeccccc
Q psy12356 238 -YMISRD-YLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHT 307 (400)
Q Consensus 238 -~las~~-D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (400)
+++|++ |++||+||++....++.+|+ |. ++|.|.++ ++++ ..+|+|++-
T Consensus 167 hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~------------------- 225 (487)
T KOG0310|consen 167 HIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAGG-NSVKVWDLT------------------- 225 (487)
T ss_pred eEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcCC-CeEEEEEec-------------------
Confidence 667765 89999999998755667775 32 23443322 2222 234555431
Q ss_pred cceEEEEEcCCCcEEeecccchhhcc-cccceeEEEEccCCCEEEEec-CCeEEEEeCc
Q psy12356 308 YHINSISVNSDQLTVEASPRGIFADA-HTYHISSTSVNSDQETYLSAD-DLRINLWHLE 364 (400)
Q Consensus 308 ~~i~~i~~s~dg~~~~~~~~~~~~~g-h~~~V~~i~fspDg~~las~~-D~~i~lW~~~ 364 (400)
++++.+...+ |...|+|+.+..|++.|+|+. |+.||++|+.
T Consensus 226 ----------------~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t 268 (487)
T KOG0310|consen 226 ----------------TGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTT 268 (487)
T ss_pred ----------------CCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEcc
Confidence 0111112223 999999999999999999985 9999999954
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=178.79 Aligned_cols=110 Identities=10% Similarity=0.197 Sum_probs=80.4
Q ss_pred EEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeE-EEEEeccCCceE
Q psy12356 7 EASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK-IRWLRRKNQAHF 85 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~-v~~sp~~~~~~~ 85 (400)
..|++-+. -.++++|.||++++|+-.+. .+-....|++|.. .|.. +++-+ .+..++
T Consensus 18 r~v~~~~~-~~i~s~sRd~t~~vw~~~~~---------~~l~~~~~~~~~g------------~i~~~i~y~e-~~~~~l 74 (745)
T KOG0301|consen 18 RAVAVTDG-VCIISGSRDGTVKVWAKKGK---------QYLETHAFEGPKG------------FIANSICYAE-SDKGRL 74 (745)
T ss_pred heeEecCC-eEEeecCCCCceeeeeccCc---------ccccceecccCcc------------eeeccceecc-ccCcce
Confidence 44555544 47999999999999997542 1222235666642 2444 77766 444578
Q ss_pred EEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 86 LLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
++++.|.+|.+|.+.... +++|...|++++...++ .++|||-|.|+|+|-...-
T Consensus 75 ~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~--~~iSgSWD~TakvW~~~~l 132 (745)
T KOG0301|consen 75 VVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDG--TLISGSWDSTAKVWRIGEL 132 (745)
T ss_pred EeecccceEEEEecCCCCchhhhhccccceeeeecCCcC--ceEecccccceEEecchhh
Confidence 889999999999998765 57899999999876653 4899999999999986443
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=9e-19 Score=165.76 Aligned_cols=288 Identities=13% Similarity=0.160 Sum_probs=181.1
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCcc-c-cCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKT-S-IPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~-~-~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.|.+|+++||++++.+++.||+|.=|++.++... . .+. . . .+..|-.+...-+ ..|...+.+++.+||+.
T Consensus 144 s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~-~--e---v~k~~~~~~k~~r-~~h~keil~~avS~Dgk- 215 (479)
T KOG0299|consen 144 SVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIER-D--E---VLKSHGNPLKESR-KGHVKEILTLAVSSDGK- 215 (479)
T ss_pred cceEEEeeccccceeecCCCcceeeeehhcCccccccccc-c--h---hhhhccCCCCccc-ccccceeEEEEEcCCCc-
Confidence 4789999999999999999999999998875421 0 000 0 0 0112222111111 13345688999999873
Q ss_pred ceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++++.|..|.|||.++.+ +..|.+.|.+++|--. ...+.++|.|++|++|++....++.+...+-- .
T Consensus 216 -ylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~g-t~~lys~s~Drsvkvw~~~~~s~vetlyGHqd-----~ 288 (479)
T KOG0299|consen 216 -YLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKG-TSELYSASADRSVKVWSIDQLSYVETLYGHQD-----G 288 (479)
T ss_pred -EEEecCCCceEEEecCcccchhhcccccccceeeeeeecC-ccceeeeecCCceEEEehhHhHHHHHHhCCcc-----c
Confidence 55567889999999999876 3678889999999764 56789999999999999988765433111100 0
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
+.++ ....-.+.+..+.+|.++|||++-.... -++.+|.+.+.+|+|=.+..+
T Consensus 289 v~~I----------daL~reR~vtVGgrDrT~rlwKi~eesq-----------------lifrg~~~sidcv~~In~~Hf 341 (479)
T KOG0299|consen 289 VLGI----------DALSRERCVTVGGRDRTVRLWKIPEESQ-----------------LIFRGGEGSIDCVAFINDEHF 341 (479)
T ss_pred eeee----------chhcccceEEeccccceeEEEeccccce-----------------eeeeCCCCCeeeEEEecccce
Confidence 0111 1111223344466999999999843211 113466688999999888878
Q ss_pred EEEecCCeEEEEeCCCCCCceeeec-CCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcC
Q psy12356 239 MISRDYLCVKVWDLHMESRPVETYP-THTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNS 317 (400)
Q Consensus 239 las~~D~tIklWD~~~~~~~l~~~~-~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~ 317 (400)
+.++++|+|.||++-.- +||-+.+ +|...++.. ..++.+||++++..|
T Consensus 342 vsGSdnG~IaLWs~~KK-kplf~~~~AHgv~~~~~------------------------------~~~~~~Witsla~i~ 390 (479)
T KOG0299|consen 342 VSGSDNGSIALWSLLKK-KPLFTSRLAHGVIPELD------------------------------PVNGNFWITSLAVIP 390 (479)
T ss_pred eeccCCceEEEeeeccc-CceeEeeccccccCCcc------------------------------ccccccceeeeEecc
Confidence 77788999999999874 5776653 453322210 011224455555555
Q ss_pred CCcEEeecc----cchhh-------------cccccceeEEEEccCCCEEEEe-c-CCeE-EEEeCcc
Q psy12356 318 DQLTVEASP----RGIFA-------------DAHTYHISSTSVNSDQETYLSA-D-DLRI-NLWHLEI 365 (400)
Q Consensus 318 dg~~~~~~~----~~~~~-------------~gh~~~V~~i~fspDg~~las~-~-D~~i-~lW~~~~ 365 (400)
...++++.. .++|. -.-.+-||+|+|+++|+.|+.+ + ...+ |-|-...
T Consensus 391 ~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~k~ 458 (479)
T KOG0299|consen 391 GSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCLKS 458 (479)
T ss_pred cCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEecccccccceeeEeec
Confidence 544444321 11111 0134679999999999977765 3 4443 3444433
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=8e-20 Score=169.09 Aligned_cols=213 Identities=15% Similarity=0.198 Sum_probs=144.3
Q ss_pred eeEEEEEECCC--CCeEEEecCCCeEEEEEcCCCCcc-----ccCCCCcceeeeeeeccCcchhhcccccccceeeEEEE
Q psy12356 4 YMREASQRFSD--GELLATGDKGGRVVIFQRDPLSKT-----SIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 76 (400)
Q Consensus 4 ~~v~~v~fspd--G~~Las~s~Dg~I~iwd~~~~~~~-----~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~ 76 (400)
+.|+-++-++- .-+.|+=+..|.|+||++...-.. ...+....+++.++.+|..+ =..|+|
T Consensus 152 g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~E------------Gy~LdW 219 (440)
T KOG0302|consen 152 GGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGE------------GYGLDW 219 (440)
T ss_pred cccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCcc------------ceeeec
Confidence 34555666654 457777788999999998652211 00112334566778888743 467999
Q ss_pred EeccCCceEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccc
Q psy12356 77 LRRKNQAHFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSK 149 (400)
Q Consensus 77 sp~~~~~~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~ 149 (400)
||-. .+.++++-.-+.|++|...+|. +..|+..|-.++|+|...++|||||.||+|+|||+|.+.- ..
T Consensus 220 Sp~~-~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~----~~ 294 (440)
T KOG0302|consen 220 SPIK-TGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPK----KA 294 (440)
T ss_pred cccc-ccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCc----cc
Confidence 9954 3467776566789999998876 2357788999999999889999999999999999999821 11
Q ss_pred eeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEE
Q psy12356 150 CLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISD 229 (400)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 229 (400)
|+..-. ..+..+-+.....-..+++|+.||+++|||+|+.+.. +++.. |.-|..+|++
T Consensus 295 ~~~~kA---------h~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~-~pVA~------------fk~Hk~pIts 352 (440)
T KOG0302|consen 295 AVSTKA---------HNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG-QPVAT------------FKYHKAPITS 352 (440)
T ss_pred eeEeec---------cCCceeeEEccCCcceeeecCCCceEEEEEhhhccCC-Cccee------------EEeccCCeeE
Confidence 211100 0000011111122234677889999999999986542 22222 4578899999
Q ss_pred EEECCC--CcEEEEecCCeEEEEeCCCC
Q psy12356 230 VKISNS--GRYMISRDYLCVKVWDLHME 255 (400)
Q Consensus 230 v~fSpd--g~~las~~D~tIklWD~~~~ 255 (400)
|+|+|. +.++|++.|.+|.|||+.-.
T Consensus 353 ieW~p~e~s~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 353 IEWHPHEDSVIAASGEDNQITIWDLSVE 380 (440)
T ss_pred EEeccccCceEEeccCCCcEEEEEeecc
Confidence 999995 33445678999999999864
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-19 Score=175.13 Aligned_cols=290 Identities=16% Similarity=0.228 Sum_probs=176.4
Q ss_pred EEEECCC---CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 8 ASQRFSD---GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 8 ~v~fspd---G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
++.|++- ...||.+..||.|.++|+...... .+...++.+..|..+ |.++.|.| + +.+
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr-----~ee~~lk~~~aH~nA------------ifDl~wap-g-e~~ 114 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFR-----LEERQLKKPLAHKNA------------IFDLKWAP-G-ESL 114 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcc-----hhhhhhcccccccce------------eEeeccCC-C-cee
Confidence 5677762 358999999999999998753211 011123456677654 89999999 4 346
Q ss_pred EEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc--cc--------ccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL--CD--------RHS 148 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~--~~--------~~~ 148 (400)
++++++|.|||+||++++.+ .+|...|.+++|+|.+...|++|+.||.|.|||+|-... .. +|+
T Consensus 115 lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n 194 (720)
T KOG0321|consen 115 LVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHN 194 (720)
T ss_pred EEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhcccc
Confidence 77789999999999987663 467888999999999999999999999999999987641 00 011
Q ss_pred c---eeccCc---------ccceeceeccCchhhhhhcccCcceeecCC-CCCeEEEeecccccccCcccccccCCCCCC
Q psy12356 149 K---CLIEGT---------NCNCQGLIVPESKREERQSSQNRREKEDNR-RKPAIRLCDMRAAALCDRHSKFFEEPEDPT 215 (400)
Q Consensus 149 ~---~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 215 (400)
. ....+. +..+.+. ..+....|...+++++ .|++||+||+|......+ ..|. +.
T Consensus 195 ~~ptpskp~~kr~~k~kA~s~ti~ss-------vTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r-----~ep~-~~ 261 (720)
T KOG0321|consen 195 TAPTPSKPLKKRIRKWKAASNTIFSS-------VTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYR-----QEPR-GS 261 (720)
T ss_pred CCCCCCchhhccccccccccCceeee-------eEEEEEeccceeeeccCCCcceEEEeecccccccc-----cCCC-cc
Confidence 1 000000 0001100 0000111221223322 699999999997433211 0010 00
Q ss_pred Cccccccc---ccCeEEEEECCCCcEEE-EecCCeEEEEeCCCC-CCceeeecCCC---------cCCCCccc-CCCCCc
Q psy12356 216 NKSFFSEI---ISSISDVKISNSGRYMI-SRDYLCVKVWDLHME-SRPVETYPTHT---------KEENGQLR-DPSNIT 280 (400)
Q Consensus 216 ~~~~~~~h---~~~V~~v~fSpdg~~la-s~~D~tIklWD~~~~-~~~l~~~~~h~---------~~~~g~~~-~~~~~~ 280 (400)
.. +..| .-.+.++.....|.+|. +..|++|..|++.+. ..|+..|.+|. .++++.++ +++.+.
T Consensus 262 ~~--~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~ 339 (720)
T KOG0321|consen 262 DK--YPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDE 339 (720)
T ss_pred cC--ccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCc
Confidence 00 1112 23466777777788875 567999999999875 34667776653 23455543 333333
Q ss_pred eeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEcc--CCCEEEEecCCeE
Q psy12356 281 ALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNS--DQETYLSADDLRI 358 (400)
Q Consensus 281 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fsp--Dg~~las~~D~~i 358 (400)
...+|.++.-+. . .....||+..|.+|+|.| ++..+.+++|.++
T Consensus 340 ~ayiw~vs~~e~-----------------------~-----------~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~ 385 (720)
T KOG0321|consen 340 QAYIWVVSSPEA-----------------------P-----------PALLLGHTREVTTVRWLPSATTPVATCSDDFRV 385 (720)
T ss_pred ceeeeeecCccC-----------------------C-----------hhhhhCcceEEEEEeeccccCCCceeeccCcce
Confidence 333332211100 0 011248888899998865 5564444589999
Q ss_pred EEEeCcc
Q psy12356 359 NLWHLEI 365 (400)
Q Consensus 359 ~lW~~~~ 365 (400)
+||++..
T Consensus 386 kiW~l~~ 392 (720)
T KOG0321|consen 386 KIWRLSN 392 (720)
T ss_pred EEEeccC
Confidence 9999843
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.9e-20 Score=168.23 Aligned_cols=193 Identities=42% Similarity=0.616 Sum_probs=133.7
Q ss_pred ccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCC
Q psy12356 109 EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKP 188 (400)
Q Consensus 109 ~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg 188 (400)
..|.+|.|.-.| ++||+|..+|.|-++.-.... ++.
T Consensus 26 diis~vef~~~G-e~LatGdkgGRVv~f~r~~~~------~~e------------------------------------- 61 (433)
T KOG1354|consen 26 DIISAVEFDHYG-ERLATGDKGGRVVLFEREKLY------KGE------------------------------------- 61 (433)
T ss_pred cceeeEEeeccc-ceEeecCCCCeEEEeeccccc------ccc-------------------------------------
Confidence 458899999875 799999999999887632220 000
Q ss_pred eEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc---EEEEecCCeEEEEeCCCCCCceeeecCC
Q psy12356 189 AIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR---YMISRDYLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 189 ~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~---~las~~D~tIklWD~~~~~~~l~~~~~h 265 (400)
-+. .+.- .-+.|++.+++++ +-...|+.++|-+++. +|++++|+|||+|.++...... .+-
T Consensus 62 -y~~---~t~f-------qshepEFDYLkSl--eieEKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~---~~~ 125 (433)
T KOG1354|consen 62 -YNF---QTEF-------QSHEPEFDYLKSL--EIEEKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKK---EGY 125 (433)
T ss_pred -eee---eeee-------eccCcccchhhhh--hhhhhhhhceecCCCCccEEEEecCCcceeeeeeecccccc---ccc
Confidence 000 0000 0123445555554 2235689999998876 6778999999999999754322 211
Q ss_pred CcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEcc
Q psy12356 266 TKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNS 345 (400)
Q Consensus 266 ~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fsp 345 (400)
.....+ .++..+++|+|.+.+-+..+.+ .+++++..+|+.-|++|+++.
T Consensus 126 ~~~~~~---~~~~~~~lr~p~~~~~~~~vea----------------------------~prRv~aNaHtyhiNSIS~Ns 174 (433)
T KOG1354|consen 126 NLPEEG---PPGTITSLRLPVEGRHDLEVEA----------------------------SPRRVYANAHTYHINSISVNS 174 (433)
T ss_pred cccccC---CCCccceeeceeeccccceeee----------------------------eeeeeccccceeEeeeeeecC
Confidence 111112 2355677777665444443333 444555566777788888889
Q ss_pred CCCEEEEecCCeEEEEeCccCCeeEEEEeecCCcccchhhhhhhhhh
Q psy12356 346 DQETYLSADDLRINLWHLEITDQSFNIVDIKPTNMEELNEVREIYYL 392 (400)
Q Consensus 346 Dg~~las~~D~~i~lW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (400)
|+++++|++|-.|.||+++...+||+|+|+||.|||||-|||+-|-|
T Consensus 175 D~Et~lSADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEF 221 (433)
T KOG1354|consen 175 DKETFLSADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEF 221 (433)
T ss_pred ccceEeeccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhcc
Confidence 99999999999999999999999999999999999999999998876
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-18 Score=148.86 Aligned_cols=206 Identities=20% Similarity=0.231 Sum_probs=139.9
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC-C
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN-Q 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~-~ 82 (400)
+.|+|++|||+|++||+||.|++|++--.+.... ...||.-++ .-|++.|..++|..+.. +
T Consensus 90 gsiyc~~ws~~geliatgsndk~ik~l~fn~dt~-------------~~~g~dle~-----nmhdgtirdl~fld~~~s~ 151 (350)
T KOG0641|consen 90 GSIYCTAWSPCGELIATGSNDKTIKVLPFNADTC-------------NATGHDLEF-----NMHDGTIRDLAFLDDPESG 151 (350)
T ss_pred ccEEEEEecCccCeEEecCCCceEEEEecccccc-------------cccCcceee-----eecCCceeeeEEecCCCcC
Confidence 6799999999999999999999999977654321 122332110 01236689999976643 3
Q ss_pred ceEEEe--eCCCeEEEEEccCCC----cccccccEEEE-EEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 83 AHFLLS--TNDQSFNIVDIKPTN----MEELNEVITAA-EFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 83 ~~~l~s--s~D~tI~lWd~~~~~----~~~~~~~V~sv-~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
+.++.+ ..|..|.+=|-..|+ +.+|++.|.++ .|+ +-+|++||.|.+||.||+|-+ .|+.++.
T Consensus 152 ~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilalyswn---~~m~~sgsqdktirfwdlrv~-------~~v~~l~ 221 (350)
T KOG0641|consen 152 GAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILALYSWN---GAMFASGSQDKTIRFWDLRVN-------SCVNTLD 221 (350)
T ss_pred ceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEEEEec---CcEEEccCCCceEEEEeeecc-------ceeeecc
Confidence 456654 357777777776665 35677777654 343 368999999999999999988 3444433
Q ss_pred ccc-eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 156 NCN-CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 156 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
+.. ..++.-+ ..-.+.--|.++..+++-.|..+.|||+|.+... +.| -.|+..|.+|+|||
T Consensus 222 ~~~~~~gless--avaav~vdpsgrll~sg~~dssc~lydirg~r~i----q~f------------~phsadir~vrfsp 283 (350)
T KOG0641|consen 222 NDFHDGGLESS--AVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMI----QRF------------HPHSADIRCVRFSP 283 (350)
T ss_pred CcccCCCcccc--eeEEEEECCCcceeeeccCCCceEEEEeeCCcee----eee------------CCCccceeEEEeCC
Confidence 210 0000000 0000111266778888889999999999976543 333 25778999999999
Q ss_pred CCcEEEEe-cCCeEEEEeCCCC
Q psy12356 235 SGRYMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 235 dg~~las~-~D~tIklWD~~~~ 255 (400)
.-.+|+++ -|..|||=|++..
T Consensus 284 ~a~yllt~syd~~ikltdlqgd 305 (350)
T KOG0641|consen 284 GAHYLLTCSYDMKIKLTDLQGD 305 (350)
T ss_pred CceEEEEecccceEEEeecccc
Confidence 99999975 5899999999853
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-18 Score=158.99 Aligned_cols=262 Identities=12% Similarity=0.152 Sum_probs=171.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+|+.+|+.+++|||+.|..-.||++.++. ....+.+|.. .|.++.|+.++.
T Consensus 65 ~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge-----------~~~eltgHKD------------SVt~~~Fshdgt-- 119 (399)
T KOG0296|consen 65 DSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE-----------FAGELTGHKD------------SVTCCSFSHDGT-- 119 (399)
T ss_pred CceEEEEeCCCCceEEecCCCceEEEEEccCCc-----------ceeEecCCCC------------ceEEEEEccCce--
Confidence 468999999999999999999999999998642 3446789984 499999998873
Q ss_pred eEEEeeCCCeEEEEEccCCCcc-cc---cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME-EL---NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~-~~---~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.++++.-+|.|+||+..++..+ .+ ...+.-+.|||. +.+|+.|+.||.+-+|.+-.+.++
T Consensus 120 lLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~-a~illAG~~DGsvWmw~ip~~~~~--------------- 183 (399)
T KOG0296|consen 120 LLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPR-AHILLAGSTDGSVWMWQIPSQALC--------------- 183 (399)
T ss_pred EEEecCCCccEEEEEcccCceEEEeecccCceEEEEeccc-ccEEEeecCCCcEEEEECCCccee---------------
Confidence 4445677999999999888632 11 234667899997 579999999999999998765211
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
+. +.||+.++++=.|.|||+.+
T Consensus 184 ----------------------------------------------kv------------~~Gh~~~ct~G~f~pdGKr~ 205 (399)
T KOG0296|consen 184 ----------------------------------------------KV------------MSGHNSPCTCGEFIPDGKRI 205 (399)
T ss_pred ----------------------------------------------eE------------ecCCCCCcccccccCCCceE
Confidence 11 23677889999999999999
Q ss_pred EEe-cCCeEEEEeCCCCCCceeeecCCCc--------CCCCccc-CCCCCceeecCcccccceee--ccCccceeccccc
Q psy12356 240 ISR-DYLCVKVWDLHMESRPVETYPTHTK--------EENGQLR-DPSNITALRVPQIKPIELTV--EASPRRIFANAHT 307 (400)
Q Consensus 240 as~-~D~tIklWD~~~~~~~l~~~~~h~~--------~~~g~~~-~~~~~~~i~l~~~~~~~~~~--~~~~~~~~~~~~~ 307 (400)
+++ .|++|++||.+++ .|+..+++-+. ..++..+ ..+.++.+.+-+-....... .+. .-.+..+++
T Consensus 206 ~tgy~dgti~~Wn~ktg-~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~-~~~l~~~~e 283 (399)
T KOG0296|consen 206 LTGYDDGTIIVWNPKTG-QPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGT-VPELKPSQE 283 (399)
T ss_pred EEEecCceEEEEecCCC-ceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCC-Cccccccch
Confidence 975 6899999999997 47777652211 0111111 11112211110000000000 000 000112344
Q ss_pred cceEEEEEcCCCcEE---eeccc--c--hh---------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 308 YHINSISVNSDQLTV---EASPR--G--IF---------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 308 ~~i~~i~~s~dg~~~---~~~~~--~--~~---------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
..+.++.+.|-...+ |-... + +| .--|...|.++-|-+ ..+|+++ .|++||.||..++.
T Consensus 284 ~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~ 359 (399)
T KOG0296|consen 284 ELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQ 359 (399)
T ss_pred hhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccc
Confidence 455666665544322 11110 0 11 125888999999999 6777775 79999999998765
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.6e-20 Score=175.85 Aligned_cols=204 Identities=16% Similarity=0.208 Sum_probs=134.2
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC-----cccc----cccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN-----MEEL----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~-----~~~~----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
..|.++++-|.|. +++++|.|.+|++||+..=. ++.+ ...|++++|+|.+ ..|+..+....++|.|-.
T Consensus 168 k~Vsal~~Dp~Ga--R~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg-~~iLvvsg~aqakl~DRd 244 (641)
T KOG0772|consen 168 KIVSALAVDPSGA--RFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTG-DQILVVSGSAQAKLLDRD 244 (641)
T ss_pred eEEEEeeecCCCc--eeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCC-CeEEEEecCcceeEEccC
Confidence 5589999988764 89999999999999997422 1222 3569999999986 566667777889999944
Q ss_pred cccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccc
Q psy12356 140 AAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSF 219 (400)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
.-.... |. .| |++++-+ ..
T Consensus 245 G~~~~e----~~-----------------------------------KG-------------DQYI~Dm---------~n 263 (641)
T KOG0772|consen 245 GFEIVE----FS-----------------------------------KG-------------DQYIRDM---------YN 263 (641)
T ss_pred Cceeee----ee-----------------------------------cc-------------chhhhhh---------hc
Confidence 331110 10 00 1111111 00
Q ss_pred ccccccCeEEEEECCCCc--EEEEecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccC
Q psy12356 220 FSEIISSISDVKISNSGR--YMISRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEAS 297 (400)
Q Consensus 220 ~~~h~~~V~~v~fSpdg~--~las~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~ 297 (400)
..||...+++.+|+|+.+ +|.++.|+++||||+.+....++.|..-. .
T Consensus 264 TKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~-----------------------------~- 313 (641)
T KOG0772|consen 264 TKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKP-----------------------------A- 313 (641)
T ss_pred cCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeecc-----------------------------C-
Confidence 238999999999999855 55567899999999998755555553110 0
Q ss_pred ccceeccccccceEEEEEcCCCcEEeecccc-----------------hhhccccc--ceeEEEEccCCCEEEE-ecCCe
Q psy12356 298 PRRIFANAHTYHINSISVNSDQLTVEASPRG-----------------IFADAHTY--HISSTSVNSDQETYLS-ADDLR 357 (400)
Q Consensus 298 ~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~-----------------~~~~gh~~--~V~~i~fspDg~~las-~~D~~ 357 (400)
.+-.-.+.+.+|+|||++||+++.. .+..+|.. .|+||+||+||++|+| +.|++
T Consensus 314 ------~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~t 387 (641)
T KOG0772|consen 314 ------GGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDT 387 (641)
T ss_pred ------CCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCc
Confidence 0000012334444444444443321 11247877 9999999999999999 57999
Q ss_pred EEEEeCccCCeeEEE
Q psy12356 358 INLWHLEITDQSFNI 372 (400)
Q Consensus 358 i~lW~~~~~~~~~~~ 372 (400)
+|+||+....+++.+
T Consensus 388 LKvWDLrq~kkpL~~ 402 (641)
T KOG0772|consen 388 LKVWDLRQFKKPLNV 402 (641)
T ss_pred eeeeeccccccchhh
Confidence 999999877666643
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-19 Score=178.19 Aligned_cols=204 Identities=11% Similarity=0.210 Sum_probs=138.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
-.++|+-.+|-..|+.++. ...+|+.++.... ..++...++.-.. ....++.|.|+. -.++.
T Consensus 41 ~~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~-------~~~~~~~~k~kqn---------~~~S~~DVkW~~-~~~Nl 102 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAGR-SLLKLYAINPNDF-------SEKCNHRFKTKQN---------KFYSAADVKWGQ-LYSNL 102 (839)
T ss_pred ccceEeecCCcceeEEecc-cceeeEeeCcccC-------Ccceeeecccccc---------eeeehhhccccc-chhhh
Confidence 3567888899999998874 4677887764321 1122112221111 012256788973 22456
Q ss_pred EEEeeCCCeEEEEEccC---CC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 85 FLLSTNDQSFNIVDIKP---TN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~---~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
+++++..|.|-+||+.. .. +.+|...++++.||+...++|+|||.||+||+||+|...-..++.. .+-
T Consensus 103 IAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~-----nSE 177 (839)
T KOG0269|consen 103 IATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRS-----NSE 177 (839)
T ss_pred heeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccc-----cch
Confidence 77889999999999976 22 3568889999999999999999999999999999998842211100 000
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
.+....++ .......+++.+.|.+++||+|+...+.. .+.+|.++|.++.|+|++.
T Consensus 178 SiRDV~fs---------p~~~~~F~s~~dsG~lqlWDlRqp~r~~~---------------k~~AH~GpV~c~nwhPnr~ 233 (839)
T KOG0269|consen 178 SIRDVKFS---------PGYGNKFASIHDSGYLQLWDLRQPDRCEK---------------KLTAHNGPVLCLNWHPNRE 233 (839)
T ss_pred hhhceeec---------cCCCceEEEecCCceEEEeeccCchhHHH---------------HhhcccCceEEEeecCCCc
Confidence 11111222 12233344555789999999998765421 1458999999999999999
Q ss_pred EEEEe-cCCeEEEEeCCCC
Q psy12356 238 YMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 238 ~las~-~D~tIklWD~~~~ 255 (400)
+||++ .|++|||||+.++
T Consensus 234 ~lATGGRDK~vkiWd~t~~ 252 (839)
T KOG0269|consen 234 WLATGGRDKMVKIWDMTDS 252 (839)
T ss_pred eeeecCCCccEEEEeccCC
Confidence 99986 5999999999864
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-20 Score=183.88 Aligned_cols=213 Identities=17% Similarity=0.297 Sum_probs=152.2
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.++..-..++.+++|+.|.++-||...+.- .+..|.+|+ ..|.+|.|++... .
T Consensus 30 av~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~-----------~i~S~~~he------------spIeSl~f~~~E~--L 84 (825)
T KOG0267|consen 30 AVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPN-----------AITSLTGHE------------SPIESLTFDTSER--L 84 (825)
T ss_pred hhceeeeeccceeeccCCCceeeccccccCCc-----------hhheeeccC------------CcceeeecCcchh--h
Confidence 45666666788999999999999999987532 223477887 4599999998752 4
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++++.||+||+||++.+. +-+|...+.+|.|||.+ .++|+++.|.-+++||.+.. +|...
T Consensus 85 laagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~-~~~a~gStdtd~~iwD~Rk~-------Gc~~~------- 149 (825)
T KOG0267|consen 85 LAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYG-EFFASGSTDTDLKIWDIRKK-------GCSHT------- 149 (825)
T ss_pred hcccccCCceeeeehhhhhhhhhhhccccCcceeeeccce-EEeccccccccceehhhhcc-------Cceee-------
Confidence 5567889999999998776 23566778999999985 68899999999999999865 22210
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
+.+|...|..++|+|+|++++
T Consensus 150 -----------------------------------------------------------~~s~~~vv~~l~lsP~Gr~v~ 170 (825)
T KOG0267|consen 150 -----------------------------------------------------------YKSHTRVVDVLRLSPDGRWVA 170 (825)
T ss_pred -----------------------------------------------------------ecCCcceeEEEeecCCCceee
Confidence 114667789999999999999
Q ss_pred Ee-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 241 SR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 241 s~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
++ +|.++||||...+ ..+.+|+.|+ ++|..-++ .++.+.++++|++...+.+..+. +-...|.
T Consensus 171 ~g~ed~tvki~d~~ag-k~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~-------~~~~~v~ 242 (825)
T KOG0267|consen 171 SGGEDNTVKIWDLTAG-KLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGK-------PETDGVR 242 (825)
T ss_pred ccCCcceeeeeccccc-ccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccC-------CccCCce
Confidence 75 5799999999876 4678888775 22222223 36788888888875554432221 1123355
Q ss_pred EEEEcCCCcEEee
Q psy12356 312 SISVNSDQLTVEA 324 (400)
Q Consensus 312 ~i~~s~dg~~~~~ 324 (400)
+..|+|||..+..
T Consensus 243 ~~~fn~~~~~~~~ 255 (825)
T KOG0267|consen 243 SLAFNPDGKIVLS 255 (825)
T ss_pred eeeecCCceeeec
Confidence 5556555555443
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-18 Score=157.69 Aligned_cols=113 Identities=15% Similarity=0.231 Sum_probs=92.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|++|+. +|.++||||.|-+|+|||+.... .+..+-.|+ +.|+++.|.+.-...
T Consensus 44 ~sitavAV--s~~~~aSGssDetI~IYDm~k~~-----------qlg~ll~Ha------------gsitaL~F~~~~S~s 98 (362)
T KOG0294|consen 44 GSITALAV--SGPYVASGSSDETIHIYDMRKRK-----------QLGILLSHA------------GSITALKFYPPLSKS 98 (362)
T ss_pred cceeEEEe--cceeEeccCCCCcEEEEeccchh-----------hhcceeccc------------cceEEEEecCCcchh
Confidence 56777775 58899999999999999997532 233555675 459999998875445
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
.+++++.||.|-+||..+=. ++.|.+.|+.++.||.+ .+-++.+.|+.+++||+.+|+
T Consensus 99 hLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~-KLALsVg~D~~lr~WNLV~Gr 160 (362)
T KOG0294|consen 99 HLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSG-KLALSVGGDQVLRTWNLVRGR 160 (362)
T ss_pred heeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCC-ceEEEEcCCceeeeehhhcCc
Confidence 89999999999999987543 56788889999999985 788899999999999998883
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.8e-20 Score=170.50 Aligned_cols=196 Identities=13% Similarity=0.178 Sum_probs=142.9
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+-|++++|.++++.+.+++.|+.+++|+++.. +.+++|.||+ ++|+++.|...+.
T Consensus 220 g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~-----------r~~~TLsGHt------------dkVt~ak~~~~~~-- 274 (459)
T KOG0288|consen 220 GNITSIDFDSDNKHVIAASNDKNLRLWNVDSL-----------RLRHTLSGHT------------DKVTAAKFKLSHS-- 274 (459)
T ss_pred CCcceeeecCCCceEEeecCCCceeeeeccch-----------hhhhhhcccc------------cceeeehhhcccc--
Confidence 34899999999999999999999999999853 4567899998 5699999976653
Q ss_pred eEEEeeCCCeEEEEEccCCCcc-c--ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc-ccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME-E--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT-NCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~-~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~-~~~~ 159 (400)
++++++.|.+||+||+.+..+. . ..+.+..|+.++ ..++|+-.|++||.||.|++.... ... +..+
T Consensus 275 ~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~---~~~~SgH~DkkvRfwD~Rs~~~~~-------sv~~gg~v 344 (459)
T KOG0288|consen 275 RVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSI---SDVISGHFDKKVRFWDIRSADKTR-------SVPLGGRV 344 (459)
T ss_pred ceeeccccchhhhhhhhhhheeccccccccccceEecc---eeeeecccccceEEEeccCCceee-------EeecCcce
Confidence 4777899999999999887652 2 234566777664 468899899999999999884221 111 0112
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+.+ +.++..+.+.++|.++++.|+|+...+ ..|..+++ ..+| ..+.+.|||++.|+
T Consensus 345 tSl~l----------s~~g~~lLsssRDdtl~viDlRt~eI~----~~~sA~g~------k~as--DwtrvvfSpd~~Yv 402 (459)
T KOG0288|consen 345 TSLDL----------SMDGLELLSSSRDDTLKVIDLRTKEIR----QTFSAEGF------KCAS--DWTRVVFSPDGSYV 402 (459)
T ss_pred eeEee----------ccCCeEEeeecCCCceeeeecccccEE----EEeecccc------cccc--ccceeEECCCCcee
Confidence 22222 245554455579999999999986543 22322211 1233 37889999999999
Q ss_pred EEe-cCCeEEEEeCCCCC
Q psy12356 240 ISR-DYLCVKVWDLHMES 256 (400)
Q Consensus 240 as~-~D~tIklWD~~~~~ 256 (400)
|++ .|+.|+||++.++.
T Consensus 403 aAGS~dgsv~iW~v~tgK 420 (459)
T KOG0288|consen 403 AAGSADGSVYIWSVFTGK 420 (459)
T ss_pred eeccCCCcEEEEEccCce
Confidence 975 69999999999874
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=168.70 Aligned_cols=201 Identities=10% Similarity=0.083 Sum_probs=128.3
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.+.|..+.||||.++|++|+.|..+++||+.++.. ++.+ +++- ...+.+++|.||+.
T Consensus 269 ~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~-----------~~~y-~~~~----------~~S~~sc~W~pDg~- 325 (519)
T KOG0293|consen 269 SQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDL-----------RHLY-PSGL----------GFSVSSCAWCPDGF- 325 (519)
T ss_pred cCceEEEEECCCCCeEEecCchHheeeccCCcchh-----------hhhc-ccCc----------CCCcceeEEccCCc-
Confidence 35688999999999999999999999999987541 1112 2210 12378999999986
Q ss_pred ceEEEeeCCCeEEEEEccCCCccccc----ccEEEEEEecCCC-------------------------------------
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNMEELN----EVITAAEFHPIDC------------------------------------- 121 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~~~~----~~V~sv~f~p~~~------------------------------------- 121 (400)
++++++.|++|..||++......+. ..|.+++..+||.
T Consensus 326 -~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS 404 (519)
T KOG0293|consen 326 -RFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSIS 404 (519)
T ss_pred -eeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEc
Confidence 7888999999999998765432221 2244444444432
Q ss_pred ---CEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccc
Q psy12356 122 ---NLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAA 198 (400)
Q Consensus 122 ---~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~ 198 (400)
.+++..-.+..+++||+....++++..++-.+. +.+ ...+.-.+...+++|+.|+.|+||+.+.+
T Consensus 405 ~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~-------fiI-----rSCFgg~~~~fiaSGSED~kvyIWhr~sg 472 (519)
T KOG0293|consen 405 KDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGH-------FII-----RSCFGGGNDKFIASGSEDSKVYIWHRISG 472 (519)
T ss_pred CCCcEEEEEcccCeeEEeecchhhHHHHhhcccccc-------eEE-----EeccCCCCcceEEecCCCceEEEEEccCC
Confidence 333444444555555555443332211110000 000 00011123345788999999999999987
Q ss_pred cccCcccccccCCCCCCCcccccccccCeEEEEECCCC-cEEEEe-cCCeEEEEeCCCC
Q psy12356 199 ALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG-RYMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg-~~las~-~D~tIklWD~~~~ 255 (400)
+.. ..++||...|++|+|+|.. .++||+ +|||||||-....
T Consensus 473 kll----------------~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 473 KLL----------------AVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred cee----------------EeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence 643 2256899999999999954 467774 6899999987643
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.8e-19 Score=162.59 Aligned_cols=227 Identities=16% Similarity=0.259 Sum_probs=157.6
Q ss_pred CceeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeee-ccCcchhhcccccccceeeEEEEEec
Q psy12356 1 MLVYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 1 ~~~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
|.-..|.|+.||-|...||+|+.||+|+||.+.+++ +++.|. +|+ ++|++++|+.|
T Consensus 261 Mmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~-----------ClRrFdrAHt------------kGvt~l~FSrD 317 (508)
T KOG0275|consen 261 MMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ-----------CLRRFDRAHT------------KGVTCLSFSRD 317 (508)
T ss_pred ecccceEEEeecccHHHhhccCcCCcEEEEEEecch-----------HHHHhhhhhc------------cCeeEEEEccC
Confidence 445679999999999999999999999999998753 466675 666 67999999998
Q ss_pred cCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 80 KNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 80 ~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
+. ++++++.|.++||--+++|+ +++|.+.|+.+.|.++| ..++++|+||+||+|+..+.. |+.+..
T Consensus 318 ~S--qiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG-~~iisaSsDgtvkvW~~Ktte-------C~~Tfk 387 (508)
T KOG0275|consen 318 NS--QILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDG-HHIISASSDGTVKVWHGKTTE-------CLSTFK 387 (508)
T ss_pred cc--hhhcccccceEEEeccccchhHHHhcCccccccceEEcCCC-CeEEEecCCccEEEecCcchh-------hhhhcc
Confidence 74 89999999999999999997 47889999999999985 789999999999999999884 433322
Q ss_pred c----cceecee-ccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEE
Q psy12356 156 N----CNCQGLI-VPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDV 230 (400)
Q Consensus 156 ~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 230 (400)
. ..+.++. ++ ..|.-+.++. +.+++.+-++.. +-.+.|..-.+ + .+..-++
T Consensus 388 ~~~~d~~vnsv~~~P--------Knpeh~iVCN--rsntv~imn~qG-----QvVrsfsSGkR--------E-gGdFi~~ 443 (508)
T KOG0275|consen 388 PLGTDYPVNSVILLP--------KNPEHFIVCN--RSNTVYIMNMQG-----QVVRSFSSGKR--------E-GGDFINA 443 (508)
T ss_pred CCCCcccceeEEEcC--------CCCceEEEEc--CCCeEEEEeccc-----eEEeeeccCCc--------c-CCceEEE
Confidence 1 0111111 11 1122223332 456666665542 11222311000 0 1344578
Q ss_pred EECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCc-ccCCCCCceeecC
Q psy12356 231 KISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQ-LRDPSNITALRVP 285 (400)
Q Consensus 231 ~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~-~~~~~~~~~i~l~ 285 (400)
..||.|.++.+ +.|+.+.-+.+.++. .-+++.-|+ ++|-.. +++-++++.++||
T Consensus 444 ~lSpkGewiYcigED~vlYCF~~~sG~-LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLW 506 (508)
T KOG0275|consen 444 ILSPKGEWIYCIGEDGVLYCFSVLSGK-LERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLW 506 (508)
T ss_pred EecCCCcEEEEEccCcEEEEEEeecCc-eeeeeecccccccccccCcccchhhhhcccchhhhc
Confidence 89999999986 689999999999874 345565554 223222 2334677777776
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-17 Score=156.67 Aligned_cols=258 Identities=10% Similarity=0.130 Sum_probs=152.4
Q ss_pred CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE-EEeeCCCe
Q psy12356 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF-LLSTNDQS 93 (400)
Q Consensus 15 G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~-l~ss~D~t 93 (400)
+++++|++.|++|++||+.++ ++++.+.+|. .+..++|+|++. .+ ++++.|+.
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~-----------~~~~~~~~~~-------------~~~~l~~~~dg~--~l~~~~~~~~~ 54 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATL-----------EVTRTFPVGQ-------------RPRGITLSKDGK--LLYVCASDSDT 54 (300)
T ss_pred CcEEEEecCCCEEEEEECCCC-----------ceEEEEECCC-------------CCCceEECCCCC--EEEEEECCCCe
Confidence 467899999999999998753 2345666553 256789999863 44 34567899
Q ss_pred EEEEEccCCCccc---ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhh
Q psy12356 94 FNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKRE 170 (400)
Q Consensus 94 I~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (400)
|++||..+++... ....+..++|+|++..++++++.|+.|++||++++..+..... ......
T Consensus 55 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~------~~~~~~--------- 119 (300)
T TIGR03866 55 IQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV------GVEPEG--------- 119 (300)
T ss_pred EEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC------CCCcce---------
Confidence 9999998876321 1223567899998754556666799999999988743221100 000111
Q ss_pred hhhcccCcceeecCCCC-CeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE-Ee-cCCeE
Q psy12356 171 ERQSSQNRREKEDNRRK-PAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI-SR-DYLCV 247 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~d-g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la-s~-~D~tI 247 (400)
+...+++...+.+..+ ..+..||.+++..... . ........++|+|+|++|+ ++ .++.|
T Consensus 120 -~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~----~-------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v 181 (300)
T TIGR03866 120 -MAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDN----V-------------LVDQRPRFAEFTADGKELWVSSEIGGTV 181 (300)
T ss_pred -EEECCCCCEEEEEecCCCeEEEEeCCCCeEEEE----E-------------EcCCCccEEEECCCCCEEEEEcCCCCEE
Confidence 2223555433333333 4677889876432110 0 0112346799999999885 44 48999
Q ss_pred EEEeCCCCCCceeeecCCCc-CCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEee--
Q psy12356 248 KVWDLHMESRPVETYPTHTK-EENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEA-- 324 (400)
Q Consensus 248 klWD~~~~~~~l~~~~~h~~-~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~-- 324 (400)
++||++++. +++.+..+.. ...+. . ....++|+|||+.+..
T Consensus 182 ~i~d~~~~~-~~~~~~~~~~~~~~~~---------~--------------------------~~~~i~~s~dg~~~~~~~ 225 (300)
T TIGR03866 182 SVIDVATRK-VIKKITFEIPGVHPEA---------V--------------------------QPVGIKLTKDGKTAFVAL 225 (300)
T ss_pred EEEEcCcce-eeeeeeeccccccccc---------C--------------------------CccceEECCCCCEEEEEc
Confidence 999999763 4454432210 00000 0 0011223333332110
Q ss_pred ccc-----------chh-hcccccceeEEEEccCCCEEEEe--cCCeEEEEeCccCC
Q psy12356 325 SPR-----------GIF-ADAHTYHISSTSVNSDQETYLSA--DDLRINLWHLEITD 367 (400)
Q Consensus 325 ~~~-----------~~~-~~gh~~~V~~i~fspDg~~las~--~D~~i~lW~~~~~~ 367 (400)
... +.. ...+...+.+++|+|||++|+++ .+++|++||+++.+
T Consensus 226 ~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 226 GPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK 282 (300)
T ss_pred CCCCeEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence 000 000 01234468899999999999875 48999999998754
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-18 Score=153.14 Aligned_cols=237 Identities=16% Similarity=0.257 Sum_probs=165.3
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
++|.+|+|+.+|. ++++++.|+++++|.++...+ ++|.+.|-.++|+|.+..+|++++.|.+|++||.|.++
T Consensus 21 ~~v~Sv~wn~~g~--~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k 98 (313)
T KOG1407|consen 21 QKVHSVAWNCDGT--KLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGK 98 (313)
T ss_pred hcceEEEEcccCc--eeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCc
Confidence 4589999999874 777889999999999987652 45777888999999999999999999999999999984
Q ss_pred ccccccceeccCcc--cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccc
Q psy12356 143 LCDRHSKCLIEGTN--CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFF 220 (400)
Q Consensus 143 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
|.....+ .++. +.-+|++...+.+..|..|...|.|+..... .+
T Consensus 99 -------~~~~i~~~~eni~-----------i~wsp~g~~~~~~~kdD~it~id~r~~~~~~----~~------------ 144 (313)
T KOG1407|consen 99 -------CTARIETKGENIN-----------ITWSPDGEYIAVGNKDDRITFIDARTYKIVN----EE------------ 144 (313)
T ss_pred -------EEEEeeccCcceE-----------EEEcCCCCEEEEecCcccEEEEEecccceee----hh------------
Confidence 3322211 1111 1123555555666789999999998754321 11
Q ss_pred cccccCeEEEEECCCCcEEE-EecCCeEEEEeCCCCCCceeeecCCC-------cCCCCcccC-CCCCceeecCcccccc
Q psy12356 221 SEIISSISDVKISNSGRYMI-SRDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLRD-PSNITALRVPQIKPIE 291 (400)
Q Consensus 221 ~~h~~~V~~v~fSpdg~~la-s~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~~-~~~~~~i~l~~~~~~~ 291 (400)
+....+..+.|+-++.+.. +.+-|+|.|-..-.- +|++.+++|. +.|+|++++ ++.|..+-||++..
T Consensus 145 -~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsL-kpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~E-- 220 (313)
T KOG1407|consen 145 -QFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSL-KPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDE-- 220 (313)
T ss_pred -cccceeeeeeecCCCCEEEEecCCceEEEEecccc-ccccccccCCcceEEEEECCCCceEeeccccceeeccChhH--
Confidence 1124577899987777654 567799999877643 5777787774 345555543 44555555554311
Q ss_pred eeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCeeE
Q psy12356 292 LTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQSF 370 (400)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~~~ 370 (400)
+ . |.+.+ ..|..+|..|+||.||++|||+ .|..|-|=+++++++++
T Consensus 221 L----------i----------------------C~R~i-sRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~ 267 (313)
T KOG1407|consen 221 L----------I----------------------CERCI-SRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVW 267 (313)
T ss_pred h----------h----------------------hheee-ccccCceEEEEeccCcceeeccCccceEEeEecccCCeEE
Confidence 0 0 11111 2578899999999999999997 69889888888888877
Q ss_pred EEEeecCC
Q psy12356 371 NIVDIKPT 378 (400)
Q Consensus 371 ~~~~~~~~ 378 (400)
+|--..|+
T Consensus 268 eI~~~~~t 275 (313)
T KOG1407|consen 268 EIPCEGPT 275 (313)
T ss_pred EeeccCCc
Confidence 77666655
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.2e-18 Score=167.43 Aligned_cols=311 Identities=15% Similarity=0.223 Sum_probs=188.9
Q ss_pred EEEEECC-CCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 7 EASQRFS-DGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 7 ~~v~fsp-dG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|+++.| .+. +||.|+.+..|.|+.-.. +.++....+.||+ .+|.+|+|...+.+..
T Consensus 149 LcL~~~~~~~~~lla~Ggs~~~v~~~s~~~---------d~f~~v~el~GH~------------DWIrsl~f~~~~~~~~ 207 (764)
T KOG1063|consen 149 LCLAALKNNKTFLLACGGSKFVVDLYSSSA---------DSFARVAELEGHT------------DWIRSLAFARLGGDDL 207 (764)
T ss_pred HHHhhhccCCcEEEEecCcceEEEEeccCC---------cceeEEEEeeccc------------hhhhhhhhhccCCCcE
Confidence 3566667 333 455667777888887553 2455667889998 4688888877664334
Q ss_pred EE-EeeCCCeEEEEEccCCC-----------------------------------cccccccEEEEEEecCCCCEEEEEe
Q psy12356 85 FL-LSTNDQSFNIVDIKPTN-----------------------------------MEELNEVITAAEFHPIDCNLFVYSS 128 (400)
Q Consensus 85 ~l-~ss~D~tI~lWd~~~~~-----------------------------------~~~~~~~V~sv~f~p~~~~~las~s 128 (400)
++ ++|.|..||||.+.-+. +.+|..-|.++.|+|.+ ..|+|+|
T Consensus 208 ~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~-~~LLSAS 286 (764)
T KOG1063|consen 208 LLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEG-LDLLSAS 286 (764)
T ss_pred EEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccch-hhheecc
Confidence 44 46789999999874321 01345569999999985 6789999
Q ss_pred CCCeEEEEeccccccccccccee--ccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccc
Q psy12356 129 SKGTIRLCDMRAAALCDRHSKCL--IEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSK 206 (400)
Q Consensus 129 ~Dg~i~lWD~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~ 206 (400)
.|.++.+|...+..-+=.-.-++ .+.....+++..+ ++++....+-+.-|..++|-......+
T Consensus 287 aDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw----------~~n~~~ii~~g~~Gg~hlWkt~d~~~w----- 351 (764)
T KOG1063|consen 287 ADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLW----------SPNSNVIIAHGRTGGFHLWKTKDKTFW----- 351 (764)
T ss_pred cCcceEEEecCCccceEEEEEEeecccccccceeeEEE----------cCCCCEEEEecccCcEEEEeccCccce-----
Confidence 99999999987762000000001 1111122333322 244444444457889999973322211
Q ss_pred cccCCCCCCCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCC-------C---------ceeeec-CCCc-
Q psy12356 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMES-------R---------PVETYP-THTK- 267 (400)
Q Consensus 207 ~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~-------~---------~l~~~~-~h~~- 267 (400)
....++.||...|.+|+|+|.|.+|++ +-|+|-||+---..+ + |+..++ .+.|
T Consensus 352 --------~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FV 423 (764)
T KOG1063|consen 352 --------TQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFV 423 (764)
T ss_pred --------eeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceee
Confidence 112447899999999999999999997 569999998654111 0 111111 0100
Q ss_pred ----------------------------------CCCCccc---CCCC---------Cc-----eeecC-cccccceee-
Q psy12356 268 ----------------------------------EENGQLR---DPSN---------IT-----ALRVP-QIKPIELTV- 294 (400)
Q Consensus 268 ----------------------------------~~~g~~~---~~~~---------~~-----~i~l~-~~~~~~~~~- 294 (400)
.|+|.-+ .-|+ .+ +.+.+ ...+-+++.
T Consensus 424 SgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~eP 503 (764)
T KOG1063|consen 424 SGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEP 503 (764)
T ss_pred ecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCC
Confidence 0111100 0000 00 00000 000000000
Q ss_pred --ccC---------ccceeccccccceEEEEEcCCCcEEeecccc---------hh----------hcccccceeEEEEc
Q psy12356 295 --EAS---------PRRIFANAHTYHINSISVNSDQLTVEASPRG---------IF----------ADAHTYHISSTSVN 344 (400)
Q Consensus 295 --~~~---------~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~---------~~----------~~gh~~~V~~i~fs 344 (400)
..+ -.+++ ||-+.|.+++.||+|+++|++|+- +| ..+|+-.|+.|+||
T Consensus 504 P~EdqLq~~tLwPEv~KLY--GHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FS 581 (764)
T KOG1063|consen 504 PTEDQLQQNTLWPEVHKLY--GHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFS 581 (764)
T ss_pred ChHHHHHHhccchhhHHhc--cCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEEC
Confidence 000 00111 799999999999999999987751 11 25999999999999
Q ss_pred cCCCEEEEe-cCCeEEEEeCc
Q psy12356 345 SDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 345 pDg~~las~-~D~~i~lW~~~ 364 (400)
|||++|+|. .|.++.||+.+
T Consensus 582 pdg~~LLsvsRDRt~sl~~~~ 602 (764)
T KOG1063|consen 582 PDGRYLLSVSRDRTVSLYEVQ 602 (764)
T ss_pred CCCcEEEEeecCceEEeeeee
Confidence 999999996 79999999874
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=172.08 Aligned_cols=214 Identities=16% Similarity=0.229 Sum_probs=159.7
Q ss_pred EEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE
Q psy12356 9 SQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL 87 (400)
Q Consensus 9 v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ 87 (400)
+.|-+ |+-+|++|++|++|-||.+... .++.+|.+|+.. |.++.-..+ ..+++
T Consensus 64 i~y~e~~~~~l~~g~~D~~i~v~~~~~~-----------~P~~~LkgH~sn------------VC~ls~~~~---~~~iS 117 (745)
T KOG0301|consen 64 ICYAESDKGRLVVGGMDTTIIVFKLSQA-----------EPLYTLKGHKSN------------VCSLSIGED---GTLIS 117 (745)
T ss_pred ceeccccCcceEeecccceEEEEecCCC-----------Cchhhhhccccc------------eeeeecCCc---CceEe
Confidence 67764 7778999999999999998753 356789999843 777765433 36889
Q ss_pred eeCCCeEEEEEccCC--CcccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceecc
Q psy12356 88 STNDQSFNIVDIKPT--NMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVP 165 (400)
Q Consensus 88 ss~D~tI~lWd~~~~--~~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (400)
+|.|.|+|+|.+..- .+++|+..|++|.+-|. +.++|||.|.+||+|.-.+- +
T Consensus 118 gSWD~TakvW~~~~l~~~l~gH~asVWAv~~l~e--~~~vTgsaDKtIklWk~~~~---------l-------------- 172 (745)
T KOG0301|consen 118 GSWDSTAKVWRIGELVYSLQGHTASVWAVASLPE--NTYVTGSADKTIKLWKGGTL---------L-------------- 172 (745)
T ss_pred cccccceEEecchhhhcccCCcchheeeeeecCC--CcEEeccCcceeeeccCCch---------h--------------
Confidence 999999999987542 26789999999999996 38999999999999985221 0
Q ss_pred CchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCC
Q psy12356 166 ESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYL 245 (400)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~ 245 (400)
++ |.+|+.-|..+++-|++.+|.+++|+
T Consensus 173 ----------------------------------------~t------------f~gHtD~VRgL~vl~~~~flScsNDg 200 (745)
T KOG0301|consen 173 ----------------------------------------KT------------FSGHTDCVRGLAVLDDSHFLSCSNDG 200 (745)
T ss_pred ----------------------------------------hh------------hccchhheeeeEEecCCCeEeecCCc
Confidence 11 34788899999999999999889999
Q ss_pred eEEEEeCCCCCCceeeecCCCc--------CCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcC
Q psy12356 246 CVKVWDLHMESRPVETYPTHTK--------EENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNS 317 (400)
Q Consensus 246 tIklWD~~~~~~~l~~~~~h~~--------~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~ 317 (400)
.||+||+.. .+|.++.||+. +.++.+++.++|+++|+|.-. .+.+.. .|+
T Consensus 201 ~Ir~w~~~g--e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--------e~~q~I--~lP---------- 258 (745)
T KOG0301|consen 201 SIRLWDLDG--EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--------ECVQVI--TLP---------- 258 (745)
T ss_pred eEEEEeccC--ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--------ceEEEE--ecC----------
Confidence 999999953 46788888862 345556778888899888531 111111 011
Q ss_pred CCcEEeecccchhhcccccceeEEEEccCCCEEEEecCCeEEEEeCc
Q psy12356 318 DQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSADDLRINLWHLE 364 (400)
Q Consensus 318 dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~ 364 (400)
+-.|.++.+=+.|..++.+.||.||||..+
T Consensus 259 -----------------ttsiWsa~~L~NgDIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 259 -----------------TTSIWSAKVLLNGDIVVGGSDGRVRVFTVD 288 (745)
T ss_pred -----------------ccceEEEEEeeCCCEEEeccCceEEEEEec
Confidence 224666777788886666789999999876
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.6e-18 Score=161.75 Aligned_cols=262 Identities=12% Similarity=0.182 Sum_probs=174.5
Q ss_pred hcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC---------cccccccEEEEEEecCCCCEEEEEeCCC
Q psy12356 61 YLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN---------MEELNEVITAAEFHPIDCNLFVYSSSKG 131 (400)
Q Consensus 61 ~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~---------~~~~~~~V~sv~f~p~~~~~las~s~Dg 131 (400)
.+..++|.+-|.++..|... +.+..+..+.|||||+.... +.+....|+++.+.||+ +.|+.|++-.
T Consensus 412 q~~tL~HGEvVcAvtIS~~t---rhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdg-rtLivGGeas 487 (705)
T KOG0639|consen 412 QINTLAHGEVVCAVTISNPT---RHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDG-RTLIVGGEAS 487 (705)
T ss_pred hhhhhccCcEEEEEEecCCc---ceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCC-ceEEeccccc
Confidence 34456666778888887654 55555667999999996432 12234679999999985 7889999999
Q ss_pred eEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCC
Q psy12356 132 TIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEP 211 (400)
Q Consensus 132 ~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~ 211 (400)
++.|||+......- +...+...-.++.+.++ ++.....+-+.||.|++||+++-.. ++.
T Consensus 488 tlsiWDLAapTpri---kaeltssapaCyALa~s----------pDakvcFsccsdGnI~vwDLhnq~~----Vrq---- 546 (705)
T KOG0639|consen 488 TLSIWDLAAPTPRI---KAELTSSAPACYALAIS----------PDAKVCFSCCSDGNIAVWDLHNQTL----VRQ---- 546 (705)
T ss_pred eeeeeeccCCCcch---hhhcCCcchhhhhhhcC----------CccceeeeeccCCcEEEEEccccee----eec----
Confidence 99999999874211 11111111233333333 5554444456799999999986432 111
Q ss_pred CCCCCcccccccccCeEEEEECCCCcEEEEec-CCeEEEEeCCCCCCcee-eecCC----CcCCCCcccC-CCCCceeec
Q psy12356 212 EDPTNKSFFSEIISSISDVKISNSGRYMISRD-YLCVKVWDLHMESRPVE-TYPTH----TKEENGQLRD-PSNITALRV 284 (400)
Q Consensus 212 ~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~-D~tIklWD~~~~~~~l~-~~~~h----~~~~~g~~~~-~~~~~~i~l 284 (400)
|.||+..+.||..|+||..|=+++ |++||-||++++.++++ .|.-. .+.|+|..++ +-+.+.+.
T Consensus 547 --------fqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~ve- 617 (705)
T KOG0639|consen 547 --------FQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVE- 617 (705)
T ss_pred --------ccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEE-
Confidence 458999999999999999998865 99999999998754322 11100 1346666543 22222221
Q ss_pred CcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccch-------------hhcccccceeEEEEccCCCEEE
Q psy12356 285 PQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGI-------------FADAHTYHISSTSVNSDQETYL 351 (400)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~-------------~~~gh~~~V~~i~fspDg~~la 351 (400)
.+-.....+-.+.-|+.-|.++.|.+.|+++++.++.. ++--...+|.++..|.|.++|+
T Consensus 618 -------vlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIV 690 (705)
T KOG0639|consen 618 -------VLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIV 690 (705)
T ss_pred -------EEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccCceEEE
Confidence 11112222333456888899999999999999876532 1223467899999999999999
Q ss_pred Ee-cCCeEEEEeC
Q psy12356 352 SA-DDLRINLWHL 363 (400)
Q Consensus 352 s~-~D~~i~lW~~ 363 (400)
++ +|....|+.+
T Consensus 691 TGSGdkkATVYeV 703 (705)
T KOG0639|consen 691 TGSGDKKATVYEV 703 (705)
T ss_pred ecCCCcceEEEEE
Confidence 97 7887777764
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=162.66 Aligned_cols=211 Identities=14% Similarity=0.192 Sum_probs=145.6
Q ss_pred EEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE
Q psy12356 8 ASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL 86 (400)
Q Consensus 8 ~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l 86 (400)
.+.|++ .--+|++|+.|++|.+||+...... .....+...|.+|+. .|+.|+|+|.+. ..|.
T Consensus 182 glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~----~~~~~p~~~~~~h~~------------~VeDV~~h~~h~-~lF~ 244 (422)
T KOG0264|consen 182 GLSWNRQQEGTLLSGSDDHTICLWDINAESKE----DKVVDPKTIFSGHED------------VVEDVAWHPLHE-DLFG 244 (422)
T ss_pred ccccccccceeEeeccCCCcEEEEeccccccC----CccccceEEeecCCc------------ceehhhccccch-hhhe
Confidence 577887 4458999999999999998754321 012234557788874 499999999864 4677
Q ss_pred EeeCCCeEEEEEccCC--C----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 87 LSTNDQSFNIVDIKPT--N----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 87 ~ss~D~tI~lWd~~~~--~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++.|+.+.|||++++ + .+.|.+.|++++|+|-+..+|||||.|++|.|||+|.-.. ++.+..
T Consensus 245 sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~------~lh~~e----- 313 (422)
T KOG0264|consen 245 SVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK------PLHTFE----- 313 (422)
T ss_pred eecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc------Cceecc-----
Confidence 7899999999999853 2 2356788999999999999999999999999999997632 222221
Q ss_pred ceeccCchhhhh---hcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 161 GLIVPESKREER---QSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 161 ~~~~~~~~~~~~---~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
++.+++ ..+|.. ...|+++.|+.+.+||+..-... +. -.......+.+.-.-.||+..|....|+|+-
T Consensus 314 ------~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~e-q~-~eda~dgppEllF~HgGH~~kV~DfsWnp~e 385 (422)
T KOG0264|consen 314 ------GHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEE-QS-PEDAEDGPPELLFIHGGHTAKVSDFSWNPNE 385 (422)
T ss_pred ------CCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccc-cC-hhhhccCCcceeEEecCcccccccccCCCCC
Confidence 122222 223433 45677779999999998642211 10 0000000011111134899999999999998
Q ss_pred cEEE-E-ecCCeEEEEeCCC
Q psy12356 237 RYMI-S-RDYLCVKVWDLHM 254 (400)
Q Consensus 237 ~~la-s-~~D~tIklWD~~~ 254 (400)
.+++ | ++|+.+.||+...
T Consensus 386 PW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 386 PWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred CeEEEEecCCceEEEeeccc
Confidence 8766 4 4789999999874
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-18 Score=163.12 Aligned_cols=220 Identities=15% Similarity=0.115 Sum_probs=154.1
Q ss_pred CceeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 1 MLVYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 1 ~~~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
|+-|.|.|++-+|+|.+|+.|...|.+++|.+.++ +++..+.+|-.. |+++.|+-|+
T Consensus 79 v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG-----------~LL~v~~aHYQ~------------ITcL~fs~dg 135 (476)
T KOG0646|consen 79 VLPGPVHALASSNLGYFLLAGTISGNLYLWELSSG-----------ILLNVLSAHYQS------------ITCLKFSDDG 135 (476)
T ss_pred ccccceeeeecCCCceEEEeecccCcEEEEEeccc-----------cHHHHHHhhccc------------eeEEEEeCCC
Confidence 45678999999999999999989999999999865 356778888644 9999999876
Q ss_pred CCceEEEeeCCCeEEEEEccC-------CC------cccccccEEEEEEecCC-CCEEEEEeCCCeEEEEeccccccccc
Q psy12356 81 NQAHFLLSTNDQSFNIVDIKP-------TN------MEELNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDR 146 (400)
Q Consensus 81 ~~~~~l~ss~D~tI~lWd~~~-------~~------~~~~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~ 146 (400)
. +++++|+||.|.+|.+.. +. +..|+-.|+++...+-+ .-+++|+|.|+++|+||+..+.++..
T Consensus 136 s--~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlt 213 (476)
T KOG0646|consen 136 S--HIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLT 213 (476)
T ss_pred c--EEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEE
Confidence 4 888999999999998742 11 23466678888776532 34789999999999999999976542
Q ss_pred ccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc-
Q psy12356 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS- 225 (400)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~- 225 (400)
.... ..+..+.+. |.......|+.+|.|.+-++.+..........-..+...+....+.||.+
T Consensus 214 i~fp------~si~av~lD----------pae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~ 277 (476)
T KOG0646|consen 214 ITFP------SSIKAVALD----------PAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENE 277 (476)
T ss_pred EecC------CcceeEEEc----------ccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCC
Confidence 1110 000011111 23333445668999988887654321110111111112222233678888
Q ss_pred -CeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 226 -SISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 226 -~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
.|++++.|-||.+|+++ .||.|+|||+... ++++++
T Consensus 278 ~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~-Q~iRtl 315 (476)
T KOG0646|consen 278 SAITCLAISTDGTLLLSGDEDGKVCVWDIYSK-QCIRTL 315 (476)
T ss_pred cceeEEEEecCccEEEeeCCCCCEEEEecchH-HHHHHH
Confidence 89999999999999987 5999999999975 467765
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-17 Score=168.43 Aligned_cols=249 Identities=10% Similarity=0.109 Sum_probs=171.1
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
-+.|.|.|+|++|.+|+.||.|++|+..... .++. ++..|+ +.|.+++-. .+++
T Consensus 16 ~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~---------e~P~-ti~~~g------------~~v~~ia~~----s~~f 69 (933)
T KOG1274|consen 16 LTLICYDPDGEFICTCGSDGDIRKWKTNSDE---------EEPE-TIDISG------------ELVSSIACY----SNHF 69 (933)
T ss_pred eEEEEEcCCCCEEEEecCCCceEEeecCCcc---------cCCc-hhhccC------------ceeEEEeec----ccce
Confidence 4678999999999999999999999976431 0010 111122 235555432 2489
Q ss_pred EEeeCCCeEEEEEccCCCcc----cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 86 LLSTNDQSFNIVDIKPTNME----ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~~----~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
++++.+++|.++.+..++.. ..+-+++.++|+.+| +++|.||+|-.||+-++.+....
T Consensus 70 ~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g-~~iaagsdD~~vK~~~~~D~s~~----------------- 131 (933)
T KOG1274|consen 70 LTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSG-KMIAAGSDDTAVKLLNLDDSSQE----------------- 131 (933)
T ss_pred EEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCC-cEEEeecCceeEEEEeccccchh-----------------
Confidence 99999999999999887743 235578999999975 78999999999999988766110
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las 241 (400)
+. +.+|.++|.+|.|+|++++||+
T Consensus 132 --------------------------------------------~~------------lrgh~apVl~l~~~p~~~fLAv 155 (933)
T KOG1274|consen 132 --------------------------------------------KV------------LRGHDAPVLQLSYDPKGNFLAV 155 (933)
T ss_pred --------------------------------------------ee------------ecccCCceeeeeEcCCCCEEEE
Confidence 00 2367889999999999999996
Q ss_pred -ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCC-
Q psy12356 242 -RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQ- 319 (400)
Q Consensus 242 -~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg- 319 (400)
+.||+|++||+.++ .+.+++.+-. ++ .+.. ....+..++|+|+|
T Consensus 156 ss~dG~v~iw~~~~~-~~~~tl~~v~--k~-------------------n~~~------------~s~i~~~~aW~Pk~g 201 (933)
T KOG1274|consen 156 SSCDGKVQIWDLQDG-ILSKTLTGVD--KD-------------------NEFI------------LSRICTRLAWHPKGG 201 (933)
T ss_pred EecCceEEEEEcccc-hhhhhcccCC--cc-------------------cccc------------ccceeeeeeecCCCC
Confidence 57999999999976 3444442210 00 0000 01123456677774
Q ss_pred cEEeeccc---ch-----h------h-cccccceeEEEEccCCCEEEEe-cCCeEEEEeCccC---CeeEEEEeecCCcc
Q psy12356 320 LTVEASPR---GI-----F------A-DAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEIT---DQSFNIVDIKPTNM 380 (400)
Q Consensus 320 ~~~~~~~~---~~-----~------~-~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~---~~~~~~~~~~~~~~ 380 (400)
++++.... +. | . .-|+..++.++|||.|+|||++ -||.|-|||+++- +..-.|+-++|.-+
T Consensus 202 ~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~~~~~~~Vc~~aw~p~ 281 (933)
T KOG1274|consen 202 TLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHERHEFKRAVCCEAWKPN 281 (933)
T ss_pred eEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchhccccceeEEEecCCC
Confidence 33332111 11 1 1 2344458999999999999998 5999999999842 22347888999888
Q ss_pred cchhhhhh
Q psy12356 381 EELNEVRE 388 (400)
Q Consensus 381 ~~~~~~~~ 388 (400)
+..+.+++
T Consensus 282 ~n~it~~~ 289 (933)
T KOG1274|consen 282 ANAITLIT 289 (933)
T ss_pred CCeeEEEe
Confidence 87777665
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=157.32 Aligned_cols=222 Identities=18% Similarity=0.251 Sum_probs=149.3
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC 144 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~ 144 (400)
.+|..|+--... ..+.+++.|.|.+||.+++|.| .+|.+.|+++.|||. +.+++++|.|++..||...-+-..
T Consensus 149 DGiW~Vaa~~tq--pi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s-~~L~lTaSGD~taHIW~~av~~~v 225 (481)
T KOG0300|consen 149 DGIWHVAADSTQ--PICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNS-GLLLLTASGDETAHIWKAAVNWEV 225 (481)
T ss_pred cceeeehhhcCC--cceeecccccceeEEeeccccceeeecccccceeeEEeccc-cceEEEccCCcchHHHHHhhcCcC
Confidence 457777654322 2444678899999999999984 578999999999997 489999999999999995433111
Q ss_pred ccccceeccCcccceeceeccCchhhhhhccc--CcceeecCCCC-CeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 145 DRHSKCLIEGTNCNCQGLIVPESKREERQSSQ--NRREKEDNRRK-PAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d-g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
..- .....+ +..++...+. +.....+-..| .+||+ | ...+.
T Consensus 226 P~~-~a~~~h------------SsEeE~e~sDe~~~d~d~~~~sD~~tiRv------------------P-----l~~lt 269 (481)
T KOG0300|consen 226 PSN-NAPSDH------------SSEEEEEHSDEHNRDTDSSEKSDGHTIRV------------------P-----LMRLT 269 (481)
T ss_pred CCC-CCCCCC------------CchhhhhcccccccccccccccCCceeee------------------e-----eeeee
Confidence 100 000000 0001111100 00000000001 12221 0 01156
Q ss_pred ccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccce
Q psy12356 222 EIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIEL 292 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~ 292 (400)
+|.+.|.++.|-..|+.+++ +.|.|..|||++++ .+++.+.||. .+|+.+++ .++.+++.|||+|-+
T Consensus 270 gH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtg-e~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe--- 345 (481)
T KOG0300|consen 270 GHRAVVSACDWLAGGQQMVTASWDRTANLWDVETG-EVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE--- 345 (481)
T ss_pred ccccceEehhhhcCcceeeeeeccccceeeeeccC-ceeccccCcchhccccccCCcceEEEEeccCceeEeccchh---
Confidence 89999999999999999987 57999999999997 4788899985 24666654 589999999999831
Q ss_pred eeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEE-ecCCeEEEEeCcc
Q psy12356 293 TVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLS-ADDLRINLWHLEI 365 (400)
Q Consensus 293 ~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las-~~D~~i~lW~~~~ 365 (400)
.|.++++. +||+..|+++.|.-|.+ ++| ++|.|||+||+..
T Consensus 346 ----------------aI~sV~VF---------------QGHtdtVTS~vF~~dd~-vVSgSDDrTvKvWdLrN 387 (481)
T KOG0300|consen 346 ----------------AIQSVAVF---------------QGHTDTVTSVVFNTDDR-VVSGSDDRTVKVWDLRN 387 (481)
T ss_pred ----------------hcceeeee---------------cccccceeEEEEecCCc-eeecCCCceEEEeeecc
Confidence 13344432 69999999999999988 556 4899999999854
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-17 Score=157.27 Aligned_cols=208 Identities=15% Similarity=0.153 Sum_probs=141.3
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+..|.+++.||||+|||+|+.|..|+||+.++. +.+++|.+|. +.|.+++|-...
T Consensus 202 ~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~-----------ehv~~~~ghr------------~~V~~L~fr~gt-- 256 (479)
T KOG0299|consen 202 VKEILTLAVSSDGKYLATGGRDRHVQIWDCDTL-----------EHVKVFKGHR------------GAVSSLAFRKGT-- 256 (479)
T ss_pred cceeEEEEEcCCCcEEEecCCCceEEEecCccc-----------chhhcccccc------------cceeeeeeecCc--
Confidence 346889999999999999999999999999863 3466788987 458999996433
Q ss_pred ceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEe-CCCeEEEEecccccccccccceeccCccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSS-SKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
..+.++|.|.+|++|+++.-. +.+|++.|.++.-... ...+|.+ .|+++++|++-....+- .+...+
T Consensus 257 ~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~r--eR~vtVGgrDrT~rlwKi~eesqli-----frg~~~- 328 (479)
T KOG0299|consen 257 SELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSR--ERCVTVGGRDRTVRLWKIPEESQLI-----FRGGEG- 328 (479)
T ss_pred cceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcc--cceEEeccccceeEEEeccccceee-----eeCCCC-
Confidence 378889999999999997654 4567888888766553 4567766 79999999995542210 000000
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccC-CC-CCCCcccccccccCeEEEEECCC
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEE-PE-DPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
..+.+.+ -+..-.++|+.+|.|.||++...+.. -+... |. .+.+.+ .++..+|++|+-.|.
T Consensus 329 ----------sidcv~~-In~~HfvsGSdnG~IaLWs~~KKkpl----f~~~~AHgv~~~~~~--~~~~~Witsla~i~~ 391 (479)
T KOG0299|consen 329 ----------SIDCVAF-INDEHFVSGSDNGSIALWSLLKKKPL----FTSRLAHGVIPELDP--VNGNFWITSLAVIPG 391 (479)
T ss_pred ----------CeeeEEE-ecccceeeccCCceEEEeeecccCce----eEeeccccccCCccc--cccccceeeeEeccc
Confidence 0001100 01122456788999999998764321 11111 11 010111 123359999999999
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCcee
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVE 260 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~ 260 (400)
..++|++ .+|.||||-+..+.+++.
T Consensus 392 sdL~asGS~~G~vrLW~i~~g~r~i~ 417 (479)
T KOG0299|consen 392 SDLLASGSWSGCVRLWKIEDGLRAIN 417 (479)
T ss_pred CceEEecCCCCceEEEEecCCccccc
Confidence 9999985 699999999998754443
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=145.98 Aligned_cols=200 Identities=17% Similarity=0.184 Sum_probs=148.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
++|..++.+.|...+|+|+.|+-|++||++++ +..+.|++|.+ .|+.|+|+.++.
T Consensus 60 ~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TG-----------kv~Rr~rgH~a------------qVNtV~fNeesS-- 114 (307)
T KOG0316|consen 60 HEVLDAALSSDNSKFASCGGDKAVQVWDVNTG-----------KVDRRFRGHLA------------QVNTVRFNEESS-- 114 (307)
T ss_pred ceeeeccccccccccccCCCCceEEEEEcccC-----------eeeeecccccc------------eeeEEEecCcce--
Confidence 68999999999999999999999999999964 46889999984 599999987653
Q ss_pred eEEEeeCCCeEEEEEccCCCccc------ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEE------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
.+++++.|.++|+||-++...+. ....|.++..+. ..|++||.||++|.+|+|.|.+.-. ..++
T Consensus 115 Vv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~---heIvaGS~DGtvRtydiR~G~l~sD-------y~g~ 184 (307)
T KOG0316|consen 115 VVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAE---HEIVAGSVDGTVRTYDIRKGTLSSD-------YFGH 184 (307)
T ss_pred EEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecc---cEEEeeccCCcEEEEEeecceeehh-------hcCC
Confidence 56677899999999998776433 235688888764 4689999999999999999954211 1111
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc--CeEEEEECCC
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS--SISDVKISNS 235 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~V~~v~fSpd 235 (400)
.+.. +.+++++.-+..++.|+++||-|-.++++.. .+ .||.+ .-..++|+..
T Consensus 185 pit~----------vs~s~d~nc~La~~l~stlrLlDk~tGklL~----sY------------kGhkn~eykldc~l~qs 238 (307)
T KOG0316|consen 185 PITS----------VSFSKDGNCSLASSLDSTLRLLDKETGKLLK----SY------------KGHKNMEYKLDCCLNQS 238 (307)
T ss_pred ccee----------EEecCCCCEEEEeeccceeeecccchhHHHH----Hh------------cccccceeeeeeeeccc
Confidence 1212 2233555555556789999999999887642 22 24443 2346778877
Q ss_pred CcEEEE-ecCCeEEEEeCCCCCCceeeecCC
Q psy12356 236 GRYMIS-RDYLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 236 g~~las-~~D~tIklWD~~~~~~~l~~~~~h 265 (400)
...+++ +.||.|.+||+..+. .+..++.|
T Consensus 239 dthV~sgSEDG~Vy~wdLvd~~-~~sk~~~~ 268 (307)
T KOG0316|consen 239 DTHVFSGSEDGKVYFWDLVDET-QISKLSVV 268 (307)
T ss_pred ceeEEeccCCceEEEEEeccce-eeeeeccC
Confidence 778887 479999999999864 45556544
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.6e-17 Score=147.54 Aligned_cols=244 Identities=15% Similarity=0.146 Sum_probs=160.2
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+|.|+|.++.|+.+|.||++++||+.... +...| .|+ ..+.+++|.++. +
T Consensus 15 ~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~-----------l~~~~-~~~------------~plL~c~F~d~~---~ 67 (323)
T KOG1036|consen 15 GISSVKFSPSSSDLLVSSWDGSLRLYDVPANS-----------LKLKF-KHG------------APLLDCAFADES---T 67 (323)
T ss_pred ceeeEEEcCcCCcEEEEeccCcEEEEeccchh-----------hhhhe-ecC------------CceeeeeccCCc---e
Confidence 48899999999999989999999999998532 11122 233 348889998754 7
Q ss_pred EEEeeCCCeEEEEEccCCC---cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 85 FLLSTNDQSFNIVDIKPTN---MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~---~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
+++++-|+.||..|+.++. +..|...|.++++.+- .+.+++||-|++|++||.|.......... ...++.
T Consensus 68 ~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~-~~~vIsgsWD~~ik~wD~R~~~~~~~~d~------~kkVy~ 140 (323)
T KOG1036|consen 68 IVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYE-VGCVISGSWDKTIKFWDPRNKVVVGTFDQ------GKKVYC 140 (323)
T ss_pred EEEeccCceEEEEEecCCcceeeccCCCceEEEEeecc-CCeEEEcccCccEEEEecccccccccccc------CceEEE
Confidence 8889999999999998876 4567889999999985 46899999999999999996422111000 000000
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc-EEE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR-YMI 240 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~-~la 240 (400)
. ....+.+.+ |+.|..+.+||+|..... .+..+ + .-...+.+|++-|++. +.+
T Consensus 141 ~----------~v~g~~LvV--g~~~r~v~iyDLRn~~~~---~q~re--------S---~lkyqtR~v~~~pn~eGy~~ 194 (323)
T KOG1036|consen 141 M----------DVSGNRLVV--GTSDRKVLIYDLRNLDEP---FQRRE--------S---SLKYQTRCVALVPNGEGYVV 194 (323)
T ss_pred E----------eccCCEEEE--eecCceEEEEEcccccch---hhhcc--------c---cceeEEEEEEEecCCCceEE
Confidence 0 111233333 346899999999975432 11110 0 1123588999999755 666
Q ss_pred EecCCeEEEEeCCCCC---CceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcC
Q psy12356 241 SRDYLCVKVWDLHMES---RPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNS 317 (400)
Q Consensus 241 s~~D~tIklWD~~~~~---~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~ 317 (400)
++-||-|-+=.+.... ..-..|+.| .. +.
T Consensus 195 sSieGRVavE~~d~s~~~~skkyaFkCH-----------------------------------------r~-------~~ 226 (323)
T KOG1036|consen 195 SSIEGRVAVEYFDDSEEAQSKKYAFKCH-----------------------------------------RL-------SE 226 (323)
T ss_pred EeecceEEEEccCCchHHhhhceeEEee-----------------------------------------ec-------cc
Confidence 7767766554333220 000112222 11 00
Q ss_pred CCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCe
Q psy12356 318 DQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQ 368 (400)
Q Consensus 318 dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~ 368 (400)
++. ---.+|++|+|+|=-++|||| .||.|.+||+...++
T Consensus 227 ~~~------------~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKr 266 (323)
T KOG1036|consen 227 KDT------------EIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKR 266 (323)
T ss_pred CCc------------eEEEEeceeEeccccceEEecCCCceEEEccCcchhh
Confidence 110 013479999999999999997 699999999987664
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.4e-17 Score=161.95 Aligned_cols=328 Identities=16% Similarity=0.214 Sum_probs=194.4
Q ss_pred eEEEEEECCCCCeEEEec--CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 5 MREASQRFSDGELLATGD--KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s--~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.+++|+|||+|+|+|+|- ..-.++||++.+.. ..+.|..|.. .|++++|+|.+
T Consensus 80 ~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~-----------vVAEfvdHKY------------~vtcvaFsp~~-- 134 (1080)
T KOG1408|consen 80 PLTCVAFSQNGRYVATGECGRTPASKVWSLAFHG-----------VVAEFVDHKY------------NVTCVAFSPGN-- 134 (1080)
T ss_pred ceeEEEEcCCCcEEEecccCCCccceeeeecccc-----------chhhhhhccc------------cceeeeecCCC--
Confidence 478999999999999974 67789999998642 4567888874 49999999965
Q ss_pred ceEEE--ee-CCCeEEEEEccCCC---cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc-------cccc--c
Q psy12356 83 AHFLL--ST-NDQSFNIVDIKPTN---MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA-------LCDR--H 147 (400)
Q Consensus 83 ~~~l~--ss-~D~tI~lWd~~~~~---~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~-------~~~~--~ 147 (400)
++++ ++ .|..|.+||.+.+. -......|..++|+.++ .+|++++. ..||+|.+..++ +..+ +
T Consensus 135 -kyvvSVGsQHDMIVnv~dWr~N~~~asnkiss~Vsav~fsEdg-SYfvT~gn-rHvk~wyl~~~~KykdpiPl~gRs~~ 211 (1080)
T KOG1408|consen 135 -KYVVSVGSQHDMIVNVNDWRVNSSGASNKISSVVSAVAFSEDG-SYFVTSGN-RHVKLWYLQIQSKYKDPIPLPGRSYF 211 (1080)
T ss_pred -cEEEeeccccceEEEhhhhhhcccccccccceeEEEEEEccCC-ceeeeeee-eeEEEEEeeccccccCCccccchhhh
Confidence 5555 33 49999999987543 12345779999999985 78888755 679999998874 1100 0
Q ss_pred ------c-----ceeccCcccc-----eeceeccCchhhhhhc------------ccCcceeecCCCCCeEEEeeccccc
Q psy12356 148 ------S-----KCLIEGTNCN-----CQGLIVPESKREERQS------------SQNRREKEDNRRKPAIRLCDMRAAA 199 (400)
Q Consensus 148 ------~-----~~~~~~~~~~-----~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~dg~i~lWD~~~~~ 199 (400)
+ .|-.+..... -++..+-.+.+.-+.. .-..+.++.|+.+|+|||++-.+-.
T Consensus 212 lg~lr~n~f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~r~I~cgCa~g~vrlFnp~tL~ 291 (1080)
T KOG1408|consen 212 LGNLRFNEFLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSSRLIACGCAKGMVRLFNPETLD 291 (1080)
T ss_pred ccccccchhhhhhhcCcccccceEEEecccceeeechhhhhhhhhhhhccccceeeeecceEEEeeccceeeecCcchhh
Confidence 0 0000000000 0011000000000000 0122335567889999999865521
Q ss_pred ccCcc---------cccccCCCCCCCcccccccc----cCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCcee--eec
Q psy12356 200 LCDRH---------SKFFEEPEDPTNKSFFSEII----SSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVE--TYP 263 (400)
Q Consensus 200 ~~~~~---------~~~~~~~~~~~~~~~~~~h~----~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~--~~~ 263 (400)
-.... +.....++. .+.+.. ...-.+.|+|....|.. -+|..+.|||++...++=+ .+-
T Consensus 292 y~~Tlpr~halg~d~a~~~q~~~-----~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~l 366 (1080)
T KOG1408|consen 292 YAGTLPRSHALGSDTANLSQPEP-----KNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSML 366 (1080)
T ss_pred hccccccccccccchhhcccccc-----cccccCcccCCceeEEEecCCCceEEEEEcCceEEEEeccccccccceeeee
Confidence 10000 000000110 011111 11236889998888886 5899999999998753211 111
Q ss_pred CCC-------------------cCCCCcccCCCCCceeecCcccc--ccee-----eccCccc-----------------
Q psy12356 264 THT-------------------KEENGQLRDPSNITALRVPQIKP--IELT-----VEASPRR----------------- 300 (400)
Q Consensus 264 ~h~-------------------~~~~g~~~~~~~~~~i~l~~~~~--~~~~-----~~~~~~~----------------- 300 (400)
-|+ -+|-|-+...+.|++||||++.. ...+ .++...+
T Consensus 367 yHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~ 446 (1080)
T KOG1408|consen 367 YHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAG 446 (1080)
T ss_pred eccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCC
Confidence 131 13445555568899999998643 0000 0000000
Q ss_pred ee------ccccccceEEEEEcCCCcEEeeccc----chh----------hcccccceeEEEEccC---CCEEEEe-cCC
Q psy12356 301 IF------ANAHTYHINSISVNSDQLTVEASPR----GIF----------ADAHTYHISSTSVNSD---QETYLSA-DDL 356 (400)
Q Consensus 301 ~~------~~~~~~~i~~i~~s~dg~~~~~~~~----~~~----------~~gh~~~V~~i~fspD---g~~las~-~D~ 356 (400)
++ .-+....+.++++||||+.||+... ++| -.+|...|.++.||.- .++|||+ .|.
T Consensus 447 ~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdR 526 (1080)
T KOG1408|consen 447 IFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDR 526 (1080)
T ss_pred cccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCc
Confidence 00 0023445888999999998886432 221 1488889999998763 4678886 588
Q ss_pred eEEEEeCcc
Q psy12356 357 RINLWHLEI 365 (400)
Q Consensus 357 ~i~lW~~~~ 365 (400)
-|.|+|+..
T Consensus 527 lIHV~Dv~r 535 (1080)
T KOG1408|consen 527 LIHVYDVKR 535 (1080)
T ss_pred eEEEEeccc
Confidence 899998764
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=163.60 Aligned_cols=240 Identities=18% Similarity=0.255 Sum_probs=172.6
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|++|+.||||++||+|..-|.++||++.+-+ ....+.+|+.+ |.++.|+...-..++
T Consensus 462 ~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~-----------~~~~~eAHesE------------ilcLeyS~p~~~~kL 518 (1080)
T KOG1408|consen 462 FRALAVSPDGQHLASGDRGGNLRVYDLQELE-----------YTCFMEAHESE------------ILCLEYSFPVLTNKL 518 (1080)
T ss_pred eEEEEECCCcceecccCccCceEEEEehhhh-----------hhhheecccce------------eEEEeecCchhhhHh
Confidence 7899999999999999999999999998532 23356778754 899999754322344
Q ss_pred E-EeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCC-CEEEEEeCCCeEEEEeccc----ccccccccceeccC
Q psy12356 86 L-LSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDC-NLFVYSSSKGTIRLCDMRA----AALCDRHSKCLIEG 154 (400)
Q Consensus 86 l-~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~-~~las~s~Dg~i~lWD~~~----~~~~~~~~~~~~~~ 154 (400)
| +++.|.-|.++|+.... +.+|...|++|.|...|. ...++++.|..|. +++.. +.+..++ ..++
T Consensus 519 LASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksim-Fr~~qk~~~g~~f~r~---t~t~ 594 (1080)
T KOG1408|consen 519 LASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIM-FRVNQKASSGRLFPRH---TQTL 594 (1080)
T ss_pred hhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhh-eehhccccCceecccc---cccc
Confidence 4 57899999999997643 356788999999987763 4579999999874 34333 2222111 1111
Q ss_pred cccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 155 TNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
.....+...+. |.....++++.|..|||||+..+++. +.|.+.. +|.+..-.|...|
T Consensus 595 ~ktTlYDm~Vd----------p~~k~v~t~cQDrnirif~i~sgKq~----k~FKgs~---------~~eG~lIKv~lDP 651 (1080)
T KOG1408|consen 595 SKTTLYDMAVD----------PTSKLVVTVCQDRNIRIFDIESGKQV----KSFKGSR---------DHEGDLIKVILDP 651 (1080)
T ss_pred ccceEEEeeeC----------CCcceEEEEecccceEEEecccccee----eeecccc---------cCCCceEEEEECC
Confidence 11223332222 34445677889999999999988753 4554322 4556667899999
Q ss_pred CCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEE
Q psy12356 235 SGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSI 313 (400)
Q Consensus 235 dg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 313 (400)
.|.|||++ .|+++.++|..++. |+..+-
T Consensus 652 SgiY~atScsdktl~~~Df~sgE-cvA~m~-------------------------------------------------- 680 (1080)
T KOG1408|consen 652 SGIYLATSCSDKTLCFVDFVSGE-CVAQMT-------------------------------------------------- 680 (1080)
T ss_pred CccEEEEeecCCceEEEEeccch-hhhhhc--------------------------------------------------
Confidence 99999975 89999999998763 443332
Q ss_pred EEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 314 SVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 314 ~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
||+..|+.+-|++|=+-|+|. +|+-|.||.+..
T Consensus 681 -------------------GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 681 -------------------GHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred -------------------CcchheeeeeecccchhheeecCCceEEEEECch
Confidence 566667789999999999996 799999999853
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.6e-17 Score=147.87 Aligned_cols=278 Identities=17% Similarity=0.229 Sum_probs=173.3
Q ss_pred EEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE
Q psy12356 7 EASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL 86 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l 86 (400)
.|+.||+-|.+||+|..||.|.|||+.+. .+.+.|.+|.. .|.+++||+|+. +++
T Consensus 27 ~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~-----------~iar~lsaH~~------------pi~sl~WS~dgr--~Ll 81 (405)
T KOG1273|consen 27 ECCQFSRWGDYLAVGCANGRVVIYDFDTF-----------RIARMLSAHVR------------PITSLCWSRDGR--KLL 81 (405)
T ss_pred ceEEeccCcceeeeeccCCcEEEEEcccc-----------chhhhhhcccc------------ceeEEEecCCCC--Eee
Confidence 58999999999999999999999999864 23456788874 499999999984 677
Q ss_pred EeeCCCeEEEEEccCCCc-c--cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceecee
Q psy12356 87 LSTNDQSFNIVDIKPTNM-E--ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLI 163 (400)
Q Consensus 87 ~ss~D~tI~lWd~~~~~~-~--~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
++|.|..|++||+..|.+ + ...++|+.++|||...+.++.+-.+..-.+-++..+.. .++..- ....+.
T Consensus 82 tsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h-----~~Lp~d---~d~dln 153 (405)
T KOG1273|consen 82 TSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH-----SVLPKD---DDGDLN 153 (405)
T ss_pred eecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCce-----eeccCC---Cccccc
Confidence 889999999999998884 2 24678999999998777766665555555555544311 011000 000000
Q ss_pred ccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-e
Q psy12356 164 VPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-R 242 (400)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~ 242 (400)
.+.+ ...+-+.+....+|...|.+-++|..+.++.. .+. + .....|.++.|+-.|+.++. +
T Consensus 154 ~sas---~~~fdr~g~yIitGtsKGkllv~~a~t~e~va----s~r----------i-ts~~~IK~I~~s~~g~~liiNt 215 (405)
T KOG1273|consen 154 SSAS---HGVFDRRGKYIITGTSKGKLLVYDAETLECVA----SFR----------I-TSVQAIKQIIVSRKGRFLIINT 215 (405)
T ss_pred cccc---cccccCCCCEEEEecCcceEEEEecchheeee----eee----------e-chheeeeEEEEeccCcEEEEec
Confidence 0000 00111233445566679999999988765421 110 0 01256889999999999885 7
Q ss_pred cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEE
Q psy12356 243 DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTV 322 (400)
Q Consensus 243 ~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~ 322 (400)
.|+.||.++++.-- ..=++.+-.+.-++ -++ + . ++ .| +.++||.||.++
T Consensus 216 sDRvIR~ye~~di~---~~~r~~e~e~~~K~-----------qDv------V---N-k~-~W------k~ccfs~dgeYv 264 (405)
T KOG1273|consen 216 SDRVIRTYEISDID---DEGRDGEVEPEHKL-----------QDV------V---N-KL-QW------KKCCFSGDGEYV 264 (405)
T ss_pred CCceEEEEehhhhc---ccCccCCcChhHHH-----------HHH------H---h-hh-hh------hheeecCCccEE
Confidence 89999999988321 00000000000000 000 0 0 00 01 355666666665
Q ss_pred eeccc----------------chhhcccc-cceeEEEEccCCCEEEEecCCeEEEEeCccCC
Q psy12356 323 EASPR----------------GIFADAHT-YHISSTSVNSDQETYLSADDLRINLWHLEITD 367 (400)
Q Consensus 323 ~~~~~----------------~~~~~gh~-~~V~~i~fspDg~~las~~D~~i~lW~~~~~~ 367 (400)
.++.. +++ +|.. -....|.|.|-...|+|-+.|+|++|.....+
T Consensus 265 ~a~s~~aHaLYIWE~~~GsLVKIL-hG~kgE~l~DV~whp~rp~i~si~sg~v~iw~~~~~e 325 (405)
T KOG1273|consen 265 CAGSARAHALYIWEKSIGSLVKIL-HGTKGEELLDVNWHPVRPIIASIASGVVYIWAVVQVE 325 (405)
T ss_pred EeccccceeEEEEecCCcceeeee-cCCchhheeecccccceeeeeeccCCceEEEEeeccc
Confidence 43322 111 2333 34557889999999999888899999976543
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.7e-17 Score=146.05 Aligned_cols=249 Identities=15% Similarity=0.233 Sum_probs=164.0
Q ss_pred eeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
|.|.++.|-| |--...|+|.|.+++|||+++.+. .-.|. -+++|.+-+|+|-...
T Consensus 102 y~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~-----------a~~F~-------------me~~VYshamSp~a~s 157 (397)
T KOG4283|consen 102 YAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQE-----------AVDFK-------------MEGKVYSHAMSPMAMS 157 (397)
T ss_pred eeeeeeEEeeecCceeecccccceEEEeeccccee-----------eEEee-------------cCceeehhhcChhhhc
Confidence 8899999999 777888999999999999986431 11222 1245777778886532
Q ss_pred -ceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 83 -AHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 83 -~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
+.++++..|-.|||=|+++|.+ .+|.+.|.+|+|+|.....|++||.||.||+||+|... .|++.+.+
T Consensus 158 HcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRras------gcf~~lD~- 230 (397)
T KOG4283|consen 158 HCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRAS------GCFRVLDQ- 230 (397)
T ss_pred ceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeeccc------ceeEEeec-
Confidence 3455567899999999999974 67888999999999988889999999999999999862 34433221
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
.+++-. |.++. -..|.+.|+.++|+.||+
T Consensus 231 --------------------------------------hn~k~~------------p~~~~-n~ah~gkvngla~tSd~~ 259 (397)
T KOG4283|consen 231 --------------------------------------HNTKRP------------PILKT-NTAHYGKVNGLAWTSDAR 259 (397)
T ss_pred --------------------------------------ccCccC------------ccccc-cccccceeeeeeecccch
Confidence 111000 00110 126788999999999999
Q ss_pred EEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEc
Q psy12356 238 YMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVN 316 (400)
Q Consensus 238 ~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s 316 (400)
++++ +.|..+|+|+...+...++.|-.- ..+.+. +---.++ .+|.. -+.+-
T Consensus 260 ~l~~~gtd~r~r~wn~~~G~ntl~~~g~~--~~n~~~---~~~~~~~--------------------~~~s~---vfv~~ 311 (397)
T KOG4283|consen 260 YLASCGTDDRIRVWNMESGRNTLREFGPI--IHNQTT---SFAVHIQ--------------------SMDSD---VFVLF 311 (397)
T ss_pred hhhhccCccceEEeecccCcccccccccc--cccccc---cceEEEe--------------------ecccc---eEEEE
Confidence 9997 678999999999986656555210 000000 0000000 00000 01111
Q ss_pred CCC-cE-Ee----ecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 317 SDQ-LT-VE----ASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 317 ~dg-~~-~~----~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
|.+ .+ +. .+..+.+ .+|...|++.+|-||=+...++ .|+.|..|-.
T Consensus 312 p~~~~lall~~~sgs~ir~l-~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 312 PNDGSLALLNLLEGSFVRRL-STHLKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred ecCCeEEEEEccCceEEEee-ecccceeeEEeecCchhhhhccccCCccccccc
Confidence 111 11 10 0111122 4789999999999999999998 5999999965
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.4e-17 Score=161.05 Aligned_cols=196 Identities=16% Similarity=0.224 Sum_probs=146.1
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
...|-+++|+ +..+.+|+.|+.|..+|+...+ ....++++|.. .|..++|++|+.
T Consensus 260 ~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~----------~~~~~~~~H~q------------eVCgLkws~d~~- 314 (484)
T KOG0305|consen 260 ASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQ----------HVVSTLQGHRQ------------EVCGLKWSPDGN- 314 (484)
T ss_pred CceeEEEecc--CceEEEecCCCcEEEEEEecch----------hhhhhhhcccc------------eeeeeEECCCCC-
Confidence 3578899999 7789999999999999987542 11224778874 499999999985
Q ss_pred ceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeC--CCeEEEEecccccccccccceeccCc-
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSS--KGTIRLCDMRAAALCDRHSKCLIEGT- 155 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~--Dg~i~lWD~~~~~~~~~~~~~~~~~~- 155 (400)
+++++++|+.+.|||..... +.+|.+.|.+++|+|-...+||+|+. |++|++||+.++..++ ...
T Consensus 315 -~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~-------~vdt 386 (484)
T KOG0305|consen 315 -QLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARID-------SVDT 386 (484)
T ss_pred -eeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEec-------cccc
Confidence 77778999999999994433 35788899999999998899999864 9999999999984332 211
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
+..+.++..+... .-..+.-|-.++.|.||+.-+.+.. ..+.+|+..|..+++|||
T Consensus 387 gsQVcsL~Wsk~~--------kEi~sthG~s~n~i~lw~~ps~~~~----------------~~l~gH~~RVl~la~SPd 442 (484)
T KOG0305|consen 387 GSQVCSLIWSKKY--------KELLSTHGYSENQITLWKYPSMKLV----------------AELLGHTSRVLYLALSPD 442 (484)
T ss_pred CCceeeEEEcCCC--------CEEEEecCCCCCcEEEEecccccee----------------eeecCCcceeEEEEECCC
Confidence 1223333333111 1123334556789999998763321 114589999999999999
Q ss_pred CcEEEE-ecCCeEEEEeCCCC
Q psy12356 236 GRYMIS-RDYLCVKVWDLHME 255 (400)
Q Consensus 236 g~~las-~~D~tIklWD~~~~ 255 (400)
|..+++ +.|.|+|+|++...
T Consensus 443 g~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 443 GETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CCEEEEecccCcEEeccccCC
Confidence 999997 47999999999874
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.6e-16 Score=148.20 Aligned_cols=200 Identities=16% Similarity=0.175 Sum_probs=138.4
Q ss_pred eeeEEEEEECCCC--CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 3 VYMREASQRFSDG--ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 3 ~~~v~~v~fspdG--~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
.++|.+++|.|.- ++||+|+.-|.|-+||+.+.+ +.+. -...|..|. ..|.++.|+|..
T Consensus 186 ~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~----~d~d---~v~~f~~hs------------~~Vs~l~F~P~n 246 (498)
T KOG4328|consen 186 DRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQE----KDKD---GVYLFTPHS------------GPVSGLKFSPAN 246 (498)
T ss_pred ccceEEEEecccCcceEEEEccCCCcEEEEecCCCC----CccC---ceEEeccCC------------ccccceEecCCC
Confidence 3679999999954 699999999999999995322 1111 123566776 459999999975
Q ss_pred CCceEEEeeCCCeEEEEEccCCCccc------ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc----cccccce
Q psy12356 81 NQAHFLLSTNDQSFNIVDIKPTNMEE------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL----CDRHSKC 150 (400)
Q Consensus 81 ~~~~~l~ss~D~tI~lWd~~~~~~~~------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~----~~~~~~~ 150 (400)
..+++++|.||+||+-|++++..+. ....+.++.|+.... .++.+..=|...+||+|++.- ++-|...
T Consensus 247 -~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~-~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kK 324 (498)
T KOG4328|consen 247 -TSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESR-SVLFGDNVGNFNVIDLRTDGSEYENLRLHKKK 324 (498)
T ss_pred -hhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCc-cEEEeecccceEEEEeecCCccchhhhhhhcc
Confidence 4689999999999999998876432 223467888988754 556666656899999999842 1111111
Q ss_pred eccCcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEE
Q psy12356 151 LIEGTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISD 229 (400)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 229 (400)
+ ..+...|.. ...++++.|++.+|||+|+-..... |.+- ...|...|.+
T Consensus 325 I------------------~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s----------p~ls--t~~HrrsV~s 374 (498)
T KOG4328|consen 325 I------------------TSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS----------PFLS--TLPHRRSVNS 374 (498)
T ss_pred c------------------ceeecCCCCchheeecccCcceeeeehhhhcCCCC----------ccee--cccccceeee
Confidence 1 111222322 2366778999999999996432110 1111 1368889999
Q ss_pred EEECCCCcEEEE-ecCCeEEEEeCC
Q psy12356 230 VKISNSGRYMIS-RDYLCVKVWDLH 253 (400)
Q Consensus 230 v~fSpdg~~las-~~D~tIklWD~~ 253 (400)
+.|||.|-.|++ +-|..|||||..
T Consensus 375 AyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 375 AYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred eEEcCCCCceEeeccCCceEEeecc
Confidence 999998776876 469999999995
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=151.46 Aligned_cols=262 Identities=17% Similarity=0.229 Sum_probs=176.5
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC---cccc---cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN---MEEL---NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~---~~~~---~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
..|++|.|+|..+ .+++++.|++++|+.++... ++.+ ..+|.+.+|+|+|...+++++....+..||+.+++
T Consensus 214 ~~I~sv~FHp~~p--lllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak 291 (514)
T KOG2055|consen 214 GGITSVQFHPTAP--LLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK 291 (514)
T ss_pred CCceEEEecCCCc--eEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence 4699999999875 67789999999999997643 1111 34688999999986689999999999999999885
Q ss_pred ccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccc
Q psy12356 143 LCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222 (400)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
..+-+ ...+.....+..+.+ ++++..++..+..|.|.|--..++.... .+ .
T Consensus 292 ~~k~~--~~~g~e~~~~e~FeV----------Shd~~fia~~G~~G~I~lLhakT~eli~----s~-------------K 342 (514)
T KOG2055|consen 292 VTKLK--PPYGVEEKSMERFEV----------SHDSNFIAIAGNNGHIHLLHAKTKELIT----SF-------------K 342 (514)
T ss_pred ccccc--CCCCcccchhheeEe----------cCCCCeEEEcccCceEEeehhhhhhhhh----ee-------------e
Confidence 42210 011111001111111 2455556666678888887766654321 11 1
Q ss_pred cccCeEEEEECCCCcEEE-EecCCeEEEEeCCCCCCceeeecC----CC----cCCCCcccC-CCCCceeecCcccccce
Q psy12356 223 IISSISDVKISNSGRYMI-SRDYLCVKVWDLHMESRPVETYPT----HT----KEENGQLRD-PSNITALRVPQIKPIEL 292 (400)
Q Consensus 223 h~~~V~~v~fSpdg~~la-s~~D~tIklWD~~~~~~~l~~~~~----h~----~~~~g~~~~-~~~~~~i~l~~~~~~~~ 292 (400)
-.+.|..+.|+.||+.|. ++++|.|.+||++.. .+++.|.- |. .+++|.|++ ++..+.|.+.+.. ..
T Consensus 343 ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~-~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~--s~ 419 (514)
T KOG2055|consen 343 IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQN-SCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGN--SC 419 (514)
T ss_pred eccEEeeEEEecCCcEEEEEcCCceEEEEecCCc-ceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccc--hh
Confidence 236799999999999876 568999999999986 57777641 21 247888865 6677788765532 12
Q ss_pred eeccCcccee-ccccccceEEEEEcCCCcEEeeccc------c--------hhh-----cccccceeEEEEccCCCEEEE
Q psy12356 293 TVEASPRRIF-ANAHTYHINSISVNSDQLTVEASPR------G--------IFA-----DAHTYHISSTSVNSDQETYLS 352 (400)
Q Consensus 293 ~~~~~~~~~~-~~~~~~~i~~i~~s~dg~~~~~~~~------~--------~~~-----~gh~~~V~~i~fspDg~~las 352 (400)
...+.++-+. ...-+..|++++|+||+++||..+. + ++. .+.-+.|.|++|||.|-+||-
T Consensus 420 ~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAv 499 (514)
T KOG2055|consen 420 FASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAV 499 (514)
T ss_pred hccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEe
Confidence 2223332221 1234556999999999999874321 1 111 133457999999999999999
Q ss_pred e-cCCeEEEEeCc
Q psy12356 353 A-DDLRINLWHLE 364 (400)
Q Consensus 353 ~-~D~~i~lW~~~ 364 (400)
+ .++.+.||.+.
T Consensus 500 GNe~grv~l~kL~ 512 (514)
T KOG2055|consen 500 GNEAGRVHLFKLH 512 (514)
T ss_pred ecCCCceeeEeec
Confidence 9 68999999874
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.1e-17 Score=157.78 Aligned_cols=304 Identities=13% Similarity=0.159 Sum_probs=189.4
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEE-EeccCCce
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW-LRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~-sp~~~~~~ 84 (400)
|+.+..--+|+.|+|||.|-+|++|+...+. .-+.++++.|..- |.+|++ -++. ..
T Consensus 76 VNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~---------~~c~stir~H~DY------------Vkcla~~ak~~--~l 132 (735)
T KOG0308|consen 76 VNDIILCGNGKTLISASSDTTVKVWNAHKDN---------TFCMSTIRTHKDY------------VKCLAYIAKNN--EL 132 (735)
T ss_pred HhhHHhhcCCCceEEecCCceEEEeecccCc---------chhHhhhhcccch------------heeeeecccCc--ee
Confidence 3445555689999999999999999987531 1135677788732 777887 3333 25
Q ss_pred EEEeeCCCeEEEEEccCCC--c-------------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc---cc
Q psy12356 85 FLLSTNDQSFNIVDIKPTN--M-------------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC---DR 146 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~--~-------------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~---~~ 146 (400)
+++++-|+.|.|||+.++. + .++...|.+++-+|.+ .+|++|+..+-+++||.++++-+ ++
T Consensus 133 vaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~-t~ivsGgtek~lr~wDprt~~kimkLrG 211 (735)
T KOG0308|consen 133 VASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTG-TIIVSGGTEKDLRLWDPRTCKKIMKLRG 211 (735)
T ss_pred EEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcc-eEEEecCcccceEEeccccccceeeeec
Confidence 6667789999999998762 1 1234579999999975 79999999999999999998421 12
Q ss_pred ccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccC
Q psy12356 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISS 226 (400)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 226 (400)
|.. ++..+.+ .+++....+++.||+|||||+++-.+.. + +..|...
T Consensus 212 HTd--------NVr~ll~----------~dDGt~~ls~sSDgtIrlWdLgqQrCl~----T------------~~vH~e~ 257 (735)
T KOG0308|consen 212 HTD--------NVRVLLV----------NDDGTRLLSASSDGTIRLWDLGQQRCLA----T------------YIVHKEG 257 (735)
T ss_pred ccc--------ceEEEEE----------cCCCCeEeecCCCceEEeeeccccceee----e------------EEeccCc
Confidence 221 1112222 3566666777889999999999755421 1 2357778
Q ss_pred eEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecC--C--C--cC-CCCcccCCCCCceeecCcccccceeeccCc
Q psy12356 227 ISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPT--H--T--KE-ENGQLRDPSNITALRVPQIKPIELTVEASP 298 (400)
Q Consensus 227 V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~--h--~--~~-~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~ 298 (400)
|.++.-+|+-..+.++ .|+.|..=|+++...+...|+. | . .. .+..+-.+..+++|+-|-..+...+..++.
T Consensus 258 VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~ 337 (735)
T KOG0308|consen 258 VWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGD 337 (735)
T ss_pred eEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCccccccccCCC
Confidence 9999999999998876 5899999999986444334431 1 0 00 111111234455666664433221111110
Q ss_pred cceeccccccceEEEEEcCCCcEEeec----ccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCeeEEEE
Q psy12356 299 RRIFANAHTYHINSISVNSDQLTVEAS----PRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQSFNIV 373 (400)
Q Consensus 299 ~~~~~~~~~~~i~~i~~s~dg~~~~~~----~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~~~~~~ 373 (400)
... ++.|+..-+-. +..+. +| ...|...+.-.|-+.+++- .+|.+.+||+-. |.++=
T Consensus 338 -----------~~~--~~T~~~~~~~~~~~tp~~vi-~G-g~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~---~~~~~ 399 (735)
T KOG0308|consen 338 -----------LDF--FSTDSNNHSCDLTNTPDSVI-PG-GAAIKKHAMLNDKRHVLTKDAKGNVALWDILA---CVKVE 399 (735)
T ss_pred -----------CCc--ccccCCCccccccCCCceec-cC-chhhhhhhhhcCcceEeeecCCCCEEEEEeee---eeehh
Confidence 000 11111100000 00011 12 2346667777899999997 488999999864 44555
Q ss_pred eecCCcccchhh
Q psy12356 374 DIKPTNMEELNE 385 (400)
Q Consensus 374 ~~~~~~~~~~~~ 385 (400)
++.-.-+||.++
T Consensus 400 d~gk~~FE~iv~ 411 (735)
T KOG0308|consen 400 DFGKVDFEEIVK 411 (735)
T ss_pred hcccccHHHHHH
Confidence 566556666554
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=149.85 Aligned_cols=202 Identities=15% Similarity=0.289 Sum_probs=139.4
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+-.|+++.|.|-...|+||+.|++|++||..+.. ..+..+.|+.. +.|.+|.|+|.|.
T Consensus 172 ~devn~l~FHPre~ILiS~srD~tvKlFDfsK~s--------aKrA~K~~qd~-------------~~vrsiSfHPsGe- 229 (430)
T KOG0640|consen 172 VDEVNDLDFHPRETILISGSRDNTVKLFDFSKTS--------AKRAFKVFQDT-------------EPVRSISFHPSGE- 229 (430)
T ss_pred cCcccceeecchhheEEeccCCCeEEEEecccHH--------HHHHHHHhhcc-------------ceeeeEeecCCCc-
Confidence 3468999999999999999999999999987532 11112233322 4589999999874
Q ss_pred ceEEEeeCCCeEEEEEccCCCc-------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNM-------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~-------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.++++....++||+|+.+.++ ..|++.|++|.+++.+ ++.+++|.||-|||||--++ +|+.+..
T Consensus 230 -fllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~-~lYvTaSkDG~IklwDGVS~-------rCv~t~~ 300 (430)
T KOG0640|consen 230 -FLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTG-SLYVTASKDGAIKLWDGVSN-------RCVRTIG 300 (430)
T ss_pred -eEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCc-cEEEEeccCCcEEeeccccH-------HHHHHHH
Confidence 555677789999999998774 3577889999999984 89999999999999997777 3444432
Q ss_pred c----cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEE
Q psy12356 156 N----CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVK 231 (400)
Q Consensus 156 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 231 (400)
. ..+-+..| ..++..+.+.+.|.+++||.+.++.+. +.+.+... ++.+.--+...
T Consensus 301 ~AH~gsevcSa~F----------tkn~kyiLsSG~DS~vkLWEi~t~R~l----~~YtGAg~-------tgrq~~rtqAv 359 (430)
T KOG0640|consen 301 NAHGGSEVCSAVF----------TKNGKYILSSGKDSTVKLWEISTGRML----KEYTGAGT-------TGRQKHRTQAV 359 (430)
T ss_pred hhcCCceeeeEEE----------ccCCeEEeecCCcceeeeeeecCCceE----EEEecCCc-------ccchhhhhhhh
Confidence 1 11122222 234555556678999999999887553 33333210 01111123355
Q ss_pred ECCCCcEEEEec--CCeEEEEeCCCCC
Q psy12356 232 ISNSGRYMISRD--YLCVKVWDLHMES 256 (400)
Q Consensus 232 fSpdg~~las~~--D~tIklWD~~~~~ 256 (400)
|+....+++.-+ .+.+.-||.++..
T Consensus 360 FNhtEdyVl~pDEas~slcsWdaRtad 386 (430)
T KOG0640|consen 360 FNHTEDYVLFPDEASNSLCSWDARTAD 386 (430)
T ss_pred hcCccceEEccccccCceeeccccchh
Confidence 777777776543 3678889999864
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.6e-18 Score=169.25 Aligned_cols=183 Identities=14% Similarity=0.222 Sum_probs=140.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
-|.+|.|+++..+||.|+.+|+|++||+++. +.++++.||... +.+|.|+|.+. .
T Consensus 72 pIeSl~f~~~E~LlaagsasgtiK~wDleeA-----------k~vrtLtgh~~~------------~~sv~f~P~~~--~ 126 (825)
T KOG0267|consen 72 PIESLTFDTSERLLAAGSASGTIKVWDLEEA-----------KIVRTLTGHLLN------------ITSVDFHPYGE--F 126 (825)
T ss_pred cceeeecCcchhhhcccccCCceeeeehhhh-----------hhhhhhhccccC------------cceeeeccceE--E
Confidence 4889999999999999999999999999853 456789999854 78899999873 4
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
++.++.|..+++||++... ...|...|..+.|+|+| ..++++++|.+++|||+..|+++..++.+.. .+.
T Consensus 127 ~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~G-r~v~~g~ed~tvki~d~~agk~~~ef~~~e~-----~v~ 200 (825)
T KOG0267|consen 127 FASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDG-RWVASGGEDNTVKIWDLTAGKLSKEFKSHEG-----KVQ 200 (825)
T ss_pred eccccccccceehhhhccCceeeecCCcceeEEEeecCCC-ceeeccCCcceeeeecccccccccccccccc-----ccc
Confidence 5557889999999998543 34577789999999985 7899999999999999999977654432210 011
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
. +.+.+...+.+.|+.|+++++||+++....... + .....|.+++|+|+|+.++
T Consensus 201 s----------le~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~------------~----~~~~~v~~~~fn~~~~~~~ 254 (825)
T KOG0267|consen 201 S----------LEFHPLEVLLAPGSSDRTVRFWDLETFEVISSG------------K----PETDGVRSLAFNPDGKIVL 254 (825)
T ss_pred c----------cccCchhhhhccCCCCceeeeeccceeEEeecc------------C----CccCCceeeeecCCceeee
Confidence 1 112344456777889999999999987654321 0 1136799999999999998
Q ss_pred EecC
Q psy12356 241 SRDY 244 (400)
Q Consensus 241 s~~D 244 (400)
++..
T Consensus 255 ~G~q 258 (825)
T KOG0267|consen 255 SGEQ 258 (825)
T ss_pred cCch
Confidence 8753
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.7e-17 Score=163.12 Aligned_cols=203 Identities=16% Similarity=0.180 Sum_probs=141.4
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
++.|..++||.++ +|.|+|+|+|||||++.. ..++++|+ |. .-|+||+|+|-. +
T Consensus 369 t~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~-----------~~CL~~F~-Hn------------dfVTcVaFnPvD-D 422 (712)
T KOG0283|consen 369 TADILDLSWSKNN-FLLSSSMDKTVRLWHPGR-----------KECLKVFS-HN------------DFVTCVAFNPVD-D 422 (712)
T ss_pred chhheecccccCC-eeEeccccccEEeecCCC-----------cceeeEEe-cC------------CeeEEEEecccC-C
Confidence 4678899999776 889999999999999863 24577775 54 459999999964 5
Q ss_pred ceEEEeeCCCeEEEEEccCCCccc---ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccC---cc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEG---TN 156 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~---~~ 156 (400)
..|++||=|+-||||.+...+... ....|++++|.|+| +..+.|+.+|.+++++++..++.....-+.... .+
T Consensus 423 ryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdG-k~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~ 501 (712)
T KOG0283|consen 423 RYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDG-KGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQG 501 (712)
T ss_pred CcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCC-ceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccC
Confidence 678888999999999998777433 34679999999985 788999999999999998876532211011100 01
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
..+.++.+.++. ++. ..+ .+.|..|||+|.++.++. ..|.++. ..+.-....|++||
T Consensus 502 ~rITG~Q~~p~~-------~~~-vLV-TSnDSrIRI~d~~~~~lv----~KfKG~~----------n~~SQ~~Asfs~Dg 558 (712)
T KOG0283|consen 502 KRITGLQFFPGD-------PDE-VLV-TSNDSRIRIYDGRDKDLV----HKFKGFR----------NTSSQISASFSSDG 558 (712)
T ss_pred ceeeeeEecCCC-------CCe-EEE-ecCCCceEEEeccchhhh----hhhcccc----------cCCcceeeeEccCC
Confidence 123343333211 221 222 357999999999875543 2232211 01233468899999
Q ss_pred cEEEEe-cCCeEEEEeCCCC
Q psy12356 237 RYMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 237 ~~las~-~D~tIklWD~~~~ 255 (400)
++|+++ +|.-|.||+....
T Consensus 559 k~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 559 KHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred CEEEEeecCceEEEEeCCCC
Confidence 999974 7899999998543
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.4e-16 Score=153.96 Aligned_cols=293 Identities=14% Similarity=0.165 Sum_probs=171.0
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeee--eccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTF--QSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~--~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
|++|.|+|++..|.|+|.|.++.||...+.. |-....-.+ .++++ .+....-|+|+++
T Consensus 270 V~sv~W~p~~~~LLSASaDksmiiW~pd~~t-------GiWv~~vRlGe~gg~a-----------~GF~g~lw~~n~~-- 329 (764)
T KOG1063|consen 270 VYSVWWHPEGLDLLSASADKSMIIWKPDENT-------GIWVDVVRLGEVGGSA-----------GGFWGGLWSPNSN-- 329 (764)
T ss_pred eEEEEEccchhhheecccCcceEEEecCCcc-------ceEEEEEEeecccccc-----------cceeeEEEcCCCC--
Confidence 7899999999999999999999999977532 111110011 12332 3467788999874
Q ss_pred eEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc---------cccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL---------CDRH 147 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~---------~~~~ 147 (400)
.+++.+.-|-.++|..+... ..+|...|.+|+|+|.| .+|+|.|.|.|-||+-.-..+. ++++
T Consensus 330 ~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psG-eflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGy 408 (764)
T KOG1063|consen 330 VIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSG-EFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGY 408 (764)
T ss_pred EEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCC-CEEEEeccccceeeecccccccceeeecccccccc
Confidence 67777889999999843321 24677889999999985 7999999999999986542111 1110
Q ss_pred c-ceeccCcccceeceeccCchhhhh-------------------------hcccCcceeec-CCCCCeEEEeecccccc
Q psy12356 148 S-KCLIEGTNCNCQGLIVPESKREER-------------------------QSSQNRREKED-NRRKPAIRLCDMRAAAL 200 (400)
Q Consensus 148 ~-~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~-~~~dg~i~lWD~~~~~~ 200 (400)
. .|+..... .+.|-.+..+.+ ...|++..... |-....+..=+..++..
T Consensus 409 Dl~c~~~vn~----~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~ 484 (764)
T KOG1063|consen 409 DLTCLSFVNE----DLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGE 484 (764)
T ss_pred cceeeehccC----CceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccc
Confidence 0 11111110 111110000000 00111100000 00000000001111111
Q ss_pred ---------cCcccccccCCCCCCCc--------ccccccccCeEEEEECCCCcEEEEec------CCeEEEEeCCCCCC
Q psy12356 201 ---------CDRHSKFFEEPEDPTNK--------SFFSEIISSISDVKISNSGRYMISRD------YLCVKVWDLHMESR 257 (400)
Q Consensus 201 ---------~~~~~~~~~~~~~~~~~--------~~~~~h~~~V~~v~fSpdg~~las~~------D~tIklWD~~~~~~ 257 (400)
...+...++.|-.+.++ ..+-||..+|.+++.||+|+++||+. -..|+||...+..
T Consensus 485 ~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~- 563 (764)
T KOG1063|consen 485 AAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWL- 563 (764)
T ss_pred cceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchh-
Confidence 01111111211111111 11458999999999999999999753 2468899888653
Q ss_pred ceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccc-h-------
Q psy12356 258 PVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRG-I------- 329 (400)
Q Consensus 258 ~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~-~------- 329 (400)
..+.+. +|+..|+.+.|||||++|.+.++. .
T Consensus 564 ~~~~L~-----------------------------------------~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~ 602 (764)
T KOG1063|consen 564 QVQELE-----------------------------------------GHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQ 602 (764)
T ss_pred hhheec-----------------------------------------ccceEEEEEEECCCCcEEEEeecCceEEeeeee
Confidence 223333 455567777777777776654431 1
Q ss_pred --------h--hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 330 --------F--ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 330 --------~--~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
+ ...|+..|..+.|+||++++||+ .|++|++|....
T Consensus 603 ~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~ 649 (764)
T KOG1063|consen 603 EDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPD 649 (764)
T ss_pred cccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccC
Confidence 0 24799999999999999999997 799999998764
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.2e-16 Score=140.78 Aligned_cols=203 Identities=14% Similarity=0.202 Sum_probs=136.8
Q ss_pred eeEEEEEECCCCCeEEEecC--CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSDGELLATGDK--GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
|=|..+.|-...+.+..++. |.+||.-++.+ .+.++-|.||. ..|++|+-+|-++
T Consensus 57 yG~~~~~Fth~~~~~i~sStk~d~tIryLsl~d-----------NkylRYF~GH~------------~~V~sL~~sP~~d 113 (311)
T KOG1446|consen 57 YGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHD-----------NKYLRYFPGHK------------KRVNSLSVSPKDD 113 (311)
T ss_pred ccccEEEEecCCceEEEccCCCCCceEEEEeec-----------CceEEEcCCCC------------ceEEEEEecCCCC
Confidence 45677889776666766766 89999999985 35789999998 4699999999753
Q ss_pred CceEEEeeCCCeEEEEEccCCCccccc--ccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccc-eeccCcccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTNMEELN--EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSK-CLIEGTNCN 158 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~~~~~~--~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~-~~~~~~~~~ 158 (400)
.++++|.|++||+||++..++++.. ..-..++|+|.| -+||.+...+.|+|+|+|.-.--. +.. .+.....+.
T Consensus 114 --~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~G-LifA~~~~~~~IkLyD~Rs~dkgP-F~tf~i~~~~~~e 189 (311)
T KOG1446|consen 114 --TFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEG-LIFALANGSELIKLYDLRSFDKGP-FTTFSITDNDEAE 189 (311)
T ss_pred --eEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCC-cEEEEecCCCeEEEEEecccCCCC-ceeEccCCCCccc
Confidence 8999999999999999976654421 112346899985 788888887799999998752100 000 010000111
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
... +.++++|....-.+..+.+.+-|.=.|... ..|..+..+ ..--.+..|+|||++
T Consensus 190 w~~----------l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~----~tfs~~~~~---------~~~~~~a~ftPds~F 246 (311)
T KOG1446|consen 190 WTD----------LEFSPDGKSILLSTNASFIYLLDAFDGTVK----STFSGYPNA---------GNLPLSATFTPDSKF 246 (311)
T ss_pred eee----------eEEcCCCCEEEEEeCCCcEEEEEccCCcEe----eeEeeccCC---------CCcceeEEECCCCcE
Confidence 112 334577755444446778888887665432 233222110 011257899999999
Q ss_pred EEEe-cCCeEEEEeCCCCC
Q psy12356 239 MISR-DYLCVKVWDLHMES 256 (400)
Q Consensus 239 las~-~D~tIklWD~~~~~ 256 (400)
+.++ +|++|.+|+++++.
T Consensus 247 vl~gs~dg~i~vw~~~tg~ 265 (311)
T KOG1446|consen 247 VLSGSDDGTIHVWNLETGK 265 (311)
T ss_pred EEEecCCCcEEEEEcCCCc
Confidence 9975 67999999998864
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-15 Score=153.37 Aligned_cols=327 Identities=16% Similarity=0.183 Sum_probs=188.9
Q ss_pred EEEEEECCCC--CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 6 REASQRFSDG--ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 6 v~~v~fspdG--~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
|+++ ++|+= +.|+.|+.+|.++|||+.++ +.+.+|++|. ..|+++.=+|--.
T Consensus 162 Ital-~HP~TYLNKIvvGs~~G~lql~Nvrt~-----------K~v~~f~~~~------------s~IT~ieqsPaLD-- 215 (910)
T KOG1539|consen 162 ITAL-LHPSTYLNKIVVGSSQGRLQLWNVRTG-----------KVVYTFQEFF------------SRITAIEQSPALD-- 215 (910)
T ss_pred eeeE-ecchhheeeEEEeecCCcEEEEEeccC-----------cEEEEecccc------------cceeEeccCCcce--
Confidence 4444 45543 46788999999999999864 4678899886 3588888777532
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc----cccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD----RHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~----~~~~~~~~~~ 155 (400)
.++.+..+|+|.|.+++.++. +...+.|++++|..||.-++|+|...|.+-+||+...++.. .|...+.+..
T Consensus 216 VVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~ 295 (910)
T KOG1539|consen 216 VVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGAT 295 (910)
T ss_pred EEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccce
Confidence 566788999999999998872 32358899999999988888999899999999999886532 1211111111
Q ss_pred ccceeceeccCchhhh----hhcccCc-----------------ce-ee-------cCCCCCeEEEeeccccccc---Cc
Q psy12356 156 NCNCQGLIVPESKREE----RQSSQNR-----------------RE-KE-------DNRRKPAIRLCDMRAAALC---DR 203 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~----~~~~~~~-----------------~~-~~-------~~~~dg~i~lWD~~~~~~~---~~ 203 (400)
.++-..+.+..++++. ++..+++ .. .+ +++.|.+.|.+++.+-.+. .+
T Consensus 296 fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~ 375 (910)
T KOG1539|consen 296 FLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQ 375 (910)
T ss_pred ecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcc
Confidence 0111111111111000 0001111 01 11 1235555555544321100 00
Q ss_pred --------ccccc-----cCCC---------------------------------CCCC-ccc-----ccccccCeEEEE
Q psy12356 204 --------HSKFF-----EEPE---------------------------------DPTN-KSF-----FSEIISSISDVK 231 (400)
Q Consensus 204 --------~~~~~-----~~~~---------------------------------~~~~-~~~-----~~~h~~~V~~v~ 231 (400)
....+ ..|+ .... +.. +......+.+|+
T Consensus 376 ~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~ 455 (910)
T KOG1539|consen 376 LHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVC 455 (910)
T ss_pred cccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEE
Confidence 00000 0000 0000 000 001124688999
Q ss_pred ECCCCcEEEE-ecCCeEEEEeCCCCCCceeee---cCCCcC--------CCCcccCCCCCceeecCcccccceeeccCcc
Q psy12356 232 ISNSGRYMIS-RDYLCVKVWDLHMESRPVETY---PTHTKE--------ENGQLRDPSNITALRVPQIKPIELTVEASPR 299 (400)
Q Consensus 232 fSpdg~~las-~~D~tIklWD~~~~~~~l~~~---~~h~~~--------~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~ 299 (400)
.|+.|++..- .+.|+|.+++++.+- ..+.| .+|.-. .+-.+++++.++-++.|+|...... ++
T Consensus 456 vs~CGNF~~IG~S~G~Id~fNmQSGi-~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~--~~-- 530 (910)
T KOG1539|consen 456 VSFCGNFVFIGYSKGTIDRFNMQSGI-HRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLK--KS-- 530 (910)
T ss_pred EeccCceEEEeccCCeEEEEEcccCe-eecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCccee--ee--
Confidence 9999998764 567999999999873 33556 355421 1222457788899999998644321 11
Q ss_pred ceeccccccceEEEEEcCCCcEEeeccc------------chh--hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 300 RIFANAHTYHINSISVNSDQLTVEASPR------------GIF--ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 300 ~~~~~~~~~~i~~i~~s~dg~~~~~~~~------------~~~--~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
+..++ .+..+...-...+++..+. ++. -.||++.|+.++|||||++|+++ .|++||+||+.
T Consensus 531 --l~l~~--~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlp 606 (910)
T KOG1539|consen 531 --LRLGS--SITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLP 606 (910)
T ss_pred --eccCC--CcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEecc
Confidence 00111 1222322222222222221 111 15999999999999999999997 59999999998
Q ss_pred cCC
Q psy12356 365 ITD 367 (400)
Q Consensus 365 ~~~ 367 (400)
+..
T Consensus 607 t~~ 609 (910)
T KOG1539|consen 607 TGT 609 (910)
T ss_pred Ccc
Confidence 643
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.6e-17 Score=145.36 Aligned_cols=71 Identities=7% Similarity=0.133 Sum_probs=59.2
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccC-CC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKP-TN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~-~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
..|.+|+|||.. +..++++|.|++||+|+++. |. ...|.++|-+++|+-+| ..+++|+.|+.+|+||+.++
T Consensus 28 DsIS~l~FSP~~-~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsddg-skVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 28 DSISALAFSPQA-DNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDG-SKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred cchheeEecccc-CceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCC-ceEEeeccCCceEEEEccCC
Confidence 558899999942 34555788999999999976 44 34678899999999985 78999999999999999988
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=150.75 Aligned_cols=232 Identities=16% Similarity=0.275 Sum_probs=152.7
Q ss_pred CCeEEEecCCCeEEEEEcCCCCccccC---------CCCc-ceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 15 GELLATGDKGGRVVIFQRDPLSKTSIP---------KRGE-YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 15 G~~Las~s~Dg~I~iwd~~~~~~~~~~---------~~~~-~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
|+|+|.|.+|-.|.|||++-.....|. +... .+.-..-++|+. -|.++.|+..-. +.
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTd------------avl~Ls~n~~~~-nV 258 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTD------------AVLALSWNRNFR-NV 258 (463)
T ss_pred cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchH------------HHHHHHhccccc-ee
Confidence 689999999999999998743221110 0000 000011235653 366777776532 34
Q ss_pred EEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
++++|.|.||+|||+.+|++ ..|...|.+++|||.....+++||.|++|+|.|.|......
T Consensus 259 LaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~--------------- 323 (463)
T KOG0270|consen 259 LASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSG--------------- 323 (463)
T ss_pred EEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccC---------------
Confidence 55678899999999999984 34678899999999999999999999999999998651100
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc--E
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR--Y 238 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~--~ 238 (400)
+.| ...+.|..|+|.|... +
T Consensus 324 ---------------------------------------------~~w-------------k~~g~VEkv~w~~~se~~f 345 (463)
T KOG0270|consen 324 ---------------------------------------------KEW-------------KFDGEVEKVAWDPHSENSF 345 (463)
T ss_pred ---------------------------------------------ceE-------------EeccceEEEEecCCCceeE
Confidence 001 0125688999999766 4
Q ss_pred EEEecCCeEEEEeCCCCCCceeeecCCCcCCCC---------cccCCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 239 MISRDYLCVKVWDLHMESRPVETYPTHTKEENG---------QLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 239 las~~D~tIklWD~~~~~~~l~~~~~h~~~~~g---------~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
+++++||+++-+|+|..+.|+-++.+|.....| -+..++.+..+++|+|..+... .+ ..|...
T Consensus 346 ~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~------~v--~~~~~~ 417 (463)
T KOG0270|consen 346 FVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPK------SV--KEHSFK 417 (463)
T ss_pred EEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCc------cc--cccccc
Confidence 556789999999999988899999999532111 1223677788888877533210 00 112111
Q ss_pred eEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEE-ec-CCeEEEEeCcc
Q psy12356 310 INSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLS-AD-DLRINLWHLEI 365 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las-~~-D~~i~lW~~~~ 365 (400)
+ +...|.++.|+-..+.+ ++ .+.+||||+-+
T Consensus 418 ~-------------------------~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~ 450 (463)
T KOG0270|consen 418 L-------------------------GRLHCFALDPDVAFTLAFGGEKAVLRVWDIFT 450 (463)
T ss_pred c-------------------------cceeecccCCCcceEEEecCccceEEEeeccc
Confidence 0 11346677788775444 54 55799999865
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=144.87 Aligned_cols=192 Identities=16% Similarity=0.234 Sum_probs=140.5
Q ss_pred eeeEEEEEECCCCC--eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 3 VYMREASQRFSDGE--LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 3 ~~~v~~v~fspdG~--~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
.+.|+++.|.|+-. .|.+|+.||.|.+|+.. .+..+.++++|. +.|+.|+.+|.+
T Consensus 83 agsitaL~F~~~~S~shLlS~sdDG~i~iw~~~-----------~W~~~~slK~H~------------~~Vt~lsiHPS~ 139 (362)
T KOG0294|consen 83 AGSITALKFYPPLSKSHLLSGSDDGHIIIWRVG-----------SWELLKSLKAHK------------GQVTDLSIHPSG 139 (362)
T ss_pred ccceEEEEecCCcchhheeeecCCCcEEEEEcC-----------CeEEeeeecccc------------cccceeEecCCC
Confidence 47899999999775 89999999999999985 467788999998 459999999976
Q ss_pred CCceEEE-eeCCCeEEEEEccCCC---cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 81 NQAHFLL-STNDQSFNIVDIKPTN---MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 81 ~~~~~l~-ss~D~tI~lWd~~~~~---~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
+++. -+.|+.+|+|++-.|+ +..+...-+.|.|+|.| ..|+-++.++ |-+|.+....+........+.
T Consensus 140 ---KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~G-d~F~v~~~~~-i~i~q~d~A~v~~~i~~~~r~--- 211 (362)
T KOG0294|consen 140 ---KLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQG-DHFVVSGRNK-IDIYQLDNASVFREIENPKRI--- 211 (362)
T ss_pred ---ceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCC-CEEEEEeccE-EEEEecccHhHhhhhhccccc---
Confidence 5665 5899999999998876 22344444569999986 5677666654 889999887553321111100
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE--CC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI--SN 234 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f--Sp 234 (400)
+.+. ..+.-....|..|+.|++||....... ..+.+|.+.|-++.+ .|
T Consensus 212 -----l~~~---------~l~~~~L~vG~d~~~i~~~D~ds~~~~----------------~~~~AH~~RVK~i~~~~~~ 261 (362)
T KOG0294|consen 212 -----LCAT---------FLDGSELLVGGDNEWISLKDTDSDTPL----------------TEFLAHENRVKDIASYTNP 261 (362)
T ss_pred -----eeee---------ecCCceEEEecCCceEEEeccCCCccc----------------eeeecchhheeeeEEEecC
Confidence 0000 112223455668999999998863221 225589999999884 68
Q ss_pred CCcEEEE-ecCCeEEEEeCCCC
Q psy12356 235 SGRYMIS-RDYLCVKVWDLHME 255 (400)
Q Consensus 235 dg~~las-~~D~tIklWD~~~~ 255 (400)
++.+|++ ++||.|++||+++.
T Consensus 262 ~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 262 EHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred CceEEEEeccCceEEEEEcccc
Confidence 8999997 57999999999986
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=4e-16 Score=138.96 Aligned_cols=201 Identities=13% Similarity=0.138 Sum_probs=138.7
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC 144 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~ 144 (400)
..++.|.|+.++. .+++++.|.++.+|--..|+ ..+|++.|+++..+-+. ..+++|+.|.+++|||+.+|+++
T Consensus 11 RplTqiKyN~eGD--LlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s-~~liTGSAD~t~kLWDv~tGk~l 87 (327)
T KOG0643|consen 11 RPLTQIKYNREGD--LLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDS-KHLITGSADQTAKLWDVETGKQL 87 (327)
T ss_pred cccceEEecCCCc--EEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCc-ceeeeccccceeEEEEcCCCcEE
Confidence 3488999998874 67788999999999886665 47899999999998874 68999999999999999999653
Q ss_pred ccccceeccCc-ccceeceeccCchhhhhhcccCcceeecC---CCCCeEEEeecccccccCcccccccCCCCCCCcccc
Q psy12356 145 DRHSKCLIEGT-NCNCQGLIVPESKREERQSSQNRREKEDN---RRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFF 220 (400)
Q Consensus 145 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
.. .. +..+..+.|+.+. +.....+. +..+.|.++|++..... . .-+. |.++ +
T Consensus 88 a~-------~k~~~~Vk~~~F~~~g--------n~~l~~tD~~mg~~~~v~~fdi~~~~~~-~---~s~e---p~~k--I 143 (327)
T KOG0643|consen 88 AT-------WKTNSPVKRVDFSFGG--------NLILASTDKQMGYTCFVSVFDIRDDSSD-I---DSEE---PYLK--I 143 (327)
T ss_pred EE-------eecCCeeEEEeeccCC--------cEEEEEehhhcCcceEEEEEEccCChhh-h---cccC---ceEE--e
Confidence 32 21 1122222332211 11111111 24568899999854311 0 0000 0111 2
Q ss_pred cccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCcc
Q psy12356 221 SEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPR 299 (400)
Q Consensus 221 ~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~ 299 (400)
..+...++++-|+|-+++|+++ .|+.|..||++++...++.-
T Consensus 144 ~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~------------------------------------- 186 (327)
T KOG0643|consen 144 PTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSD------------------------------------- 186 (327)
T ss_pred cCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeech-------------------------------------
Confidence 2344679999999999999986 68999999999863211100
Q ss_pred ceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 300 RIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 300 ~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
.-|+..|+.+.||||..+++++ .|.+-++||..+
T Consensus 187 --------------------------------~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t 221 (327)
T KOG0643|consen 187 --------------------------------EEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRT 221 (327)
T ss_pred --------------------------------hhhccccccccccCCcceEEecccCccceeeeccc
Confidence 1266678899999999999997 699999999875
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.7e-15 Score=144.65 Aligned_cols=196 Identities=12% Similarity=0.106 Sum_probs=132.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|-+++|+ +|.+|.|.+.+|+|.-||+.+. +.+..+.... ..|.+++.+|.+. .
T Consensus 71 sIE~L~W~-e~~RLFS~g~sg~i~EwDl~~l-----------k~~~~~d~~g------------g~IWsiai~p~~~--~ 124 (691)
T KOG2048|consen 71 SIESLAWA-EGGRLFSSGLSGSITEWDLHTL-----------KQKYNIDSNG------------GAIWSIAINPENT--I 124 (691)
T ss_pred ceeeEEEc-cCCeEEeecCCceEEEEecccC-----------ceeEEecCCC------------cceeEEEeCCccc--e
Confidence 57889999 6668999999999999999853 2233333222 3488999998753 6
Q ss_pred EEEeeCCCeEEEEEccCCCcc------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc---Cc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNME------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE---GT 155 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~---~~ 155 (400)
++.++.||.+.+.+..++.+. ...+.|-+++|+|++ ..+|+|+.||.|++||+..+.....+...+.. ..
T Consensus 125 l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~-~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~ 203 (691)
T KOG2048|consen 125 LAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTG-TKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKRE 203 (691)
T ss_pred EEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCc-cEEEecccCceEEEEEcCCCceEEEeeecccccccCC
Confidence 667889998888887777632 124679999999985 67899999999999999988532211111111 12
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
.+.+|++.+- .++..++ |...|+|+.||-..+.+.+. +..|...|.+++-.++
T Consensus 204 ~~iVWSv~~L---------rd~tI~s--gDS~G~V~FWd~~~gTLiqS----------------~~~h~adVl~Lav~~~ 256 (691)
T KOG2048|consen 204 PTIVWSVLFL---------RDSTIAS--GDSAGTVTFWDSIFGTLIQS----------------HSCHDADVLALAVADN 256 (691)
T ss_pred ceEEEEEEEe---------ecCcEEE--ecCCceEEEEcccCcchhhh----------------hhhhhcceeEEEEcCC
Confidence 3556665442 1222333 33589999999887665321 2356677888888888
Q ss_pred CcEEEE-ecCCeEEEEeCCC
Q psy12356 236 GRYMIS-RDYLCVKVWDLHM 254 (400)
Q Consensus 236 g~~las-~~D~tIklWD~~~ 254 (400)
+.++.+ +-|+.|-.+...+
T Consensus 257 ~d~vfsaGvd~~ii~~~~~~ 276 (691)
T KOG2048|consen 257 EDRVFSAGVDPKIIQYSLTT 276 (691)
T ss_pred CCeEEEccCCCceEEEEecC
Confidence 887775 4476555554443
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.4e-16 Score=142.41 Aligned_cols=204 Identities=13% Similarity=0.214 Sum_probs=130.2
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCccccc--------ccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNMEELN--------EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~~~~--------~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
+.|++++|+.||. .+++++.|++||||+++.-..++|. +.-+.|.|+||-...++++-.-.+++++.+..
T Consensus 87 ~~vt~~~FsSdGK--~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K 164 (420)
T KOG2096|consen 87 KEVTDVAFSSDGK--KLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVK 164 (420)
T ss_pred CceeeeEEcCCCc--eeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeee
Confidence 4599999998874 6777899999999999875544331 23578999998555555555566788887655
Q ss_pred ccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccc
Q psy12356 141 AALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFF 220 (400)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
..- + .+ .++ .-=|| + .+. -
T Consensus 165 ~~d--G------~~--------~~~------------------------~v~~D--------~----~~f---------~ 183 (420)
T KOG2096|consen 165 KTD--G------SG--------SHH------------------------FVHID--------N----LEF---------E 183 (420)
T ss_pred ccc--C------CC--------Ccc------------------------ccccc--------c----ccc---------c
Confidence 410 0 00 000 00011 0 011 1
Q ss_pred cccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCcccCC-CCCceeecCcccccc
Q psy12356 221 SEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLRDP-SNITALRVPQIKPIE 291 (400)
Q Consensus 221 ~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~~~-~~~~~i~l~~~~~~~ 291 (400)
..|.-.|-.+-.--++++|+| +.|.+|.|||++ | +.|+.+..-+ .+|+|++++. +-.--+
T Consensus 184 ~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-G-q~L~~idtnq~~n~~aavSP~GRFia~~gFTpDV--------- 252 (420)
T KOG2096|consen 184 RKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-G-QLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDV--------- 252 (420)
T ss_pred hhcccceEEEeecCCceEEEEecCCCcEEEEecC-C-ceeeeeccccccccceeeCCCCcEEEEecCCCCc---------
Confidence 235556666777778889997 468999999999 3 4566654322 3566666432 211122
Q ss_pred eeeccCccceeccccccceEEEEEcCCCcEEeecccchh-hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 292 LTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIF-ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~-~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
.||.+.|--||+.-.. .+.+ ..||+..|.+.+|||+++.++|. .||++||||++.
T Consensus 253 -----------------kVwE~~f~kdG~fqev--~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdV 309 (420)
T KOG2096|consen 253 -----------------KVWEPIFTKDGTFQEV--KRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDV 309 (420)
T ss_pred -----------------eEEEEEeccCcchhhh--hhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccc
Confidence 2445555555543211 1222 26999999999999999999996 699999999875
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=148.67 Aligned_cols=193 Identities=17% Similarity=0.204 Sum_probs=142.5
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.++.|+|+...++++|.|..|+||...... + -.....|+ ++|+.+..+|.+. .
T Consensus 263 ki~~v~~~~~~~~v~~aSad~~i~vws~~~~s--------~---~~~~~~h~------------~~V~~ls~h~tge--Y 317 (506)
T KOG0289|consen 263 KITSVKFHKDLDTVITASADEIIRVWSVPLSS--------E---PTSSRPHE------------EPVTGLSLHPTGE--Y 317 (506)
T ss_pred EEEEEEeccchhheeecCCcceEEeecccccc--------C---cccccccc------------ccceeeeeccCCc--E
Confidence 58899999999999999999999999987532 1 11345565 5699999999874 7
Q ss_pred EEEeeCCCeEEEEEccCCCc-cccc-----ccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM-EELN-----EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~-~~~~-----~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
++++++|+++.+-|+++|.. ..+. -.+++.+||||| .+|++|..|+.||+||+..+.....|..+
T Consensus 318 llsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDg-Lifgtgt~d~~vkiwdlks~~~~a~Fpgh-------- 388 (506)
T KOG0289|consen 318 LLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDG-LIFGTGTPDGVVKIWDLKSQTNVAKFPGH-------- 388 (506)
T ss_pred EEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCc-eEEeccCCCceEEEEEcCCccccccCCCC--------
Confidence 77899999999999999873 1111 137999999985 89999999999999999988543322211
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
.++...+.++.+++..++++.|+.|++||+|..+. .+.+..++ ..+|.++.|.+.|++
T Consensus 389 -------t~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n----~kt~~l~~-----------~~~v~s~~fD~SGt~ 446 (506)
T KOG0289|consen 389 -------TGPVKAISFSENGYWLATAADDGSVKLWDLRKLKN----FKTIQLDE-----------KKEVNSLSFDQSGTY 446 (506)
T ss_pred -------CCceeEEEeccCceEEEEEecCCeEEEEEehhhcc----cceeeccc-----------cccceeEEEcCCCCe
Confidence 11123345567888888889999999999996542 22332221 136999999999999
Q ss_pred EEEe-cCCeEEEEeCC
Q psy12356 239 MISR-DYLCVKVWDLH 253 (400)
Q Consensus 239 las~-~D~tIklWD~~ 253 (400)
|+.+ +|=.|.+.+-.
T Consensus 447 L~~~g~~l~Vy~~~k~ 462 (506)
T KOG0289|consen 447 LGIAGSDLQVYICKKK 462 (506)
T ss_pred EEeecceeEEEEEecc
Confidence 9864 55556666543
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.9e-16 Score=137.41 Aligned_cols=200 Identities=11% Similarity=0.178 Sum_probs=137.0
Q ss_pred eeEEEEEECC--CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFS--DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fsp--dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
|-|+-|+|-. -|.+|||||.||+|.||.-+.++ ..-...++.|.. .|++|+|.|.+.
T Consensus 57 GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~---------w~k~~e~~~h~~------------SVNsV~waphey 115 (299)
T KOG1332|consen 57 GPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGR---------WTKAYEHAAHSA------------SVNSVAWAPHEY 115 (299)
T ss_pred CCeeEEeecccccCcEeeEeecCceEEEEecCCCc---------hhhhhhhhhhcc------------cceeeccccccc
Confidence 4578899954 89999999999999999987653 222335566664 499999999765
Q ss_pred CceEEEeeCCCeEEEEEccCC-C------cccccccEEEEEEecC---C----------CCEEEEEeCCCeEEEEecccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPT-N------MEELNEVITAAEFHPI---D----------CNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~-~------~~~~~~~V~sv~f~p~---~----------~~~las~s~Dg~i~lWD~~~~ 141 (400)
+-.++.++.||.|.|.+.+.. . ..-|.-.|++|+|.|. | -..|+||+.|+.||||+...+
T Consensus 116 gl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~ 195 (299)
T KOG1332|consen 116 GLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD 195 (299)
T ss_pred ceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCc
Confidence 444555789999999998654 2 1235566899999986 2 146999999999999999886
Q ss_pred ccc-----ccccceeccCcccceeceeccCchhhhhhcccC----cceeecCCCCCeEEEeecccccccCcccccccCCC
Q psy12356 142 ALC-----DRHSKCLIEGTNCNCQGLIVPESKREERQSSQN----RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPE 212 (400)
Q Consensus 142 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~ 212 (400)
.-. +.|..-++. +.-.|. ....++.+.||++-||-.+. ....-.
T Consensus 196 ~w~~e~~l~~H~dwVRD------------------VAwaP~~gl~~s~iAS~SqDg~viIwt~~~-e~e~wk-------- 248 (299)
T KOG1332|consen 196 SWKLERTLEGHKDWVRD------------------VAWAPSVGLPKSTIASCSQDGTVIIWTKDE-EYEPWK-------- 248 (299)
T ss_pred chhhhhhhhhcchhhhh------------------hhhccccCCCceeeEEecCCCcEEEEEecC-ccCccc--------
Confidence 321 112211111 111121 12367778999999998762 211100
Q ss_pred CCCCcccccccccCeEEEEECCCCcEEE-EecCCeEEEEeCCCC
Q psy12356 213 DPTNKSFFSEIISSISDVKISNSGRYMI-SRDYLCVKVWDLHME 255 (400)
Q Consensus 213 ~~~~~~~~~~h~~~V~~v~fSpdg~~la-s~~D~tIklWD~~~~ 255 (400)
...+......+..+.||+.|++|+ +++|+.|++|.-...
T Consensus 249 ----~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~ 288 (299)
T KOG1332|consen 249 ----KTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVD 288 (299)
T ss_pred ----ccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCCC
Confidence 111122346799999999999998 568999999965543
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-16 Score=162.61 Aligned_cols=245 Identities=17% Similarity=0.212 Sum_probs=155.8
Q ss_pred EEEEECCCCC-eEEEe----------cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEE
Q psy12356 7 EASQRFSDGE-LLATG----------DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 75 (400)
Q Consensus 7 ~~v~fspdG~-~Las~----------s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~ 75 (400)
..++|||++. +||+| |.+.++-||.++.... ....+.+. ++....+.+.++
T Consensus 10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~-----~~dlk~~~-------------s~~s~~rF~kL~ 71 (1049)
T KOG0307|consen 10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDE-----SSDLKPVG-------------SLQSSNRFNKLA 71 (1049)
T ss_pred ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCc-----cccccccc-------------cccccccceeee
Confidence 4678999997 77776 3355566665543210 01112221 222335788999
Q ss_pred EEeccCC--ceEEEeeCCCeEEEEEccC---CC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 76 WLRRKNQ--AHFLLSTNDQSFNIVDIKP---TN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 76 ~sp~~~~--~~~l~ss~D~tI~lWd~~~---~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
|.+.+.+ +.++.+..||.|-|||... +. +..|.+.|.++.|++..++++|+|+.||.|-|||+.....
T Consensus 72 W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~t 151 (1049)
T KOG0307|consen 72 WGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPET 151 (1049)
T ss_pred ecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCC
Confidence 9988753 2455567899999999865 22 3467889999999999988999999999999999987532
Q ss_pred cccccce-eccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccc
Q psy12356 144 CDRHSKC-LIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222 (400)
Q Consensus 144 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
--..... ......+.-|+.. ...+.++++.+|.+-+||+|..+.. ..+ ..
T Consensus 152 P~~~~~~~~~~eI~~lsWNrk-------------vqhILAS~s~sg~~~iWDlr~~~pi----i~l------------s~ 202 (1049)
T KOG0307|consen 152 PFTPGSQAPPSEIKCLSWNRK-------------VSHILASGSPSGRAVIWDLRKKKPI----IKL------------SD 202 (1049)
T ss_pred CCCCCCCCCcccceEeccchh-------------hhHHhhccCCCCCceeccccCCCcc----ccc------------cc
Confidence 1100000 0000001111110 1123566778999999999975321 111 12
Q ss_pred cc--cCeEEEEECCCCc--EEEEe-cC--CeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeec
Q psy12356 223 II--SSISDVKISNSGR--YMISR-DY--LCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVE 295 (400)
Q Consensus 223 h~--~~V~~v~fSpdg~--~las~-~D--~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~ 295 (400)
|. ..+..|+|+|+.. +++++ +| -.|++||+|....|+++|++
T Consensus 203 ~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~------------------------------- 251 (1049)
T KOG0307|consen 203 TPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEG------------------------------- 251 (1049)
T ss_pred CCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcc-------------------------------
Confidence 22 2478899999865 33344 33 58999999976666665544
Q ss_pred cCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCC-CEEEEe-cCCeEEEEeCccCC
Q psy12356 296 ASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQ-ETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 296 ~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg-~~las~-~D~~i~lW~~~~~~ 367 (400)
|+..|.++.|++.+ ++|+|+ .|+.|-.|+.++++
T Consensus 252 --------------------------------------H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgE 287 (1049)
T KOG0307|consen 252 --------------------------------------HQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGE 287 (1049)
T ss_pred --------------------------------------cccceeeeccCCCCchhhhcccCCCCeeEecCCCce
Confidence 44446667777766 788886 59999999998754
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.7e-16 Score=145.60 Aligned_cols=201 Identities=15% Similarity=0.203 Sum_probs=135.2
Q ss_pred cceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC--------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 68 EEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN--------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 68 ~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~--------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
.++|++++|+|..+...++++..-|+|-+||+.+.+ +..|...|+++.|+|.+...+.++|.||+||+-|+.
T Consensus 186 ~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~ 265 (498)
T KOG4328|consen 186 DRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFE 265 (498)
T ss_pred ccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeec
Confidence 477999999998865566677788999999996332 234677899999999988899999999999999998
Q ss_pred cccccccccceeccCc--ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCc
Q psy12356 140 AAALCDRHSKCLIEGT--NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNK 217 (400)
Q Consensus 140 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 217 (400)
++.. ..+.... ..-+..+.++ +.++..+. +..=|...+||+|+.+..-..
T Consensus 266 ~~i~-----e~v~s~~~d~~~fs~~d~~---------~e~~~vl~-~~~~G~f~~iD~R~~~s~~~~------------- 317 (498)
T KOG4328|consen 266 GNIS-----EEVLSLDTDNIWFSSLDFS---------AESRSVLF-GDNVGNFNVIDLRTDGSEYEN------------- 317 (498)
T ss_pred chhh-----HHHhhcCccceeeeecccc---------CCCccEEE-eecccceEEEEeecCCccchh-------------
Confidence 8732 1111111 0011111111 11222222 223348899999986532110
Q ss_pred ccccccccCeEEEEECCCCcE-EEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeec
Q psy12356 218 SFFSEIISSISDVKISNSGRY-MISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVE 295 (400)
Q Consensus 218 ~~~~~h~~~V~~v~fSpdg~~-las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~ 295 (400)
+.-|...|.+|+++|-..+ ||++ .|+|+||||++.-+.. +. | .+
T Consensus 318 --~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K-~s-------p-----------~l------------- 363 (498)
T KOG4328|consen 318 --LRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGK-AS-------P-----------FL------------- 363 (498)
T ss_pred --hhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCC-CC-------c-----------ce-------------
Confidence 2245668999999997765 5664 6999999999953210 00 0 00
Q ss_pred cCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEE-ecCCeEEEEeCc
Q psy12356 296 ASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLS-ADDLRINLWHLE 364 (400)
Q Consensus 296 ~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las-~~D~~i~lW~~~ 364 (400)
+ .-.|...|++..|||+|-.|++ +.|++|||||..
T Consensus 364 ----------s------------------------t~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 364 ----------S------------------------TLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred ----------e------------------------cccccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence 0 0147888999999999888888 479999999974
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.8e-16 Score=142.63 Aligned_cols=135 Identities=42% Similarity=0.701 Sum_probs=95.8
Q ss_pred cCeEEEEECCC-Cc--EEEEecCCeEEEEeCCCCCCceeeec--CCC---cCC-CCcccCCCCCceeecCcccccceeec
Q psy12356 225 SSISDVKISNS-GR--YMISRDYLCVKVWDLHMESRPVETYP--THT---KEE-NGQLRDPSNITALRVPQIKPIELTVE 295 (400)
Q Consensus 225 ~~V~~v~fSpd-g~--~las~~D~tIklWD~~~~~~~l~~~~--~h~---~~~-~g~~~~~~~~~~i~l~~~~~~~~~~~ 295 (400)
..|..+.|-.+ |+ +|++++|++||||.+.... ++... .-+ ..| .|++.+ ...+++|..
T Consensus 86 EKin~I~w~~~t~r~hFLlstNdktiKlWKiyekn--lk~va~nnls~~~~~~~~g~~~s---~~~l~lprl-------- 152 (460)
T COG5170 86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKN--LKVVAENNLSDSFHSPMGGPLTS---TKELLLPRL-------- 152 (460)
T ss_pred HHhhheeeecCCCcceEEEecCCceeeeeeeeccc--chhhhccccccccccccCCCcCC---HHHhhcccc--------
Confidence 35777777544 33 7889999999999998653 22210 000 111 111111 111222211
Q ss_pred cCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEecCCeEEEEeCccCCeeEEEEee
Q psy12356 296 ASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSADDLRINLWHLEITDQSFNIVDI 375 (400)
Q Consensus 296 ~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~~~~~~~~~~~ 375 (400)
..|+ .++++.+.+++...|...|++|+|+.|.++++|++|-.|.+|+++..++||+|+|+
T Consensus 153 --------s~hd------------~iiaa~p~rvyaNaH~yhiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDi 212 (460)
T COG5170 153 --------SEHD------------EIIAAKPCRVYANAHPYHINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDI 212 (460)
T ss_pred --------cccc------------eEEEeccceeccccceeEeeeeeecCchheeeeccceeeeeccccccCCceEEEec
Confidence 1222 34555666777778999999999999999999999999999999999999999999
Q ss_pred cCCcccchhhhhhhhhh
Q psy12356 376 KPTNMEELNEVREIYYL 392 (400)
Q Consensus 376 ~~~~~~~~~~~~~~~~~ 392 (400)
||.|||||-|||+-+-|
T Consensus 213 KP~nmeeLteVItSaeF 229 (460)
T COG5170 213 KPHNMEELTEVITSAEF 229 (460)
T ss_pred cCccHHHHHHHHhhccc
Confidence 99999999999999876
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-14 Score=136.45 Aligned_cols=299 Identities=14% Similarity=0.169 Sum_probs=190.4
Q ss_pred eEEEEEECCCCCeEEEecCCC--------eEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEE
Q psy12356 5 MREASQRFSDGELLATGDKGG--------RVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 76 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg--------~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~ 76 (400)
-|.|++.+||--++|+|-.-| .|||||..+- ..+..+... +.+|.+|+|
T Consensus 106 dikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L-----------~TL~V~g~f------------~~GV~~vaF 162 (626)
T KOG2106|consen 106 DIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTL-----------STLHVIGFF------------DRGVTCVAF 162 (626)
T ss_pred ceEEEeecCCceeeccCcccccCCCcCCCeeeecccccc-----------eeeeeeccc------------cccceeeee
Confidence 378899999999999887666 4999997642 123333322 256999999
Q ss_pred EeccCCceEEE--eeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccc---c
Q psy12356 77 LRRKNQAHFLL--STNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR---H 147 (400)
Q Consensus 77 sp~~~~~~~l~--ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~---~ 147 (400)
++-..+..+++ .+++.-+-+||...+. .+..++.|....|||.+.+++++++. +-+..|+.+++.+.++ +
T Consensus 163 sk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k~~~~f 241 (626)
T KOG2106|consen 163 SKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVKRQGIF 241 (626)
T ss_pred cccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEEEeecc
Confidence 99764444444 2667789999998765 23445678899999999999888865 7799999999866432 1
Q ss_pred cceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 148 SKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
.+..+.. +.. +.+.+++. +.++..+|.|-+|+.++.... ++.+ .|.+.|
T Consensus 242 ek~ekk~----Vl~----------v~F~engd-viTgDS~G~i~Iw~~~~~~~~---------------k~~~-aH~ggv 290 (626)
T KOG2106|consen 242 EKREKKF----VLC----------VTFLENGD-VITGDSGGNILIWSKGTNRIS---------------KQVH-AHDGGV 290 (626)
T ss_pred ccccceE----EEE----------EEEcCCCC-EEeecCCceEEEEeCCCceEE---------------eEee-ecCCce
Confidence 1111000 001 12223433 334556999999998653211 1112 688999
Q ss_pred EEEEECCCCcEEEEecCCeEEEEeCCCCCCceee-------------ecCCC----------------------------
Q psy12356 228 SDVKISNSGRYMISRDYLCVKVWDLHMESRPVET-------------YPTHT---------------------------- 266 (400)
Q Consensus 228 ~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~-------------~~~h~---------------------------- 266 (400)
.++.---+|++|..+-|+.|-+||-.- ++++. ++++.
T Consensus 291 ~~L~~lr~GtllSGgKDRki~~Wd~~y--~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~ 368 (626)
T KOG2106|consen 291 FSLCMLRDGTLLSGGKDRKIILWDDNY--RKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHG 368 (626)
T ss_pred EEEEEecCccEeecCccceEEeccccc--cccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecc
Confidence 999999999988855699999999332 12221 11111
Q ss_pred -------cCCC-CcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccch---------
Q psy12356 267 -------KEEN-GQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGI--------- 329 (400)
Q Consensus 267 -------~~~~-g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~--------- 329 (400)
.+|. .+++..+.++.++||+ .... ++..--.+...++.|.|.|.++++.....
T Consensus 369 delwgla~hps~~q~~T~gqdk~v~lW~--~~k~--------~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~ 438 (626)
T KOG2106|consen 369 DELWGLATHPSKNQLLTCGQDKHVRLWN--DHKL--------EWTKIIEDPAECADFHPSGVVAVGTATGRWFVLDTETQ 438 (626)
T ss_pred cceeeEEcCCChhheeeccCcceEEEcc--CCce--------eEEEEecCceeEeeccCcceEEEeeccceEEEEecccc
Confidence 0121 2234456677777775 1111 11122234567888888884443321111
Q ss_pred -hh--cccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCeeE
Q psy12356 330 -FA--DAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQSF 370 (400)
Q Consensus 330 -~~--~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~~~ 370 (400)
.. +-...+++.++|||||.+||-+ .|+-|.|+.++...+.+
T Consensus 439 ~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y 483 (626)
T KOG2106|consen 439 DLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKY 483 (626)
T ss_pred eeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEE
Confidence 11 1126789999999999999997 69999999998766554
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-14 Score=139.18 Aligned_cols=295 Identities=14% Similarity=0.202 Sum_probs=189.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.||.|.++|+ ++||+.+|.|.||+..+ .++.+....|. ++|.++....++ .
T Consensus 248 ~Vl~v~F~engd-viTgDS~G~i~Iw~~~~-----------~~~~k~~~aH~------------ggv~~L~~lr~G---t 300 (626)
T KOG2106|consen 248 FVLCVTFLENGD-VITGDSGGNILIWSKGT-----------NRISKQVHAHD------------GGVFSLCMLRDG---T 300 (626)
T ss_pred EEEEEEEcCCCC-EEeecCCceEEEEeCCC-----------ceEEeEeeecC------------CceEEEEEecCc---c
Confidence 589999999997 67899999999999853 23333333554 679999988766 7
Q ss_pred EEEeeCCCeEEEEEccCCC-----c-------c--------------------------------cccccEEEEEEecCC
Q psy12356 85 FLLSTNDQSFNIVDIKPTN-----M-------E--------------------------------ELNEVITAAEFHPID 120 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~-----~-------~--------------------------------~~~~~V~sv~f~p~~ 120 (400)
+++++.|..|.+||-.=.. + + .|....+.++.||+.
T Consensus 301 llSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~ 380 (626)
T KOG2106|consen 301 LLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSK 380 (626)
T ss_pred EeecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCCh
Confidence 8998899999999832000 0 0 012236788999974
Q ss_pred CCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccc
Q psy12356 121 CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAAL 200 (400)
Q Consensus 121 ~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~ 200 (400)
+.|++++.|+.++||+ ..++. |...+- .+...+.+.|.+ .++.|...|..-+.|..+..+
T Consensus 381 -~q~~T~gqdk~v~lW~--~~k~~---------------wt~~~~-d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~l 440 (626)
T KOG2106|consen 381 -NQLLTCGQDKHVRLWN--DHKLE---------------WTKIIE-DPAECADFHPSG-VVAVGTATGRWFVLDTETQDL 440 (626)
T ss_pred -hheeeccCcceEEEcc--CCcee---------------EEEEec-CceeEeeccCcc-eEEEeeccceEEEEeccccee
Confidence 7899999999999999 22111 100000 011122334555 455555677777777765322
Q ss_pred cCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCC--------CcCCCC
Q psy12356 201 CDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTH--------TKEENG 271 (400)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h--------~~~~~g 271 (400)
.. . -.. +.+++.|+|||+|.+||- +.|+.|.|+-+...+..+....-| .+++|+
T Consensus 441 v~-----~-----------~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds 503 (626)
T KOG2106|consen 441 VT-----I-----------HTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDS 503 (626)
T ss_pred EE-----E-----------Eec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCC
Confidence 10 0 011 357999999999999995 569999999998876544433322 256788
Q ss_pred ccc-CCCCCceeecCcccccceeec--------cCcc---ceeccccccceEEEEEcCCCcEEeeccc----chh-----
Q psy12356 272 QLR-DPSNITALRVPQIKPIELTVE--------ASPR---RIFANAHTYHINSISVNSDQLTVEASPR----GIF----- 330 (400)
Q Consensus 272 ~~~-~~~~~~~i~l~~~~~~~~~~~--------~~~~---~~~~~~~~~~i~~i~~s~dg~~~~~~~~----~~~----- 330 (400)
+++ +.+.+..+-.|....-....+ ..+. .++...|.-.|+.++-+.+.+++|.+.. +++
T Consensus 504 ~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~ 583 (626)
T KOG2106|consen 504 QFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCS 583 (626)
T ss_pred ceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccC
Confidence 875 466666666663221111110 0110 1222334445677777777766664321 111
Q ss_pred --------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 331 --------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 331 --------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
..||+..|.+|+|+-+.+.|+|. .|..|-.|++
T Consensus 584 s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 584 SPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRL 625 (626)
T ss_pred CCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEEe
Confidence 14899999999999999988885 6999999986
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-14 Score=139.92 Aligned_cols=214 Identities=11% Similarity=0.137 Sum_probs=143.5
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.++|||.+++.||.+=.||.|.||++... +-....+.+++. ..|.+++|++. ++
T Consensus 27 ~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~----------w~~~~vi~g~~d-----------rsIE~L~W~e~---~R 82 (691)
T KOG2048|consen 27 EIVSLAYSHKSNQLAVSRTDGNIEIWNLSNN----------WFLEPVIHGPED-----------RSIESLAWAEG---GR 82 (691)
T ss_pred ceEEEEEeccCCceeeeccCCcEEEEccCCC----------ceeeEEEecCCC-----------CceeeEEEccC---Ce
Confidence 5789999999999999999999999999753 223346667653 45899999954 38
Q ss_pred EEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++++-+|+|--||+.+++. ....+.|++++.+|.+ ..++.|+.||.+...+...+.+......... ...+.
T Consensus 83 LFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~-~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq---~sRvL 158 (691)
T KOG2048|consen 83 LFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPEN-TILAIGCDDGVLYDFSIGPDKITYKRSLMRQ---KSRVL 158 (691)
T ss_pred EEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCcc-ceEEeecCCceEEEEecCCceEEEEeecccc---cceEE
Confidence 88889999999999988762 2235689999999975 6788888999878877766643110000000 00111
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
.+ ...+++.-.++|+.||.||+||+..+.........+.... . .-..-|.+|.|-.|+. ||
T Consensus 159 sl----------sw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~-----k---~~~~iVWSv~~Lrd~t-I~ 219 (691)
T KOG2048|consen 159 SL----------SWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLS-----K---REPTIVWSVLFLRDST-IA 219 (691)
T ss_pred EE----------EecCCccEEEecccCceEEEEEcCCCceEEEeeecccccc-----c---CCceEEEEEEEeecCc-EE
Confidence 11 2235566577889999999999987543210000011000 0 0113488899887764 45
Q ss_pred Ee-cCCeEEEEeCCCCCCceeeecCCC
Q psy12356 241 SR-DYLCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 241 s~-~D~tIklWD~~~~~~~l~~~~~h~ 266 (400)
++ +-|+|++||...+. .++.+..|.
T Consensus 220 sgDS~G~V~FWd~~~gT-LiqS~~~h~ 245 (691)
T KOG2048|consen 220 SGDSAGTVTFWDSIFGT-LIQSHSCHD 245 (691)
T ss_pred EecCCceEEEEcccCcc-hhhhhhhhh
Confidence 55 45999999999874 566666663
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=3e-15 Score=146.97 Aligned_cols=239 Identities=12% Similarity=0.095 Sum_probs=155.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+|..+.|-|--.+|++++.|.+|++||+.+.+.. | .+.+.||+. .|.+++|.|+.+ .
T Consensus 101 nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~-----G----~~~~~GH~~------------SvkS~cf~~~n~-~ 158 (720)
T KOG0321|consen 101 NAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLV-----G----GRLNLGHTG------------SVKSECFMPTNP-A 158 (720)
T ss_pred ceeEeeccCCCceeEEEccCCceeeeeeeccceee-----c----ceeeccccc------------ccchhhhccCCC-c
Confidence 47889999996678999999999999999864311 1 224678874 489999999864 4
Q ss_pred eEEEeeCCCeEEEEEccCCCc--------------cc---c------------------cccEEEEEEecCCCCEEEEEe
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM--------------EE---L------------------NEVITAAEFHPIDCNLFVYSS 128 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~--------------~~---~------------------~~~V~sv~f~p~~~~~las~s 128 (400)
.|++++.|+.|.|||++-... .+ + .+.|+.+.| .| ...||++|
T Consensus 159 vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~f-kD-e~tlaSag 236 (720)
T KOG0321|consen 159 VFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLF-KD-ESTLASAG 236 (720)
T ss_pred ceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEE-ec-cceeeecc
Confidence 677789999999999963220 00 0 122445544 44 47899999
Q ss_pred C-CCeEEEEecccccccccc-c---ceeccC--cccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccccccc
Q psy12356 129 S-KGTIRLCDMRAAALCDRH-S---KCLIEG--TNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALC 201 (400)
Q Consensus 129 ~-Dg~i~lWD~~~~~~~~~~-~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~ 201 (400)
. |++||+||+|......+. . ...... ......++++. ..+......+.|+.|.+|+++.-..
T Consensus 237 a~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lD----------ssGt~L~AsCtD~sIy~ynm~s~s~- 305 (720)
T KOG0321|consen 237 AADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILD----------SSGTYLFASCTDNSIYFYNMRSLSI- 305 (720)
T ss_pred CCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEec----------CCCCeEEEEecCCcEEEEeccccCc-
Confidence 8 999999999987321100 0 000000 00111122221 1111222235699999999986432
Q ss_pred CcccccccCCCCCCCcccccccccC--eEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCc---------CC
Q psy12356 202 DRHSKFFEEPEDPTNKSFFSEIISS--ISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTK---------EE 269 (400)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~h~~~--V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~---------~~ 269 (400)
.+...|. ++... -..-..|||+.+|+++ .|..+.+|.+.+...+...+.||.. .+
T Consensus 306 -sP~~~~s------------g~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~ 372 (720)
T KOG0321|consen 306 -SPVAEFS------------GKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSA 372 (720)
T ss_pred -Cchhhcc------------CcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeecccc
Confidence 2222221 22221 1234568999999975 6999999999998777777888852 35
Q ss_pred CCcccCCCCCceeecCccccc
Q psy12356 270 NGQLRDPSNITALRVPQIKPI 290 (400)
Q Consensus 270 ~g~~~~~~~~~~i~l~~~~~~ 290 (400)
.+++++.+.|..+++|++.++
T Consensus 373 ~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 373 TTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred CCCceeeccCcceEEEeccCc
Confidence 677776789999999998644
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.1e-14 Score=144.84 Aligned_cols=314 Identities=14% Similarity=0.132 Sum_probs=190.9
Q ss_pred eeEEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeee-eccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTF-QSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
|.|++++|.-||. .+|+|+..|.+-+||+++... .... ..|. +.|....|.|..+
T Consensus 245 g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl-----------~~v~~nah~------------~sv~~~~fl~~ep 301 (910)
T KOG1539|consen 245 GRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKL-----------INVTRNAHY------------GSVTGATFLPGEP 301 (910)
T ss_pred cceeEEEeccCCCeeEEeccCCceEEEEEcCCCee-----------eeeeecccc------------CCcccceecCCCc
Confidence 6899999999997 566777789999999986421 1122 2453 3477788888654
Q ss_pred CceEEEeeCCCeEEEEEccCCC-----c---ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc----ccccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN-----M---EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC----DRHSK 149 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~-----~---~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~----~~~~~ 149 (400)
.+++++.|+..++|=.+++. + .+|..+-.++.|....+..+.+++.|++.+.+++....+. +.|..
T Consensus 302 --Vl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~ 379 (910)
T KOG1539|consen 302 --VLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNK 379 (910)
T ss_pred --eEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccc
Confidence 45557889999999776543 1 3577777889998656788999999999999998765321 11110
Q ss_pred e-----------------eccCc--------------------ccceeceeccCchh----------hhh-----hcccC
Q psy12356 150 C-----------------LIEGT--------------------NCNCQGLIVPESKR----------EER-----QSSQN 177 (400)
Q Consensus 150 ~-----------------~~~~~--------------------~~~~~~~~~~~~~~----------~~~-----~~~~~ 177 (400)
. +.... .+..|+..-..... +.+ .-++=
T Consensus 380 ~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~C 459 (910)
T KOG1539|consen 380 KRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFC 459 (910)
T ss_pred cccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEecc
Confidence 0 00000 01111110000000 000 00000
Q ss_pred cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCC
Q psy12356 178 RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMES 256 (400)
Q Consensus 178 ~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~ 256 (400)
+.....|...|+|-++++..|-.- +.|. + -..|..+|..|+...-++.++|+ .+|-++.||.....
T Consensus 460 GNF~~IG~S~G~Id~fNmQSGi~r----~sf~-------~--~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~ 526 (910)
T KOG1539|consen 460 GNFVFIGYSKGTIDRFNMQSGIHR----KSFG-------D--SPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKV 526 (910)
T ss_pred CceEEEeccCCeEEEEEcccCeee----cccc-------c--CccccCceeEEEecCCCceEEEccCcceEEEEecCCcc
Confidence 111122445778888887765321 1111 0 02677899999998888888875 69999999999753
Q ss_pred Cceeeec-CCC-----cCCCCccc-CCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeeccc--
Q psy12356 257 RPVETYP-THT-----KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR-- 327 (400)
Q Consensus 257 ~~l~~~~-~h~-----~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~-- 327 (400)
+++.+. ++. +++...++ .+-.+..|++.|...-. --+. .+||...|++.+|||||++|++++.
T Consensus 527 -l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~k------vvR~-f~gh~nritd~~FS~DgrWlisasmD~ 598 (910)
T KOG1539|consen 527 -LKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRK------VVRE-FWGHGNRITDMTFSPDGRWLISASMDS 598 (910)
T ss_pred -eeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhh------hhHH-hhccccceeeeEeCCCCcEEEEeecCC
Confidence 444443 221 12211122 23344555543321100 0022 4789999999999999999987664
Q ss_pred --chhh--c-------ccccceeEEEEccCCCEEEEe-cC-CeEEEEeC
Q psy12356 328 --GIFA--D-------AHTYHISSTSVNSDQETYLSA-DD-LRINLWHL 363 (400)
Q Consensus 328 --~~~~--~-------gh~~~V~~i~fspDg~~las~-~D-~~i~lW~~ 363 (400)
++|. . .=..+..++.|||.|.+||++ -| +-|.+|-=
T Consensus 599 tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylWsN 647 (910)
T KOG1539|consen 599 TIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLWSN 647 (910)
T ss_pred cEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEecCceEEEEEc
Confidence 2221 1 224678899999999999997 35 67999963
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.6e-15 Score=141.06 Aligned_cols=218 Identities=14% Similarity=0.217 Sum_probs=134.2
Q ss_pred cceeeEEEEEeccCCceEEEee-CCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 68 EEKINKIRWLRRKNQAHFLLST-NDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 68 ~~~V~~v~~sp~~~~~~~l~ss-~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
.+.|.+++-+|.+ .+++++ --+.++||.+.+|.+ ..|-..|+++.|+-|| ..|+|||.||.|.+|++..--
T Consensus 81 Pg~v~al~s~n~G---~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dg-s~iiTgskDg~V~vW~l~~lv 156 (476)
T KOG0646|consen 81 PGPVHALASSNLG---YFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDG-SHIITGSKDGAVLVWLLTDLV 156 (476)
T ss_pred ccceeeeecCCCc---eEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCC-cEEEecCCCccEEEEEEEeec
Confidence 3568888888776 677766 789999999999984 4567789999999975 799999999999999975530
Q ss_pred ccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccc
Q psy12356 143 LCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222 (400)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
+ +..|+ ...+.. .+.+
T Consensus 157 ----------------------~------------------a~~~~------------~~~p~~------------~f~~ 172 (476)
T KOG0646|consen 157 ----------------------S------------------ADNDH------------SVKPLH------------IFSD 172 (476)
T ss_pred ----------------------c------------------cccCC------------Ccccee------------eecc
Confidence 0 00011 001111 2447
Q ss_pred cccCeEEEEECCCC--cEEE-EecCCeEEEEeCCCCCCceeeecCCC------cCCCC-cccCCCCCceeecCcccccce
Q psy12356 223 IISSISDVKISNSG--RYMI-SRDYLCVKVWDLHMESRPVETYPTHT------KEENG-QLRDPSNITALRVPQIKPIEL 292 (400)
Q Consensus 223 h~~~V~~v~fSpdg--~~la-s~~D~tIklWD~~~~~~~l~~~~~h~------~~~~g-~~~~~~~~~~i~l~~~~~~~~ 292 (400)
|+-+|+++...+-| .+|+ ++.|.|||+||+..+. .|.++.-.. .-|.+ .+..++.++.+-+..+...
T Consensus 173 HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~-LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~-- 249 (476)
T KOG0646|consen 173 HTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGV-LLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKL-- 249 (476)
T ss_pred CcceeEEEEecCCCccceEEEecCCceEEEEEeccce-eeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcC--
Confidence 88889888776542 2455 4679999999999874 455542110 00100 0111222333322111000
Q ss_pred eeccCccceeccccccceEEEEEcCCCcEEeecccchhhccccc--ceeEEEEccCCCEEEEec-CCeEEEEeCccCCee
Q psy12356 293 TVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTY--HISSTSVNSDQETYLSAD-DLRINLWHLEITDQS 369 (400)
Q Consensus 293 ~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~--~V~~i~fspDg~~las~~-D~~i~lW~~~~~~~~ 369 (400)
.+-...++.-.+.++++.+ +. ..||.+ .|++++.|-||..|+||+ ||+|.|||+.. .||
T Consensus 250 -----------~~~~~~v~~k~~~~~~t~~-----~~-~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S-~Q~ 311 (476)
T KOG0646|consen 250 -----------SGQSAGVNQKGRHEENTQI-----NV-LVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYS-KQC 311 (476)
T ss_pred -----------Cccccccccccccccccee-----ee-eccccCCcceeEEEEecCccEEEeeCCCCCEEEEecch-HHH
Confidence 0000011111122222111 01 148988 999999999999999995 99999999985 556
Q ss_pred EEEEe
Q psy12356 370 FNIVD 374 (400)
Q Consensus 370 ~~~~~ 374 (400)
.+.+-
T Consensus 312 iRtl~ 316 (476)
T KOG0646|consen 312 IRTLQ 316 (476)
T ss_pred HHHHh
Confidence 65554
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.7e-15 Score=140.04 Aligned_cols=214 Identities=13% Similarity=0.170 Sum_probs=136.1
Q ss_pred cceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 68 EEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 68 ~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
-++|.+++=+|.. -..+++++.||.|+|||+.... ++.|.+.|.+++++. +.++|++.|.+||.|.+...-.
T Consensus 66 rdGV~~lakhp~~-ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~---~~~~tvgdDKtvK~wk~~~~p~ 141 (433)
T KOG0268|consen 66 RDGVSCLAKHPNK-LSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ---TSFFTVGDDKTVKQWKIDGPPL 141 (433)
T ss_pred ccccchhhcCcch-hhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc---cceEEecCCcceeeeeccCCcc
Confidence 3679999988853 2367788999999999998765 356788999999976 4589999999999999876511
Q ss_pred cccccceeccCcc-cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccc
Q psy12356 144 CDRHSKCLIEGTN-CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222 (400)
Q Consensus 144 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
+ +..+ ....++ ...-.....++ -...|.|||.+- +.+++.+. -
T Consensus 142 -~-------tilg~s~~~gI----------dh~~~~~~FaT--cGe~i~IWD~~R----~~Pv~sms------------w 185 (433)
T KOG0268|consen 142 -H-------TILGKSVYLGI----------DHHRKNSVFAT--CGEQIDIWDEQR----DNPVSSMS------------W 185 (433)
T ss_pred -e-------eeecccccccc----------ccccccccccc--cCceeeeccccc----CCccceee------------c
Confidence 1 0000 000011 00000111111 134799999863 22222221 1
Q ss_pred cccCeEEEEECCCCc-EEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccc
Q psy12356 223 IISSISDVKISNSGR-YMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRR 300 (400)
Q Consensus 223 h~~~V~~v~fSpdg~-~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~ 300 (400)
-...|.+|.|+|-.. +|+++ +|++|-|+|++.+ .||+....- ..
T Consensus 186 G~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~-~Pl~KVi~~--mR------------------------------- 231 (433)
T KOG0268|consen 186 GADSISSVKFNPVETSILASCASDRSIVLYDLRQA-SPLKKVILT--MR------------------------------- 231 (433)
T ss_pred CCCceeEEecCCCcchheeeeccCCceEEEecccC-Cccceeeee--cc-------------------------------
Confidence 125789999999766 55654 7999999999986 577653100 00
Q ss_pred eeccccccceEEEEEcCCCcEEeec----------------ccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 301 IFANAHTYHINSISVNSDQLTVEAS----------------PRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 301 ~~~~~~~~~i~~i~~s~dg~~~~~~----------------~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
-|.|+|+|.+--+.++ +... ..+|...|.+|+|||.|+-++|| .|.+|||+..
T Consensus 232 ---------TN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v-~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~ 301 (433)
T KOG0268|consen 232 ---------TNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNV-HKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPV 301 (433)
T ss_pred ---------ccceecCccccceeeccccccceehhhhhhcccchh-hcccceeEEEeccCCCcchhccccccceEEEeec
Confidence 0222333321111111 0111 25899999999999999999997 6999999998
Q ss_pred cc
Q psy12356 364 EI 365 (400)
Q Consensus 364 ~~ 365 (400)
..
T Consensus 302 ~~ 303 (433)
T KOG0268|consen 302 NH 303 (433)
T ss_pred CC
Confidence 75
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=136.22 Aligned_cols=215 Identities=10% Similarity=0.122 Sum_probs=142.4
Q ss_pred eeeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 3 VYMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 3 ~~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
++-|..++|+| +.+.|||||.|.+|+||++.+..... ...++...+.||+ ++|.-|+|+|.-.
T Consensus 81 t~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~----~ltepvv~L~gH~------------rrVg~V~wHPtA~ 144 (472)
T KOG0303|consen 81 TAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTR----DLTEPVVELYGHQ------------RRVGLVQWHPTAP 144 (472)
T ss_pred cccccccccCccCCceeecCCCCceEEEEECCCccccc----CcccceEEEeecc------------eeEEEEeecccch
Confidence 35678899999 77899999999999999998754221 1224456778887 5799999999753
Q ss_pred CceEEEeeCCCeEEEEEccCCC-c--ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN-M--EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~-~--~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
+.+++++.|.+|.||++.+|+ + -.|...|.+++|+-+| .+|++++.|..||+||.|++.++.... .+.+..
T Consensus 145 -NVLlsag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dG-s~l~TtckDKkvRv~dpr~~~~v~e~~----~heG~k 218 (472)
T KOG0303|consen 145 -NVLLSAGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDG-SLLCTTCKDKKVRVIDPRRGTVVSEGV----AHEGAK 218 (472)
T ss_pred -hhHhhccCCceEEEEeccCCceeeecCCCCeEEEEEeccCC-ceeeeecccceeEEEcCCCCcEeeecc----cccCCC
Confidence 467778999999999999998 2 2377889999999985 799999999999999999996543210 111111
Q ss_pred eeceeccCchhhhhhcccCcceee---cCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 159 CQGLIVPESKREERQSSQNRREKE---DNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
....++ ..++.... +-..+..+-|||-..-.. ++...+ + ...+.|.-=-|.||
T Consensus 219 ~~Raif----------l~~g~i~tTGfsr~seRq~aLwdp~nl~e---P~~~~e----------l-DtSnGvl~PFyD~d 274 (472)
T KOG0303|consen 219 PARAIF----------LASGKIFTTGFSRMSERQIALWDPNNLEE---PIALQE----------L-DTSNGVLLPFYDPD 274 (472)
T ss_pred cceeEE----------eccCceeeeccccccccceeccCcccccC---cceeEE----------e-ccCCceEEeeecCC
Confidence 010001 11221111 112456788888764321 111110 0 12245655557888
Q ss_pred CcEEE-Ee-cCCeEEEEeCCCCCCceeeec
Q psy12356 236 GRYMI-SR-DYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 236 g~~la-s~-~D~tIklWD~~~~~~~l~~~~ 263 (400)
.+++. .+ +|+.||.+.+....--++.++
T Consensus 275 t~ivYl~GKGD~~IRYyEit~d~P~~hyln 304 (472)
T KOG0303|consen 275 TSIVYLCGKGDSSIRYFEITNEPPFVHYLN 304 (472)
T ss_pred CCEEEEEecCCcceEEEEecCCCceeEEec
Confidence 88664 44 899999999997532244443
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.7e-14 Score=132.49 Aligned_cols=231 Identities=12% Similarity=0.135 Sum_probs=138.5
Q ss_pred eEEEEEECCCCCeE-EEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELL-ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~L-as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+.+++|+|||+++ ++++.++.|++||..+++ ....+..+. .+..+.|+|+++
T Consensus 32 ~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~-----------~~~~~~~~~-------------~~~~~~~~~~g~-- 85 (300)
T TIGR03866 32 RPRGITLSKDGKLLYVCASDSDTIQVIDLATGE-----------VIGTLPSGP-------------DPELFALHPNGK-- 85 (300)
T ss_pred CCCceEECCCCCEEEEEECCCCeEEEEECCCCc-----------EEEeccCCC-------------CccEEEECCCCC--
Confidence 35689999999976 677889999999987532 233343332 145678998863
Q ss_pred eEEEe-eCCCeEEEEEccCCCc-cc--ccccEEEEEEecCCCCEEEEEeCCC-eEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLLS-TNDQSFNIVDIKPTNM-EE--LNEVITAAEFHPIDCNLFVYSSSKG-TIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~s-s~D~tI~lWd~~~~~~-~~--~~~~V~sv~f~p~~~~~las~s~Dg-~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.++++ +.|+.+++||+++++. .. ....+.+++|+|++ .++++++.++ .+..||.+++...... .. ...
T Consensus 86 ~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~d~~~~~~~~~~---~~---~~~ 158 (300)
T TIGR03866 86 ILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDG-KIVVNTSETTNMAHFIDTKTYEIVDNV---LV---DQR 158 (300)
T ss_pred EEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCC-CEEEEEecCCCeEEEEeCCCCeEEEEE---Ec---CCC
Confidence 45444 5689999999987652 11 12346789999985 6778777764 5778898876432110 00 000
Q ss_pred eeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 159 CQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
... +...+++. ..+++..++.|++||+++++..... .+..+.. .. + ......++|+|+|+
T Consensus 159 ~~~----------~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~--~~~~~~~---~~---~-~~~~~~i~~s~dg~ 219 (300)
T TIGR03866 159 PRF----------AEFTADGKELWVSSEIGGTVSVIDVATRKVIKKI--TFEIPGV---HP---E-AVQPVGIKLTKDGK 219 (300)
T ss_pred ccE----------EEECCCCCEEEEEcCCCCEEEEEEcCcceeeeee--eeccccc---cc---c-cCCccceEECCCCC
Confidence 001 11234443 3344556899999999876532110 0111100 00 0 01234689999999
Q ss_pred EEE-E-ecCCeEEEEeCCCCCCceeeec-CC-----CcCCCCccc-C-CCCCceeecCccc
Q psy12356 238 YMI-S-RDYLCVKVWDLHMESRPVETYP-TH-----TKEENGQLR-D-PSNITALRVPQIK 288 (400)
Q Consensus 238 ~la-s-~~D~tIklWD~~~~~~~l~~~~-~h-----~~~~~g~~~-~-~~~~~~i~l~~~~ 288 (400)
++. + +.+++|.+||++++. .+..+. ++ .+.++|+++ + .+.++.|++|++.
T Consensus 220 ~~~~~~~~~~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~ 279 (300)
T TIGR03866 220 TAFVALGPANRVAVVDAKTYE-VLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVA 279 (300)
T ss_pred EEEEEcCCCCeEEEEECCCCc-EEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECC
Confidence 854 3 456789999998753 344332 22 145677754 2 3456677777654
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-14 Score=128.91 Aligned_cols=161 Identities=16% Similarity=0.229 Sum_probs=116.4
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
++.|.||.|-|+++.||+-. |..|.+|++++..++ .+.+..-. +.+.....++-+|+|.++.
T Consensus 123 vg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~----------vaev~ss~-------s~e~~~~ftsg~WspHHdg 184 (370)
T KOG1007|consen 123 VGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKI----------VAEVLSSE-------SAEMRHSFTSGAWSPHHDG 184 (370)
T ss_pred hCceeeEEEcCCCCeeEEec-cCceEEEEcccCcch----------heeecccc-------cccccceecccccCCCCcc
Confidence 57899999999999999886 889999999875421 11111000 1112234677889997644
Q ss_pred ceEEEeeCCCeEEEEEccCCCc-----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNM-----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~-----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
..+....|++++.||+++-.. ..|...|..+.|+|+-.-.||||+.||.||+||+|..+. .+
T Consensus 185 -nqv~tt~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~------pv------ 251 (370)
T KOG1007|consen 185 -NQVATTSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKF------PV------ 251 (370)
T ss_pred -ceEEEeCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCc------cc------
Confidence 455556799999999986542 235667999999998777899999999999999987610 00
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
+. +.+|..+|.+|+|+|.-.
T Consensus 252 ------------------------------------------------~e------------l~~HsHWvW~VRfn~~hd 271 (370)
T KOG1007|consen 252 ------------------------------------------------QE------------LPGHSHWVWAVRFNPEHD 271 (370)
T ss_pred ------------------------------------------------cc------------cCCCceEEEEEEecCccc
Confidence 00 236888999999999755
Q ss_pred EE-EE-ecCCeEEEEeCCC
Q psy12356 238 YM-IS-RDYLCVKVWDLHM 254 (400)
Q Consensus 238 ~l-as-~~D~tIklWD~~~ 254 (400)
.| ++ ++|..|-||-...
T Consensus 272 qLiLs~~SDs~V~Lsca~s 290 (370)
T KOG1007|consen 272 QLILSGGSDSAVNLSCASS 290 (370)
T ss_pred eEEEecCCCceeEEEeccc
Confidence 44 45 5799999998764
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.7e-15 Score=142.30 Aligned_cols=228 Identities=21% Similarity=0.294 Sum_probs=144.9
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeee-eccCcchhhcccccccceeeEEEEEeccC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTF-QSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.|-|+|++|+.||.+|||||.|-.+.|||... +|+++.+ .||++. |.++.|.|..+
T Consensus 50 ~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~-----------~KllhsI~TgHtaN------------IFsvKFvP~tn 106 (758)
T KOG1310|consen 50 TGCVNCLEWNADGELLASGSDDTRLIVWDPFE-----------YKLLHSISTGHTAN------------IFSVKFVPYTN 106 (758)
T ss_pred cceecceeecCCCCEEeecCCcceEEeecchh-----------cceeeeeecccccc------------eeEEeeeccCC
Confidence 46799999999999999999999999999874 3344433 478865 99999999887
Q ss_pred CceEEEeeCCCeEEEEEccCCC---c-----------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN---M-----------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRH 147 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~---~-----------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~ 147 (400)
+..+++++.|+.|+|+|+...+ + ..|...|--++-.|.+.+.|-++++||+|+..|+|....+...
T Consensus 107 nriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~ 186 (758)
T KOG1310|consen 107 NRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPD 186 (758)
T ss_pred CeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCcc
Confidence 7677788999999999997421 1 1244567778888988899999999999999999997443322
Q ss_pred cceeccCcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCc--------------ccccccCCC
Q psy12356 148 SKCLIEGTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDR--------------HSKFFEEPE 212 (400)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~--------------~~~~~~~~~ 212 (400)
..|...+.+-+.+-+.+ ..+..+|.+ ...+.|+.|.-.||||.|...-... ..+.|. |.
T Consensus 187 ~~~~~~l~ny~~~liel-----k~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~-p~ 260 (758)
T KOG1310|consen 187 EDCPSILVNYNPQLIEL-----KCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFS-PG 260 (758)
T ss_pred ccccHHHHHhchhhhee-----eeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheec-Cc
Confidence 22222221111100000 011112333 2345566799999999654211000 011111 10
Q ss_pred CCCCcccccc-ccc---CeEEEEECCCCcEEE-EecCCeEEEEeCCCCCCceeee
Q psy12356 213 DPTNKSFFSE-IIS---SISDVKISNSGRYMI-SRDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 213 ~~~~~~~~~~-h~~---~V~~v~fSpdg~~la-s~~D~tIklWD~~~~~~~l~~~ 262 (400)
. ++. ..+ ... -++-+.|+|+|.-|+ +=+...|.++|+..+..+...+
T Consensus 261 h--lkn-~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~~~y~ 312 (758)
T KOG1310|consen 261 H--LKN-SQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSPTPYF 312 (758)
T ss_pred c--ccC-cccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCceeec
Confidence 0 000 001 011 246689999998655 5455689999999876554443
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=7e-14 Score=127.73 Aligned_cols=220 Identities=15% Similarity=0.219 Sum_probs=123.8
Q ss_pred EEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec----cCC
Q psy12356 7 EASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR----KNQ 82 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~----~~~ 82 (400)
..+.|||||..|.+-+.|....+|++.-..-.. +. .... .+..|. .+.++. .+.|...+|=+- .++
T Consensus 53 kgckWSPDGSciL~~sedn~l~~~nlP~dlys~--~~-~~~~--~~~~~~-~~r~~e----g~tvydy~wYs~M~s~qP~ 122 (406)
T KOG2919|consen 53 KGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSK--KA-DGPL--NFSKHL-SYRYQE----GETVYDYCWYSRMKSDQPS 122 (406)
T ss_pred ccceeCCCCceEEeecccCeeeEEecChhhccc--CC-CCcc--ccccce-eEEecc----CCEEEEEEeeeccccCCCc
Confidence 467899999999999999999999986321000 00 0000 011111 001111 134667777421 122
Q ss_pred -ceEEEeeCCCeEEEEEccCCCcc------ccccc---EEEEEEecCCCCEEEEEeCCCeEEEEec-cccccccc---cc
Q psy12356 83 -AHFLLSTNDQSFNIVDIKPTNME------ELNEV---ITAAEFHPIDCNLFVYSSSKGTIRLCDM-RAAALCDR---HS 148 (400)
Q Consensus 83 -~~~l~ss~D~tI~lWd~~~~~~~------~~~~~---V~sv~f~p~~~~~las~s~Dg~i~lWD~-~~~~~~~~---~~ 148 (400)
+.+++++.|.-|+|||.-+|+++ .|... --+++|+|||.+ +.++..+.||++|+ |.|.-.+. ..
T Consensus 123 t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeq--lfaGykrcirvFdt~RpGr~c~vy~t~~ 200 (406)
T KOG2919|consen 123 TNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQ--LFAGYKRCIRVFDTSRPGRDCPVYTTVT 200 (406)
T ss_pred cceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCe--EeecccceEEEeeccCCCCCCcchhhhh
Confidence 36777889999999999998753 22222 348999999754 45678999999999 55521110 00
Q ss_pred ceeccCcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 149 KCLIEGTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
+...+..+ .+.-+ .++|.. ...+-++....+-|+.-... ++. ..+-+|.+.|
T Consensus 201 ~~k~gq~g-iisc~----------a~sP~~~~~~a~gsY~q~~giy~~~~~----~pl------------~llggh~gGv 253 (406)
T KOG2919|consen 201 KGKFGQKG-IISCF----------AFSPMDSKTLAVGSYGQRVGIYNDDGR----RPL------------QLLGGHGGGV 253 (406)
T ss_pred cccccccc-eeeee----------eccCCCCcceeeecccceeeeEecCCC----Cce------------eeecccCCCe
Confidence 00000000 00001 112222 12333333333333321111 111 1133788999
Q ss_pred EEEEECCCCcEEEEec--CCeEEEEeCCCCCCceeeecCC
Q psy12356 228 SDVKISNSGRYMISRD--YLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 228 ~~v~fSpdg~~las~~--D~tIklWD~~~~~~~l~~~~~h 265 (400)
+.++|.|||+.|.++. |-.|-.||++.-..++..+..|
T Consensus 254 ThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rh 293 (406)
T KOG2919|consen 254 THLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERH 293 (406)
T ss_pred eeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhh
Confidence 9999999999998753 7789999999876666665544
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-14 Score=141.36 Aligned_cols=119 Identities=15% Similarity=0.196 Sum_probs=94.6
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|++++|.|..-.|++|+.||++++|++++.... .....+++.+|++|.. .|-||+..+.+. +.
T Consensus 297 ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s---~~~~~epi~tfraH~g------------PVl~v~v~~n~~--~~ 359 (577)
T KOG0642|consen 297 IRALAFHPSEPVLITASEDGTLKLWNLQKAKKS---AEKDVEPILTFRAHEG------------PVLCVVVPSNGE--HC 359 (577)
T ss_pred hhhhhcCCCCCeEEEeccccchhhhhhcccCCc---cccceeeeEEEecccC------------ceEEEEecCCce--EE
Confidence 567789998889999999999999999542211 1245567789999984 599999988764 77
Q ss_pred EEeeCCCeEEEEEccCCC--------------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 86 LLSTNDQSFNIVDIKPTN--------------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~--------------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
.+++.||+|+.|.+.... +.+|.+.|+.+++|+. .+.|+++|.|||+++|+.....
T Consensus 360 ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~-~~~Llscs~DgTvr~w~~~~~~ 429 (577)
T KOG0642|consen 360 YSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSST-KDRLLSCSSDGTVRLWEPTEES 429 (577)
T ss_pred EeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeeccc-ccceeeecCCceEEeeccCCcC
Confidence 788999999999664321 3457788999999997 4679999999999999987763
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-14 Score=130.99 Aligned_cols=110 Identities=15% Similarity=0.221 Sum_probs=89.4
Q ss_pred EEEEECCCCC----eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 7 EASQRFSDGE----LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 7 ~~v~fspdG~----~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..++|+.|.+ +||.|+.-|.|||.|+... ++...+.+|..+ |+.|++.|+.+
T Consensus 93 ytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~-----------~~~~~~~ghG~s------------INeik~~p~~~- 148 (385)
T KOG1034|consen 93 YTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSG-----------QCSKNYRGHGGS------------INEIKFHPDRP- 148 (385)
T ss_pred EEEEEEecCCCCCeeEEeecceeEEEEEecchh-----------hhccceeccCcc------------chhhhcCCCCC-
Confidence 3456665433 7888889999999999753 345567888743 89999999864
Q ss_pred ceEEEeeCCCeEEEEEccCCCc-------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNM-------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~-------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
..++++|.|.+||||++++..+ .+|...|-++.|++++ .+|+|++.|.+|++|++...
T Consensus 149 qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~g-d~i~ScGmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 149 QLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDG-DRIASCGMDHSLKLWRLNVK 213 (385)
T ss_pred cEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCC-CeeeccCCcceEEEEecChh
Confidence 3666789999999999998763 5688899999999986 69999999999999999865
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.7e-14 Score=131.90 Aligned_cols=162 Identities=19% Similarity=0.297 Sum_probs=118.1
Q ss_pred eEEEEEECC-----CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 5 MREASQRFS-----DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 5 ~v~~v~fsp-----dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
.|..++|.+ +-+.+|+++ ...+.||+.... +....++++..- .+++...-++|+.+
T Consensus 40 ~I~gv~fN~~~~~~e~~vfatvG-~~rvtiy~c~~d--------~~ir~lq~y~D~----------d~~Esfytcsw~yd 100 (385)
T KOG1034|consen 40 PIFGVAFNSFLGCDEPQVFATVG-GNRVTIYECPGD--------GGIRLLQSYADE----------DHDESFYTCSWSYD 100 (385)
T ss_pred ccceeeeehhcCCCCCceEEEeC-CcEEEEEEECCc--------cceeeeeeccCC----------CCCcceEEEEEEec
Confidence 356778873 235667766 457889987643 222222222211 23355678899888
Q ss_pred cCC-ceEE-EeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 80 KNQ-AHFL-LSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 80 ~~~-~~~l-~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
.+. .-++ +++.-|.|||.|+.+++ +..|...|+.+.|+|+..++++++|.|.+||||++++. .|+..
T Consensus 101 ~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~-------~Cv~V 173 (385)
T KOG1034|consen 101 SNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTD-------VCVAV 173 (385)
T ss_pred CCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCC-------eEEEE
Confidence 652 3444 46789999999998876 45788899999999998899999999999999999998 33311
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
|.+ ..+|.+.|.+|.||
T Consensus 174 ------------------------------------------------------fGG---------~egHrdeVLSvD~~ 190 (385)
T KOG1034|consen 174 ------------------------------------------------------FGG---------VEGHRDEVLSVDFS 190 (385)
T ss_pred ------------------------------------------------------ecc---------cccccCcEEEEEEc
Confidence 000 23788999999999
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCC
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~ 255 (400)
++|.+|+|+ -|.++++|++...
T Consensus 191 ~~gd~i~ScGmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 191 LDGDRIASCGMDHSLKLWRLNVK 213 (385)
T ss_pred CCCCeeeccCCcceEEEEecChh
Confidence 999999985 5999999999853
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.5e-14 Score=134.10 Aligned_cols=122 Identities=15% Similarity=0.161 Sum_probs=92.4
Q ss_pred eEEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|..+.|.+++. +||||+.|..|+||.++...... ....-+.+..+..|+.+ |+.|+|+|+++
T Consensus 15 pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~--~~~~V~y~s~Ls~H~~a------------VN~vRf~p~ge-- 78 (434)
T KOG1009|consen 15 PVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGG--GDMKVEYLSSLSRHTRA------------VNVVRFSPDGE-- 78 (434)
T ss_pred ceEEEEeccCcccceecccCccceeeeeeeecCCCC--CceeEEEeecccCCcce------------eEEEEEcCCcC--
Confidence 367888998776 99999999999999987543110 00233456677778754 99999999885
Q ss_pred eEEEeeCCCeEEEEEcc--------C-----CC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 84 HFLLSTNDQSFNIVDIK--------P-----TN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~--------~-----~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
.+++++.++.|-||-.. + .+ +..|...|..++|+|++ +.+++++-|+++++||+..+.+
T Consensus 79 lLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~-~~l~s~s~dns~~l~Dv~~G~l 157 (434)
T KOG1009|consen 79 LLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDS-NFLVSGSVDNSVRLWDVHAGQL 157 (434)
T ss_pred eeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCC-ceeeeeeccceEEEEEecccee
Confidence 66667889999999876 2 10 12355678889999985 7889999999999999999854
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-13 Score=134.92 Aligned_cols=273 Identities=17% Similarity=0.171 Sum_probs=162.5
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.+.|.++...|.|.+||+|+.||+||||.+.+++ ++++++- .+.|.+|+|+|.+.-
T Consensus 400 tg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgR-----------cvr~~~~-------------d~~I~~vaw~P~~~~ 455 (733)
T KOG0650|consen 400 TGLVRSISVDPSGEWLASGSDDGTVRIWEIATGR-----------CVRTVQF-------------DSEIRSVAWNPLSDL 455 (733)
T ss_pred CCeEEEEEecCCcceeeecCCCCcEEEEEeecce-----------EEEEEee-------------cceeEEEEecCCCCc
Confidence 4679999999999999999999999999998753 4444432 134999999998754
Q ss_pred ceEEEeeCCCeEEEEEccCCC----------------------------------c-------ccccccEEEEEEecCCC
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN----------------------------------M-------EELNEVITAAEFHPIDC 121 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~----------------------------------~-------~~~~~~V~sv~f~p~~~ 121 (400)
+.++++ .+..+-|-+..=|. . ..|...|+.|.||..|
T Consensus 456 ~vLAvA-~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkG- 533 (733)
T KOG0650|consen 456 CVLAVA-VGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKG- 533 (733)
T ss_pred eeEEEE-ecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCC-
Confidence 444444 32324443322110 0 0122458899999985
Q ss_pred CEEEEEeCC---CeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCc--ceeecCCCCCeEEEeecc
Q psy12356 122 NLFVYSSSK---GTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNR--REKEDNRRKPAIRLCDMR 196 (400)
Q Consensus 122 ~~las~s~D---g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dg~i~lWD~~ 196 (400)
.+|++...+ ..|-|.++..+.....+.+ ..+ .++. +.+.|.. +.+++ ...||+||+.
T Consensus 534 DYlatV~~~~~~~~VliHQLSK~~sQ~PF~k-skG----~vq~----------v~FHPs~p~lfVaT---q~~vRiYdL~ 595 (733)
T KOG0650|consen 534 DYLATVMPDSGNKSVLIHQLSKRKSQSPFRK-SKG----LVQR----------VKFHPSKPYLFVAT---QRSVRIYDLS 595 (733)
T ss_pred ceEEEeccCCCcceEEEEecccccccCchhh-cCC----ceeE----------EEecCCCceEEEEe---ccceEEEehh
Confidence 788887664 4677888776532111100 000 0111 1122332 23443 6789999987
Q ss_pred cccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE-EecCCeEEEEeCCCCCCceeeecCCCc-------C
Q psy12356 197 AAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI-SRDYLCVKVWDLHMESRPVETYPTHTK-------E 268 (400)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la-s~~D~tIklWD~~~~~~~l~~~~~h~~-------~ 268 (400)
...+- +.+. ....+|.+++.+|.|.-|+ ++.|+.+..+|+.....|.+++..|.. +
T Consensus 596 kqelv----KkL~------------tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H 659 (733)
T KOG0650|consen 596 KQELV----KKLL------------TGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFH 659 (733)
T ss_pred HHHHH----HHHh------------cCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhc
Confidence 53321 1111 1125799999999988776 567999999999988888888887741 1
Q ss_pred CCCcc-cCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccc----eeEEEE
Q psy12356 269 ENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYH----ISSTSV 343 (400)
Q Consensus 269 ~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~----V~~i~f 343 (400)
+--.+ ++++.++++.+. . + .++ +. +..+ .+|+ ..+. .+||... |..+.|
T Consensus 660 ~ryPLfas~sdDgtv~Vf--h-------g---~VY--------~D--l~qn-pliV--PlK~-L~gH~~~~~~gVLd~~w 713 (733)
T KOG0650|consen 660 KRYPLFASGSDDGTVIVF--H-------G---MVY--------ND--LLQN-PLIV--PLKR-LRGHEKTNDLGVLDTIW 713 (733)
T ss_pred cccceeeeecCCCcEEEE--e-------e---eee--------hh--hhcC-CceE--eeee-ccCceeecccceEeecc
Confidence 11111 123333333210 0 0 000 00 0000 0000 1111 2578765 889999
Q ss_pred ccCCCEEEEe-cCCeEEEE
Q psy12356 344 NSDQETYLSA-DDLRINLW 361 (400)
Q Consensus 344 spDg~~las~-~D~~i~lW 361 (400)
+|...+|.|+ .|++||+|
T Consensus 714 HP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 714 HPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred cCCCceEEecCCCceEEee
Confidence 9999999997 69999999
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.2e-14 Score=133.95 Aligned_cols=188 Identities=12% Similarity=0.173 Sum_probs=129.9
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC-----------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN-----------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCD 137 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~-----------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD 137 (400)
..|..++|+|.. +..++++|.|.+|+||++..+. +.+|+..|.-|+|||.-.+.|+|++.|.+|++||
T Consensus 82 ~~vLDi~w~Pfn-D~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWn 160 (472)
T KOG0303|consen 82 APVLDIDWCPFN-DCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWN 160 (472)
T ss_pred ccccccccCccC-CceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEe
Confidence 348999999975 6678888999999999997653 2356678999999999889999999999999999
Q ss_pred cccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCc
Q psy12356 138 MRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNK 217 (400)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 217 (400)
+.++.- +.+
T Consensus 161 v~tgea-------li~---------------------------------------------------------------- 169 (472)
T KOG0303|consen 161 VGTGEA-------LIT---------------------------------------------------------------- 169 (472)
T ss_pred ccCCce-------eee----------------------------------------------------------------
Confidence 998821 000
Q ss_pred ccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC--------cCCCCcccCC----CCCceeec
Q psy12356 218 SFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT--------KEENGQLRDP----SNITALRV 284 (400)
Q Consensus 218 ~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~--------~~~~g~~~~~----~~~~~i~l 284 (400)
+ .|..-|.++.|+-||.+|+++ .|+.|||||.+++. .+.+-.+|+ ++.+|++++. ..+..+.|
T Consensus 170 --l-~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~-~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aL 245 (472)
T KOG0303|consen 170 --L-DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGT-VVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIAL 245 (472)
T ss_pred --c-CCCCeEEEEEeccCCceeeeecccceeEEEcCCCCc-EeeecccccCCCcceeEEeccCceeeeccccccccceec
Confidence 0 356779999999999999975 69999999999874 566555674 3445554321 12234444
Q ss_pred CcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEE-Ee-cCCeEEEEe
Q psy12356 285 PQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYL-SA-DDLRINLWH 362 (400)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~la-s~-~D~~i~lW~ 362 (400)
|+....+. +. .... -.-++.|.---+.||...+- .+ +|+.||-+.
T Consensus 246 wdp~nl~e-----P~---------~~~e-------------------lDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyE 292 (472)
T KOG0303|consen 246 WDPNNLEE-----PI---------ALQE-------------------LDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFE 292 (472)
T ss_pred cCcccccC-----cc---------eeEE-------------------eccCCceEEeeecCCCCEEEEEecCCcceEEEE
Confidence 43321110 00 0000 01234455556678887654 45 799999999
Q ss_pred Ccc
Q psy12356 363 LEI 365 (400)
Q Consensus 363 ~~~ 365 (400)
+..
T Consensus 293 it~ 295 (472)
T KOG0303|consen 293 ITN 295 (472)
T ss_pred ecC
Confidence 864
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.1e-14 Score=130.81 Aligned_cols=306 Identities=12% Similarity=0.029 Sum_probs=172.5
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+|-|+++.||.+|++||+|+.|..++||+++..-.. ...+++... +|- |..-|.+++|.-..
T Consensus 56 ~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~-----k~~KPI~~~-~~~----------H~SNIF~L~F~~~N-- 117 (609)
T KOG4227|consen 56 TGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVR-----KTPKPIGVM-EHP----------HRSNIFSLEFDLEN-- 117 (609)
T ss_pred ccccceeeeccCCeEEeecCCcceeeeechHHHHhh-----cCCCCceec-cCc----------cccceEEEEEccCC--
Confidence 467999999999999999999999999998742100 011223222 221 11248999997532
Q ss_pred ceEEEeeCCCeEEEEEccCCCc---ccc---cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNM---EEL---NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~---~~~---~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
..+.++.++++|.+-|+++.+. ..+ .+.|..+.-||. .++|++.+.++.|.+||.|.....- ...|.... .
T Consensus 118 ~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~-DN~~~~~t~~~~V~~~D~Rd~~~~~-~~~~~AN~-~ 194 (609)
T KOG4227|consen 118 RFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPT-DNTLIVVTRAKLVSFIDNRDRQNPI-SLVLPANS-G 194 (609)
T ss_pred eeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCC-CceEEEEecCceEEEEeccCCCCCC-ceeeecCC-C
Confidence 2444567899999999988762 222 347999999998 4899999999999999998763100 00111110 1
Q ss_pred cceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
.+++. +-+.|.. ..+++++..+.+.+||+|..+.. .+.--.+..+. .....-.++.|+|+
T Consensus 195 ~~F~t----------~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~-----~~~~~~~~~L~----~~~~~~M~~~~~~~ 255 (609)
T KOG4227|consen 195 KNFYT----------AEFHPETPALILVNSETGGPNVFDRRMQARP-----VYQRSMFKGLP----QENTEWMGSLWSPS 255 (609)
T ss_pred cccee----------eeecCCCceeEEeccccCCCCceeeccccch-----HHhhhccccCc----ccchhhhheeeCCC
Confidence 11111 1222333 23455667889999999864321 11000000011 11123467999999
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCc----------------ccCCCCCceeecCcccccceeeccCc
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQ----------------LRDPSNITALRVPQIKPIELTVEASP 298 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~----------------~~~~~~~~~i~l~~~~~~~~~~~~~~ 298 (400)
|+.+.+- .-..--++|+-....++-.+. | .++|- +++++.+--+.+|.+...... .
T Consensus 256 G~Q~msiRR~~~P~~~D~~S~R~~V~k~D-~--N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds----~ 328 (609)
T KOG4227|consen 256 GNQFMSIRRGKCPLYFDFISQRCFVLKSD-H--NPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDS----Y 328 (609)
T ss_pred CCeehhhhccCCCEEeeeecccceeEecc-C--CCCcceeeeeeeeeeeecceeeeccCcccceEEEecCCCccc----c
Confidence 9998874 345566788876544443332 2 12221 112222223333322111000 0
Q ss_pred cceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEec-CCeEEEEeC
Q psy12356 299 RRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSAD-DLRINLWHL 363 (400)
Q Consensus 299 ~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~-D~~i~lW~~ 363 (400)
+.+ ..||+..- .|.. ++. ...-....||...+++|.|||...+|+|++ .+.+|||.-
T Consensus 329 G~~-~IG~~~~~-----~~~~-~~i-~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 329 GFT-QIGHDEEE-----MPSE-IFI-EKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred Ccc-ccCcchhh-----Cchh-hee-cceeEEEecccccccceeecCCcceEeccchhhheecccc
Confidence 000 00111100 0000 000 000112369999999999999999999975 899999964
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.1e-14 Score=134.96 Aligned_cols=258 Identities=14% Similarity=0.131 Sum_probs=169.1
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+|-++.+|..-+++-||+ .|.|+|||+...... .++..+..-+. +.-|.++..+||+. .
T Consensus 421 vVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k--------~PvsqLdcl~r----------dnyiRSckL~pdgr--t 479 (705)
T KOG0639|consen 421 VVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNK--------SPVSQLDCLNR----------DNYIRSCKLLPDGR--T 479 (705)
T ss_pred EEEEEEecCCcceeEecC-CCeEEEeeccCCCCC--------CccccccccCc----------ccceeeeEecCCCc--e
Confidence 567889999999999997 677999999864311 11222211111 12367788999885 7
Q ss_pred EEEeeCCCeEEEEEccCCCc--c-ccc---ccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM--E-ELN---EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~--~-~~~---~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
+++++.-.++-|||+..-.. + ++. ....+++.+|| .++..+|..||.|.|||++...+++.+..+--+
T Consensus 480 LivGGeastlsiWDLAapTprikaeltssapaCyALa~spD-akvcFsccsdGnI~vwDLhnq~~VrqfqGhtDG----- 553 (705)
T KOG0639|consen 480 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD-AKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG----- 553 (705)
T ss_pred EEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCc-cceeeeeccCCcEEEEEcccceeeecccCCCCC-----
Confidence 88898889999999975442 1 222 23567889998 477888889999999999998665443221100
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
...+..+.++..+=+|+-|+++|-||+|.+....+ + ....-|.++.+.|++.+
T Consensus 554 ----------ascIdis~dGtklWTGGlDntvRcWDlregrqlqq-------h----------dF~SQIfSLg~cP~~dW 606 (705)
T KOG0639|consen 554 ----------ASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQ-------H----------DFSSQIFSLGYCPTGDW 606 (705)
T ss_pred ----------ceeEEecCCCceeecCCCccceeehhhhhhhhhhh-------h----------hhhhhheecccCCCccc
Confidence 01122235666666778999999999998754211 1 12356899999999999
Q ss_pred EEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCcc-cCCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 239 MISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 239 las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
||-+ ..+.+.|-.+....+ ..+.-|+ |.+.|++ ++.+.|..+..|....... +|-..-...
T Consensus 607 lavGMens~vevlh~skp~k--yqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGas--------iFqskE~Ss 676 (705)
T KOG0639|consen 607 LAVGMENSNVEVLHTSKPEK--YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS--------IFQSKESSS 676 (705)
T ss_pred eeeecccCcEEEEecCCccc--eeecccccEEEEEEecccCceeeecCchhhhhhccCccccc--------eeeccccCc
Confidence 9976 567777777664421 1222232 4567775 4677887777775321111 222223445
Q ss_pred eEEEEEcCCCcEEeecc
Q psy12356 310 INSISVNSDQLTVEASP 326 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~ 326 (400)
|.+..+|.|.++|++..
T Consensus 677 VlsCDIS~ddkyIVTGS 693 (705)
T KOG0639|consen 677 VLSCDISFDDKYIVTGS 693 (705)
T ss_pred ceeeeeccCceEEEecC
Confidence 88889999999987544
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.8e-13 Score=124.32 Aligned_cols=211 Identities=14% Similarity=0.130 Sum_probs=131.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|-++ ..+++|+.||.|+++|++++. . -.+..|. +.|.+|.+++.. +
T Consensus 55 ~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~--------~----~~igth~------------~~i~ci~~~~~~--~ 107 (323)
T KOG1036|consen 55 APLLDCAFADE-STIVTGGLDGQVRRYDLNTGN--------E----DQIGTHD------------EGIRCIEYSYEV--G 107 (323)
T ss_pred CceeeeeccCC-ceEEEeccCceEEEEEecCCc--------c----eeeccCC------------CceEEEEeeccC--C
Confidence 45788999875 468999999999999998753 1 1344565 569999999754 4
Q ss_pred eEEEeeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc-cccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD-RHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~-~~~~~~~~~~~~~~ 159 (400)
.++++|+|++|++||.+..... .....|.++... +++|+.|..|..+.+||+|.-.... .....+. .
T Consensus 108 ~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~---g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lk------y 178 (323)
T KOG1036|consen 108 CVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVS---GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLK------Y 178 (323)
T ss_pred eEEEcccCccEEEEeccccccccccccCceEEEEecc---CCEEEEeecCceEEEEEcccccchhhhccccce------e
Confidence 8999999999999999753321 122467777654 4678889999999999999874311 0000000 0
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
+ ...+...|++--.+.++.||.|.+=.+........-.-.|.-|.... .. .....+|++++|||--..+
T Consensus 179 q--------tR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~-~~--~~~~yPVNai~Fhp~~~tf 247 (323)
T KOG1036|consen 179 Q--------TRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSE-KD--TEIIYPVNAIAFHPIHGTF 247 (323)
T ss_pred E--------EEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeeccc-CC--ceEEEEeceeEeccccceE
Confidence 0 01112234332233445688777754444311111001121111100 00 0112589999999998888
Q ss_pred EEe-cCCeEEEEeCCCCCCceeee
Q psy12356 240 ISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 240 as~-~D~tIklWD~~~~~~~l~~~ 262 (400)
|++ +||-|-+||+.+.. .|..|
T Consensus 248 aTgGsDG~V~~Wd~~~rK-rl~q~ 270 (323)
T KOG1036|consen 248 ATGGSDGIVNIWDLFNRK-RLKQL 270 (323)
T ss_pred EecCCCceEEEccCcchh-hhhhc
Confidence 875 79999999999753 34444
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.7e-14 Score=150.10 Aligned_cols=214 Identities=14% Similarity=0.169 Sum_probs=145.2
Q ss_pred eeEEEEEECCCCCe----EEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 4 YMREASQRFSDGEL----LATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 4 ~~v~~v~fspdG~~----Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
|+-+.++|.+.|.. ||.|..||.|-+||...-. +......+.++..|+ +.|..+.|++.
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~-----~~~~~~~la~~~~h~------------G~V~gLDfN~~ 127 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASII-----ANASEEVLATKSKHT------------GPVLGLDFNPF 127 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhc-----cCcchHHHhhhcccC------------Cceeeeecccc
Confidence 45578999998876 9999999999999987521 112344566777776 44889999998
Q ss_pred cCCceEEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 80 KNQAHFLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 80 ~~~~~~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
. ++.++++++||.|-|||+.+-+. ....+.|.+++|+-.-..+||+++.+|.+-|||+|..+.+-... .
T Consensus 128 q-~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls----~ 202 (1049)
T KOG0307|consen 128 Q-GNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLS----D 202 (1049)
T ss_pred C-CceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccc----c
Confidence 5 34666788999999999976431 11345799999998767789999999999999999884321110 0
Q ss_pred Ccc-cceeceeccCchhhhhhcccCcceeecC-CCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEE
Q psy12356 154 GTN-CNCQGLIVPESKREERQSSQNRREKEDN-RRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVK 231 (400)
Q Consensus 154 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 231 (400)
..+ +.+..+...+. ...+.+++++ ...-.|++||+|.... +.++ +++|...|.++.
T Consensus 203 ~~~~~~~S~l~WhP~-------~aTql~~As~dd~~PviqlWDlR~ass---P~k~------------~~~H~~Gilsls 260 (1049)
T KOG0307|consen 203 TPGRMHCSVLAWHPD-------HATQLLVASGDDSAPVIQLWDLRFASS---PLKI------------LEGHQRGILSLS 260 (1049)
T ss_pred CCCccceeeeeeCCC-------CceeeeeecCCCCCceeEeecccccCC---chhh------------hcccccceeeec
Confidence 001 11111111110 0112233332 2456999999996432 2233 347888999999
Q ss_pred ECCCC-cEEEE-ecCCeEEEEeCCCCCCceeee
Q psy12356 232 ISNSG-RYMIS-RDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 232 fSpdg-~~las-~~D~tIklWD~~~~~~~l~~~ 262 (400)
|.|.+ ++|+| +.|+.|-+|+..++. -|.++
T Consensus 261 Wc~~D~~lllSsgkD~~ii~wN~~tgE-vl~~~ 292 (1049)
T KOG0307|consen 261 WCPQDPRLLLSSGKDNRIICWNPNTGE-VLGEL 292 (1049)
T ss_pred cCCCCchhhhcccCCCCeeEecCCCce-Eeeec
Confidence 99966 67776 469999999999864 34444
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-13 Score=139.81 Aligned_cols=197 Identities=12% Similarity=0.157 Sum_probs=132.8
Q ss_pred ECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeC
Q psy12356 11 RFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTN 90 (400)
Q Consensus 11 fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~ 90 (400)
+.-++.++++|+.+++|.+|...+++. .-++..|.- .+.+++++-++. .++.+|.
T Consensus 62 ia~~s~~f~~~s~~~tv~~y~fps~~~--------~~iL~Rftl---------------p~r~~~v~g~g~--~iaagsd 116 (933)
T KOG1274|consen 62 IACYSNHFLTGSEQNTVLRYKFPSGEE--------DTILARFTL---------------PIRDLAVSGSGK--MIAAGSD 116 (933)
T ss_pred EeecccceEEeeccceEEEeeCCCCCc--------cceeeeeec---------------cceEEEEecCCc--EEEeecC
Confidence 345677999999999999999987541 113333321 267889987653 6677899
Q ss_pred CCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccC
Q psy12356 91 DQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPE 166 (400)
Q Consensus 91 D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (400)
|-.|||-++.+.. +++|.++|.++.|+|.+ ++||+++.||+|++||+.++.+...... +..++-.. .+
T Consensus 117 D~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~-~fLAvss~dG~v~iw~~~~~~~~~tl~~----v~k~n~~~--~s- 188 (933)
T KOG1274|consen 117 DTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKG-NFLAVSSCDGKVQIWDLQDGILSKTLTG----VDKDNEFI--LS- 188 (933)
T ss_pred ceeEEEEeccccchheeecccCCceeeeeEcCCC-CEEEEEecCceEEEEEcccchhhhhccc----CCcccccc--cc-
Confidence 9999999997654 56788999999999985 8999999999999999999854322111 00000000 00
Q ss_pred chhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCC
Q psy12356 167 SKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYL 245 (400)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~ 245 (400)
.........|++...+....|+.|++|+........ .+ +. ..|...+..+.|||+|+|||++ -||
T Consensus 189 ~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f----~L--------r~--~~~ss~~~~~~wsPnG~YiAAs~~~g 254 (933)
T KOG1274|consen 189 RICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQF----KL--------RD--KLSSSKFSDLQWSPNGKYIAASTLDG 254 (933)
T ss_pred ceeeeeeecCCCCeEEeeccCCeEEEEccCCceehe----ee--------cc--cccccceEEEEEcCCCcEEeeeccCC
Confidence 000001223554444444579999999987654311 11 10 1223348899999999999976 599
Q ss_pred eEEEEeCCC
Q psy12356 246 CVKVWDLHM 254 (400)
Q Consensus 246 tIklWD~~~ 254 (400)
.|-|||+++
T Consensus 255 ~I~vWnv~t 263 (933)
T KOG1274|consen 255 QILVWNVDT 263 (933)
T ss_pred cEEEEeccc
Confidence 999999994
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.5e-14 Score=125.25 Aligned_cols=122 Identities=16% Similarity=0.238 Sum_probs=87.9
Q ss_pred eeeEEEEEECCCC-----CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 3 VYMREASQRFSDG-----ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 3 ~~~v~~v~fspdG-----~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
.|-++.+-|.||. ++|||++ ...|||.+...+. ...+...+..+. ..+....+++..|+
T Consensus 96 ~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~-------~~~~~~~L~~~k-------ns~~~aPlTSFDWn 159 (364)
T KOG0290|consen 96 PYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEES-------RVELQSVLNNNK-------NSEFCAPLTSFDWN 159 (364)
T ss_pred CCCccceEecCCccccCcchhhccc--CeEEEEeccCcCC-------ceehhhhhccCc-------ccccCCcccccccc
Confidence 5788999999987 5888875 4699999874321 111111222222 11223457888898
Q ss_pred eccCCceEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 78 RRKNQAHFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 78 p~~~~~~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.-.+ ..+.++|-|.|..|||+++|. +..|...|..++|.-.+.+.|||.|.||.+|++|+|.-
T Consensus 160 e~dp-~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~l 229 (364)
T KOG0290|consen 160 EVDP-NLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSL 229 (364)
T ss_pred cCCc-ceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEeccc
Confidence 6543 355678889999999999873 23467789999999877889999999999999999876
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.9e-13 Score=118.57 Aligned_cols=167 Identities=17% Similarity=0.229 Sum_probs=120.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+-++||.+++|+.|+.+|+|-+..+......+....+..+ +-++++|. ..|+.++|.. .
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~-iv~eqahd------------gpiy~~~f~d-----~ 73 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLK-IVPEQAHD------------GPIYYLAFHD-----D 73 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcc-eeeccccC------------CCeeeeeeeh-----h
Confidence 3556689999999999999999999998764332222223333 33567886 4589999972 4
Q ss_pred EEEeeCCCeEEEEEccCCC----ccc--------cc-----ccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEE--------LN-----EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRH 147 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~--------~~-----~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~ 147 (400)
+|.++.||.|+=|....-. ++. +. ..|+++...|.. +-++.++.|+.+..||+.+|+..
T Consensus 74 ~Lls~gdG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~e-nSi~~AgGD~~~y~~dlE~G~i~--- 149 (325)
T KOG0649|consen 74 FLLSGGDGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSE-NSILFAGGDGVIYQVDLEDGRIQ--- 149 (325)
T ss_pred heeeccCceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCC-CcEEEecCCeEEEEEEecCCEEE---
Confidence 5666668999999875321 111 11 248999999985 55677779999999999888210
Q ss_pred cceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 148 SKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
+. +.||+..|
T Consensus 150 ----------------------------------------------------------r~------------~rGHtDYv 159 (325)
T KOG0649|consen 150 ----------------------------------------------------------RE------------YRGHTDYV 159 (325)
T ss_pred ----------------------------------------------------------EE------------EcCCccee
Confidence 01 24788999
Q ss_pred EEEEE-CCCCcEEEEecCCeEEEEeCCCCCCceeeecC
Q psy12356 228 SDVKI-SNSGRYMISRDYLCVKVWDLHMESRPVETYPT 264 (400)
Q Consensus 228 ~~v~f-Spdg~~las~~D~tIklWD~~~~~~~l~~~~~ 264 (400)
.+|.- +.++++|.++.||++||||.+++ ++++.++.
T Consensus 160 H~vv~R~~~~qilsG~EDGtvRvWd~kt~-k~v~~ie~ 196 (325)
T KOG0649|consen 160 HSVVGRNANGQILSGAEDGTVRVWDTKTQ-KHVSMIEP 196 (325)
T ss_pred eeeeecccCcceeecCCCccEEEEecccc-ceeEEecc
Confidence 99988 67787887789999999999997 46777653
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.3e-12 Score=122.77 Aligned_cols=210 Identities=12% Similarity=0.072 Sum_probs=119.3
Q ss_pred EEEEEECCCCCeEEEec-CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGELLATGD-KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~~Las~s-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+..++|+|||++|+.++ .++.|.+|++++. +......... .. ..+..++|+|+++ .
T Consensus 37 ~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~--------g~l~~~~~~~-~~------------~~p~~i~~~~~g~--~ 93 (330)
T PRK11028 37 VQPMVISPDKRHLYVGVRPEFRVLSYRIADD--------GALTFAAESP-LP------------GSPTHISTDHQGR--F 93 (330)
T ss_pred CccEEECCCCCEEEEEECCCCcEEEEEECCC--------CceEEeeeec-CC------------CCceEEEECCCCC--E
Confidence 56789999999987654 5889999999732 1221121111 00 1256789999874 4
Q ss_pred EEEee-CCCeEEEEEccC-CCcc----c--ccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccc-ceeccCc
Q psy12356 85 FLLST-NDQSFNIVDIKP-TNME----E--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHS-KCLIEGT 155 (400)
Q Consensus 85 ~l~ss-~D~tI~lWd~~~-~~~~----~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~-~~~~~~~ 155 (400)
+++++ .++.|.+||+++ +... . ......+++|+|++..++++...++.|.+||+.+...+.... .......
T Consensus 94 l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~ 173 (330)
T PRK11028 94 LFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE 173 (330)
T ss_pred EEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC
Confidence 55554 489999999964 3221 1 112356788999875555666678999999997642211000 0000000
Q ss_pred ccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCccccccc-CCCCCCCcccccccccCeEEEEEC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFE-EPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
+... ..+...+++. +.+....+++|.+||+......-..++.+. .|. . + .+......+.|+
T Consensus 174 g~~p----------~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~-----~-~-~~~~~~~~i~~~ 236 (330)
T PRK11028 174 GAGP----------RHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPA-----D-F-SDTRWAADIHIT 236 (330)
T ss_pred CCCC----------ceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCC-----c-C-CCCccceeEEEC
Confidence 1111 1122335543 334444589999999974211000011110 010 0 0 011234569999
Q ss_pred CCCcEEEEe--cCCeEEEEeCCCC
Q psy12356 234 NSGRYMISR--DYLCVKVWDLHME 255 (400)
Q Consensus 234 pdg~~las~--~D~tIklWD~~~~ 255 (400)
|||++|..+ .+++|.+|++...
T Consensus 237 pdg~~lyv~~~~~~~I~v~~i~~~ 260 (330)
T PRK11028 237 PDGRHLYACDRTASLISVFSVSED 260 (330)
T ss_pred CCCCEEEEecCCCCeEEEEEEeCC
Confidence 999998865 4689999999754
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-14 Score=145.45 Aligned_cols=222 Identities=15% Similarity=0.168 Sum_probs=142.1
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+|+|+.|.-.|.+|.+|+.|..|+||.+++. .+++..+||+.+ |+.++.+.. ...
T Consensus 192 aVyca~fDrtg~~Iitgsdd~lvKiwS~et~-----------~~lAs~rGhs~d------------itdlavs~~--n~~ 246 (1113)
T KOG0644|consen 192 AVYCAIFDRTGRYIITGSDDRLVKIWSMETA-----------RCLASCRGHSGD------------ITDLAVSSN--NTM 246 (1113)
T ss_pred heeeeeeccccceEeecCccceeeeeeccch-----------hhhccCCCCccc------------cchhccchh--hhh
Confidence 5899999999999999999999999997753 346788899854 666776543 235
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc-cc-cccc---ccc--eecc
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA-AA-LCDR---HSK--CLIE 153 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~-~~-~~~~---~~~--~~~~ 153 (400)
++++|+|..||+|.+..+. +++|++.|++++|+|- ++++.||++++||.|- .. +..+ ++. -+..
T Consensus 247 iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~-----~sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s 321 (1113)
T KOG0644|consen 247 IAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPR-----ASSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDS 321 (1113)
T ss_pred hhhcccCceEEEEecCCCchHHHHhccccceeeeccCcc-----ccCCCCCceEeccccccccccCCCCCCcccccceee
Confidence 6668999999999999987 5789999999999994 4788999999999982 21 1100 000 0000
Q ss_pred CcccceeceeccCchhhh--------hhcccCcc-----------eeecCCCCCeEEEeecccccccCcccccccCCCCC
Q psy12356 154 GTNCNCQGLIVPESKREE--------RQSSQNRR-----------EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDP 214 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~-----------~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 214 (400)
...++.+.-....+...+ ..-..++. ...++..+..+..|++.++.+.
T Consensus 322 ~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~------------- 388 (1113)
T KOG0644|consen 322 ILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLL------------- 388 (1113)
T ss_pred eeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhh-------------
Confidence 000000000000000000 00000111 1122334555666766655321
Q ss_pred CCcccccccccCeEEEEECCCCcEEE-E-ecCCeEEEEeCCCCCCceee-ecCCCcCCCCcc
Q psy12356 215 TNKSFFSEIISSISDVKISNSGRYMI-S-RDYLCVKVWDLHMESRPVET-YPTHTKEENGQL 273 (400)
Q Consensus 215 ~~~~~~~~h~~~V~~v~fSpdg~~la-s-~~D~tIklWD~~~~~~~l~~-~~~h~~~~~g~~ 273 (400)
....+|..++..+.|+|-...++ + +-||..-|||+-.+. |++. +.+|..+.+|++
T Consensus 389 ---H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~-pik~y~~gh~kl~d~kF 446 (1113)
T KOG0644|consen 389 ---HNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGI-PIKHYFIGHGKLVDGKF 446 (1113)
T ss_pred ---hhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCC-cceeeecccceeecccc
Confidence 12347888999999999777776 4 458999999999864 6665 457765556655
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.4e-13 Score=128.14 Aligned_cols=70 Identities=17% Similarity=0.262 Sum_probs=54.3
Q ss_pred EEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE
Q psy12356 7 EASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL 86 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l 86 (400)
.+|+|++||..||+|+.||++|||+..... .+.....|. ..|.++.|+||+ +++
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~-----------t~l~e~~~~------------~eV~DL~FS~dg---k~l 201 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML-----------TILEEIAHH------------AEVKDLDFSPDG---KFL 201 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcch-----------hhhhhHhhc------------CccccceeCCCC---cEE
Confidence 579999999999999999999999965321 122334454 349999999998 455
Q ss_pred E-eeCCCeEEEEEccCCC
Q psy12356 87 L-STNDQSFNIVDIKPTN 103 (400)
Q Consensus 87 ~-ss~D~tI~lWd~~~~~ 103 (400)
+ -+.| ..+||+.++|.
T Consensus 202 asig~d-~~~VW~~~~g~ 218 (398)
T KOG0771|consen 202 ASIGAD-SARVWSVNTGA 218 (398)
T ss_pred EEecCC-ceEEEEeccCc
Confidence 4 5777 99999999885
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.5e-12 Score=130.92 Aligned_cols=293 Identities=13% Similarity=0.156 Sum_probs=177.5
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
++++++||.++++|+|..||.|.||.=.+... ..+. .+.|.=|.. .|++++|+++|. .+
T Consensus 208 ~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~------~~~t-~t~lHWH~~------------~V~~L~fS~~G~--~L 266 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSDGRILVWRDFGSSD------DSET-CTLLHWHHD------------EVNSLSFSSDGA--YL 266 (792)
T ss_pred ceeEEeccccceEEEeccCCcEEEEecccccc------cccc-ceEEEeccc------------ccceeEEecCCc--eE
Confidence 68999999999999999999999997432110 1111 234554543 499999999874 78
Q ss_pred EEeeCCCeEEEEEccCCC---cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc------
Q psy12356 86 LLSTNDQSFNIVDIKPTN---MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN------ 156 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~---~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~------ 156 (400)
++|+..+.+-+|.+.+++ +..+.++|..+.++||+ .+.+..-.|+.|.+-.+.+-... ..+.++..
T Consensus 267 lSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds-~~~sl~~~DNqI~li~~~dl~~k----~tIsgi~~~~~~~k 341 (792)
T KOG1963|consen 267 LSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDS-DLYSLVLEDNQIHLIKASDLEIK----STISGIKPPTPSTK 341 (792)
T ss_pred eecccceEEEEEeecCCCcccccccCCeeEEEEEcCCC-CeEEEEecCceEEEEeccchhhh----hhccCccCCCcccc
Confidence 888999999999998876 34567889999999985 67888888999998876443211 11111110
Q ss_pred ----cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCC-CcccccccccCeEEEE
Q psy12356 157 ----CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT-NKSFFSEIISSISDVK 231 (400)
Q Consensus 157 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~V~~v~ 231 (400)
.-..++.+. |--...+=.+.-|.|++||+-+-... ..++.-+.+. ... ..+.-.+..++
T Consensus 342 ~~~~~l~t~~~id----------pr~~~~vln~~~g~vQ~ydl~td~~i----~~~~v~~~n~~~~~--~n~~v~itav~ 405 (792)
T KOG1963|consen 342 TRPQSLTTGVSID----------PRTNSLVLNGHPGHVQFYDLYTDSTI----YKLQVCDENYSDGD--VNIQVGITAVA 405 (792)
T ss_pred ccccccceeEEEc----------CCCCceeecCCCceEEEEecccccee----eeEEEEeecccCCc--ceeEEeeeeeh
Confidence 001111111 10011111236789999998764332 2221100000 000 02335688899
Q ss_pred ECCCCcEEEEec---------CC--eEEEEeCCCCCC--cee--eecCCCcC---------CCC-cccCCCCCceeecCc
Q psy12356 232 ISNSGRYMISRD---------YL--CVKVWDLHMESR--PVE--TYPTHTKE---------ENG-QLRDPSNITALRVPQ 286 (400)
Q Consensus 232 fSpdg~~las~~---------D~--tIklWD~~~~~~--~l~--~~~~h~~~---------~~g-~~~~~~~~~~i~l~~ 286 (400)
++-+|.++++.+ |+ .+|+|-.....+ -|. ..+.|... +.- ..+.++.++.+|+|.
T Consensus 406 ~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~ 485 (792)
T KOG1963|consen 406 RSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWV 485 (792)
T ss_pred hhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEE
Confidence 999999999753 32 588997664321 121 13455410 000 122356667777777
Q ss_pred ccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEecCCeEEEEeCcc
Q psy12356 287 IKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSADDLRINLWHLEI 365 (400)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~ 365 (400)
+..++.... . ...|+ |..+- .=|..++++++||.||..||.+.|++|.+||...
T Consensus 486 ~~~~~n~~k--------~-~s~W~---------------c~~i~-sy~k~~i~a~~fs~dGslla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 486 FTDDSNIYK--------K-SSNWT---------------CKAIG-SYHKTPITALCFSQDGSLLAVSFDDTITIWDYDT 539 (792)
T ss_pred EecccccCc--------C-ccceE---------------Eeeee-ccccCcccchhhcCCCcEEEEecCCEEEEecCCC
Confidence 654433211 0 01111 10000 1267789999999999999889899999999876
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-14 Score=138.99 Aligned_cols=160 Identities=19% Similarity=0.298 Sum_probs=119.9
Q ss_pred EECCCCCeEEE--ecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE
Q psy12356 10 QRFSDGELLAT--GDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL 87 (400)
Q Consensus 10 ~fspdG~~Las--~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ 87 (400)
.|..+.+++|. ++..|.|-||++.+..+- ..-++-.+..- .-|+++.|.|.. +.++++
T Consensus 586 Gfcan~~rvAVPL~g~gG~iai~el~~PGrL------PDgv~p~l~Ng-------------t~vtDl~WdPFD-~~rLAV 645 (1012)
T KOG1445|consen 586 GFCANNKRVAVPLAGSGGVIAIYELNEPGRL------PDGVMPGLFNG-------------TLVTDLHWDPFD-DERLAV 645 (1012)
T ss_pred ceeeccceEEEEecCCCceEEEEEcCCCCCC------CcccccccccC-------------ceeeecccCCCC-hHHeee
Confidence 35666777775 455799999999875421 10011122211 228899999975 357888
Q ss_pred eeCCCeEEEEEccCCCc-----------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 88 STNDQSFNIVDIKPTNM-----------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 88 ss~D~tI~lWd~~~~~~-----------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
++.|+.|+||.+..+.+ ..|...|+++.|||--.+.||+++.|-+|+|||++++++.
T Consensus 646 a~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~------------ 713 (1012)
T KOG1445|consen 646 ATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLY------------ 713 (1012)
T ss_pred cccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhh------------
Confidence 99999999999976542 2356789999999988889999999999999999887210
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
..+.+|++.|.+++|||||
T Consensus 714 -------------------------------------------------------------~~l~gHtdqIf~~AWSpdG 732 (1012)
T KOG1445|consen 714 -------------------------------------------------------------SRLVGHTDQIFGIAWSPDG 732 (1012)
T ss_pred -------------------------------------------------------------heeccCcCceeEEEECCCC
Confidence 1134788999999999999
Q ss_pred cEEEE-ecCCeEEEEeCCCCCCceeee
Q psy12356 237 RYMIS-RDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 237 ~~las-~~D~tIklWD~~~~~~~l~~~ 262 (400)
+.+|+ +.|++||++.-+.+..++++=
T Consensus 733 r~~AtVcKDg~~rVy~Prs~e~pv~Eg 759 (1012)
T KOG1445|consen 733 RRIATVCKDGTLRVYEPRSREQPVYEG 759 (1012)
T ss_pred cceeeeecCceEEEeCCCCCCCccccC
Confidence 99998 579999999999876666543
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=5e-14 Score=130.96 Aligned_cols=114 Identities=20% Similarity=0.339 Sum_probs=91.3
Q ss_pred eEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|-.++||| ....+||||-||+|+|||+..+. +.-+ + ....|..+ |+.|.|+...+
T Consensus 259 SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~-----~~~~---~-~~kAh~sD------------VNVISWnr~~~-- 315 (440)
T KOG0302|consen 259 SVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGP-----KKAA---V-STKAHNSD------------VNVISWNRREP-- 315 (440)
T ss_pred chhhhccCCccCceEEeeecCceEEEEEecCCC-----ccce---e-EeeccCCc------------eeeEEccCCcc--
Confidence 466789999 45699999999999999987542 1111 2 22677654 99999997653
Q ss_pred eEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+++++.||+++|||++.-+ ++.|..+|++|.|||.....|+.+|.|.+|-|||+.-.
T Consensus 316 lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 316 LLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVE 380 (440)
T ss_pred eeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeecc
Confidence 56667889999999997543 45688999999999998889999999999999999765
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.8e-13 Score=127.40 Aligned_cols=197 Identities=16% Similarity=0.240 Sum_probs=128.4
Q ss_pred EEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 7 EASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 7 ~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
.+++|.- --+.|||||.|.+|++||+++++ +.+++..|+ ++|.+++|+|..+ ..+
T Consensus 247 l~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~-----------p~~s~~~~~------------k~Vq~l~wh~~~p-~~L 302 (463)
T KOG0270|consen 247 LALSWNRNFRNVLASGSADKTVKLWDVDTGK-----------PKSSITHHG------------KKVQTLEWHPYEP-SVL 302 (463)
T ss_pred HHHHhccccceeEEecCCCceEEEEEcCCCC-----------cceehhhcC------------CceeEEEecCCCc-eEE
Confidence 3445543 34689999999999999999753 345666665 5699999999864 356
Q ss_pred EEeeCCCeEEEEEccCCC-c-c--cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc--cce
Q psy12356 86 LLSTNDQSFNIVDIKPTN-M-E--ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN--CNC 159 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~-~-~--~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~--~~~ 159 (400)
|++|.|++|+|.|.+.-. . . ...+.|-.++|+|.....|+.+..||+++-+|+|... +++.++.. ..+
T Consensus 303 LsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~------~~vwt~~AHd~~I 376 (463)
T KOG0270|consen 303 LSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG------KPVWTLKAHDDEI 376 (463)
T ss_pred EeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCC------CceeEEEeccCCc
Confidence 678899999999997422 1 1 2346788999999888888999999999999999873 12222211 011
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE-
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY- 238 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~- 238 (400)
.++.++. ..|. ..++++.|++++||++..... +....+.+ .-+...|.++.|+--.
T Consensus 377 Sgl~~n~-------~~p~--~l~t~s~d~~Vklw~~~~~~~-----~~v~~~~~---------~~~rl~c~~~~~~~a~~ 433 (463)
T KOG0270|consen 377 SGLSVNI-------QTPG--LLSTASTDKVVKLWKFDVDSP-----KSVKEHSF---------KLGRLHCFALDPDVAFT 433 (463)
T ss_pred ceEEecC-------CCCc--ceeeccccceEEEEeecCCCC-----cccccccc---------cccceeecccCCCcceE
Confidence 2222211 0122 244567899999999865321 11111110 0133566777787554
Q ss_pred EEEe-cCCeEEEEeCCCCC
Q psy12356 239 MISR-DYLCVKVWDLHMES 256 (400)
Q Consensus 239 las~-~D~tIklWD~~~~~ 256 (400)
||.+ ..+.++|||+.+..
T Consensus 434 la~GG~k~~~~vwd~~~~~ 452 (463)
T KOG0270|consen 434 LAFGGEKAVLRVWDIFTNS 452 (463)
T ss_pred EEecCccceEEEeecccCh
Confidence 4434 45679999999753
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.6e-13 Score=129.97 Aligned_cols=199 Identities=17% Similarity=0.250 Sum_probs=141.5
Q ss_pred CCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCC
Q psy12356 12 FSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTND 91 (400)
Q Consensus 12 spdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D 91 (400)
...+.|+++|+..+.|+|||+... .+.+.+++|+ ..|++|.++-. |..+++.+..
T Consensus 88 ~s~S~y~~sgG~~~~Vkiwdl~~k-----------l~hr~lkdh~------------stvt~v~YN~~--DeyiAsvs~g 142 (673)
T KOG4378|consen 88 ASQSLYEISGGQSGCVKIWDLRAK-----------LIHRFLKDHQ------------STVTYVDYNNT--DEYIASVSDG 142 (673)
T ss_pred hhcceeeeccCcCceeeehhhHHH-----------HHhhhccCCc------------ceeEEEEecCC--cceeEEeccC
Confidence 334489999999999999999731 2345667887 45999998753 4577777888
Q ss_pred CeEEEEEccCCCcc---cc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccC
Q psy12356 92 QSFNIVDIKPTNME---EL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPE 166 (400)
Q Consensus 92 ~tI~lWd~~~~~~~---~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (400)
|.|.|-.++++.-. .+ ...|+-+.|||....+|.++|.+|+|.|||+....-...+.. . + ...+.++.|
T Consensus 143 Gdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~-~--H-sAP~~gicf-- 216 (673)
T KOG4378|consen 143 GDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASE-A--H-SAPCRGICF-- 216 (673)
T ss_pred CcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhh-h--c-cCCcCccee--
Confidence 99999999887621 12 346788999998777888999999999999987632110000 0 0 011222233
Q ss_pred chhhhhhcccC-cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cC
Q psy12356 167 SKREERQSSQN-RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DY 244 (400)
Q Consensus 167 ~~~~~~~~~~~-~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D 244 (400)
+|. -...++-+.|..|.+||++..+..+.. ....+...|+|+|+|.+|+.+ ..
T Consensus 217 --------spsne~l~vsVG~Dkki~~yD~~s~~s~~~l-----------------~y~~Plstvaf~~~G~~L~aG~s~ 271 (673)
T KOG4378|consen 217 --------SPSNEALLVSVGYDKKINIYDIRSQASTDRL-----------------TYSHPLSTVAFSECGTYLCAGNSK 271 (673)
T ss_pred --------cCCccceEEEecccceEEEeeccccccccee-----------------eecCCcceeeecCCceEEEeecCC
Confidence 232 234555568999999999965543221 112468899999999999976 57
Q ss_pred CeEEEEeCCCCCCceeeecCCC
Q psy12356 245 LCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 245 ~tIklWD~~~~~~~l~~~~~h~ 266 (400)
|.|..||++....|++...+|.
T Consensus 272 G~~i~YD~R~~k~Pv~v~sah~ 293 (673)
T KOG4378|consen 272 GELIAYDMRSTKAPVAVRSAHD 293 (673)
T ss_pred ceEEEEecccCCCCceEeeecc
Confidence 9999999999888999998885
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-12 Score=123.64 Aligned_cols=156 Identities=14% Similarity=0.138 Sum_probs=103.1
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.+.|++|.|+|.-.+|.+|+.||+++||.++...+. .++.+ |-. ...|.+.+|.|+|.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~---------~lqS~--~l~----------~fPi~~a~f~p~G~- 270 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNP---------KLQSI--HLE----------KFPIQKAEFAPNGH- 270 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccCh---------hheee--eec----------cCccceeeecCCCc-
Confidence 467999999999999999999999999999864321 11111 100 01256677777653
Q ss_pred ceEEEeeCCCeEEEEEccCCCcc------------------------------------------------cccccEEEE
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNME------------------------------------------------ELNEVITAA 114 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~------------------------------------------------~~~~~V~sv 114 (400)
.++++++.-.-+..||+.+.+.. .+.+.|.++
T Consensus 271 ~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~ 350 (514)
T KOG2055|consen 271 SVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDF 350 (514)
T ss_pred eEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeE
Confidence 24555666777777777654310 012458899
Q ss_pred EEecCCCCEEEEEeCCCeEEEEeccccccccccc--ceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEE
Q psy12356 115 EFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHS--KCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRL 192 (400)
Q Consensus 115 ~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~l 192 (400)
.|+.++ ..|+.++.+|.|.+||++.....+++. +++. ... +..++++...|+|+..|.|.|
T Consensus 351 ~fsSds-k~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~------gts----------~~~S~ng~ylA~GS~~GiVNI 413 (514)
T KOG2055|consen 351 TFSSDS-KELLASGGTGEVYVWNLRQNSCLHRFVDDGSVH------GTS----------LCISLNGSYLATGSDSGIVNI 413 (514)
T ss_pred EEecCC-cEEEEEcCCceEEEEecCCcceEEEEeecCccc------eee----------eeecCCCceEEeccCcceEEE
Confidence 999986 677778889999999999984333211 1110 011 123456667888899999999
Q ss_pred eeccc
Q psy12356 193 CDMRA 197 (400)
Q Consensus 193 WD~~~ 197 (400)
||..+
T Consensus 414 Yd~~s 418 (514)
T KOG2055|consen 414 YDGNS 418 (514)
T ss_pred eccch
Confidence 99544
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.5e-12 Score=124.84 Aligned_cols=197 Identities=11% Similarity=0.070 Sum_probs=126.9
Q ss_pred EEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
|.++.|+.... .+|+-+.|..|++|.-.+.. ++-..+....+..+ ..|.++.++ ..
T Consensus 37 ~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~-------~~Vp~~~k~~gd~~-----------~Cv~~~s~S-----~y 93 (673)
T KOG4378|consen 37 DFSFNWQRRNFLVVASMAGDKVMRIKEKDGKT-------PEVPRVRKLTGDNA-----------FCVACASQS-----LY 93 (673)
T ss_pred ceeeeccccceEEEeecCCceeEEEecccCCC-------CccceeeccccchH-----------HHHhhhhcc-----ee
Confidence 66788877663 33455678899999876531 12222333333322 124444444 14
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++++-.++|+|||++... ++.|+..|++|.++-.+ .+||+++..|-|-|-.+.++.-..++. ...+....
T Consensus 94 ~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~D-eyiAsvs~gGdiiih~~~t~~~tt~f~----~~sgqsvR 168 (673)
T KOG4378|consen 94 EISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTD-EYIASVSDGGDIIIHGTKTKQKTTTFT----IDSGQSVR 168 (673)
T ss_pred eeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCc-ceeEEeccCCcEEEEecccCcccccee----cCCCCeEE
Confidence 5556779999999998543 46788999999999875 689999999999999998873211110 00011111
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc-EE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR-YM 239 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~-~l 239 (400)
-+.++ ...+....+++.+|+|.|||+....-. + +....|..+...|+|||... +|
T Consensus 169 ll~ys---------~skr~lL~~asd~G~VtlwDv~g~sp~------~---------~~~~~HsAP~~gicfspsne~l~ 224 (673)
T KOG4378|consen 169 LLRYS---------PSKRFLLSIASDKGAVTLWDVQGMSPI------F---------HASEAHSAPCRGICFSPSNEALL 224 (673)
T ss_pred Eeecc---------cccceeeEeeccCCeEEEEeccCCCcc------c---------chhhhccCCcCcceecCCccceE
Confidence 12222 123445667778999999999854321 1 11246888999999999665 55
Q ss_pred EE-ecCCeEEEEeCCC
Q psy12356 240 IS-RDYLCVKVWDLHM 254 (400)
Q Consensus 240 as-~~D~tIklWD~~~ 254 (400)
++ +-|+.|.++|++.
T Consensus 225 vsVG~Dkki~~yD~~s 240 (673)
T KOG4378|consen 225 VSVGYDKKINIYDIRS 240 (673)
T ss_pred EEecccceEEEeeccc
Confidence 56 4599999999984
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=122.77 Aligned_cols=123 Identities=17% Similarity=0.337 Sum_probs=94.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCcc-----ccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKT-----SIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~-----~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
.+|++|+|+|+|++||||+.+|.|.+|........ +......+...+.+.+|..+ |..++|+|
T Consensus 66 ~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~d------------iydL~Ws~ 133 (434)
T KOG1009|consen 66 RAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDD------------IYDLAWSP 133 (434)
T ss_pred ceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccc------------hhhhhccC
Confidence 47999999999999999999999999987631110 00001224456677788744 88999999
Q ss_pred ccCCceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 79 RKNQAHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 79 ~~~~~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+++ .+++++.|+++++||+..|++ ..|...|..++|.|-+ +.+++-|.|...+...+...
T Consensus 134 d~~--~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~-qyv~s~s~dr~~~~~~~~~~ 197 (434)
T KOG1009|consen 134 DSN--FLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLN-QYVASKSSDRHPEGFSAKLK 197 (434)
T ss_pred CCc--eeeeeeccceEEEEEeccceeEeeccccccccceeecchhh-hhhhhhccCcccceeeeeee
Confidence 874 555678899999999999883 4577789999999974 78999999987666666554
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.7e-13 Score=127.53 Aligned_cols=197 Identities=18% Similarity=0.237 Sum_probs=133.8
Q ss_pred CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeE
Q psy12356 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSF 94 (400)
Q Consensus 15 G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI 94 (400)
...++.++.||++.|-+... ++.+...+|..+ |.+-+|+|||. -+++++.||.|
T Consensus 75 ~d~~~i~s~DGkf~il~k~~------------rVE~sv~AH~~A------------~~~gRW~~dGt--gLlt~GEDG~i 128 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNKSA------------RVERSISAHAAA------------ISSGRWSPDGA--GLLTAGEDGVI 128 (737)
T ss_pred cceEEEEcCCceEEEecccc------------hhhhhhhhhhhh------------hhhcccCCCCc--eeeeecCCceE
Confidence 35788889999999988653 233455677654 77789999985 68889999999
Q ss_pred EEEEccCCCcc----cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhh
Q psy12356 95 NIVDIKPTNME----ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKRE 170 (400)
Q Consensus 95 ~lWd~~~~~~~----~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (400)
|+|.- +|.++ .....|.+++|.|+..+ ++.+-.+. +.|=-+..+
T Consensus 129 KiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~-vl~c~g~h-~~IKpL~~n----------------------------- 176 (737)
T KOG1524|consen 129 KIWSR-SGMLRSTVVQNEESIRCARWAPNSNS-IVFCQGGH-ISIKPLAAN----------------------------- 176 (737)
T ss_pred EEEec-cchHHHHHhhcCceeEEEEECCCCCc-eEEecCCe-EEEeecccc-----------------------------
Confidence 99984 55543 23467999999998744 45543322 111001000
Q ss_pred hhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEE
Q psy12356 171 ERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKV 249 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIkl 249 (400)
..+-- ...|.+-|.++.|+|...+++++ .|-..||
T Consensus 177 -----------------~k~i~---------------------------WkAHDGiiL~~~W~~~s~lI~sgGED~kfKv 212 (737)
T KOG1524|consen 177 -----------------SKIIR---------------------------WRAHDGLVLSLSWSTQSNIIASGGEDFRFKI 212 (737)
T ss_pred -----------------cceeE---------------------------EeccCcEEEEeecCccccceeecCCceeEEe
Confidence 00111 12577889999999999999985 6899999
Q ss_pred EeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccch
Q psy12356 250 WDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGI 329 (400)
Q Consensus 250 WD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~ 329 (400)
||... .+|-+ ..+|++.|++++|+|| +.++..+-++
T Consensus 213 WD~~G--~~Lf~-----------------------------------------S~~~ey~ITSva~npd-~~~~v~S~nt 248 (737)
T KOG1524|consen 213 WDAQG--ANLFT-----------------------------------------SAAEEYAITSVAFNPE-KDYLLWSYNT 248 (737)
T ss_pred ecccC--ccccc-----------------------------------------CChhccceeeeeeccc-cceeeeeeee
Confidence 99983 34321 1357888999999999 5444322211
Q ss_pred --hhcccccceeEEEEccCCCEEEEe-cCCe
Q psy12356 330 --FADAHTYHISSTSVNSDQETYLSA-DDLR 357 (400)
Q Consensus 330 --~~~gh~~~V~~i~fspDg~~las~-~D~~ 357 (400)
+..-..+.|..++|||||.+++.+ ..|-
T Consensus 249 ~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G~ 279 (737)
T KOG1524|consen 249 ARFSSPRVGSIFNLSWSADGTQATCGTSTGQ 279 (737)
T ss_pred eeecCCCccceEEEEEcCCCceeeccccCce
Confidence 223456789999999999999986 4554
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.8e-13 Score=127.54 Aligned_cols=312 Identities=13% Similarity=0.157 Sum_probs=187.6
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.|-|+.|.|...|..|+|||.|..|.+||-.... ..++-..||... |....|-|...+
T Consensus 142 ~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~----------~~l~f~SGH~~N------------vfQaKFiP~s~d 199 (559)
T KOG1334|consen 142 KGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGS----------PKLSFESGHCNN------------VFQAKFIPFSGD 199 (559)
T ss_pred CCccceeeecccCceeeccCccceEEeehhhccC----------cccccccccccc------------hhhhhccCCCCC
Confidence 3678999999999999999999999999966432 112222467533 555668888766
Q ss_pred ceEEEeeCCCeEEEEEccC-CC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 83 AHFLLSTNDQSFNIVDIKP-TN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~-~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
..++.++.||.+|+=.+.. +. +..|.+.|.-++.-|+....|.|++.|+.++-.|++.+.--..+. |.....
T Consensus 200 ~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~-cr~~~~ 278 (559)
T KOG1334|consen 200 RTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV-CREADE 278 (559)
T ss_pred cCceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceee-eeccCC
Confidence 6778889999999977643 32 234677888888889888899999999999999999873211100 111000
Q ss_pred c--cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccC--cccccccCCCCCCCcccccccccCeEEEE
Q psy12356 156 N--CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCD--RHSKFFEEPEDPTNKSFFSEIISSISDVK 231 (400)
Q Consensus 156 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 231 (400)
. ...+.+.+.+ .+....+.++.|.-.|+||.|.-.... +.+..|-.+ .......-.|++++
T Consensus 279 ~~~v~L~~Ia~~P---------~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~------hl~~d~~v~ITgl~ 343 (559)
T KOG1334|consen 279 KERVGLYTIAVDP---------RNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPH------HLVEDDPVNITGLV 343 (559)
T ss_pred ccceeeeeEecCC---------CCccccccCChhhhhhhhcccchhhccccchhhhcCCc------cccccCcccceeEE
Confidence 0 0001111110 112234566789999999988643211 001111100 00111123589999
Q ss_pred ECCCCc-EEEEecCCeEEEEeCCCCCC-----------ceee-ecCCCcCCCCcccCCCCCceeecCcccc--cceeecc
Q psy12356 232 ISNSGR-YMISRDYLCVKVWDLHMESR-----------PVET-YPTHTKEENGQLRDPSNITALRVPQIKP--IELTVEA 296 (400)
Q Consensus 232 fSpdg~-~las~~D~tIklWD~~~~~~-----------~l~~-~~~h~~~~~g~~~~~~~~~~i~l~~~~~--~~~~~~~ 296 (400)
||.++. +||+-+|--|.|+.-..+.- .++. |.||-+. .+||=-+|+. .+-.++|
T Consensus 344 Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~-----------~TVKgVNFfGPrsEyVvSG 412 (559)
T KOG1334|consen 344 YSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNS-----------RTVKGVNFFGPRSEYVVSG 412 (559)
T ss_pred ecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccc-----------cccceeeeccCccceEEec
Confidence 997655 66777899999995444311 1122 5666432 2344334543 2223332
Q ss_pred -CccceeccccccceEEEEEcCCCcEEeecccc-hhhcccccceeEEEEccCCCEEEEec-CCeEEEEeCccCCeeEEEE
Q psy12356 297 -SPRRIFANAHTYHINSISVNSDQLTVEASPRG-IFADAHTYHISSTSVNSDQETYLSAD-DLRINLWHLEITDQSFNIV 373 (400)
Q Consensus 297 -~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~-~~~~gh~~~V~~i~fspDg~~las~~-D~~i~lW~~~~~~~~~~~~ 373 (400)
.|+.+|.|.- ..+.. .+..|...-||||-=+|--..|||++ |.-||||...+.++.
T Consensus 413 SDCGhIFiW~K-----------------~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er~---- 471 (559)
T KOG1334|consen 413 SDCGHIFIWDK-----------------KTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAERA---- 471 (559)
T ss_pred CccceEEEEec-----------------chhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCccccc----
Confidence 3555544310 00110 11134444899999999999999975 888999987665544
Q ss_pred eecCCcccchhh
Q psy12356 374 DIKPTNMEELNE 385 (400)
Q Consensus 374 ~~~~~~~~~~~~ 385 (400)
..|++++++++
T Consensus 472 -~~~~~lk~vi~ 482 (559)
T KOG1334|consen 472 -TEPTLLKQVIK 482 (559)
T ss_pred -cChhhHHHHHh
Confidence 44555555554
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.4e-11 Score=115.51 Aligned_cols=241 Identities=22% Similarity=0.309 Sum_probs=155.5
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEE-EeccCC
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW-LRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~-sp~~~~ 82 (400)
..|.++.|.+++..++.++.|+.+.+|+..... ..+..+.++.. ..+..+.+ ++++.
T Consensus 66 ~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----------~~~~~~~~~~~-----------~~~~~~~~~~~~~~- 123 (466)
T COG2319 66 DSITSIAFSPDGELLLSGSSDGTIKLWDLDNGE----------KLIKSLEGLHD-----------SSVSKLALSSPDGN- 123 (466)
T ss_pred ceEEEEEECCCCcEEEEecCCCcEEEEEcCCCc----------eeEEEEeccCC-----------CceeeEEEECCCcc-
Confidence 468899999999999999999999999987531 12334444321 12455555 55442
Q ss_pred ceEEEee-CCCeEEEEEccC-CC----cccccccEEEEEEecCCCCEEEEEeC-CCeEEEEecccccccccccceeccCc
Q psy12356 83 AHFLLST-NDQSFNIVDIKP-TN----MEELNEVITAAEFHPIDCNLFVYSSS-KGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 83 ~~~l~ss-~D~tI~lWd~~~-~~----~~~~~~~V~sv~f~p~~~~~las~s~-Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
..++..+ .|+.+++||... .. +..|...|..++|+|++ ..+++++. |+.+++|++..+........+
T Consensus 124 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 197 (466)
T COG2319 124 SILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDG-KLLASGSSLDGTIKLWDLRTGKPLSTLAGH----- 197 (466)
T ss_pred eEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCC-CEEEecCCCCCceEEEEcCCCceEEeeccC-----
Confidence 1233334 499999999986 33 34567789999999986 57788875 999999999875322111110
Q ss_pred ccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
...+..+. ..+++. ...+.+.|+.|++||.+.+..... .+.+|...+ -..|+|
T Consensus 198 ~~~v~~~~----------~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~---------------~~~~~~~~~-~~~~~~ 251 (466)
T COG2319 198 TDPVSSLA----------FSPDGGLLIASGSSDGTIRLWDLSTGKLLRS---------------TLSGHSDSV-VSSFSP 251 (466)
T ss_pred CCceEEEE----------EcCCcceEEEEecCCCcEEEEECCCCcEEee---------------ecCCCCcce-eEeECC
Confidence 00111111 123332 344456899999998874432210 123455554 338999
Q ss_pred CCcEEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEE
Q psy12356 235 SGRYMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSI 313 (400)
Q Consensus 235 dg~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 313 (400)
++.++++ +.|+++++||++....++..+
T Consensus 252 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--------------------------------------------------- 280 (466)
T COG2319 252 DGSLLASGSSDGTIRLWDLRSSSSLLRTL--------------------------------------------------- 280 (466)
T ss_pred CCCEEEEecCCCcEEEeeecCCCcEEEEE---------------------------------------------------
Confidence 9977775 579999999998643201000
Q ss_pred EEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 314 SVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 314 ~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
.+|...|.++.|+|++..++++ .|+++++|+.....
T Consensus 281 ------------------~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 317 (466)
T COG2319 281 ------------------SGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGK 317 (466)
T ss_pred ------------------ecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCc
Confidence 1355667788899988888885 47789999876544
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=8.5e-13 Score=129.68 Aligned_cols=119 Identities=16% Similarity=0.243 Sum_probs=98.2
Q ss_pred eEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|+.+.|.| |..+||.+..||.|+||.+..+.... ....+...+.+|. ++|.+++|+|--. .
T Consensus 629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e----~~~tPe~~lt~h~------------eKI~slRfHPLAa-d 691 (1012)
T KOG1445|consen 629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPE----NEMTPEKILTIHG------------EKITSLRFHPLAA-D 691 (1012)
T ss_pred eeeecccCCCChHHeeecccCceEEEEEeccCCCCc----ccCCcceeeeccc------------ceEEEEEecchhh-h
Confidence 588999999 88999999999999999987654211 1222344667776 6799999999653 3
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+++++.|.||+|||+.+.. +.+|++.|-+++|+|+| +++|+.+.||+|+++..+.+
T Consensus 692 vLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdG-r~~AtVcKDg~~rVy~Prs~ 752 (1012)
T KOG1445|consen 692 VLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDG-RRIATVCKDGTLRVYEPRSR 752 (1012)
T ss_pred HhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCC-cceeeeecCceEEEeCCCCC
Confidence 67778999999999998875 56899999999999985 78999999999999999887
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-12 Score=127.24 Aligned_cols=254 Identities=13% Similarity=0.127 Sum_probs=160.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
-|+.++|-|||..|+.+. +.++.|||.+++. .+.++++|. ..|++|+|+.+|. +
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~-----------llqtLKgHK------------DtVycVAys~dGk--r 67 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGT-----------LLQPLKGHK------------DTVYCVAYAKDGK--R 67 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcc-----------ccccccccc------------ceEEEEEEccCCc--e
Confidence 378999999999888776 5579999998753 367889998 4599999999875 7
Q ss_pred EEEeeCCCeEEEEEccC-CCc-ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceece
Q psy12356 85 FLLSTNDQSFNIVDIKP-TNM-EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGL 162 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~-~~~-~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (400)
+++++.|+.|.||.-+- |.+ ..|+..|.+++|+|-. ..++|++... .-+|........+ +.... ...++.|.
T Consensus 68 FASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~-h~LasCsLsd-FglWS~~qK~V~K-~kss~--R~~~CsWt- 141 (1081)
T KOG1538|consen 68 FASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPIT-HQLASCSLSD-FGLWSPEQKSVSK-HKSSS--RIICCSWT- 141 (1081)
T ss_pred eccCCCceeEEEecccccceeeeccCCeeeEeecCchH-HHhhhcchhh-ccccChhhhhHHh-hhhhe--eEEEeeec-
Confidence 88889999999998653 333 3578899999999985 6789988743 5688877653321 10000 00112222
Q ss_pred eccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc-----
Q psy12356 163 IVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR----- 237 (400)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~----- 237 (400)
.++...+-|-.+|+|.|-+.... . ....+.|. |...+|.+|+|+|...
T Consensus 142 -------------nDGqylalG~~nGTIsiRNk~gE----e-k~~I~Rpg---------g~Nspiwsi~~~p~sg~G~~d 194 (1081)
T KOG1538|consen 142 -------------NDGQYLALGMFNGTISIRNKNGE----E-KVKIERPG---------GSNSPIWSICWNPSSGEGRND 194 (1081)
T ss_pred -------------CCCcEEEEeccCceEEeecCCCC----c-ceEEeCCC---------CCCCCceEEEecCCCCCCccc
Confidence 23444444446888877543211 0 01112222 4457899999999743
Q ss_pred EEEEe-cCCeEEEEeCCCCCCcee-----eecCC--CcCCCCccc-CCCCCceeecCcccccceeeccCccceecccccc
Q psy12356 238 YMISR-DYLCVKVWDLHMESRPVE-----TYPTH--TKEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTY 308 (400)
Q Consensus 238 ~las~-~D~tIklWD~~~~~~~l~-----~~~~h--~~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~ 308 (400)
+++-. ..+|+-.+.+... .+. .|..| ++-+||.|+ .++.++.+++..- + |....+. ...+.
T Consensus 195 i~aV~DW~qTLSFy~LsG~--~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR---~----GvrLGTv-g~~D~ 264 (1081)
T KOG1538|consen 195 ILAVADWGQTLSFYQLSGK--QIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTR---D----GVRLGTV-GEQDS 264 (1081)
T ss_pred eEEEEeccceeEEEEecce--eecccccCCCCchhheeccCCcEEEEccCCCceEEEee---c----CeEEeec-cccce
Confidence 44433 4678888877632 121 23344 456788874 4566666654221 1 1111111 23566
Q ss_pred ceEEEEEcCCCcEEeeccc
Q psy12356 309 HINSISVNSDQLTVEASPR 327 (400)
Q Consensus 309 ~i~~i~~s~dg~~~~~~~~ 327 (400)
|||+++..|+|++.+..|+
T Consensus 265 WIWtV~~~PNsQ~v~~GCq 283 (1081)
T KOG1538|consen 265 WIWTVQAKPNSQYVVVGCQ 283 (1081)
T ss_pred eEEEEEEccCCceEEEEEc
Confidence 8999999999888775543
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.1e-10 Score=110.73 Aligned_cols=297 Identities=20% Similarity=0.291 Sum_probs=181.9
Q ss_pred eEEEEEE-CCCCC-eEEEecC-CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQR-FSDGE-LLATGDK-GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~f-spdG~-~Las~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+..+.+ ++++. +++..+. |+.+++|+.... ......+..|. ..|..+.|+|++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----------~~~~~~~~~~~------------~~v~~~~~~~~~~ 168 (466)
T COG2319 111 SVSKLALSSPDGNSILLASSSLDGTVKLWDLSTP----------GKLIRTLEGHS------------ESVTSLAFSPDGK 168 (466)
T ss_pred ceeeEEEECCCcceEEeccCCCCccEEEEEecCC----------CeEEEEEecCc------------ccEEEEEECCCCC
Confidence 3555566 88998 5665455 999999999741 12345667776 3488999999874
Q ss_pred CceEEEeeC-CCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 82 QAHFLLSTN-DQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 82 ~~~~l~ss~-D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.+++++. |+.+++|++..+. +..|...|.+++|+|++..++++++.|++|++||...+..... .+.....
T Consensus 169 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~---~~~~~~~ 243 (466)
T COG2319 169 --LLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRS---TLSGHSD 243 (466)
T ss_pred --EEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEee---ecCCCCc
Confidence 4555664 9999999998744 2346678999999998643566668999999998885533220 0000000
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
.. .. .+.+++.....++.|+.+++||++..... ... +.+|...|.++.|+|++
T Consensus 244 ~~-~~-----------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~------------~~~~~~~v~~~~~~~~~ 296 (466)
T COG2319 244 SV-VS-----------SFSPDGSLLASGSSDGTIRLWDLRSSSSL---LRT------------LSGHSSSVLSVAFSPDG 296 (466)
T ss_pred ce-eE-----------eECCCCCEEEEecCCCcEEEeeecCCCcE---EEE------------EecCCccEEEEEECCCC
Confidence 00 00 12234333346678999999999865420 011 12566789999999988
Q ss_pred cEEEE-ecCCeEEEEeCCCCCCceeeec--CCCc-------CCCCc-ccCC-CCCceeecCcccccceeeccCccceecc
Q psy12356 237 RYMIS-RDYLCVKVWDLHMESRPVETYP--THTK-------EENGQ-LRDP-SNITALRVPQIKPIELTVEASPRRIFAN 304 (400)
Q Consensus 237 ~~las-~~D~tIklWD~~~~~~~l~~~~--~h~~-------~~~g~-~~~~-~~~~~i~l~~~~~~~~~~~~~~~~~~~~ 304 (400)
..+++ +.|+++++||..+... ..... +|.. .+++. +... ..+..+++|+...... ....
T Consensus 297 ~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--------~~~~ 367 (466)
T COG2319 297 KLLASGSSDGTVRLWDLETGKL-LSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKP--------LKTL 367 (466)
T ss_pred CEEEEeeCCCcEEEEEcCCCce-EEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCce--------eEEe
Confidence 88876 4578899999987642 22322 4532 11111 1111 3445666565433220 0000
Q ss_pred ccccceEEEEEcCCCcEEee-ccc----chh----------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 305 AHTYHINSISVNSDQLTVEA-SPR----GIF----------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 305 ~~~~~i~~i~~s~dg~~~~~-~~~----~~~----------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
.....+..+.+++ .....+ ... ..+ ...+...+....+++++..++++ .++++++|+...
T Consensus 368 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 368 EGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred cCCceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence 0111167777777 433322 110 000 01221788899999999999986 689999999876
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.1e-11 Score=114.32 Aligned_cols=190 Identities=14% Similarity=0.150 Sum_probs=124.1
Q ss_pred CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEE
Q psy12356 16 ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFN 95 (400)
Q Consensus 16 ~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~ 95 (400)
..+|++-..|+|+|||..++ +.+..|++|.+. ++.++|..+.....+++++.||+||
T Consensus 41 ~~vav~lSngsv~lyd~~tg-----------~~l~~fk~~~~~------------~N~vrf~~~ds~h~v~s~ssDG~Vr 97 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTG-----------QLLEEFKGPPAT------------TNGVRFISCDSPHGVISCSSDGTVR 97 (376)
T ss_pred eeEEEEecCCeEEEEeccch-----------hhhheecCCCCc------------ccceEEecCCCCCeeEEeccCCeEE
Confidence 46888888999999998764 245677887643 7788887653223566788999999
Q ss_pred EEEccCCCc------cccc-ccEEEEEEecCCCCEEEEEe----CCCeEEEEecccccc-cccccceeccCcccceecee
Q psy12356 96 IVDIKPTNM------EELN-EVITAAEFHPIDCNLFVYSS----SKGTIRLCDMRAAAL-CDRHSKCLIEGTNCNCQGLI 163 (400)
Q Consensus 96 lWd~~~~~~------~~~~-~~V~sv~f~p~~~~~las~s----~Dg~i~lWD~~~~~~-~~~~~~~~~~~~~~~~~~~~ 163 (400)
+||++...- ..+. .+..+++.+-. +++++.|. .|..|.+||+|...+ ++...... ...+..+.
T Consensus 98 ~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck-~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH----~DDVT~lr 172 (376)
T KOG1188|consen 98 LWDIRSQAESARISWTQQSGTPFICLDLNCK-KNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESH----NDDVTQLR 172 (376)
T ss_pred EEEeecchhhhheeccCCCCCcceEeeccCc-CCeEEeccccccCceEEEEEEeccccchhhhhhhhc----cCcceeEE
Confidence 999987541 1122 34566666655 46778775 377999999999854 22110000 00111222
Q ss_pred ccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC--cEEE
Q psy12356 164 VPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG--RYMI 240 (400)
Q Consensus 164 ~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg--~~la 240 (400)
+.|.. ..+.+|+.||.|.|+|+..-...+... +. ..|..+|..+.|+.++ ++..
T Consensus 173 ----------FHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~------------~v-iN~~sSI~~igw~~~~ykrI~c 229 (376)
T KOG1188|consen 173 ----------FHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALL------------HV-INHGSSIHLIGWLSKKYKRIMC 229 (376)
T ss_pred ----------ecCCCCCeEEeecccceEEeeecCCCcchhhHH------------Hh-hcccceeeeeeeecCCcceEEE
Confidence 22322 346677889999999998643222211 11 1455789999999998 5444
Q ss_pred EecCCeEEEEeCCCCC
Q psy12356 241 SRDYLCVKVWDLHMES 256 (400)
Q Consensus 241 s~~D~tIklWD~~~~~ 256 (400)
-+...+..+|++..+.
T Consensus 230 lTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 230 LTHMETFAIYELEDGS 245 (376)
T ss_pred EEccCceeEEEccCCC
Confidence 4678899999999874
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-11 Score=128.03 Aligned_cols=281 Identities=14% Similarity=0.179 Sum_probs=164.6
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
...+.|+|-...|++++..-+|+|||-++++ .+..|..+... ..+|..+.+-.+.....+
T Consensus 1067 pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~-----------~l~~F~n~~~~---------~t~Vs~l~liNe~D~aLl 1126 (1387)
T KOG1517|consen 1067 PKTLKFHPFEPQIAAADDRERIRVWDWEKGR-----------LLNGFDNGAFP---------DTRVSDLELINEQDDALL 1126 (1387)
T ss_pred CceeeecCCCceeEEcCCcceEEEEecccCc-----------eeccccCCCCC---------CCccceeeeecccchhhe
Confidence 3568899999999999888899999988643 24445444322 245888888765544567
Q ss_pred EEeeCCCeEEEEEc-cCC--C--cc----ccc-------ccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccc
Q psy12356 86 LLSTNDQSFNIVDI-KPT--N--ME----ELN-------EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSK 149 (400)
Q Consensus 86 l~ss~D~tI~lWd~-~~~--~--~~----~~~-------~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~ 149 (400)
++++.||.||||+- .++ . +. .+. +.-.=+.|....+ .|+++|.-..|||||+.....+..
T Consensus 1127 Ltas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G-~Ll~tGd~r~IRIWDa~~E~~~~d--- 1202 (1387)
T KOG1517|consen 1127 LTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSG-HLLVTGDVRSIRIWDAHKEQVVAD--- 1202 (1387)
T ss_pred eeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCC-eEEecCCeeEEEEEecccceeEee---
Confidence 78999999999973 222 1 11 110 1112245666554 455566678999999988743211
Q ss_pred eeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccC--e
Q psy12356 150 CLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISS--I 227 (400)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--V 227 (400)
+-...++.+..+... ...+...+.|-.||.+|+||.|.... +..+.. ...|+.. |
T Consensus 1203 -iP~~s~t~vTaLS~~---------~~~gn~i~AGfaDGsvRvyD~R~a~~-ds~v~~------------~R~h~~~~~I 1259 (1387)
T KOG1517|consen 1203 -IPYGSSTLVTALSAD---------LVHGNIIAAGFADGSVRVYDRRMAPP-DSLVCV------------YREHNDVEPI 1259 (1387)
T ss_pred -cccCCCccceeeccc---------ccCCceEEEeecCCceEEeecccCCc-ccccee------------ecccCCcccc
Confidence 101111122111110 12234456677899999999996432 212222 2356665 9
Q ss_pred EEEEECCCCcE-EEE-ecCCeEEEEeCCCCCCceeee---cC-------CC---cCCCCcccCCCCCceeecCcccccce
Q psy12356 228 SDVKISNSGRY-MIS-RDYLCVKVWDLHMESRPVETY---PT-------HT---KEENGQLRDPSNITALRVPQIKPIEL 292 (400)
Q Consensus 228 ~~v~fSpdg~~-las-~~D~tIklWD~~~~~~~l~~~---~~-------h~---~~~~g~~~~~~~~~~i~l~~~~~~~~ 292 (400)
..+.+-+.|-- |+| +.||.|++||+++.. ..++ .. |+ .++...+++.+..+.+++|+......
T Consensus 1260 v~~slq~~G~~elvSgs~~G~I~~~DlR~~~--~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~q~ikIy~~~G~~l 1337 (1387)
T KOG1517|consen 1260 VHLSLQRQGLGELVSGSQDGDIQLLDLRMSS--KETFLTIVAHWEYGSALTALTVHEHAPIIASGSAQLIKIYSLSGEQL 1337 (1387)
T ss_pred eeEEeecCCCcceeeeccCCeEEEEecccCc--ccccceeeeccccCccceeeeeccCCCeeeecCcceEEEEecChhhh
Confidence 99999886654 665 579999999999841 1111 11 11 12333343322226666665432211
Q ss_pred eeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 293 TVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 293 ~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
+.+..+ +..+ ++ -.+.+.+++|+|---.||.+ .|.+|.|+...
T Consensus 1338 ------------------~~~k~n--~~F~---~q------~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~ 1381 (1387)
T KOG1517|consen 1338 ------------------NIIKYN--PGFM---GQ------RIGSVSCLAFHPHRLLLAAGSADSTVSIYSCE 1381 (1387)
T ss_pred ------------------cccccC--cccc---cC------cCCCcceeeecchhHhhhhccCCceEEEeecC
Confidence 111111 0000 11 12346899999999999997 79999998654
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-11 Score=111.78 Aligned_cols=217 Identities=14% Similarity=0.150 Sum_probs=130.9
Q ss_pred eeEEEEEeccCCceEEEeeCCCeEEEEEccCCC--------cccccccEEEEEE-ecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 71 INKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN--------MEELNEVITAAEF-HPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~--------~~~~~~~V~sv~f-~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
|.++.|.+.|. ++++++.|++|+|||.++.. -+.|.+.|..|.| ||.=++.+|++|.|++++||.-...
T Consensus 16 ihdVs~D~~GR--RmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~ 93 (361)
T KOG2445|consen 16 IHDVSFDFYGR--RMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEK 93 (361)
T ss_pred eeeeeecccCc--eeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccc
Confidence 88999999875 89999999999999975433 2456788999998 4544689999999999999985422
Q ss_pred cccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 142 ALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
.. +..-+-|-.++. +.
T Consensus 94 ~~-------------------------------------------~~~~~~Wv~~tt---------------------l~ 109 (361)
T KOG2445|consen 94 SE-------------------------------------------EAHGRRWVRRTT---------------------LV 109 (361)
T ss_pred cc-------------------------------------------ccccceeEEEEE---------------------ee
Confidence 00 111122322211 11
Q ss_pred ccccCeEEEEECCC--CcEEEE-ecCCeEEEEeCCCCCCceeeec-CCCc--C--CCCcccCCCCCceeecCccccc--c
Q psy12356 222 EIISSISDVKISNS--GRYMIS-RDYLCVKVWDLHMESRPVETYP-THTK--E--ENGQLRDPSNITALRVPQIKPI--E 291 (400)
Q Consensus 222 ~h~~~V~~v~fSpd--g~~las-~~D~tIklWD~~~~~~~l~~~~-~h~~--~--~~g~~~~~~~~~~i~l~~~~~~--~ 291 (400)
.....|++|.|.|. |-.||+ +.||++||++.-.... |...+ .|+. . |-|+-. ....++ -|+.+.. .
T Consensus 110 DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~n-Ls~W~Lq~Ei~~~~~pp~~~~--~~~~Cv-sWn~sr~~~p 185 (361)
T KOG2445|consen 110 DSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMN-LSQWTLQHEIQNVIDPPGKNK--QPCFCV-SWNPSRMHEP 185 (361)
T ss_pred cCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccc-cccchhhhhhhhccCCccccc--CcceEE-eeccccccCc
Confidence 22367999999996 667776 5799999999876531 33221 1221 1 111100 001111 1331111 1
Q ss_pred eeeccCccceeccccccceEEEEEcCCC-cEEeecccchhhcccccceeEEEEccC-C---CEEEEe-cCCeEEEEeCcc
Q psy12356 292 LTVEASPRRIFANAHTYHINSISVNSDQ-LTVEASPRGIFADAHTYHISSTSVNSD-Q---ETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~i~~i~~s~dg-~~~~~~~~~~~~~gh~~~V~~i~fspD-g---~~las~-~D~~i~lW~~~~ 365 (400)
.+..|... ...|...+.-..++.+| ++++.+.. .+|+.+|..|+|.|. | ..||.+ .|| |+||++..
T Consensus 186 ~iAvgs~e---~a~~~~~~~Iye~~e~~rKw~kva~L----~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~ 257 (361)
T KOG2445|consen 186 LIAVGSDE---DAPHLNKVKIYEYNENGRKWLKVAEL----PDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKV 257 (361)
T ss_pred eEEEEccc---CCccccceEEEEecCCcceeeeehhc----CCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEee
Confidence 11111111 12344455555666666 33332221 489999999999996 3 467777 588 99999874
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.1e-12 Score=114.09 Aligned_cols=174 Identities=19% Similarity=0.249 Sum_probs=111.6
Q ss_pred eeeEEEEEECC-CCCeEEEecCC-------CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEE
Q psy12356 3 VYMREASQRFS-DGELLATGDKG-------GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 74 (400)
Q Consensus 3 ~~~v~~v~fsp-dG~~Las~s~D-------g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v 74 (400)
.|+|+.++-+| |...|||+-.+ ..+-||.+.+.-.... ....+.+..+. .+.-.+|++|
T Consensus 63 agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~--~~tlE~v~~Ld-----------teavg~i~cv 129 (370)
T KOG1007|consen 63 AGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSN--SSTLECVASLD-----------TEAVGKINCV 129 (370)
T ss_pred CcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccc--cchhhHhhcCC-----------HHHhCceeeE
Confidence 47899999999 77888888542 3478999886431100 00111111111 1112479999
Q ss_pred EEEeccCCceEEEeeCCCeEEEEEccCCCc--c--------cccccEEEEEEec-CCCCEEEEEeCCCeEEEEecccccc
Q psy12356 75 RWLRRKNQAHFLLSTNDQSFNIVDIKPTNM--E--------ELNEVITAAEFHP-IDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 75 ~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~--~--------~~~~~V~sv~f~p-~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
.|.|++ ..+.+=.|..|.+|+++.+.- . ++....++.+|+| .+++.+++ ..|++++.||+|+.+
T Consensus 130 ew~Pns---~klasm~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t-t~d~tl~~~D~RT~~- 204 (370)
T KOG1007|consen 130 EWEPNS---DKLASMDDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT-TSDSTLQFWDLRTMK- 204 (370)
T ss_pred EEcCCC---CeeEEeccCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE-eCCCcEEEEEccchh-
Confidence 999976 344444599999999987642 1 2334567778888 33455554 356788888887651
Q ss_pred cccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccc
Q psy12356 144 CDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEI 223 (400)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 223 (400)
+. |-++ ..|
T Consensus 205 ------~~-----------------------------------------~sI~------------------------dAH 213 (370)
T KOG1007|consen 205 ------KN-----------------------------------------NSIE------------------------DAH 213 (370)
T ss_pred ------hh-----------------------------------------cchh------------------------hhh
Confidence 00 0000 146
Q ss_pred ccCeEEEEECCCCcE-EEEe-cCCeEEEEeCCCCCCceeeecCC
Q psy12356 224 ISSISDVKISNSGRY-MISR-DYLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 224 ~~~V~~v~fSpdg~~-las~-~D~tIklWD~~~~~~~l~~~~~h 265 (400)
...|..+.|+|+-++ |+++ +|+-|||||.++...|++++.+|
T Consensus 214 gq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~H 257 (370)
T KOG1007|consen 214 GQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGH 257 (370)
T ss_pred cceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCC
Confidence 667999999999775 5564 67999999999887777776555
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.7e-12 Score=125.45 Aligned_cols=198 Identities=16% Similarity=0.130 Sum_probs=117.4
Q ss_pred eEEEEEECCCCCeEEEecCC---CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELLATGDKG---GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.|.+.+|||||++||.++.+ ..|++||+.++. .+.+..+.+|. ..++|+||+.
T Consensus 205 ~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~---------~~~l~~~~g~~---------------~~~~wSPDG~ 260 (429)
T PRK01742 205 PLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGA---------RKVVASFRGHN---------------GAPAFSPDGS 260 (429)
T ss_pred ccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCc---------eEEEecCCCcc---------------CceeECCCCC
Confidence 47889999999999988754 369999997542 22333444443 3578999874
Q ss_pred CceEEEe-eCCCeEEEE--EccCCCccc---ccccEEEEEEecCCCCEEEEEe-CCCeEEEEecccccccccccceeccC
Q psy12356 82 QAHFLLS-TNDQSFNIV--DIKPTNMEE---LNEVITAAEFHPIDCNLFVYSS-SKGTIRLCDMRAAALCDRHSKCLIEG 154 (400)
Q Consensus 82 ~~~~l~s-s~D~tI~lW--d~~~~~~~~---~~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~~~~~~~~~~~~~~~~~ 154 (400)
+++.+ +.|+.++|| |+.++.... +...+.+.+|+|++ +.|+.++ .++..+||++....... ...+.
T Consensus 261 --~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG-~~i~f~s~~~g~~~I~~~~~~~~~~----~~l~~ 333 (429)
T PRK01742 261 --RLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDG-QSILFTSDRSGSPQVYRMSASGGGA----SLVGG 333 (429)
T ss_pred --EEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCC-CEEEEEECCCCCceEEEEECCCCCe----EEecC
Confidence 56655 467776665 555555322 23457789999986 4555444 57899999876531100 00000
Q ss_pred cccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 155 TNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
.. .. ...+|++...+..+.++ +.+||+.++... .+. .+ ....++.|+|
T Consensus 334 ~~---~~----------~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~-----~lt------------~~-~~~~~~~~sP 381 (429)
T PRK01742 334 RG---YS----------AQISADGKTLVMINGDN-VVKQDLTSGSTE-----VLS------------ST-FLDESPSISP 381 (429)
T ss_pred CC---CC----------ccCCCCCCEEEEEcCCC-EEEEECCCCCeE-----Eec------------CC-CCCCCceECC
Confidence 00 11 12245554333223354 445898765421 010 00 1234678999
Q ss_pred CCcEEEE-ecCCeEEEEeCCC-CCCceeeecCC
Q psy12356 235 SGRYMIS-RDYLCVKVWDLHM-ESRPVETYPTH 265 (400)
Q Consensus 235 dg~~las-~~D~tIklWD~~~-~~~~l~~~~~h 265 (400)
||++|+. +.++.+++|++.. .+..++.+.+|
T Consensus 382 dG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~ 414 (429)
T PRK01742 382 NGIMIIYSSTQGLGKVLQLVSADGRFKARLPGS 414 (429)
T ss_pred CCCEEEEEEcCCCceEEEEEECCCCceEEccCC
Confidence 9999985 5678888887632 23456667555
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.2e-11 Score=112.33 Aligned_cols=144 Identities=17% Similarity=0.154 Sum_probs=95.1
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecC-CCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPI-DCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~-~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.++++...++|||+|..+++ ++.+...++.+.|... ++..+.+|+.||+||+||+|......+.. ..+..
T Consensus 42 ~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~-----~~~~~ 116 (376)
T KOG1188|consen 42 AVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARIS-----WTQQS 116 (376)
T ss_pred eEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhhee-----ccCCC
Confidence 57778889999999998876 4556677888888764 56789999999999999999984322110 00000
Q ss_pred --eeceeccCchhhhhhcccCcceeecC----CCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 159 --CQGLIVPESKREERQSSQNRREKEDN----RRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 159 --~~~~~~~~~~~~~~~~~~~~~~~~~~----~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
... .+. ........+.| ..+-.+.+||+|.... +++ ..+..|...|++|+|
T Consensus 117 ~~~f~-~ld--------~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq---~l~-----------~~~eSH~DDVT~lrF 173 (376)
T KOG1188|consen 117 GTPFI-CLD--------LNCKKNIIACGTELTRSDASVVLWDVRSEQQ---LLR-----------QLNESHNDDVTQLRF 173 (376)
T ss_pred CCcce-Eee--------ccCcCCeEEeccccccCceEEEEEEeccccc---hhh-----------hhhhhccCcceeEEe
Confidence 000 000 00011111111 2467899999997543 122 224468899999999
Q ss_pred CCC-CcEEEEe-cCCeEEEEeCCCC
Q psy12356 233 SNS-GRYMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 233 Spd-g~~las~-~D~tIklWD~~~~ 255 (400)
+|. -++|+|+ .||-|.|+|++..
T Consensus 174 HP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 174 HPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred cCCCCCeEEeecccceEEeeecCCC
Confidence 995 5577775 5999999999854
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.3e-11 Score=123.78 Aligned_cols=88 Identities=11% Similarity=0.186 Sum_probs=57.8
Q ss_pred CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeC---CCeEEEEEcc
Q psy12356 24 GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTN---DQSFNIVDIK 100 (400)
Q Consensus 24 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~---D~tI~lWd~~ 100 (400)
+..|+|||.+... .+.+..|. ..+...+|+||++ +++.++. +.+|++||+.
T Consensus 183 ~~~i~i~d~dg~~------------~~~lt~~~------------~~v~~p~wSPDG~--~la~~s~~~~~~~i~i~dl~ 236 (429)
T PRK01742 183 PYEVRVADYDGFN------------QFIVNRSS------------QPLMSPAWSPDGS--KLAYVSFENKKSQLVVHDLR 236 (429)
T ss_pred eEEEEEECCCCCC------------ceEeccCC------------CccccceEcCCCC--EEEEEEecCCCcEEEEEeCC
Confidence 5789999987431 12344443 2377899999985 6665543 3579999998
Q ss_pred CCCcc---cccccEEEEEEecCCCCEEEEEe-CCCeEEEEec
Q psy12356 101 PTNME---ELNEVITAAEFHPIDCNLFVYSS-SKGTIRLCDM 138 (400)
Q Consensus 101 ~~~~~---~~~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~ 138 (400)
+++.+ ...+...+++|+||+ +.|++++ .+|.++||.+
T Consensus 237 tg~~~~l~~~~g~~~~~~wSPDG-~~La~~~~~~g~~~Iy~~ 277 (429)
T PRK01742 237 SGARKVVASFRGHNGAPAFSPDG-SRLAFASSKDGVLNIYVM 277 (429)
T ss_pred CCceEEEecCCCccCceeECCCC-CEEEEEEecCCcEEEEEE
Confidence 87632 222334578999986 5666654 5887776654
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.6e-11 Score=120.34 Aligned_cols=246 Identities=15% Similarity=0.147 Sum_probs=153.0
Q ss_pred eEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|.|+.|+| +.++||.|..+|.|-+||+..+.... ...+ .+..| .|.+.|..+.|..+..+.
T Consensus 244 ~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~------~s~l-s~~~~----------sh~~~v~~vvW~~~~~~~ 306 (555)
T KOG1587|consen 244 EVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTP------PSGL-SALEV----------SHSEPVTAVVWLQNEHNT 306 (555)
T ss_pred ceeEEEeccCCcceEEeeccCceEEEEEccCCCCCC------Cccc-ccccc----------cCCcCeEEEEEeccCCCC
Confidence 488999999 88999999999999999998653210 0011 11222 234568899998765445
Q ss_pred eEEEeeCCCeEEEEEccCCCc---------ccc-------cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM---------EEL-------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRH 147 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~---------~~~-------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~ 147 (400)
.++++|.||.|..|+++.-.+ ..+ ...+++++|.|.+.+.|+.|+++|.|.-=.-... .
T Consensus 307 ~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~-~---- 381 (555)
T KOG1587|consen 307 EFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY-T---- 381 (555)
T ss_pred ceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC-c----
Confidence 688888899999998864221 111 1247899999998899999999998754221110 0
Q ss_pred cceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 148 SKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
... ...+.++ ..+..|.++|
T Consensus 382 -------------------------------------------------~~~-----~~~~~~~------~~~~~h~g~v 401 (555)
T KOG1587|consen 382 -------------------------------------------------PAP-----EVSYKGH------STFITHIGPV 401 (555)
T ss_pred -------------------------------------------------ccc-----ccccccc------ccccccCcce
Confidence 000 0000000 0122567899
Q ss_pred EEEEECCCCcEEE-EecCCeEEEEeCCCCCCceeeecCCC-------cCCCC--cccCCCCCceeecCcccccceeeccC
Q psy12356 228 SDVKISNSGRYMI-SRDYLCVKVWDLHMESRPVETYPTHT-------KEENG--QLRDPSNITALRVPQIKPIELTVEAS 297 (400)
Q Consensus 228 ~~v~fSpdg~~la-s~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g--~~~~~~~~~~i~l~~~~~~~~~~~~~ 297 (400)
.++.++|-+..+. +++|-+||||.-.....|+-.+.-+. ++|.- .+++...++.+.+||+-.+
T Consensus 402 ~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~------- 474 (555)
T KOG1587|consen 402 YAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD------- 474 (555)
T ss_pred EeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc-------
Confidence 9999999877554 66799999998874345665553321 22211 1223344555666654211
Q ss_pred ccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEec-CCeEEEEeCcc
Q psy12356 298 PRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSAD-DLRINLWHLEI 365 (400)
Q Consensus 298 ~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~-D~~i~lW~~~~ 365 (400)
+...+.++ .-+....+.+.|++.|+.|+.|+ .|+|.+|++..
T Consensus 475 --------~~~Pv~s~------------------~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 475 --------DEEPVLSQ------------------KVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred --------ccCCcccc------------------cccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 11111111 01244566788899999999995 88999999963
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.3e-10 Score=106.78 Aligned_cols=189 Identities=10% Similarity=0.073 Sum_probs=107.8
Q ss_pred EEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEe-eCCCeEEEE
Q psy12356 19 ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLS-TNDQSFNIV 97 (400)
Q Consensus 19 as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~s-s~D~tI~lW 97 (400)
++...|+.|++|++.+. +..+.++++... ..+..++++|+++ .+.++ ..++.|.+|
T Consensus 6 ~~~~~~~~I~~~~~~~~--------g~l~~~~~~~~~-------------~~~~~l~~spd~~--~lyv~~~~~~~i~~~ 62 (330)
T PRK11028 6 IASPESQQIHVWNLNHE--------GALTLLQVVDVP-------------GQVQPMVISPDKR--HLYVGVRPEFRVLSY 62 (330)
T ss_pred EEcCCCCCEEEEEECCC--------CceeeeeEEecC-------------CCCccEEECCCCC--EEEEEECCCCcEEEE
Confidence 33466899999999632 223334444321 1255689999873 44444 458899999
Q ss_pred Ecc-CCCcc-----cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc-cceeceeccCchhh
Q psy12356 98 DIK-PTNME-----ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN-CNCQGLIVPESKRE 170 (400)
Q Consensus 98 d~~-~~~~~-----~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 170 (400)
+++ ++.+. ........++|+|++..++++...++.|.+||+.+...... .+..... ....
T Consensus 63 ~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~---~~~~~~~~~~~~---------- 129 (330)
T PRK11028 63 RIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVA---PIQIIEGLEGCH---------- 129 (330)
T ss_pred EECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCC---ceeeccCCCccc----------
Confidence 996 34431 11234568999998644444444589999999974321110 0100000 0011
Q ss_pred hhhcccCc-ceeecCCCCCeEEEeecccccccCcc-cccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe--cCCe
Q psy12356 171 ERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRH-SKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR--DYLC 246 (400)
Q Consensus 171 ~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~--~D~t 246 (400)
.+...|++ .+.+....++.|.+||+.+....... ......+ .+ .....++|+|||+++..+ .+++
T Consensus 130 ~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~---------~g--~~p~~~~~~pdg~~lyv~~~~~~~ 198 (330)
T PRK11028 130 SANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV---------EG--AGPRHMVFHPNQQYAYCVNELNSS 198 (330)
T ss_pred EeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC---------CC--CCCceEEECCCCCEEEEEecCCCE
Confidence 11123444 34455557899999999763221100 0000000 01 235679999999998754 3799
Q ss_pred EEEEeCCC
Q psy12356 247 VKVWDLHM 254 (400)
Q Consensus 247 IklWD~~~ 254 (400)
|.+||+..
T Consensus 199 v~v~~~~~ 206 (330)
T PRK11028 199 VDVWQLKD 206 (330)
T ss_pred EEEEEEeC
Confidence 99999984
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.4e-11 Score=108.07 Aligned_cols=218 Identities=15% Similarity=0.117 Sum_probs=149.9
Q ss_pred ceeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 2 LVYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 2 ~~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
+..-|+|-+|++|+..+|.+-....|.||...+.+ .++..++++.|. ..|+.|.|+|.++
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~--------~w~~~htls~Hd------------~~vtgvdWap~sn 68 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGAD--------LWEPAHTLSEHD------------KIVTGVDWAPKSN 68 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCC--------CceeceehhhhC------------cceeEEeecCCCC
Confidence 34568999999999999999999999999988643 255667888886 4599999999876
Q ss_pred CceEEEeeCCCeEEEEEc-cCCC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc--cccc-ccee
Q psy12356 82 QAHFLLSTNDQSFNIVDI-KPTN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL--CDRH-SKCL 151 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~-~~~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~--~~~~-~~~~ 151 (400)
++++++.|....+|.. +.+. +..++...++|.|+|. .+.||.||.-+.|.+|-.....- +-+| .+.+
T Consensus 69 --rIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~-enkFAVgSgar~isVcy~E~ENdWWVsKhikkPi 145 (361)
T KOG1523|consen 69 --RIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPK-ENKFAVGSGARLISVCYYEQENDWWVSKHIKKPI 145 (361)
T ss_pred --ceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCc-CceEEeccCccEEEEEEEecccceehhhhhCCcc
Confidence 8999999999999998 4444 2345678899999998 48999999999999999877631 0111 0111
Q ss_pred ccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCC--CCcccccccccCeEE
Q psy12356 152 IEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDP--TNKSFFSEIISSISD 229 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~ 229 (400)
+.-..+. .-.++...++.|+.|+.+|++..--......+.....+...| .+...+....++|..
T Consensus 146 rStv~sl--------------dWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~ 211 (361)
T KOG1523|consen 146 RSTVTSL--------------DWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHG 211 (361)
T ss_pred ccceeee--------------eccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceee
Confidence 1100111 123566667788899999998643211111111111111111 011111123468999
Q ss_pred EEECCCCcEEE-EecCCeEEEEeCCCCC
Q psy12356 230 VKISNSGRYMI-SRDYLCVKVWDLHMES 256 (400)
Q Consensus 230 v~fSpdg~~la-s~~D~tIklWD~~~~~ 256 (400)
+.|||+|..|+ -+.|.++.+=|...+.
T Consensus 212 v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 212 VLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred eEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 99999999999 5789999999988764
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.5e-11 Score=106.09 Aligned_cols=69 Identities=16% Similarity=0.328 Sum_probs=51.0
Q ss_pred eeeEEEEEeccCCceEEEe--eCCCeEEEEEccCCCccc-ccccEEEEEEecCCCCEEEEEeC---CCeEEEEecccc
Q psy12356 70 KINKIRWLRRKNQAHFLLS--TNDQSFNIVDIKPTNMEE-LNEVITAAEFHPIDCNLFVYSSS---KGTIRLCDMRAA 141 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~s--s~D~tI~lWd~~~~~~~~-~~~~V~sv~f~p~~~~~las~s~---Dg~i~lWD~~~~ 141 (400)
.|.+++|+|+++ ++++. ..++.|.|||++...... ....++.+.|+|+| +++|.++. .|.|.+||+++.
T Consensus 61 ~I~~~~WsP~g~--~favi~g~~~~~v~lyd~~~~~i~~~~~~~~n~i~wsP~G-~~l~~~g~~n~~G~l~~wd~~~~ 135 (194)
T PF08662_consen 61 PIHDVAWSPNGN--EFAVIYGSMPAKVTLYDVKGKKIFSFGTQPRNTISWSPDG-RFLVLAGFGNLNGDLEFWDVRKK 135 (194)
T ss_pred ceEEEEECcCCC--EEEEEEccCCcccEEEcCcccEeEeecCCCceEEEECCCC-CEEEEEEccCCCcEEEEEECCCC
Confidence 499999999875 66553 357899999997433322 24567899999986 67888764 366888988765
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-09 Score=101.87 Aligned_cols=234 Identities=14% Similarity=0.169 Sum_probs=142.2
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.++...|..|+..|..|+.|| -++|+.+... ++ .|..... ..|--.=|+. ..
T Consensus 7 ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~----------k~-----~~~~~~~--------~~IvEmLFSS----SL 58 (391)
T KOG2110|consen 7 TINFIGFNQDSTLLSVGSKDG-YKIFSCSPFE----------KC-----FSKDTEG--------VSIVEMLFSS----SL 58 (391)
T ss_pred ceeeeeeccceeEEEccCCCc-eeEEecCchH----------Hh-----hcccCCC--------eEEEEeeccc----ce
Confidence 466777999999999999998 5678776421 11 1111000 0122222432 14
Q ss_pred EEEeeCC--CeEEEEEccCCC--cc-cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 85 FLLSTND--QSFNIVDIKPTN--ME-ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l~ss~D--~tI~lWd~~~~~--~~-~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
++..+.+ ..+++.+++++. |+ .....|-+|.++- ++++.+-.+. |.|+|++.-+++++... -. .+.
T Consensus 59 vaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~VrmNr---~RLvV~Lee~-IyIydI~~MklLhTI~t----~~-~n~ 129 (391)
T KOG2110|consen 59 VAIVSIKQPRKLKVVHFKKKTTICEIFFPTSILAVRMNR---KRLVVCLEES-IYIYDIKDMKLLHTIET----TP-PNP 129 (391)
T ss_pred eEEEecCCCceEEEEEcccCceEEEEecCCceEEEEEcc---ceEEEEEccc-EEEEecccceeehhhhc----cC-CCc
Confidence 4444433 358889987765 22 2245788999976 3566665544 99999998865443110 00 011
Q ss_pred ece-eccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 160 QGL-IVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 160 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
.++ .++.... ..-.+.-+....|.|.|||+.+-.. ...+..|.+.+.+++|||+|.+
T Consensus 130 ~gl~AlS~n~~------n~ylAyp~s~t~GdV~l~d~~nl~~----------------v~~I~aH~~~lAalafs~~G~l 187 (391)
T KOG2110|consen 130 KGLCALSPNNA------NCYLAYPGSTTSGDVVLFDTINLQP----------------VNTINAHKGPLAALAFSPDGTL 187 (391)
T ss_pred cceEeeccCCC------CceEEecCCCCCceEEEEEccccee----------------eeEEEecCCceeEEEECCCCCE
Confidence 111 1110000 0012333444678999999875321 1225578999999999999999
Q ss_pred EEEecC-Ce-EEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEc
Q psy12356 239 MISRDY-LC-VKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVN 316 (400)
Q Consensus 239 las~~D-~t-IklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s 316 (400)
||+++| || |||+.+.++. .+.+|+- |- .
T Consensus 188 lATASeKGTVIRVf~v~~G~-kl~eFRR----------------------------------------G~----~----- 217 (391)
T KOG2110|consen 188 LATASEKGTVIRVFSVPEGQ-KLYEFRR----------------------------------------GT----Y----- 217 (391)
T ss_pred EEEeccCceEEEEEEcCCcc-EeeeeeC----------------------------------------Cc----e-----
Confidence 998754 54 8999998764 4555521 00 0
Q ss_pred CCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 317 SDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 317 ~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
.-.|++|+||||+++|+++ ..+||.|+.++.
T Consensus 218 ------------------~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 218 ------------------PVSIYSLSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred ------------------eeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence 0136789999999999886 678999999875
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=1e-10 Score=107.19 Aligned_cols=193 Identities=13% Similarity=0.208 Sum_probs=122.7
Q ss_pred CCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCC
Q psy12356 13 SDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQ 92 (400)
Q Consensus 13 pdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~ 92 (400)
|+-.+.|+.+.|.-|++||..+++ ....+++...--++. .-.+++|+||+ ..+.++...
T Consensus 121 P~t~l~a~ssr~~PIh~wdaftG~-----------lraSy~~ydh~de~t-------aAhsL~Fs~DG---eqlfaGykr 179 (406)
T KOG2919|consen 121 PSTNLFAVSSRDQPIHLWDAFTGK-----------LRASYRAYDHQDEYT-------AAHSLQFSPDG---EQLFAGYKR 179 (406)
T ss_pred CccceeeeccccCceeeeeccccc-----------cccchhhhhhHHhhh-------hheeEEecCCC---CeEeecccc
Confidence 888999999999999999988753 122344332110010 12479999988 577778899
Q ss_pred eEEEEEc-cCCC-cc----------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc---cccceeccCccc
Q psy12356 93 SFNIVDI-KPTN-ME----------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD---RHSKCLIEGTNC 157 (400)
Q Consensus 93 tI~lWd~-~~~~-~~----------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~---~~~~~~~~~~~~ 157 (400)
+||++|+ ++|. +. +..+.|.+++|||.+..++|.++.-..+-|+.-..+..+. +|..
T Consensus 180 cirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~g-------- 251 (406)
T KOG2919|consen 180 CIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGG-------- 251 (406)
T ss_pred eEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCC--------
Confidence 9999999 6665 21 1245689999999887788999888877776655443221 1111
Q ss_pred ceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc-CeEEEEE--C
Q psy12356 158 NCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS-SISDVKI--S 233 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~v~f--S 233 (400)
.+..+.+ .+++ .....+..|-.|-.||+|..... .-.+ ..|.. .-..|-| .
T Consensus 252 GvThL~~----------~edGn~lfsGaRk~dkIl~WDiR~~~~p---v~~L------------~rhv~~TNQRI~FDld 306 (406)
T KOG2919|consen 252 GVTHLQW----------CEDGNKLFSGARKDDKILCWDIRYSRDP---VYAL------------ERHVGDTNQRILFDLD 306 (406)
T ss_pred CeeeEEe----------ccCcCeecccccCCCeEEEEeehhccch---hhhh------------hhhccCccceEEEecC
Confidence 1112221 1222 22233456789999999976432 1111 12322 2223444 6
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCCCCce
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHMESRPV 259 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~~~~l 259 (400)
|+|++||++ .||.|++||++..+.+.
T Consensus 307 ~~~~~LasG~tdG~V~vwdlk~~gn~~ 333 (406)
T KOG2919|consen 307 PKGEILASGDTDGSVRVWDLKDLGNEV 333 (406)
T ss_pred CCCceeeccCCCccEEEEecCCCCCcc
Confidence 899999987 69999999999854433
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.3e-10 Score=103.64 Aligned_cols=210 Identities=15% Similarity=0.169 Sum_probs=132.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+++||+||+.|+|+|.|.+|.+||+..+. +++.++=. ..|..+.|+|.. .++
T Consensus 67 pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs-----------~l~rirf~-------------spv~~~q~hp~k-~n~ 121 (405)
T KOG1273|consen 67 PITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS-----------PLKRIRFD-------------SPVWGAQWHPRK-RNK 121 (405)
T ss_pred ceeEEEecCCCCEeeeecCCceeEEEeccCCC-----------ceeEEEcc-------------Cccceeeecccc-CCe
Confidence 58899999999999999999999999998653 23334322 348889999965 345
Q ss_pred EEEeeCCCeEEEEEccCCC---cc-----cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc-
Q psy12356 85 FLLSTNDQSFNIVDIKPTN---ME-----ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT- 155 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~---~~-----~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~- 155 (400)
.+++-.+..-.+-++.... +. .....-....|++. ++++.+|...|.+-+.|..+-+. +..+.
T Consensus 122 ~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~-g~yIitGtsKGkllv~~a~t~e~-------vas~ri 193 (405)
T KOG1273|consen 122 CVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRR-GKYIITGTSKGKLLVYDAETLEC-------VASFRI 193 (405)
T ss_pred EEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCC-CCEEEEecCcceEEEEecchhee-------eeeeee
Confidence 5555555556666665433 11 01111233468887 47999999999999999988743 22221
Q ss_pred --ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccc--cCeEEEE
Q psy12356 156 --NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEII--SSISDVK 231 (400)
Q Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~ 231 (400)
...+..+.++ ..+......+.|..||.|+++.-..+.+. .. ++ ..+.+..-. ..-.+|+
T Consensus 194 ts~~~IK~I~~s----------~~g~~liiNtsDRvIR~ye~~di~~~~r~-~e---~e---~~~K~qDvVNk~~Wk~cc 256 (405)
T KOG1273|consen 194 TSVQAIKQIIVS----------RKGRFLIINTSDRVIRTYEISDIDDEGRD-GE---VE---PEHKLQDVVNKLQWKKCC 256 (405)
T ss_pred chheeeeEEEEe----------ccCcEEEEecCCceEEEEehhhhcccCcc-CC---cC---hhHHHHHHHhhhhhhhee
Confidence 1223334443 34445555668999999998732111000 00 00 001111111 1345799
Q ss_pred ECCCCcEEEEe--cCCeEEEEeCCCCCCceeeecCC
Q psy12356 232 ISNSGRYMISR--DYLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 232 fSpdg~~las~--~D~tIklWD~~~~~~~l~~~~~h 265 (400)
||.||.|+.++ .-..+.||.-..|. .++.+.|-
T Consensus 257 fs~dgeYv~a~s~~aHaLYIWE~~~Gs-LVKILhG~ 291 (405)
T KOG1273|consen 257 FSGDGEYVCAGSARAHALYIWEKSIGS-LVKILHGT 291 (405)
T ss_pred ecCCccEEEeccccceeEEEEecCCcc-eeeeecCC
Confidence 99999999754 35789999999874 67777553
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.5e-11 Score=105.81 Aligned_cols=242 Identities=13% Similarity=0.116 Sum_probs=137.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|+++-|-.+++ |.+|..-|.|++|++++.+ ..-.|++|.. ..|+.+.-.|..
T Consensus 15 ~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r-----------~~~~~r~~g~-----------~~it~lq~~p~d--- 68 (323)
T KOG0322|consen 15 SSVTSVLFQANER-LMSGLSVGIVKMWVLQTER-----------DLPLIRLFGR-----------LFITNLQSIPND--- 68 (323)
T ss_pred chheehhhccchh-hhcccccceEEEEEeecCc-----------cchhhhhhcc-----------ceeeceeecCCc---
Confidence 4678899988886 8889999999999998643 1223443321 224444444432
Q ss_pred eEEEeeCCCeEEEEEccCCC--------------cc-----------------------cc-------------------
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN--------------ME-----------------------EL------------------- 107 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~--------------~~-----------------------~~------------------- 107 (400)
.+.+=+.|..+-+|++.-+. ++ .|
T Consensus 69 ~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~ 148 (323)
T KOG0322|consen 69 SLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERS 148 (323)
T ss_pred chhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhcc
Confidence 45555667777777765411 00 00
Q ss_pred -cccEEEEEEe-cCCCC-EEEEEeCCCeEEEEecccccccccc---cceeccCcc--cceeceeccCchhhhhhcccCcc
Q psy12356 108 -NEVITAAEFH-PIDCN-LFVYSSSKGTIRLCDMRAAALCDRH---SKCLIEGTN--CNCQGLIVPESKREERQSSQNRR 179 (400)
Q Consensus 108 -~~~V~sv~f~-p~~~~-~las~s~Dg~i~lWD~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 179 (400)
.+.+++..+. ..+.. +++.|-++|.+-+||+.++...-.+ ++.+..... ....++.+.. .-++
T Consensus 149 Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas--------~~~r- 219 (323)
T KOG0322|consen 149 KLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYAS--------SCDR- 219 (323)
T ss_pred ccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeech--------hhcC-
Confidence 0124443321 11222 4566667999999999987211000 000000000 0111111110 0111
Q ss_pred eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCc
Q psy12356 180 EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRP 258 (400)
Q Consensus 180 ~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~ 258 (400)
-.+|+.+-.+-.|.+......- +++.+ +.--...|..+..-||++++|+ +.|+.|||+..++.+ |
T Consensus 220 -Gisgga~dkl~~~Sl~~s~gsl-q~~~e-----------~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~-p 285 (323)
T KOG0322|consen 220 -GISGGADDKLVMYSLNHSTGSL-QIRKE-----------ITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLN-P 285 (323)
T ss_pred -CcCCCccccceeeeeccccCcc-cccce-----------EEecCCCccceEEccCCcEEeecccCCcEEEEEeccCC-c
Confidence 1234455667777765432110 00100 0011146888999999999997 579999999998753 5
Q ss_pred eeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccce
Q psy12356 259 VETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHI 338 (400)
Q Consensus 259 l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V 338 (400)
|..+. -|...|
T Consensus 286 LAVLk---------------------------------------------------------------------yHsagv 296 (323)
T KOG0322|consen 286 LAVLK---------------------------------------------------------------------YHSAGV 296 (323)
T ss_pred hhhhh---------------------------------------------------------------------hhhcce
Confidence 54321 266678
Q ss_pred eEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 339 SSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 339 ~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
++++||||...+|++ .|++|.+|++
T Consensus 297 n~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 297 NAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred eEEEeCCCCchhhhccCCceEEeeec
Confidence 999999999999997 6999999986
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.5e-10 Score=102.92 Aligned_cols=154 Identities=14% Similarity=0.213 Sum_probs=105.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+|+++-+ +|+.+-.+. |.|||+.+ +++++++.-..+. ..++ ++++|....+.
T Consensus 89 ~IL~VrmNr~--RLvV~Lee~-IyIydI~~-----------MklLhTI~t~~~n---------~~gl--~AlS~n~~n~y 143 (391)
T KOG2110|consen 89 SILAVRMNRK--RLVVCLEES-IYIYDIKD-----------MKLLHTIETTPPN---------PKGL--CALSPNNANCY 143 (391)
T ss_pred ceEEEEEccc--eEEEEEccc-EEEEeccc-----------ceeehhhhccCCC---------ccce--EeeccCCCCce
Confidence 3566776644 677776554 99999974 5566666433111 0123 44555443345
Q ss_pred EEE-ee-CCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeE-EEEecccccccccccceeccCccc
Q psy12356 85 FLL-ST-NDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTI-RLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 85 ~l~-ss-~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i-~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
++. ++ .-|.|.|||+.+-+ +.-|.+.+.+++|+|+| .++||+|+.||| |++.+.+|..
T Consensus 144 lAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G-~llATASeKGTVIRVf~v~~G~k-------------- 208 (391)
T KOG2110|consen 144 LAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDG-TLLATASEKGTVIRVFSVPEGQK-------------- 208 (391)
T ss_pred EEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCC-CEEEEeccCceEEEEEEcCCccE--------------
Confidence 554 33 47899999986543 35678899999999985 899999999975 9999877721
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
++..|-|.. ...|.+++||||+.
T Consensus 209 ----------------------------------l~eFRRG~~-----------------------~~~IySL~Fs~ds~ 231 (391)
T KOG2110|consen 209 ----------------------------------LYEFRRGTY-----------------------PVSIYSLSFSPDSQ 231 (391)
T ss_pred ----------------------------------eeeeeCCce-----------------------eeEEEEEEECCCCC
Confidence 222222211 13589999999999
Q ss_pred EEEEe-cCCeEEEEeCCCC
Q psy12356 238 YMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 238 ~las~-~D~tIklWD~~~~ 255 (400)
+|+++ +-+||.|+.+...
T Consensus 232 ~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 232 FLAASSNTETVHIFKLEKV 250 (391)
T ss_pred eEEEecCCCeEEEEEeccc
Confidence 99865 5699999998853
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-10 Score=113.08 Aligned_cols=218 Identities=15% Similarity=0.132 Sum_probs=128.5
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcc---eeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEY---NVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~---~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
+-|.||..++.|+.+-||+.||+|+.|++..... .+..+ ....+|.||+ +.|..+++|+..
T Consensus 345 gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~d----p~ds~dp~vl~~~l~Ght------------davw~l~~s~~~ 408 (577)
T KOG0642|consen 345 GPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQD----PDDSYDPSVLSGTLLGHT------------DAVWLLALSSTK 408 (577)
T ss_pred CceEEEEecCCceEEEeeccCceeeeeccCCCCC----cccccCcchhccceeccc------------cceeeeeecccc
Confidence 5689999999999999999999999998763211 11122 2344677887 448889998765
Q ss_pred CCceEEEeeCCCeEEEEEccCCCc---ccc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 81 NQAHFLLSTNDQSFNIVDIKPTNM---EEL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 81 ~~~~~l~ss~D~tI~lWd~~~~~~---~~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
+ ++++++.|||+|+|+...... ... .+.-.++.|-.......++...-+.-.+.|+........+.....+..
T Consensus 409 ~--~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~ 486 (577)
T KOG0642|consen 409 D--RLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGP 486 (577)
T ss_pred c--ceeeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcc
Confidence 3 788889999999999866542 111 111233444321111111111122222333333211110000000000
Q ss_pred -ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 156 -NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 156 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
..+..+. +.+.+......++-.|..||++|..++..... ...|...++++++-|
T Consensus 487 ~~~~~in~---------vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s----------------~~a~~~svtslai~~ 541 (577)
T KOG0642|consen 487 RRYPQINK---------VVSHPTADITFTAHEDRSIRFFDNKTGKILHS----------------MVAHKDSVTSLAIDP 541 (577)
T ss_pred cccCccce---------EEecCCCCeeEecccCCceecccccccccchh----------------eeeccceecceeecC
Confidence 0000011 12234445556667899999999988764311 235678899999999
Q ss_pred CCcEEEEe-cCCeEEEEeCCCCCCceeeecCC
Q psy12356 235 SGRYMISR-DYLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 235 dg~~las~-~D~tIklWD~~~~~~~l~~~~~h 265 (400)
+|-+|+++ .|+.|++|.+... .|...+.+|
T Consensus 542 ng~~l~s~s~d~sv~l~kld~k-~~~~es~~~ 572 (577)
T KOG0642|consen 542 NGPYLMSGSHDGSVRLWKLDVK-TCVLESTAH 572 (577)
T ss_pred CCceEEeecCCceeehhhccch-heeeccccc
Confidence 99999975 6999999998754 355555444
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.8e-10 Score=111.67 Aligned_cols=110 Identities=17% Similarity=0.286 Sum_probs=80.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|.|-+|+|||.-|+|++.||-|++|...+- +.+++.-.. ..|.|++|-|+++
T Consensus 105 ~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM------------LRStl~Q~~------------~~v~c~~W~p~S~-- 158 (737)
T KOG1524|consen 105 AAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM------------LRSTVVQNE------------ESIRCARWAPNSN-- 158 (737)
T ss_pred hhhhhcccCCCCceeeeecCCceEEEEeccch------------HHHHHhhcC------------ceeEEEEECCCCC--
Confidence 56788899999999999999999999998631 122332222 3499999999875
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.++.+.. +.+.|=-+..+. -+.|.+.|-++.|+|.. ++++||++|-..|+||....
T Consensus 159 ~vl~c~g-~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s-~lI~sgGED~kfKvWD~~G~ 218 (737)
T KOG1524|consen 159 SIVFCQG-GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQS-NIIASGGEDFRFKIWDAQGA 218 (737)
T ss_pred ceEEecC-CeEEEeecccccceeEEeccCcEEEEeecCccc-cceeecCCceeEEeecccCc
Confidence 5555422 333333333222 24577889999999985 89999999999999997665
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.9e-10 Score=110.05 Aligned_cols=248 Identities=12% Similarity=0.137 Sum_probs=146.5
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD 145 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~ 145 (400)
+.|.+|...|.+. -+++++.||++|||.+.+|.+. ...+.|.+|+|+|....-++.+...+.+-|-+..-|..+.
T Consensus 401 g~Vr~iSvdp~G~--wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e 478 (733)
T KOG0650|consen 401 GLVRSISVDPSGE--WLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLE 478 (733)
T ss_pred CeEEEEEecCCcc--eeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccccchhh
Confidence 5588998888663 5666789999999999999853 3457899999999875555555555555555543331100
Q ss_pred cccceeccCcccceeceeccCchhhhhhc-ccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccc
Q psy12356 146 RHSKCLIEGTNCNCQGLIVPESKREERQS-SQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEII 224 (400)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 224 (400)
. . ..+...+ .+ -....++.+-.|.-.........+. ....|.
T Consensus 479 ~------~--------------~t~ell~~~~-----~~~~p~~~~~~W~~~~~~e~~~~v~------------~~I~~~ 521 (733)
T KOG0650|consen 479 V------G--------------PTKELLASAP-----NESEPDAAVVTWSRASLDELEKGVC------------IVIKHP 521 (733)
T ss_pred h------c--------------chhhhhhcCC-----CccCCcccceeechhhhhhhccceE------------EEEecC
Confidence 0 0 0000000 00 0012345566665332111110000 122566
Q ss_pred cCeEEEEECCCCcEEEEe----cCCeEEEEeCCCCC--CceeeecCC----CcCCCCccc-CCCCCceeecCccccccee
Q psy12356 225 SSISDVKISNSGRYMISR----DYLCVKVWDLHMES--RPVETYPTH----TKEENGQLR-DPSNITALRVPQIKPIELT 293 (400)
Q Consensus 225 ~~V~~v~fSpdg~~las~----~D~tIklWD~~~~~--~~l~~~~~h----~~~~~g~~~-~~~~~~~i~l~~~~~~~~~ 293 (400)
.+|.+|.|+-+|.|||+. +.+.|-|.++.... .|.+.-.|+ .|+|.-.++ .++. ..|++.++..-++
T Consensus 522 k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqel- 599 (733)
T KOG0650|consen 522 KSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQEL- 599 (733)
T ss_pred CccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHH-
Confidence 899999999999999963 24789999998753 233332333 144443332 2222 3455555532111
Q ss_pred eccCccceeccccccceEEEEEcCCC-cEEeecccc------------hhh--cccccceeEEEEccCCCEEEEe-cCCe
Q psy12356 294 VEASPRRIFANAHTYHINSISVNSDQ-LTVEASPRG------------IFA--DAHTYHISSTSVNSDQETYLSA-DDLR 357 (400)
Q Consensus 294 ~~~~~~~~~~~~~~~~i~~i~~s~dg-~~~~~~~~~------------~~~--~gh~~~V~~i~fspDg~~las~-~D~~ 357 (400)
+ +++ .....+|.+++++|.| +++.++..+ .|+ .-|...|.+|+|++-=.++||+ +|++
T Consensus 600 v----KkL--~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgt 673 (733)
T KOG0650|consen 600 V----KKL--LTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGT 673 (733)
T ss_pred H----HHH--hcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCc
Confidence 0 111 1235678999999977 455543321 222 3699999999999999999997 7899
Q ss_pred EEEEeC
Q psy12356 358 INLWHL 363 (400)
Q Consensus 358 i~lW~~ 363 (400)
+.|+--
T Consensus 674 v~Vfhg 679 (733)
T KOG0650|consen 674 VIVFHG 679 (733)
T ss_pred EEEEee
Confidence 888864
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.1e-09 Score=108.86 Aligned_cols=210 Identities=17% Similarity=0.187 Sum_probs=118.8
Q ss_pred EEEEEEC-CCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRF-SDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fs-pdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
|..++-+ +++.+++|||.||+|||||..+-... .+.++..-++.- + ..++.++...+.++ +
T Consensus 1051 v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~----~~s~rS~ltys~-~-----------~sr~~~vt~~~~~~--~ 1112 (1431)
T KOG1240|consen 1051 VIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGE----GGSARSELTYSP-E-----------GSRVEKVTMCGNGD--Q 1112 (1431)
T ss_pred ccceeecCCCCceEEEecCCceEEEeeehhhhcC----cceeeeeEEEec-c-----------CCceEEEEeccCCC--e
Confidence 3345554 56799999999999999998753210 012221112211 1 13466666666554 8
Q ss_pred EEEeeCCCeEEEEEccCCCc----------cc---ccccEEEEEEecCCCC-EEEEEeCCCeEEEEecccccccccccce
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM----------EE---LNEVITAAEFHPIDCN-LFVYSSSKGTIRLCDMRAAALCDRHSKC 150 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~----------~~---~~~~V~sv~f~p~~~~-~las~s~Dg~i~lWD~~~~~~~~~~~~~ 150 (400)
+++++.||.|++.+++-... .+ ....|.--+|....+. .++++..-+.|..||+++..-.-+...
T Consensus 1113 ~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~- 1191 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN- 1191 (1431)
T ss_pred EEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc-
Confidence 88899999999999875210 01 1123333445444445 788888889999999998732100000
Q ss_pred eccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEE
Q psy12356 151 LIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDV 230 (400)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 230 (400)
.+....+..+.++ +-....+.|+..|.+-+||+|=+. ++..|+-| +..++..|
T Consensus 1192 --~~~hG~vTSi~id----------p~~~WlviGts~G~l~lWDLRF~~----~i~sw~~P-----------~~~~i~~v 1244 (1431)
T KOG1240|consen 1192 --QLRHGLVTSIVID----------PWCNWLVIGTSRGQLVLWDLRFRV----PILSWEHP-----------ARAPIRHV 1244 (1431)
T ss_pred --CccccceeEEEec----------CCceEEEEecCCceEEEEEeecCc----eeecccCc-----------ccCCcceE
Confidence 0000011111111 233345566789999999998432 22333322 22455555
Q ss_pred EECC---CCcEEEEe---cCCeEEEEeCCCCCCceeee
Q psy12356 231 KISN---SGRYMISR---DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 231 ~fSp---dg~~las~---~D~tIklWD~~~~~~~l~~~ 262 (400)
...| .....+++ ..+.|-+|++.++. +-..+
T Consensus 1245 ~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~-~~~vl 1281 (1431)
T KOG1240|consen 1245 WLCPTYPQESVSVSAGSSSNNEVSTWNMETGL-RQTVL 1281 (1431)
T ss_pred EeeccCCCCceEEEecccCCCceeeeecccCc-ceEEE
Confidence 5444 44555532 46889999999874 33444
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.4e-10 Score=100.32 Aligned_cols=109 Identities=11% Similarity=0.193 Sum_probs=79.0
Q ss_pred eeEEEEEECCCCCeEEEe--cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSDGELLATG--DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~--s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
+.|.+++|+|+|+.+|.+ ..++.|.|||+.. +.+..+.. ..++.|.|+|+|+
T Consensus 60 ~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~------------~~i~~~~~--------------~~~n~i~wsP~G~ 113 (194)
T PF08662_consen 60 GPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKG------------KKIFSFGT--------------QPRNTISWSPDGR 113 (194)
T ss_pred CceEEEEECcCCCEEEEEEccCCcccEEEcCcc------------cEeEeecC--------------CCceEEEECCCCC
Confidence 459999999999997654 4678999999962 12334432 2378899999985
Q ss_pred CceEEEeeC---CCeEEEEEccCCCc-cc-ccccEEEEEEecCCCCEEEEEeC------CCeEEEEecccc
Q psy12356 82 QAHFLLSTN---DQSFNIVDIKPTNM-EE-LNEVITAAEFHPIDCNLFVYSSS------KGTIRLCDMRAA 141 (400)
Q Consensus 82 ~~~~l~ss~---D~tI~lWd~~~~~~-~~-~~~~V~sv~f~p~~~~~las~s~------Dg~i~lWD~~~~ 141 (400)
.+++++. .|.|.+||+++.+. .. ....++.++|+|+| ++|+++.. |+.++||+....
T Consensus 114 --~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~~t~~~WsPdG-r~~~ta~t~~r~~~dng~~Iw~~~G~ 181 (194)
T PF08662_consen 114 --FLVLAGFGNLNGDLEFWDVRKKKKISTFEHSDATDVEWSPDG-RYLATATTSPRLRVDNGFKIWSFQGR 181 (194)
T ss_pred --EEEEEEccCCCcEEEEEECCCCEEeeccccCcEEEEEEcCCC-CEEEEEEeccceeccccEEEEEecCe
Confidence 5666543 46899999986652 21 12347899999986 67777754 789999998654
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.8e-09 Score=104.42 Aligned_cols=70 Identities=16% Similarity=0.250 Sum_probs=47.6
Q ss_pred eeeEEEEEeccCCceEEEee---CCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCe--EEEEecccc
Q psy12356 70 KINKIRWLRRKNQAHFLLST---NDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGT--IRLCDMRAA 141 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss---~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~--i~lWD~~~~ 141 (400)
.+...+|+||++ +++..+ .+..|.+||+.+++.+ .+.+.+.+.+|+|+|..++++.+.++. |.+||+.++
T Consensus 203 ~v~~p~wSpDG~--~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~ 280 (435)
T PRK05137 203 LVLTPRFSPNRQ--EITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSG 280 (435)
T ss_pred CeEeeEECCCCC--EEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCC
Confidence 478899999985 566543 3578999999888642 234456788999987544455555655 445565544
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-10 Score=110.13 Aligned_cols=196 Identities=17% Similarity=0.237 Sum_probs=134.7
Q ss_pred EEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE
Q psy12356 7 EASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL 86 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l 86 (400)
+.+.|+.+|+.|+-|+.-|.|-.+|..+.. +...+.. .++|.++.|.-.. +++
T Consensus 133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~-----------L~~Ei~v-------------~Etv~Dv~~LHne---q~~ 185 (545)
T KOG1272|consen 133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKK-----------LHFEINV-------------METVRDVTFLHNE---QFF 185 (545)
T ss_pred eeeeecCCccEEEecCCccceeeeecccce-----------eeeeeeh-------------hhhhhhhhhhcch---HHH
Confidence 567899999999999999999999987532 1112221 2457888887654 566
Q ss_pred EeeCCCeEEEEEccCCCcccc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceec
Q psy12356 87 LSTNDQSFNIVDIKPTNMEEL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIV 164 (400)
Q Consensus 87 ~ss~D~tI~lWd~~~~~~~~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (400)
+....+-+.|+|-...++..+ ...|..+.|=|.+ .+|++++..|.++--|+.+|+++..+ ++..+.
T Consensus 186 AVAQK~y~yvYD~~GtElHClk~~~~v~rLeFLPyH-fLL~~~~~~G~L~Y~DVS~GklVa~~----~t~~G~------- 253 (545)
T KOG1272|consen 186 AVAQKKYVYVYDNNGTELHCLKRHIRVARLEFLPYH-FLLVAASEAGFLKYQDVSTGKLVASI----RTGAGR------- 253 (545)
T ss_pred HhhhhceEEEecCCCcEEeehhhcCchhhhcccchh-heeeecccCCceEEEeechhhhhHHH----HccCCc-------
Confidence 666678899999765553222 2457889999986 78899999999999999999764321 111100
Q ss_pred cCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-c
Q psy12356 165 PESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-D 243 (400)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~ 243 (400)
.+...-.|-......|...|+|.||.-....-. -.+..|.++|.+|++.|+|+|+|++ -
T Consensus 254 ----~~vm~qNP~NaVih~GhsnGtVSlWSP~skePL----------------vKiLcH~g~V~siAv~~~G~YMaTtG~ 313 (545)
T KOG1272|consen 254 ----TDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPL----------------VKILCHRGPVSSIAVDRGGRYMATTGL 313 (545)
T ss_pred ----cchhhcCCccceEEEcCCCceEEecCCCCcchH----------------HHHHhcCCCcceEEECCCCcEEeeccc
Confidence 000001122223445667899999976643211 0134688999999999999999975 5
Q ss_pred CCeEEEEeCCCCCCceeee
Q psy12356 244 YLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 244 D~tIklWD~~~~~~~l~~~ 262 (400)
|..+||||+++-.. ++++
T Consensus 314 Dr~~kIWDlR~~~q-l~t~ 331 (545)
T KOG1272|consen 314 DRKVKIWDLRNFYQ-LHTY 331 (545)
T ss_pred ccceeEeeeccccc-ccee
Confidence 99999999998654 4443
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.8e-10 Score=104.65 Aligned_cols=107 Identities=18% Similarity=0.248 Sum_probs=77.7
Q ss_pred EEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE
Q psy12356 8 ASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL 87 (400)
Q Consensus 8 ~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ 87 (400)
-+.|||+|++||+++.- .+.|-|.++ |+-|.- +.+ -++|..+.|..|+. .++.
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~t-----------------lq~~ql-f~c------ldki~yieW~ads~--~ilC 65 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSET-----------------LQLHQL-FLC------LDKIVYIEWKADSC--HILC 65 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccch-----------------hhHHHH-HHH------HHHhhheeeeccce--eeee
Confidence 36899999999999855 788888764 222210 001 14577899998763 5554
Q ss_pred -eeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 88 -STNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 88 -ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
...|+.|.+|++..-+ +.+-...+.+++|+|+|..++.++.-|-.|.+|.+.+.
T Consensus 66 ~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~ 124 (447)
T KOG4497|consen 66 VAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQ 124 (447)
T ss_pred eeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccc
Confidence 4679999999997654 22334568899999998677777777999999998776
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.5e-09 Score=104.96 Aligned_cols=106 Identities=12% Similarity=0.140 Sum_probs=68.1
Q ss_pred eEEEEEECCCCCeEEEecCC---CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELLATGDKG---GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+.+.+|||||+.||.++.+ ..|++||+.++. .+.+..+.++ ....+|+||+.
T Consensus 205 ~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~---------~~~l~~~~g~---------------~~~~~~SpDG~ 260 (433)
T PRK04922 205 PILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQ---------RELVASFRGI---------------NGAPSFSPDGR 260 (433)
T ss_pred ccccccCCCCCCEEEEEecCCCCcEEEEEECCCCC---------EEEeccCCCC---------------ccCceECCCCC
Confidence 46788999999999988743 469999997542 1122222221 33578999874
Q ss_pred CceEEE-eeCCC--eEEEEEccCCCcccc---cccEEEEEEecCCCCEEEEEeC-CCeEEEEe
Q psy12356 82 QAHFLL-STNDQ--SFNIVDIKPTNMEEL---NEVITAAEFHPIDCNLFVYSSS-KGTIRLCD 137 (400)
Q Consensus 82 ~~~~l~-ss~D~--tI~lWd~~~~~~~~~---~~~V~sv~f~p~~~~~las~s~-Dg~i~lWD 137 (400)
+++. .+.++ .|.+||+.+++.+.+ .......+|+|++ +.|+.++. ++...||.
T Consensus 261 --~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG-~~l~f~sd~~g~~~iy~ 320 (433)
T PRK04922 261 --RLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDG-KSIYFTSDRGGRPQIYR 320 (433)
T ss_pred --EEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCC-CEEEEEECCCCCceEEE
Confidence 5554 34444 699999988875433 2345678999986 56666654 45444443
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-09 Score=111.52 Aligned_cols=212 Identities=15% Similarity=0.223 Sum_probs=129.6
Q ss_pred eEEEEEEC--CCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeee---ccCcchhhcccccccceeeEEEEEec
Q psy12356 5 MREASQRF--SDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ---SHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 5 ~v~~v~fs--pdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~---~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
.|+.+.+= .|-.+|.+|+.||.||||+-.... .+..+++..+. ++.+. ..+.. .-+.|...
T Consensus 1111 ~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~------~~~~eLVTaw~~Ls~~~~~-------~r~~~-~v~dWqQ~ 1176 (1387)
T KOG1517|consen 1111 RVSDLELINEQDDALLLTASSDGVIRIWKDYADK------WKKPELVTAWSSLSDQLPG-------ARGTG-LVVDWQQQ 1176 (1387)
T ss_pred ccceeeeecccchhheeeeccCceEEEecccccc------cCCceeEEeeccccccCcc-------CCCCC-eeeehhhh
Confidence 35566662 367899999999999999843211 11223333333 22111 11111 23567643
Q ss_pred cCCceEEEeeCCCeEEEEEccCCCc-cc----ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc------ccccc
Q psy12356 80 KNQAHFLLSTNDQSFNIVDIKPTNM-EE----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL------CDRHS 148 (400)
Q Consensus 80 ~~~~~~l~ss~D~tI~lWd~~~~~~-~~----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~------~~~~~ 148 (400)
.+++++++.-..|||||...... .. -...|++++-+..++++||.|-.||.||++|.|.... .+.|+
T Consensus 1177 --~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~ 1254 (1387)
T KOG1517|consen 1177 --SGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHN 1254 (1387)
T ss_pred --CCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccC
Confidence 34777777788999999977652 21 2345777776666678999999999999999998732 01111
Q ss_pred ceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccc--c-
Q psy12356 149 KCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEII--S- 225 (400)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~- 225 (400)
... .+.++.+. ..+.+ ...+++.+|.|++||+|.... ..+.. +..|. +
T Consensus 1255 ~~~------~Iv~~slq--------~~G~~-elvSgs~~G~I~~~DlR~~~~-e~~~~-------------iv~~~~yGs 1305 (1387)
T KOG1517|consen 1255 DVE------PIVHLSLQ--------RQGLG-ELVSGSQDGDIQLLDLRMSSK-ETFLT-------------IVAHWEYGS 1305 (1387)
T ss_pred Ccc------cceeEEee--------cCCCc-ceeeeccCCeEEEEecccCcc-cccce-------------eeeccccCc
Confidence 110 01111111 11122 366778999999999997411 11100 11222 3
Q ss_pred CeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeeec
Q psy12356 226 SISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 226 ~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~ 263 (400)
..+++..+++..++|+++-+.|+||++... .+..+.
T Consensus 1306 ~lTal~VH~hapiiAsGs~q~ikIy~~~G~--~l~~~k 1341 (1387)
T KOG1517|consen 1306 ALTALTVHEHAPIIASGSAQLIKIYSLSGE--QLNIIK 1341 (1387)
T ss_pred cceeeeeccCCCeeeecCcceEEEEecChh--hhcccc
Confidence 488999999999999876699999999853 455554
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1e-08 Score=102.78 Aligned_cols=69 Identities=13% Similarity=0.262 Sum_probs=45.7
Q ss_pred eeeEEEEEeccCCceEEEee---CCCeEEEEEccCCCccc---ccccEEEEEEecCCCCEEEEE-eCCC--eEEEEeccc
Q psy12356 70 KINKIRWLRRKNQAHFLLST---NDQSFNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYS-SSKG--TIRLCDMRA 140 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss---~D~tI~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~-s~Dg--~i~lWD~~~ 140 (400)
.+...+|+||++ +++..+ .+..|.+||+.+|+.+. ....+.+++|+||| +.|+.. +.++ .|.+||+.+
T Consensus 200 ~~~~p~wSPDG~--~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG-~~La~~~~~~g~~~I~~~d~~t 276 (429)
T PRK03629 200 PLMSPAWSPDGS--KLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDG-SKLAFALSKTGSLNLYVMDLAS 276 (429)
T ss_pred ceeeeEEcCCCC--EEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCC-CEEEEEEcCCCCcEEEEEECCC
Confidence 377899999985 555432 35689999998886322 23345678999987 455544 4444 466777765
Q ss_pred c
Q psy12356 141 A 141 (400)
Q Consensus 141 ~ 141 (400)
+
T Consensus 277 g 277 (429)
T PRK03629 277 G 277 (429)
T ss_pred C
Confidence 5
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-08 Score=102.57 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=69.1
Q ss_pred eEEEEEECCCCCeEEEecCC---CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELLATGDKG---GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+.+.+|||||+.||..+.+ ..|++||+.+++ ...+..+.++ +...+|+||+.
T Consensus 197 ~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~---------~~~l~~~~g~---------------~~~~~~SPDG~ 252 (427)
T PRK02889 197 PIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGR---------RRVVANFKGS---------------NSAPAWSPDGR 252 (427)
T ss_pred CcccceEcCCCCEEEEEEccCCCcEEEEEECCCCC---------EEEeecCCCC---------------ccceEECCCCC
Confidence 46788999999999987643 359999997642 1122222222 34688999974
Q ss_pred CceEEE-eeCCCeEEEEEc--cCCCcccc---cccEEEEEEecCCCCEEEEEeC-CCeEEEEecc
Q psy12356 82 QAHFLL-STNDQSFNIVDI--KPTNMEEL---NEVITAAEFHPIDCNLFVYSSS-KGTIRLCDMR 139 (400)
Q Consensus 82 ~~~~l~-ss~D~tI~lWd~--~~~~~~~~---~~~V~sv~f~p~~~~~las~s~-Dg~i~lWD~~ 139 (400)
+++. .+.++..+||.+ .++..+.+ .....+.+|+||| +.++..+. ++...||.+.
T Consensus 253 --~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG-~~l~f~s~~~g~~~Iy~~~ 314 (427)
T PRK02889 253 --TLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDG-RSIYFTSDRGGAPQIYRMP 314 (427)
T ss_pred --EEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCC-CEEEEEecCCCCcEEEEEE
Confidence 5654 466777677654 44443322 2345678899986 55665554 5667777654
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.4e-09 Score=98.57 Aligned_cols=157 Identities=14% Similarity=0.198 Sum_probs=103.0
Q ss_pred eEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
-+++..|.- |-++|.++|.|.++.|||++.+. ...+...+-+|. +.|..|+|...+. .
T Consensus 152 PlTSFDWne~dp~~igtSSiDTTCTiWdie~~~--------~~~vkTQLIAHD------------KEV~DIaf~~~s~-~ 210 (364)
T KOG0290|consen 152 PLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGV--------SGTVKTQLIAHD------------KEVYDIAFLKGSR-D 210 (364)
T ss_pred cccccccccCCcceeEeecccCeEEEEEEeecc--------ccceeeEEEecC------------cceeEEEeccCcc-c
Confidence 355666764 88999999999999999998642 111222344565 5599999998553 4
Q ss_pred eEEEeeCCCeEEEEEccCCCc-----ccc--cccEEEEEEecCCCCEEEEEeCC-CeEEEEecccccccccccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM-----EEL--NEVITAAEFHPIDCNLFVYSSSK-GTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~-----~~~--~~~V~sv~f~p~~~~~las~s~D-g~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.|++.+.||++|++|++.-+. +.. ....--++|++++.+++|+-..| ..|.+-|+|..
T Consensus 211 ~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P-------------- 276 (364)
T KOG0290|consen 211 VFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVP-------------- 276 (364)
T ss_pred eEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCC--------------
Confidence 677789999999999976441 110 12334455665555555554332 24444444443
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
... +.. +.+|.+.|+.|+|.|.
T Consensus 277 -------------------------------------------~tp---va~------------L~~H~a~VNgIaWaPh 298 (364)
T KOG0290|consen 277 -------------------------------------------CTP---VAR------------LRNHQASVNGIAWAPH 298 (364)
T ss_pred -------------------------------------------Ccc---eeh------------hhcCcccccceEecCC
Confidence 110 001 3478899999999997
Q ss_pred Cc-EEEE-ecCCeEEEEeCCC
Q psy12356 236 GR-YMIS-RDYLCVKVWDLHM 254 (400)
Q Consensus 236 g~-~las-~~D~tIklWD~~~ 254 (400)
.. .|.+ ++|..+-|||+..
T Consensus 299 S~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 299 SSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred CCceeeecCCcceEEEEeccc
Confidence 55 5665 5679999999985
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.8e-09 Score=103.71 Aligned_cols=198 Identities=12% Similarity=0.116 Sum_probs=112.2
Q ss_pred eEEEEEECCCCCeEEEec---CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELLATGD---KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s---~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+.+.+|||||+.||..+ .+..|++|++.+++ .+.+..+.+| +..++|+||+.
T Consensus 200 ~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~---------~~~l~~~~~~---------------~~~~~~SPDG~ 255 (429)
T PRK03629 200 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA---------VRQVASFPRH---------------NGAPAFSPDGS 255 (429)
T ss_pred ceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC---------eEEccCCCCC---------------cCCeEECCCCC
Confidence 467899999999999764 34579999987542 1223333333 23578999984
Q ss_pred CceEEEe-eCCC--eEEEEEccCCCcccc---cccEEEEEEecCCCCEEEEEeC-CCeEEEE--ecccccccccccceec
Q psy12356 82 QAHFLLS-TNDQ--SFNIVDIKPTNMEEL---NEVITAAEFHPIDCNLFVYSSS-KGTIRLC--DMRAAALCDRHSKCLI 152 (400)
Q Consensus 82 ~~~~l~s-s~D~--tI~lWd~~~~~~~~~---~~~V~sv~f~p~~~~~las~s~-Dg~i~lW--D~~~~~~~~~~~~~~~ 152 (400)
+++.+ +.++ .|.+||++++..+.+ ...+...+|+|++ +.|++++. ++..+|| |+.++...+ +.
T Consensus 256 --~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG-~~I~f~s~~~g~~~Iy~~d~~~g~~~~-----lt 327 (429)
T PRK03629 256 --KLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDS-QNLAYTSDQAGRPQVYKVNINGGAPQR-----IT 327 (429)
T ss_pred --EEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCC-CEEEEEeCCCCCceEEEEECCCCCeEE-----ee
Confidence 55543 3344 689999988874332 2356789999986 56766665 4555666 454442110 00
Q ss_pred cCcccceeceeccCchhhhhhcccCccee-ecCC--CCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEE
Q psy12356 153 EGTNCNCQGLIVPESKREERQSSQNRREK-EDNR--RKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISD 229 (400)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 229 (400)
. ....... ...+|++... .... ....|.+||+.++.. +.+. . ......
T Consensus 328 ~-~~~~~~~----------~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-----~~Lt------------~-~~~~~~ 378 (429)
T PRK03629 328 W-EGSQNQD----------ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-----QVLT------------D-TFLDET 378 (429)
T ss_pred c-CCCCccC----------EEECCCCCEEEEEEccCCCceEEEEECCCCCe-----EEeC------------C-CCCCCC
Confidence 0 0000001 1223554322 2222 234678888876532 1111 0 012346
Q ss_pred EEECCCCcEEEE-ecCC---eEEEEeCCCCCCceeeecCC
Q psy12356 230 VKISNSGRYMIS-RDYL---CVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 230 v~fSpdg~~las-~~D~---tIklWD~~~~~~~l~~~~~h 265 (400)
..|||||++|+. +.++ .+.+|++... ..+.+.+|
T Consensus 379 p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~--~~~~l~~~ 416 (429)
T PRK03629 379 PSIAPNGTMVIYSSSQGMGSVLNLVSTDGR--FKARLPAT 416 (429)
T ss_pred ceECCCCCEEEEEEcCCCceEEEEEECCCC--CeEECccC
Confidence 789999999884 4443 4778888632 34555444
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.3e-09 Score=109.26 Aligned_cols=262 Identities=16% Similarity=0.177 Sum_probs=165.4
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+-+.++..+|.|+-+|.++.-| ..+-|++..-. ..+.+ .|-.. -.|..++|+|.....
T Consensus 25 ~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~-------ppr~l----~h~tp----------w~vad~qws~h~a~~ 82 (1081)
T KOG0309|consen 25 GGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFT-------PPRWL----HHITP----------WQVADVQWSPHPAKP 82 (1081)
T ss_pred CcccceeeccccchhhhhhhcC-eEEEeccCCCC-------Cceee----eccCc----------chhcceecccCCCCc
Confidence 4467889999999999999887 45677775321 11222 23211 126678888875444
Q ss_pred eEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.-+++.+....-+|.+.... +.+|...|+.+.|+|+....+|+++.|-.+..||+|+...
T Consensus 83 ~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~------------- 149 (1081)
T KOG0309|consen 83 YWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR------------- 149 (1081)
T ss_pred eeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCc-------------
Confidence 55555444445688886433 2356778999999999999999999999999999998721
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC-C
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN-S 235 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp-d 235 (400)
-+..|+.- | .....|+|+. +
T Consensus 150 --------------------------------p~ys~~~w--------------------------~-s~asqVkwnyk~ 170 (1081)
T KOG0309|consen 150 --------------------------------PFYSTSSW--------------------------R-SAASQVKWNYKD 170 (1081)
T ss_pred --------------------------------ceeeeecc--------------------------c-ccCceeeecccC
Confidence 01111110 0 1234578875 6
Q ss_pred CcEEEEecCCeEEEEeCCCCCCceeeecCCCcCCC---------CcccCCCCCceeecCcccccceeeccCccceecccc
Q psy12356 236 GRYMISRDYLCVKVWDLHMESRPVETYPTHTKEEN---------GQLRDPSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 236 g~~las~~D~tIklWD~~~~~~~l~~~~~h~~~~~---------g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
+..||++..+.|++||.+.+..|+..+.+|....+ +.+.+++.+++++.|+++.... ..+++ ..-
T Consensus 171 p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~----e~~~~--vtt 244 (1081)
T KOG0309|consen 171 PNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT----ESKRT--VTT 244 (1081)
T ss_pred cchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccc----cccee--ccc
Confidence 77888888889999999999889999988853322 2334678899999998742210 01111 112
Q ss_pred ccceEEEEEcCCCc--EEee----------cccc-------------hhh-cccccceeEEEE--------ccCCC--EE
Q psy12356 307 TYHINSISVNSDQL--TVEA----------SPRG-------------IFA-DAHTYHISSTSV--------NSDQE--TY 350 (400)
Q Consensus 307 ~~~i~~i~~s~dg~--~~~~----------~~~~-------------~~~-~gh~~~V~~i~f--------spDg~--~l 350 (400)
.+.||--++-|=|. .+.. .+.+ ++. .||.+.|...-| .-|.+ +|
T Consensus 245 ~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQL 324 (1081)
T KOG0309|consen 245 NFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQL 324 (1081)
T ss_pred cCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeE
Confidence 34455555555332 2211 0110 000 388877654333 33444 68
Q ss_pred EE-ecCCeEEEEeCcc
Q psy12356 351 LS-ADDLRINLWHLEI 365 (400)
Q Consensus 351 as-~~D~~i~lW~~~~ 365 (400)
++ +.|+++|+|.++.
T Consensus 325 VTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 325 VTWSKDQTLRLWPIDS 340 (1081)
T ss_pred EEeecCCceEeeeccH
Confidence 88 6899999999865
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.4e-08 Score=104.00 Aligned_cols=277 Identities=15% Similarity=0.152 Sum_probs=148.5
Q ss_pred EEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC-ceEEE
Q psy12356 9 SQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ-AHFLL 87 (400)
Q Consensus 9 v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~-~~~l~ 87 (400)
-.||+|++++..+. +..|+||.+.++. +++.+.+|++. +..+.+.|.... ..+.+
T Consensus 22 avfSnD~k~l~~~~-~~~V~VyS~~Tg~-----------~i~~l~~~~a~------------l~s~~~~~~~~~~~~~~~ 77 (792)
T KOG1963|consen 22 AVFSNDAKFLFLCT-GNFVKVYSTATGE-----------CITSLEDHTAP------------LTSVIVLPSSENANYLIV 77 (792)
T ss_pred cccccCCcEEEEee-CCEEEEEecchHh-----------hhhhcccccCc------------cceeeecCCCccceEEEE
Confidence 45999999999776 6689999998642 45678888864 677777776532 34556
Q ss_pred eeCCCeEEEEEccCCCc-cc--ccccEEEEEEecCCC--CEEEEEeC-CCe-EEEEecccccccccccceeccCccccee
Q psy12356 88 STNDQSFNIVDIKPTNM-EE--LNEVITAAEFHPIDC--NLFVYSSS-KGT-IRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 88 ss~D~tI~lWd~~~~~~-~~--~~~~V~sv~f~p~~~--~~las~s~-Dg~-i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
++.||+|++||...+.+ +. ....+.++.+.|... ..+++.+. |.. +.........+... ..+.+......
T Consensus 78 ~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~--~~~~t~~~~~~- 154 (792)
T KOG1963|consen 78 CSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSR--FVLATFDSAKG- 154 (792)
T ss_pred EecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeecccceeeeecccccccceee--eEeeeccccch-
Confidence 78999999999988763 21 112232322222110 11222221 211 11111111100000 00000000000
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
+...-......+...+.+-..+ -..+..+.+|...... +..... ..-..|+-.++++++||+++++|
T Consensus 155 d~~~~~~~~~~I~~~~~ge~~~-i~~~~~~~~~~v~~~~------~~~~~~------~~~~~Htf~~t~~~~spn~~~~A 221 (792)
T KOG1963|consen 155 DFLKEHQEPKSIVDNNSGEFKG-IVHMCKIHIYFVPKHT------KHTSSR------DITVHHTFNITCVALSPNERYLA 221 (792)
T ss_pred hhhhhhcCCccEEEcCCceEEE-EEEeeeEEEEEecccc------eeeccc------hhhhhhcccceeEEeccccceEE
Confidence 0000000000111112221111 1135677778776522 111100 01124666689999999999999
Q ss_pred Ee-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCC
Q psy12356 241 SR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQ 319 (400)
Q Consensus 241 s~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg 319 (400)
++ .||.|.+|.-... ....+. .+ ++-| |...|++++||+||
T Consensus 222 a~d~dGrI~vw~d~~~--~~~~~t------------------~t-----------------~lHW-H~~~V~~L~fS~~G 263 (792)
T KOG1963|consen 222 AGDSDGRILVWRDFGS--SDDSET------------------CT-----------------LLHW-HHDEVNSLSFSSDG 263 (792)
T ss_pred EeccCCcEEEEecccc--cccccc------------------ce-----------------EEEe-cccccceeEEecCC
Confidence 87 4899999954421 001111 11 1123 55678889999999
Q ss_pred cEEeeccc-------------chhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 320 LTVEASPR-------------GIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 320 ~~~~~~~~-------------~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
.+|.+++. +.+.+.=..+|..+++|||+.+.+.. .|+.|.+-..
T Consensus 264 ~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~ 321 (792)
T KOG1963|consen 264 AYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA 321 (792)
T ss_pred ceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence 88765442 23334445789999999999988875 7998888776
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.5e-10 Score=107.22 Aligned_cols=115 Identities=16% Similarity=0.206 Sum_probs=89.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|+..+|||||++||+.|.||..||||..+. +++..++.+ + ++..+|+||||+.
T Consensus 291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~-----------eLlg~mkSY------F------GGLLCvcWSPDGK-- 345 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQ-----------ELLGVMKSY------F------GGLLCVCWSPDGK-- 345 (636)
T ss_pred ccccceeEcCCCceEEEEecCceEEEeeccHH-----------HHHHHHHhh------c------cceEEEEEcCCcc--
Confidence 46888999999999999999999999998753 222223222 1 3478999999984
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCC---------------------------------------
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPID--------------------------------------- 120 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~--------------------------------------- 120 (400)
.+++++.|--|.||-+..++. ++|.+.|+.|+|.|.-
T Consensus 346 yIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s 425 (636)
T KOG2394|consen 346 YIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLS 425 (636)
T ss_pred EEEecCCcceEEEEEeccceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCccc
Confidence 566689999999999988773 5788899999998310
Q ss_pred --------CCEEEEEeCCCeEEEEecccccc
Q psy12356 121 --------CNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 121 --------~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
..+|.|.+.|..+-|||+....+
T Consensus 426 ~~~~~~~v~YRfGSVGqDTqlcLWDlteD~L 456 (636)
T KOG2394|consen 426 SFNRINSVTYRFGSVGQDTQLCLWDLTEDVL 456 (636)
T ss_pred ccccccceEEEeecccccceEEEEecchhhc
Confidence 13688899999999999987654
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.8e-08 Score=98.30 Aligned_cols=173 Identities=13% Similarity=0.194 Sum_probs=101.1
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCc-----ccccccEEEEEEecCCC-CEEEEEeCCCeEEEEeccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNM-----EELNEVITAAEFHPIDC-NLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~-----~~~~~~V~sv~f~p~~~-~~las~s~Dg~i~lWD~~~~~ 142 (400)
+.|++++|+.+|. .++++|.|..+.|||.-..++ .+|...|-++.|=|... .+++||..|..|+++|+..-+
T Consensus 51 GCVN~LeWn~dG~--lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~ 128 (758)
T KOG1310|consen 51 GCVNCLEWNADGE--LLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSK 128 (758)
T ss_pred ceecceeecCCCC--EEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccccc
Confidence 6799999998874 566678899999999865442 35778899999988753 467888889999999998632
Q ss_pred ccccccceeccCcccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 143 LCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
....-.....+ ..+|+..+. ...-+...|+++ ..-+++.||+||-+|+|....|...-.. |. .+.+ ..
T Consensus 129 ~~~~d~~~~~~---~~~~~cht~--rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~---~~--~l~n-y~ 197 (758)
T KOG1310|consen 129 EGGMDHGMEET---TRCWSCHTD--RVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDC---PS--ILVN-YN 197 (758)
T ss_pred ccccccCccch---hhhhhhhhh--hhhheecCCCCCceEEEecCCcceeeecccCCccCCccccc---cH--HHHH-hc
Confidence 10000000000 011110000 001111223331 1223458999999999975444210000 00 0000 00
Q ss_pred ccccCeEEEEECCCCc-EEE-EecCCeEEEEeCCC
Q psy12356 222 EIISSISDVKISNSGR-YMI-SRDYLCVKVWDLHM 254 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~-~la-s~~D~tIklWD~~~ 254 (400)
...-...++..||... +|| +++|--+||+|.+.
T Consensus 198 ~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr 232 (758)
T KOG1310|consen 198 PQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRR 232 (758)
T ss_pred hhhheeeeeeecCCCCceEEecCCCchhhhhhhhh
Confidence 1112467899999655 555 45789999999874
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-09 Score=111.13 Aligned_cols=106 Identities=14% Similarity=0.189 Sum_probs=81.9
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC 144 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~ 144 (400)
..|.|+.|-..+ ..++++++|.-+|||-++++. +++|.+.|+.++.+.. ..++|++|.|..|++|.+..+..+
T Consensus 191 naVyca~fDrtg--~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~-n~~iaaaS~D~vIrvWrl~~~~pv 267 (1113)
T KOG0644|consen 191 NAVYCAIFDRTG--RYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSN-NTMIAAASNDKVIRVWRLPDGAPV 267 (1113)
T ss_pred hheeeeeecccc--ceEeecCccceeeeeeccchhhhccCCCCccccchhccchh-hhhhhhcccCceEEEEecCCCchH
Confidence 348888886544 367778999999999988775 5778888888888775 367788888999999998877210
Q ss_pred ccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccc
Q psy12356 145 DRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEII 224 (400)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 224 (400)
+.+.+|+
T Consensus 268 -------------------------------------------------------------------------svLrght 274 (1113)
T KOG0644|consen 268 -------------------------------------------------------------------------SVLRGHT 274 (1113)
T ss_pred -------------------------------------------------------------------------HHHhccc
Confidence 1134788
Q ss_pred cCeEEEEECCCCcEEEEecCCeEEEEeCC
Q psy12356 225 SSISDVKISNSGRYMISRDYLCVKVWDLH 253 (400)
Q Consensus 225 ~~V~~v~fSpdg~~las~~D~tIklWD~~ 253 (400)
+.|++++|||-- +++.|+|+++||.+
T Consensus 275 gavtaiafsP~~---sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 275 GAVTAIAFSPRA---SSSDDGTCRIWDAR 300 (1113)
T ss_pred cceeeeccCccc---cCCCCCceEecccc
Confidence 999999999965 45678999999998
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.1e-08 Score=85.72 Aligned_cols=121 Identities=13% Similarity=0.168 Sum_probs=81.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeee-eeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYS-TFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+-|+.++|. ..+|.+|+ ||.|+=|.-.+.... ..+.+... ...-|.. ..+ -..|+++-.-|.++
T Consensus 63 gpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es----~~~K~lwe~~~P~~~~------~~e-vPeINam~ldP~en- 127 (325)
T KOG0649|consen 63 GPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEES----LATKRLWEVKIPMQVD------AVE-VPEINAMWLDPSEN- 127 (325)
T ss_pred CCeeeeeee--hhheeecc-CceEEEeeehhhhhh----ccchhhhhhcCccccC------ccc-CCccceeEeccCCC-
Confidence 357788888 34777776 599999886543210 00100000 0001110 000 12378888887654
Q ss_pred ceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.++.++.|+.+.-||+++|. +++|+..|.+|.-.... ..++||++||++|+||++++
T Consensus 128 -Si~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~-~qilsG~EDGtvRvWd~kt~ 188 (325)
T KOG0649|consen 128 -SILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNAN-GQILSGAEDGTVRVWDTKTQ 188 (325)
T ss_pred -cEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccC-cceeecCCCccEEEEecccc
Confidence 77887899999999999997 46899999998873333 35799999999999999998
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.9e-08 Score=100.05 Aligned_cols=248 Identities=10% Similarity=0.095 Sum_probs=137.7
Q ss_pred eeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc-
Q psy12356 71 INKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD- 145 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~- 145 (400)
|+.++|-|||. +++.+. +..+.|+|...|. ++.|...|.+|+++.+| .+||||+.|..|-+|...-..+++
T Consensus 15 i~d~afkPDGs--qL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dG-krFASG~aDK~VI~W~~klEG~LkY 90 (1081)
T KOG1538|consen 15 INDIAFKPDGT--QLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDG-KRFASGSADKSVIIWTSKLEGILKY 90 (1081)
T ss_pred hheeEECCCCc--eEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCC-ceeccCCCceeEEEecccccceeee
Confidence 88999999985 566554 3567899998876 46788899999999985 799999999999999976554322
Q ss_pred cccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc
Q psy12356 146 RHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS 225 (400)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 225 (400)
.|+..+.--.-+.+. ...++++ =...-+|...+.... +. ....
T Consensus 91 SH~D~IQCMsFNP~~----------------h~LasCs---LsdFglWS~~qK~V~---------------K~---kss~ 133 (1081)
T KOG1538|consen 91 SHNDAIQCMSFNPIT----------------HQLASCS---LSDFGLWSPEQKSVS---------------KH---KSSS 133 (1081)
T ss_pred ccCCeeeEeecCchH----------------HHhhhcc---hhhccccChhhhhHH---------------hh---hhhe
Confidence 232222110000000 0011111 112334443332211 00 1125
Q ss_pred CeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeec-CCCcCCCCcc--cC---CCCCceeec--C----cccccce
Q psy12356 226 SISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYP-THTKEENGQL--RD---PSNITALRV--P----QIKPIEL 292 (400)
Q Consensus 226 ~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~-~h~~~~~g~~--~~---~~~~~~i~l--~----~~~~~~~ 292 (400)
.+.+++|..||+++|-+ .+|||.|-+-.... .+..-+ |..++|-=.+ .+ .+.+..+-+ | +|..-+.
T Consensus 134 R~~~CsWtnDGqylalG~~nGTIsiRNk~gEe-k~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG 212 (1081)
T KOG1538|consen 134 RIICCSWTNDGQYLALGMFNGTISIRNKNGEE-KVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSG 212 (1081)
T ss_pred eEEEeeecCCCcEEEEeccCceEEeecCCCCc-ceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecc
Confidence 68999999999999965 79999887654321 222211 1111110000 00 122222221 1 1111111
Q ss_pred eeccCccceeccccccceEEEEEcCCCcEEe-ecccchh---h--------cc-cccceeEEEEccCCCEEEEe-cCCeE
Q psy12356 293 TVEASPRRIFANAHTYHINSISVNSDQLTVE-ASPRGIF---A--------DA-HTYHISSTSVNSDQETYLSA-DDLRI 358 (400)
Q Consensus 293 ~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~-~~~~~~~---~--------~g-h~~~V~~i~fspDg~~las~-~D~~i 358 (400)
...+..+.+ .+.=..+++.|+|.++. +.+.+.+ . -| -..=|.+|+..|.|++++-+ .||||
T Consensus 213 ~~Igk~r~L-----~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTi 287 (1081)
T KOG1538|consen 213 KQIGKDRAL-----NFDPCCISYFTNGEYILLGGSDKQLSLFTRDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTI 287 (1081)
T ss_pred eeecccccC-----CCCchhheeccCCcEEEEccCCCceEEEeecCeEEeeccccceeEEEEEEccCCceEEEEEccCee
Confidence 111222211 12224678889998764 3332211 0 02 12358899999999999987 79999
Q ss_pred EEEeCcc
Q psy12356 359 NLWHLEI 365 (400)
Q Consensus 359 ~lW~~~~ 365 (400)
--+++-.
T Consensus 288 ACyNl~f 294 (1081)
T KOG1538|consen 288 ACYNLIF 294 (1081)
T ss_pred ehhhhHH
Confidence 8888643
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.2e-08 Score=97.98 Aligned_cols=110 Identities=9% Similarity=0.136 Sum_probs=73.6
Q ss_pred eEEEEEECCCCCeEEEecC---CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELLATGDK---GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~---Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+.+.+|||||+.||..+. +..|++||+.++. .+ .+..+. +.+...+|+||+.
T Consensus 203 ~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~---------~~---~l~~~~------------g~~~~~~~SPDG~ 258 (435)
T PRK05137 203 LVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQ---------RE---LVGNFP------------GMTFAPRFSPDGR 258 (435)
T ss_pred CeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCc---------EE---EeecCC------------CcccCcEECCCCC
Confidence 5778999999999998763 4689999997642 11 222222 1245678999874
Q ss_pred CceEEE-eeCCC--eEEEEEccCCCcccc---cccEEEEEEecCCCCEEEEEeC-CC--eEEEEecccc
Q psy12356 82 QAHFLL-STNDQ--SFNIVDIKPTNMEEL---NEVITAAEFHPIDCNLFVYSSS-KG--TIRLCDMRAA 141 (400)
Q Consensus 82 ~~~~l~-ss~D~--tI~lWd~~~~~~~~~---~~~V~sv~f~p~~~~~las~s~-Dg--~i~lWD~~~~ 141 (400)
+++. .+.++ .|.+||++++....+ .......+|+|++ +.++.++. ++ .|.+||+.++
T Consensus 259 --~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG-~~i~f~s~~~g~~~Iy~~d~~g~ 324 (435)
T PRK05137 259 --KVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDG-SQIVFESDRSGSPQLYVMNADGS 324 (435)
T ss_pred --EEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCC-CEEEEEECCCCCCeEEEEECCCC
Confidence 5554 44454 477779888774332 3345678999986 56666654 43 6777787665
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=7.3e-08 Score=88.60 Aligned_cols=153 Identities=14% Similarity=0.211 Sum_probs=102.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccC-cchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHE-PEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..|.+|.+++| +|+..- .++|.||...+. .+.++.+.--. | ++. ++..|..+
T Consensus 95 ~~I~~V~l~r~--riVvvl-~~~I~VytF~~n----------~k~l~~~et~~NP-----------kGl--C~~~~~~~- 147 (346)
T KOG2111|consen 95 SEIKAVKLRRD--RIVVVL-ENKIYVYTFPDN----------PKLLHVIETRSNP-----------KGL--CSLCPTSN- 147 (346)
T ss_pred cceeeEEEcCC--eEEEEe-cCeEEEEEcCCC----------hhheeeeecccCC-----------Cce--EeecCCCC-
Confidence 56888888877 566553 678999998742 12223332111 1 111 22334332
Q ss_pred ceEEE--eeCCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEeCCCeE-EEEecccccccccccceecc
Q psy12356 83 AHFLL--STNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSSSKGTI-RLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 83 ~~~l~--ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s~Dg~i-~lWD~~~~~~~~~~~~~~~~ 153 (400)
..+++ +-.-|.|+|-|+..... .-|.+.|.+++.+-+| .++||+|..||+ ||||.+++..+.
T Consensus 148 k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~G-t~vATaStkGTLIRIFdt~~g~~l~-------- 218 (346)
T KOG2111|consen 148 KSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQG-TLVATASTKGTLIRIFDTEDGTLLQ-------- 218 (346)
T ss_pred ceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCc-cEEEEeccCcEEEEEEEcCCCcEee--------
Confidence 24444 33579999999965443 3577889999999975 899999999975 999999984321
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
.+|-|. . ...|.+++||
T Consensus 219 ----------------------------------------E~RRG~----------------------d-~A~iy~iaFS 235 (346)
T KOG2111|consen 219 ----------------------------------------ELRRGV----------------------D-RADIYCIAFS 235 (346)
T ss_pred ----------------------------------------eeecCC----------------------c-hheEEEEEeC
Confidence 111111 0 1469999999
Q ss_pred CCCcEEEEec-CCeEEEEeCCCC
Q psy12356 234 NSGRYMISRD-YLCVKVWDLHME 255 (400)
Q Consensus 234 pdg~~las~~-D~tIklWD~~~~ 255 (400)
||+.+||.++ .||+.|+.++..
T Consensus 236 p~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 236 PNSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred CCccEEEEEcCCCeEEEEEeecC
Confidence 9999999654 599999999864
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.6e-07 Score=93.71 Aligned_cols=108 Identities=11% Similarity=0.112 Sum_probs=66.6
Q ss_pred EEEEEECCCCCeEEEecCC---CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 6 REASQRFSDGELLATGDKG---GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.+.+|||||++||.++.+ ..|++||+.++. .+ .+..+. ..+..++|+|++.
T Consensus 192 ~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~---------~~---~~~~~~------------~~~~~~~~spDg~- 246 (417)
T TIGR02800 192 ILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQ---------RE---KVASFP------------GMNGAPAFSPDGS- 246 (417)
T ss_pred eecccCCCCCCEEEEEEcCCCCcEEEEEECCCCC---------EE---EeecCC------------CCccceEECCCCC-
Confidence 6678899999999987644 479999987642 11 122221 1244678999874
Q ss_pred ceEEE-eeC--CCeEEEEEccCCCccc---ccccEEEEEEecCCCCEEEEEeC-CC--eEEEEeccc
Q psy12356 83 AHFLL-STN--DQSFNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYSSS-KG--TIRLCDMRA 140 (400)
Q Consensus 83 ~~~l~-ss~--D~tI~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~s~-Dg--~i~lWD~~~ 140 (400)
.++. .+. +..|.+||+.++..+. +.......+|+|++ +.|+.++. ++ .|.++|+.+
T Consensus 247 -~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg-~~l~~~s~~~g~~~iy~~d~~~ 311 (417)
T TIGR02800 247 -KLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDG-KSIAFTSDRGGSPQIYMMDADG 311 (417)
T ss_pred -EEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCC-CEEEEEECCCCCceEEEEECCC
Confidence 5554 333 3468899998776432 22334567899986 55655544 33 344444433
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.8e-08 Score=93.45 Aligned_cols=168 Identities=13% Similarity=0.079 Sum_probs=104.5
Q ss_pred cccceeeEEEEEeccCCceEEE-eeCCCeEEEEEccCCC---------c--ccccccEEEEEEecCCCCEEEEEeCCCeE
Q psy12356 66 EIEEKINKIRWLRRKNQAHFLL-STNDQSFNIVDIKPTN---------M--EELNEVITAAEFHPIDCNLFVYSSSKGTI 133 (400)
Q Consensus 66 ~~~~~V~~v~~sp~~~~~~~l~-ss~D~tI~lWd~~~~~---------~--~~~~~~V~sv~f~p~~~~~las~s~Dg~i 133 (400)
+|.+.|++|.|+..+ ++|+ ++.|..++||.++.-. + ..|.+.|-+++|+.- ...+.+|..+++|
T Consensus 54 ~H~GCiNAlqFS~N~---~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~-N~~~~SG~~~~~V 129 (609)
T KOG4227|consen 54 EHTGCINALQFSHND---RFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLE-NRFLYSGERWGTV 129 (609)
T ss_pred hhccccceeeeccCC---eEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccC-CeeEecCCCccee
Confidence 344679999999764 5665 6789999999986321 1 134567999999984 4566677779999
Q ss_pred EEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCC
Q psy12356 134 RLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPED 213 (400)
Q Consensus 134 ~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~ 213 (400)
-+-|+.+...+..+...- .-..++++..+ |.....+..++++.|-+||+|.... ++..+-..
T Consensus 130 I~HDiEt~qsi~V~~~~~---~~~~VY~m~~~----------P~DN~~~~~t~~~~V~~~D~Rd~~~---~~~~~~~A-- 191 (609)
T KOG4227|consen 130 IKHDIETKQSIYVANENN---NRGDVYHMDQH----------PTDNTLIVVTRAKLVSFIDNRDRQN---PISLVLPA-- 191 (609)
T ss_pred EeeecccceeeeeecccC---cccceeecccC----------CCCceEEEEecCceEEEEeccCCCC---CCceeeec--
Confidence 999999874332211000 00112222222 2222333445799999999997532 11111111
Q ss_pred CCCcccccccccCeEEEEECCCCcEE-EEe-cCCeEEEEeCCCCCCceeeec
Q psy12356 214 PTNKSFFSEIISSISDVKISNSGRYM-ISR-DYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 214 ~~~~~~~~~h~~~V~~v~fSpdg~~l-as~-~D~tIklWD~~~~~~~l~~~~ 263 (400)
.......++.|+|....| ++. .-+-+-|||.++...++..+.
T Consensus 192 --------N~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~ 235 (609)
T KOG4227|consen 192 --------NSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRS 235 (609)
T ss_pred --------CCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhh
Confidence 112346789999976654 443 457899999999877765543
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=91.73 Aligned_cols=155 Identities=10% Similarity=0.100 Sum_probs=103.7
Q ss_pred eeeEEEEEeccCCceEEEee-CCCeEEEEEccCCC--------------cccccccEEEEEEecCCCCEEEEEeCCCeEE
Q psy12356 70 KINKIRWLRRKNQAHFLLST-NDQSFNIVDIKPTN--------------MEELNEVITAAEFHPIDCNLFVYSSSKGTIR 134 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss-~D~tI~lWd~~~~~--------------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~ 134 (400)
.|.+..|-.+-....+++++ .+|.+-+||+.++. ...|.+.|.++.|.+. .+.=++++.+-.+-
T Consensus 152 svmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~-~~rGisgga~dkl~ 230 (323)
T KOG0322|consen 152 SVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASS-CDRGISGGADDKLV 230 (323)
T ss_pred ceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechh-hcCCcCCCccccce
Confidence 35555543222122344455 59999999998862 1245678999999875 45668888888888
Q ss_pred EEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCC
Q psy12356 135 LCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDP 214 (400)
Q Consensus 135 lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 214 (400)
.|.+......-.+ ....++.+..+ .++...+++.+.|+++-|+.||+|.-|+..-.
T Consensus 231 ~~Sl~~s~gslq~-~~e~~lknpGv----------~gvrIRpD~KIlATAGWD~RiRVyswrtl~pL------------- 286 (323)
T KOG0322|consen 231 MYSLNHSTGSLQI-RKEITLKNPGV----------SGVRIRPDGKILATAGWDHRIRVYSWRTLNPL------------- 286 (323)
T ss_pred eeeeccccCcccc-cceEEecCCCc----------cceEEccCCcEEeecccCCcEEEEEeccCCch-------------
Confidence 8888754210000 01111222222 22344588889999999999999998865321
Q ss_pred CCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeC
Q psy12356 215 TNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDL 252 (400)
Q Consensus 215 ~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~ 252 (400)
..+..|.+.|++|+||||..++|+ +.|+.|-||++
T Consensus 287 ---AVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 287 ---AVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ---hhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 124468899999999999999986 57999999986
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.6e-07 Score=83.45 Aligned_cols=200 Identities=15% Similarity=0.146 Sum_probs=109.2
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
..+++|+.|-.-.|.|..+| .|||+.+.-+. .. .+.+ +. . ++.-+.-.--.+ .+
T Consensus 8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke------~~---~r~~--~~-~-----------G~~~veMLfR~N--~l 61 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKE------SA---SRQF--ID-G-----------GFKIVEMLFRSN--YL 61 (346)
T ss_pred eeEEEEccCCceEEEEecCc-eEEEecCchhh------hh---hhcc--cc-C-----------chhhhhHhhhhc--eE
Confidence 34699999998888776555 89999874210 00 0001 10 0 000000000011 23
Q ss_pred E-EeeCC------CeEEEEEccCCC-cc--cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc-cccccccceeccC
Q psy12356 86 L-LSTND------QSFNIVDIKPTN-ME--ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA-ALCDRHSKCLIEG 154 (400)
Q Consensus 86 l-~ss~D------~tI~lWd~~~~~-~~--~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~-~~~~~~~~~~~~~ 154 (400)
+ +++.+ +.+-|||=.... .. .....|.+|.+.++ .++.. ..+.|.+|..... ++++. +.+.
T Consensus 62 aLVGGg~~pky~pNkviIWDD~k~~~i~el~f~~~I~~V~l~r~---riVvv-l~~~I~VytF~~n~k~l~~----~et~ 133 (346)
T KOG2111|consen 62 ALVGGGSRPKYPPNKVIIWDDLKERCIIELSFNSEIKAVKLRRD---RIVVV-LENKIYVYTFPDNPKLLHV----IETR 133 (346)
T ss_pred EEecCCCCCCCCCceEEEEecccCcEEEEEEeccceeeEEEcCC---eEEEE-ecCeEEEEEcCCChhheee----eecc
Confidence 3 34433 478999932222 12 23578999999885 34433 5678999997643 22211 1111
Q ss_pred cccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 155 TNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
. +..++.... ..........-|..-|.|+|-|+...... ....+.+|.+.|.+++.+-
T Consensus 134 ~--NPkGlC~~~------~~~~k~~LafPg~k~GqvQi~dL~~~~~~--------------~p~~I~AH~s~Iacv~Ln~ 191 (346)
T KOG2111|consen 134 S--NPKGLCSLC------PTSNKSLLAFPGFKTGQVQIVDLASTKPN--------------APSIINAHDSDIACVALNL 191 (346)
T ss_pred c--CCCceEeec------CCCCceEEEcCCCccceEEEEEhhhcCcC--------------CceEEEcccCceeEEEEcC
Confidence 1 000110000 00000111222345689999998754320 0123568999999999999
Q ss_pred CCcEEEEe-cCCe-EEEEeCCCCCCceeee
Q psy12356 235 SGRYMISR-DYLC-VKVWDLHMESRPVETY 262 (400)
Q Consensus 235 dg~~las~-~D~t-IklWD~~~~~~~l~~~ 262 (400)
+|..+|++ ..|| |||||..++. +++++
T Consensus 192 ~Gt~vATaStkGTLIRIFdt~~g~-~l~E~ 220 (346)
T KOG2111|consen 192 QGTLVATASTKGTLIRIFDTEDGT-LLQEL 220 (346)
T ss_pred CccEEEEeccCcEEEEEEEcCCCc-Eeeee
Confidence 99999975 4555 9999999875 56665
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.1e-08 Score=96.60 Aligned_cols=133 Identities=11% Similarity=0.204 Sum_probs=85.8
Q ss_pred eEEEEEECCCCCeE-EEecCCCeEEEEEcCCCCccccC-----C-CCcceeeeeeeccCcc---hhhcccccccceeeEE
Q psy12356 5 MREASQRFSDGELL-ATGDKGGRVVIFQRDPLSKTSIP-----K-RGEYNVYSTFQSHEPE---FDYLKSLEIEEKINKI 74 (400)
Q Consensus 5 ~v~~v~fspdG~~L-as~s~Dg~I~iwd~~~~~~~~~~-----~-~~~~~~~~~~~~h~~~---~~~~~~~~~~~~V~~v 74 (400)
.|+|++|-|.++-+ ..+-.+|...++|..-......+ + .+.+.+. +...+... ..+... ...|+..
T Consensus 221 svT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~-t~ksk~~rNPv~~w~~~---~g~in~f 296 (636)
T KOG2394|consen 221 SVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAIL-TSKSKKTRNPVARWHIG---EGSINEF 296 (636)
T ss_pred ceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEe-eeeccccCCccceeEec---cccccce
Confidence 58999998844333 33456899999986432211111 1 1112111 11222110 011111 2358899
Q ss_pred EEEeccCCceEEEeeCCCeEEEEEccCCCcccc----cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc
Q psy12356 75 RWLRRKNQAHFLLSTNDQSFNIVDIKPTNMEEL----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC 144 (400)
Q Consensus 75 ~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~~~----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~ 144 (400)
+|+||+. .+++.|.|+.+||+|..+.++... -+...+|+|+||| ++|++|++|-.|.+|.+..++++
T Consensus 297 ~FS~DG~--~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDG-KyIvtGGEDDLVtVwSf~erRVV 367 (636)
T KOG2394|consen 297 AFSPDGK--YLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDG-KYIVTGGEDDLVTVWSFEERRVV 367 (636)
T ss_pred eEcCCCc--eEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCc-cEEEecCCcceEEEEEeccceEE
Confidence 9999874 666679999999999988664322 2457899999985 79999999999999999988654
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.1e-07 Score=93.77 Aligned_cols=166 Identities=13% Similarity=0.122 Sum_probs=103.4
Q ss_pred ECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec-----------
Q psy12356 11 RFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR----------- 79 (400)
Q Consensus 11 fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~----------- 79 (400)
+.|-+.|+|....||.++||++...+.+. ++.+...+.+.. .|. .+...+..+|.
T Consensus 1 ~~~~~~~~A~~~~~g~l~iw~t~~~~~~~-----e~~p~~~~s~t~---~~~------~w~L~~~~s~~k~~~~~~~~~~ 66 (541)
T KOG4547|consen 1 SPPALDYFALSTGDGRLRIWDTAKNQLQQ-----EFAPIASLSGTC---TYT------KWGLSADYSPMKWLSLEKAKKA 66 (541)
T ss_pred CCchhheEeecCCCCeEEEEEccCceeee-----eeccchhccCcc---eeE------EEEEEeccchHHHHhHHHHhhc
Confidence 35678899999999999999998653211 111111111100 000 00011111111
Q ss_pred cCCc-eEEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceec
Q psy12356 80 KNQA-HFLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLI 152 (400)
Q Consensus 80 ~~~~-~~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~ 152 (400)
..+. .++.+...|.|.++++..|++ ..|.+.|+++.++.+ ...|-|++.|+.+-.|+.....
T Consensus 67 s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~-~~ciyS~~ad~~v~~~~~~~~~---------- 135 (541)
T KOG4547|consen 67 SLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQR-LGCIYSVGADLKVVYILEKEKV---------- 135 (541)
T ss_pred cCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccc-cCceEecCCceeEEEEecccce----------
Confidence 0122 334466788888888888773 245677888877765 4567788888888888876662
Q ss_pred cCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 153 EGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
.+++|... ...+.+++.
T Consensus 136 ------------------------------------~~~~~~~~---------------------------~~~~~sl~i 152 (541)
T KOG4547|consen 136 ------------------------------------IIRIWKEQ---------------------------KPLVSSLCI 152 (541)
T ss_pred ------------------------------------eeeeeccC---------------------------CCccceEEE
Confidence 23333211 135788999
Q ss_pred CCCCcEEEEecCCeEEEEeCCCCCCceeeecCCC
Q psy12356 233 SNSGRYMISRDYLCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 233 Spdg~~las~~D~tIklWD~~~~~~~l~~~~~h~ 266 (400)
+|||++|++++ ++|++||+.+. ..+.+|.||.
T Consensus 153 s~D~~~l~~as-~~ik~~~~~~k-evv~~ftgh~ 184 (541)
T KOG4547|consen 153 SPDGKILLTAS-RQIKVLDIETK-EVVITFTGHG 184 (541)
T ss_pred cCCCCEEEecc-ceEEEEEccCc-eEEEEecCCC
Confidence 99999998653 68999999986 4678898884
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.4e-07 Score=94.79 Aligned_cols=70 Identities=17% Similarity=0.237 Sum_probs=46.9
Q ss_pred eeeEEEEEeccCCceEEEee---CCCeEEEEEccCCCccc---ccccEEEEEEecCCCCEEEEEeCCC--eEEEEecccc
Q psy12356 70 KINKIRWLRRKNQAHFLLST---NDQSFNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYSSSKG--TIRLCDMRAA 141 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss---~D~tI~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~s~Dg--~i~lWD~~~~ 141 (400)
.+...+|+||++ .++..+ .+..|.+||+.+++.+. ..+...+.+|+|++..++++.+.++ .|.+||+.++
T Consensus 205 ~v~~p~wSpDg~--~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g 282 (433)
T PRK04922 205 PILSPAWSPDGK--KLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSR 282 (433)
T ss_pred ccccccCCCCCC--EEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCC
Confidence 367889999975 566554 34579999998876422 2334557899998754444555555 4777777655
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.2e-06 Score=81.56 Aligned_cols=209 Identities=15% Similarity=0.158 Sum_probs=116.1
Q ss_pred EEEEEECCCCCeEEEecC----CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 6 REASQRFSDGELLATGDK----GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~----Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
...++++|++++|-++.. +|.|..|.+.+.. +..+.+....... .....|+.+|++.
T Consensus 39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~-------g~L~~~~~~~~~g------------~~p~~i~~~~~g~ 99 (345)
T PF10282_consen 39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDT-------GTLTLLNSVPSGG------------SSPCHIAVDPDGR 99 (345)
T ss_dssp ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTT-------TEEEEEEEEEESS------------SCEEEEEECTTSS
T ss_pred CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCc-------ceeEEeeeeccCC------------CCcEEEEEecCCC
Confidence 356889999999988866 5799999987531 2333333332111 2256788888763
Q ss_pred CceEEEee-CCCeEEEEEccC-CCccc-----------------ccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 82 QAHFLLST-NDQSFNIVDIKP-TNMEE-----------------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 82 ~~~~l~ss-~D~tI~lWd~~~-~~~~~-----------------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
.++++. .+++|.++++.. |.+.. ......++.|+|++..++++.-....|.++++....
T Consensus 100 --~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~ 177 (345)
T PF10282_consen 100 --FLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDT 177 (345)
T ss_dssp --EEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS
T ss_pred --EEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCC
Confidence 555554 589999999976 43211 012356899999875455544445689999987763
Q ss_pred --ccccccceeccCcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCccccccc-CCCCCCCcc
Q psy12356 143 --LCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFE-EPEDPTNKS 218 (400)
Q Consensus 143 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~-~~~~~~~~~ 218 (400)
+... ..+....+....++.+ .+++ .+......+++|.++++......-..++... .|.
T Consensus 178 ~~l~~~--~~~~~~~G~GPRh~~f----------~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~------ 239 (345)
T PF10282_consen 178 GKLTPV--DSIKVPPGSGPRHLAF----------SPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE------ 239 (345)
T ss_dssp -TEEEE--EEEECSTTSSEEEEEE-----------TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET------
T ss_pred ceEEEe--eccccccCCCCcEEEE----------cCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc------
Confidence 2110 0011111122222222 3443 4455556788999998872111000011110 000
Q ss_pred cccccccCeEEEEECCCCcEEEEe--cCCeEEEEeCCC
Q psy12356 219 FFSEIISSISDVKISNSGRYMISR--DYLCVKVWDLHM 254 (400)
Q Consensus 219 ~~~~h~~~V~~v~fSpdg~~las~--~D~tIklWD~~~ 254 (400)
.+.+ ......|++||||++|..+ +.++|-++++..
T Consensus 240 ~~~~-~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~ 276 (345)
T PF10282_consen 240 GFTG-ENAPAEIAISPDGRFLYVSNRGSNSISVFDLDP 276 (345)
T ss_dssp TSCS-SSSEEEEEE-TTSSEEEEEECTTTEEEEEEECT
T ss_pred cccc-cCCceeEEEecCCCEEEEEeccCCEEEEEEEec
Confidence 0001 1257789999999998754 468999999853
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.9e-08 Score=89.77 Aligned_cols=153 Identities=15% Similarity=0.293 Sum_probs=98.2
Q ss_pred eeEEEEEeccCCceEEEeeCCCeEEEEEccCCC---ccc-ccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccc
Q psy12356 71 INKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN---MEE-LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~---~~~-~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~ 146 (400)
+.-++|++.-. .++++..|-+||++|-.... ++. .+..|++++|-|.++..|+.|..-| |-+|.........
T Consensus 101 lr~~aWhqH~~--~fava~nddvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~- 176 (445)
T KOG2139|consen 101 LRGVAWHQHII--AFAVATNDDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNAN- 176 (445)
T ss_pred eeeEeechhhh--hhhhhccCcEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccc-
Confidence 56788987432 56678899999999965532 121 2356999999999888777776644 8899876542110
Q ss_pred ccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccC
Q psy12356 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISS 226 (400)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 226 (400)
+.. +.+ ...+.+.+..| +| .+
T Consensus 177 -------------------------------r~~---------------~~~--s~~~~qvl~~p----------gh-~p 197 (445)
T KOG2139|consen 177 -------------------------------RNI---------------RMM--STHHLQVLQDP----------GH-NP 197 (445)
T ss_pred -------------------------------ccc---------------ccc--cccchhheeCC----------CC-ce
Confidence 000 000 00111222222 45 68
Q ss_pred eEEEEECCCCcEEEEe--cCCeEEEEeCCCCC-CceeeecCC-----CcCCCCcc-cCCCCCceeecCc
Q psy12356 227 ISDVKISNSGRYMISR--DYLCVKVWDLHMES-RPVETYPTH-----TKEENGQL-RDPSNITALRVPQ 286 (400)
Q Consensus 227 V~~v~fSpdg~~las~--~D~tIklWD~~~~~-~~l~~~~~h-----~~~~~g~~-~~~~~~~~i~l~~ 286 (400)
|++++|.+||..|+++ +|..|+|||..++. .||.-+... .++|||.+ +++..+...++|.
T Consensus 198 Vtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~ 266 (445)
T KOG2139|consen 198 VTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQ 266 (445)
T ss_pred eeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeeh
Confidence 9999999999999975 58999999999873 344422221 25677775 3566677777773
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.9e-07 Score=87.95 Aligned_cols=180 Identities=14% Similarity=0.195 Sum_probs=111.8
Q ss_pred CceEEEeeCCCeEEEEEccCCCc-----ccc--cccEEEEEEecCCCCEEEEEeCC--CeEEEEecccccccccccceec
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTNM-----EEL--NEVITAAEFHPIDCNLFVYSSSK--GTIRLCDMRAAALCDRHSKCLI 152 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~~-----~~~--~~~V~sv~f~p~~~~~las~s~D--g~i~lWD~~~~~~~~~~~~~~~ 152 (400)
++.+++|-.+|.+.+|..+.+.. ..+ ...+..+.-+|....++|+|+.. ..+++||+....++-.
T Consensus 115 dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~------ 188 (412)
T KOG3881|consen 115 DGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWS------ 188 (412)
T ss_pred CCEEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeee------
Confidence 34788888899999999985542 111 13455666677777788889888 7889999877622100
Q ss_pred cCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 153 EGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
..+ + |+. .-+=.+. -+++++.|
T Consensus 189 -aKN-------v-----------pnD------~L~LrVP---------------------------------vW~tdi~F 210 (412)
T KOG3881|consen 189 -AKN-------V-----------PND------RLGLRVP---------------------------------VWITDIRF 210 (412)
T ss_pred -ccC-------C-----------CCc------cccceee---------------------------------eeecccee
Confidence 000 0 000 0011122 24566777
Q ss_pred CCC--CcEEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 233 SNS--GRYMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 233 Spd--g~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
-|. .+.+|+ +..+.+|+||.+.+++|+..|. +..+ .
T Consensus 211 l~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd---~~E~--------------------------------------~ 249 (412)
T KOG3881|consen 211 LEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFD---FLEN--------------------------------------P 249 (412)
T ss_pred cCCCCCceEEEEecceeEEEecCcccCcceeEec---cccC--------------------------------------c
Confidence 665 667776 5679999999999888988772 1111 1
Q ss_pred eEEEEEcCCCcEEeec------------ccchh---hcccccceeEEEEccCCCEEEEec-CCeEEEEeCccC
Q psy12356 310 INSISVNSDQLTVEAS------------PRGIF---ADAHTYHISSTSVNSDQETYLSAD-DLRINLWHLEIT 366 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~------------~~~~~---~~gh~~~V~~i~fspDg~~las~~-D~~i~lW~~~~~ 366 (400)
|.++..-|+|+.+.++ ..++. ..|-++.|.+|..+|.+++|||++ |..+||.|+++.
T Consensus 250 is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktr 322 (412)
T KOG3881|consen 250 ISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR 322 (412)
T ss_pred ceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccc
Confidence 1222222222221110 00110 136688999999999999999985 999999999973
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.9e-07 Score=89.71 Aligned_cols=110 Identities=12% Similarity=0.170 Sum_probs=67.2
Q ss_pred eEEEEEECCCCCeEEEecCC---CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELLATGDKG---GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+...+|||||++||..+.+ ..|.+||+.++. .+.+..+.++ +...+|+||+.
T Consensus 200 ~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~---------~~~l~~~~g~---------------~~~~~~SpDG~ 255 (430)
T PRK00178 200 PILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR---------REQITNFEGL---------------NGAPAWSPDGS 255 (430)
T ss_pred ceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC---------EEEccCCCCC---------------cCCeEECCCCC
Confidence 35778999999999987643 368889987642 1122222222 33578999874
Q ss_pred CceEEE-eeCC--CeEEEEEccCCCcccc---cccEEEEEEecCCCCEEEEEeC-CCe--EEEEecccc
Q psy12356 82 QAHFLL-STND--QSFNIVDIKPTNMEEL---NEVITAAEFHPIDCNLFVYSSS-KGT--IRLCDMRAA 141 (400)
Q Consensus 82 ~~~~l~-ss~D--~tI~lWd~~~~~~~~~---~~~V~sv~f~p~~~~~las~s~-Dg~--i~lWD~~~~ 141 (400)
+++. .+.+ ..|.+||++++....+ ........|+|++ +.++..+. ++. |.++|+.++
T Consensus 256 --~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg-~~i~f~s~~~g~~~iy~~d~~~g 321 (430)
T PRK00178 256 --KLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDG-RTLYFTSDRGGKPQIYKVNVNGG 321 (430)
T ss_pred --EEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCC-CEEEEEECCCCCceEEEEECCCC
Confidence 5554 3334 3688889988774322 2345677899986 45555443 443 444444333
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.4e-08 Score=102.82 Aligned_cols=153 Identities=15% Similarity=0.148 Sum_probs=111.8
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.|...-+.++++--++|+|+.-+.|.+|+..+.. ++. .+.||+ +.|.++.|+-++.
T Consensus 133 l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn----------~p~-~l~GHe------------G~iF~i~~s~dg~- 188 (967)
T KOG0974|consen 133 LYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDN----------KPI-RLKGHE------------GSIFSIVTSLDGR- 188 (967)
T ss_pred EEeEEEEeccCcEEEEEeccccccEEEEeccccC----------Ccc-eecccC------------CceEEEEEccCCc-
Confidence 4556667889999999999999999999987421 122 356887 4599999998774
Q ss_pred ceEEEeeCCCeEEEEEccCCCc-----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNM-----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~-----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
.+++.|.|.++|+|++++++. -+|...|+.+.|+|. .++|++.|-+.++|+.....+. . +.++..-
T Consensus 189 -~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n---~i~t~gedctcrvW~~~~~~l~-~----y~~h~g~ 259 (967)
T KOG0974|consen 189 -YIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN---RIITVGEDCTCRVWGVNGTQLE-V----YDEHSGK 259 (967)
T ss_pred -EEEEEecCcceeeeecccccccCcccccccceeEEEEeccc---eeEEeccceEEEEEecccceeh-h----hhhhhhc
Confidence 666789999999999998773 357888999999994 7999999999999976654321 1 1111122
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAA 198 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~ 198 (400)
.+|.+..+ ++.....++..|+++++||+...
T Consensus 260 ~iw~~~~~----------~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 260 GIWKIAVP----------IGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred ceeEEEEc----------CCceEEEeeccCcchhhhhhhcc
Confidence 33443333 23344566778999999998663
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.4e-07 Score=93.02 Aligned_cols=68 Identities=13% Similarity=0.155 Sum_probs=46.9
Q ss_pred eeeEEEEEeccCCceEEEeeC---CCeEEEEEccCCCccc---ccccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 70 KINKIRWLRRKNQAHFLLSTN---DQSFNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss~---D~tI~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
.+.+.+|+||++ +++..+. ...|.+||+.+++... ..+.+.+.+|+||+..++++.+.++..+||.+.
T Consensus 197 ~v~~p~wSPDG~--~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d 270 (427)
T PRK02889 197 PIISPAWSPDGT--KLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVN 270 (427)
T ss_pred CcccceEcCCCC--EEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEEEE
Confidence 367889999984 5665543 3569999998886422 234456889999874444456678877777654
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.3e-07 Score=91.26 Aligned_cols=156 Identities=11% Similarity=0.168 Sum_probs=96.6
Q ss_pred eEEEeeCCCeEEEEEccCCCc-c---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM-E---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~-~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
-+++++....|.=.+++.|.+ . .-.+.+++|..+|-+ .+|++|+.||.|..||.|....+.... +.....+ ..
T Consensus 147 Dly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~h-gLla~Gt~~g~VEfwDpR~ksrv~~l~-~~~~v~s-~p 223 (703)
T KOG2321|consen 147 DLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEH-GLLACGTEDGVVEFWDPRDKSRVGTLD-AASSVNS-HP 223 (703)
T ss_pred cEEEeecCcceEEEEccccccccccccccccceeeeecCcc-ceEEecccCceEEEecchhhhhheeee-cccccCC-Cc
Confidence 444444444566667777773 2 224679999999986 688999999999999999885432110 0000000 00
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccc--cCeEEEEECCC--
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEII--SSISDVKISNS-- 235 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~fSpd-- 235 (400)
..-.++ ..-.+.+..+++..+.|+..|.+-|||+|+.... + ...|. -+|..+.|-+.
T Consensus 224 g~~~~~--svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl------~-----------~kdh~~e~pi~~l~~~~~~~ 284 (703)
T KOG2321|consen 224 GGDAAP--SVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPL------L-----------VKDHGYELPIKKLDWQDTDQ 284 (703)
T ss_pred cccccC--cceEEEecCCceeEEeeccCCcEEEEEcccCCce------e-----------ecccCCccceeeecccccCC
Confidence 000000 0001122345777788889999999999986431 0 11233 36888999775
Q ss_pred CcEEEEecCCeEEEEeCCCCCCceeee
Q psy12356 236 GRYMISRDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 236 g~~las~~D~tIklWD~~~~~~~l~~~ 262 (400)
+..++|.+...+||||-.++. +...+
T Consensus 285 q~~v~S~Dk~~~kiWd~~~Gk-~~asi 310 (703)
T KOG2321|consen 285 QNKVVSMDKRILKIWDECTGK-PMASI 310 (703)
T ss_pred CceEEecchHHhhhcccccCC-ceeec
Confidence 557888888999999999874 44444
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.4e-07 Score=98.04 Aligned_cols=166 Identities=11% Similarity=0.151 Sum_probs=98.4
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC-----cc----c--ccccEEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN-----ME----E--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCD 137 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~-----~~----~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD 137 (400)
..|..++.++.+. ..++++|.||+||+||.++-. .+ - -...+..+.+-+.+ +.||.++.||.|++.+
T Consensus 1049 ~~v~k~a~s~~~~-s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~-~~~Av~t~DG~v~~~~ 1126 (1431)
T KOG1240|consen 1049 SAVIKLAVSSEHT-SLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNG-DQFAVSTKDGSVRVLR 1126 (1431)
T ss_pred ccccceeecCCCC-ceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCC-CeEEEEcCCCeEEEEE
Confidence 3477888877652 377889999999999986421 11 0 12456667766654 6789999999999999
Q ss_pred cccccccccccceeccCcccceeceeccCchhhhh------hcccCc-ceeecCCCCCeEEEeecccccccCcccccccC
Q psy12356 138 MRAAALCDRHSKCLIEGTNCNCQGLIVPESKREER------QSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEE 210 (400)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~ 210 (400)
+.........-.+.+. .++ +.++. +....+ ...+-+..-+.|-.||+|.....- ....
T Consensus 1127 id~~~~~~~~~~~~ri------~n~-----~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w----~lk~ 1191 (1431)
T KOG1240|consen 1127 IDHYNVSKRVATQVRI------PNL-----KKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAW----RLKN 1191 (1431)
T ss_pred ccccccccceeeeeec------ccc-----cCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHH----hhhc
Confidence 9873211110001100 000 00110 000111 112222357789999999753210 0110
Q ss_pred CCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 211 PEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 211 ~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
+ ..| +.|++++.+|-+.+++.| +.|.+-+||++-+ .++..+
T Consensus 1192 ~---------~~h-G~vTSi~idp~~~WlviGts~G~l~lWDLRF~-~~i~sw 1233 (1431)
T KOG1240|consen 1192 Q---------LRH-GLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFR-VPILSW 1233 (1431)
T ss_pred C---------ccc-cceeEEEecCCceEEEEecCCceEEEEEeecC-ceeecc
Confidence 0 123 789999999999999865 5799999999954 455443
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.3e-07 Score=89.99 Aligned_cols=104 Identities=15% Similarity=0.216 Sum_probs=64.0
Q ss_pred EEEEEECCCCCeEEEecC-CC--eEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 6 REASQRFSDGELLATGDK-GG--RVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~-Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.+.+|||||+.||..+. ++ .|++||+.+++ .+.+..+.++ ....+|+||+.
T Consensus 220 ~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~---------~~~lt~~~g~---------------~~~~~wSPDG~- 274 (448)
T PRK04792 220 LMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQV---------REKVTSFPGI---------------NGAPRFSPDGK- 274 (448)
T ss_pred ccCceECCCCCEEEEEEecCCCcEEEEEECCCCC---------eEEecCCCCC---------------cCCeeECCCCC-
Confidence 457899999999997654 33 58888887542 1222222222 23578999974
Q ss_pred ceEEE-eeCCC--eEEEEEccCCCcccc---cccEEEEEEecCCCCEEEEEeC-CCeEEEE
Q psy12356 83 AHFLL-STNDQ--SFNIVDIKPTNMEEL---NEVITAAEFHPIDCNLFVYSSS-KGTIRLC 136 (400)
Q Consensus 83 ~~~l~-ss~D~--tI~lWd~~~~~~~~~---~~~V~sv~f~p~~~~~las~s~-Dg~i~lW 136 (400)
.++. .+.++ .|.+||+++++.+.+ .......+|+|++ +.++..+. ++...||
T Consensus 275 -~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG-~~I~f~s~~~g~~~Iy 333 (448)
T PRK04792 275 -KLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDG-KSLIFTSERGGKPQIY 333 (448)
T ss_pred -EEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCC-CEEEEEECCCCCceEE
Confidence 5654 45555 477788887764332 2345678999986 45555443 4443333
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=2e-07 Score=97.19 Aligned_cols=158 Identities=15% Similarity=0.114 Sum_probs=104.7
Q ss_pred EECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEee
Q psy12356 10 QRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLST 89 (400)
Q Consensus 10 ~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss 89 (400)
.+.-+.+++|.+..+..+.|||..+.. ++...++.+.... . ...-+.++++ ..++++++
T Consensus 94 ~l~~e~k~i~l~~~~ns~~i~d~~~~~-----------~~~~i~~~er~~l-~-------~~~~~g~s~~--~~~i~~gs 152 (967)
T KOG0974|consen 94 KLFEENKKIALVTSRNSLLIRDSKNSS-----------VLSKIQSDERCTL-Y-------SSLIIGDSAE--ELYIASGS 152 (967)
T ss_pred chhhhcceEEEEEcCceEEEEecccCc-----------eehhcCCCceEEE-E-------eEEEEeccCc--EEEEEecc
Confidence 445567889999999999999987542 1222222111000 0 0011223332 23555666
Q ss_pred CCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceecc
Q psy12356 90 NDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVP 165 (400)
Q Consensus 90 ~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (400)
-=+.|.+|+....+ +.+|.+.|-++.|+-+| .++++.|+|+++|+|++.+++...
T Consensus 153 v~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg-~~i~s~SdDRsiRlW~i~s~~~~~-------------------- 211 (967)
T KOG0974|consen 153 VFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDG-RYIASVSDDRSIRLWPIDSREVLG-------------------- 211 (967)
T ss_pred ccccEEEEeccccCCcceecccCCceEEEEEccCC-cEEEEEecCcceeeeecccccccC--------------------
Confidence 77899999986322 45678889999999975 799999999999999999883110
Q ss_pred CchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-ecC
Q psy12356 166 ESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-RDY 244 (400)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D 244 (400)
+. -| +|+..|..+.|+|+ .|++ +.|
T Consensus 212 -----------------------------------~~----~f-------------gHsaRvw~~~~~~n--~i~t~ged 237 (967)
T KOG0974|consen 212 -----------------------------------CT----GF-------------GHSARVWACCFLPN--RIITVGED 237 (967)
T ss_pred -----------------------------------cc----cc-------------cccceeEEEEeccc--eeEEeccc
Confidence 00 01 68899999999999 6665 679
Q ss_pred CeEEEEeCCCCCCceeeecCC
Q psy12356 245 LCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 245 ~tIklWD~~~~~~~l~~~~~h 265 (400)
.|.++|+... ..|..|.+|
T Consensus 238 ctcrvW~~~~--~~l~~y~~h 256 (967)
T KOG0974|consen 238 CTCRVWGVNG--TQLEVYDEH 256 (967)
T ss_pred eEEEEEeccc--ceehhhhhh
Confidence 9999997663 235556555
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.8e-07 Score=88.24 Aligned_cols=163 Identities=20% Similarity=0.301 Sum_probs=114.1
Q ss_pred EEECC-CCCeEEEecCC--CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 9 SQRFS-DGELLATGDKG--GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 9 v~fsp-dG~~Las~s~D--g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|.=.| +-..+|+|+.. ..++|||++..+ +.|++-+...+++ .+...-+++++.|.|..+..++
T Consensus 154 ~r~~~~~p~Iva~GGke~~n~lkiwdle~~~-------------qiw~aKNvpnD~L-~LrVPvW~tdi~Fl~g~~~~~f 219 (412)
T KOG3881|consen 154 VRQTDTDPYIVATGGKENINELKIWDLEQSK-------------QIWSAKNVPNDRL-GLRVPVWITDIRFLEGSPNYKF 219 (412)
T ss_pred eccCCCCCceEecCchhcccceeeeecccce-------------eeeeccCCCCccc-cceeeeeeccceecCCCCCceE
Confidence 33444 34567779988 889999998532 2344333222222 1122235778999987555588
Q ss_pred EEeeCCCeEEEEEccCCCc-----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 86 LLSTNDQSFNIVDIKPTNM-----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~-----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++..-+.+|+||.+.+.- .-....++++..-|++ +.+.+|-.-+.+..+|+|++++.. |
T Consensus 220 at~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~g-n~Iy~gn~~g~l~~FD~r~~kl~g----~---------- 284 (412)
T KOG3881|consen 220 ATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSG-NFIYTGNTKGQLAKFDLRGGKLLG----C---------- 284 (412)
T ss_pred EEEecceeEEEecCcccCcceeEeccccCcceeeeecCCC-cEEEEecccchhheecccCceeec----c----------
Confidence 8888899999999987652 1224578899999974 788888888999999998884321 0
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
.+.+-+++|++|-.+|.+++||
T Consensus 285 ----------------------------------------------------------~~kg~tGsirsih~hp~~~~la 306 (412)
T KOG3881|consen 285 ----------------------------------------------------------GLKGITGSIRSIHCHPTHPVLA 306 (412)
T ss_pred ----------------------------------------------------------ccCCccCCcceEEEcCCCceEE
Confidence 0113357899999999999999
Q ss_pred Eec-CCeEEEEeCCCCCCce
Q psy12356 241 SRD-YLCVKVWDLHMESRPV 259 (400)
Q Consensus 241 s~~-D~tIklWD~~~~~~~l 259 (400)
+++ |+-+||+|+++. .+|
T Consensus 307 s~GLDRyvRIhD~ktr-kll 325 (412)
T KOG3881|consen 307 SCGLDRYVRIHDIKTR-KLL 325 (412)
T ss_pred eeccceeEEEeecccc-hhh
Confidence 865 999999999984 344
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.8e-07 Score=95.03 Aligned_cols=122 Identities=15% Similarity=0.142 Sum_probs=84.8
Q ss_pred eeeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 3 VYMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 3 ~~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+-+++++|.| +-+..+.|+.+|.|.-=+..+.+... ...++....+.. +.+.|.++.++|.+.
T Consensus 347 ~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~---~~~~~~~~~~~~------------h~g~v~~v~~nPF~~ 411 (555)
T KOG1587|consen 347 AVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAP---EVSYKGHSTFIT------------HIGPVYAVSRNPFYP 411 (555)
T ss_pred ccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccc---cccccccccccc------------cCcceEeeecCCCcc
Confidence 34578999988 67788889999999874443321100 001111112222 336799999999986
Q ss_pred CceEEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+++++.|-++|||...... .......|++++|||.....|+++..||.|.+||+...
T Consensus 412 --k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~ 474 (555)
T KOG1587|consen 412 --KNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD 474 (555)
T ss_pred --ceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc
Confidence 55555559999999876222 12334569999999998889999999999999999876
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.3e-07 Score=87.75 Aligned_cols=166 Identities=13% Similarity=0.177 Sum_probs=110.0
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
-+.+..+.++|+|++||.+..+....++++.+..+ ..+++..+..-. .-+++.|-.+...
T Consensus 62 ~~a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~-------~~kl~~~~~v~~-------------~~~ai~~~~~~~s 121 (390)
T KOG3914|consen 62 SLAPALVLTSDSGRLVAVATSSKQRAVFDYRENPK-------GAKLLDVSCVPK-------------RPTAISFIREDTS 121 (390)
T ss_pred hccccccccCCCceEEEEEeCCCceEEEEEecCCC-------cceeeeEeeccc-------------Ccceeeeeeccce
Confidence 46778889999999999999888888888765321 112232222211 1344555544321
Q ss_pred ceEEE-eeCCCeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 83 AHFLL-STNDQSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 83 ~~~l~-ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
..++- ++....+.+|....+.. -+|-+.+..|+++||+ +.++++..|+.||+=..-..-
T Consensus 122 v~v~dkagD~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~-~~IitaDRDEkIRvs~ypa~f---------------- 184 (390)
T KOG3914|consen 122 VLVADKAGDVYSFDILSADSGRCEPILGHVSMLLDVAVSPDD-QFIITADRDEKIRVSRYPATF---------------- 184 (390)
T ss_pred EEEEeecCCceeeeeecccccCcchhhhhhhhhheeeecCCC-CEEEEecCCceEEEEecCccc----------------
Confidence 12222 45677888888776553 3456678999999986 899999999998875432220
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
++ .++.-||...|..++.-++-.+
T Consensus 185 -----------------------------------~I---------------------esfclGH~eFVS~isl~~~~~L 208 (390)
T KOG3914|consen 185 -----------------------------------VI---------------------ESFCLGHKEFVSTISLTDNYLL 208 (390)
T ss_pred -----------------------------------ch---------------------hhhccccHhheeeeeeccCcee
Confidence 00 0112378888999998777554
Q ss_pred EEEecCCeEEEEeCCCCCCceeee
Q psy12356 239 MISRDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 239 las~~D~tIklWD~~~~~~~l~~~ 262 (400)
+.+++|+++++||++++. +|.+|
T Consensus 209 lS~sGD~tlr~Wd~~sgk-~L~t~ 231 (390)
T KOG3914|consen 209 LSGSGDKTLRLWDITSGK-LLDTC 231 (390)
T ss_pred eecCCCCcEEEEecccCC-ccccc
Confidence 445789999999999975 56666
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.75 E-value=7e-06 Score=90.73 Aligned_cols=284 Identities=12% Similarity=0.090 Sum_probs=148.9
Q ss_pred EEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcch--hhcccccccceeeEEEEEeccCCc
Q psy12356 7 EASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEF--DYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 7 ~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~--~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|+++++ |++.++-+.++.|++||.+... +..+.+-.... +-....+.-.....|++.++++
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~------------i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn-- 636 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNF------------IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKN-- 636 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCE------------EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCC--
Confidence 46889875 6677777788999999986421 11121100000 0000000012256788887653
Q ss_pred eEEEe-eCCCeEEEEEccCCCcccc--------------------cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 84 HFLLS-TNDQSFNIVDIKPTNMEEL--------------------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 84 ~~l~s-s~D~tI~lWd~~~~~~~~~--------------------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
.+.++ .....|+.+|+.++..... -..-+.++|+|+++.++++.+.++.|++||..++.
T Consensus 637 ~LYVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~ 716 (1057)
T PLN02919 637 LLYVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGV 716 (1057)
T ss_pred EEEEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCe
Confidence 45554 4567899999876542111 00125799999666788888889999999988763
Q ss_pred ccccc-cceeccCcccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeeccccccc-----C----cccccccCC
Q psy12356 143 LCDRH-SKCLIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALC-----D----RHSKFFEEP 211 (400)
Q Consensus 143 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~-----~----~~~~~~~~~ 211 (400)
...-. ........+.......+ ....++...+++. ...+.+.++.|++||+.++... + .....|...
T Consensus 717 v~~~~G~G~~~~~~g~~~~~~~~--~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~ 794 (1057)
T PLN02919 717 TRVFSGDGYERNLNGSSGTSTSF--AQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDH 794 (1057)
T ss_pred EEEEecCCccccCCCCccccccc--cCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCC
Confidence 21000 00000000000000000 0011222334442 4455567899999998764310 0 000000000
Q ss_pred CCCCCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCccccc
Q psy12356 212 EDPTNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPI 290 (400)
Q Consensus 212 ~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~ 290 (400)
.. ... ...-..-..++|+|+|++.++ +.++.|++||..++. +.++-+. |. .
T Consensus 795 dG--~g~--~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~--v~tiaG~-----G~------~----------- 846 (1057)
T PLN02919 795 DG--VGS--EVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKR--VTTLAGT-----GK------A----------- 846 (1057)
T ss_pred CC--chh--hhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCe--EEEEecc-----CC------c-----------
Confidence 00 000 000112358999999998776 568999999998642 3333211 00 0
Q ss_pred ceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 291 ELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
+ .+||... .++-.....|+++|||+.+++- .+++|++||+++.+
T Consensus 847 --------------G----------~~dG~~~---------~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 847 --------------G----------FKDGKAL---------KAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGE 891 (1057)
T ss_pred --------------C----------CCCCccc---------ccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 0 0011000 1223345679999999988885 68999999998654
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-07 Score=89.78 Aligned_cols=156 Identities=13% Similarity=0.152 Sum_probs=104.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC-
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ- 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~- 82 (400)
++|.++.|||||++||+.+.| ..+||+++++-. ++.......+ .-...++|+.|..+
T Consensus 187 ~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~-----------~a~~t~~~k~----------~~~~~cRF~~d~~~~ 244 (398)
T KOG0771|consen 187 AEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAA-----------LARKTPFSKD----------EMFSSCRFSVDNAQE 244 (398)
T ss_pred CccccceeCCCCcEEEEecCC-ceEEEEeccCch-----------hhhcCCcccc----------hhhhhceecccCCCc
Confidence 578999999999999999999 999999987521 1111111111 22456788776532
Q ss_pred ceEEEe--eCCCeEEEEEccCCC----cc-----cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccccee
Q psy12356 83 AHFLLS--TNDQSFNIVDIKPTN----ME-----ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCL 151 (400)
Q Consensus 83 ~~~l~s--s~D~tI~lWd~~~~~----~~-----~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~ 151 (400)
..++++ ..-+.|++||+..-. ++ .....|++++.+++| +++|-|+.||.|-|.++.+-+. +
T Consensus 245 ~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dG-kf~AlGT~dGsVai~~~~~lq~-------~ 316 (398)
T KOG0771|consen 245 TLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDG-KFLALGTMDGSVAIYDAKSLQR-------L 316 (398)
T ss_pred eEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCC-cEEEEeccCCcEEEEEeceeee-------e
Confidence 233333 345667777763211 11 112468999999985 7889999999999988765411 0
Q ss_pred ccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEE
Q psy12356 152 IEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVK 231 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 231 (400)
+. . -..|...|+.|.
T Consensus 317 ------------------------------------------------------~~--v---------k~aH~~~VT~lt 331 (398)
T KOG0771|consen 317 ------------------------------------------------------QY--V---------KEAHLGFVTGLT 331 (398)
T ss_pred ------------------------------------------------------Ee--e---------hhhheeeeeeEE
Confidence 00 0 015777899999
Q ss_pred ECCCCcEEEE-ecCCeEEEEeCCC
Q psy12356 232 ISNSGRYMIS-RDYLCVKVWDLHM 254 (400)
Q Consensus 232 fSpdg~~las-~~D~tIklWD~~~ 254 (400)
|+||.+++++ +.|.++.|--+.-
T Consensus 332 F~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 332 FSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EcCCcCcccccccCCceeEEEEee
Confidence 9999999997 5678888876653
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=7e-07 Score=82.61 Aligned_cols=97 Identities=15% Similarity=0.178 Sum_probs=66.7
Q ss_pred EEEEEECCCCCeEEEe-cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGELLATG-DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~~Las~-s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
|.-+.|+.|.-++.++ ..|+.|++|++.-.+ -...++.-. .++.+++|||||. +
T Consensus 51 i~yieW~ads~~ilC~~yk~~~vqvwsl~Qpe-----------w~ckIdeg~------------agls~~~WSPdgr--h 105 (447)
T KOG4497|consen 51 IVYIEWKADSCHILCVAYKDPKVQVWSLVQPE-----------WYCKIDEGQ------------AGLSSISWSPDGR--H 105 (447)
T ss_pred hhheeeeccceeeeeeeeccceEEEEEeecce-----------eEEEeccCC------------CcceeeeECCCcc--e
Confidence 4456788898877754 678899999987321 122333222 3477899999985 6
Q ss_pred EEE-eeCCCeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEe
Q psy12356 85 FLL-STNDQSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSS 128 (400)
Q Consensus 85 ~l~-ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s 128 (400)
++. +..|-.|.+|.+.+... +.....+-.++|+|+| ++.+-++
T Consensus 106 iL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg-~f~ai~s 152 (447)
T KOG4497|consen 106 ILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDG-QFCAILS 152 (447)
T ss_pred EeeeecceeEEEEEEeccceeEEecccccCceeEEECCCC-ceeeeee
Confidence 665 56799999999987663 3334557889999986 5544443
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-05 Score=79.10 Aligned_cols=191 Identities=12% Similarity=0.129 Sum_probs=99.7
Q ss_pred EEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEE
Q psy12356 18 LATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIV 97 (400)
Q Consensus 18 Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lW 97 (400)
+++-..+++|.|.|..+. ++++++....+ .-..+.|+||+. .+.+++.|+.|.++
T Consensus 9 ~V~~~~~~~v~viD~~t~-----------~~~~~i~~~~~------------~h~~~~~s~Dgr--~~yv~~rdg~vsvi 63 (369)
T PF02239_consen 9 YVVERGSGSVAVIDGATN-----------KVVARIPTGGA------------PHAGLKFSPDGR--YLYVANRDGTVSVI 63 (369)
T ss_dssp EEEEGGGTEEEEEETTT------------SEEEEEE-STT------------EEEEEE-TT-SS--EEEEEETTSEEEEE
T ss_pred EEEecCCCEEEEEECCCC-----------eEEEEEcCCCC------------ceeEEEecCCCC--EEEEEcCCCeEEEE
Confidence 345567899999998753 34556653321 012467888874 55567889999999
Q ss_pred EccCCCc-ccc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhc
Q psy12356 98 DIKPTNM-EEL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQS 174 (400)
Q Consensus 98 d~~~~~~-~~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (400)
|+.+++. +.. ...-.+++++|+|..++++...++++.++|.++.+.++.....-.... ..++...++..
T Consensus 64 D~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~--------~~~~Rv~aIv~ 135 (369)
T PF02239_consen 64 DLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVD--------GPESRVAAIVA 135 (369)
T ss_dssp ETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TT--------TS---EEEEEE
T ss_pred ECCcccEEEEEecCCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeeccccccccc--------ccCCCceeEEe
Confidence 9998873 222 234578999998754445556699999999988754321100000000 00000011222
Q ss_pred ccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-e-cCCeEEEEe
Q psy12356 175 SQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-R-DYLCVKVWD 251 (400)
Q Consensus 175 ~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~-~D~tIklWD 251 (400)
++... ...+--+.+.|-+-|........ .+.+ ..........|+|+|++++. . .++.|-++|
T Consensus 136 s~~~~~fVv~lkd~~~I~vVdy~d~~~~~--~~~i-------------~~g~~~~D~~~dpdgry~~va~~~sn~i~viD 200 (369)
T PF02239_consen 136 SPGRPEFVVNLKDTGEIWVVDYSDPKNLK--VTTI-------------KVGRFPHDGGFDPDGRYFLVAANGSNKIAVID 200 (369)
T ss_dssp -SSSSEEEEEETTTTEEEEEETTTSSCEE--EEEE-------------E--TTEEEEEE-TTSSEEEEEEGGGTEEEEEE
T ss_pred cCCCCEEEEEEccCCeEEEEEeccccccc--eeee-------------cccccccccccCcccceeeecccccceeEEEe
Confidence 23333 22222233555555554321100 0000 11234567899999998754 3 467899999
Q ss_pred CCCCC
Q psy12356 252 LHMES 256 (400)
Q Consensus 252 ~~~~~ 256 (400)
.+++.
T Consensus 201 ~~~~k 205 (369)
T PF02239_consen 201 TKTGK 205 (369)
T ss_dssp TTTTE
T ss_pred eccce
Confidence 88753
|
... |
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.1e-07 Score=85.70 Aligned_cols=114 Identities=11% Similarity=0.263 Sum_probs=89.9
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|+.|.|+|-+++|++|+.|.--+||...++ +.+++.-.+..|+ ..+++|.|+|.++
T Consensus 56 ~~vtgvdWap~snrIvtcs~drnayVw~~~~~--------~~WkptlvLlRiN------------rAAt~V~WsP~en-- 113 (361)
T KOG1523|consen 56 KIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSG--------GTWKPTLVLLRIN------------RAATCVKWSPKEN-- 113 (361)
T ss_pred cceeEEeecCCCCceeEccCCCCccccccCCC--------CeeccceeEEEec------------cceeeEeecCcCc--
Confidence 46899999999999999999999999998543 2333333344444 3488999999875
Q ss_pred eEEEeeCCCeEEEEEccCCC-------c-ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------M-EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------~-~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
+|+++|.-..|-||-.+..+ + +.+.+.|++++|||++ -++|.||.|+..|++...=
T Consensus 114 kFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnn-VLlaaGs~D~k~rVfSayI 177 (361)
T KOG1523|consen 114 KFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNN-VLLAAGSTDGKCRVFSAYI 177 (361)
T ss_pred eEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCc-ceecccccCcceeEEEEee
Confidence 89999999999999887654 1 3456789999999974 7889999999999987543
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.7e-06 Score=83.11 Aligned_cols=69 Identities=19% Similarity=0.248 Sum_probs=44.7
Q ss_pred eeEEEEEeccCCceEEEeeC---CCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCC--eEEEEecccc
Q psy12356 71 INKIRWLRRKNQAHFLLSTN---DQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKG--TIRLCDMRAA 141 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~---D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg--~i~lWD~~~~ 141 (400)
+...+|+|+++ .++.++. ...|++||+.++... .+...+.+++|+|++..++++.+.++ .|.+||+.++
T Consensus 192 ~~~p~~Spdg~--~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~ 268 (417)
T TIGR02800 192 ILSPAWSPDGQ--KLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGK 268 (417)
T ss_pred eecccCCCCCC--EEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCC
Confidence 66788999874 5555432 358999999887632 23345667899998644444444444 4666666554
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.6e-06 Score=81.16 Aligned_cols=193 Identities=11% Similarity=0.097 Sum_probs=119.6
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
+..++|++.=.-+|++..|-+|+||+-.... -..++.-.. .-|++++|-|.+. ..+
T Consensus 101 lr~~aWhqH~~~fava~nddvVriy~ksst~------------pt~Lks~sQ-----------rnvtclawRPlsa-sel 156 (445)
T KOG2139|consen 101 LRGVAWHQHIIAFAVATNDDVVRIYDKSSTC------------PTKLKSVSQ-----------RNVTCLAWRPLSA-SEL 156 (445)
T ss_pred eeeEeechhhhhhhhhccCcEEEEeccCCCC------------Cceecchhh-----------cceeEEEeccCCc-cee
Confidence 5678899877778899999999999965421 112222111 2389999999874 355
Q ss_pred EEeeCCCeEEEEEccCCC-c-------ccc---------cccEEEEEEecCCCCEEEEEeC-CCeEEEEecccccccccc
Q psy12356 86 LLSTNDQSFNIVDIKPTN-M-------EEL---------NEVITAAEFHPIDCNLFVYSSS-KGTIRLCDMRAAALCDRH 147 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~-~-------~~~---------~~~V~sv~f~p~~~~~las~s~-Dg~i~lWD~~~~~~~~~~ 147 (400)
++++. +-|-||..+... + ..+ ...|++++|++|+ ..++++|. |..|+|||+.++.-.+
T Consensus 157 avgCr-~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dg-t~l~tAS~gsssi~iWdpdtg~~~p-- 232 (445)
T KOG2139|consen 157 AVGCR-AGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDG-TILVTASFGSSSIMIWDPDTGQKIP-- 232 (445)
T ss_pred eeeec-ceeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCC-CEEeecccCcceEEEEcCCCCCccc--
Confidence 55554 557899765321 0 111 1369999999985 67888887 7899999999984211
Q ss_pred cceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 148 SKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
+.-.....+..+ ..+|++.....++-|+..++|...+...+.+ . + --.+.|
T Consensus 233 ---L~~~glgg~slL----------kwSPdgd~lfaAt~davfrlw~e~q~wt~er---w------------~-lgsgrv 283 (445)
T KOG2139|consen 233 ---LIPKGLGGFSLL----------KWSPDGDVLFAATCDAVFRLWQENQSWTKER---W------------I-LGSGRV 283 (445)
T ss_pred ---ccccCCCceeeE----------EEcCCCCEEEEecccceeeeehhcccceecc---e------------e-ccCCce
Confidence 100000011111 2346665544556799999997654332211 0 0 112589
Q ss_pred EEEEECCCCcEEEEecCCeEEEEeCCCC
Q psy12356 228 SDVKISNSGRYMISRDYLCVKVWDLHME 255 (400)
Q Consensus 228 ~~v~fSpdg~~las~~D~tIklWD~~~~ 255 (400)
....|+|+|++|+=+..+.-+|+.+.-.
T Consensus 284 qtacWspcGsfLLf~~sgsp~lysl~f~ 311 (445)
T KOG2139|consen 284 QTACWSPCGSFLLFACSGSPRLYSLTFD 311 (445)
T ss_pred eeeeecCCCCEEEEEEcCCceEEEEeec
Confidence 9999999999887443445556655543
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=0.00011 Score=69.18 Aligned_cols=263 Identities=14% Similarity=0.178 Sum_probs=145.9
Q ss_pred eeEEEEEECCCCCeEEEecC---CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 4 YMREASQRFSDGELLATGDK---GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~---Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
.-++-++|+|++++|-++-. +|.|--|.++... |.+. +-.+... .....+.|+.++++
T Consensus 40 ~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~-------G~Lt----~ln~~~~--------~g~~p~yvsvd~~g 100 (346)
T COG2706 40 GNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDD-------GRLT----FLNRQTL--------PGSPPCYVSVDEDG 100 (346)
T ss_pred CCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCC-------CeEE----Eeecccc--------CCCCCeEEEECCCC
Confidence 34567899999998888754 5788888887421 2222 2222110 00113678888776
Q ss_pred CCceEEEee-CCCeEEEEEccC-CCcc------ccccc----------EEEEEEecCCCCEEEEEeC-CCeEEEEecccc
Q psy12356 81 NQAHFLLST-NDQSFNIVDIKP-TNME------ELNEV----------ITAAEFHPIDCNLFVYSSS-KGTIRLCDMRAA 141 (400)
Q Consensus 81 ~~~~~l~ss-~D~tI~lWd~~~-~~~~------~~~~~----------V~sv~f~p~~~~~las~s~-Dg~i~lWD~~~~ 141 (400)
+ .++++. .-+.|.+.-++. |.+. .|.+. +-...|.|++ +++++... --.|.++|+..+
T Consensus 101 ~--~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~-~~l~v~DLG~Dri~~y~~~dg 177 (346)
T COG2706 101 R--FVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDG-RYLVVPDLGTDRIFLYDLDDG 177 (346)
T ss_pred C--EEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCC-CEEEEeecCCceEEEEEcccC
Confidence 3 344444 368999998854 5432 12222 6778899985 66666643 124777887766
Q ss_pred cccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 142 ALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
.+...-. + .+..
T Consensus 178 ~L~~~~~-------------------------------~-------------~v~~------------------------ 189 (346)
T COG2706 178 KLTPADP-------------------------------A-------------EVKP------------------------ 189 (346)
T ss_pred ccccccc-------------------------------c-------------ccCC------------------------
Confidence 3311000 0 0000
Q ss_pred ccccCeEEEEECCCCcEEEE-ec-CCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCcc
Q psy12356 222 EIISSISDVKISNSGRYMIS-RD-YLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPR 299 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~~las-~~-D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~ 299 (400)
...-..|+|+|+|+++.. .+ +++|-+|........+..++.+..+|+. +-....-..|++ .++ .+
T Consensus 190 --G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~d-F~g~~~~aaIhi---s~d-------Gr 256 (346)
T COG2706 190 --GAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPED-FTGTNWAAAIHI---SPD-------GR 256 (346)
T ss_pred --CCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccc-cCCCCceeEEEE---CCC-------CC
Confidence 123357999999998764 33 7999999999753345555444434321 100000111111 111 11
Q ss_pred ceec--cccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe--cCCeEEEEeCccCCeeEEEE
Q psy12356 300 RIFA--NAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA--DDLRINLWHLEITDQSFNIV 373 (400)
Q Consensus 300 ~~~~--~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~--~D~~i~lW~~~~~~~~~~~~ 373 (400)
-+++ .+|+ .|....++|+|..|...... .-|........|+|+|++|+.+ +..+|.++..+...+++..+
T Consensus 257 FLYasNRg~d-sI~~f~V~~~~g~L~~~~~~---~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~ 330 (346)
T COG2706 257 FLYASNRGHD-SIAVFSVDPDGGKLELVGIT---PTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLL 330 (346)
T ss_pred EEEEecCCCC-eEEEEEEcCCCCEEEEEEEe---ccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEec
Confidence 1121 2344 47777788887665432211 1123334578899999999987 34569999987665555433
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.1e-05 Score=89.22 Aligned_cols=233 Identities=9% Similarity=0.061 Sum_probs=125.2
Q ss_pred EEEEEECCCCCeEEEecC-CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcch-hh----cccccccceeeEEEEEec
Q psy12356 6 REASQRFSDGELLATGDK-GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEF-DY----LKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~-~~----~~~~~~~~~V~~v~~sp~ 79 (400)
...|+|+++|+.|..+.. ++.|+++|..++. +.++.+-.... ++ ......-.....|+++|+
T Consensus 626 P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~------------V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~ 693 (1057)
T PLN02919 626 PQGLAYNAKKNLLYVADTENHALREIDFVNET------------VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPV 693 (1057)
T ss_pred CcEEEEeCCCCEEEEEeCCCceEEEEecCCCE------------EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecC
Confidence 567899999886665554 5789999986531 22332210000 00 000000012457899985
Q ss_pred cCCceEEEeeCCCeEEEEEccCCCccc---------c---------cccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 80 KNQAHFLLSTNDQSFNIVDIKPTNMEE---------L---------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 80 ~~~~~~l~ss~D~tI~lWd~~~~~~~~---------~---------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+. ..+++.+.++.|++||..++.... . -...++++|+|++..++++-+.++.|++||+.++
T Consensus 694 ~g-~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg 772 (1057)
T PLN02919 694 NE-KVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTG 772 (1057)
T ss_pred CC-eEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCC
Confidence 32 244555678999999987654210 0 0123579999987667788888999999999876
Q ss_pred ccccccc------ceeccCccc-c-eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCC
Q psy12356 142 ALCDRHS------KCLIEGTNC-N-CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPED 213 (400)
Q Consensus 142 ~~~~~~~------~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~ 213 (400)
....... ......... . .....+ ....++...+++....+...++.|++||..++.... ....- .+..
T Consensus 773 ~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l--~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~t-iaG~G-~~G~ 848 (1057)
T PLN02919 773 GSRLLAGGDPTFSDNLFKFGDHDGVGSEVLL--QHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTT-LAGTG-KAGF 848 (1057)
T ss_pred cEEEEEecccccCcccccccCCCCchhhhhc--cCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEE-EeccC-CcCC
Confidence 3210000 000000000 0 000000 001122223455555556678999999987654310 00000 0000
Q ss_pred CCCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCC
Q psy12356 214 PTNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMES 256 (400)
Q Consensus 214 ~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~ 256 (400)
.. .....+.......|+++|+|+++++ +.+++|++||+.++.
T Consensus 849 ~d-G~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 849 KD-GKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGE 891 (1057)
T ss_pred CC-CcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 00 0001122245678999999998776 568999999999864
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=1e-05 Score=81.75 Aligned_cols=70 Identities=17% Similarity=0.225 Sum_probs=43.3
Q ss_pred eeeEEEEEeccCCceEEEeeC-C--CeEEEEEccCCCccc---ccccEEEEEEecCCCCEEEEEeCCCe--EEEEecccc
Q psy12356 70 KINKIRWLRRKNQAHFLLSTN-D--QSFNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYSSSKGT--IRLCDMRAA 141 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss~-D--~tI~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~s~Dg~--i~lWD~~~~ 141 (400)
.+.+.+|+||++ +++..+. + ..|.+||+.+++.+. ......+.+|+|++..++++.+.++. |.++|+.++
T Consensus 219 ~~~~p~wSPDG~--~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg 296 (448)
T PRK04792 219 PLMSPAWSPDGR--KLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATK 296 (448)
T ss_pred cccCceECCCCC--EEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCC
Confidence 366789999985 5655432 3 368888998876322 22334578999987544444555664 555555544
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.9e-05 Score=76.24 Aligned_cols=56 Identities=14% Similarity=0.220 Sum_probs=33.7
Q ss_pred eEEEEEeccCCceEE-EeeC--CCeEEEEEccCCCccc---ccccEEEEEEecCCCCEEEEEe
Q psy12356 72 NKIRWLRRKNQAHFL-LSTN--DQSFNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYSS 128 (400)
Q Consensus 72 ~~v~~sp~~~~~~~l-~ss~--D~tI~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~s 128 (400)
.+=+|+||+....++ ++-. ...|.+.++.+++.+. ..+.....+|+||| +.||..+
T Consensus 188 ~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG-~~Laf~s 249 (428)
T PRK01029 188 ITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRK-KLLAFIS 249 (428)
T ss_pred ccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCC-CEEEEEE
Confidence 345899998522243 3322 3467777888776322 23344567999986 4566554
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.2e-05 Score=80.54 Aligned_cols=190 Identities=12% Similarity=0.025 Sum_probs=99.7
Q ss_pred EEEEECCCCCeEE---EecCCCe--EEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 7 EASQRFSDGELLA---TGDKGGR--VVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 7 ~~v~fspdG~~La---s~s~Dg~--I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+=+|||||+.++ +...+|. |.+.++.+++ .+.+..+.++ ....+|+||+.
T Consensus 188 ~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~---------~~~lt~~~g~---------------~~~p~wSPDG~ 243 (428)
T PRK01029 188 ITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPA---------GKKILALQGN---------------QLMPTFSPRKK 243 (428)
T ss_pred ccceEccCCCceEEEEEEccCCCceEEEEECCCCC---------ceEeecCCCC---------------ccceEECCCCC
Confidence 4558999998633 4444544 6666776542 2223333333 23468999985
Q ss_pred CceEEEee-C----CCeEEEEEccCC---Ccccc----cccEEEEEEecCCCCEEEEEe-CCCeEEEEeccc---ccccc
Q psy12356 82 QAHFLLST-N----DQSFNIVDIKPT---NMEEL----NEVITAAEFHPIDCNLFVYSS-SKGTIRLCDMRA---AALCD 145 (400)
Q Consensus 82 ~~~~l~ss-~----D~tI~lWd~~~~---~~~~~----~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~~~---~~~~~ 145 (400)
+++..+ . |-.+.+|++..+ ..+.+ .......+|+||| +.|+..+ .+|..+||.+.- +....
T Consensus 244 --~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG-~~Laf~s~~~g~~~ly~~~~~~~g~~~~ 320 (428)
T PRK01029 244 --LLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDG-TRLVFVSNKDGRPRIYIMQIDPEGQSPR 320 (428)
T ss_pred --EEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCC-CEEEEEECCCCCceEEEEECcccccceE
Confidence 566543 2 334455777653 22111 1234678999986 5566655 477667776432 11000
Q ss_pred cccceeccCcccceeceeccCchhhhhhcccCccee-ecCC--CCCeEEEeecccccccCcccccccCCCCCCCcccccc
Q psy12356 146 RHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREK-EDNR--RKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222 (400)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
.+... ...... ...+|++... .... ....|.+||+.++... .+ ..
T Consensus 321 ----~lt~~-~~~~~~----------p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-----~L------------t~ 368 (428)
T PRK01029 321 ----LLTKK-YRNSSC----------PAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-----QL------------TT 368 (428)
T ss_pred ----EeccC-CCCccc----------eeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-----Ec------------cC
Confidence 00000 000001 1223555322 1111 2347889998765421 11 01
Q ss_pred cccCeEEEEECCCCcEEE-Eec---CCeEEEEeCCCC
Q psy12356 223 IISSISDVKISNSGRYMI-SRD---YLCVKVWDLHME 255 (400)
Q Consensus 223 h~~~V~~v~fSpdg~~la-s~~---D~tIklWD~~~~ 255 (400)
....+....|+|||+.|+ ++. ...|.+||+..+
T Consensus 369 ~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g 405 (428)
T PRK01029 369 SPENKESPSWAIDSLHLVYSAGNSNESELYLISLITK 405 (428)
T ss_pred CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 112456789999999887 332 467888898765
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.40 E-value=7.2e-05 Score=73.47 Aligned_cols=195 Identities=16% Similarity=0.226 Sum_probs=103.5
Q ss_pred eEEE-eeCCCeEEEEEccCCCc-c---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLL-STNDQSFNIVDIKPTNM-E---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~-ss~D~tI~lWd~~~~~~-~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++ -..+++|.+.|.++.+. . .....-..+.|+||+ +++..++.||.|.++|+.+.+.+.+
T Consensus 7 l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dg-r~~yv~~rdg~vsviD~~~~~~v~~------------ 73 (369)
T PF02239_consen 7 LFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDG-RYLYVANRDGTVSVIDLATGKVVAT------------ 73 (369)
T ss_dssp EEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-S-SEEEEEETTSEEEEEETTSSSEEEE------------
T ss_pred EEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCC-CEEEEEcCCCeEEEEECCcccEEEE------------
Confidence 4444 45789999999988763 1 122233567899986 5666667899999999998832210
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
| +.+ ..-..+++||||++
T Consensus 74 -------------------------------i-----~~G--------------------------~~~~~i~~s~DG~~ 91 (369)
T PF02239_consen 74 -------------------------------I-----KVG--------------------------GNPRGIAVSPDGKY 91 (369)
T ss_dssp -------------------------------E-----E-S--------------------------SEEEEEEE--TTTE
T ss_pred -------------------------------E-----ecC--------------------------CCcceEEEcCCCCE
Confidence 0 000 12457999999999
Q ss_pred EEEe--cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccc--eeccccccceEEEE
Q psy12356 239 MISR--DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRR--IFANAHTYHINSIS 314 (400)
Q Consensus 239 las~--~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~--~~~~~~~~~i~~i~ 314 (400)
++.+ ..+++.++|.++. ++++++.......+++ .+....| ..+..+. ++..-..+.|+-+.
T Consensus 92 ~~v~n~~~~~v~v~D~~tl-e~v~~I~~~~~~~~~~---~~Rv~aI-----------v~s~~~~~fVv~lkd~~~I~vVd 156 (369)
T PF02239_consen 92 VYVANYEPGTVSVIDAETL-EPVKTIPTGGMPVDGP---ESRVAAI-----------VASPGRPEFVVNLKDTGEIWVVD 156 (369)
T ss_dssp EEEEEEETTEEEEEETTT---EEEEEE--EE-TTTS------EEEE-----------EE-SSSSEEEEEETTTTEEEEEE
T ss_pred EEEEecCCCceeEeccccc-cceeeccccccccccc---CCCceeE-----------EecCCCCEEEEEEccCCeEEEEE
Confidence 9865 4799999999985 4677765442211110 0111111 0000111 11111234566666
Q ss_pred EcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe--cCCeEEEEeCccCCeeEEEEee
Q psy12356 315 VNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA--DDLRINLWHLEITDQSFNIVDI 375 (400)
Q Consensus 315 ~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~--~D~~i~lW~~~~~~~~~~~~~~ 375 (400)
++....+.. .. ..-........|+|||++++.+ .++.|-++|.+..+ ....++.
T Consensus 157 y~d~~~~~~-~~-----i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k-~v~~i~~ 212 (369)
T PF02239_consen 157 YSDPKNLKV-TT-----IKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGK-LVALIDT 212 (369)
T ss_dssp TTTSSCEEE-EE-----EE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTE-EEEEEE-
T ss_pred eccccccce-ee-----ecccccccccccCcccceeeecccccceeEEEeeccce-EEEEeec
Confidence 653322211 00 0112334568999999987764 57789999987643 3344444
|
... |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.4e-05 Score=73.26 Aligned_cols=116 Identities=12% Similarity=0.214 Sum_probs=71.5
Q ss_pred EEEEEECCCCCeEEEecC-CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGELLATGDK-GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
..++.|+|||++|.++.. ...|++|+++... +.......++... ..+..++.|+|++. ..
T Consensus 146 ~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~-------~~l~~~~~~~~~~-----------G~GPRh~~f~pdg~-~~ 206 (345)
T PF10282_consen 146 PHQVVFSPDGRFVYVPDLGADRVYVYDIDDDT-------GKLTPVDSIKVPP-----------GSGPRHLAFSPDGK-YA 206 (345)
T ss_dssp EEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS--------TEEEEEEEECST-----------TSSEEEEEE-TTSS-EE
T ss_pred ceeEEECCCCCEEEEEecCCCEEEEEEEeCCC-------ceEEEeecccccc-----------CCCCcEEEEcCCcC-EE
Confidence 568999999998887643 4589999997542 1121112222111 13477899999873 12
Q ss_pred EEEeeCCCeEEEEEcc--CCCccc----------cc--ccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 85 FLLSTNDQSFNIVDIK--PTNMEE----------LN--EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~--~~~~~~----------~~--~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
+++.-.+++|.++++. ++.+.. .. ..-..++++|++..++++...+++|-++++..
T Consensus 207 Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~ 276 (345)
T PF10282_consen 207 YVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDP 276 (345)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECT
T ss_pred EEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEec
Confidence 3334568999999988 443211 11 14678999999766667666788999999843
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.8e-07 Score=90.79 Aligned_cols=112 Identities=13% Similarity=0.215 Sum_probs=85.0
Q ss_pred eEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeee-ccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 5 MREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 5 ~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.|+.+.|.| ....||+|+.|-.|..||+.... .+...+. -|++ -..|+|+.-.+
T Consensus 116 aitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~----------~p~ys~~~w~s~-------------asqVkwnyk~p- 171 (1081)
T KOG0309|consen 116 AITDINFNPQHPDVLATCSVDTYVHAWDMRSPH----------RPFYSTSSWRSA-------------ASQVKWNYKDP- 171 (1081)
T ss_pred ceeccccCCCCCcceeeccccccceeeeccCCC----------cceeeeeccccc-------------CceeeecccCc-
Confidence 577888987 45799999999999999998643 1122222 2332 34688987543
Q ss_pred ceEEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+++++..+.|++||++.|. ++++...|++++|+..-...+.+++.|++|+.||....
T Consensus 172 -~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS 234 (1081)
T KOG0309|consen 172 -NVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS 234 (1081)
T ss_pred -chhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence 78888888999999998876 35666788999998765567899999999999998765
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.9e-05 Score=72.22 Aligned_cols=116 Identities=15% Similarity=0.144 Sum_probs=82.0
Q ss_pred eEEEEEeccCCceEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc
Q psy12356 72 NKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD 145 (400)
Q Consensus 72 ~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~ 145 (400)
-++.|++-+. .++++-.+|.+-+-+.+... .+.|.-..+..+|+-.+.+++.+||.|+.+.-||+|-++
T Consensus 125 lslD~~~~~~--~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~--- 199 (339)
T KOG0280|consen 125 LSLDISTSGT--KIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK--- 199 (339)
T ss_pred eEEEeeccCc--eEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc---
Confidence 4677887663 56666667877755544332 345666788899988888899999999999999998541
Q ss_pred cccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc
Q psy12356 146 RHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS 225 (400)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 225 (400)
.+ +|- + ..-|..
T Consensus 200 ---~~-----------------------------------------i~~-----------------n-------~kvH~~ 211 (339)
T KOG0280|consen 200 ---TF-----------------------------------------IWH-----------------N-------SKVHTS 211 (339)
T ss_pred ---ce-----------------------------------------eee-----------------c-------ceeeec
Confidence 00 110 0 013567
Q ss_pred CeEEEEECC-CCcEEEEec-CCeEEEEeCCCCCCcee
Q psy12356 226 SISDVKISN-SGRYMISRD-YLCVKVWDLHMESRPVE 260 (400)
Q Consensus 226 ~V~~v~fSp-dg~~las~~-D~tIklWD~~~~~~~l~ 260 (400)
.|.+|.-|| ++.+|++++ |.+|++||.++=++||.
T Consensus 212 GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~ 248 (339)
T KOG0280|consen 212 GVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLF 248 (339)
T ss_pred ceEEEecCCCCCceEEEeccccceeeeehhcccCccc
Confidence 788888886 678898875 79999999996566764
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.2e-06 Score=56.26 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=29.2
Q ss_pred cccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 332 DAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 332 ~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
.+|+..|++|+|+|++++|||+ .|++|++||
T Consensus 8 ~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 8 RGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp ESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred cCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 5899999999999999999997 799999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.29 E-value=7.7e-05 Score=73.70 Aligned_cols=193 Identities=13% Similarity=0.206 Sum_probs=118.6
Q ss_pred eEEEEEECCCC--CeEEE-----ecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 5 MREASQRFSDG--ELLAT-----GDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 5 ~v~~v~fspdG--~~Las-----~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
.|+...+||.+ ..||+ .+.=+.||||.......+.. ...++|- ...+| ...|+
T Consensus 167 ~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~------~a~ksFF-------------kadkv-qm~WN 226 (566)
T KOG2315|consen 167 GITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQP------VANKSFF-------------KADKV-QMKWN 226 (566)
T ss_pred ceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccch------hhhcccc-------------cccee-EEEec
Confidence 46777888764 45554 35567899998764321100 0011221 11122 35688
Q ss_pred eccCCceEEEeeC-CC---------eEEEEEccCCCc--cc-ccccEEEEEEecCCCCEEE--EEeCCCeEEEEeccccc
Q psy12356 78 RRKNQAHFLLSTN-DQ---------SFNIVDIKPTNM--EE-LNEVITAAEFHPIDCNLFV--YSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 78 p~~~~~~~l~ss~-D~---------tI~lWd~~~~~~--~~-~~~~V~sv~f~p~~~~~la--s~s~Dg~i~lWD~~~~~ 142 (400)
+-++.-.+|+++. |+ ++.+.++++..+ .- -.++|.++.|+|++. .|+ +|-.=..+-++|++..-
T Consensus 227 ~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~-EF~VvyGfMPAkvtifnlr~~~ 305 (566)
T KOG2315|consen 227 KLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGR-EFAVVYGFMPAKVTIFNLRGKP 305 (566)
T ss_pred cCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCC-EEEEEEecccceEEEEcCCCCE
Confidence 7765323333432 44 788888873332 11 257899999999864 443 34446789999988662
Q ss_pred ccccccceeccCcccceeceeccCchhhhhhcccCcceee---cCCCCCeEEEeecccccccCcccccccCCCCCCCccc
Q psy12356 143 LCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKE---DNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSF 219 (400)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
+ ..+++++++.++++|.+..++ =|.-.|.|.+||+.+.++... +.
T Consensus 306 v------------------~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~----~~---------- 353 (566)
T KOG2315|consen 306 V------------------FDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAK----FK---------- 353 (566)
T ss_pred e------------------EeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccc----cc----------
Confidence 1 234566677777778775422 245678999999988665321 11
Q ss_pred ccccccCeEEEEECCCCcEEEEe--c-----CCeEEEEeCCC
Q psy12356 220 FSEIISSISDVKISNSGRYMISR--D-----YLCVKVWDLHM 254 (400)
Q Consensus 220 ~~~h~~~V~~v~fSpdg~~las~--~-----D~tIklWD~~~ 254 (400)
. ..-+-++|+|||++++++ . |+.+|||+...
T Consensus 354 --a--~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG 391 (566)
T KOG2315|consen 354 --A--ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTG 391 (566)
T ss_pred --c--CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecC
Confidence 0 123458999999998753 2 89999999984
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=98.29 E-value=8e-06 Score=74.69 Aligned_cols=115 Identities=16% Similarity=0.165 Sum_probs=85.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+-.++.|++.|.-++++..+|.+.+-+.+... .+-.+.+++|+.+ ..-..|+...+ +.
T Consensus 123 ~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~---------le~vq~wk~He~E------------~Wta~f~~~~p-nl 180 (339)
T KOG0280|consen 123 EALSLDISTSGTKIFVSDSRGSISGVYETEMV---------LEKVQTWKVHEFE------------AWTAKFSDKEP-NL 180 (339)
T ss_pred eeeEEEeeccCceEEEEcCCCcEEEEecceee---------eeeccccccccee------------eeeeecccCCC-ce
Confidence 34578999999999999999999855543321 1223477888754 45566665543 35
Q ss_pred EEEeeCCCeEEEEEcc-CCCc-----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 85 FLLSTNDQSFNIVDIK-PTNM-----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~-~~~~-----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+.+++.|+.+..||++ ++++ +.|...|.++.-+|-.+..+++|+.|..|++||.|.-
T Consensus 181 vytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm 243 (339)
T KOG0280|consen 181 VYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNM 243 (339)
T ss_pred EEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcc
Confidence 6678999999999998 4442 3456678899888877789999999999999999854
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=0.00011 Score=74.46 Aligned_cols=120 Identities=12% Similarity=0.200 Sum_probs=86.7
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCC-----cceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRG-----EYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~-----~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
-..|++|+....+||+|+.||..+|-.+.+..... ++.| ...+-+++.||. +.|..+.|+..
T Consensus 16 kL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~-~~~glaa~snLsmNQtLeGH~------------~sV~vvTWNe~ 82 (1189)
T KOG2041|consen 16 KLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDL-NKSGLAAASNLSMNQTLEGHN------------ASVMVVTWNEN 82 (1189)
T ss_pred eEEEEEEcccCCeEEeccccceeEEEEccccCCcc-cccccccccccchhhhhccCc------------ceEEEEEeccc
Confidence 46799999999999999999999999876543211 1111 111234667776 45899999865
Q ss_pred cCCceEEE-eeCCCeEEEEEccCCC-cccc-----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 80 KNQAHFLL-STNDQSFNIVDIKPTN-MEEL-----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 80 ~~~~~~l~-ss~D~tI~lWd~~~~~-~~~~-----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
. +.++ +..+|-|-+|-+=+|+ ++++ .+.|.+++|+.+| +.++..-.||.|-+=.++.+
T Consensus 83 ~---QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG-~kIcIvYeDGavIVGsvdGN 147 (1189)
T KOG2041|consen 83 N---QKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDG-TKICIVYEDGAVIVGSVDGN 147 (1189)
T ss_pred c---ccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCC-cEEEEEEccCCEEEEeeccc
Confidence 4 5565 4569999999998776 2221 3678999999985 78888889998877666555
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.26 E-value=9.5e-05 Score=67.74 Aligned_cols=107 Identities=17% Similarity=0.156 Sum_probs=60.3
Q ss_pred EEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeee-ccCcchhhcccccccceeeEEEEEeccC----
Q psy12356 7 EASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLRRKN---- 81 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~v~~sp~~~---- 81 (400)
+-|+||||+.+||.+...|+|++||+.+... ..+. ++.-..+ ....|..+.|.+...
T Consensus 47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l------------f~I~p~~~~~~d------~~~Aiagl~Fl~~~~s~~w 108 (282)
T PF15492_consen 47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSEL------------FVIPPAMSFPGD------LSDAIAGLIFLEYKKSAQW 108 (282)
T ss_pred eEEEECCCCcEEEEEcCCCeEEEEeccccee------------EEcCcccccCCc------cccceeeeEeecccccccc
Confidence 4589999999999999999999999985321 1111 1110000 012244444433221
Q ss_pred CceEEEeeCCCeEEEEEccCCC---c-ccc--------cccEEEEEEecCCCCEEEEEeCCC
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN---M-EEL--------NEVITAAEFHPIDCNLFVYSSSKG 131 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~---~-~~~--------~~~V~sv~f~p~~~~~las~s~Dg 131 (400)
...+++-..+|.++=+-+..+. . +.| ...|+++.++|.+.-+++.|....
T Consensus 109 s~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~ 170 (282)
T PF15492_consen 109 SYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQN 170 (282)
T ss_pred ceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCC
Confidence 1246666677777666653321 1 112 245899999998643444444433
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.1e-06 Score=78.32 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=60.3
Q ss_pred ccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 67 IEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 67 ~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
|-.-+.+|+|+||.+ .++++-.|..||+=....-. +-+|...|..++.-++ +.|+|+|.|++|++||++++
T Consensus 150 hvSml~dVavS~D~~--~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~--~~LlS~sGD~tlr~Wd~~sg 225 (390)
T KOG3914|consen 150 HVSMLLDVAVSPDDQ--FIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN--YLLLSGSGDKTLRLWDITSG 225 (390)
T ss_pred hhhhhheeeecCCCC--EEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC--ceeeecCCCCcEEEEecccC
Confidence 335588999999874 77788899999997654321 4578899999999874 57899999999999999999
Q ss_pred cccc
Q psy12356 142 ALCD 145 (400)
Q Consensus 142 ~~~~ 145 (400)
++++
T Consensus 226 k~L~ 229 (390)
T KOG3914|consen 226 KLLD 229 (390)
T ss_pred Cccc
Confidence 7653
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=5e-05 Score=76.24 Aligned_cols=110 Identities=14% Similarity=0.207 Sum_probs=64.9
Q ss_pred eEEEEEECCCCCeEE-EecCCC--eEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELLA-TGDKGG--RVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~La-s~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+.+.+|||||++|| +.+.+| .|++||+.++. .+.+..+. .......|+||+.
T Consensus 244 ~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~------------~~~lt~~~------------~~~~~~~~spDg~ 299 (430)
T PRK00178 244 LNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ------------LSRVTNHP------------AIDTEPFWGKDGR 299 (430)
T ss_pred CcCCeEECCCCCEEEEEEccCCCceEEEEECCCCC------------eEEcccCC------------CCcCCeEECCCCC
Confidence 345789999999888 455555 57788887532 11232222 1234578999874
Q ss_pred CceEEEee-CC--CeEEEEEccCCCcccc---cccEEEEEEecCCCCEEEEEeC-CC--eEEEEecccc
Q psy12356 82 QAHFLLST-ND--QSFNIVDIKPTNMEEL---NEVITAAEFHPIDCNLFVYSSS-KG--TIRLCDMRAA 141 (400)
Q Consensus 82 ~~~~l~ss-~D--~tI~lWd~~~~~~~~~---~~~V~sv~f~p~~~~~las~s~-Dg--~i~lWD~~~~ 141 (400)
.++.++ .+ ..|.++|+.+++.+.+ .......+|+|++ +.++..+. ++ .|.+||+.++
T Consensus 300 --~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg-~~i~~~~~~~~~~~l~~~dl~tg 365 (430)
T PRK00178 300 --TLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADG-KTLVMVHRQDGNFHVAAQDLQRG 365 (430)
T ss_pred --EEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCC-CEEEEEEccCCceEEEEEECCCC
Confidence 555544 33 4677778877764322 1223456889986 45665543 33 3556666554
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00033 Score=70.09 Aligned_cols=98 Identities=9% Similarity=0.088 Sum_probs=58.8
Q ss_pred eEEEEEECCCCCe-EEEecCC---CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 5 MREASQRFSDGEL-LATGDKG---GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 5 ~v~~v~fspdG~~-Las~s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
.+..-+|||||+. ++..+.+ ..|+++|+.+++ .+.+..+.+ .....+|+||+
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~---------~~~lt~~~g---------------~~~~~~~SPDG 244 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGK---------KEKIASSQG---------------MLVVSDVSKDG 244 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCc---------EEEEecCCC---------------cEEeeEECCCC
Confidence 3457899999985 6654443 468888887542 122222222 23456799997
Q ss_pred CCceEEE-ee--CCCeEEEEEccCCCccccc---ccEEEEEEecCCCCEEEEEeC
Q psy12356 81 NQAHFLL-ST--NDQSFNIVDIKPTNMEELN---EVITAAEFHPIDCNLFVYSSS 129 (400)
Q Consensus 81 ~~~~~l~-ss--~D~tI~lWd~~~~~~~~~~---~~V~sv~f~p~~~~~las~s~ 129 (400)
. +++. .+ .+..|.++|++++..+.++ .......|+||| +.|+..+.
T Consensus 245 ~--~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG-~~I~F~Sd 296 (419)
T PRK04043 245 S--KLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDD-KRIVFVSD 296 (419)
T ss_pred C--EEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCC-CEEEEEEC
Confidence 5 5554 33 3567888898887643332 223456899986 45555543
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.15 E-value=7.5e-06 Score=52.49 Aligned_cols=37 Identities=27% Similarity=0.495 Sum_probs=31.5
Q ss_pred eeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEE
Q psy12356 48 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVD 98 (400)
Q Consensus 48 ~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd 98 (400)
++++|++|+. .|++|+|+|+++ .+++++.|++|++||
T Consensus 3 ~~~~~~~h~~------------~i~~i~~~~~~~--~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSS------------SINSIAWSPDGN--FLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSS------------SEEEEEEETTSS--EEEEEETTSEEEEEE
T ss_pred EEEEEcCCCC------------cEEEEEEecccc--cceeeCCCCEEEEEC
Confidence 4678899974 499999999864 788899999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.2e-06 Score=81.48 Aligned_cols=113 Identities=6% Similarity=0.042 Sum_probs=83.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|..+.|-|.--+||+++..|-.+--|+..++ ++..|.--. +.+..++-+|.. .
T Consensus 210 ~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gk-----------lVa~~~t~~------------G~~~vm~qNP~N--a 264 (545)
T KOG1272|consen 210 IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGK-----------LVASIRTGA------------GRTDVMKQNPYN--A 264 (545)
T ss_pred CchhhhcccchhheeeecccCCceEEEeechhh-----------hhHHHHccC------------CccchhhcCCcc--c
Confidence 457778889988899999999988888887653 122221100 223445556653 2
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
.+-++...|+|-+|.....+ +..|.+.|.+++++|+| +++||++.|..++|||+|.-.
T Consensus 265 Vih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G-~YMaTtG~Dr~~kIWDlR~~~ 326 (545)
T KOG1272|consen 265 VIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGG-RYMATTGLDRKVKIWDLRNFY 326 (545)
T ss_pred eEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCC-cEEeecccccceeEeeecccc
Confidence 44467789999999987665 34678899999999975 899999999999999999863
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.0028 Score=69.35 Aligned_cols=196 Identities=11% Similarity=0.105 Sum_probs=108.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEE----EcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIF----QRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iw----d~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
..|.++.|-+|...|..+..+|.|.+. +..+. ..++. | .++.+|.+.+||||
T Consensus 76 ~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~---------~~E~V----G-----------~vd~GI~a~~WSPD 131 (928)
T PF04762_consen 76 DKIVSFQYLADSESLCIALASGDIILVREDPDPDED---------EIEIV----G-----------SVDSGILAASWSPD 131 (928)
T ss_pred CcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCc---------eeEEE----E-----------EEcCcEEEEEECCC
Confidence 357889999999999999999999999 33321 11111 1 12357999999999
Q ss_pred cCCceEEEeeCCCeEEEEEcc----------C---C--------------Cccc------------c------------c
Q psy12356 80 KNQAHFLLSTNDQSFNIVDIK----------P---T--------------NMEE------------L------------N 108 (400)
Q Consensus 80 ~~~~~~l~ss~D~tI~lWd~~----------~---~--------------~~~~------------~------------~ 108 (400)
+. .++....++++-+..-+ . | ++++ . .
T Consensus 132 ~E--lla~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~d 209 (928)
T PF04762_consen 132 EE--LLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWD 209 (928)
T ss_pred cC--EEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccC
Confidence 74 55566667776653211 0 0 0100 0 0
Q ss_pred ccEEEEEEecCCCCEEEEEeC---C---CeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceee
Q psy12356 109 EVITAAEFHPIDCNLFVYSSS---K---GTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKE 182 (400)
Q Consensus 109 ~~V~sv~f~p~~~~~las~s~---D---g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (400)
..-..++|..|| .+||.++- . +.+|+|+-. |.+... +..+.++..+-.| .|.+...|
T Consensus 210 d~~~~ISWRGDG-~yFAVss~~~~~~~~R~iRVy~Re-G~L~st-SE~v~gLe~~l~W--------------rPsG~lIA 272 (928)
T PF04762_consen 210 DGRVRISWRGDG-EYFAVSSVEPETGSRRVIRVYSRE-GELQST-SEPVDGLEGALSW--------------RPSGNLIA 272 (928)
T ss_pred CCceEEEECCCC-cEEEEEEEEcCCCceeEEEEECCC-ceEEec-cccCCCccCCccC--------------CCCCCEEE
Confidence 012468899985 78887764 2 589999954 543211 1122222111111 24443333
Q ss_pred cCC---CCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCC
Q psy12356 183 DNR---RKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHME 255 (400)
Q Consensus 183 ~~~---~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~ 255 (400)
+.. ....|-+|.-+.-. . ..|..+ +......|..++|++|+.+||-.-...|+||-..+-
T Consensus 273 ~~q~~~~~~~VvFfErNGLr-h----geF~l~--------~~~~~~~v~~l~Wn~ds~iLAv~~~~~vqLWt~~NY 335 (928)
T PF04762_consen 273 SSQRLPDRHDVVFFERNGLR-H----GEFTLR--------FDPEEEKVIELAWNSDSEILAVWLEDRVQLWTRSNY 335 (928)
T ss_pred EEEEcCCCcEEEEEecCCcE-e----eeEecC--------CCCCCceeeEEEECCCCCEEEEEecCCceEEEeeCC
Confidence 211 12344444422110 0 112111 111234689999999999999643334999998864
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.7e-05 Score=77.99 Aligned_cols=165 Identities=17% Similarity=0.256 Sum_probs=96.7
Q ss_pred eeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC-------c----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEec
Q psy12356 70 KINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN-------M----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDM 138 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~-------~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~ 138 (400)
+|..++-... .+.+++++.|+|||+|.+++.. + +.|...|.++.|-.+ ...++ |.|+-|.+||.
T Consensus 737 ~iRai~AidN--ENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~-lr~i~--ScD~giHlWDP 811 (1034)
T KOG4190|consen 737 KIRAIAAIDN--ENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLAD-LRSIA--SCDGGIHLWDP 811 (1034)
T ss_pred HhHHHHhccc--ccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeec-cceee--eccCcceeecc
Confidence 3444443322 3479999999999999997531 1 346778999998775 34444 56999999998
Q ss_pred ccccccccccceeccCcccceeceeccCchhhhhhcccCcce-eecCCCCCeEEEeecccccccCcccccccCCCCCCCc
Q psy12356 139 RAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRRE-KEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNK 217 (400)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 217 (400)
--+.++..-...-+.....++.- ...-++.. ++.-+...+++++|.|...- ..-.++-+.|
T Consensus 812 Figr~Laq~~dapk~~a~~~ikc-----------l~nv~~~iliAgcsaeSTVKl~DaRsce~-~~E~kVcna~------ 873 (1034)
T KOG4190|consen 812 FIGRLLAQMEDAPKEGAGGNIKC-----------LENVDRHILIAGCSAESTVKLFDARSCEW-TCELKVCNAP------ 873 (1034)
T ss_pred cccchhHhhhcCcccCCCceeEe-----------cccCcchheeeeccchhhheeeecccccc-eeeEEeccCC------
Confidence 77754321000000000000000 00112222 22224578999999986431 1101111111
Q ss_pred ccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 218 SFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 218 ~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
+....+.+++.-|.|+.||.+ +.|+|-+-|.+++. .+..+
T Consensus 874 ----~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~-vINsw 914 (1034)
T KOG4190|consen 874 ----GPNALTRAIAVADKGNKLAAALSNGCIAILDARNGK-VINSW 914 (1034)
T ss_pred ----CCchheeEEEeccCcchhhHHhcCCcEEEEecCCCc-eeccC
Confidence 223568899999999999865 78999999999874 34444
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.5e-05 Score=84.99 Aligned_cols=143 Identities=17% Similarity=0.284 Sum_probs=101.9
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|+.+.|+..|+-...+..||.+-+|.... ++.-..+.|.. ...+.+|...
T Consensus 2252 s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p------------k~~~s~qchnk------------~~~Df~Fi~s---- 2303 (2439)
T KOG1064|consen 2252 SRVTRSRFNHQGNKFGIVDGDGDLSLWQASP------------KPYTSWQCHNK------------ALSDFRFIGS---- 2303 (2439)
T ss_pred chhhhhhhcccCCceeeeccCCceeecccCC------------cceeccccCCc------------cccceeeeeh----
Confidence 4578889999999999999999999999862 23445677763 2456677641
Q ss_pred eEEEe---eCCCeEEEEEccCCC---c--ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 84 HFLLS---TNDQSFNIVDIKPTN---M--EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~s---s~D~tI~lWd~~~~~---~--~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.++++ +.++.+-+||.-... + .-|.+.++.+++.|.. ++|+|||.+|.|.+||++..++.+.+.. .
T Consensus 2304 ~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~-qllisggr~G~v~l~D~rqrql~h~~~~-~---- 2377 (2439)
T KOG1064|consen 2304 LLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKH-QLLISGGRKGEVCLFDIRQRQLRHTFQA-L---- 2377 (2439)
T ss_pred hhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcc-eEEEecCCcCcEEEeehHHHHHHHHhhh-h----
Confidence 45543 357899999974221 1 3466778999999985 8999999999999999999866443211 0
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccc
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAAL 200 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~ 200 (400)
..+-...+++..|.|+||++....+
T Consensus 2378 --------------------~~~~~f~~~ss~g~ikIw~~s~~~l 2402 (2439)
T KOG1064|consen 2378 --------------------DTREYFVTGSSEGNIKIWRLSEFGL 2402 (2439)
T ss_pred --------------------hhhheeeccCcccceEEEEccccch
Confidence 0111233456789999999987543
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0012 Score=66.01 Aligned_cols=28 Identities=11% Similarity=0.130 Sum_probs=19.2
Q ss_pred EEEECCCCcEEE-Eec-C--CeEEEEeCCCCC
Q psy12356 229 DVKISNSGRYMI-SRD-Y--LCVKVWDLHMES 256 (400)
Q Consensus 229 ~v~fSpdg~~la-s~~-D--~tIklWD~~~~~ 256 (400)
.-.|||||+.|+ +++ . ..|.+.|+.++.
T Consensus 281 ~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~ 312 (419)
T PRK04043 281 NGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGS 312 (419)
T ss_pred ccEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 347999999887 442 2 367777887653
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00067 Score=61.67 Aligned_cols=193 Identities=11% Similarity=0.044 Sum_probs=111.8
Q ss_pred CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEE
Q psy12356 16 ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFN 95 (400)
Q Consensus 16 ~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~ 95 (400)
.+||.|+.-|...+|..++.+. - +..-..|... +++ ++..+-+ ...++.++.|.|+|
T Consensus 85 ~~la~gG~~g~fd~~~~~tn~~-------h---~~~cd~snn~------v~~---~~r~cd~----~~~~~i~sndht~k 141 (344)
T KOG4532|consen 85 VTLADGGASGQFDLFACNTNDG-------H---LYQCDVSNND------VTL---VKRYCDL----KFPLNIASNDHTGK 141 (344)
T ss_pred cEEEeccccceeeeecccCccc-------c---eeeecccccc------hhh---hhhhccc----ccceeeccCCccee
Confidence 4789998899999999875321 0 1111122211 000 1111111 12566788999999
Q ss_pred EEEccCCCc--ccccc--cEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceec-cCcccceeceeccCchhh
Q psy12356 96 IVDIKPTNM--EELNE--VITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLI-EGTNCNCQGLIVPESKRE 170 (400)
Q Consensus 96 lWd~~~~~~--~~~~~--~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 170 (400)
+.+++.+.. .-|.. .+++++++|++ ...++.+....|-.+-+.....- .+. ........+...+
T Consensus 142 ~~~~~~~s~~~~~h~~~~~~ns~~~snd~-~~~~~Vgds~~Vf~y~id~~sey-----~~~~~~a~t~D~gF~~S----- 210 (344)
T KOG4532|consen 142 TMVVSGDSNKFAVHNQNLTQNSLHYSNDP-SWGSSVGDSRRVFRYAIDDESEY-----IENIYEAPTSDHGFYNS----- 210 (344)
T ss_pred EEEEecCcccceeeccccceeeeEEcCCC-ceEEEecCCCcceEEEeCCccce-----eeeeEecccCCCceeee-----
Confidence 999987653 22322 37899999974 77888888888888887765320 011 0000001111111
Q ss_pred hhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc--EEE-EecCCeE
Q psy12356 171 ERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR--YMI-SRDYLCV 247 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~--~la-s~~D~tI 247 (400)
.+......|.+..||++.+||+|..+.... +.... + ..|.+.+..+.|||.|. +|. +-..+-+
T Consensus 211 ---~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~----~~sst----r---p~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~ 276 (344)
T KOG4532|consen 211 ---FSENDLQFAVVFQDGTCAIYDVRNMATPMA----EISST----R---PHHNGAFRVCRFSLYGLLDLLFISEHFSRV 276 (344)
T ss_pred ---eccCcceEEEEecCCcEEEEEecccccchh----hhccc----C---CCCCCceEEEEecCCCcceEEEEecCcceE
Confidence 112222344556899999999997543221 11111 1 14778999999999776 333 4456889
Q ss_pred EEEeCCCCC
Q psy12356 248 KVWDLHMES 256 (400)
Q Consensus 248 klWD~~~~~ 256 (400)
.|-|+++..
T Consensus 277 hv~D~R~~~ 285 (344)
T KOG4532|consen 277 HVVDTRNYV 285 (344)
T ss_pred EEEEcccCc
Confidence 999999864
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.1e-05 Score=71.49 Aligned_cols=230 Identities=13% Similarity=0.046 Sum_probs=137.6
Q ss_pred eeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC---c----ccccccEEEEEEecCCCCEEEEEeC-CCeEEEEecccc
Q psy12356 70 KINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN---M----EELNEVITAAEFHPIDCNLFVYSSS-KGTIRLCDMRAA 141 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~---~----~~~~~~V~sv~f~p~~~~~las~s~-Dg~i~lWD~~~~ 141 (400)
.|+.|.-... ..+++++-||.+|.|.-..-. + ..|...|.+++.+-+ +.+++|.+. |..+|++|+..-
T Consensus 11 ~i~hv~~tka---~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~d-g~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 11 VITHVFPTKA---KFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYD-GWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred eeeeEeeehh---heEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhcccc-ceeEeeccCcccceeEEEeecc
Confidence 3565554432 256778999999999854312 1 234566777777776 478899777 999999998876
Q ss_pred cccccccceeccCcccceeceeccCchhhhhhcccCc--ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccc
Q psy12356 142 ALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNR--REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSF 219 (400)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
....... ..-+.....| +....+. ...++.-.+|.|.++|-+...+.....+
T Consensus 87 DminmiK--L~~lPg~a~w-----------v~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fk------------- 140 (558)
T KOG0882|consen 87 DMINMIK--LVDLPGFAEW-----------VTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFK------------- 140 (558)
T ss_pred chhhhcc--cccCCCceEE-----------ecCCCCeeeeEEeecccCCCcEEECCcCCcCccceec-------------
Confidence 3211000 0000001111 0111111 2233344688999999876543322111
Q ss_pred ccccccCeEEEEECCCCcEEEEec-CCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCc
Q psy12356 220 FSEIISSISDVKISNSGRYMISRD-YLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASP 298 (400)
Q Consensus 220 ~~~h~~~V~~v~fSpdg~~las~~-D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~ 298 (400)
.-|.++|..+.++|-+...+|.+ .|.|.-|.... +.+-.+. + + .|.+.....+.
T Consensus 141 -klH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~---~~qfPr~-------~---------l-~~~~K~eTdLy---- 195 (558)
T KOG0882|consen 141 -KLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG---PFQFPRT-------N---------L-NFELKHETDLY---- 195 (558)
T ss_pred -ccccCceEEEEeeccccceeeccccceeEeecCCC---cccCccc-------c---------c-cccccccchhh----
Confidence 13778999999999999998865 69999998874 2221110 0 0 01111000000
Q ss_pred cceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEE-ecCCeEEEEeCccCCeeEEEEeecC
Q psy12356 299 RRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLS-ADDLRINLWHLEITDQSFNIVDIKP 377 (400)
Q Consensus 299 ~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las-~~D~~i~lW~~~~~~~~~~~~~~~~ 377 (400)
.+ .-......++.|||+|..+++ +.|.+||+.+..+++ ..+.+|.-+
T Consensus 196 --~f-----------------------------~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGk-lvqeiDE~~ 243 (558)
T KOG0882|consen 196 --GF-----------------------------PKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGK-LVQEIDEVL 243 (558)
T ss_pred --cc-----------------------------cccccCccceEEccccCcccccCcccEEEEEEeccch-hhhhhhccc
Confidence 00 001223458999999999999 579999999999755 678888888
Q ss_pred Ccccchhhh
Q psy12356 378 TNMEELNEV 386 (400)
Q Consensus 378 ~~~~~~~~~ 386 (400)
.+..++.+.
T Consensus 244 t~~~~q~ks 252 (558)
T KOG0882|consen 244 TDAQYQPKS 252 (558)
T ss_pred hhhhhcccc
Confidence 776666554
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0038 Score=61.49 Aligned_cols=295 Identities=13% Similarity=0.147 Sum_probs=146.1
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
+..+.|||-|.+||+...- -|.+|.-... . .+..|. |. -|..+.|+|.+ ++
T Consensus 35 ~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~---------~--~l~~~~-~~-------------~V~~~~fSP~~---kY 85 (561)
T COG5354 35 VAYVSESPLGTYLFSEHAA-GVECWGGPSK---------A--KLVRFR-HP-------------DVKYLDFSPNE---KY 85 (561)
T ss_pred hhheeecCcchheehhhcc-ceEEccccch---------h--heeeee-cC-------------CceecccCccc---ce
Confidence 5688999999999987544 5889987632 1 233443 22 16667777765 45
Q ss_pred EEe-e---------------CCCeEEEEEccCCCc----cccccc--EE-EEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 86 LLS-T---------------NDQSFNIVDIKPTNM----EELNEV--IT-AAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 86 l~s-s---------------~D~tI~lWd~~~~~~----~~~~~~--V~-sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
|+. + +++.+.+||+.+|.+ ...... .+ -+.|+-++ ++.|-- -...+++.++ ++.
T Consensus 86 L~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D-~y~ARv-v~~sl~i~e~-t~n 162 (561)
T COG5354 86 LVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDD-KYVARV-VGSSLYIHEI-TDN 162 (561)
T ss_pred eeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecc-hhhhhh-ccCeEEEEec-CCc
Confidence 543 2 233689999999873 122222 33 57788765 454444 3456888887 442
Q ss_pred ccccccceeccCcccceeceeccCchh-hh-hhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccc
Q psy12356 143 LCDRHSKCLIEGTNCNCQGLIVPESKR-EE-RQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFF 220 (400)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
... .....+....+....+++... ++ ++..| -.....+++++|.+-....... + +++
T Consensus 163 ~~~---~p~~~lr~~gi~dFsisP~~n~~~la~~tP-----Ek~~kpa~~~i~sIp~~s~l~t--k-----------~lf 221 (561)
T COG5354 163 IEE---HPFKNLRPVGILDFSISPEGNHDELAYWTP-----EKLNKPAMVRILSIPKNSVLVT--K-----------NLF 221 (561)
T ss_pred ccc---CchhhccccceeeEEecCCCCCceEEEEcc-----ccCCCCcEEEEEEccCCCeeee--e-----------eeE
Confidence 211 112222222333333332110 00 01111 1234577888887753221100 1 111
Q ss_pred cccccCeEEEEECCCCcEEEE---e----c-----CCeEEEEeCCCCCCcee-eec--CCC--cCCCCc-cc--CCCCCc
Q psy12356 221 SEIISSISDVKISNSGRYMIS---R----D-----YLCVKVWDLHMESRPVE-TYP--THT--KEENGQ-LR--DPSNIT 280 (400)
Q Consensus 221 ~~h~~~V~~v~fSpdg~~las---~----~-----D~tIklWD~~~~~~~l~-~~~--~h~--~~~~g~-~~--~~~~~~ 280 (400)
.. .. ..+.|.+.|++|.. + + ..++.|.+++....++. ... -|. +.|.+. +. ++-...
T Consensus 222 k~--~~-~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa 298 (561)
T COG5354 222 KV--SG-VQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPA 298 (561)
T ss_pred ee--cc-cEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEeccccc
Confidence 00 12 35889999997641 1 1 35788888885543333 111 132 233332 11 100111
Q ss_pred eeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccc-------hhhc-------c--cccceeEEEEc
Q psy12356 281 ALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRG-------IFAD-------A--HTYHISSTSVN 344 (400)
Q Consensus 281 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~-------~~~~-------g--h~~~V~~i~fs 344 (400)
++...++ ...+....-...=+.+.|||.+.++..++-. .+.. | ......-+.||
T Consensus 299 ~~s~~~l----------r~Nl~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~ws 368 (561)
T COG5354 299 SVSVFDL----------RGNLRFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWS 368 (561)
T ss_pred ceeeccc----------ccceEEecCCcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecCCceEeecc
Confidence 1111111 1111001112223567788888776543311 0100 0 01123347899
Q ss_pred cCCCEEEEe------c-CCeEEEEeCccC
Q psy12356 345 SDQETYLSA------D-DLRINLWHLEIT 366 (400)
Q Consensus 345 pDg~~las~------~-D~~i~lW~~~~~ 366 (400)
|||+++-++ . |+.|+||++...
T Consensus 369 pd~qF~~~~~ts~k~~~Dn~i~l~~v~g~ 397 (561)
T COG5354 369 PDGQFYDTDTTSEKLRVDNSIKLWDVYGA 397 (561)
T ss_pred CCceEEEecCCCcccccCcceEEEEecCc
Confidence 999988763 1 788999998754
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00013 Score=72.32 Aligned_cols=124 Identities=19% Similarity=0.236 Sum_probs=81.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|++|..++-..+||+|..||.|..||....... +...+-.....|- ..+. ...|+++.|+.++ -
T Consensus 176 ~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv-----~~l~~~~~v~s~p-g~~~------~~svTal~F~d~g--L 241 (703)
T KOG2321|consen 176 GELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRV-----GTLDAASSVNSHP-GGDA------APSVTALKFRDDG--L 241 (703)
T ss_pred ccceeeeecCccceEEecccCceEEEecchhhhhh-----eeeecccccCCCc-cccc------cCcceEEEecCCc--e
Confidence 67899999999999999999999999997653210 0000000111110 0000 0238999998765 3
Q ss_pred eEEEeeCCCeEEEEEccCCC---ccccc--ccEEEEEEecCCC-CEEEEEeCCCeEEEEeccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN---MEELN--EVITAAEFHPIDC-NLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~---~~~~~--~~V~sv~f~p~~~-~~las~s~Dg~i~lWD~~~~~ 142 (400)
+++++..+|.|.|+|++..+ .+.|. -+|..+.|.+.+. +.++| .....+||||-.+|+
T Consensus 242 ~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk 305 (703)
T KOG2321|consen 242 HVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVS-MDKRILKIWDECTGK 305 (703)
T ss_pred eEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEe-cchHHhhhcccccCC
Confidence 67788899999999998776 23443 3678888876543 34443 355788999987773
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.1e-05 Score=74.46 Aligned_cols=124 Identities=12% Similarity=0.166 Sum_probs=82.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCC-cceee-eeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRG-EYNVY-STFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~-~~~~~-~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
-|++++||.+|.-|.++-.|--|++++..-+....+-... ..... +.++||... ..|+.|-|- |+.
T Consensus 338 ~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~----------~TVKgVNFf--GPr 405 (559)
T KOG1334|consen 338 NITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNS----------RTVKGVNFF--GPR 405 (559)
T ss_pred cceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccc----------cccceeeec--cCc
Confidence 3789999977665555566888999964322100000000 00112 247899754 457777652 433
Q ss_pred ceEEE-eeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 83 AHFLL-STNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 83 ~~~l~-ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
..+++ +|.-|.|-|||-.++++ +.-...|+++.=||-. =+|||++.|.-||||-..+.
T Consensus 406 sEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~-PvLAsSGid~DVKIWTP~~~ 468 (559)
T KOG1334|consen 406 SEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHL-PVLASSGIDHDVKIWTPLTA 468 (559)
T ss_pred cceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCC-chhhccCCccceeeecCCcc
Confidence 35665 56679999999888873 3334589999999975 47899999999999998655
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.024 Score=52.32 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=28.1
Q ss_pred cccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 334 HTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 334 h~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
....|..+..||||+.||+. -+|.|-||++..
T Consensus 228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPs 260 (282)
T PF15492_consen 228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPS 260 (282)
T ss_pred CCCceEEEEECCCCCEEEEEEcCCeEEEEecCc
Confidence 35678999999999999997 699999999864
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0022 Score=60.44 Aligned_cols=138 Identities=15% Similarity=0.244 Sum_probs=84.0
Q ss_pred EEECCCCcEEEEec------CCeEEEEeCCCCCCceeeecCCC-------cCCCCccc--CCCCCce------eec--Cc
Q psy12356 230 VKISNSGRYMISRD------YLCVKVWDLHMESRPVETYPTHT-------KEENGQLR--DPSNITA------LRV--PQ 286 (400)
Q Consensus 230 v~fSpdg~~las~~------D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~--~~~~~~~------i~l--~~ 286 (400)
-.|||||++|.+++ .|.|-|||+..+...+.+|..|. ..+||+.+ +++.+.| -|| -.
T Consensus 56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~t 135 (305)
T PF07433_consen 56 GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDT 135 (305)
T ss_pred EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhh
Confidence 68999999998763 47899999996656677887553 35788632 3433322 222 11
Q ss_pred ccccceee---ccCc-cceec--cccccceEEEEEcCCCcEEeecc------------------c--chhh------ccc
Q psy12356 287 IKPIELTV---EASP-RRIFA--NAHTYHINSISVNSDQLTVEASP------------------R--GIFA------DAH 334 (400)
Q Consensus 287 ~~~~~~~~---~~~~-~~~~~--~~~~~~i~~i~~s~dg~~~~~~~------------------~--~~~~------~gh 334 (400)
-.+.=..+ .+.. .+..+ .-|...|..+++.+||..+.+.- . ..+. ..=
T Consensus 136 M~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l 215 (305)
T PF07433_consen 136 MQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRL 215 (305)
T ss_pred cCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhh
Confidence 11110011 1221 11112 22666799999999998765310 0 0000 122
Q ss_pred ccceeEEEEccCCCEEEE-e-cCCeEEEEeCccCC
Q psy12356 335 TYHISSTSVNSDQETYLS-A-DDLRINLWHLEITD 367 (400)
Q Consensus 335 ~~~V~~i~fspDg~~las-~-~D~~i~lW~~~~~~ 367 (400)
.+.|-||+|++||..+|. + .-+.+.+||..+++
T Consensus 216 ~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~ 250 (305)
T PF07433_consen 216 NGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGR 250 (305)
T ss_pred CCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCC
Confidence 467889999999998865 5 57889999987644
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=97.77 E-value=8e-05 Score=82.30 Aligned_cols=64 Identities=9% Similarity=0.080 Sum_probs=39.5
Q ss_pred ccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCc-ccCCCCCceeecCcccc
Q psy12356 222 EIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQ-LRDPSNITALRVPQIKP 289 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~-~~~~~~~~~i~l~~~~~ 289 (400)
.|.+.+++++|-|.-++|+|+ .+|.|+|||++.. +..+.|..- . ... ++.++..+.+++|.++.
T Consensus 2334 ~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqr-ql~h~~~~~--~-~~~~f~~~ss~g~ikIw~~s~ 2399 (2439)
T KOG1064|consen 2334 CHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQR-QLRHTFQAL--D-TREYFVTGSSEGNIKIWRLSE 2399 (2439)
T ss_pred ecCCCceEEEEcCcceEEEecCCcCcEEEeehHHH-HHHHHhhhh--h-hhheeeccCcccceEEEEccc
Confidence 566778888888888888875 4788888888854 234444320 1 111 22345566777776643
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.046 Score=53.11 Aligned_cols=68 Identities=13% Similarity=0.135 Sum_probs=46.0
Q ss_pred EEeccCCceEEEee---------CCCeEEEEEccCCCcc-cc----------cccEEEEEEecCCCCEEEEEeC-CCeEE
Q psy12356 76 WLRRKNQAHFLLST---------NDQSFNIVDIKPTNME-EL----------NEVITAAEFHPIDCNLFVYSSS-KGTIR 134 (400)
Q Consensus 76 ~sp~~~~~~~l~ss---------~D~tI~lWd~~~~~~~-~~----------~~~V~sv~f~p~~~~~las~s~-Dg~i~ 134 (400)
++||+. ..+++.+ .+..|.+||.++.+.. ++ ...-..++++|+|..++++--. +..|-
T Consensus 53 ~spDg~-~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~ 131 (352)
T TIGR02658 53 VASDGS-FFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVG 131 (352)
T ss_pred ECCCCC-EEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEE
Confidence 888864 2333456 6889999999988731 11 1122478899997544444434 89999
Q ss_pred EEeccccccc
Q psy12356 135 LCDMRAAALC 144 (400)
Q Consensus 135 lWD~~~~~~~ 144 (400)
+.|+.+++.+
T Consensus 132 VvD~~~~kvv 141 (352)
T TIGR02658 132 VVDLEGKAFV 141 (352)
T ss_pred EEECCCCcEE
Confidence 9999998643
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0034 Score=59.00 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=29.6
Q ss_pred cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 106 ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 106 ~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+|...+++++|.|. ..++.||..|..+-+||+-.+
T Consensus 195 ~h~~~~~~l~Wd~~-~~~LfSg~~d~~vi~wdigg~ 229 (404)
T KOG1409|consen 195 GHTGEVTCLKWDPG-QRLLFSGASDHSVIMWDIGGR 229 (404)
T ss_pred CcccceEEEEEcCC-CcEEEeccccCceEEEeccCC
Confidence 35567899999996 578999999999999998655
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0055 Score=60.38 Aligned_cols=191 Identities=17% Similarity=0.201 Sum_probs=112.6
Q ss_pred EEEEEECCCC--CeEEE-----ecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 6 REASQRFSDG--ELLAT-----GDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 6 v~~v~fspdG--~~Las-----~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
|..-.|||-| ..||. ...+++++||.+..... . ..++|..-. =..+.|++
T Consensus 176 i~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~--------l-~tk~lfk~~--------------~~qLkW~~ 232 (561)
T COG5354 176 ILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSV--------L-VTKNLFKVS--------------GVQLKWQV 232 (561)
T ss_pred eeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCe--------e-eeeeeEeec--------------ccEEEEec
Confidence 4566778854 44553 35678888888763221 0 111221100 12467887
Q ss_pred ccCCceEEE-e---e-----CCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEe--CCCeEEEEeccccccc
Q psy12356 79 RKNQAHFLL-S---T-----NDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSS--SKGTIRLCDMRAAALC 144 (400)
Q Consensus 79 ~~~~~~~l~-s---s-----~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s--~Dg~i~lWD~~~~~~~ 144 (400)
.+.--.+++ . + ....+.|.+++...++ ...++|...+|.|.+ +.|+..+ .+.++.++|++.+-
T Consensus 233 ~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S-~~F~vi~g~~pa~~s~~~lr~Nl-- 309 (561)
T COG5354 233 LGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLS-SRFAVISGYMPASVSVFDLRGNL-- 309 (561)
T ss_pred CCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccC-CceeEEecccccceeecccccce--
Confidence 764211222 1 1 1346889998866543 446889999999986 5666555 58899999999871
Q ss_pred ccccceeccCcccceeceeccCchhhhhhcccCcceeec---CCCCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 145 DRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKED---NRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
...+++++++...++|..+.+.. +...|.|-+||....-.+- ..|.
T Consensus 310 ----------------~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~---~~~~------------ 358 (561)
T COG5354 310 ----------------RFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVA---GAFN------------ 358 (561)
T ss_pred ----------------EEecCCcccccccccCcccEEEEecCCccccceEEeccCCceEEE---EEee------------
Confidence 11245555555666665543222 3456788888876432221 1111
Q ss_pred ccccCeEEEEECCCCcEEEE--ec-----CCeEEEEeCCCC
Q psy12356 222 EIISSISDVKISNSGRYMIS--RD-----YLCVKVWDLHME 255 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~~las--~~-----D~tIklWD~~~~ 255 (400)
+ ...+-+.|||||.++.+ .+ |..|+|||+...
T Consensus 359 ~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~ 397 (561)
T COG5354 359 G--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGA 397 (561)
T ss_pred c--CCceEeeccCCceEEEecCCCcccccCcceEEEEecCc
Confidence 1 12445889999998763 22 889999999853
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0012 Score=65.93 Aligned_cols=101 Identities=16% Similarity=0.237 Sum_probs=72.2
Q ss_pred CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeee--ccCcchhhcccccccceeeEEEEEeccCCceEEEeeCC
Q psy12356 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ--SHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTND 91 (400)
Q Consensus 14 dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~--~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D 91 (400)
|-..||-|-..|.|.++++.+++ +-..+. +|- +.|+++.|+.+- +.+-+++.|
T Consensus 69 ~t~~lvlgt~~g~v~~ys~~~g~-----------it~~~st~~h~------------~~v~~~~~~~~~--~ciyS~~ad 123 (541)
T KOG4547|consen 69 DTSMLVLGTPQGSVLLYSVAGGE-----------ITAKLSTDKHY------------GNVNEILDAQRL--GCIYSVGAD 123 (541)
T ss_pred CceEEEeecCCccEEEEEecCCe-----------EEEEEecCCCC------------Ccceeeeccccc--CceEecCCc
Confidence 44567778888999999998653 222333 333 568888887543 356678889
Q ss_pred CeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 92 QSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 92 ~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
..+-.|+.+.+.. +.-...+.+++.+||+ .+++++| ++|++||+.+++
T Consensus 124 ~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~-~~l~~as--~~ik~~~~~~ke 175 (541)
T KOG4547|consen 124 LKVVYILEKEKVIIRIWKEQKPLVSSLCISPDG-KILLTAS--RQIKVLDIETKE 175 (541)
T ss_pred eeEEEEecccceeeeeeccCCCccceEEEcCCC-CEEEecc--ceEEEEEccCce
Confidence 9999999988763 2234568899999985 5666654 589999998873
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00023 Score=66.70 Aligned_cols=138 Identities=16% Similarity=0.134 Sum_probs=86.7
Q ss_pred EEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcc
Q psy12356 125 VYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRH 204 (400)
Q Consensus 125 as~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~ 204 (400)
++.+.+..|-|=|+.++.. ..+ .+.++.-..++......+..|++.|.|-..|+|.+.....
T Consensus 228 fs~G~sqqv~L~nvetg~~-----qsf------------~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~- 289 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ-----QSF------------QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNG- 289 (425)
T ss_pred ecccccceeEEEEeecccc-----ccc------------ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCC-
Confidence 4556677788888888721 111 0111122233444455667789999999999997632210
Q ss_pred cccccCCCCCCCcccccccccCeEEEEECC-CCcEEEE-ecCCeEEEEeCCCCCCc---eeeecCCCc----------CC
Q psy12356 205 SKFFEEPEDPTNKSFFSEIISSISDVKISN-SGRYMIS-RDYLCVKVWDLHMESRP---VETYPTHTK----------EE 269 (400)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp-dg~~las-~~D~tIklWD~~~~~~~---l~~~~~h~~----------~~ 269 (400)
+ -... --|...|+++..-. ++.+|.+ .-+++|+|||.+.- ++ +++|+||.+ ..
T Consensus 290 ---~-------~a~r-lyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~-K~~~~V~qYeGHvN~~a~l~~~v~~e 357 (425)
T KOG2695|consen 290 ---W-------CAQR-LYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRAT-KCKKSVMQYEGHVNLSAYLPAHVKEE 357 (425)
T ss_pred ---c-------ceEE-EEcCcchhhhhhhccccceEeeccCcCceeEeeehhh-hcccceeeeecccccccccccccccc
Confidence 0 0000 13667788877544 5666655 55999999999975 35 889999963 23
Q ss_pred CCcccCCCCCceeecCcccccce
Q psy12356 270 NGQLRDPSNITALRVPQIKPIEL 292 (400)
Q Consensus 270 ~g~~~~~~~~~~i~l~~~~~~~~ 292 (400)
+|-+++.+.|.-.|+|.+....+
T Consensus 358 eg~I~s~GdDcytRiWsl~~ghL 380 (425)
T KOG2695|consen 358 EGSIFSVGDDCYTRIWSLDSGHL 380 (425)
T ss_pred cceEEEccCeeEEEEEecccCce
Confidence 55566778888888887754443
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0025 Score=62.21 Aligned_cols=109 Identities=18% Similarity=0.284 Sum_probs=78.0
Q ss_pred eEEEEEECCCCCeEEEecCCC-eEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELLATGDKGG-RVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg-~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|.-..+.-|++-++.|..|| .+-|+|..+++ .+.+.+.- +-|.++..+|++
T Consensus 361 ~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e------------~kr~e~~l------------g~I~av~vs~dG--- 413 (668)
T COG4946 361 GVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE------------VKRIEKDL------------GNIEAVKVSPDG--- 413 (668)
T ss_pred ceEEEEEccCCcceEEeccCCceEEEEecCCce------------EEEeeCCc------------cceEEEEEcCCC---
Confidence 467778888888888888888 88899987642 11222111 237889999887
Q ss_pred eEEE-eeCCCeEEEEEccCCCcccc----cccEEEEEEecCCCCEEEEEeCCC----eEEEEecccc
Q psy12356 84 HFLL-STNDQSFNIVDIKPTNMEEL----NEVITAAEFHPIDCNLFVYSSSKG----TIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~-ss~D~tI~lWd~~~~~~~~~----~~~V~sv~f~p~~~~~las~s~Dg----~i~lWD~~~~ 141 (400)
++++ +-....+-+.|+++|..+.. .+.|+...|||++ ..||.+-.+| .|||+|+.++
T Consensus 414 K~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~ns-r~iAYafP~gy~tq~Iklydm~~~ 479 (668)
T COG4946 414 KKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNS-RWIAYAFPEGYYTQSIKLYDMDGG 479 (668)
T ss_pred cEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCc-eeEEEecCcceeeeeEEEEecCCC
Confidence 5555 44456888889999884322 3569999999985 7889887765 5778887776
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0023 Score=58.26 Aligned_cols=115 Identities=13% Similarity=0.128 Sum_probs=80.9
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
++++++|+|++++++.+....|-.|.++... +..+++...-+. ..=.+..|+.. +.++
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~s---------ey~~~~~~a~t~-----------D~gF~~S~s~~--~~~F 218 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDES---------EYIENIYEAPTS-----------DHGFYNSFSEN--DLQF 218 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCcc---------ceeeeeEecccC-----------CCceeeeeccC--cceE
Confidence 6799999999999999999999999988532 223332222221 12346678754 4588
Q ss_pred EEeeCCCeEEEEEccCCC---------cccccccEEEEEEecCCCC-EEEEEeCCCeEEEEeccccc
Q psy12356 86 LLSTNDQSFNIVDIKPTN---------MEELNEVITAAEFHPIDCN-LFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~---------~~~~~~~V~sv~f~p~~~~-~las~s~Dg~i~lWD~~~~~ 142 (400)
+++..||++.|||++.-. ...|.+.|+.+.|+|.|.. +|..+-.=+.+.+-|+|+..
T Consensus 219 Av~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~ 285 (344)
T KOG4532|consen 219 AVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYV 285 (344)
T ss_pred EEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCc
Confidence 899999999999997532 1246788999999986532 33333334789999999883
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0057 Score=57.55 Aligned_cols=205 Identities=13% Similarity=0.213 Sum_probs=121.9
Q ss_pred eeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEE-ccCCCc-----ccccccEEEEEEecCCC
Q psy12356 48 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVD-IKPTNM-----EELNEVITAAEFHPIDC 121 (400)
Q Consensus 48 ~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd-~~~~~~-----~~~~~~V~sv~f~p~~~ 121 (400)
+++.+.||... |++...-|-++ -+++.+.|.++|||- .+.++. ......++++++++..
T Consensus 16 ll~~~eG~~d~------------vn~~~l~~~e~--gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~- 80 (404)
T KOG1409|consen 16 LLSKIEGSQDD------------VNAAILIPKEE--GVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSES- 80 (404)
T ss_pred hhhhhcCchhh------------hhhheeccCCC--CeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccc-
Confidence 45666777643 56555666544 578889999999995 344542 1234568889998864
Q ss_pred CEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccccccc
Q psy12356 122 NLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALC 201 (400)
Q Consensus 122 ~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~ 201 (400)
..|..+-..|++.-+-+... +++ +
T Consensus 81 ~~L~vg~~ngtvtefs~sed-----fnk--------------------------------------------------m- 104 (404)
T KOG1409|consen 81 RRLYVGQDNGTVTEFALSED-----FNK--------------------------------------------------M- 104 (404)
T ss_pred eEEEEEEecceEEEEEhhhh-----hhh--------------------------------------------------c-
Confidence 45555555566544443221 000 0
Q ss_pred CcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCc
Q psy12356 202 DRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNIT 280 (400)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~ 280 (400)
...+. ...|...|..+.|+-.-+++++. -|+.+ .|-....+..+..|. +. + ..+
T Consensus 105 -~~~r~------------~~~h~~~v~~~if~~~~e~V~s~~~dk~~-~~hc~e~~~~lg~Y~---~~------~--~~t 159 (404)
T KOG1409|consen 105 -TFLKD------------YLAHQARVSAIVFSLTHEWVLSTGKDKQF-AWHCTESGNRLGGYN---FE------T--PAS 159 (404)
T ss_pred -chhhh------------hhhhhcceeeEEecCCceeEEEeccccce-EEEeeccCCcccceE---ee------c--cCC
Confidence 00011 12577889999999888888875 46655 454333333332221 10 0 000
Q ss_pred eeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEE
Q psy12356 281 ALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRIN 359 (400)
Q Consensus 281 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~ 359 (400)
.. .+ +. . ..+.+.|.+.|..+.+-+.+-.+.. -..||.+.|.+++|.|-.+.|.|+ .|..|.
T Consensus 160 ~~---~~---d~---~---~~fvGd~~gqvt~lr~~~~~~~~i~-----~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi 222 (404)
T KOG1409|consen 160 AL---QF---DA---L---YAFVGDHSGQITMLKLEQNGCQLIT-----TFNGHTGEVTCLKWDPGQRLLFSGASDHSVI 222 (404)
T ss_pred CC---ce---ee---E---EEEecccccceEEEEEeecCCceEE-----EEcCcccceEEEEEcCCCcEEEeccccCceE
Confidence 00 00 00 0 1234567888888888766522110 114899999999999999999997 699999
Q ss_pred EEeCcc
Q psy12356 360 LWHLEI 365 (400)
Q Consensus 360 lW~~~~ 365 (400)
+||+..
T Consensus 223 ~wdigg 228 (404)
T KOG1409|consen 223 MWDIGG 228 (404)
T ss_pred EEeccC
Confidence 999875
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.021 Score=56.00 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=67.4
Q ss_pred ECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEee
Q psy12356 11 RFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLST 89 (400)
Q Consensus 11 fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss 89 (400)
|++ +|+++|..|. |.+.|.+..++- .+ --+|. .+|.-.++.-+.+ .++.+.
T Consensus 327 fa~~~Gd~ia~VSR-GkaFi~~~~~~~-----------~i--qv~~~------------~~VrY~r~~~~~e--~~vigt 378 (668)
T COG4946 327 FAVVNGDYIALVSR-GKAFIMRPWDGY-----------SI--QVGKK------------GGVRYRRIQVDPE--GDVIGT 378 (668)
T ss_pred hccCCCcEEEEEec-CcEEEECCCCCe-----------eE--EcCCC------------CceEEEEEccCCc--ceEEec
Confidence 665 8999999984 567776654321 01 11222 2355555554443 566677
Q ss_pred CCC-eEEEEEccCCCccc---ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 90 NDQ-SFNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 90 ~D~-tI~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+|+ .+-|+|.++++++. --+.|-++..+|+| ..++.+-....|-+.|+.++
T Consensus 379 ~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dG-K~~vvaNdr~el~vididng 433 (668)
T COG4946 379 NDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDG-KKVVVANDRFELWVIDIDNG 433 (668)
T ss_pred cCCceEEEEecCCceEEEeeCCccceEEEEEcCCC-cEEEEEcCceEEEEEEecCC
Confidence 888 89999999988543 23578899999986 56666666667777787777
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00034 Score=70.04 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=56.8
Q ss_pred ccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCcc--cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 67 IEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNME--ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 67 ~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~--~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
....|.+++++|+.. +++.|+.||+|.+||...+... ...-..+.++|||+| .+|+.|+..|.+++||+.-.
T Consensus 258 L~s~v~~ca~sp~E~--kLvlGC~DgSiiLyD~~~~~t~~~ka~~~P~~iaWHp~g-ai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 258 LPSQVICCARSPSED--KLVLGCEDGSIILYDTTRGVTLLAKAEFIPTLIAWHPDG-AIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred cCCcceEEecCcccc--eEEEEecCCeEEEEEcCCCeeeeeeecccceEEEEcCCC-cEEEEEcCCceEEEEEeecC
Confidence 345688999999864 8888999999999998766421 112235789999986 68999999999999998765
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.036 Score=52.59 Aligned_cols=224 Identities=12% Similarity=0.097 Sum_probs=115.3
Q ss_pred EEEEECCCCCeEEEecC-CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 7 EASQRFSDGELLATGDK-GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
..|+++++|++|+++.- -|.|.++-+.+..... .+... ..|+...--.+ +....+-...+.|++ ++
T Consensus 92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~-------~~v~~-~~h~g~~p~~r--Q~~~h~H~a~~tP~~---~~ 158 (346)
T COG2706 92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQ-------PVVQV-VKHTGSGPHER--QESPHVHSANFTPDG---RY 158 (346)
T ss_pred eEEEECCCCCEEEEEEccCceEEEEEcccCCccc-------cceee-eecCCCCCCcc--ccCCccceeeeCCCC---CE
Confidence 46899999999999874 5899999987632110 01111 11221000000 001115567788887 45
Q ss_pred EEee--CCCeEEEEEccCCCcccc-------cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 86 LLST--NDQSFNIVDIKPTNMEEL-------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 86 l~ss--~D~tI~lWd~~~~~~~~~-------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
+.+. .--.|.+++++.|.+... ..-=+-+.|||+++--.+.+=.+++|-+|....... ++ ..+..+..
T Consensus 159 l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g--~~-~~lQ~i~t 235 (346)
T COG2706 159 LVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVG--KF-EELQTIDT 235 (346)
T ss_pred EEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCc--eE-EEeeeecc
Confidence 5432 233578999998875322 122467899998642223333499999999887410 00 11111110
Q ss_pred cceeceeccC-chhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 157 CNCQGLIVPE-SKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
. .. .+.. ...-.+.-++++ +..++.+....|-++-+...... ....+. ...+...-....|+|
T Consensus 236 l-P~--dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~---L~~~~~---------~~teg~~PR~F~i~~ 300 (346)
T COG2706 236 L-PE--DFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGK---LELVGI---------TPTEGQFPRDFNINP 300 (346)
T ss_pred C-cc--ccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCE---EEEEEE---------eccCCcCCccceeCC
Confidence 0 00 0000 000011223444 44566555667777766543211 011100 001112346788999
Q ss_pred CCcEEEEec--CCeEEEEeCCCCCCceee
Q psy12356 235 SGRYMISRD--YLCVKVWDLHMESRPVET 261 (400)
Q Consensus 235 dg~~las~~--D~tIklWD~~~~~~~l~~ 261 (400)
.|++|+.++ +.+|.++-.....-+|..
T Consensus 301 ~g~~Liaa~q~sd~i~vf~~d~~TG~L~~ 329 (346)
T COG2706 301 SGRFLIAANQKSDNITVFERDKETGRLTL 329 (346)
T ss_pred CCCEEEEEccCCCcEEEEEEcCCCceEEe
Confidence 999998653 467999877654334544
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00063 Score=68.17 Aligned_cols=72 Identities=13% Similarity=0.208 Sum_probs=55.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++++|+.+.|+.|..||+|.+||...+. ..+.-+. =.++.++|+|++.
T Consensus 260 s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~-------------t~~~ka~------------~~P~~iaWHp~ga-- 312 (545)
T PF11768_consen 260 SQVICCARSPSEDKLVLGCEDGSIILYDTTRGV-------------TLLAKAE------------FIPTLIAWHPDGA-- 312 (545)
T ss_pred CcceEEecCcccceEEEEecCCeEEEEEcCCCe-------------eeeeeec------------ccceEEEEcCCCc--
Confidence 468899999999999999999999999987532 1111111 1267899999874
Q ss_pred eEEEeeCCCeEEEEEccCC
Q psy12356 84 HFLLSTNDQSFNIVDIKPT 102 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~ 102 (400)
.+++++.-|.+.+||+.-+
T Consensus 313 i~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 313 IFVVGSEQGELQCFDMALS 331 (545)
T ss_pred EEEEEcCCceEEEEEeecC
Confidence 6677888899999998644
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0018 Score=58.75 Aligned_cols=90 Identities=19% Similarity=0.280 Sum_probs=63.0
Q ss_pred eEEEEEccCCC--ccc--ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCch
Q psy12356 93 SFNIVDIKPTN--MEE--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESK 168 (400)
Q Consensus 93 tI~lWd~~~~~--~~~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (400)
..+.|+++... +.. -...|.+++-||...++++.|+.||.+.+||+|.....
T Consensus 160 ~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p------------------------ 215 (319)
T KOG4714|consen 160 NFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMP------------------------ 215 (319)
T ss_pred ceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccch------------------------
Confidence 45677776543 111 11348888999987778888888999999998876110
Q ss_pred hhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC-CcEEE-EecCCe
Q psy12356 169 REERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS-GRYMI-SRDYLC 246 (400)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd-g~~la-s~~D~t 246 (400)
.+.+..|..+++.|-|+|. +..|. +++||.
T Consensus 216 ------------------------------------------------~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGs 247 (319)
T KOG4714|consen 216 ------------------------------------------------VSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGS 247 (319)
T ss_pred ------------------------------------------------HHHHHHhhhhhhheeccCCCchheeEecCCCc
Confidence 0112356678999999995 55555 578999
Q ss_pred EEEEeCCC
Q psy12356 247 VKVWDLHM 254 (400)
Q Consensus 247 IklWD~~~ 254 (400)
+--||..+
T Consensus 248 lw~wdas~ 255 (319)
T KOG4714|consen 248 LWHWDAST 255 (319)
T ss_pred EEEEcCCC
Confidence 99999985
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.005 Score=61.26 Aligned_cols=111 Identities=16% Similarity=0.167 Sum_probs=75.3
Q ss_pred eeEEEEEECCCCCeEEEe--cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSDGELLATG--DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~--s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
|-|+++.|+|+|+-.|.+ -+=.+|-|||+.. +++..|- ++.-+.+-|+|.++
T Consensus 271 GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~------------~~v~df~--------------egpRN~~~fnp~g~ 324 (566)
T KOG2315|consen 271 GPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG------------KPVFDFP--------------EGPRNTAFFNPHGN 324 (566)
T ss_pred CCceEEEECCCCCEEEEEEecccceEEEEcCCC------------CEeEeCC--------------CCCccceEECCCCC
Confidence 568999999999877664 4567899999863 2222221 12246788999874
Q ss_pred CceEEEeeC---CCeEEEEEccCCCc-ccc-cccEEEEEEecCCCCEEEEEeC------CCeEEEEecccccc
Q psy12356 82 QAHFLLSTN---DQSFNIVDIKPTNM-EEL-NEVITAAEFHPIDCNLFVYSSS------KGTIRLCDMRAAAL 143 (400)
Q Consensus 82 ~~~~l~ss~---D~tI~lWd~~~~~~-~~~-~~~V~sv~f~p~~~~~las~s~------Dg~i~lWD~~~~~~ 143 (400)
.++.++. -|.|-+||+.+.++ ... ...-+-++|+||| +.|+++.. |+.+|||+.....+
T Consensus 325 --ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~tt~~eW~PdG-e~flTATTaPRlrvdNg~KiwhytG~~l 394 (566)
T KOG2315|consen 325 --IILLAGFGNLPGDMEVWDVPNRKLIAKFKAANTTVFEWSPDG-EYFLTATTAPRLRVDNGIKIWHYTGSLL 394 (566)
T ss_pred --EEEEeecCCCCCceEEEeccchhhccccccCCceEEEEcCCC-cEEEEEeccccEEecCCeEEEEecCcee
Confidence 5555654 57999999987542 111 1223457899986 67777643 78999999876643
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0016 Score=64.52 Aligned_cols=194 Identities=15% Similarity=0.194 Sum_probs=103.2
Q ss_pred CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCe
Q psy12356 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQS 93 (400)
Q Consensus 14 dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~t 93 (400)
+.+-.+++|.|++|++|.+..... ..+...+--+++.|+ +.|+++.|..+- +.+ ++.|+-
T Consensus 746 NENSFiSASkDKTVKLWSik~EgD----~~~tsaCQfTY~aHk------------k~i~~igfL~~l---r~i-~ScD~g 805 (1034)
T KOG4190|consen 746 NENSFISASKDKTVKLWSIKPEGD----EIGTSACQFTYQAHK------------KPIHDIGFLADL---RSI-ASCDGG 805 (1034)
T ss_pred cccceeeccCCceEEEEEeccccC----ccccceeeeEhhhcc------------Ccccceeeeecc---cee-eeccCc
Confidence 456678999999999999864211 012222223667777 348889998753 333 345899
Q ss_pred EEEEEccCCCc-c------cc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceec
Q psy12356 94 FNIVDIKPTNM-E------EL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIV 164 (400)
Q Consensus 94 I~lWd~~~~~~-~------~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (400)
|.+||.=-|.. . .+ .+.|.++. +-+..-++|-++...|||++|.|.+.......-|-..+.+....-+
T Consensus 806 iHlWDPFigr~Laq~~dapk~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~i-- 882 (1034)
T KOG4190|consen 806 IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAI-- 882 (1034)
T ss_pred ceeecccccchhHhhhcCcccCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEE--
Confidence 99999754441 1 01 12344443 1122234455577899999999988542211111111111000001
Q ss_pred cCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-ec
Q psy12356 165 PESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-RD 243 (400)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~ 243 (400)
.-.+.+...+.+-..|.|-+-|.|+|... ..|. ++ ......++ -|..+.|++ .-
T Consensus 883 --------aVa~~GN~lAa~LSnGci~~LDaR~G~vI----Nswr--------pm----ecdllqla-apsdq~L~~sal 937 (1034)
T KOG4190|consen 883 --------AVADKGNKLAAALSNGCIAILDARNGKVI----NSWR--------PM----ECDLLQLA-APSDQALAQSAL 937 (1034)
T ss_pred --------EeccCcchhhHHhcCCcEEEEecCCCcee----ccCC--------cc----cchhhhhc-CchhHHHHhhcc
Confidence 11223333334446789999999987642 1121 10 00111111 255566764 45
Q ss_pred CCeEEE-EeCCCC
Q psy12356 244 YLCVKV-WDLHME 255 (400)
Q Consensus 244 D~tIkl-WD~~~~ 255 (400)
|.++-+ |-.-.+
T Consensus 938 dHslaVnWhaldg 950 (1034)
T KOG4190|consen 938 DHSLAVNWHALDG 950 (1034)
T ss_pred cceeEeeehhcCC
Confidence 788887 866554
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00045 Score=71.82 Aligned_cols=113 Identities=14% Similarity=0.075 Sum_probs=72.3
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
-+|++||-+-+.|+.|+..|.|+++++..+.. .....+|..+ |+.|.=+-++. ..
T Consensus 1104 fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~-----------e~s~ncH~Sa------------vT~vePs~dgs--~~ 1158 (1516)
T KOG1832|consen 1104 FTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSM-----------EESVNCHQSA------------VTLVEPSVDGS--TQ 1158 (1516)
T ss_pred eeeEEeecCCceEEeeeccceEEEEEccCccc-----------cccccccccc------------cccccccCCcc--ee
Confidence 47999999999999999999999999987641 1234567643 66666555553 55
Q ss_pred EE-eeC-CCeEEEEEccCCCccccc-ccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc
Q psy12356 86 LL-STN-DQSFNIVDIKPTNMEELN-EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC 144 (400)
Q Consensus 86 l~-ss~-D~tI~lWd~~~~~~~~~~-~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~ 144 (400)
++ ++. -.-..||++...--..|. ..-.+|.|+......++ |..-....++|+.++..+
T Consensus 1159 Ltsss~S~PlsaLW~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~-gt~~d~a~~YDvqT~~~l 1219 (1516)
T KOG1832|consen 1159 LTSSSSSSPLSALWDASSTGGPRHSFDEDKAVKFSNSLQFRAL-GTEADDALLYDVQTCSPL 1219 (1516)
T ss_pred eeeccccCchHHHhccccccCccccccccceeehhhhHHHHHh-cccccceEEEecccCcHH
Confidence 54 333 346789998652211121 23356778764323333 223345789999998543
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00064 Score=63.80 Aligned_cols=119 Identities=11% Similarity=0.139 Sum_probs=74.8
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|.++.|.-.+++|..|..+|.|.+.|+...- .|...+...|- |. ..|++++-...++ ..+
T Consensus 255 VfAlQf~~s~nLv~~GcRngeI~~iDLR~rn------qG~~~~a~rly-h~------------Ssvtslq~Lq~s~-q~L 314 (425)
T KOG2695|consen 255 VFALQFAGSDNLVFNGCRNGEIFVIDLRCRN------QGNGWCAQRLY-HD------------SSVTSLQILQFSQ-QKL 314 (425)
T ss_pred HHHHHhcccCCeeEecccCCcEEEEEeeecc------cCCCcceEEEE-cC------------cchhhhhhhcccc-ceE
Confidence 5567788889999999999999999987531 11111222222 32 2366666544222 145
Q ss_pred EEeeCCCeEEEEEccCCCc----ccccccEEEE-----EEecCCCCEEEEEeCCCeEEEEecccccccc
Q psy12356 86 LLSTNDQSFNIVDIKPTNM----EELNEVITAA-----EFHPIDCNLFVYSSSKGTIRLCDMRAAALCD 145 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv-----~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~ 145 (400)
++++.+|+|+|||++--++ ..-.+.|+.. -.++. ...+++++.|...|+|.++.+.++.
T Consensus 315 maS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~e-eg~I~s~GdDcytRiWsl~~ghLl~ 382 (425)
T KOG2695|consen 315 MASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEE-EGSIFSVGDDCYTRIWSLDSGHLLC 382 (425)
T ss_pred eeccCcCceeEeeehhhhcccceeeeecccccccccccccccc-cceEEEccCeeEEEEEecccCceee
Confidence 5567899999999864332 1111223222 23444 3467889999999999999996643
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.032 Score=52.71 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=27.4
Q ss_pred ccCeEEEEECCCCcEEEE-e-cCCeEEEEeCCCCC
Q psy12356 224 ISSISDVKISNSGRYMIS-R-DYLCVKVWDLHMES 256 (400)
Q Consensus 224 ~~~V~~v~fSpdg~~las-~-~D~tIklWD~~~~~ 256 (400)
.+.+-+|+|+++|.+++. + --+.+-+||..++.
T Consensus 216 ~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~ 250 (305)
T PF07433_consen 216 NGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGR 250 (305)
T ss_pred CCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCC
Confidence 367999999999998874 4 36899999999863
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.014 Score=64.02 Aligned_cols=186 Identities=19% Similarity=0.286 Sum_probs=104.7
Q ss_pred EEEEECCCCCeEEEecC---CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 7 EASQRFSDGELLATGDK---GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~---Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+++|-|.|++||+... ...|..|..++-+ .|++.. .+. +. +..|..++|++|+.
T Consensus 260 ~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLr------hgeF~l--~~~-~~-----------~~~v~~l~Wn~ds~-- 317 (928)
T PF04762_consen 260 GALSWRPSGNLIASSQRLPDRHDVVFFERNGLR------HGEFTL--RFD-PE-----------EEKVIELAWNSDSE-- 317 (928)
T ss_pred CCccCCCCCCEEEEEEEcCCCcEEEEEecCCcE------eeeEec--CCC-CC-----------CceeeEEEECCCCC--
Confidence 47899999999999864 4578888887532 122211 111 11 24589999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC--cc-cc----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN--ME-EL----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~--~~-~~----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.+++.-.|. |+||-+.+.. ++ ++ ...+..+.|||.....|.....+|.+...+..-..... ...
T Consensus 318 iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s---~~~----- 388 (928)
T PF04762_consen 318 ILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRS---PGS----- 388 (928)
T ss_pred EEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEec---CCC-----
Confidence 444444444 9999986653 11 11 22345599999888888888776777554433220000 000
Q ss_pred cceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
+ ....+. ++.+ ...+++-.++..-.. =++..+ . + .-...|.+++|+++
T Consensus 389 --------~--------~~D~g~vaVID---G~~lllTpf~~a~VP-PPMs~~---------~-l-~~~~~v~~vaf~~~ 437 (928)
T PF04762_consen 389 --------S--------PNDNGTVAVID---GNKLLLTPFRRAVVP-PPMSSY---------E-L-ELPSPVNDVAFSPS 437 (928)
T ss_pred --------C--------ccCceEEEEEe---CCeEEEecccccCCC-chHhce---------E-E-cCCCCcEEEEEeCC
Confidence 0 000111 1221 235555555432211 000000 0 1 22367999999999
Q ss_pred CcEEEE-ecCCeEEEEeCCC
Q psy12356 236 GRYMIS-RDYLCVKVWDLHM 254 (400)
Q Consensus 236 g~~las-~~D~tIklWD~~~ 254 (400)
+..+|. ..|++|.+|....
T Consensus 438 ~~~~avl~~d~~l~~~~~~~ 457 (928)
T PF04762_consen 438 NSRFAVLTSDGSLSIYEWDL 457 (928)
T ss_pred CCeEEEEECCCCEEEEEecC
Confidence 886665 6789999988544
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.00061 Score=61.67 Aligned_cols=70 Identities=16% Similarity=0.199 Sum_probs=56.8
Q ss_pred eeEEEEEeccCCceEEEeeCCCeEEEEEccCCCc-----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 71 INKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNM-----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~-----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
|.+++-+|..+ ..++.++.||.+-|||.+...+ +-|...++-|-|||..+.-|.++++||.+-.||..+.
T Consensus 182 v~~l~~hp~qq-~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~ 256 (319)
T KOG4714|consen 182 VTALCSHPAQQ-HLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTT 256 (319)
T ss_pred chhhhCCcccc-cEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCc
Confidence 77788787543 2444567899999999987753 4467789999999999889999999999999998754
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.00082 Score=67.78 Aligned_cols=199 Identities=14% Similarity=0.191 Sum_probs=109.6
Q ss_pred EEEEEECCCCC--eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 6 REASQRFSDGE--LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 6 v~~v~fspdG~--~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.||+.+.+.+ .||.|..+|.|-+-........ ..++ ..+|. ...++++|++- |.
T Consensus 59 ~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS------s~E~---tp~~a------------r~Ct~lAwneL--Dt 115 (783)
T KOG1008|consen 59 VKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS------SAEV---TPGYA------------RPCTSLAWNEL--DT 115 (783)
T ss_pred ceeehhhcCCchhhhhhccccCceEEeecCCcccc------ccee---ccccc------------ccccccccccc--cH
Confidence 45677665544 7889999999999876532110 0111 11222 23678899875 22
Q ss_pred eEEEee-----CCCeEEEEEccCCC--------ccc-ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccc
Q psy12356 84 HFLLST-----NDQSFNIVDIKPTN--------MEE-LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSK 149 (400)
Q Consensus 84 ~~l~ss-----~D~tI~lWd~~~~~--------~~~-~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~ 149 (400)
..|+++ .|..++|||+.++- +.. .....++++|--+ ..++.+|...+.++++|+|...... .
T Consensus 116 n~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd-~klvlaGm~sr~~~ifdlRqs~~~~---~ 191 (783)
T KOG1008|consen 116 NHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRD-TKLVLAGMTSRSVHIFDLRQSLDSV---S 191 (783)
T ss_pred HHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccC-cchhhcccccchhhhhhhhhhhhhh---h
Confidence 455543 47799999998762 111 1123567888754 4678888889999999998541000 0
Q ss_pred eeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEee-cccccccCcccccccCCCCCCCcccccccccCeE
Q psy12356 150 CLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCD-MRAAALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
.+.+ ...+++.+. ...++.+ ++ ..||.|.+|| .+..+ .+.+....... .-...+.
T Consensus 192 svnT---k~vqG~tVd-------p~~~nY~--cs-~~dg~iAiwD~~rnie---npl~~i~~~~N--------~~~~~l~ 247 (783)
T KOG1008|consen 192 SVNT---KYVQGITVD-------PFSPNYF--CS-NSDGDIAIWDTYRNIE---NPLQIILRNEN--------KKPKQLF 247 (783)
T ss_pred hhhh---hhcccceec-------CCCCCce--ec-cccCceeeccchhhhc---cHHHHHhhCCC--------Cccccee
Confidence 0100 011111111 0112222 22 3499999999 44322 22221110000 0012478
Q ss_pred EEEECCCCc-EEEE-e-cCCeEEEEeCCCC
Q psy12356 229 DVKISNSGR-YMIS-R-DYLCVKVWDLHME 255 (400)
Q Consensus 229 ~v~fSpdg~-~las-~-~D~tIklWD~~~~ 255 (400)
.++|.|-.. +|++ . +.++|+++|+..-
T Consensus 248 ~~aycPtrtglla~l~RdS~tIrlydi~~v 277 (783)
T KOG1008|consen 248 ALAYCPTRTGLLAVLSRDSITIRLYDICVV 277 (783)
T ss_pred eEEeccCCcchhhhhccCcceEEEeccccc
Confidence 999999643 3333 4 4599999998753
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0023 Score=38.75 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=25.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEE
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQ 31 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd 31 (400)
..|.++.|+|++.++++++.|+.|++|+
T Consensus 13 ~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 13 GPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred CceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3589999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.07 Score=52.14 Aligned_cols=175 Identities=11% Similarity=0.107 Sum_probs=104.7
Q ss_pred eeEEEEEECCCCCeEEEecC-CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDGELLATGDK-GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
++|.+++-|.||.+..|.+. |..++++|+++..... .++. .. + ...+.|.....+
T Consensus 54 ~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~Dmin--------miKL--~~------l--------Pg~a~wv~skGd 109 (558)
T KOG0882|consen 54 GVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMIN--------MIKL--VD------L--------PGFAEWVTSKGD 109 (558)
T ss_pred HHHHhhhccccceeEeeccCcccceeEEEeeccchhh--------hccc--cc------C--------CCceEEecCCCC
Confidence 45677888999999999887 9999999987532110 0100 00 0 111233221111
Q ss_pred --ceEEEe-eCCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 83 --AHFLLS-TNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 83 --~~~l~s-s~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
..++++ -.++.|.+.|-....+ +-|..+|..+.++|.+ ..++|....|.|.-|.....-+
T Consensus 110 ~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~-Ds~vSiD~~gmVEyWs~e~~~q---------- 178 (558)
T KOG0882|consen 110 KISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAG-DSAVSIDISGMVEYWSAEGPFQ---------- 178 (558)
T ss_pred eeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccc-cceeeccccceeEeecCCCccc----------
Confidence 134444 3578899998654432 2356789999999985 5677777789999999765200
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
+++ . . -.|.+..-. -.+..+ .--+...++.||
T Consensus 179 ----------fPr-----------~----------~-l~~~~K~eT------dLy~f~----------K~Kt~pts~Efs 210 (558)
T KOG0882|consen 179 ----------FPR-----------T----------N-LNFELKHET------DLYGFP----------KAKTEPTSFEFS 210 (558)
T ss_pred ----------Ccc-----------c----------c-ccccccccc------hhhccc----------ccccCccceEEc
Confidence 000 0 0 001111000 000000 111346789999
Q ss_pred CCCcEEEE-ecCCeEEEEeCCCCCCceeee
Q psy12356 234 NSGRYMIS-RDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 234 pdg~~las-~~D~tIklWD~~~~~~~l~~~ 262 (400)
|+|..+++ +.|..||+++++++. .++.+
T Consensus 211 p~g~qistl~~DrkVR~F~~KtGk-lvqei 239 (558)
T KOG0882|consen 211 PDGAQISTLNPDRKVRGFVFKTGK-LVQEI 239 (558)
T ss_pred cccCcccccCcccEEEEEEeccch-hhhhh
Confidence 99999997 578999999999874 45555
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.002 Score=67.16 Aligned_cols=157 Identities=15% Similarity=0.149 Sum_probs=93.2
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCcc----cccccEEEEEEecCCCCEEEEEeCCC-eEEEEecccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNME----ELNEVITAAEFHPIDCNLFVYSSSKG-TIRLCDMRAAAL 143 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~----~~~~~V~sv~f~p~~~~~las~s~Dg-~i~lWD~~~~~~ 143 (400)
+..++++|+-+. .++++++..|.|+++++.+|.+. .|.+.|+-+.-+-+|..+|.+++... ...+|++... .
T Consensus 1102 ~~fTc~afs~~~--~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~-~ 1178 (1516)
T KOG1832|consen 1102 ALFTCIAFSGGT--NHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASST-G 1178 (1516)
T ss_pred cceeeEEeecCC--ceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccc-c
Confidence 347899999764 38888999999999999999853 46778888888887644444444444 5689998763 1
Q ss_pred cccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccc
Q psy12356 144 CDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEI 223 (400)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 223 (400)
-.+|+. ..+.. ..|+. ....+++ |+......+||+.+...++.. |. +. .+.
T Consensus 1179 ~~~Hsf-----~ed~~--vkFsn--------~~q~r~~--gt~~d~a~~YDvqT~~~l~ty---lt-~~--------~~~ 1229 (1516)
T KOG1832|consen 1179 GPRHSF-----DEDKA--VKFSN--------SLQFRAL--GTEADDALLYDVQTCSPLQTY---LT-DT--------VTS 1229 (1516)
T ss_pred Cccccc-----cccce--eehhh--------hHHHHHh--cccccceEEEecccCcHHHHh---cC-cc--------hhh
Confidence 122211 00000 00100 0001122 223456789999986544321 11 10 112
Q ss_pred ccCeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeee
Q psy12356 224 ISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 224 ~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~ 262 (400)
+..-+.+.|||+.+++. +|| -|||++.. ..++.|
T Consensus 1230 ~y~~n~a~FsP~D~LIl--ndG--vLWDvR~~-~aIh~F 1263 (1516)
T KOG1832|consen 1230 SYSNNLAHFSPCDTLIL--NDG--VLWDVRIP-EAIHRF 1263 (1516)
T ss_pred hhhccccccCCCcceEe--eCc--eeeeeccH-HHHhhh
Confidence 23346788999998887 444 48999976 345444
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.003 Score=38.19 Aligned_cols=30 Identities=37% Similarity=0.532 Sum_probs=26.9
Q ss_pred ccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 333 AHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 333 gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
+|...|+++.|+|++++++++ .|+.+++|+
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 10 GHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred ecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 577889999999999999987 699999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.11 Score=41.51 Aligned_cols=99 Identities=16% Similarity=0.239 Sum_probs=57.4
Q ss_pred EEEEEECC---CC-CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 6 REASQRFS---DG-ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 6 v~~v~fsp---dG-~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
|+++++.. || +.|+.||.|..||||+=++ ++..+..+ ++|.++.-...+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e-------------~~~Ei~e~-------------~~v~~L~~~~~~- 54 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE-------------IVAEITET-------------DKVTSLCSLGGG- 54 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc-------------EEEEEecc-------------cceEEEEEcCCC-
Confidence 45555544 44 5888999999999999653 23334333 346666665543
Q ss_pred CceEEEeeCCCeEEEEEccCCCc--ccccccEEEEEEe---cCCCCEEEEEeCCCeEE
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTNM--EELNEVITAAEFH---PIDCNLFVYSSSKGTIR 134 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~~--~~~~~~V~sv~f~---p~~~~~las~s~Dg~i~ 134 (400)
+++.+-.+|||-+++-....- +. ...++++.+. .+|..-|++|=.+|.|-
T Consensus 55 --~F~Y~l~NGTVGvY~~~~RlWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 55 --RFAYALANGTVGVYDRSQRLWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred --EEEEEecCCEEEEEeCcceeeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 777777777776655322211 11 1224444433 33334578887787663
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.18 Score=55.01 Aligned_cols=196 Identities=12% Similarity=0.119 Sum_probs=109.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.++.|-.|++.|..+..+|.|.+-|..+.. .. ..|.. +.+|.+.+||||++
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~---------~e----ivg~v-----------d~GI~aaswS~Dee-- 122 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLE---------LE----IVGNV-----------DNGISAASWSPDEE-- 122 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccc---------ee----eeeec-----------cCceEEEeecCCCc--
Confidence 368889999999999999999999999876532 11 12221 35699999999974
Q ss_pred eEEEeeCCCeEEEEEc-----cCC----------------------Ccccc---------------------cccEEEEE
Q psy12356 84 HFLLSTNDQSFNIVDI-----KPT----------------------NMEEL---------------------NEVITAAE 115 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~-----~~~----------------------~~~~~---------------------~~~V~sv~ 115 (400)
.++...++.++-+-+- ... ++++- ...=++|+
T Consensus 123 ~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~Is 202 (1265)
T KOG1920|consen 123 LLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSIS 202 (1265)
T ss_pred EEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEE
Confidence 5555667677655321 000 01000 00113588
Q ss_pred EecCCCCEEEEE----eCC-CeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceee---cCCCC
Q psy12356 116 FHPIDCNLFVYS----SSK-GTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKE---DNRRK 187 (400)
Q Consensus 116 f~p~~~~~las~----s~D-g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d 187 (400)
|..|| ++||.. -.+ +.|++||-. +.+-.. +........+--| .|.+...+ ....|
T Consensus 203 WRgDg-~~fAVs~~~~~~~~RkirV~drE-g~Lns~-se~~~~l~~~LsW--------------kPsgs~iA~iq~~~sd 265 (1265)
T KOG1920|consen 203 WRGDG-EYFAVSFVESETGTRKIRVYDRE-GALNST-SEPVEGLQHSLSW--------------KPSGSLIAAIQCKTSD 265 (1265)
T ss_pred EccCC-cEEEEEEEeccCCceeEEEeccc-chhhcc-cCcccccccceee--------------cCCCCeEeeeeecCCC
Confidence 98875 677773 235 799999976 432110 0001011001111 12222211 12345
Q ss_pred CeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE---ec-CCeEEEEeCCCC
Q psy12356 188 PAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS---RD-YLCVKVWDLHME 255 (400)
Q Consensus 188 g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las---~~-D~tIklWD~~~~ 255 (400)
+.|.++.-+.-.. ..|..| +.....+|..++|+.++.+||. .. ...|++|-+.+-
T Consensus 266 ~~IvffErNGL~h-----g~f~l~--------~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 266 SDIVFFERNGLRH-----GEFVLP--------FPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred CcEEEEecCCccc-----cccccC--------CcccccchheeeecCCCCceeeeecccccceEEEEEecCe
Confidence 5777776442110 111111 1122245899999999999985 22 345999998864
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.37 Score=50.85 Aligned_cols=101 Identities=21% Similarity=0.282 Sum_probs=62.2
Q ss_pred EECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEe-
Q psy12356 10 QRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLS- 88 (400)
Q Consensus 10 ~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~s- 88 (400)
.|++.+..+|-|+.+|.|.+.+.. .+.++.|++|... .|..+ |.-+. ..+|++
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s------------~~~~~~fqa~~~s-----------iv~~L-~~~~~--~~~L~sv 83 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSS------------FQLIRGFQAYEQS-----------IVQFL-YILNK--QNFLFSV 83 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccc------------ceeeehheecchh-----------hhhHh-hcccC--ceEEEEE
Confidence 368999999999999999888753 3345667777532 12222 22222 134433
Q ss_pred eCC-C----eEEEEEccCCC------c-ccc----------cccEEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy12356 89 TND-Q----SFNIVDIKPTN------M-EEL----------NEVITAAEFHPIDCNLFVYSSSKGTIRLCD 137 (400)
Q Consensus 89 s~D-~----tI~lWd~~~~~------~-~~~----------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD 137 (400)
+.| + .++|||++.-+ + ..| ..++.+++.|.+ -+.+|.|-.||.|-...
T Consensus 84 ~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~-l~~Iv~Gf~nG~V~~~~ 153 (933)
T KOG2114|consen 84 GEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSED-LKTIVCGFTNGLVICYK 153 (933)
T ss_pred eecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEcc-ccEEEEEecCcEEEEEc
Confidence 333 2 69999996431 1 011 235677888876 46788888888876543
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.2 Score=48.40 Aligned_cols=73 Identities=15% Similarity=0.213 Sum_probs=55.2
Q ss_pred eEEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|..++|||..+ +|..++.+.+|+|.|+.+. .+...+..|. .+.+++|--+. .
T Consensus 195 ~IrdlafSp~~~GLl~~asl~nkiki~dlet~-----------~~vssy~a~~-------------~~wSC~wDlde--~ 248 (463)
T KOG1645|consen 195 FIRDLAFSPFNEGLLGLASLGNKIKIMDLETS-----------CVVSSYIAYN-------------QIWSCCWDLDE--R 248 (463)
T ss_pred hhhhhccCccccceeeeeccCceEEEEecccc-----------eeeeheeccC-------------CceeeeeccCC--c
Confidence 578999999887 8889999999999999853 1233444553 37889998765 3
Q ss_pred eEEEe-eCCCeEEEEEccCCC
Q psy12356 84 HFLLS-TNDQSFNIVDIKPTN 103 (400)
Q Consensus 84 ~~l~s-s~D~tI~lWd~~~~~ 103 (400)
+++-+ -..|.|.|+|++..+
T Consensus 249 h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 249 HVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred ceeEEeccCceEEEEEccCCC
Confidence 66655 468999999997543
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.045 Score=56.94 Aligned_cols=100 Identities=17% Similarity=0.260 Sum_probs=67.5
Q ss_pred CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec--cC-CceEEEeeC
Q psy12356 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR--KN-QAHFLLSTN 90 (400)
Q Consensus 14 dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~--~~-~~~~l~ss~ 90 (400)
+|.++||||.||+|.|-.+.+.+. .....|+ ..+++|+++|+ -+ ..++++++.
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~---------~~~~df~---------------rpiksial~Pd~~~~~sk~fv~GG~ 137 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDE---------ITQYDFK---------------RPIKSIALHPDFSRQQSKQFVSGGM 137 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCcc---------ceeEecC---------------CcceeEEeccchhhhhhhheeecCc
Confidence 699999999999999998876431 1111121 34789999998 22 346667666
Q ss_pred CCeEEEEEcc--CC----CcccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 91 DQSFNIVDIK--PT----NMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 91 D~tI~lWd~~--~~----~~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
-| +-|..-. .. .+....+.|.++.|+. +++|-++.+| |+++|+.++.
T Consensus 138 ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~g---~lIAWand~G-v~vyd~~~~~ 190 (846)
T KOG2066|consen 138 AG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWRG---NLIAWANDDG-VKVYDTPTRQ 190 (846)
T ss_pred ce-EEEehhhhhcCccceeeecCccceEEEEecC---cEEEEecCCC-cEEEeccccc
Confidence 56 5554321 00 0122347899999974 6889988888 8999998874
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.066 Score=52.04 Aligned_cols=120 Identities=14% Similarity=0.138 Sum_probs=72.0
Q ss_pred ECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE-e
Q psy12356 11 RFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL-S 88 (400)
Q Consensus 11 fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~-s 88 (400)
|++ ||+++..... |+|.+-|+.+.... ..+....+.....+ ..-..+++.-++++|++. ++.+ .
T Consensus 201 ~~~~dg~~~~vs~e-G~V~~id~~~~~~~------~~~~~~~~~~~~~~-----~~wrP~g~q~ia~~~dg~--~lyV~~ 266 (352)
T TIGR02658 201 YSNKSGRLVWPTYT-GKIFQIDLSSGDAK------FLPAIEAFTEAEKA-----DGWRPGGWQQVAYHRARD--RIYLLA 266 (352)
T ss_pred eEcCCCcEEEEecC-CeEEEEecCCCcce------ecceeeeccccccc-----cccCCCcceeEEEcCCCC--EEEEEe
Confidence 455 8888876665 99999997653210 01111111111000 000112344589999874 4444 3
Q ss_pred -eCC--------CeEEEEEccCCCcc---cccccEEEEEEecCCC-CEEEEEeCCCeEEEEeccccccc
Q psy12356 89 -TND--------QSFNIVDIKPTNME---ELNEVITAAEFHPIDC-NLFVYSSSKGTIRLCDMRAAALC 144 (400)
Q Consensus 89 -s~D--------~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~-~~las~s~Dg~i~lWD~~~~~~~ 144 (400)
... +.|.++|.++++.. .....+.+++|+||+. .++++...++.|.+.|+.+++.+
T Consensus 267 ~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i 335 (352)
T TIGR02658 267 DQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKEL 335 (352)
T ss_pred cCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEE
Confidence 222 58999999888732 2345788999999975 44445556899999999998543
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=96.13 E-value=1.1 Score=41.15 Aligned_cols=70 Identities=19% Similarity=0.200 Sum_probs=43.2
Q ss_pred ceeeEEEEEeccCCceEEEeeCC--------CeEEEEEccCCCcccc---cccEEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTND--------QSFNIVDIKPTNMEEL---NEVITAAEFHPIDCNLFVYSSSKGTIRLCD 137 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D--------~tI~lWd~~~~~~~~~---~~~V~sv~f~p~~~~~las~s~Dg~i~lWD 137 (400)
...+.+++.|+++ .+++.... +.|..++.. ++.... ...-+.++|+|++..++++-+..+.|..+|
T Consensus 86 ~~~ND~~vd~~G~--ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~ 162 (246)
T PF08450_consen 86 NRPNDVAVDPDGN--LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFD 162 (246)
T ss_dssp EEEEEEEE-TTS---EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEE
T ss_pred CCCceEEEcCCCC--EEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccccceeEEEe
Confidence 3478999998873 45543322 334444444 332211 234589999998755667777789999999
Q ss_pred cccc
Q psy12356 138 MRAA 141 (400)
Q Consensus 138 ~~~~ 141 (400)
+...
T Consensus 163 ~~~~ 166 (246)
T PF08450_consen 163 LDAD 166 (246)
T ss_dssp EETT
T ss_pred cccc
Confidence 8754
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.062 Score=53.77 Aligned_cols=104 Identities=15% Similarity=0.275 Sum_probs=65.9
Q ss_pred EEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE
Q psy12356 7 EASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL 86 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l 86 (400)
+-|.|||-|.||+|--.-| |.+|.=.. +..++.| .|. .|.-+.|||.. ++|
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~-----------f~r~~RF-~Hp-------------~Vq~idfSP~E---kYL 264 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGES-----------FDRIQRF-YHP-------------GVQFIDFSPNE---KYL 264 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCcc-----------HHHHHhc-cCC-------------CceeeecCCcc---ceE
Confidence 5689999999999987555 88997543 2223444 343 37778999986 444
Q ss_pred Ee-e-----C------CCeEEEEEccCCCcc-cc---cc--cE-EEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 87 LS-T-----N------DQSFNIVDIKPTNME-EL---NE--VI-TAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 87 ~s-s-----~------D~tI~lWd~~~~~~~-~~---~~--~V-~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
++ | . ...+.|||+.+|.+. .. .+ .+ .-+.||-|+ .++|--.. .+|.|++.-+-
T Consensus 265 VT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~Dd-Ky~Arm~~-~sisIyEtpsf 336 (698)
T KOG2314|consen 265 VTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDD-KYFARMTG-NSISIYETPSF 336 (698)
T ss_pred EEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCC-ceeEEecc-ceEEEEecCce
Confidence 42 2 1 147999999999742 11 11 12 235678775 56665444 56777776543
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.015 Score=38.96 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=29.1
Q ss_pred ceeeEEEEEECCCCCeEEEecCCCeEEEEEcC
Q psy12356 2 LVYMREASQRFSDGELLATGDKGGRVVIFQRD 33 (400)
Q Consensus 2 ~~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~ 33 (400)
+...|.+++|+|..++||.|..||.|.|+.++
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 34578999999999999999999999999985
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.18 Score=50.74 Aligned_cols=29 Identities=10% Similarity=0.134 Sum_probs=19.8
Q ss_pred CeEEEEECCCCcEEEEecCCeEEEEeCCC
Q psy12356 226 SISDVKISNSGRYMISRDYLCVKVWDLHM 254 (400)
Q Consensus 226 ~V~~v~fSpdg~~las~~D~tIklWD~~~ 254 (400)
.|..|.||++|+++|-..+.++.|.+...
T Consensus 146 ~vk~V~Ws~~g~~val~t~~~i~il~~~~ 174 (443)
T PF04053_consen 146 AVKYVIWSDDGELVALVTKDSIYILKYNL 174 (443)
T ss_dssp E-EEEEE-TTSSEEEEE-S-SEEEEEE-H
T ss_pred CCcEEEEECCCCEEEEEeCCeEEEEEecc
Confidence 47889999999999866666888887653
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.41 Score=38.22 Aligned_cols=65 Identities=14% Similarity=0.234 Sum_probs=43.7
Q ss_pred eeEEEEEeccCC--ceEEEeeCCCeEEEEEccCCCccc--ccccEEEEEEecCCCCEEEEEeCCCeEEEEec
Q psy12356 71 INKIRWLRRKNQ--AHFLLSTNDQSFNIVDIKPTNMEE--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDM 138 (400)
Q Consensus 71 V~~v~~sp~~~~--~~~l~ss~D~tI~lWd~~~~~~~~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~ 138 (400)
|+++++.....+ ..++++|.|..||+++=+.- ..+ -++.|+++.-.+ ...|+++..+|||.+++-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~-~~Ei~e~~~v~~L~~~~--~~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEI-VAEITETDKVTSLCSLG--GGRFAYALANGTVGVYDR 70 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcE-EEEEecccceEEEEEcC--CCEEEEEecCCEEEEEeC
Confidence 556666552222 57889999999999984321 111 234566766555 367999999999998873
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.044 Score=56.84 Aligned_cols=111 Identities=14% Similarity=0.306 Sum_probs=76.4
Q ss_pred EEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc------
Q psy12356 7 EASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK------ 80 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~------ 80 (400)
.++.|+|.| +||-|+. ..|.|-|... ++.++++..|.+. |+.|+|.|-.
T Consensus 19 ~A~Dw~~~G-LiAygsh-slV~VVDs~s-----------~q~iqsie~h~s~------------V~~VrWap~~~p~~ll 73 (1062)
T KOG1912|consen 19 NAADWSPSG-LIAYGSH-SLVSVVDSRS-----------LQLIQSIELHQSA------------VTSVRWAPAPSPRDLL 73 (1062)
T ss_pred cccccCccc-eEEEecC-ceEEEEehhh-----------hhhhhccccCccc------------eeEEEeccCCCchhcc
Confidence 468899988 7888874 4688888763 3456677778754 9999998752
Q ss_pred --CCceEE-E-eeCCCeEEEEEccCCC----cccccccEEEEEEecC---CCCEEEEEeCCCeEEEEeccccc
Q psy12356 81 --NQAHFL-L-STNDQSFNIVDIKPTN----MEELNEVITAAEFHPI---DCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 81 --~~~~~l-~-ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~---~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
+..+++ + +-..|.|.|||...+. +..+...+-.++|-|. ....++.-....+|.+|+..+|.
T Consensus 74 S~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~ 146 (1062)
T KOG1912|consen 74 SPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGE 146 (1062)
T ss_pred CccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCc
Confidence 111222 3 3347999999998765 3455666767776543 22456666777899999999984
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.18 Score=50.67 Aligned_cols=119 Identities=13% Similarity=0.231 Sum_probs=68.7
Q ss_pred eEEEEEeccCCceEEEeeCCCeEEEEEccCCC-cccc-cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccc
Q psy12356 72 NKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN-MEEL-NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSK 149 (400)
Q Consensus 72 ~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~-~~~~-~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~ 149 (400)
+-++|||-| .+|++-.-.=|.||-=.+-. ++.. ...|.-+.|||. .++|+|-|.--.+.=||
T Consensus 214 tyv~wSP~G---TYL~t~Hk~GI~lWGG~~f~r~~RF~Hp~Vq~idfSP~-EkYLVT~s~~p~~~~~~------------ 277 (698)
T KOG2314|consen 214 TYVRWSPKG---TYLVTFHKQGIALWGGESFDRIQRFYHPGVQFIDFSPN-EKYLVTYSPEPIIVEED------------ 277 (698)
T ss_pred eeEEecCCc---eEEEEEeccceeeecCccHHHHHhccCCCceeeecCCc-cceEEEecCCccccCcc------------
Confidence 457898876 67776666668888532211 2111 134677889997 46777765432222222
Q ss_pred eeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe-E
Q psy12356 150 CLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI-S 228 (400)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V-~ 228 (400)
.+....+.|||+++|... +.|..+..+ ..+ .
T Consensus 278 ----------------------------------d~e~~~l~IWDI~tG~lk----rsF~~~~~~----------~~~WP 309 (698)
T KOG2314|consen 278 ----------------------------------DNEGQQLIIWDIATGLLK----RSFPVIKSP----------YLKWP 309 (698)
T ss_pred ----------------------------------cCCCceEEEEEccccchh----cceeccCCC----------ccccc
Confidence 112346788888877542 222211100 111 2
Q ss_pred EEEECCCCcEEEEecCCeEEEEeCCC
Q psy12356 229 DVKISNSGRYMISRDYLCVKVWDLHM 254 (400)
Q Consensus 229 ~v~fSpdg~~las~~D~tIklWD~~~ 254 (400)
=..||.|++++|--.-.+|-|++...
T Consensus 310 ~frWS~DdKy~Arm~~~sisIyEtps 335 (698)
T KOG2314|consen 310 IFRWSHDDKYFARMTGNSISIYETPS 335 (698)
T ss_pred eEEeccCCceeEEeccceEEEEecCc
Confidence 27899999999954336788887764
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=95.74 E-value=1.6 Score=39.99 Aligned_cols=195 Identities=13% Similarity=0.084 Sum_probs=107.9
Q ss_pred EEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE-eccCCceE
Q psy12356 8 ASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL-RRKNQAHF 85 (400)
Q Consensus 8 ~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s-p~~~~~~~ 85 (400)
++.|.+ +|.++++--..+.|..|+..++. ...+... ....+++. ++ +.+
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~------------~~~~~~~--------------~~~G~~~~~~~---g~l 54 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGE------------VEVIDLP--------------GPNGMAFDRPD---GRL 54 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTE------------EEEEESS--------------SEEEEEEECTT---SEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCe------------EEEEecC--------------CCceEEEEccC---CEE
Confidence 577888 88888887789999999987532 1112111 14556676 44 367
Q ss_pred EEeeCCCeEEEEEccCCCccc---------ccccEEEEEEecCCCCEEEEEeCC--------CeEEEEeccccccccccc
Q psy12356 86 LLSTNDQSFNIVDIKPTNMEE---------LNEVITAAEFHPIDCNLFVYSSSK--------GTIRLCDMRAAALCDRHS 148 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~~~---------~~~~V~sv~f~p~~~~~las~s~D--------g~i~lWD~~~~~~~~~~~ 148 (400)
+++..++. .+.|+.+++.+. .....+.+++.|+| +++++.... |.|..++.. ++...
T Consensus 55 ~v~~~~~~-~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G-~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~--- 128 (246)
T PF08450_consen 55 YVADSGGI-AVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDG-NLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV--- 128 (246)
T ss_dssp EEEETTCE-EEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEE---
T ss_pred EEEEcCce-EEEecCCCcEEEEeeccCCCcccCCCceEEEcCCC-CEEEEecCCCccccccccceEEECCC-CeEEE---
Confidence 77665444 555988876321 12347899999985 677776654 345555655 32110
Q ss_pred ceeccCcccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccc-cCcccccccCCCCCCCcccccccccC
Q psy12356 149 KCLIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAAL-CDRHSKFFEEPEDPTNKSFFSEIISS 226 (400)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~ 226 (400)
....+ ... +++...+++. ...+.+..+.|..+|+..... ... .+.+.. +.+-.+.
T Consensus 129 -~~~~~--~~p----------NGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~-~~~~~~---------~~~~~g~ 185 (246)
T PF08450_consen 129 -VADGL--GFP----------NGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSN-RRVFID---------FPGGPGY 185 (246)
T ss_dssp -EEEEE--SSE----------EEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEE-EEEEEE----------SSSSCE
T ss_pred -EecCc--ccc----------cceEECCcchheeecccccceeEEEeccccccceee-eeeEEE---------cCCCCcC
Confidence 00000 011 2223335543 344556678888888864321 110 111110 0011123
Q ss_pred eEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 227 ISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 227 V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
...+++.++|++.++. ..+.|.++|.+ + ..+..+
T Consensus 186 pDG~~vD~~G~l~va~~~~~~I~~~~p~-G-~~~~~i 220 (246)
T PF08450_consen 186 PDGLAVDSDGNLWVADWGGGRIVVFDPD-G-KLLREI 220 (246)
T ss_dssp EEEEEEBTTS-EEEEEETTTEEEEEETT-S-CEEEEE
T ss_pred CCcceEcCCCCEEEEEcCCCEEEEECCC-c-cEEEEE
Confidence 6789999999988764 56889999887 3 344444
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.97 Score=49.60 Aligned_cols=66 Identities=20% Similarity=0.343 Sum_probs=50.2
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCD 137 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD 137 (400)
..|.++.|..+.+ .++++..+|.|-+-|.++..+. .....|.+++|+||. ++++-...++++-+-+
T Consensus 69 ~~i~s~~fl~d~~--~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~De-e~l~liT~~~tll~mT 137 (1265)
T KOG1920|consen 69 DEIVSVQFLADTN--SICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDE-ELLALITGRQTLLFMT 137 (1265)
T ss_pred cceEEEEEecccc--eEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCC-cEEEEEeCCcEEEEEe
Confidence 3588899988765 7888888899999988877643 234568999999985 7888887877775533
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.11 Score=55.04 Aligned_cols=99 Identities=17% Similarity=0.287 Sum_probs=61.4
Q ss_pred CCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEee---
Q psy12356 13 SDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLST--- 89 (400)
Q Consensus 13 pdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss--- 89 (400)
.+++++.+|+..|+|-|-|... ++.+++|..|+.. |.+... .| +.+++++
T Consensus 185 ~Nnr~lf~G~t~G~V~LrD~~s-----------~~~iht~~aHs~s------------iSDfDv--~G--NlLitCG~S~ 237 (1118)
T KOG1275|consen 185 YNNRNLFCGDTRGTVFLRDPNS-----------FETIHTFDAHSGS------------ISDFDV--QG--NLLITCGYSM 237 (1118)
T ss_pred ecCcEEEeecccceEEeecCCc-----------Cceeeeeeccccc------------eeeeec--cC--CeEEEeeccc
Confidence 4678999999999999999874 4567889999853 333322 23 3666654
Q ss_pred ------CCCeEEEEEccCCC-ccccccc--EEEEEEecCCCCEEEEEeCCCeEEEEec
Q psy12356 90 ------NDQSFNIVDIKPTN-MEELNEV--ITAAEFHPIDCNLFVYSSSKGTIRLCDM 138 (400)
Q Consensus 90 ------~D~tI~lWd~~~~~-~~~~~~~--V~sv~f~p~~~~~las~s~Dg~i~lWD~ 138 (400)
-|.-|++||++.-+ +....-. -.-+.|+|.=..++|.+|..|...+-|.
T Consensus 238 R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~ 295 (1118)
T KOG1275|consen 238 RRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDT 295 (1118)
T ss_pred ccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccc
Confidence 25567888876432 1111100 0235677765556677777777666553
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.066 Score=55.11 Aligned_cols=114 Identities=11% Similarity=0.160 Sum_probs=73.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|..|-|+-..+.|-|.+.+|.|.||-+-++. -..+++. .-. + .-|.+++|+.||.
T Consensus 72 ~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgs-------W~EEMiN----nRn-----K-----SvV~SmsWn~dG~-- 128 (1189)
T KOG2041|consen 72 ASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGS-------WCEEMIN----NRN-----K-----SVVVSMSWNLDGT-- 128 (1189)
T ss_pred ceEEEEEeccccccccccCCCceEEEEeeeccc-------HHHHHhh----CcC-----c-----cEEEEEEEcCCCc--
Confidence 468889999999999999999999999987643 1111111 000 0 2377899998874
Q ss_pred eEEEeeCCCeEEEEEccCCCc--cccc-ccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM--EELN-EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~--~~~~-~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
++...-.||.|.+=.++.+.+ +++. .....+.|+||. ..++.+-.+|.+.++|....
T Consensus 129 kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~-~~~Lf~~ange~hlydnqgn 188 (1189)
T KOG2041|consen 129 KICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDL-EQALFKKANGETHLYDNQGN 188 (1189)
T ss_pred EEEEEEccCCEEEEeeccceecchhcchheccceeecccH-HHHHhhhcCCcEEEeccccc
Confidence 444444555554433333221 1121 123578899985 56677788999999998765
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=95.24 E-value=1.1 Score=47.23 Aligned_cols=84 Identities=17% Similarity=0.186 Sum_probs=56.6
Q ss_pred CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeE
Q psy12356 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSF 94 (400)
Q Consensus 15 G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI 94 (400)
++.+|-|..+|.|++.+.+.. + ++...|.+. +..+..++++|.||+|
T Consensus 49 ~~~~~~GtH~g~v~~~~~~~~------------~-~~~~~~s~~--------------------~~~Gey~asCS~DGkv 95 (846)
T KOG2066|consen 49 DKFFALGTHRGAVYLTTCQGN------------P-KTNFDHSSS--------------------ILEGEYVASCSDDGKV 95 (846)
T ss_pred cceeeeccccceEEEEecCCc------------c-ccccccccc--------------------ccCCceEEEecCCCcE
Confidence 578999999999999998742 1 122234321 2223467788999999
Q ss_pred EEEEccCCCc---ccccccEEEEEEecC----CCCEEEEEeCCC
Q psy12356 95 NIVDIKPTNM---EELNEVITAAEFHPI----DCNLFVYSSSKG 131 (400)
Q Consensus 95 ~lWd~~~~~~---~~~~~~V~sv~f~p~----~~~~las~s~Dg 131 (400)
.|--+-+.+. .....++.+|+++|+ ....|++|+.-|
T Consensus 96 ~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag 139 (846)
T KOG2066|consen 96 VIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG 139 (846)
T ss_pred EEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcce
Confidence 9987765542 223567899999997 234677777766
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.9 Score=47.16 Aligned_cols=27 Identities=7% Similarity=0.127 Sum_probs=21.4
Q ss_pred EEEEECCCCcEEEEe-cCCeEEEEeCCC
Q psy12356 228 SDVKISNSGRYMISR-DYLCVKVWDLHM 254 (400)
Q Consensus 228 ~~v~fSpdg~~las~-~D~tIklWD~~~ 254 (400)
...+|.++|+...|- -|..|-.||+..
T Consensus 378 LHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 378 LHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred ceEEECCCCCEEEeEeecceeEEEehHH
Confidence 468999999855554 488899999985
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.07 E-value=3.6 Score=40.04 Aligned_cols=30 Identities=10% Similarity=0.041 Sum_probs=23.7
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCC
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPL 35 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~ 35 (400)
.+....|||||+.||-.. ++.|.+++..++
T Consensus 44 ~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~ 73 (353)
T PF00930_consen 44 KLQDAKWSPDGKYIAFVR-DNNLYLRDLATG 73 (353)
T ss_dssp TBSEEEE-SSSTEEEEEE-TTEEEEESSTTS
T ss_pred ccccceeecCCCeeEEEe-cCceEEEECCCC
Confidence 356789999999999886 678999987654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=94.98 E-value=2.3 Score=38.30 Aligned_cols=104 Identities=17% Similarity=0.199 Sum_probs=60.5
Q ss_pred CCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCC
Q psy12356 12 FSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTND 91 (400)
Q Consensus 12 spdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D 91 (400)
.+++++|.+++.++.+..||..+++ .+-.+..-.. +....... ++.+++.+.|
T Consensus 33 ~~~~~~v~~~~~~~~l~~~d~~tG~-----------~~W~~~~~~~-------------~~~~~~~~---~~~v~v~~~~ 85 (238)
T PF13360_consen 33 VPDGGRVYVASGDGNLYALDAKTGK-----------VLWRFDLPGP-------------ISGAPVVD---GGRVYVGTSD 85 (238)
T ss_dssp EEETTEEEEEETTSEEEEEETTTSE-----------EEEEEECSSC-------------GGSGEEEE---TTEEEEEETT
T ss_pred EEeCCEEEEEcCCCEEEEEECCCCC-----------EEEEeecccc-------------ccceeeec---ccccccccce
Confidence 3467777777899999999987642 1112221110 00001111 2367777778
Q ss_pred CeEEEEEccCCCcc-c--c-----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 92 QSFNIVDIKPTNME-E--L-----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 92 ~tI~lWd~~~~~~~-~--~-----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
+.++.+|.++|+.. . . ............+ +.++.+..++.|..+|+++|++
T Consensus 86 ~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~~~d~~tG~~ 144 (238)
T PF13360_consen 86 GSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDG-DRLYVGTSSGKLVALDPKTGKL 144 (238)
T ss_dssp SEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEET-TEEEEEETCSEEEEEETTTTEE
T ss_pred eeeEecccCCcceeeeeccccccccccccccCceEec-CEEEEEeccCcEEEEecCCCcE
Confidence 89999998888731 1 0 0111222222223 5677777799999999999965
|
... |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.39 Score=50.22 Aligned_cols=110 Identities=16% Similarity=0.321 Sum_probs=68.2
Q ss_pred eEEEEEECCC------------CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceee
Q psy12356 5 MREASQRFSD------------GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN 72 (400)
Q Consensus 5 ~v~~v~fspd------------G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~ 72 (400)
.|+.|+|.|- --+||+++..|+|.|||..... ....|+.|. +.|.
T Consensus 57 ~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s-----------~~~~l~~~~------------~~~q 113 (1062)
T KOG1912|consen 57 AVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLAS-----------VINWLSHSN------------DSVQ 113 (1062)
T ss_pred ceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhh-----------hhhhhcCCC------------cchh
Confidence 4677777663 2378999999999999987431 122344444 3477
Q ss_pred EEEEEeccCCc-eEEE-eeCCCeEEEEEccCCCc-ccc--c-ccEEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy12356 73 KIRWLRRKNQA-HFLL-STNDQSFNIVDIKPTNM-EEL--N-EVITAAEFHPIDCNLFVYSSSKGTIRLCD 137 (400)
Q Consensus 73 ~v~~sp~~~~~-~~l~-ss~D~tI~lWd~~~~~~-~~~--~-~~V~sv~f~p~~~~~las~s~Dg~i~lWD 137 (400)
.++|-|...+. .++. -..-.++-||+.++|+. -.+ . ....++.|.|-+..-|..-+..|.+-+-+
T Consensus 114 dl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~ 184 (1062)
T KOG1912|consen 114 DLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCK 184 (1062)
T ss_pred heeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEe
Confidence 88888765443 3444 35678999999999873 111 1 23455777776644444444445444433
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.073 Score=55.82 Aligned_cols=103 Identities=14% Similarity=0.198 Sum_probs=68.7
Q ss_pred EEEEeccCCceEEEee----CCCeEEEEEccCCCcccc-c--ccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccc
Q psy12356 74 IRWLRRKNQAHFLLST----NDQSFNIVDIKPTNMEEL-N--EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146 (400)
Q Consensus 74 v~~sp~~~~~~~l~ss----~D~tI~lWd~~~~~~~~~-~--~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~ 146 (400)
..|+|..+ .+++++ ..|+|.|+- ++|+.+.+ . -.+++++|||. .-.|+.+=.-|.+.+|...+.+..
T Consensus 21 ~SWHPseP--lfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~hatSLCWHpe-~~vLa~gwe~g~~~v~~~~~~e~h-- 94 (1416)
T KOG3617|consen 21 SSWHPSEP--LFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVHATSLCWHPE-EFVLAQGWEMGVSDVQKTNTTETH-- 94 (1416)
T ss_pred cccCCCCc--eeEEEEecCCCCceEEEEe-cCCCCCcccccceehhhhccChH-HHHHhhccccceeEEEecCCceee--
Confidence 45888776 566553 467888874 45553322 2 23578999996 355666666777777776544110
Q ss_pred ccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccC
Q psy12356 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISS 226 (400)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 226 (400)
++...|..+
T Consensus 95 -----------------------------------------------------------------------tv~~th~a~ 103 (1416)
T KOG3617|consen 95 -----------------------------------------------------------------------TVVETHPAP 103 (1416)
T ss_pred -----------------------------------------------------------------------eeccCCCCC
Confidence 001146678
Q ss_pred eEEEEECCCCcEEEEecC-CeEEEEeCC
Q psy12356 227 ISDVKISNSGRYMISRDY-LCVKVWDLH 253 (400)
Q Consensus 227 V~~v~fSpdg~~las~~D-~tIklWD~~ 253 (400)
|..+.|||+|..|.+++. |.+.+|...
T Consensus 104 i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 104 IQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 999999999999999865 999999765
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=93.89 E-value=1.4 Score=46.16 Aligned_cols=97 Identities=5% Similarity=0.002 Sum_probs=53.0
Q ss_pred eEEEEEECCCCCeEEEec------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 5 MREASQRFSDGELLATGD------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
.+.+.++||||+.+|..- .|+.-.||=...+. ..+.+ ..+. ....-.|+|
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg--------~~~~l--t~g~--------------~~t~PsWsp 406 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG--------VAVQV--LEGH--------------SLTRPSWSL 406 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC--------cceee--ecCC--------------CCCCceECC
Confidence 467889999999998765 24444444332211 11111 1121 133456888
Q ss_pred ccCCceEEEee------------CCCeEEEEEccCCCcc-cccccEEEEEEecCCCCEEEEEe
Q psy12356 79 RKNQAHFLLST------------NDQSFNIVDIKPTNME-ELNEVITAAEFHPIDCNLFVYSS 128 (400)
Q Consensus 79 ~~~~~~~l~ss------------~D~tI~lWd~~~~~~~-~~~~~V~sv~f~p~~~~~las~s 128 (400)
++. .+.+.+ ..+.+.+.+++.+... .....|.++.|+||| .++|...
T Consensus 407 DG~--~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG-~RiA~i~ 466 (591)
T PRK13616 407 DAD--AVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQLSRDG-VRAAMII 466 (591)
T ss_pred CCC--ceEEEecCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEEECCCC-CEEEEEE
Confidence 753 222211 2344554566666543 334579999999997 5555543
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.92 Score=48.36 Aligned_cols=59 Identities=25% Similarity=0.241 Sum_probs=41.5
Q ss_pred ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEec----------CCeEE
Q psy12356 179 REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRD----------YLCVK 248 (400)
Q Consensus 179 ~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~----------D~tIk 248 (400)
+....|...|+|-|=|.++.+.. + .+..|++.|. .|+=.|+.|++.+ |.-|+
T Consensus 188 r~lf~G~t~G~V~LrD~~s~~~i----h------------t~~aHs~siS--DfDv~GNlLitCG~S~R~~~l~~D~Fvk 249 (1118)
T KOG1275|consen 188 RNLFCGDTRGTVFLRDPNSFETI----H------------TFDAHSGSIS--DFDVQGNLLITCGYSMRRYNLAMDPFVK 249 (1118)
T ss_pred cEEEeecccceEEeecCCcCcee----e------------eeecccccee--eeeccCCeEEEeecccccccccccchhh
Confidence 34455667899999888764321 1 2457888884 5666888888632 67899
Q ss_pred EEeCCCC
Q psy12356 249 VWDLHME 255 (400)
Q Consensus 249 lWD~~~~ 255 (400)
|||+++-
T Consensus 250 VYDLRmm 256 (1118)
T KOG1275|consen 250 VYDLRMM 256 (1118)
T ss_pred hhhhhhh
Confidence 9999985
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.024 Score=57.62 Aligned_cols=163 Identities=8% Similarity=0.168 Sum_probs=95.7
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeC----CCeEEEEec
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSS----KGTIRLCDM 138 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~----Dg~i~lWD~ 138 (400)
..+.++++..+.+.+.++++..+|.|-+-.++... ...+....++++|++-+.+.||.|-. |-.++|||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 44778888765543445567788988887664332 12345678999999987677777632 568999999
Q ss_pred ccccccccccceeccCcccceeceeccCchhhh---hhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCC
Q psy12356 139 RAAALCDRHSKCLIEGTNCNCQGLIVPESKREE---RQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT 215 (400)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 215 (400)
.++-.... +.. .|+.+..++ +....+...+.+|.....++++|+|+....- ..+
T Consensus 137 ~s~ltvPk-e~~------------~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~---~sv------- 193 (783)
T KOG1008|consen 137 NSLLTVPK-ESP------------LFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSV---SSV------- 193 (783)
T ss_pred ccccCCCc-ccc------------ccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhh---hhh-------
Confidence 88722111 000 000000011 0001222344555566788999998532110 011
Q ss_pred CcccccccccCeEEEEECC-CCcEEEEecCCeEEEEe-CCCCCCceee
Q psy12356 216 NKSFFSEIISSISDVKISN-SGRYMISRDYLCVKVWD-LHMESRPVET 261 (400)
Q Consensus 216 ~~~~~~~h~~~V~~v~fSp-dg~~las~~D~tIklWD-~~~~~~~l~~ 261 (400)
.+..+..+..+| .+.++++..|+.|-+|| .++-..|++.
T Consensus 194 -------nTk~vqG~tVdp~~~nY~cs~~dg~iAiwD~~rnienpl~~ 234 (783)
T KOG1008|consen 194 -------NTKYVQGITVDPFSPNYFCSNSDGDIAIWDTYRNIENPLQI 234 (783)
T ss_pred -------hhhhcccceecCCCCCceeccccCceeeccchhhhccHHHH
Confidence 123566777888 78899988899999999 3333344443
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=93.71 E-value=1.9 Score=42.28 Aligned_cols=57 Identities=11% Similarity=0.148 Sum_probs=37.3
Q ss_pred eEEEeeCCCeEEEEEccCCCcc-cc-cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME-EL-NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~-~~-~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
.+.+++.++.+..+|.++|+.. .. ......... .+ ..+..++.||.+..+|..+++.
T Consensus 243 ~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~~~p~~--~~-~~vyv~~~~G~l~~~d~~tG~~ 301 (377)
T TIGR03300 243 QVYAVSYQGRVAALDLRSGRVLWKRDASSYQGPAV--DD-NRLYVTDADGVVVALDRRSGSE 301 (377)
T ss_pred EEEEEEcCCEEEEEECCCCcEEEeeccCCccCceE--eC-CEEEEECCCCeEEEEECCCCcE
Confidence 6667778999999999888631 00 011112222 23 4566677899999999988843
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=93.14 E-value=1.9 Score=46.08 Aligned_cols=74 Identities=11% Similarity=0.258 Sum_probs=54.7
Q ss_pred cccceEEEEEcCCCcEEeecccc----------------------------------hhhcccccceeEEEEccCC---C
Q psy12356 306 HTYHINSISVNSDQLTVEASPRG----------------------------------IFADAHTYHISSTSVNSDQ---E 348 (400)
Q Consensus 306 ~~~~i~~i~~s~dg~~~~~~~~~----------------------------------~~~~gh~~~V~~i~fspDg---~ 348 (400)
-.+.|..|.+||+|++++-.+.+ .+...+...|.++.|+|.+ .
T Consensus 83 ~~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~ 162 (717)
T PF10168_consen 83 PLFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS 162 (717)
T ss_pred CceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence 34678999999999987632210 0112445689999999984 6
Q ss_pred EEEE-ecCCeEEEEeCccCCeeEEEEeecCCc
Q psy12356 349 TYLS-ADDLRINLWHLEITDQSFNIVDIKPTN 379 (400)
Q Consensus 349 ~las-~~D~~i~lW~~~~~~~~~~~~~~~~~~ 379 (400)
.|+. ..|+++|++|+.....+.+++...+.+
T Consensus 163 ~l~vLtsdn~lR~y~~~~~~~p~~v~~~~~~~ 194 (717)
T PF10168_consen 163 HLVVLTSDNTLRLYDISDPQHPWQVLSLSPGE 194 (717)
T ss_pred eEEEEecCCEEEEEecCCCCCCeEEEEcccCc
Confidence 6776 589999999998778888998887654
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.3 Score=49.79 Aligned_cols=66 Identities=21% Similarity=0.340 Sum_probs=48.3
Q ss_pred eeeEEEEEeccCCceEEEeeCCCeE--------EEEEccCCCcccccccE-EEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 70 KINKIRWLRRKNQAHFLLSTNDQSF--------NIVDIKPTNMEELNEVI-TAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss~D~tI--------~lWd~~~~~~~~~~~~V-~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
+|.-+.|+|.-+ .++....+|.+ |||++.. +...+ ++++|.||| +++|.|-.||+|+|-|+.+
T Consensus 22 ~i~~~ewnP~~d--LiA~~t~~gelli~R~n~qRlwtip~-----p~~~v~~sL~W~~DG-kllaVg~kdG~I~L~Dve~ 93 (665)
T KOG4640|consen 22 NIKRIEWNPKMD--LIATRTEKGELLIHRLNWQRLWTIPI-----PGENVTASLCWRPDG-KLLAVGFKDGTIRLHDVEK 93 (665)
T ss_pred ceEEEEEcCccc--hhheeccCCcEEEEEeccceeEeccC-----CCCccceeeeecCCC-CEEEEEecCCeEEEEEccC
Confidence 477889999653 55555556654 6666651 22234 499999985 8999999999999999999
Q ss_pred ccc
Q psy12356 141 AAL 143 (400)
Q Consensus 141 ~~~ 143 (400)
+..
T Consensus 94 ~~~ 96 (665)
T KOG4640|consen 94 GGR 96 (665)
T ss_pred CCc
Confidence 843
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.22 Score=48.09 Aligned_cols=72 Identities=13% Similarity=0.157 Sum_probs=55.3
Q ss_pred eeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 70 KINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
-|..++|+|.. .+.+.+++-++.|+|.|+++.... .....+++++|.-+..+.+-.|-..|.|.++|+|...
T Consensus 195 ~IrdlafSp~~-~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 195 FIRDLAFSPFN-EGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred hhhhhccCccc-cceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 37889999975 345667889999999999886531 2236799999999876555555559999999999873
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=92.86 E-value=10 Score=37.08 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=58.9
Q ss_pred CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCe
Q psy12356 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQS 93 (400)
Q Consensus 14 dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~t 93 (400)
+|.+|..++.+|.|.-+|..+++... .+.-.... ...... + ++.+++++.|+.
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W-----------~~~~~~~~------------~~~p~v--~--~~~v~v~~~~g~ 116 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLW-----------RVDLDERL------------SGGVGA--D--GGLVFVGTEKGE 116 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEee-----------eecCCCCc------------ccceEE--c--CCEEEEEcCCCE
Confidence 56678888889999999987653211 11111100 001111 1 236777788999
Q ss_pred EEEEEccCCCcc---cccccEEE-EEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 94 FNIVDIKPTNME---ELNEVITA-AEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 94 I~lWd~~~~~~~---~~~~~V~s-v~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
+..+|.++|+.. .....+.+ .... + ..++.++.|+.+..||.++++.
T Consensus 117 l~ald~~tG~~~W~~~~~~~~~~~p~v~--~-~~v~v~~~~g~l~a~d~~tG~~ 167 (377)
T TIGR03300 117 VIALDAEDGKELWRAKLSSEVLSPPLVA--N-GLVVVRTNDGRLTALDAATGER 167 (377)
T ss_pred EEEEECCCCcEeeeeccCceeecCCEEE--C-CEEEEECCCCeEEEEEcCCCce
Confidence 999999888731 11222221 1121 2 3556677899999999998853
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.31 Score=31.74 Aligned_cols=30 Identities=27% Similarity=0.325 Sum_probs=25.9
Q ss_pred eeEEEEEECCC-C--CeEEEecCCCeEEEEEcC
Q psy12356 4 YMREASQRFSD-G--ELLATGDKGGRVVIFQRD 33 (400)
Q Consensus 4 ~~v~~v~fspd-G--~~Las~s~Dg~I~iwd~~ 33 (400)
|.|++++|||+ + ++||-+=.-|.|.|+|+.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R 33 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR 33 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence 57999999984 4 599988888999999986
|
It contains a characteristic DLL sequence motif. |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=92.61 E-value=4.1 Score=43.86 Aligned_cols=31 Identities=10% Similarity=0.255 Sum_probs=27.0
Q ss_pred cccCeEEEEECCCCcEEEEecCCeEEEEeCC
Q psy12356 223 IISSISDVKISNSGRYMISRDYLCVKVWDLH 253 (400)
Q Consensus 223 h~~~V~~v~fSpdg~~las~~D~tIklWD~~ 253 (400)
-..+|..|..+.||++|+++.+.-+-|.|+.
T Consensus 617 lG~pI~~iDvt~DGkwilaTc~tyLlLi~t~ 647 (794)
T PF08553_consen 617 LGDPIIGIDVTADGKWILATCKTYLLLIDTL 647 (794)
T ss_pred CCCCeeEEEecCCCcEEEEeecceEEEEEEe
Confidence 3478999999999999998888888898875
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=92.53 E-value=7.6 Score=34.84 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=67.1
Q ss_pred CCeEEEEEccCCCc---cc----ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceecee
Q psy12356 91 DQSFNIVDIKPTNM---EE----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLI 163 (400)
Q Consensus 91 D~tI~lWd~~~~~~---~~----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
+++|..||.++|+. .. ....+ ...+ +++ ..+..++.++.|..||..+|++.-+. .
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~-~~~~-~~~-~~v~~~~~~~~l~~~d~~tG~~~W~~---------------~ 63 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPV-ATAV-PDG-GRVYVASGDGNLYALDAKTGKVLWRF---------------D 63 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEE-ETEE-EET-TEEEEEETTSEEEEEETTTSEEEEEE---------------E
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCcc-ceEE-EeC-CEEEEEcCCCEEEEEECCCCCEEEEe---------------e
Confidence 56777788777652 11 11222 1122 223 45666689999999999888543211 0
Q ss_pred ccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE-E
Q psy12356 164 VPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI-S 241 (400)
Q Consensus 164 ~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la-s 241 (400)
++.. ........+. ..+++ .++.+..+|..+++..- +...... +.. ..........++..++ +
T Consensus 64 ~~~~-~~~~~~~~~~~v~v~~--~~~~l~~~d~~tG~~~W---~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~ 128 (238)
T PF13360_consen 64 LPGP-ISGAPVVDGGRVYVGT--SDGSLYALDAKTGKVLW---SIYLTSS-PPA--------GVRSSSSPAVDGDRLYVG 128 (238)
T ss_dssp CSSC-GGSGEEEETTEEEEEE--TTSEEEEEETTTSCEEE---EEEE-SS-CTC--------STB--SEEEEETTEEEEE
T ss_pred cccc-ccceeeeccccccccc--ceeeeEecccCCcceee---eeccccc-ccc--------ccccccCceEecCEEEEE
Confidence 0000 0000001112 22222 46789999988776421 1000000 000 0011112222255554 4
Q ss_pred ecCCeEEEEeCCCCCCceeeec
Q psy12356 242 RDYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 242 ~~D~tIklWD~~~~~~~l~~~~ 263 (400)
..++.|..+|.+++. .+-.+.
T Consensus 129 ~~~g~l~~~d~~tG~-~~w~~~ 149 (238)
T PF13360_consen 129 TSSGKLVALDPKTGK-LLWKYP 149 (238)
T ss_dssp ETCSEEEEEETTTTE-EEEEEE
T ss_pred eccCcEEEEecCCCc-EEEEee
Confidence 568999999999874 455554
|
... |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=92.39 E-value=3.4 Score=41.04 Aligned_cols=110 Identities=16% Similarity=0.193 Sum_probs=63.4
Q ss_pred eEEEEEECCCCCeEEEe-cCC----CeEEEEEcCCCCccccCCCCcceeee-eeeccCcchhhcccccccceeeEEEEEe
Q psy12356 5 MREASQRFSDGELLATG-DKG----GRVVIFQRDPLSKTSIPKRGEYNVYS-TFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~-s~D----g~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
.+...++||||++||-+ +.. .+++|+|+.+++ .+. .+..- ....+.|.+
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~-----------~l~d~i~~~--------------~~~~~~W~~ 179 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGK-----------FLPDGIENP--------------KFSSVSWSD 179 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTE-----------EEEEEEEEE--------------ESEEEEECT
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCc-----------CcCCccccc--------------ccceEEEeC
Confidence 45578999999999954 333 459999998642 111 11111 012389998
Q ss_pred ccCCceEEEeeC-----------CCeEEEEEccCCCc------ccc-ccc-EEEEEEecCCCCEEEEEeCCC---eEEEE
Q psy12356 79 RKNQAHFLLSTN-----------DQSFNIVDIKPTNM------EEL-NEV-ITAAEFHPIDCNLFVYSSSKG---TIRLC 136 (400)
Q Consensus 79 ~~~~~~~l~ss~-----------D~tI~lWd~~~~~~------~~~-~~~-V~sv~f~p~~~~~las~s~Dg---~i~lW 136 (400)
++. .++.... ...|++|++.+..- +.. ... ...+..++++..++++..... .+.+-
T Consensus 180 d~~--~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~ 257 (414)
T PF02897_consen 180 DGK--GFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLL 257 (414)
T ss_dssp TSS--EEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEE
T ss_pred CCC--EEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEE
Confidence 864 4444321 33478888866541 111 223 567888998755555555543 46666
Q ss_pred ecccc
Q psy12356 137 DMRAA 141 (400)
Q Consensus 137 D~~~~ 141 (400)
|+..+
T Consensus 258 d~~~~ 262 (414)
T PF02897_consen 258 DLDDG 262 (414)
T ss_dssp ECCCT
T ss_pred ecccc
Confidence 66653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.44 Score=31.08 Aligned_cols=32 Identities=19% Similarity=0.539 Sum_probs=26.3
Q ss_pred cEEEEEEecCCC--CEEEEEeCCCeEEEEecccc
Q psy12356 110 VITAAEFHPIDC--NLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 110 ~V~sv~f~p~~~--~~las~s~Dg~i~lWD~~~~ 141 (400)
.|+++.|+|... .+|+.+-.-+.|.|+|+|++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 478999998655 67888777899999999964
|
It contains a characteristic DLL sequence motif. |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.31 Score=51.36 Aligned_cols=103 Identities=18% Similarity=0.321 Sum_probs=71.3
Q ss_pred EEEECCCCCeEEEec----CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 8 ASQRFSDGELLATGD----KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 8 ~v~fspdG~~Las~s----~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
-.+|+|.--++|.++ ..|+|-||-=++ + | .-.+ +..-| +++++|+|..
T Consensus 20 i~SWHPsePlfAVA~fS~er~GSVtIfadtG-E----P---qr~V--t~P~h---------------atSLCWHpe~--- 71 (1416)
T KOG3617|consen 20 ISSWHPSEPLFAVASFSPERGGSVTIFADTG-E----P---QRDV--TYPVH---------------ATSLCWHPEE--- 71 (1416)
T ss_pred ccccCCCCceeEEEEecCCCCceEEEEecCC-C----C---Cccc--cccee---------------hhhhccChHH---
Confidence 356888888888886 357888884321 1 0 0001 11112 5679999964
Q ss_pred eEEEee-CCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 84 HFLLST-NDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 84 ~~l~ss-~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
.+++.+ .-|.+.+|...+.+. ..|...|..+.|+|+| +.++|+..-|.+.+|...
T Consensus 72 ~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G-~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 72 FVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDG-TVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred HHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCC-CeEEEcCCCceeEEEEee
Confidence 344444 468899998766552 4567789999999985 789999889999999876
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=91.90 E-value=1.4 Score=45.72 Aligned_cols=111 Identities=13% Similarity=0.071 Sum_probs=74.9
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.--.++..+++||-|+.-|.+.+|+...+.. . ..+..+-+ ..+..+..+++. ..
T Consensus 35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~---------~-~~~~~~~~------------~~~~~~~vs~~e--~l 90 (726)
T KOG3621|consen 35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEM---------R-KLKNEGAT------------GITCVRSVSSVE--YL 90 (726)
T ss_pred eEEEEEeecCCceEEEecccceEEEEecCchhh---------h-cccccCcc------------ceEEEEEecchh--Hh
Confidence 455667788999999999999999999875431 1 11121111 224455566654 24
Q ss_pred EEEeeCCCeEEEEEccCCCc----------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM----------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~----------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
+++++..+.|-+.-+..+.- +.|...|++++|++++ ..+.+|...|+|.+=.+..
T Consensus 91 vAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~-~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 91 VAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNG-MKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred hhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccc-cEEeecCCCceEEEEEech
Confidence 44566677888777765331 2245679999999986 6788888889998877766
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=91.84 E-value=0.66 Score=47.43 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=52.6
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceee-EEEEEeccCCc
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN-KIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~-~v~~sp~~~~~ 83 (400)
.|.-+.|+|--.+||.+..+|.|.+..++-++ +-++.-|. ..+. +++|.|||.
T Consensus 22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n~qR------------lwtip~p~------------~~v~~sL~W~~DGk-- 75 (665)
T KOG4640|consen 22 NIKRIEWNPKMDLIATRTEKGELLIHRLNWQR------------LWTIPIPG------------ENVTASLCWRPDGK-- 75 (665)
T ss_pred ceEEEEEcCccchhheeccCCcEEEEEeccce------------eEeccCCC------------CccceeeeecCCCC--
Confidence 35668899999999999999988887765211 22333232 1244 899999973
Q ss_pred eEEEeeCCCeEEEEEccCCC
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN 103 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~ 103 (400)
.++++=.||+|+|-|+.++.
T Consensus 76 llaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 76 LLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred EEEEEecCCeEEEEEccCCC
Confidence 45557789999999998765
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.78 Score=49.74 Aligned_cols=44 Identities=18% Similarity=0.403 Sum_probs=35.8
Q ss_pred ccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcC
Q psy12356 224 ISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKE 268 (400)
Q Consensus 224 ~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~ 268 (400)
+++|.+++|+.||++++.+ .+|.|.+||+.++ .+++.+.-|...
T Consensus 130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~-k~l~~i~e~~ap 174 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRA-KILKVITEHGAP 174 (1206)
T ss_pred CCcceeeEecCCCceeccccCCCcEEEEEccCC-cceeeeeecCCc
Confidence 3689999999999999876 7999999999985 467776555433
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=91.51 E-value=11 Score=34.74 Aligned_cols=118 Identities=10% Similarity=0.218 Sum_probs=64.3
Q ss_pred EEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE
Q psy12356 8 ASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL 87 (400)
Q Consensus 8 ~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ 87 (400)
.|++--+|.++++--.++.+.++++..... ... .+.++.++-.+ ....+.++..|+|.|.++ ++++
T Consensus 69 gI~y~g~~~~vl~~Er~~~L~~~~~~~~~~-------~~~-~~~~~~~~l~~----~~~~N~G~EGla~D~~~~--~L~v 134 (248)
T PF06977_consen 69 GITYLGNGRYVLSEERDQRLYIFTIDDDTT-------SLD-RADVQKISLGF----PNKGNKGFEGLAYDPKTN--RLFV 134 (248)
T ss_dssp EEEE-STTEEEEEETTTTEEEEEEE----T-------T---EEEEEEEE-------S---SS--EEEEEETTTT--EEEE
T ss_pred eEEEECCCEEEEEEcCCCcEEEEEEecccc-------ccc-hhhceEEeccc----ccCCCcceEEEEEcCCCC--EEEE
Confidence 566766777777665688999988854221 000 11111111000 011234577899998754 6777
Q ss_pred eeCCCeEEEEEccC--CC--cc-----c------ccccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 88 STNDQSFNIVDIKP--TN--ME-----E------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 88 ss~D~tI~lWd~~~--~~--~~-----~------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
+-.....+|+.+.. +. +. . ....+.+++|+|..+.+++-+..+..|-..|..
T Consensus 135 ~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~ 201 (248)
T PF06977_consen 135 AKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQ 201 (248)
T ss_dssp EEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT
T ss_pred EeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECCC
Confidence 76666677777654 21 10 1 123478999999988888888889999999943
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=91.49 E-value=1.7 Score=40.49 Aligned_cols=137 Identities=14% Similarity=0.197 Sum_probs=79.0
Q ss_pred EECCCCcEEEEe-c-----CCeEEEEeCCCCCCceeeecCCC-------cCCCCccc--CCCCCcee------e--cCcc
Q psy12356 231 KISNSGRYMISR-D-----YLCVKVWDLHMESRPVETYPTHT-------KEENGQLR--DPSNITAL------R--VPQI 287 (400)
Q Consensus 231 ~fSpdg~~las~-~-----D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~--~~~~~~~i------~--l~~~ 287 (400)
.|||||++|.++ + -|.|-|+|.+.+...+.+|.+|. ...||+.+ +++.+.+. + |-..
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsM 199 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSM 199 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhc
Confidence 599999999765 2 26899999998776777888764 34677753 23322211 1 1111
Q ss_pred cccceee---ccCc--cceec-cccccceEEEEEcCCCcEEeeccc-----------------chhh---------cccc
Q psy12356 288 KPIELTV---EASP--RRIFA-NAHTYHINSISVNSDQLTVEASPR-----------------GIFA---------DAHT 335 (400)
Q Consensus 288 ~~~~~~~---~~~~--~~~~~-~~~~~~i~~i~~s~dg~~~~~~~~-----------------~~~~---------~gh~ 335 (400)
.|.-.+. .+.. +.++. .-+...|..++.-+||+.+.+.-. +.++ -+-.
T Consensus 200 ePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~a 279 (366)
T COG3490 200 EPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFA 279 (366)
T ss_pred CccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHH
Confidence 1111111 1111 11121 135556899999999988764110 0000 0223
Q ss_pred cceeEEEEccCCCEEE-Ee-cCCeEEEEeCccCC
Q psy12356 336 YHISSTSVNSDQETYL-SA-DDLRINLWHLEITD 367 (400)
Q Consensus 336 ~~V~~i~fspDg~~la-s~-~D~~i~lW~~~~~~ 367 (400)
+.|-+|+.+-+..+++ |+ .-+..-+||..++.
T Consensus 280 nYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~ 313 (366)
T COG3490 280 NYIGSIAANRRDGLVALTSPRGNRAVIWDAATGA 313 (366)
T ss_pred hhhhheeecccCCeEEEecCCCCeEEEEEcCCCc
Confidence 5688999987766655 45 45567799998754
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.97 Score=45.33 Aligned_cols=108 Identities=18% Similarity=0.228 Sum_probs=65.0
Q ss_pred EEEEEECCCCCeEEEec---CC-CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 6 REASQRFSDGELLATGD---KG-GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 6 v~~v~fspdG~~Las~s---~D-g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
+..-+|+|+|+.|+-.+ .. ..+.+++++.+. ...+..+.+++. .-+|+||+.
T Consensus 195 ~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~---------~~~i~~~~g~~~---------------~P~fspDG~ 250 (425)
T COG0823 195 ILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGK---------RPVILNFNGNNG---------------APAFSPDGS 250 (425)
T ss_pred eeccccCcCCCceEEEEEecCCCceEEEEeccCCc---------cceeeccCCccC---------------CccCCCCCC
Confidence 44567899998887653 22 358888887653 222334566642 357999985
Q ss_pred CceEEEe-eCCCe--EEEEEccCCCccccc---ccEEEEEEecCCCCEEEEEe-CCCeEEEEeccc
Q psy12356 82 QAHFLLS-TNDQS--FNIVDIKPTNMEELN---EVITAAEFHPIDCNLFVYSS-SKGTIRLCDMRA 140 (400)
Q Consensus 82 ~~~~l~s-s~D~t--I~lWd~~~~~~~~~~---~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~~~ 140 (400)
+++.+ ..|+. |.+.|+.+++...++ +.-+.=.|+|+|. .++..+ ..|.-+||-+..
T Consensus 251 --~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~-~ivf~Sdr~G~p~I~~~~~ 313 (425)
T COG0823 251 --KLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGS-KIVFTSDRGGRPQIYLYDL 313 (425)
T ss_pred --EEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCC-EEEEEeCCCCCcceEEECC
Confidence 55554 55665 556677776643332 1223567899975 555554 466656665443
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=90.77 E-value=3 Score=44.69 Aligned_cols=96 Identities=19% Similarity=0.296 Sum_probs=55.2
Q ss_pred ceeeEEEEEECCCCCeEEEecCCCeEEEEEcCCC-CccccCCCCccee-eeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 2 LVYMREASQRFSDGELLATGDKGGRVVIFQRDPL-SKTSIPKRGEYNV-YSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 2 ~~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~-~~~~~~~~~~~~~-~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
+...|..|.+||+|.+||-.+..| |.|-.+... ........|...+ -+++.-. ..+.....+-.|..+.|+|.
T Consensus 83 ~~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~----~~~~~~~~~~~i~qv~WhP~ 157 (717)
T PF10168_consen 83 PLFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVD----ERFFTSNSSLEIKQVRWHPW 157 (717)
T ss_pred CceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEec----hhhccCCCCceEEEEEEcCC
Confidence 356899999999999999988765 445444321 0000000000000 0111110 11111122345899999998
Q ss_pred cC-CceEEEeeCCCeEEEEEccCC
Q psy12356 80 KN-QAHFLLSTNDQSFNIVDIKPT 102 (400)
Q Consensus 80 ~~-~~~~l~ss~D~tI~lWd~~~~ 102 (400)
+. +.++++=..|+++|++|+...
T Consensus 158 s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 158 SESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CCCCCeEEEEecCCEEEEEecCCC
Confidence 74 456776678999999999643
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=90.34 E-value=0.95 Score=30.21 Aligned_cols=32 Identities=13% Similarity=0.351 Sum_probs=27.5
Q ss_pred ccccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 107 LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 107 ~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
....|..++|+|.. .++|.++.||.|.++.+.
T Consensus 10 l~~~v~~~~w~P~m-dLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 10 LPSRVSCMSWCPTM-DLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCCcEEEEEECCCC-CEEEEEECCCeEEEEECC
Confidence 34568899999985 799999999999999983
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=88.77 E-value=0.89 Score=44.36 Aligned_cols=99 Identities=11% Similarity=0.225 Sum_probs=56.5
Q ss_pred CCCCCeEEEe---------cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 12 FSDGELLATG---------DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 12 spdG~~Las~---------s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
||||++++.. +..+...|+|+.++. .+ .+.... ..+....|||++.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~---------~~---~l~~~~------------~~~~~~~~sP~g~- 55 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGE---------IT---PLTPPP------------PKLQDAKWSPDGK- 55 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTE---------EE---ESS-EE------------TTBSEEEE-SSST-
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCc---------eE---ECcCCc------------cccccceeecCCC-
Confidence 7999998874 345778899988642 11 111111 2366789999973
Q ss_pred ceEEEeeCCCeEEEEEccCCCcccc---------------------cccEEEEEEecCCCCEEEEEeC-CCeEEEEec
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNMEEL---------------------NEVITAAEFHPIDCNLFVYSSS-KGTIRLCDM 138 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~~~---------------------~~~V~sv~f~p~~~~~las~s~-Dg~i~lWD~ 138 (400)
.++-..++.|.+++..++....+ -+.-.++-||||+ +.||.... +..|+.+.+
T Consensus 56 --~~~~v~~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~-~~la~~~~d~~~v~~~~~ 130 (353)
T PF00930_consen 56 --YIAFVRDNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDS-KYLAFLRFDEREVPEYPL 130 (353)
T ss_dssp --EEEEEETTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTS-SEEEEEEEE-TTS-EEEE
T ss_pred --eeEEEecCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCC-CEEEEEEECCcCCceEEe
Confidence 44444568899998766542110 0112467899986 56777655 455555444
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=88.63 E-value=8 Score=36.87 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=53.9
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.+.++.+..++||++||+++...-.+-||--. ..++.|... .+..|..+.|.|++
T Consensus 144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~---------------~~w~~~~r~--------~~~riq~~gf~~~~-- 198 (302)
T PF14870_consen 144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQ---------------TTWQPHNRN--------SSRRIQSMGFSPDG-- 198 (302)
T ss_dssp ---EEEEEE-TTS-EEEEETTSSEEEEE-TT----------------SS-EEEE----------SSS-EEEEEE-TTS--
T ss_pred cceeEeEEECCCCcEEEEECcccEEEEecCCC---------------ccceEEccC--------ccceehhceecCCC--
Confidence 46788899999999999887665555676421 134455421 12568999999985
Q ss_pred ceEEEeeCCCeEEEEEcc-CCC-cc----c--ccc-cEEEEEEecCCCCEEEEEeCC
Q psy12356 83 AHFLLSTNDQSFNIVDIK-PTN-ME----E--LNE-VITAAEFHPIDCNLFVYSSSK 130 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~-~~~-~~----~--~~~-~V~sv~f~p~~~~~las~s~D 130 (400)
.+......+.|++=+.. ..+ .. . ... .+.+++|.|+ ..++|+|+..
T Consensus 199 -~lw~~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~-~~~wa~gg~G 253 (302)
T PF14870_consen 199 -NLWMLARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPP-NEIWAVGGSG 253 (302)
T ss_dssp --EEEEETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSS-S-EEEEESTT
T ss_pred -CEEEEeCCcEEEEccCCCCccccccccCCcccCceeeEEEEecCC-CCEEEEeCCc
Confidence 34444577888877621 111 11 1 122 2788999986 4677766553
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=88.03 E-value=1.5 Score=47.61 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=30.4
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPL 35 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~ 35 (400)
.|.|++++|+.||.+++.|-.+|.|.+||+...
T Consensus 130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~ 162 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRA 162 (1206)
T ss_pred CCcceeeEecCCCceeccccCCCcEEEEEccCC
Confidence 578999999999999999999999999999753
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=87.84 E-value=2.7 Score=43.73 Aligned_cols=57 Identities=9% Similarity=0.240 Sum_probs=40.7
Q ss_pred eEEEeeCCCeEEEEEccCCCcccc-----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEEL-----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~~-----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.++.++.-|.+.|+....+.+... .+.+...+.|+++ .++|.|+..|.|-++-+..+
T Consensus 47 ~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e-~lvAagt~~g~V~v~ql~~~ 108 (726)
T KOG3621|consen 47 YLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVE-YLVAAGTASGRVSVFQLNKE 108 (726)
T ss_pred eEEEecccceEEEEecCchhhhcccccCccceEEEEEecchh-HhhhhhcCCceEEeehhhcc
Confidence 566688889999999877764322 2345667788874 67787888888888776654
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=87.59 E-value=2.4 Score=38.20 Aligned_cols=53 Identities=13% Similarity=0.218 Sum_probs=34.5
Q ss_pred eEEEeeCCCeEEEEEccCCCcccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
...+++.|+-||.|.++.++. .+.+....|-| ...+++.+.|+.|++|++...
T Consensus 116 ~~c~~~~dg~ir~~n~~p~k~---~g~~g~h~~~~--~e~~ivv~sd~~i~~a~~S~d 168 (238)
T KOG2444|consen 116 LGCVGAQDGRIRACNIKPNKV---LGYVGQHNFES--GEELIVVGSDEFLKIADTSHD 168 (238)
T ss_pred eeEEeccCCceeeeccccCce---eeeeccccCCC--cceeEEecCCceEEeeccccc
Confidence 344578899999999987662 12333334444 245667777777788776655
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=86.88 E-value=23 Score=35.18 Aligned_cols=130 Identities=15% Similarity=0.179 Sum_probs=68.7
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccc---cCCCCcce-----------eeeeeeccCcc------hh--hc
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTS---IPKRGEYN-----------VYSTFQSHEPE------FD--YL 62 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~---~~~~~~~~-----------~~~~~~~h~~~------~~--~~ 62 (400)
.|..+.|+++-.-||.|-..|.|.||.....+... .+....++ .+..+. |-.+ +. ++
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~-~r~~~~~~~gf~P~~l 81 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDIS-DRAPPSLKEGFLPLTL 81 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-G-GG--TT-SEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEeh-hhCCcccccccCchhh
Confidence 58999999999999999999999998754322110 00000000 000000 0000 00 00
Q ss_pred ccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCc------cc------ccccEEEEEEec---CCC----CE
Q psy12356 63 KSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNM------EE------LNEVITAAEFHP---IDC----NL 123 (400)
Q Consensus 63 ~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~------~~------~~~~V~sv~f~p---~~~----~~ 123 (400)
-... .+.|.+++-|.-| .++.+..+|++.|-|++.-.. .. ....|++++|.. .++ -.
T Consensus 82 ~~~~-~g~vtal~~S~iG---Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~ 157 (395)
T PF08596_consen 82 LDAK-QGPVTALKNSDIG---FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSIC 157 (395)
T ss_dssp E----S-SEEEEEE-BTS---EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEE
T ss_pred eecc-CCcEeEEecCCCc---EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceE
Confidence 0111 3568899887544 566778899999999976541 22 123578888862 111 13
Q ss_pred EEEEeCCCeEEEEecc
Q psy12356 124 FVYSSSKGTIRLCDMR 139 (400)
Q Consensus 124 las~s~Dg~i~lWD~~ 139 (400)
++.|...|.+.+|.+.
T Consensus 158 L~vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 158 LLVGTNSGNVLTFKIL 173 (395)
T ss_dssp EEEEETTSEEEEEEEE
T ss_pred EEEEeCCCCEEEEEEe
Confidence 5556667888888764
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=86.47 E-value=3.1 Score=41.75 Aligned_cols=98 Identities=17% Similarity=0.233 Sum_probs=50.6
Q ss_pred EEEECCCCCeEEEe-cCCCeEEEE--EcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 8 ASQRFSDGELLATG-DKGGRVVIF--QRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 8 ~v~fspdG~~Las~-s~Dg~I~iw--d~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.-+|||||++||-+ ..||...|| |+.... ..-+....+.. ..=.|+|||. .
T Consensus 242 ~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~---------~~~Lt~~~gi~---------------~~Ps~spdG~--~ 295 (425)
T COG0823 242 APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN---------LPRLTNGFGIN---------------TSPSWSPDGS--K 295 (425)
T ss_pred CccCCCCCCEEEEEECCCCCccEEEEcCCCCc---------ceecccCCccc---------------cCccCCCCCC--E
Confidence 45799999988854 557766555 544321 00011111111 1235889884 4
Q ss_pred EEE-eeCCCe--EEEEEccCCCccccc---ccEEEEEEecCCCCEEEEEeC-CCe
Q psy12356 85 FLL-STNDQS--FNIVDIKPTNMEELN---EVITAAEFHPIDCNLFVYSSS-KGT 132 (400)
Q Consensus 85 ~l~-ss~D~t--I~lWd~~~~~~~~~~---~~V~sv~f~p~~~~~las~s~-Dg~ 132 (400)
++. +...|. |.+.|++.+.....+ ..=..-.++|+| ..|+..+. +|.
T Consensus 296 ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG-~~i~~~~~~~g~ 349 (425)
T COG0823 296 IVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDG-DKIVFESSSGGQ 349 (425)
T ss_pred EEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCC-CEEEEEeccCCc
Confidence 444 444554 555566655432111 111145678986 56666654 344
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=86.09 E-value=7.4 Score=40.63 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=47.1
Q ss_pred eeeEEEEEeccCCceEEEee-CCCeEEEEEccCCC------ccc---------ccccEEEEEEecCCCCEEEEEeCCCeE
Q psy12356 70 KINKIRWLRRKNQAHFLLST-NDQSFNIVDIKPTN------MEE---------LNEVITAAEFHPIDCNLFVYSSSKGTI 133 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss-~D~tI~lWd~~~~~------~~~---------~~~~V~sv~f~p~~~~~las~s~Dg~i 133 (400)
....|+++||+. .+++++ -+.+|-|.|+++.+ ++. ....=...+|.++| +.+.|-..|..|
T Consensus 322 sPHGV~vSPDGk--ylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G-~aytslf~dsqv 398 (635)
T PRK02888 322 NPHGVNTSPDGK--YFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRG-NAYTTLFLDSQI 398 (635)
T ss_pred CccceEECCCCC--EEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCC-CEEEeEeeccee
Confidence 355788999874 444444 48999999997643 110 00011256899885 677777789999
Q ss_pred EEEecccc
Q psy12356 134 RLCDMRAA 141 (400)
Q Consensus 134 ~lWD~~~~ 141 (400)
--||+...
T Consensus 399 ~kwn~~~a 406 (635)
T PRK02888 399 VKWNIEAA 406 (635)
T ss_pred EEEehHHH
Confidence 99999874
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=83.97 E-value=7.7 Score=38.68 Aligned_cols=41 Identities=22% Similarity=0.172 Sum_probs=33.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccC
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHE 56 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~ 56 (400)
.+.++..+|+|++.|+.+.=|.|.|+|+..+ .+++-++|+-
T Consensus 309 ~~~~i~~sP~~~laA~tDslGRV~LiD~~~~-----------~vvrmWKGYR 349 (415)
T PF14655_consen 309 EGESICLSPSGRLAAVTDSLGRVLLIDVARG-----------IVVRMWKGYR 349 (415)
T ss_pred eEEEEEECCCCCEEEEEcCCCcEEEEECCCC-----------hhhhhhccCc
Confidence 3678999999999999888899999999854 3466677764
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=83.47 E-value=2.4 Score=26.51 Aligned_cols=25 Identities=16% Similarity=0.299 Sum_probs=16.8
Q ss_pred EEEEEECCCCCeEEEec-CC--CeEEEE
Q psy12356 6 REASQRFSDGELLATGD-KG--GRVVIF 30 (400)
Q Consensus 6 v~~v~fspdG~~Las~s-~D--g~I~iw 30 (400)
-....|||||++|+-++ .+ |.-.||
T Consensus 11 ~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 11 DGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp EEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 45778999999998655 34 555555
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=82.93 E-value=8.3 Score=39.10 Aligned_cols=93 Identities=14% Similarity=0.065 Sum_probs=57.5
Q ss_pred eEEEEECCCCc--------EEEEecCCeEEEEeCCCCCC-ceeeecCCCcC-----------CCCcccCCCCCceeecCc
Q psy12356 227 ISDVKISNSGR--------YMISRDYLCVKVWDLHMESR-PVETYPTHTKE-----------ENGQLRDPSNITALRVPQ 286 (400)
Q Consensus 227 V~~v~fSpdg~--------~las~~D~tIklWD~~~~~~-~l~~~~~h~~~-----------~~g~~~~~~~~~~i~l~~ 286 (400)
|+-+.+.|+++ .|++-+|+.|-=||.+-.+. .|.--++|++. .+|-++.+|..+-|||.+
T Consensus 378 i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYd 457 (644)
T KOG2395|consen 378 INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYD 457 (644)
T ss_pred cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccceeeecCCceEEEeecCCcEEeeh
Confidence 55567777655 34445688888999886543 33333455432 455566677778888754
Q ss_pred ccccceeeccCccceeccccccceEEEEEcCCCcEEeecc
Q psy12356 287 IKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASP 326 (400)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~ 326 (400)
- .+...++.+.+--..|..|..+.||++|.+.|
T Consensus 458 r-------i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc 490 (644)
T KOG2395|consen 458 R-------IGRRAKTALPGLGDAIKHVDVTADGKWILATC 490 (644)
T ss_pred h-------hhhhhhhcccccCCceeeEEeeccCcEEEEec
Confidence 2 12222333334445699999999999887644
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=81.60 E-value=12 Score=40.50 Aligned_cols=64 Identities=11% Similarity=0.074 Sum_probs=46.2
Q ss_pred eeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 71 INKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
..|++-+.+ +.+++|+.+|.|||+|--..+ +.++..+|.+|..+.||..+|||| +..+-|.|+.
T Consensus 580 Fs~~aTt~~---G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc--~tyLlLi~t~ 647 (794)
T PF08553_consen 580 FSCFATTED---GYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC--KTYLLLIDTL 647 (794)
T ss_pred ceEEEecCC---ceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee--cceEEEEEEe
Confidence 455555443 589999999999999953222 345678899999999976555554 5678888864
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=81.34 E-value=56 Score=31.93 Aligned_cols=45 Identities=16% Similarity=0.221 Sum_probs=27.5
Q ss_pred cceEEEEEcCCCcEEeecccchhhcccc--cceeEEEEccCCCEEEEe
Q psy12356 308 YHINSISVNSDQLTVEASPRGIFADAHT--YHISSTSVNSDQETYLSA 353 (400)
Q Consensus 308 ~~i~~i~~s~dg~~~~~~~~~~~~~gh~--~~V~~i~fspDg~~las~ 353 (400)
..|..+.+.+||..+...... +..+.. ..+..|.+.|||.++++-
T Consensus 292 ~~v~~~~l~~~g~~~~~~~~~-~l~~~~~~~rp~dv~~~pDG~Lyv~d 338 (367)
T TIGR02604 292 QLIVRYSLEPKGAGFKGERPE-FLRSNDTWFRPVNVTVGPDGALYVSD 338 (367)
T ss_pred CEEEEEEeecCCCccEeecCc-eEecCCCcccccceeECCCCCEEEEE
Confidence 347777887777554432211 111211 356679999999988874
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=81.13 E-value=62 Score=32.29 Aligned_cols=30 Identities=17% Similarity=0.240 Sum_probs=24.7
Q ss_pred cCeEEEEECCCCcEEEE-ecCCeEEEEeCCC
Q psy12356 225 SSISDVKISNSGRYMIS-RDYLCVKVWDLHM 254 (400)
Q Consensus 225 ~~V~~v~fSpdg~~las-~~D~tIklWD~~~ 254 (400)
+++..++.||+|++||- ..++.+.+....-
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf 247 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDF 247 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcc
Confidence 57999999999999996 5678888887654
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=80.64 E-value=25 Score=32.44 Aligned_cols=106 Identities=13% Similarity=0.132 Sum_probs=57.5
Q ss_pred eeEEEEEECCCCCeEEEec---CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 4 YMREASQRFSDGELLATGD---KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s---~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
+.+.+.+.||||+.+|... ....++++..... ... .+.+. .+..-.|.+++
T Consensus 24 ~~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~----------~~~--~~~g~--------------~l~~PS~d~~g 77 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP----------VRP--VLTGG--------------SLTRPSWDPDG 77 (253)
T ss_pred ccccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc----------cee--eccCC--------------ccccccccCCC
Confidence 4578899999999888766 2334555544321 111 11222 13445677764
Q ss_pred CCceEEEeeCCCeEEEEE-ccCCCcc-------cccccEEEEEEecCCCCEEEEEeC---CCeEEEEec
Q psy12356 81 NQAHFLLSTNDQSFNIVD-IKPTNME-------ELNEVITAAEFHPIDCNLFVYSSS---KGTIRLCDM 138 (400)
Q Consensus 81 ~~~~~l~ss~D~tI~lWd-~~~~~~~-------~~~~~V~sv~f~p~~~~~las~s~---Dg~i~lWD~ 138 (400)
. ...+...+...+++. ...+... .....|+++.++||| .++|.... ++.|.+=-+
T Consensus 78 ~--~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG-~RvA~v~~~~~~~~v~va~V 143 (253)
T PF10647_consen 78 W--VWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDG-TRVAVVVEDGGGGRVYVAGV 143 (253)
T ss_pred C--EEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCC-cEEEEEEecCCCCeEEEEEE
Confidence 2 333444455666663 3333311 112279999999997 55555542 355544433
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=80.33 E-value=5 Score=25.04 Aligned_cols=26 Identities=12% Similarity=0.230 Sum_probs=17.5
Q ss_pred cCeEEEEECCCCcEEE-Ee-cC--CeEEEE
Q psy12356 225 SSISDVKISNSGRYMI-SR-DY--LCVKVW 250 (400)
Q Consensus 225 ~~V~~v~fSpdg~~la-s~-~D--~tIklW 250 (400)
..-....|||||+.|+ ++ .+ +.-.||
T Consensus 9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3466799999999988 44 34 555555
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 400 | ||||
| 3dw8_B | 447 | Structure Of A Protein Phosphatase 2a Holoenzyme Wi | 6e-35 |
| >pdb|3DW8|B Chain B, Structure Of A Protein Phosphatase 2a Holoenzyme With B55 Subunit Length = 447 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 174 bits (441), Expect = 4e-50
Identities = 142/303 (46%), Positives = 168/303 (55%), Gaps = 61/303 (20%)
Query: 12 FS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEK 70
F+ GELLATGDKGGRVVIFQ++ +K RGEYNVYSTFQSHEPEFDYLKSLEIEEK
Sbjct: 36 FNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEK 95
Query: 71 INKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNMEELNE--------------------- 109
INKIRWL +KN A FLLSTND++ + I +
Sbjct: 96 INKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVP 155
Query: 110 -----------------------VITAAEFHPIDCNLFVYSSSKGTIRLCDM----RAAA 142
I + + D ++ S+ I L + R+
Sbjct: 156 VFRPMDLMVEASPRRIFANAHTYHINSISINS-DYETYL-SADDLRINLWHLEITDRSFN 213
Query: 143 LCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCD 202
+ D + E T P S SS K IRLCDMRA+ALCD
Sbjct: 214 IVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS----------KGTIRLCDMRASALCD 263
Query: 203 RHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETY 262
RHSK FEEPEDP+N+SFFSEIISSISDVK S+SGRYM++RDYL VKVWDL+ME+RPVETY
Sbjct: 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETY 323
Query: 263 PTH 265
H
Sbjct: 324 QVH 326
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 99.1 bits (246), Expect = 6e-23
Identities = 83/179 (46%), Positives = 104/179 (58%), Gaps = 30/179 (16%)
Query: 208 FEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHTK 267
E D E I+ I + N+ ++++S + +K+W + + E Y
Sbjct: 80 HEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKE- 138
Query: 268 EENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR 327
E+G+ RDP+ +T LRVP +P++L VEASPRRIFANAHTYHINSI
Sbjct: 139 -EDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI-------------- 183
Query: 328 GIFADAHTYHISSTSVNSDQETYLSADDLRINLWHLEITDQSFNIVDIKPTNMEELNEV 386
S+NSD ETYLSADDLRINLWHLEITD+SFNIVDIKP NMEEL EV
Sbjct: 184 --------------SINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEV 228
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 1e-09
Identities = 55/426 (12%), Positives = 124/426 (29%), Gaps = 118/426 (27%)
Query: 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKT-----SIPKRGEYNVYSTF--QSHE 56
+ S E+ D +I +D +S T ++ + E + F +
Sbjct: 41 MPKSI---LSKEEI----DH----IIMSKDAVSGTLRLFWTLLSKQE-EMVQKFVEEVLR 88
Query: 57 PEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSF---NIVDIKPTNMEELNEVITA 113
+ +L S E+ R + L ++Q F N+ ++P +L + +
Sbjct: 89 INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP--YLKLRQALLE 146
Query: 114 AEFHPIDCNLFVYS---SSKGTIRLCDMRAAALCDRHS-KCLIEG-------TNCNCQGL 162
N+ + S K + A +C + +C ++ NCN
Sbjct: 147 LRPAK---NVLIDGVLGSGKTWV------ALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197
Query: 163 IVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222
++ ++ Q N + D+ +R+ ++ + +
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ-----AELRRLLKSKPYEN-----CL 247
Query: 223 IISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITAL 282
++ + +V+ + ++L + + T T R L
Sbjct: 248 LV--LLNVQNAK-----------AWNAFNLS--CKILLT----T-------RFKQVTDFL 281
Query: 283 RVPQIKPIE-------LTVEASPRRIFANAHTYHINSISVNSDQLTVEA---SPR--GIF 330
I LT + + + + L E +PR I
Sbjct: 282 SAATTTHISLDHHSMTLTPDEV-KSLLLKY-------LDCRPQDLPREVLTTNPRRLSII 333
Query: 331 ADAHTYHISSTSVNSDQETYLSADDLRINLWHLEITDQSFNIVDIKPTNMEELNEVREIY 390
A++ + + W D+ I++ +E E R+++
Sbjct: 334 AES-----------------IRDGLATWDNWKHVNCDKLTTIIESSLNVLEP-AEYRKMF 375
Query: 391 YLLLLF 396
L +F
Sbjct: 376 DRLSVF 381
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 400 | |||
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.98 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.98 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.98 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.98 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.97 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.97 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.97 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.97 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.97 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.97 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.97 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.97 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.97 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.97 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.97 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.97 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.97 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.97 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.97 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.97 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.97 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.97 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.97 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.97 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.97 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.97 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.97 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.97 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.96 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.96 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.96 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.96 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.96 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.96 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.96 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.96 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.96 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.96 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.96 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.96 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.96 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.96 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.96 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.95 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.95 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.95 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.95 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.95 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.95 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.95 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.95 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.95 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.94 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.94 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.94 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.94 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.94 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.94 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.94 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.94 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.94 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.94 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.94 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.93 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.93 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.93 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.93 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.93 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.93 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.93 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.93 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.92 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.92 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.92 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.92 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.92 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.91 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.91 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.91 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.9 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.9 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.9 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.9 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.89 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.89 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.89 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.88 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.87 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.86 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.85 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.84 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.84 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.82 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.82 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.81 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.81 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.8 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.8 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.8 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.79 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.79 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.79 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.78 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.77 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.75 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.74 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.74 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.74 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.74 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.72 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.71 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.71 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.71 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.71 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.68 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.66 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.64 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.62 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.6 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.59 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.59 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.57 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.56 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.54 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.53 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.53 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.52 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.47 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.44 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.4 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.39 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.36 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.33 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.33 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.31 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.3 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.29 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.29 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.26 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.24 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.24 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.23 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.16 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.15 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.14 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.13 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.1 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.09 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.05 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.01 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.01 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.0 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.99 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.98 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.96 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.95 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.92 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.9 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.88 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.83 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.81 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.8 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.8 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.79 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.67 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.67 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.63 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.63 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.61 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.61 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.54 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 98.54 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.52 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.5 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.48 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.46 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.3 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.28 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.24 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.2 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.11 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.05 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.02 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.02 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 97.83 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.79 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.74 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 97.65 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.5 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 97.39 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.28 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.04 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 97.03 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 96.9 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 96.67 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.2 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 96.19 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 96.09 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 96.06 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 96.0 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 96.0 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 95.97 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 95.86 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 95.72 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 95.65 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 95.65 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 95.53 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 95.51 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 95.47 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 95.37 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 95.36 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 95.28 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 95.27 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 95.2 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 95.19 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 95.17 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 94.86 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 94.75 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 94.65 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 94.49 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 94.42 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 94.33 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 94.3 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 94.2 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 94.2 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 94.02 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 93.99 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 93.37 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 92.94 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 92.62 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 91.96 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 91.5 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 91.12 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 90.87 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 90.01 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 88.81 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 88.5 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 86.54 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 86.04 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 85.7 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 84.77 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 84.4 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 83.41 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 83.17 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 83.16 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 82.92 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 81.7 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 81.59 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 81.29 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 80.72 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 80.11 |
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=336.51 Aligned_cols=334 Identities=14% Similarity=0.192 Sum_probs=222.5
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcch---------hhc------------
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEF---------DYL------------ 62 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~---------~~~------------ 62 (400)
..|++++|||||++||||+.||+|+|||+.+++. ....++.+|.... ..+
T Consensus 60 ~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~---------~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH---------ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC---------CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred CceEEEEECCCCcEEEEEeCCCCEEEeECCCCcc---------eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 4689999999999999999999999999864321 1112233332110 000
Q ss_pred -----------ccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEE
Q psy12356 63 -----------KSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYS 127 (400)
Q Consensus 63 -----------~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~ 127 (400)
.-.+|...|++++|+|+++ ..+++++.|++|+|||..+++ +..|...|++++|+|++ ++||++
T Consensus 131 v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~-~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg-~~las~ 208 (611)
T 1nr0_A 131 VFLFDTGTSNGNLTGQARAMNSVDFKPSRP-FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG-SLFAST 208 (611)
T ss_dssp EEETTTCCBCBCCCCCSSCEEEEEECSSSS-CEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS-SEEEEE
T ss_pred EEEeeCCCCcceecCCCCCceEEEECCCCC-eEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCC-CEEEEE
Confidence 0123456799999999863 247788999999999988765 35678899999999985 799999
Q ss_pred eCCCeEEEEecccccccccccc-eec--cCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCc-
Q psy12356 128 SSKGTIRLCDMRAAALCDRHSK-CLI--EGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDR- 203 (400)
Q Consensus 128 s~Dg~i~lWD~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~- 203 (400)
+.|++|++||++++........ .+. .+ ...+..+ .++|++...++++.|++|++||++++.....
T Consensus 209 s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h-~~~V~~v----------~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 209 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAH-SGSVFGL----------TWSPDGTKIASASADKTIKIWNVATLKVEKTI 277 (611)
T ss_dssp ETTSCEEEEETTTCCEEEECBCTTSSSCSS-SSCEEEE----------EECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ECCCcEEEEECCCCcEeeeecccccccccc-CCCEEEE----------EECCCCCEEEEEeCCCeEEEEeCCCCceeeee
Confidence 9999999999988743221100 000 00 0112222 3346776777778899999999987643210
Q ss_pred ---------------------------ccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCC
Q psy12356 204 ---------------------------HSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 204 ---------------------------~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~ 255 (400)
.++.+.. ........+.+|...|.+++|||||++|+++ .|++|++||+.++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~-~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 278 PVGTRIEDQQLGIIWTKQALVSISANGFINFVNP-ELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp ECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET-TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred cCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeC-CCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 0011100 0000111245899999999999999999975 6999999999875
Q ss_pred CCceeee-cCCC--------------------------------------------------------------------
Q psy12356 256 SRPVETY-PTHT-------------------------------------------------------------------- 266 (400)
Q Consensus 256 ~~~l~~~-~~h~-------------------------------------------------------------------- 266 (400)
. +...+ .+|.
T Consensus 357 ~-~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~ 435 (611)
T 1nr0_A 357 I-SNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA 435 (611)
T ss_dssp C-EEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEE
T ss_pred c-eeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEE
Confidence 3 22222 1221
Q ss_pred --------------------cCCCCccc-CCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeec
Q psy12356 267 --------------------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEAS 325 (400)
Q Consensus 267 --------------------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~ 325 (400)
+.|+|+++ +++.++++++|++..... ......+|...|++++|||||++|++.
T Consensus 436 ~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~------~~~~~~~h~~~v~~v~fspdg~~las~ 509 (611)
T 1nr0_A 436 IYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV------SEVKTIVHPAEITSVAFSNNGAFLVAT 509 (611)
T ss_dssp EEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE------EEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred EEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCce------eeeeccCCCCceEEEEECCCCCEEEEE
Confidence 23455543 345566666666532211 001113688899999999999999864
Q ss_pred ccc----h-------------hhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 326 PRG----I-------------FADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 326 ~~~----~-------------~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
... + ...+|...|++|+|||||++|||+ .|++|+||+++.++
T Consensus 510 s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 510 DQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp ETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred cCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 321 0 012499999999999999999997 79999999998654
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=309.44 Aligned_cols=280 Identities=13% Similarity=0.179 Sum_probs=200.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|++++|+|||++||||+.||+|+|||..++ +....+.+|.. .|.+++|+|+++
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~-----------~~~~~~~~h~~------------~v~~~~~s~~g~-- 121 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTS-----------QKTHAIKLHCP------------WVMECAFAPNGQ-- 121 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTT-----------EEEEEEECCCT------------TCCCCEECTTSS--
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------ccceEEecCCC------------CEEEEEECCCCC--
Confidence 46999999999999999999999999998753 23567888874 488999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC-----------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceec
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-----------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLI 152 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-----------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~ 152 (400)
.+++++.|++|+|||+.+.. +..|...|.++.|+|++...|++++.|++|++||++++.....+.....
T Consensus 122 ~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~ 201 (380)
T 3iz6_a 122 SVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP 201 (380)
T ss_dssp EEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS
T ss_pred EEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC
Confidence 67778999999999996532 2456778999999998777899999999999999998843221100000
Q ss_pred cCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 153 EGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
..-...+..+.+. ..+....++++.|++|++||++..... .+. +.+|.+.|.+|+|
T Consensus 202 ~~h~~~v~~~~~~---------~~~~~~l~sgs~D~~v~~wd~~~~~~~---~~~------------~~~h~~~v~~v~~ 257 (380)
T 3iz6_a 202 SGHTADVLSLSIN---------SLNANMFISGSCDTTVRLWDLRITSRA---VRT------------YHGHEGDINSVKF 257 (380)
T ss_dssp SSCCSCEEEEEEC---------SSSCCEEEEEETTSCEEEEETTTTCCC---CEE------------ECCCSSCCCEEEE
T ss_pred CCCccCeEEEEee---------cCCCCEEEEEECCCeEEEEECCCCCcc---eEE------------ECCcCCCeEEEEE
Confidence 0000011111111 124445666778999999999853221 111 3478899999999
Q ss_pred CCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 233 SNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 233 Spdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
+|+|++|+++ .|++|||||++++ .+++.+..|.... ..+...|.
T Consensus 258 ~p~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~~~~~~----------------------------------~~~~~~v~ 302 (380)
T 3iz6_a 258 FPDGQRFGTGSDDGTCRLFDMRTG-HQLQVYNREPDRN----------------------------------DNELPIVT 302 (380)
T ss_dssp CTTSSEEEEECSSSCEEEEETTTT-EEEEEECCCCSSS----------------------------------CCSSCSCS
T ss_pred ecCCCeEEEEcCCCeEEEEECCCC-cEEEEeccccccc----------------------------------ccccCceE
Confidence 9999999975 6899999999986 3566665442100 01112245
Q ss_pred EEEEcCCCcEEeecccc----h--------------hhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 312 SISVNSDQLTVEASPRG----I--------------FADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~~----~--------------~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
+++|+|+|+++++.... + ...+|.+.|++++|||||++|||+ .|++|+||++...+
T Consensus 303 ~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 303 SVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 66666766666543210 0 114899999999999999999997 69999999987543
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=296.89 Aligned_cols=270 Identities=12% Similarity=0.170 Sum_probs=191.7
Q ss_pred eeEEEEEECCCC-CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDG-ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG-~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.|++|+|+|++ ++||||+.|++|++|++.+... ....+++.|.+|.. .|.+++|+|++.
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~------~~~~~~~~~~~h~~------------~v~~~~~s~dg~- 78 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ------KFGVPVRSFKGHSH------------IVQDCTLTADGA- 78 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT------EEEEEEEEEECCSS------------CEEEEEECTTSS-
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCc------cccccceEEeCCcc------------cEEEEEECCCCC-
Confidence 569999999965 8999999999999999864210 01234667889974 599999999874
Q ss_pred ceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc--ccccceeccCcc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC--DRHSKCLIEGTN 156 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~--~~~~~~~~~~~~ 156 (400)
.+++++.|++|+|||+++++ +..|...|.+++|+|++ .+|++++.|++|++||++...+. ..|..
T Consensus 79 -~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~------- 149 (319)
T 3frx_A 79 -YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQCLATLLGHND------- 149 (319)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSCEEEEECCCSS-------
T ss_pred -EEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEeccCC-------
Confidence 67788999999999999886 35678889999999975 79999999999999999765221 11111
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
.+..+.+.+.. ....+....++++.|++|++||+++.... ..+.+|...|.+++|+|+|
T Consensus 150 -~v~~~~~~~~~----~~~~~~~~l~s~~~d~~i~~wd~~~~~~~----------------~~~~~h~~~v~~~~~sp~g 208 (319)
T 3frx_A 150 -WVSQVRVVPNE----KADDDSVTIISAGNDKMVKAWNLNQFQIE----------------ADFIGHNSNINTLTASPDG 208 (319)
T ss_dssp -CEEEEEECCC----------CCEEEEEETTSCEEEEETTTTEEE----------------EEECCCCSCEEEEEECTTS
T ss_pred -cEEEEEEccCC----CCCCCccEEEEEeCCCEEEEEECCcchhh----------------eeecCCCCcEEEEEEcCCC
Confidence 11112221100 00113334566778999999999875431 1134788999999999999
Q ss_pred cEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEE
Q psy12356 237 RYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISV 315 (400)
Q Consensus 237 ~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 315 (400)
++|+++ .|++|+|||++++ .++..+..|. .|.+++|
T Consensus 209 ~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~------------------------------------------~v~~~~~ 245 (319)
T 3frx_A 209 TLIASAGKDGEIMLWNLAAK-KAMYTLSAQD------------------------------------------EVFSLAF 245 (319)
T ss_dssp SEEEEEETTCEEEEEETTTT-EEEEEEECCS------------------------------------------CEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCC-cEEEEecCCC------------------------------------------cEEEEEE
Confidence 999975 6999999999975 3555554432 1334444
Q ss_pred cCCCcEEeeccc---------------------chhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 316 NSDQLTVEASPR---------------------GIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 316 s~dg~~~~~~~~---------------------~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
+|||.+++++.. ..+..+|...|.+++|||||++||++ .|++|+|||+.+
T Consensus 246 sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 246 SPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp CSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred cCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 444444332111 00113567789999999999999997 799999999875
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=305.75 Aligned_cols=267 Identities=12% Similarity=0.160 Sum_probs=200.4
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|+|++||+|+.||+|+|||+.+++ ..+++.+|+. .|.+++|+|+++
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~-----------~~~~l~~h~~------------~V~~v~~~~~~~-- 163 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGD-----------FERTLKGHTD------------SVQDISFDHSGK-- 163 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCC-----------CCEEECCCSS------------CEEEEEECTTSS--
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----------EEEEEeccCC------------cEEEEEEcCCCC--
Confidence 468999999999999999999999999998642 3567888974 499999999864
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|++|+|||+.+++ +..|...|++++|+|++ +.|++++.|++|++||++++.....+..+ . ..+
T Consensus 164 ~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~h----~-~~v 237 (410)
T 1vyh_C 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGH----R-EWV 237 (410)
T ss_dssp EEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECC----S-SCE
T ss_pred EEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeCC----C-ccE
Confidence 77788999999999998876 34677889999999985 78999999999999999988432211100 0 011
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC----
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS---- 235 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd---- 235 (400)
.. +...+++...++++.|++|++||++++... .. +.+|...|.+++|+|+
T Consensus 238 ~~----------~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~----~~------------~~~h~~~v~~~~~~~~~~~~ 291 (410)
T 1vyh_C 238 RM----------VRPNQDGTLIASCSNDQTVRVWVVATKECK----AE------------LREHRHVVECISWAPESSYS 291 (410)
T ss_dssp EE----------EEECTTSSEEEEEETTSCEEEEETTTCCEE----EE------------ECCCSSCEEEEEECCSCGGG
T ss_pred EE----------EEECCCCCEEEEEcCCCeEEEEECCCCcee----eE------------ecCCCceEEEEEEcCccccc
Confidence 11 122356666677778999999999875432 11 3467789999999997
Q ss_pred ----------------CcEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCccccc
Q psy12356 236 ----------------GRYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPI 290 (400)
Q Consensus 236 ----------------g~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~ 290 (400)
|.+|++ +.|++|+|||++++ .++..+.+|. +.++|+++ +++.+++|++|++...
T Consensus 292 ~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~-~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 292 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp GGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS
T ss_pred chhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC-ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 667886 47999999999986 4677787774 34555543 4556666666654211
Q ss_pred ceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 291 ELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
+. + .. ..+|...|.+++|+|++++|||+ .|++|+||++
T Consensus 371 ~~-----------------~-----------------~~-~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 371 RC-----------------M-----------------KT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CC-----------------C-----------------EE-EECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred ce-----------------E-----------------EE-EcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 10 0 00 13799999999999999999997 7999999985
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=298.20 Aligned_cols=276 Identities=12% Similarity=0.140 Sum_probs=185.3
Q ss_pred eeEEEEEECCCCCeEEEecC------CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 4 YMREASQRFSDGELLATGDK------GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
..|++|+|||||++|||||. |++|++|+..++... ........+|. ..|.+|+|+
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~-------~~~~~~~~~~~------------~~V~~~~~s 103 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN-------ESLCTAGVQTE------------AGVTDVAWV 103 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---C-------GGGCSEEEECS------------SCEEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcc-------eeEecccCCCC------------CCEEEEEEc
Confidence 46999999999999999997 788999998764311 11122334554 459999999
Q ss_pred eccCCceEEEeeCCCeEEEEEccCCCc--------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccc
Q psy12356 78 RRKNQAHFLLSTNDQSFNIVDIKPTNM--------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSK 149 (400)
Q Consensus 78 p~~~~~~~l~ss~D~tI~lWd~~~~~~--------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~ 149 (400)
|++ .+++++.|++|+|||+.+++. ..|...|++++|+|++ ++|++++.|++|++||++++.....+..
T Consensus 104 ~d~---~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~~~ 179 (357)
T 4g56_B 104 SEK---GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSYNA 179 (357)
T ss_dssp TTT---EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCC---CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 975 788889999999999987752 2466789999999985 7899999999999999998854322111
Q ss_pred eeccCcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeE
Q psy12356 150 CLIEGTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
+ ...+..+.+ .+++ ...++++.||+|++||+++++... .+. +..|...+.
T Consensus 180 h-----~~~v~~v~~----------s~~~~~~~~s~~~dg~v~~wd~~~~~~~~----~~~----------~~~~~~~v~ 230 (357)
T 4g56_B 180 H-----SSEVNCVAA----------CPGKDTIFLSCGEDGRILLWDTRKPKPAT----RID----------FCASDTIPT 230 (357)
T ss_dssp C-----SSCEEEEEE----------CTTCSSCEEEEETTSCEEECCTTSSSCBC----BCC----------CTTCCSCEE
T ss_pred C-----CCCEEEEEE----------ccCCCceeeeeccCCceEEEECCCCceee----eee----------ecccccccc
Confidence 0 011222222 2332 234555689999999998765321 111 124556799
Q ss_pred EEEECCCC-cEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCc-cc-CCCCCceeecCcccccceeeccC
Q psy12356 229 DVKISNSG-RYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQ-LR-DPSNITALRVPQIKPIELTVEAS 297 (400)
Q Consensus 229 ~v~fSpdg-~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~-~~-~~~~~~~i~l~~~~~~~~~~~~~ 297 (400)
+|+|+|++ ++||++ .|++|+|||++++ .+++++.+|. +.|++. ++ +++.+++|++|++...+
T Consensus 231 ~v~~sp~~~~~la~g~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~------ 303 (357)
T 4g56_B 231 SVTWHPEKDDTFACGDETGNVSLVNIKNP-DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE------ 303 (357)
T ss_dssp EEEECTTSTTEEEEEESSSCEEEEESSCG-GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE------
T ss_pred chhhhhcccceEEEeecccceeEEECCCC-cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc------
Confidence 99999985 577764 6899999999986 4677777774 334442 33 34555666665542110
Q ss_pred ccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEcc-CCCEEEEe-cCCeEEEEeCccCCe
Q psy12356 298 PRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNS-DQETYLSA-DDLRINLWHLEITDQ 368 (400)
Q Consensus 298 ~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fsp-Dg~~las~-~D~~i~lW~~~~~~~ 368 (400)
.+ ...+|...|++|+||| |+++|||+ .|++|++|++....+
T Consensus 304 -----------------------~~-------~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 304 -----------------------VF-------RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp -----------------------EE-------EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred -----------------------Ee-------EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 00 0137999999999999 89999997 799999999976443
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-37 Score=295.37 Aligned_cols=286 Identities=14% Similarity=0.180 Sum_probs=198.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeee-eeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYS-TFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|++++|||||++||+|+.|++|+|||+.++. ..... ...+|. ..|.+|+|+|+++
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~---------~~~~~~~~~~h~------------~~v~~~~~sp~g~-- 74 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDS---------WICKSVLSEGHQ------------RTVRKVAWSPCGN-- 74 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTE---------EEEEEEECSSCS------------SCEEEEEECTTSS--
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCc---------ceeeeeeccccC------------CcEEEEEECCCCC--
Confidence 68999999999999999999999999987531 11111 225676 4599999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc-
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN- 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~- 156 (400)
.+++++.|++|+|||+..+. +..|...|++++|+|++ ++|++++.|++|++||++++... .++..+..
T Consensus 75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~----~~~~~~~~h 149 (345)
T 3fm0_A 75 YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEY----ECVSVLNSH 149 (345)
T ss_dssp EEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCE----EEEEEECCC
T ss_pred EEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCe----EEEEEecCc
Confidence 77788999999999998764 34677889999999985 79999999999999999876311 11111110
Q ss_pred -cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 157 -CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
..+..+ ...|++...++++.|++|++||++.+... .. ..+.+|...|.+|+|+|+
T Consensus 150 ~~~v~~~----------~~~p~~~~l~s~s~d~~i~~w~~~~~~~~--~~------------~~~~~h~~~v~~l~~sp~ 205 (345)
T 3fm0_A 150 TQDVKHV----------VWHPSQELLASASYDDTVKLYREEEDDWV--CC------------ATLEGHESTVWSLAFDPS 205 (345)
T ss_dssp CSCEEEE----------EECSSSSCEEEEETTSCEEEEEEETTEEE--EE------------EEECCCSSCEEEEEECTT
T ss_pred CCCeEEE----------EECCCCCEEEEEeCCCcEEEEEecCCCEE--EE------------EEecCCCCceEEEEECCC
Confidence 111122 23466666777788999999998764311 00 113478899999999999
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEE
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSIS 314 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 314 (400)
|++|+++ .|++|+|||...+... ..+... +.....+ +...+...|...|++++
T Consensus 206 g~~l~s~s~D~~v~iW~~~~~~~~-~~~~~~-----------~~~~~~~--------------~~~~~~~~h~~~v~~v~ 259 (345)
T 3fm0_A 206 GQRLASCSDDRTVRIWRQYLPGNE-QGVACS-----------GSDPSWK--------------CICTLSGFHSRTIYDIA 259 (345)
T ss_dssp SSEEEEEETTSCEEEEEEECTTCT-TCCCCC--------------CEEE--------------EEEEECSSCSSCEEEEE
T ss_pred CCEEEEEeCCCeEEEeccccCCCC-ccceee-----------ccCCccc--------------eeEEecCCCCCcEEEEE
Confidence 9999974 7999999998654321 111000 0000000 00112234777889999
Q ss_pred EcCCCcEEeeccc----chh-------------------hcccccceeEEEEccCCC-EEEEe-cCCeEEEEeCccCCe
Q psy12356 315 VNSDQLTVEASPR----GIF-------------------ADAHTYHISSTSVNSDQE-TYLSA-DDLRINLWHLEITDQ 368 (400)
Q Consensus 315 ~s~dg~~~~~~~~----~~~-------------------~~gh~~~V~~i~fspDg~-~las~-~D~~i~lW~~~~~~~ 368 (400)
|+|++..+++++. +++ ..+|...|++|+|+|++. +|||+ .|++|++|++...++
T Consensus 260 ~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 260 WCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp ECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred EecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 9998887765331 011 148999999999999985 89997 799999999986553
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-37 Score=318.00 Aligned_cols=328 Identities=16% Similarity=0.140 Sum_probs=224.5
Q ss_pred eeEEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..|++|+|+|++. +||+|+.|++|+|||... .++.+++.+|+. .|.+|+|+|+++
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-----------~~~~~~l~~H~~------------~V~~v~fspdg~- 203 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-----------FKFKSTFGEHTK------------FVHSVRYNPDGS- 203 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEEEEETTT-----------BEEEEEECCCSS------------CEEEEEECTTSS-
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEEEEECCC-----------CeEeeeeccccC------------ceEEEEECCCCC-
Confidence 3689999999997 699999999999999763 245678889974 499999999874
Q ss_pred ceEEEeeCCCeEEEEEccCCCc-----c------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccce-
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNM-----E------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKC- 150 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~-----~------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~- 150 (400)
.+++++.|++|+|||+.+++. . .|...|.+++|+|++ ++|++++.|++|++||+++++........
T Consensus 204 -~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~ 281 (611)
T 1nr0_A 204 -LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVGT 281 (611)
T ss_dssp -EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred -EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCCC
Confidence 677889999999999987752 1 577889999999985 78999999999999999987543211000
Q ss_pred -----ec----------cCc---ccceece------eccCchh---hhhhcccCcceeecCCCCCeEEEeecccccccC-
Q psy12356 151 -----LI----------EGT---NCNCQGL------IVPESKR---EERQSSQNRREKEDNRRKPAIRLCDMRAAALCD- 202 (400)
Q Consensus 151 -----~~----------~~~---~~~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~- 202 (400)
.. ... ....|+. ....++. ..+.++|++...++++.|++|++||+.++....
T Consensus 282 ~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 282 RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeee
Confidence 00 000 0000000 0000111 112345677777777889999999987653210
Q ss_pred --------------------------cccccccCCCCCCCc---------------------------------------
Q psy12356 203 --------------------------RHSKFFEEPEDPTNK--------------------------------------- 217 (400)
Q Consensus 203 --------------------------~~~~~~~~~~~~~~~--------------------------------------- 217 (400)
..++.+.........
T Consensus 362 ~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~ 441 (611)
T 1nr0_A 362 FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 441 (611)
T ss_dssp SSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE
T ss_pred cccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCc
Confidence 001111000000000
Q ss_pred ccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCC-ceeeecCCC-------cCCCCccc-CCCCCceeecCcc
Q psy12356 218 SFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESR-PVETYPTHT-------KEENGQLR-DPSNITALRVPQI 287 (400)
Q Consensus 218 ~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~-~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~ 287 (400)
.....|...+.+++|||||++||++ .|++|+|||+.++.. +++. .+|. ++|+|+++ +++.++++++|++
T Consensus 442 ~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~ 520 (611)
T 1nr0_A 442 LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSV 520 (611)
T ss_dssp EEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEG
T ss_pred eeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEc
Confidence 0000234568899999999999975 689999999986421 2233 4563 67999976 5788999999987
Q ss_pred cccceeeccCccce-eccccccceEEEEEcCCCcEEeeccc----c------------hhhccc-ccceeEEEEccCCCE
Q psy12356 288 KPIELTVEASPRRI-FANAHTYHINSISVNSDQLTVEASPR----G------------IFADAH-TYHISSTSVNSDQET 349 (400)
Q Consensus 288 ~~~~~~~~~~~~~~-~~~~~~~~i~~i~~s~dg~~~~~~~~----~------------~~~~gh-~~~V~~i~fspDg~~ 349 (400)
...... ... ...+|...|++++|+|||++|++++. + ....|| ...|++++|+|||+
T Consensus 521 ~~~~~~-----~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~- 594 (611)
T 1nr0_A 521 ANNFEL-----AHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT- 594 (611)
T ss_dssp GGTTEE-----SCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-
T ss_pred CCCCce-----eeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-
Confidence 542111 111 12359999999999999999986432 1 112489 89999999999999
Q ss_pred EEEe-cCCeEEEEeCc
Q psy12356 350 YLSA-DDLRINLWHLE 364 (400)
Q Consensus 350 las~-~D~~i~lW~~~ 364 (400)
|||+ .|++||+|++.
T Consensus 595 l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 595 IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EEEEETTSCEEEEECC
T ss_pred EEEecCCCCEEEEecc
Confidence 8886 79999999973
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=289.78 Aligned_cols=261 Identities=16% Similarity=0.188 Sum_probs=193.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|||++||+|+.||+|+|||..++. .+..+..|. ..|.+++|+|+++
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~-----------~~~~~~~~~------------~~v~~~~~s~~~~-- 110 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN-----------KVHAIPLRS------------SWVMTCAYAPSGN-- 110 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCC-----------EEEEEECSS------------SCEEEEEECTTSS--
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCC-----------cceEeecCC------------ccEEEEEECCCCC--
Confidence 479999999999999999999999999987542 345677776 3489999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC--------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN--------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~--------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.+++++.|++|++||+.++. +..|...|.++.|+|++ .+++++.|++|++||++++........+
T Consensus 111 ~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h----- 183 (340)
T 1got_B 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGH----- 183 (340)
T ss_dssp EEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCC-----
T ss_pred EEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCC-----
Confidence 67778999999999997653 23567789999999964 5899999999999999988533211110
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
...+..+. ..|++...++++.|++|++||++++... .. +.+|...|.+++|+|+
T Consensus 184 ~~~v~~~~----------~~~~~~~l~sg~~d~~v~~wd~~~~~~~----~~------------~~~h~~~v~~v~~~p~ 237 (340)
T 1got_B 184 TGDVMSLS----------LAPDTRLFVSGACDASAKLWDVREGMCR----QT------------FTGHESDINAICFFPN 237 (340)
T ss_dssp SSCEEEEE----------ECTTSSEEEEEETTSCEEEEETTTCSEE----EE------------ECCCSSCEEEEEECTT
T ss_pred CCceEEEE----------ECCCCCEEEEEeCCCcEEEEECCCCeeE----EE------------EcCCcCCEEEEEEcCC
Confidence 01122222 2356666677778999999999876432 11 3467889999999999
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEE
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSIS 314 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 314 (400)
|++|+++ .|++|+|||++++. ++..+..+ .+...|.+++
T Consensus 238 ~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~~---------------------------------------~~~~~v~~~~ 277 (340)
T 1got_B 238 GNAFATGSDDATCRLFDLRADQ-ELMTYSHD---------------------------------------NIICGITSVS 277 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTTE-EEEEECCT---------------------------------------TCCSCEEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCc-EEEEEccC---------------------------------------CcccceEEEE
Confidence 9999975 69999999999753 44444311 0112355666
Q ss_pred EcCCCcEEeecccc----hh----------hcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 315 VNSDQLTVEASPRG----IF----------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 315 ~s~dg~~~~~~~~~----~~----------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
|+|||++++++... +| ..||...|.+++|+|||++|||+ .|++|+|||
T Consensus 278 ~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 66666665543211 11 14899999999999999999997 699999996
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=296.42 Aligned_cols=279 Identities=11% Similarity=0.082 Sum_probs=187.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|||||++||+++ |+++|+||..... ......++... .......++..|.+++|+|++
T Consensus 31 ~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~-----------~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~d~--- 94 (344)
T 4gqb_B 31 RQLEAARYRSDGALLLGAS-SLSGRCWAGSLWL-----------FKDPCAAPNEG-FCSAGVQTEAGVADLTWVGER--- 94 (344)
T ss_dssp SEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEE-----------ESSGGGTTCGG-GCSEEEEESSCEEEEEEETTT---
T ss_pred CCEEEEEECCCCCEEEEEe-CCceEEeeceeee-----------eccccccCCcc-eeeeeeccCCCEEEEEEeCCC---
Confidence 3589999999999999998 7788888742100 00000000000 000111223569999999975
Q ss_pred eEEEeeCCCeEEEEEccCCCc--------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM--------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~--------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
++++++.|++|+|||+++++. ..|...|++++|+|++ ++|++++.|++|++||++++..+.....+ .
T Consensus 95 ~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~~~~~~~h----~ 169 (344)
T 4gqb_B 95 GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVVLSSYRAH----A 169 (344)
T ss_dssp EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCC----S
T ss_pred eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCc----C
Confidence 788999999999999988762 2577889999999985 79999999999999999998543221110 0
Q ss_pred ccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
..+..+.+ .+++ ...++++.|++|++||+++++.. ..+. ...|...+.+++|+|
T Consensus 170 -~~V~~~~~----------~~~~~~~l~s~s~D~~v~iwd~~~~~~~----~~~~----------~~~~~~~~~~~~~~p 224 (344)
T 4gqb_B 170 -AQVTCVAA----------SPHKDSVFLSCSEDNRILLWDTRCPKPA----SQIG----------CSAPGYLPTSLAWHP 224 (344)
T ss_dssp -SCEEEEEE----------CSSCTTEEEEEETTSCEEEEETTSSSCE----EECC--------------CCCEEEEEECS
T ss_pred -CceEEEEe----------cCCCCCceeeecccccccccccccccee----eeee----------cceeeccceeeeecC
Confidence 11222222 2333 34556678999999999976532 1111 113445789999999
Q ss_pred C-CcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCc-cc-CCCCCceeecCcccccceeeccCccceec
Q psy12356 235 S-GRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQ-LR-DPSNITALRVPQIKPIELTVEASPRRIFA 303 (400)
Q Consensus 235 d-g~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~-~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~ 303 (400)
+ +++|+++ .|++|+|||++++ .+++++.+|. +.|+|. ++ +++.|++|++|+....+
T Consensus 225 ~~~~~l~sg~~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~------------ 291 (344)
T 4gqb_B 225 QQSEVFVFGDENGTVSLVDTKST-SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE------------ 291 (344)
T ss_dssp SCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE------------
T ss_pred CCCcceEEeccCCcEEEEECCCC-cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc------------
Confidence 5 5677764 6899999999986 4788888885 345653 33 45666677766542110
Q ss_pred cccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCE-EEEe-cCCeEEEEeCcc
Q psy12356 304 NAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQET-YLSA-DDLRINLWHLEI 365 (400)
Q Consensus 304 ~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~-las~-~D~~i~lW~~~~ 365 (400)
+ + ...||.+.|++|+|||||+. |+|+ .|++|++|++.+
T Consensus 292 ------~--~----------------~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 292 ------L--F----------------RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp ------E--E----------------EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred ------E--E----------------EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 0 0 01489999999999999975 5676 699999999975
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=288.68 Aligned_cols=270 Identities=11% Similarity=0.101 Sum_probs=194.3
Q ss_pred eeEEEEEECCC----CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 4 YMREASQRFSD----GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 4 ~~v~~v~fspd----G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
..|++|+|+|+ +++||||+.|++|+||+..+. .......+.+|.. .|.+++|+|+
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~---------~~~~~~~l~gh~~------------~v~~~~~~~~ 91 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE---------RLDLQWSLEGHQL------------GVVSVDISHT 91 (321)
T ss_dssp SCEEEEEEC-------CEEEEEETTSCEEEEEEETT---------EEEEEEEECCCSS------------CEEEEEECSS
T ss_pred CcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC---------CeeeeeeeccCCC------------CEEEEEECCC
Confidence 46999999985 679999999999999998753 2233446788874 4999999998
Q ss_pred cCCceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 80 KNQAHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 80 ~~~~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
++ .+++++.|++|+|||+.+++. ..+...+.+++|+|++ ++|++++.|++|++||++++....... . .
T Consensus 92 ~~--~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~~----~-~ 163 (321)
T 3ow8_A 92 LP--IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLD----T-R 163 (321)
T ss_dssp SS--EEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEEE----C-S
T ss_pred CC--EEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEec----C-C
Confidence 64 677789999999999988763 2345568889999985 799999999999999999874321100 0 0
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
...+..+ ...|++...++++.||.|++||+++++.. .. +.+|..+|.+++|+|+
T Consensus 164 ~~~v~~~----------~~spdg~~lasg~~dg~i~iwd~~~~~~~----~~------------~~~h~~~v~~l~~spd 217 (321)
T 3ow8_A 164 GKFILSI----------AYSPDGKYLASGAIDGIINIFDIATGKLL----HT------------LEGHAMPIRSLTFSPD 217 (321)
T ss_dssp SSCEEEE----------EECTTSSEEEEEETTSCEEEEETTTTEEE----EE------------ECCCSSCCCEEEECTT
T ss_pred CceEEEE----------EECCCCCEEEEEcCCCeEEEEECCCCcEE----EE------------EcccCCceeEEEEcCC
Confidence 0111122 23466766777788999999999876532 11 3467789999999999
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceecccc
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
|++|+++ .|++|+|||++++. ++..+.+|. +.|+|+++ +++.++++++|++...+.
T Consensus 218 ~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~-------------- 282 (321)
T 3ow8_A 218 SQLLVTASDDGYIKIYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC-------------- 282 (321)
T ss_dssp SCEEEEECTTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--------------
T ss_pred CCEEEEEcCCCeEEEEECCCcc-eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE--------------
Confidence 9999975 68999999999763 566676663 23444432 344455555554321100
Q ss_pred ccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 307 TYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 307 ~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
+ .. ..+|...|.+++|+|||++|+|+ .|++|+|||..
T Consensus 283 ---~-----------------~~-~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 283 ---V-----------------HT-FFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ---E-----------------EE-ECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ---E-----------------EE-EcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 0 00 13799999999999999999997 79999999963
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=286.70 Aligned_cols=301 Identities=9% Similarity=0.100 Sum_probs=198.3
Q ss_pred eeEEEEEE-----CC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 4 YMREASQR-----FS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 4 ~~v~~v~f-----sp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
..|++|+| +| ||++||||+.|++|+|||+.+.... .....+...+.+|.. .|.+++|+
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~----~~~~~~~~~l~~h~~------------~V~~~~~~ 85 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQN----GYFGIPHKALTGHNH------------FVSDLALS 85 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCS----SBSEEEEEEECCCSS------------CEEEEEEC
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcc----cccccccchhccCCC------------ceEEEEEC
Confidence 46899999 77 9999999999999999998753210 001234567788873 49999999
Q ss_pred eccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 78 RRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 78 p~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
|++. .+++++.|++|+|||+++++ +..|...|++++|+|++ ++|++++.|++|++||++......... ...
T Consensus 86 ~~~~--~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~--~~~ 160 (343)
T 2xzm_R 86 QENC--FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECKFSSAE--KEN 160 (343)
T ss_dssp SSTT--EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEEEECCT--TTS
T ss_pred CCCC--EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCceeeeec--ccC
Confidence 9864 67778999999999999886 34678899999999985 789999999999999997542110000 000
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
. ...+..+.+++.........+.....++++.||+|++||.+.. . .. .+.+|...|.+++|+
T Consensus 161 ~-~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~----~~------------~~~~h~~~v~~~~~s 222 (343)
T 2xzm_R 161 H-SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ-I----RY------------TFKAHESNVNHLSIS 222 (343)
T ss_dssp C-SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE-E----EE------------EEECCSSCEEEEEEC
T ss_pred C-CceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCc-e----eE------------EEcCccccceEEEEC
Confidence 0 0011112222110000011122344566678999999995421 1 01 134688899999999
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCCCCceeeec-CC-----CcCCCCcccCCCCCceeecCcccccceeeccCccceecccc
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHMESRPVETYP-TH-----TKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~~~~l~~~~-~h-----~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
|+|++|+++ .|++|+|||+.....+...+. ++ .+.|++++++.+.+..+++|++...+.. .
T Consensus 223 ~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~------~------ 290 (343)
T 2xzm_R 223 PNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKA------P------ 290 (343)
T ss_dssp TTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSC------S------
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCC------c------
Confidence 999999975 699999999965544555542 22 1456666665555666777765322110 0
Q ss_pred ccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 307 TYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 307 ~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
+. .+.+.. .....-..+|...|++++|+|||++||++ .|++|++|++++
T Consensus 291 ---~~--~~~~~~-----~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 291 ---VC--TIEAEP-----ITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp ---EE--ECCCCS-----GGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred ---eE--EeecCc-----chhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 00 000000 00000013789999999999999999997 799999999875
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=299.16 Aligned_cols=341 Identities=41% Similarity=0.562 Sum_probs=228.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++|+|+|||++||+|+.||+|+|||+.+.........+.+++...+++|.++++++.++.+++.|++++|+|+++..
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~ 108 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA 108 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcc
Confidence 57999999999999999999999999999875422222234555678899999888888888888899999999986434
Q ss_pred eEEEeeCCCeEEEEEccCCCc--------------------------------------------ccccccEEEEEEecC
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM--------------------------------------------EELNEVITAAEFHPI 119 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~--------------------------------------------~~~~~~V~sv~f~p~ 119 (400)
.+++++.|++|+|||+.++.. ..|...|++++|+|+
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 788899999999999976321 346678999999997
Q ss_pred CCCEEEEEeCCCeEEEEeccccc-ccccccceeccCcc--cceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeec
Q psy12356 120 DCNLFVYSSSKGTIRLCDMRAAA-LCDRHSKCLIEGTN--CNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDM 195 (400)
Q Consensus 120 ~~~~las~s~Dg~i~lWD~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~ 195 (400)
+ ++|+++ .|++|++||++... .............. ..+..+ ...|++ ...++++.||+|++||+
T Consensus 189 ~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~----------~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 189 Y-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAA----------EFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp S-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEE----------EECSSCTTEEEEEETTSCEEEEET
T ss_pred C-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEE----------EECCCCCcEEEEEeCCCeEEEEEC
Confidence 4 788998 89999999998542 11100000000000 112222 234555 56667778999999999
Q ss_pred ccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeeecCCC---------
Q psy12356 196 RAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHT--------- 266 (400)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~~h~--------- 266 (400)
+++..+....+.+..+..+.....+.+|...|.+++|+|+|++|+++++++|+|||+++...+++.+.+|.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~ 336 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSL 336 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHH
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccccccccc
Confidence 98775444445555443322233345566699999999999999986559999999997556788888885
Q ss_pred -------------cCCCCccc-CCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccc----
Q psy12356 267 -------------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRG---- 328 (400)
Q Consensus 267 -------------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~---- 328 (400)
+.++|+++ +++.++.|++|++...+.... .+|..........+...........
T Consensus 337 ~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITL--------EASRENNKPRTVLKPRKVCASGKRKKDEI 408 (447)
T ss_dssp HHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEE--------ECCSTTCCTTCBCCCCCEECSSCCCTTCE
T ss_pred ccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceee--------eecccccccccccCCccccccCCcccccc
Confidence 45778754 578899999998865433210 1111110000000111111111100
Q ss_pred -hhhcccccceeEEEEccCCCEEEEecCCeEEEEeCc
Q psy12356 329 -IFADAHTYHISSTSVNSDQETYLSADDLRINLWHLE 364 (400)
Q Consensus 329 -~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~ 364 (400)
.....+...|..++|+|+|.+||++..+.+.+|..+
T Consensus 409 ~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~~ 445 (447)
T 3dw8_B 409 SVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDK 445 (447)
T ss_dssp EGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEECC
T ss_pred cccccccCCceeEEEECCCCCEEEEEecceeeeeccc
Confidence 011245678999999999999999865568898743
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=286.81 Aligned_cols=264 Identities=14% Similarity=0.175 Sum_probs=188.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|||++||||+.||+|+|||..+.. ....+..|. ..|.+++|+|++.
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~-----------~~~~~~~~~------------~~v~~~~~sp~g~-- 119 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN-----------KEHAVTMPC------------TWVMACAYAPSGC-- 119 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-----------EEEEEECSS------------SCCCEEEECTTSS--
T ss_pred CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC-----------cceEEecCC------------CCEEEEEECCCCC--
Confidence 469999999999999999999999999987532 234556665 3488999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC----------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
.+++++.|+++++|++.... +..|...|.+++|+|++ ..|++++.|++|++||++++.....+..+
T Consensus 120 ~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~~~~~~h--- 195 (354)
T 2pbi_B 120 AIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLLQSFHGH--- 195 (354)
T ss_dssp EEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECC---
T ss_pred EEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEcCC---
Confidence 77778899999999986432 23467789999999985 78999999999999999988543221110
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
. ..+..+.+. ..+++...++++.||+|++||++++... +. +.+|...|.+++|+
T Consensus 196 -~-~~v~~~~~~--------~~~~g~~l~sgs~Dg~v~~wd~~~~~~~----~~------------~~~h~~~v~~v~~~ 249 (354)
T 2pbi_B 196 -G-ADVLCLDLA--------PSETGNTFVSGGCDKKAMVWDMRSGQCV----QA------------FETHESDVNSVRYY 249 (354)
T ss_dssp -S-SCEEEEEEC--------CCSSCCEEEEEETTSCEEEEETTTCCEE----EE------------ECCCSSCEEEEEEC
T ss_pred -C-CCeEEEEEE--------eCCCCCEEEEEeCCCeEEEEECCCCcEE----EE------------ecCCCCCeEEEEEe
Confidence 0 011111121 1123445666778999999999976532 12 34678899999999
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEE
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINS 312 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 312 (400)
|+|++|+++ .|++|||||++.+. ++..+..+. +...+.+
T Consensus 250 p~~~~l~s~s~D~~v~lwd~~~~~-~~~~~~~~~---------------------------------------~~~~~~~ 289 (354)
T 2pbi_B 250 PSGDAFASGSDDATCRLYDLRADR-EVAIYSKES---------------------------------------IIFGASS 289 (354)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTE-EEEEECCTT---------------------------------------CCSCEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCCC---------------------------------------cccceeE
Confidence 999999975 69999999999753 444443221 0112334
Q ss_pred EEEcCCCcEEeeccc----ch----------hhcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 313 ISVNSDQLTVEASPR----GI----------FADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 313 i~~s~dg~~~~~~~~----~~----------~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
++|+|||+++++... ++ ...+|...|++++|||||++|||+ .|++|+||+
T Consensus 290 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 444444444433211 00 014899999999999999999997 699999996
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=281.42 Aligned_cols=288 Identities=9% Similarity=0.071 Sum_probs=201.0
Q ss_pred eeEEEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.|++|+|+|+ |++|||||.||+|+|||+...+. ....+.+++++|.. .|.+++|+|+++
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~------~~~~~~~~l~~h~~------------~V~~~~~s~dg~- 99 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET------NYGIPQRALRGHSH------------FVSDVVISSDGQ- 99 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSS------CSEEEEEEECCCSS------------CEEEEEECTTSS-
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc------ccceeeEEEeCCCC------------CEEEEEECCCCC-
Confidence 56999999997 68999999999999999976431 12234567888874 599999999874
Q ss_pred ceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++++.|+.|++|+...+.. ..+...+....++|++ ++|++++.|+.+++||+......... .... ...
T Consensus 100 -~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~---~~~~-~~~ 173 (340)
T 4aow_A 100 -FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQ---DESH-SEW 173 (340)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEEC---SSSC-SSC
T ss_pred -EEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEE---eccc-cCc
Confidence 677789999999999987652 2344567888899975 78999999999999998766321100 0000 001
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
+..+.+.. .+.....++++.|++|++||++++... .. +.+|.+.|.+|+|+|+|++
T Consensus 174 v~~~~~~~--------~~~~~~~~s~~~d~~i~i~d~~~~~~~----~~------------~~~h~~~v~~~~~s~~~~~ 229 (340)
T 4aow_A 174 VSCVRFSP--------NSSNPIIVSCGWDKLVKVWNLANCKLK----TN------------HIGHTGYLNTVTVSPDGSL 229 (340)
T ss_dssp EEEEEECS--------CSSSCEEEEEETTSCEEEEETTTTEEE----EE------------ECCCSSCEEEEEECTTSSE
T ss_pred ccceEEcc--------CCCCcEEEEEcCCCEEEEEECCCCcee----eE------------ecCCCCcEEEEEECCCCCE
Confidence 11111110 112234455668999999999876532 11 3468889999999999999
Q ss_pred EEEe-cCCeEEEEeCCCCCCceeeecCCC------cCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 239 MISR-DYLCVKVWDLHMESRPVETYPTHT------KEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 239 las~-~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
|+++ .|++|+|||+++. .++..+.+|. +.+++.+++++.++++++|++....... .+ ..+
T Consensus 230 l~s~s~Dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~------~~-~~~----- 296 (340)
T 4aow_A 230 CASGGKDGQAMLWDLNEG-KHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD------EL-KQE----- 296 (340)
T ss_dssp EEEEETTCEEEEEETTTT-EEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE------EE-CCC-----
T ss_pred EEEEeCCCeEEEEEeccC-ceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEE------ec-ccc-----
Confidence 9975 6999999999986 4677777664 3566666666667788887753221100 00 000
Q ss_pred EEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 312 SISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
.......+|...|++|+|||||++|||+ .|++|+|||+.++.
T Consensus 297 --------------~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 297 --------------VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ---------------------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred --------------ceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 0001124799999999999999999997 69999999998754
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=303.77 Aligned_cols=289 Identities=15% Similarity=0.257 Sum_probs=221.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|||++|++++.|++|++||.+. +.+..+.+|.. .|.+++|+|+++
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~------------~~~~~~~~h~~------------~v~~~~~~~~~~-- 316 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASDDKTVKLWNRNG------------QLLQTLTGHSS------------SVWGVAFSPDGQ-- 316 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTS------------CEEEEECCCSS------------CEEEEEECTTSS--
T ss_pred CCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC------------cEEEEEecCCC------------CeEEEEECCCCC--
Confidence 4689999999999999999999999999753 23567788873 489999999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
.+++++.|++|++||+.+..+ ..+...|.+++|+|++ +.+++++.|++|++||.... +..... .. ...+.
T Consensus 317 ~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~~~-~~~~~~----~~-~~~v~ 389 (577)
T 2ymu_A 317 TIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNGQ-LLQTLT----GH-SSSVR 389 (577)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTCC-EEEEEE----CC-SSCEE
T ss_pred EEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcCCCC-EEEEec----CC-CCCeE
Confidence 777889999999999876653 4566789999999985 78999999999999996433 211110 00 01122
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
.+ .+++++...++++.|+.|++||... ... +. +.+|...|.+++|+||+++|+
T Consensus 390 ~~----------~~s~dg~~l~~~~~d~~v~~~~~~~-~~~----~~------------~~~~~~~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 390 GV----------AFSPDGQTIASASDDKTVKLWNRNG-QLL----QT------------LTGHSSSVWGVAFSPDDQTIA 442 (577)
T ss_dssp EE----------EECTTSSCEEEEETTSEEEEECTTC-CEE----EE------------EECCSSCEEEEEECTTSSEEE
T ss_pred EE----------EECCCCCEEEEEeCCCEEEEEeCCC-CEE----EE------------ecCCCCCeEEEEECCCCCEEE
Confidence 22 2346666666777899999999542 211 11 346888999999999999999
Q ss_pred E-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 241 S-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 241 s-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
+ +.|++|++||... .++..+.+|. +.|+|+++ +++.+++|++|+.. +...+.+ .+|...|+
T Consensus 443 ~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-------~~~~~~~-~~h~~~v~ 512 (577)
T 2ymu_A 443 SASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-------GQLLQTL-TGHSSSVR 512 (577)
T ss_dssp EEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-------SCEEEEE-ECCSSCEE
T ss_pred EEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-------CCEEEEE-eCCCCCEE
Confidence 7 4789999999753 4677888885 56899875 47788999999852 2222333 57999999
Q ss_pred EEEEcCCCcEEeeccc----chh---------hcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 312 SISVNSDQLTVEASPR----GIF---------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~----~~~---------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
+++|+|||++|++++. ++| ..||+..|.+|+|||||++|+|+ .|++|++||
T Consensus 513 ~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 513 GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999999886542 111 15899999999999999999997 799999997
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=272.57 Aligned_cols=271 Identities=13% Similarity=0.131 Sum_probs=197.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++|+|+|||++||+|+.||+|+|||+.++ +.++.+.+|.. .|.+++|+|+++
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~-----------~~~~~~~~~~~------------~v~~~~~~~~~~-- 68 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ-----------VEVRSIQVTET------------PVRAGKFIARKN-- 68 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTT-----------EEEEEEECCSS------------CEEEEEEEGGGT--
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCC-----------ceeEEeeccCC------------cEEEEEEeCCCC--
Confidence 46999999999999999999999999999753 34567888863 489999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|++|+|||+.+++ +..|...|++++|+|++ .+|++++.|++|++||++++..... .+... ...+
T Consensus 69 ~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~---~~~~h-~~~v 143 (304)
T 2ynn_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQ---TFEGH-EHFV 143 (304)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEE---EECCC-CSCE
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhh---hhccc-CCcE
Confidence 77788999999999999887 35678899999999985 7899999999999999987632110 00000 0111
Q ss_pred eceeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC--CC
Q psy12356 160 QGLIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN--SG 236 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp--dg 236 (400)
..+.+ .| +....++++.|++|++||++..... ..+ ..+|...|..+.|+| ++
T Consensus 144 ~~v~~----------~p~~~~~l~sgs~D~~v~iwd~~~~~~~----~~~-----------~~~~~~~v~~~~~~~~~~~ 198 (304)
T 2ynn_A 144 MCVAF----------NPKDPSTFASGCLDRTVKVWSLGQSTPN----FTL-----------TTGQERGVNYVDYYPLPDK 198 (304)
T ss_dssp EEEEE----------CTTCTTEEEEEETTSEEEEEETTCSSCS----EEE-----------ECCCTTCEEEEEECCSTTC
T ss_pred EEEEE----------CCCCCCEEEEEeCCCeEEEEECCCCCcc----cee-----------ccCCcCcEEEEEEEEcCCC
Confidence 22222 24 4455667778999999999865321 111 124556799999987 77
Q ss_pred cEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceeccccc
Q psy12356 237 RYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHT 307 (400)
Q Consensus 237 ~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (400)
++|++ +.|++|+|||++++ .++.++++|. +.|+++++ +++.+++|++|+....+. .
T Consensus 199 ~~l~s~s~D~~i~iWd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~------~-------- 263 (304)
T 2ynn_A 199 PYMITASDDLTIKIWDYQTK-SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV------E-------- 263 (304)
T ss_dssp CEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE------E--------
T ss_pred CEEEEEcCCCeEEEEeCCCC-ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCce------e--------
Confidence 88887 47999999999986 4788888884 45666643 466777777776532110 0
Q ss_pred cceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCC--EEEEecCCeEEEEeCcc
Q psy12356 308 YHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQE--TYLSADDLRINLWHLEI 365 (400)
Q Consensus 308 ~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~--~las~~D~~i~lW~~~~ 365 (400)
+.+ .+|...|.+++|+|+|. +||++.|+.+.+|++..
T Consensus 264 --------------------~~~-~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 264 --------------------KTL-NVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp --------------------EEE-CCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred --------------------eec-cCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 001 35777899999999985 58888777788998764
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=273.28 Aligned_cols=269 Identities=19% Similarity=0.273 Sum_probs=199.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|||++||+|+.||+|+||+..++ +....+.+|.. .|.+++|+|+++
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~-----------~~~~~~~~h~~------------~v~~~~~~~~~~-- 78 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-----------KFEKTISGHKL------------GISDVAWSSDSN-- 78 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTC-----------CEEEEECCCSS------------CEEEEEECTTSS--
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc-----------ccchhhccCCC------------ceEEEEEcCCCC--
Confidence 46999999999999999999999999998753 23556778873 499999999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|++|+|||+++++. ..|...|.+++|+|++ ++|++++.|++|++||++++........+ ...+
T Consensus 79 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----~~~v 152 (312)
T 4ery_A 79 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAH-----SDPV 152 (312)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCC-----SSCE
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEecCC-----CCcE
Confidence 777889999999999998763 4577889999999985 79999999999999999987432211100 0112
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+. ..+++...++++.||.|++||++++... ..+ ...+...+..++|+|+|++|
T Consensus 153 ~~~~----------~~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~-----------~~~~~~~~~~~~~~~~~~~l 207 (312)
T 4ery_A 153 SAVH----------FNRDGSLIVSSSYDGLCRIWDTASGQCL----KTL-----------IDDDNPPVSFVKFSPNGKYI 207 (312)
T ss_dssp EEEE----------ECTTSSEEEEEETTSCEEEEETTTCCEE----EEE-----------CCSSCCCEEEEEECTTSSEE
T ss_pred EEEE----------EcCCCCEEEEEeCCCcEEEEECCCCcee----eEE-----------eccCCCceEEEEECCCCCEE
Confidence 2222 2355555666778999999999876432 111 12345679999999999999
Q ss_pred EEe-cCCeEEEEeCCCCCCceeeecCCCc----------CCCCcc-cCCCCCceeecCcccccceeeccCccceeccccc
Q psy12356 240 ISR-DYLCVKVWDLHMESRPVETYPTHTK----------EENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHT 307 (400)
Q Consensus 240 as~-~D~tIklWD~~~~~~~l~~~~~h~~----------~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (400)
+++ .|++|++||++++ .+++.+.+|.. .+++.+ ++++.++.|++|++...+.
T Consensus 208 ~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~--------------- 271 (312)
T 4ery_A 208 LAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI--------------- 271 (312)
T ss_dssp EEEETTTEEEEEETTTT-EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE---------------
T ss_pred EEEcCCCeEEEEECCCC-cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh---------------
Confidence 874 6899999999986 46788887742 133443 3456666776665422110
Q ss_pred cceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe---cCCeEEEEeCc
Q psy12356 308 YHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA---DDLRINLWHLE 364 (400)
Q Consensus 308 ~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~---~D~~i~lW~~~ 364 (400)
+ .. ..+|...|.+++|+|++++||++ .|++|++|+.+
T Consensus 272 --------------~-----~~-~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 272 --------------V-----QK-LQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp --------------E-----EE-ECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred --------------h-----hh-hhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 0 01 14799999999999999999985 39999999865
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=303.14 Aligned_cols=293 Identities=11% Similarity=0.050 Sum_probs=193.7
Q ss_pred eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc----CCceEEEeeCCC
Q psy12356 17 LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK----NQAHFLLSTNDQ 92 (400)
Q Consensus 17 ~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~----~~~~~l~ss~D~ 92 (400)
++||++.|++|+|||+.+++. ......++.+|. ..|.+|+|+|++ ....+++++.|+
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~-------~~~~~~~l~~~~------------~~V~~v~wsp~~~~~~~~~~LAs~s~Dg 235 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTL-------HCVKVQTIVHSF------------GEVWDLKWHEGCHAPHLVGCLSFVSQEG 235 (524)
T ss_dssp -------CEEEEEEEEETTTC-------CEEEEEEEEECC------------CSEEEEEECSSCCCSSSSCEEEEEETTS
T ss_pred hhccCCCCceEEEEEccCCCC-------CceEEEEEEecC------------CcEEEEEECCCCCCCCCCceEEEEecCC
Confidence 344466889999999875421 111123455665 349999999972 123666788999
Q ss_pred eEEEEEccCCCc---------------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc----ccccceecc
Q psy12356 93 SFNIVDIKPTNM---------------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC----DRHSKCLIE 153 (400)
Q Consensus 93 tI~lWd~~~~~~---------------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~----~~~~~~~~~ 153 (400)
+|+|||+.++.. ..|...|++++|+|+ ..||+|+.||+|++||++++... ..|..
T Consensus 236 tvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~---- 309 (524)
T 2j04_B 236 TINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS---- 309 (524)
T ss_dssp CEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSSCSEEEECSSS----
T ss_pred eEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCCceEEeecccc----
Confidence 999999976531 235578999999985 47999999999999999876321 11111
Q ss_pred CcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc--CeEEE
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS--SISDV 230 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~V~~v 230 (400)
.+..+.+ .+.+++ ...++++.|++|||||++++... +. +.+|.. .|.+|
T Consensus 310 ----~V~sv~~--------~~s~~g~~~laS~S~D~tvklWD~~~~~~~----~~------------~~~~~~~~~v~~v 361 (524)
T 2j04_B 310 ----YILSVST--------AYSDFEDTVVSTVAVDGYFYIFNPKDIATT----KT------------TVSRFRGSNLVPV 361 (524)
T ss_dssp ----CEEEEEE--------ECCTTSCCEEEEEETTSEEEEECGGGHHHH----CE------------EEEECSCCSCCCE
T ss_pred ----cEEEEEE--------EcCCCCCeEEEEeccCCeEEEEECCCCCcc----cc------------cccccccCcccce
Confidence 1122200 122454 55677788999999999986542 11 123432 47899
Q ss_pred EECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccce
Q psy12356 231 KISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRI 301 (400)
Q Consensus 231 ~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~ 301 (400)
+|||+++.++++ .|++|||||++++. ++.++.+|. ++|+|+++ +++.++++++|++... ...+-.. .
T Consensus 362 ~fsp~~~~l~s~~~d~tv~lwd~~~~~-~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~--~~~~~~~-~ 437 (524)
T 2j04_B 362 VYCPQIYSYIYSDGASSLRAVPSRAAF-AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR--LLHGIKN-S 437 (524)
T ss_dssp EEETTTTEEEEECSSSEEEEEETTCTT-CCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS--TTTCC----
T ss_pred EeCCCcCeEEEeCCCCcEEEEECcccc-cceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh--hcccccc-C
Confidence 999999988864 68999999999864 567788885 67899865 6889999999986421 1111000 0
Q ss_pred eccccccceEEEEEcCCCcEEeecc-----------c-chhhcccccceeEEEEccCCC---EEEEe-cCCeEEEEeCcc
Q psy12356 302 FANAHTYHINSISVNSDQLTVEASP-----------R-GIFADAHTYHISSTSVNSDQE---TYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 302 ~~~~~~~~i~~i~~s~dg~~~~~~~-----------~-~~~~~gh~~~V~~i~fspDg~---~las~-~D~~i~lW~~~~ 365 (400)
-...+...|++++|+|||+.+.... . .....||...|++|+||||++ +||++ .|++||||+++.
T Consensus 438 ~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 438 SATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp ---CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred ccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 0011223578999999998654322 0 011258999999999999965 89998 689999999985
Q ss_pred C
Q psy12356 366 T 366 (400)
Q Consensus 366 ~ 366 (400)
.
T Consensus 518 ~ 518 (524)
T 2j04_B 518 E 518 (524)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=296.55 Aligned_cols=291 Identities=16% Similarity=0.264 Sum_probs=221.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|||++||+++.|+.|++||.+. +.+..+.+|.. .|++++|+|+++
T Consensus 222 ~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~------------~~~~~~~~~~~------------~v~~v~~~~d~~-- 275 (577)
T 2ymu_A 222 SSVRGVAFSPDGQTIASASDDKTVKLWNRNG------------QLLQTLTGHSS------------SVNGVAFRPDGQ-- 275 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEECTTS------------CEEEEECCCSS------------CEEEEEECTTSS--
T ss_pred CCEEEEEECCCCCEEEEEeCCCEEEEEeCCC------------CEEEEEecCCC------------CEEEEEEcCCCC--
Confidence 4588999999999999999999999999752 23567788874 499999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC---cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN---MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~---~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
.+++++.|++|++||..... +..|...|.+++|+|++ .+|++++.|++|++||+....+.. +... ...+.
T Consensus 276 ~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~~w~~~~~~~~~-----~~~~-~~~v~ 348 (577)
T 2ymu_A 276 TIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNGQHLQT-----LTGH-SSSVW 348 (577)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSCEEEE-----ECCC-SSCEE
T ss_pred EEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCCCeeEE-----EeCC-CCCEE
Confidence 67778999999999976543 34577889999999985 789999999999999987653210 0000 01112
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
.+ ...|++...++++.||.|++||... ... . .+.+|...|.+++|+|||++|+
T Consensus 349 ~~----------~~s~~g~~l~~~~~dg~v~~~~~~~-~~~----~------------~~~~~~~~v~~~~~s~dg~~l~ 401 (577)
T 2ymu_A 349 GV----------AFSPDGQTIASASDDKTVKLWNRNG-QLL----Q------------TLTGHSSSVRGVAFSPDGQTIA 401 (577)
T ss_dssp EE----------EECTTSSEEEEEETTSEEEEEETTC-CEE----E------------EEECCSSCEEEEEECTTSSCEE
T ss_pred EE----------EECCCCCEEEEEeCCCEEEEEcCCC-CEE----E------------EecCCCCCeEEEEECCCCCEEE
Confidence 22 2346666667777899999999542 211 1 1346778999999999999999
Q ss_pred Ee-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 241 SR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 241 s~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
++ .|++|+|||.. ..+++.+.+|. +.|+++++ +++.++++++|+... ...+. ..+|...|+
T Consensus 402 ~~~~d~~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-------~~~~~-~~~~~~~v~ 471 (577)
T 2ymu_A 402 SASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-------QLLQT-LTGHSSSVR 471 (577)
T ss_dssp EEETTSEEEEECTT--CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-------CEEEE-EECCSSCEE
T ss_pred EEeCCCEEEEEeCC--CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-------CEEEE-EcCCCCCEE
Confidence 74 68999999965 34678888885 46888865 577889999998532 11122 247899999
Q ss_pred EEEEcCCCcEEeeccc----chh---------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 312 SISVNSDQLTVEASPR----GIF---------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~----~~~---------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
+++|+|||++|++.+. ++| ..+|...|++|+|||||++||++ .|++|+|||..
T Consensus 472 ~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 472 GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 9999999999886542 111 14899999999999999999997 79999999964
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=291.28 Aligned_cols=283 Identities=14% Similarity=0.171 Sum_probs=185.3
Q ss_pred eEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|+||+|+| ++++||+|+.||+|+|||+.... ......+.+|. ..|++|+|+|.. +.
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~---------~~~~~~~~gH~------------~~V~~l~f~p~~-~~ 178 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD---------KPTFIKGIGAG------------GSITGLKFNPLN-TN 178 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCS---------CCEEECCCSSS------------CCCCEEEECSSC-TT
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC---------ceeEEEccCCC------------CCEEEEEEeCCC-CC
Confidence 599999999 67899999999999999997642 12233566786 459999999843 23
Q ss_pred eEEEeeCCCeEEEEEccCCCcc------cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc--ccccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC--DRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~--~~~~~~~~~~~ 155 (400)
.+++++.|++|+|||++++.+. .+...+.+++|+|++ ++|++|+.||+|++||++...+. ..|..
T Consensus 179 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~------ 251 (435)
T 4e54_B 179 QFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKELWNLRMHKK------ 251 (435)
T ss_dssp EEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSCBCCCSBCCSS------
T ss_pred EEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcceeEEEecccc------
Confidence 7778899999999999876532 123357889999985 79999999999999999765321 11111
Q ss_pred ccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
.+..+.+ .|++ ...++++.|++|++||++....... + ....+|...|.+|+|+|
T Consensus 252 --~v~~v~~----------~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~----~---------~~~~~h~~~v~~~~~sp 306 (435)
T 4e54_B 252 --KVTHVAL----------NPCCDWFLATASVDQTVKIWDLRQVRGKAS----F---------LYSLPHRHPVNAACFSP 306 (435)
T ss_dssp --CEEEEEE----------CTTCSSEEEEEETTSBCCEEETTTCCSSSC----C---------SBCCBCSSCEEECCBCT
T ss_pred --eEEeeee----------cCCCceEEEEecCcceeeEEecccccccce----E---------EEeeeccccccceeECC
Confidence 1222222 2443 3456667899999999987543211 1 00236888999999999
Q ss_pred CCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEE
Q psy12356 235 SGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSI 313 (400)
Q Consensus 235 dg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 313 (400)
||++|+++ .|++|+|||++++. ++..+.+|....... ...++. .+.+ ...+..+
T Consensus 307 dg~~l~s~~~D~~i~iwd~~~~~-~~~~~~~~~~~~~~~------~~~~~~-~~~~-----------------~~~~~~~ 361 (435)
T 4e54_B 307 DGARLLTTDQKSEIRVYSASQWD-CPLGLIPHPHRHFQH------LTPIKA-AWHP-----------------RYNLIVV 361 (435)
T ss_dssp TSSEEEEEESSSCEEEEESSSSS-SEEEECCCCCCCCSS------SCCCBC-EECS-----------------SSSCEEE
T ss_pred CCCeeEEEcCCCEEEEEECCCCc-cceEEeccccccccc------ceeEEE-EEcC-----------------CCCEEEE
Confidence 99999974 69999999999875 455666664211000 000000 0000 0011112
Q ss_pred EEcCCCcEEeec--------------cc--chhhcccccceeEE-EEccCCCEEEEecCCeEEEEeCccC
Q psy12356 314 SVNSDQLTVEAS--------------PR--GIFADAHTYHISST-SVNSDQETYLSADDLRINLWHLEIT 366 (400)
Q Consensus 314 ~~s~dg~~~~~~--------------~~--~~~~~gh~~~V~~i-~fspDg~~las~~D~~i~lW~~~~~ 366 (400)
.+++|++.++.. +. ..+..+|...|.++ +|||||++||++.|++|+||+++.+
T Consensus 362 ~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~g 431 (435)
T 4e54_B 362 GRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEA 431 (435)
T ss_dssp ECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC--
T ss_pred EEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcC
Confidence 222222111100 00 01124788889988 6999999999988889999999854
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=269.62 Aligned_cols=263 Identities=13% Similarity=0.168 Sum_probs=179.4
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|||++||||+.|++|+|||+.+. ..+++.++.+|+. .|.+|+|+|+..+.
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~---------~~~~~~~l~gH~~------------~V~~v~~s~~~~g~ 68 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE---------THKLIDTLTGHEG------------PVWRVDWAHPKFGT 68 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSS---------CBCCCEEECCCSS------------CEEEEEECCGGGCS
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCC---------CcEEEEEEccccC------------CeEEEEecCCCcCC
Confidence 46899999999999999999999999999742 1234668889974 49999998752223
Q ss_pred eEEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCC-CCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.+++++.|++|+|||++++.. ..|...|++++|+|+. +.+|++++.|++|++||++++..... ..+... .
T Consensus 69 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~--~~~~~h-~ 145 (297)
T 2pm7_B 69 ILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP--IIIDAH-A 145 (297)
T ss_dssp EEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC--EEEECC-S
T ss_pred EEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee--eeeecc-c
Confidence 677889999999999987642 3466789999999972 47899999999999999987631100 000000 0
Q ss_pred cceeceeccCchhhh---hhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 157 CNCQGLIVPESKREE---RQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
..+..+.+++..... ....+++...++++.|++|++||++.+...-.. ...+.+|...|.+|+|+
T Consensus 146 ~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~------------~~~l~~H~~~V~~v~~s 213 (297)
T 2pm7_B 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL------------ESTLEGHSDWVRDVAWS 213 (297)
T ss_dssp SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEE------------EEEECCCSSCEEEEEEC
T ss_pred CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEE------------EEEecCCCCceEEEEEC
Confidence 111222222110000 000012345667778999999999864311000 01245788999999999
Q ss_pred CCC---cEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 234 NSG---RYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 234 pdg---~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
|++ ++||++ .|++|+|||++++..+.... .+ .
T Consensus 214 p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~--------------------------------------~~-~----- 249 (297)
T 2pm7_B 214 PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKT--------------------------------------LL-K----- 249 (297)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEE--------------------------------------ES-S-----
T ss_pred CCCCCceEEEEEECCCcEEEEEeCCCCCcccee--------------------------------------ee-e-----
Confidence 995 788874 69999999997532110000 00 0
Q ss_pred eEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 310 INSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
..+|...|.+++|||||++||++ .|++|+||+.....
T Consensus 250 ---------------------~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g 287 (297)
T 2pm7_B 250 ---------------------EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (297)
T ss_dssp ---------------------SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred ---------------------cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCC
Confidence 02466778899999999999997 79999999987543
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=280.58 Aligned_cols=292 Identities=15% Similarity=0.213 Sum_probs=193.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchh---hc---ccccccceeeEEEEE
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFD---YL---KSLEIEEKINKIRWL 77 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~---~~---~~~~~~~~V~~v~~s 77 (400)
..|.+++|||||++||+|+ |++++||++.++. .+..+.+|..... .+ ........|.+++|+
T Consensus 65 ~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~-----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s 132 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGS-----------LVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS 132 (393)
T ss_dssp SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCC-----------EEEEECC-----------------CCCCBEEEEEEC
T ss_pred CEEEEEEECCCCCEEEEEc-CCcEEEEEecCCC-----------EEEEecCccccccccccccccccCCCceeEEEEEEC
Confidence 4688999999999999987 7899999997643 2334444432100 00 000112248999999
Q ss_pred eccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 78 RRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 78 p~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
|++. .+++++.|++|+|||+++++ +..|...|++++|+|++ ++|++++.|++|++||++++.......
T Consensus 133 ~dg~--~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~----- 204 (393)
T 1erj_A 133 PDGK--FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTLS----- 204 (393)
T ss_dssp TTSS--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE-----
T ss_pred CCCC--EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEEEEE-----
Confidence 9874 67788999999999998876 35678889999999985 789999999999999999884321100
Q ss_pred CcccceeceeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
. ...+..+. ..+ ++...++++.|++|++||++++.... .+..+. ....+|...|.+++|
T Consensus 205 ~-~~~v~~~~----------~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~----~~~~~~-----~~~~~h~~~v~~v~~ 264 (393)
T 1erj_A 205 I-EDGVTTVA----------VSPGDGKYIAAGSLDRAVRVWDSETGFLVE----RLDSEN-----ESGTGHKDSVYSVVF 264 (393)
T ss_dssp C-SSCEEEEE----------ECSTTCCEEEEEETTSCEEEEETTTCCEEE----EEC-----------CCCSSCEEEEEE
T ss_pred c-CCCcEEEE----------EECCCCCEEEEEcCCCcEEEEECCCCcEEE----eecccc-----cCCCCCCCCEEEEEE
Confidence 0 00111111 223 55566677789999999998765321 111000 112368889999999
Q ss_pred CCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceE
Q psy12356 233 SNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHIN 311 (400)
Q Consensus 233 Spdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 311 (400)
+|+|++|+++ .|++|+|||+++... ..... .+. .+.+... ..+|...|.
T Consensus 265 ~~~g~~l~s~s~d~~v~~wd~~~~~~-~~~~~----~~~------------------------~~~~~~~-~~~h~~~v~ 314 (393)
T 1erj_A 265 TRDGQSVVSGSLDRSVKLWNLQNANN-KSDSK----TPN------------------------SGTCEVT-YIGHKDFVL 314 (393)
T ss_dssp CTTSSEEEEEETTSEEEEEEC--------------------------------------------CEEEE-EECCSSCEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCCC-ccccc----CCC------------------------CCcceEE-EecccCcEE
Confidence 9999999975 699999999986532 11110 000 0000011 135777788
Q ss_pred EEEEcCCCcEEeecccc----hh----------hcccccceeEEEEcc------CCCEEEEe-cCCeEEEEeCcc
Q psy12356 312 SISVNSDQLTVEASPRG----IF----------ADAHTYHISSTSVNS------DQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~~----~~----------~~gh~~~V~~i~fsp------Dg~~las~-~D~~i~lW~~~~ 365 (400)
+++|+|+|+++++.+.. +| ..||...|.+++|+| ++++|||+ .|++|+||+++.
T Consensus 315 ~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 315 SVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 88888888877654321 11 248999999999886 78999997 799999999764
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=272.92 Aligned_cols=267 Identities=15% Similarity=0.139 Sum_probs=181.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++|+|+|||++||||+.|++|+|||+.++ ....+.++.+|+. .|.+|+|+|+..+.
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~---------~~~~~~~l~gH~~------------~V~~v~~~~~~~~~ 72 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG---------GQILIADLRGHEG------------PVWQVAWAHPMYGN 72 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETT---------EEEEEEEEECCSS------------CEEEEEECCGGGSS
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC---------CcEEEEEEcCCCc------------cEEEEEeCCCCCCC
Confidence 47999999999999999999999999998753 2234567889974 49999998742223
Q ss_pred eEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCC-CCEEEEEeCCCeEEEEeccccccc---ccccceecc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALC---DRHSKCLIE 153 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~---~~~~~~~~~ 153 (400)
.+++++.|++|+|||++++. +..|...|++++|+|++ +.+|++++.|++|++||++.+... .....+.
T Consensus 73 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~-- 150 (316)
T 3bg1_A 73 ILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHT-- 150 (316)
T ss_dssp CEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSS--
T ss_pred EEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecccc--
Confidence 78888999999999998764 23577789999999973 478999999999999999875211 1000000
Q ss_pred CcccceeceeccCchh-hhh------hcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccC
Q psy12356 154 GTNCNCQGLIVPESKR-EER------QSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISS 226 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 226 (400)
..+..+.+++... ... .....+...++++.|++|++||++..... ... ..+.+|...
T Consensus 151 ---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~-~~~------------~~l~~h~~~ 214 (316)
T 3bg1_A 151 ---IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW-KEE------------QKLEAHSDW 214 (316)
T ss_dssp ---SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE-EEE------------ECCBCCSSC
T ss_pred ---CCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc-cee------------eecccCCCc
Confidence 0111111111000 000 00011234677788999999999743210 000 113578899
Q ss_pred eEEEEECCCC----cEEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccce
Q psy12356 227 ISDVKISNSG----RYMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRI 301 (400)
Q Consensus 227 V~~v~fSpdg----~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~ 301 (400)
|.+|+|+|++ ++||+ +.|++|+|||+.+.... ... . +.
T Consensus 215 V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~--~~~------------------~-----------------~~ 257 (316)
T 3bg1_A 215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN--TWS------------------P-----------------KL 257 (316)
T ss_dssp EEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC--CCB------------------C-----------------CE
T ss_pred eEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc--chh------------------h-----------------hh
Confidence 9999999997 78887 47999999999853110 000 0 00
Q ss_pred eccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCeeEEEEee
Q psy12356 302 FANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQSFNIVDI 375 (400)
Q Consensus 302 ~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~~~~~~~~ 375 (400)
+ .+|...|.+++|||||++||++ .|++|+||+.....+...+-.+
T Consensus 258 ~-----------------------------~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~ 303 (316)
T 3bg1_A 258 L-----------------------------HKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303 (316)
T ss_dssp E-----------------------------EECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEEC
T ss_pred h-----------------------------hcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeec
Confidence 0 2467789999999999999997 7999999998654433333333
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-34 Score=273.93 Aligned_cols=269 Identities=11% Similarity=0.154 Sum_probs=175.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeee-ec-cCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTF-QS-HEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-~~-h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
..|++++|+|+ +||+|+.|++|+|||+..+ ..+....+ .+ |. ..|.+|+|+|+++
T Consensus 15 ~~v~~~~~s~~--~las~~~D~~i~lw~~~~~---------~~~~~~~~~~~~h~------------~~v~~v~~sp~~~ 71 (330)
T 2hes_X 15 EKIWSFDFSQG--ILATGSTDRKIKLVSVKYD---------DFTLIDVLDETAHK------------KAIRSVAWRPHTS 71 (330)
T ss_dssp SCEEEEEEETT--EEEEEESSSCEEEEECSSS---------CCEEEEEECTTCCC------------SCEEEEEECTTSS
T ss_pred CceeeeccCCC--EEEEEcCCCEEEEEEecCC---------CeEEEEEEecCCcc------------CCEEEEEECCCCC
Confidence 46899999998 9999999999999999753 12233444 33 65 4599999999874
Q ss_pred CceEEEeeCCCeEEEEEccCC-------C----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccce
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPT-------N----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKC 150 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~-------~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~ 150 (400)
.+++++.|++|+|||++.. + +..|...|++++|+|++ ++||+++.|++|++||++..... ..+
T Consensus 72 --~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~---~~~ 145 (330)
T 2hes_X 72 --LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEE---YEC 145 (330)
T ss_dssp --EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCC---CEE
T ss_pred --EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCC---eEE
Confidence 6778899999999998532 1 24577889999999985 79999999999999999543100 011
Q ss_pred eccCcc--cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeE
Q psy12356 151 LIEGTN--CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 151 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
+..+.. ..+..+ .+.|++...++++.|++|++||++.+.. .... .+.+|...|.
T Consensus 146 ~~~~~~h~~~v~~v----------~~~p~~~~l~s~s~D~~i~iW~~~~~~~--~~~~------------~~~~h~~~v~ 201 (330)
T 2hes_X 146 ISVLQEHSQDVKHV----------IWHPSEALLASSSYDDTVRIWKDYDDDW--ECVA------------VLNGHEGTVW 201 (330)
T ss_dssp EEEECCCSSCEEEE----------EECSSSSEEEEEETTSCEEEEEEETTEE--EEEE------------EECCCSSCEE
T ss_pred EEEeccCCCceEEE----------EECCCCCEEEEEcCCCeEEEEECCCCCe--eEEE------------EccCCCCcEE
Confidence 111111 112222 2346666677778899999999875421 0011 1347889999
Q ss_pred EEEECCC--CcEEEE-ecCCeEEEEeCCCCCC-------ceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCc
Q psy12356 229 DVKISNS--GRYMIS-RDYLCVKVWDLHMESR-------PVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASP 298 (400)
Q Consensus 229 ~v~fSpd--g~~las-~~D~tIklWD~~~~~~-------~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~ 298 (400)
+++|+|+ +.+|++ +.|++|+|||++.+.. ++..+.+
T Consensus 202 ~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~---------------------------------- 247 (330)
T 2hes_X 202 SSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD---------------------------------- 247 (330)
T ss_dssp EEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCS----------------------------------
T ss_pred EEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccc----------------------------------
Confidence 9999999 778886 4799999999975421 1222221
Q ss_pred cceeccccccceEEEEEcCCCcEEeeccc---c-------------hhhccccc-ceeEEEEcc--CCCEEEEe-cCCeE
Q psy12356 299 RRIFANAHTYHINSISVNSDQLTVEASPR---G-------------IFADAHTY-HISSTSVNS--DQETYLSA-DDLRI 358 (400)
Q Consensus 299 ~~~~~~~~~~~i~~i~~s~dg~~~~~~~~---~-------------~~~~gh~~-~V~~i~fsp--Dg~~las~-~D~~i 358 (400)
.|...|.+++|+|++.+++++.. + ....+|.. .|++++|+| |+++|||+ .|++|
T Consensus 248 ------~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v 321 (330)
T 2hes_X 248 ------VHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIV 321 (330)
T ss_dssp ------CCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEE
T ss_pred ------ccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcE
Confidence 13334444444443322221110 0 01136876 899999999 79999997 79999
Q ss_pred EEEeCcc
Q psy12356 359 NLWHLEI 365 (400)
Q Consensus 359 ~lW~~~~ 365 (400)
+||+++.
T Consensus 322 ~~W~~~~ 328 (330)
T 2hes_X 322 NFWSLEK 328 (330)
T ss_dssp EEEEC--
T ss_pred EEEEecc
Confidence 9999864
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=282.52 Aligned_cols=313 Identities=11% Similarity=0.093 Sum_probs=220.9
Q ss_pred eeEEEEEECCCCC-eEEEe----------cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceee
Q psy12356 4 YMREASQRFSDGE-LLATG----------DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN 72 (400)
Q Consensus 4 ~~v~~v~fspdG~-~Las~----------s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~ 72 (400)
..|.+++|||||+ +||+| +.|++|+|||+.++.. .+++..+ .|. ..|.
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~--------~~~~~~~-~~~------------~~v~ 71 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADS--------EKPIASL-QVD------------SKFN 71 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGG--------CSCSCCC-CCS------------SCEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCC--------CcEEEEE-ecC------------CceE
Confidence 4678999999997 99999 8999999999986421 1122222 343 4599
Q ss_pred EEEEEeccCCceEEEeeCCCeEEEEEccC----CC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc
Q psy12356 73 KIRWLRRKNQAHFLLSTNDQSFNIVDIKP----TN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC 144 (400)
Q Consensus 73 ~v~~sp~~~~~~~l~ss~D~tI~lWd~~~----~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~ 144 (400)
+++|+|++. .+++++.|++|+|||+.+ .. +..|...|++++|+|+++++|++++.|++|++||++++...
T Consensus 72 ~~~~s~~~~--~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 149 (416)
T 2pm9_A 72 DLDWSHNNK--IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTES 149 (416)
T ss_dssp EEEECSSSS--CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSC
T ss_pred EEEECCCCC--eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 999999874 677788999999999987 22 34577889999999985689999999999999999987410
Q ss_pred cc--ccceeccCc--ccceeceeccCchhhhhhcccC-cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccc
Q psy12356 145 DR--HSKCLIEGT--NCNCQGLIVPESKREERQSSQN-RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSF 219 (400)
Q Consensus 145 ~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
.. ......... ...+..+. ..++ ....++++.||.|++||++.+... ..+..+. .
T Consensus 150 ~~~~~~~~~~~~~~~~~~v~~~~----------~~~~~~~~l~~~~~dg~v~iwd~~~~~~~----~~~~~~~------~ 209 (416)
T 2pm9_A 150 PSNYTPLTPGQSMSSVDEVISLA----------WNQSLAHVFASAGSSNFASIWDLKAKKEV----IHLSYTS------P 209 (416)
T ss_dssp TTTCCCBCCCCSCCSSCCCCEEE----------ECSSCTTEEEEESSSSCEEEEETTTTEEE----EEECCCC------C
T ss_pred cccccccccccccCCCCCeeEEE----------eCCCCCcEEEEEcCCCCEEEEECCCCCcc----eEEeccc------c
Confidence 00 000000000 01112222 2344 455666778999999999876532 2221110 0
Q ss_pred ccccccCeEEEEECCCC-cEEEEe-cCC---eEEEEeCCCCCCceeeec-CCC-------cCC-CCccc-CCCCCceeec
Q psy12356 220 FSEIISSISDVKISNSG-RYMISR-DYL---CVKVWDLHMESRPVETYP-THT-------KEE-NGQLR-DPSNITALRV 284 (400)
Q Consensus 220 ~~~h~~~V~~v~fSpdg-~~las~-~D~---tIklWD~~~~~~~l~~~~-~h~-------~~~-~g~~~-~~~~~~~i~l 284 (400)
..+|...|.+++|+|++ ++++++ .|+ +|++||++++..++..+. +|. +.+ ++.++ +++.++++++
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~ 289 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLL 289 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEE
T ss_pred ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEE
Confidence 12446789999999997 577764 577 999999998766778888 785 456 77765 5778899999
Q ss_pred CcccccceeeccCccceeccccccceEEEEEcCCC-cEEeeccc----chhh----------c-----------------
Q psy12356 285 PQIKPIELTVEASPRRIFANAHTYHINSISVNSDQ-LTVEASPR----GIFA----------D----------------- 332 (400)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg-~~~~~~~~----~~~~----------~----------------- 332 (400)
|++...+. ...+ .+|...|.+++|+||+ +++++.+. ++|. .
T Consensus 290 wd~~~~~~------~~~~-~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (416)
T 2pm9_A 290 WNPESAEQ------LSQF-PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNV 362 (416)
T ss_dssp ECSSSCCE------EEEE-ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC------------------
T ss_pred eeCCCCcc------ceee-cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccc
Confidence 98754332 1222 4688899999999999 77775432 1110 0
Q ss_pred c------------------cccceeEEEEccCCCEEEEe-cCCeEEEEeCccC
Q psy12356 333 A------------------HTYHISSTSVNSDQETYLSA-DDLRINLWHLEIT 366 (400)
Q Consensus 333 g------------------h~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~ 366 (400)
+ |...|.+++|||||++||++ .|++|+||++.++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 363 SREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp ----CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 1 67788899999999999997 6999999998853
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-33 Score=270.11 Aligned_cols=283 Identities=10% Similarity=0.100 Sum_probs=186.6
Q ss_pred eeEEEEEECCCC-CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe-ccC
Q psy12356 4 YMREASQRFSDG-ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR-RKN 81 (400)
Q Consensus 4 ~~v~~v~fspdG-~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp-~~~ 81 (400)
..|++++|+|+| ++||+|+.||+|+|||+.+.. ......+.+|. ..|.+++|+| ++
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~h~------------~~v~~~~~~~~~~- 131 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN---------KTSFIQGMGPG------------DAITGMKFNQFNT- 131 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT---------CEEEECCCSTT------------CBEEEEEEETTEE-
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc---------cceeeecCCcC------------CceeEEEeCCCCC-
Confidence 468999999999 999999999999999998642 11111223565 4599999999 43
Q ss_pred CceEEEeeCCCeEEEEEccCCCcc------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTNME------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~~~------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
..+++++.|++|++||+.+.... .+...|.+++|+|++ ++|++++.|++|++||++...+ .. +...
T Consensus 132 -~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~-~~----~~~h- 203 (383)
T 3ei3_B 132 -NQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGLDGHEI-FK----EKLH- 203 (383)
T ss_dssp -EEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEETTSCEE-EE----EECS-
T ss_pred -CEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEECCCCEE-EE----eccC-
Confidence 26777889999999999865421 233679999999985 7999999999999999954311 11 0000
Q ss_pred ccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
...+..+. ..+++. ..++++.|++|++||+++......... ..+|...|.+++|+|
T Consensus 204 ~~~v~~~~----------~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------------~~~~~~~v~~~~~s~ 260 (383)
T 3ei3_B 204 KAKVTHAE----------FNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA-------------EMPHEKPVNAAYFNP 260 (383)
T ss_dssp SSCEEEEE----------ECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEE-------------EEECSSCEEEEEECT
T ss_pred CCcEEEEE----------ECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEE-------------EecCCCceEEEEEcC
Confidence 01122222 235554 566677899999999997432111111 115778999999999
Q ss_pred -CCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEE
Q psy12356 235 -SGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINS 312 (400)
Q Consensus 235 -dg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 312 (400)
+|++|+++ .|++|+|||++++. +++.+.+|.....+. ...++. .+ ..+..+..
T Consensus 261 ~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~------~~~~~~-~~-----------------~p~~~~~~ 315 (383)
T 3ei3_B 261 TDSTKLLTTDQRNEIRVYSSYDWS-KPDQIIIHPHRQFQH------LTPIKA-TW-----------------HPMYDLIV 315 (383)
T ss_dssp TTSCEEEEEESSSEEEEEETTBTT-SCSEEEECCBCCCTT------SCCCCC-EE-----------------CSSSSEEE
T ss_pred CCCCEEEEEcCCCcEEEEECCCCc-ccccccccccccccc------ccceEE-ec-----------------cCCCCceE
Confidence 99999974 68999999999874 456666553211000 000000 00 01112333
Q ss_pred EEEcCCCcEEeeccc--------------chhh-cccccceeEEEEccCCCEEEEecCCeEEEEeCcc
Q psy12356 313 ISVNSDQLTVEASPR--------------GIFA-DAHTYHISSTSVNSDQETYLSADDLRINLWHLEI 365 (400)
Q Consensus 313 i~~s~dg~~~~~~~~--------------~~~~-~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~ 365 (400)
++|+|||++ .++.. ..+. .+|...+..++|+|||++||++.|++|+||+++.
T Consensus 316 ~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 316 AGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp EECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred EEecCCccc-ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence 444444443 21110 0011 2367788888999999999998899999999874
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-33 Score=292.76 Aligned_cols=295 Identities=13% Similarity=0.108 Sum_probs=198.2
Q ss_pred eeEEEEEECCCC-CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDG-ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG-~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..|++|+|+|++ ++|||||.|++|+|||+.+.... .....+.+.+|.. .|.+++|+|+++
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~------~~~~~~~~~~h~~------------~v~~v~~s~~g~- 443 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA------YGVAQRRLTGHSH------------FVEDVVLSSDGQ- 443 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC------SCEEEEEEECCSS------------CEEEEEECTTSS-
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc------cccccceecCCCC------------cEEEEEECCCCC-
Confidence 469999999865 79999999999999998754211 1123457788873 599999999874
Q ss_pred ceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++++.|++|+|||+.++. +..|...|.+++|+|++ ++|++++.|++|++||+......... .....+ ...
T Consensus 444 -~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~-~~~~~h-~~~ 519 (694)
T 3dm0_A 444 -FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTIS-EGGEGH-RDW 519 (694)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEEC-SSTTSC-SSC
T ss_pred -EEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeec-cCCCCC-CCc
Confidence 67788999999999998876 34678899999999985 78999999999999998655211000 000000 001
Q ss_pred eeceeccCchhhhhhcccCc--ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 159 CQGLIVPESKREERQSSQNR--REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
+..+.+ +++. ...++++.|++|++||++..... ..+.+|.+.|.+|+|||+|
T Consensus 520 v~~~~~----------~~~~~~~~l~s~s~d~~v~vwd~~~~~~~----------------~~~~~h~~~v~~v~~spdg 573 (694)
T 3dm0_A 520 VSCVRF----------SPNTLQPTIVSASWDKTVKVWNLSNCKLR----------------STLAGHTGYVSTVAVSPDG 573 (694)
T ss_dssp EEEEEE----------CSCSSSCEEEEEETTSCEEEEETTTCCEE----------------EEECCCSSCEEEEEECTTS
T ss_pred EEEEEE----------eCCCCcceEEEEeCCCeEEEEECCCCcEE----------------EEEcCCCCCEEEEEEeCCC
Confidence 111222 2332 34566678999999999865431 1134788999999999999
Q ss_pred cEEEEe-cCCeEEEEeCCCCCCceeeecCCC------cCCCCcccCCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 237 RYMISR-DYLCVKVWDLHMESRPVETYPTHT------KEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 237 ~~las~-~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
++|+++ .|++|+|||++++. ++..+..+. +++++.+++.+.+..|++|++....... .+. .+..
T Consensus 574 ~~l~sg~~Dg~i~iwd~~~~~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~------~~~-~~~~- 644 (694)
T 3dm0_A 574 SLCASGGKDGVVLLWDLAEGK-KLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVE------DLK-VDLK- 644 (694)
T ss_dssp SEEEEEETTSBCEEEETTTTE-EEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE------EEC-CCCC-
T ss_pred CEEEEEeCCCeEEEEECCCCc-eEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChh------hhc-cccc-
Confidence 999975 69999999999863 566665543 4677776655556668888775432211 000 0000
Q ss_pred eEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 310 INSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
......+. .. ......|...|++++|||||++|+|+ .|++||||++.
T Consensus 645 --~~~~~~~~-----~~-~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 645 --AEAEKADN-----SG-PAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ------------------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred --cccccccc-----cc-cccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 00000000 00 00001234458899999999999997 79999999985
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=269.17 Aligned_cols=324 Identities=10% Similarity=0.038 Sum_probs=214.5
Q ss_pred eeEEEEEECCCCC-eEEEecCCCeEEEEEc----CCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 4 YMREASQRFSDGE-LLATGDKGGRVVIFQR----DPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 4 ~~v~~v~fspdG~-~Las~s~Dg~I~iwd~----~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
..|++++|+|||+ +||+|+.||+|+|||+ .++...... .....+...+.+|.. ...+...|.+++|+|
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~ 118 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKL-TIIAELRHPFALSAS------SGKTTNQVTCLAWSH 118 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEE-EEEEEEECCCCCC------------CBCEEEEEECT
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccc-ccccccccccccccc------ccCCCCceEEEEEcC
Confidence 4689999999999 9999999999999999 654310000 000011112222200 001224699999999
Q ss_pred ccCCceEEEeeCCCeEEEEEccCCC---cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 79 RKNQAHFLLSTNDQSFNIVDIKPTN---MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 79 ~~~~~~~l~ss~D~tI~lWd~~~~~---~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
+++ .+++++.|++|+|||..... +..|...|.+++|+|++ ++|++++.|+.|++||++++.............
T Consensus 119 ~~~--~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~- 194 (425)
T 1r5m_A 119 DGN--SIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGTVMQHFELKETGG- 194 (425)
T ss_dssp TSS--EEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred CCC--EEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCcEEEEeeccccCc-
Confidence 864 67778899999999943332 34567889999999975 789999999999999998885432211100000
Q ss_pred ccceeceeccC--chhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 156 NCNCQGLIVPE--SKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 156 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
.......... .....+...++.. .+.++.||.|++||++.+... .. +.+|...|.+++|+
T Consensus 195 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~d~~~~~~~----~~------------~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 195 -SSINAENHSGDGSLGVDVEWVDDDK-FVIPGPKGAIFVYQITEKTPT----GK------------LIGHHGPISVLEFN 256 (425)
T ss_dssp ------------CCCBSCCEEEETTE-EEEECGGGCEEEEETTCSSCS----EE------------ECCCSSCEEEEEEE
T ss_pred -cceeeccccCCcceeeEEEEcCCCE-EEEEcCCCeEEEEEcCCCcee----ee------------eccCCCceEEEEEC
Confidence 0000000000 0000111123332 344567999999999875321 11 23677899999999
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCcccCCCCCceeecCcccccceeeccCccceeccc
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANA 305 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~ 305 (400)
|++++|+++ .|++|++||++++ .++..+.+|. +.++|.+++.+.++.+++|++...+.. .. ...
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~------~~-~~~ 328 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNG-NSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLL------AL-SIV 328 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSB-SCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEE------EE-EEC
T ss_pred CCCCEEEEEcCCCEEEEEECCCC-ccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEe------Ee-ccc
Confidence 999999875 6899999999986 4677887774 457775556788899999987543321 12 245
Q ss_pred cccceEEEEEcCCCcEEeeccc------------c--------------------hh--hccccc--ceeEEEEccCCCE
Q psy12356 306 HTYHINSISVNSDQLTVEASPR------------G--------------------IF--ADAHTY--HISSTSVNSDQET 349 (400)
Q Consensus 306 ~~~~i~~i~~s~dg~~~~~~~~------------~--------------------~~--~~gh~~--~V~~i~fspDg~~ 349 (400)
|...|.+++|+|||+++++... . .. ..+|.. .|++++|+|||++
T Consensus 329 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 408 (425)
T 1r5m_A 329 DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNK 408 (425)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSE
T ss_pred CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCce
Confidence 7888999999999998875331 1 11 136765 9999999999999
Q ss_pred EEEe-cCCeEEEEeCc
Q psy12356 350 YLSA-DDLRINLWHLE 364 (400)
Q Consensus 350 las~-~D~~i~lW~~~ 364 (400)
||++ .|++|++|+++
T Consensus 409 l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 409 ISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEESSSCCEEEECC
T ss_pred EEEEecCceEEEEeec
Confidence 9997 79999999986
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=261.51 Aligned_cols=324 Identities=11% Similarity=0.072 Sum_probs=209.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|||++||+|+.|++|+|||+.++ ..+.+..+.+|. ..|.+++|+|+++
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~---------~~~~~~~~~~h~------------~~v~~~~~~~~~~-- 65 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGN---------KWVQVHELKEHN------------GQVTGVDWAPDSN-- 65 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETT---------EEEEEEEEECCS------------SCEEEEEEETTTT--
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC---------cEEeeeeecCCC------------CcccEEEEeCCCC--
Confidence 46899999999999999999999999998753 223566788887 3599999999864
Q ss_pred eEEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
.+++++.|++|++||+++++. ..+...|.+++|+|++ ++|++++.|+.|++||++.+...... .........
T Consensus 66 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~-~~~~~~~~~ 143 (372)
T 1k8k_C 66 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVC-KHIKKPIRS 143 (372)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEE-EEECTTCCS
T ss_pred EEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceee-eeeecccCC
Confidence 777889999999999988752 3466789999999985 79999999999999999887421000 000000011
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCC--CCCCcccccccccCeEEEEECCC
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPE--DPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~--~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
.+..+. ..+++...++++.||.|++||++................ .......+.+|...|.+++|+|+
T Consensus 144 ~i~~~~----------~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 213 (372)
T 1k8k_C 144 TVLSLD----------WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN 213 (372)
T ss_dssp CEEEEE----------ECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS
T ss_pred CeeEEE----------EcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCC
Confidence 122222 235555566667899999999864322111000000000 00011124478889999999999
Q ss_pred CcEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCcccCCCCCceeecCcccc--cceeeccCccceeccc
Q psy12356 236 GRYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLRDPSNITALRVPQIKP--IELTVEASPRRIFANA 305 (400)
Q Consensus 236 g~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~~~~~~~~i~l~~~~~--~~~~~~~~~~~~~~~~ 305 (400)
+++|++ +.|++|++||++++ .++..+.+|. +.++|++++.+.++.+++|++.. ......... ..
T Consensus 214 ~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~-----~~ 287 (372)
T 1k8k_C 214 GSRVAWVSHDSTVCLADADKK-MAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRL-----DV 287 (372)
T ss_dssp SSEEEEEETTTEEEEEEGGGT-TEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCC-----CC
T ss_pred CCEEEEEeCCCEEEEEECCCC-ceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeecc-----Cc
Confidence 999987 46899999999986 4788888874 45778876555788888887754 111110000 00
Q ss_pred cccceEE----EE-E---cCCCcEEeec-ccchhhcccccceeEEEEc-cCC---CEEEEe-cCCeEEEEeCccCCe
Q psy12356 306 HTYHINS----IS-V---NSDQLTVEAS-PRGIFADAHTYHISSTSVN-SDQ---ETYLSA-DDLRINLWHLEITDQ 368 (400)
Q Consensus 306 ~~~~i~~----i~-~---s~dg~~~~~~-~~~~~~~gh~~~V~~i~fs-pDg---~~las~-~D~~i~lW~~~~~~~ 368 (400)
+...... +. | ...++...+. .......+|...|++++|+ +|| ++|+|+ .|++|++|++...++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 288 PKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp C--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred cccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 0000000 00 0 0001000000 0011124899999999955 777 999997 699999999876443
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=270.71 Aligned_cols=322 Identities=14% Similarity=0.114 Sum_probs=190.5
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|||++||+|+.|++|+|||+.++ ..+....+.+|. ..|.+++|+|+++
T Consensus 12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~---------~~~~~~~~~~h~------------~~v~~~~~s~~~~-- 68 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDGN---------GWKHARTFSDHD------------KIVTCVDWAPKSN-- 68 (377)
T ss_dssp SCCSCCEECSSSSEEECCCSSSCBCEEEEETT---------EEEECCCBCCCS------------SCEEEEEECTTTC--
T ss_pred CcEEEEEECCCCCEEEEecCCCEEEEEEccCC---------ceEEEEEEecCC------------ceEEEEEEeCCCC--
Confidence 45899999999999999999999999999753 123456778887 4599999999864
Q ss_pred eEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.+++++.|++|+|||+.++. +..|...|++++|+|++ ++|++++.|++|++||++++...... ..+...-.
T Consensus 69 ~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~h~ 146 (377)
T 3dwl_C 69 RIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVS-KHLKRPLR 146 (377)
T ss_dssp CEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCC-EEECSSCC
T ss_pred EEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceee-eEeecccC
Confidence 77788999999999998765 23567789999999975 78999999999999999987420000 00111001
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCC--CCcccccccccCeEEEEECC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDP--TNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~v~fSp 234 (400)
..+..+. ..+++...++++.|++|++||++.............+...+ .....+ +|...|.+++|+|
T Consensus 147 ~~v~~~~----------~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp 215 (377)
T 3dwl_C 147 STILSLD----------WHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP 215 (377)
T ss_dssp SCEEEEE----------ECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT
T ss_pred CCeEEEE----------EcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC
Confidence 1122222 23566566677789999999997543221110000000000 001113 7888999999999
Q ss_pred CCcEEEEe-cCCeEEEEeCCCCCCc---eeeecCCC-------cCCCCcccC-CCCCceeecCcccccceeeccCcccee
Q psy12356 235 SGRYMISR-DYLCVKVWDLHMESRP---VETYPTHT-------KEENGQLRD-PSNITALRVPQIKPIELTVEASPRRIF 302 (400)
Q Consensus 235 dg~~las~-~D~tIklWD~~~~~~~---l~~~~~h~-------~~~~g~~~~-~~~~~~i~l~~~~~~~~~~~~~~~~~~ 302 (400)
+|++|+++ .|++|+|||++++..+ +..+.+|. +.++|++++ ++.++.+ +|................
T Consensus 216 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 293 (377)
T 3dwl_C 216 SGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAG- 293 (377)
T ss_dssp TSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSC-
T ss_pred CCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccc-
Confidence 99999874 7899999999987532 66777775 457888764 4444444 554432221111110000
Q ss_pred ccccc-----------cceEEEEEcCCCcEEeecc-------cchhhcccccceeEEEEccCC-C---EEEEe-cCCeEE
Q psy12356 303 ANAHT-----------YHINSISVNSDQLTVEASP-------RGIFADAHTYHISSTSVNSDQ-E---TYLSA-DDLRIN 359 (400)
Q Consensus 303 ~~~~~-----------~~i~~i~~s~dg~~~~~~~-------~~~~~~gh~~~V~~i~fspDg-~---~las~-~D~~i~ 359 (400)
..... ..+..+.|++....+.... ......+|.+.|++|++.+++ . .|+|+ .|++|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~ 373 (377)
T 3dwl_C 294 TSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVV 373 (377)
T ss_dssp CCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEE
T ss_pred ccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEE
Confidence 00000 1123333333222111100 001123699999999976654 3 58886 699999
Q ss_pred EEeC
Q psy12356 360 LWHL 363 (400)
Q Consensus 360 lW~~ 363 (400)
|||+
T Consensus 374 iWdl 377 (377)
T 3dwl_C 374 LWTL 377 (377)
T ss_dssp EECC
T ss_pred EecC
Confidence 9985
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-31 Score=255.46 Aligned_cols=290 Identities=15% Similarity=0.106 Sum_probs=190.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|||++||+|+.||.|+|||+.++ +.+..+.+|. ..|.+++|+|+++
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-----------~~~~~~~~h~------------~~v~~~~~~~~~~-- 87 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG-----------ERLGTLDGHT------------GTIWSIDVDCFTK-- 87 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTC-----------CEEEEECCCS------------SCEEEEEECTTSS--
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc-----------hhhhhhhhcC------------CcEEEEEEcCCCC--
Confidence 46999999999999999999999999998754 2456788887 3599999999864
Q ss_pred eEEEeeCCCeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEeCC-----CeEEEEecccccccccccc----ee
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSSSK-----GTIRLCDMRAAALCDRHSK----CL 151 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s~D-----g~i~lWD~~~~~~~~~~~~----~~ 151 (400)
.+++++.|++|++||+.+++. ..+...|.+++|+|++ ..+++++.+ +.|++||++.+........ ..
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 88 YCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceeeccccccee
Confidence 777889999999999998873 2356789999999985 789999998 9999999988743211000 00
Q ss_pred ccCcc----cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 152 IEGTN----CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 152 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
..... ..+..+ ...+++...+.++.||.|++||+++.... ... +..|...|
T Consensus 167 ~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~------------~~~~~~~v 221 (369)
T 3zwl_B 167 HKIITHEGLDAATVA----------GWSTKGKYIIAGHKDGKISKYDVSNNYEY---VDS------------IDLHEKSI 221 (369)
T ss_dssp EEEECCTTCCCEEEE----------EECGGGCEEEEEETTSEEEEEETTTTTEE---EEE------------EECCSSCE
T ss_pred eeccCCcCccceeEE----------EEcCCCCEEEEEcCCCEEEEEECCCCcEe---EEE------------EecCCCce
Confidence 00000 011111 22355555666678999999999863211 111 33577899
Q ss_pred EEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC------cCCCCcccC-CCCCceeecCcccccceeeccCcc
Q psy12356 228 SDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT------KEENGQLRD-PSNITALRVPQIKPIELTVEASPR 299 (400)
Q Consensus 228 ~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~~~-~~~~~~i~l~~~~~~~~~~~~~~~ 299 (400)
.+++|+|++++|+++ .|++|++||++++. ++..+..+. +.++++++. ++.++...++.....
T Consensus 222 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--------- 291 (369)
T 3zwl_B 222 SDMQFSPDLTYFITSSRDTNSFLVDVSTLQ-VLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSAN--------- 291 (369)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCC-EEEEEECSSCEEEEEECSSSSEEEEEECCC-------------------
T ss_pred eEEEECCCCCEEEEecCCceEEEEECCCCc-eeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecC---------
Confidence 999999999999874 68999999999863 555554221 123333211 111111111110000
Q ss_pred ceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccC
Q psy12356 300 RIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEIT 366 (400)
Q Consensus 300 ~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~ 366 (400)
.....+.-+... .++.+ . ...+|...|.+++|+|||++||++ .|++|++|+++..
T Consensus 292 -----~~~~~i~~~d~~-~~~~~-----~-~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 292 -----EGKFEARFYHKI-FEEEI-----G-RVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp --------CEEEEEETT-TCCEE-----E-EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred -----CCcceeEEEecC-CCcch-----h-heecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 000001000000 01110 0 114899999999999999999997 6999999999753
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=263.51 Aligned_cols=292 Identities=14% Similarity=0.133 Sum_probs=203.1
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+....|+|||++||+|+.||+|+|||+.++ +....+.+|. ..|.+++|+|++. .
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----------~~~~~~~~h~------------~~v~~~~~~~~~~--~ 153 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFN-----------LQREIDQAHV------------SEITKLKFFPSGE--A 153 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSC-----------EEEEETTSSS------------SCEEEEEECTTSS--E
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCc-----------ceeeeccccc------------CccEEEEECCCCC--E
Confidence 3455678999999999999999999998743 2345666776 4599999999864 7
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++++.|++|++||+.+++ +..|...|++++|+|++ ++|++++.|++|++||++++........+.. ....+.
T Consensus 154 l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~v~ 230 (420)
T 3vl1_A 154 LISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRKEN--PHDGVN 230 (420)
T ss_dssp EEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBTTB--TTCCEE
T ss_pred EEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecCCC--CCCCcc
Confidence 7788999999999998876 34577889999999985 7899999999999999998854322111000 000011
Q ss_pred ceecc-----------CchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEE
Q psy12356 161 GLIVP-----------ESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISD 229 (400)
Q Consensus 161 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 229 (400)
.+.+. ......+...+++...++++.||.|++||++++.... .+ ..+|...|.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~----~~-----------~~~~~~~v~~ 295 (420)
T 3vl1_A 231 SIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI----QL-----------PSKFTCSCNS 295 (420)
T ss_dssp EEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE----EE-----------CCTTSSCEEE
T ss_pred EEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeE----Ec-----------ccccCCCcee
Confidence 11110 0111223345677667777889999999998764321 11 1256788999
Q ss_pred EEECCCCc-EEEE-ecCCeEEEEeCCCCCCceeeecCC-C------cCCCCcc-cCCCCCceeecCcccccceeeccCcc
Q psy12356 230 VKISNSGR-YMIS-RDYLCVKVWDLHMESRPVETYPTH-T------KEENGQL-RDPSNITALRVPQIKPIELTVEASPR 299 (400)
Q Consensus 230 v~fSpdg~-~las-~~D~tIklWD~~~~~~~l~~~~~h-~------~~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~ 299 (400)
++|+|+++ +|++ +.|++|++||++++..++..+.+| . ..+++++ ++++.++++++|++...+. .+
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~-----~~ 370 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPES-----ER 370 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTC-----CS
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCC-----Cc
Confidence 99999999 8886 468999999999876667887764 2 2345554 4567788888887643211 00
Q ss_pred ceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCC----EEEEecCCeEEEEeCcc
Q psy12356 300 RIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQE----TYLSADDLRINLWHLEI 365 (400)
Q Consensus 300 ~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~----~las~~D~~i~lW~~~~ 365 (400)
.+. ..+. .....+|...|.+++|+|||+ .++++.++.+++|+++.
T Consensus 371 ~~~------------~~~~---------~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 371 PAI------------EFET---------PTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CEE------------CTTS---------CEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cce------------eccC---------ccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 000 0000 001137888999999999999 45556899999999863
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-32 Score=262.84 Aligned_cols=231 Identities=10% Similarity=0.051 Sum_probs=169.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+|+|+||+ +|++|+.||+|+|||+.+++. .......+.+|+ ..|++|+|+|+++ .
T Consensus 84 ~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~-------~~~~~~~~~~H~------------~~V~~v~~spdg~--~ 141 (344)
T 4gqb_B 84 GVADLTWVGER-GILVASDSGAVELWELDENET-------LIVSKFCKYEHD------------DIVSTVSVLSSGT--Q 141 (344)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEEECTTSS-------CEEEEEEEECCS------------SCEEEEEECTTSS--E
T ss_pred CEEEEEEeCCC-eEEEEECCCEEEEEeccCCCc-------eeEeeccccCCC------------CCEEEEEECCCCC--E
Confidence 48999999996 678999999999999986531 111122345776 4599999999874 7
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++++.|++|+|||+++++ +..|...|++++|+|++..+|++++.|++|++||+++++......... ......
T Consensus 142 l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~---~~~~~~ 218 (344)
T 4gqb_B 142 AVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA---PGYLPT 218 (344)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------CCCEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecce---eeccce
Confidence 7788999999999999887 356788999999999987789999999999999999884322110000 001111
Q ss_pred ceeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC-cE
Q psy12356 161 GLIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG-RY 238 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg-~~ 238 (400)
.+.+ .+ +....++++.||+|++||+++++.. +. +.+|...|.+|+|||+| ++
T Consensus 219 ~~~~----------~p~~~~~l~sg~~dg~v~~wd~~~~~~~----~~------------~~~h~~~v~~v~fsp~g~~~ 272 (344)
T 4gqb_B 219 SLAW----------HPQQSEVFVFGDENGTVSLVDTKSTSCV----LS------------SAVHSQCVTGLVFSPHSVPF 272 (344)
T ss_dssp EEEE----------CSSCTTEEEEEETTSEEEEEESCC--CC----EE------------EECCSSCEEEEEECSSSSCC
T ss_pred eeee----------cCCCCcceEEeccCCcEEEEECCCCcEE----EE------------EcCCCCCEEEEEEccCCCeE
Confidence 1222 23 3445666778999999999976532 11 34788999999999998 47
Q ss_pred EEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCcc-c-CCCCCceeecCccc
Q psy12356 239 MIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQL-R-DPSNITALRVPQIK 288 (400)
Q Consensus 239 las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~-~-~~~~~~~i~l~~~~ 288 (400)
||+ +.|++|+|||++++. +..+.+|. ++|+|+. + +++.|++|++|++.
T Consensus 273 lasgs~D~~i~vwd~~~~~--~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 273 LASLSEDCSLAVLDSSLSE--LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEEEETTSCEEEECTTCCE--EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEEeCCCeEEEEECCCCc--EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 876 479999999999763 45678885 5677763 3 46788888888764
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=298.39 Aligned_cols=321 Identities=14% Similarity=0.172 Sum_probs=228.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|||||++||+|+.||+|+|||+.++ +.+.++.+|. ..|.+++|+|++.
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~-----------~~~~~~~~h~------------~~v~~~~~s~~~~-- 670 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETG-----------EKLLDIKAHE------------DEVLCCAFSSDDS-- 670 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTC-----------CEEEEECCCS------------SCEEEEEECTTSS--
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCC-----------CEEEEeccCC------------CCEEEEEEecCCC--
Confidence 56999999999999999999999999999864 2456788887 3599999999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCC-CCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++++.|++|+|||+.+++. ..|...|++++|+|++ ..++++++.|++|++||++++........ . ...
T Consensus 671 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~----h-~~~ 745 (1249)
T 3sfz_A 671 YIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG----H-TNS 745 (1249)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC----C-SSC
T ss_pred EEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC----C-CCC
Confidence 677788999999999998873 4677889999999953 45889999999999999998843221110 0 011
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcc----------------------------------
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRH---------------------------------- 204 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~---------------------------------- 204 (400)
+..+. +++++...++++.||+|++||++++......
T Consensus 746 v~~~~----------~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 815 (1249)
T 3sfz_A 746 VNHCR----------FSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIV 815 (1249)
T ss_dssp EEEEE----------ECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEE
T ss_pred EEEEE----------EecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEE
Confidence 22222 2356666667778999999999875431100
Q ss_pred -----cccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCC
Q psy12356 205 -----SKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENG 271 (400)
Q Consensus 205 -----~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g 271 (400)
+..|.............+|...|.+++|+|++++++++ .|++|++||+.++ .++..+.+|. +.++|
T Consensus 816 ~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~h~~~v~~v~~spdg 894 (1249)
T 3sfz_A 816 AAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR-LKVADCRGHLSWVHGVMFSPDG 894 (1249)
T ss_dssp EETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTS
T ss_pred EcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceeeecCCCccceEEEEECCCC
Confidence 00000000000001122677899999999999999975 6899999999986 4678888885 46788
Q ss_pred cc-cCCCCCceeecCccccccee-------------------------------eccCccceeccccccceEEEEEcCCC
Q psy12356 272 QL-RDPSNITALRVPQIKPIELT-------------------------------VEASPRRIFANAHTYHINSISVNSDQ 319 (400)
Q Consensus 272 ~~-~~~~~~~~i~l~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~i~~i~~s~dg 319 (400)
++ ++++.++++++|++...... ..+..... ...+...+.+++|+|+|
T Consensus 895 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~sp~g 973 (1249)
T 3sfz_A 895 SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQI-DYLPEAQVSCCCLSPHL 973 (1249)
T ss_dssp SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCE-EEECCSCEEEEEECTTS
T ss_pred CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceE-EEcccCcEEEEEEcCCC
Confidence 75 45788899999986421000 00000000 01134568999999999
Q ss_pred cEEeecccc----hh----------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccC
Q psy12356 320 LTVEASPRG----IF----------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEIT 366 (400)
Q Consensus 320 ~~~~~~~~~----~~----------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~ 366 (400)
++++..... .+ ..+|...|.+++|+|||++|+++ .|++|++|++..+
T Consensus 974 ~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 974 EYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp SEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTT
T ss_pred CEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 988754321 11 14899999999999999999997 6999999998763
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-31 Score=251.57 Aligned_cols=296 Identities=13% Similarity=0.116 Sum_probs=211.2
Q ss_pred eeeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 3 VYMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
...|.+++|||||++||++..++.+.+|.... ..+.+. ..+|. +.|.+++|+|+++
T Consensus 9 ~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~h~------------~~v~~~~~~~~~~- 64 (337)
T 1gxr_A 9 SKPAYSFHVTADGQMQPVPFPPDALIGPGIPR----------HARQIN-TLNHG------------EVVCAVTISNPTR- 64 (337)
T ss_dssp EEECCEEEECSSSCEEECCCCTTSSSSTTCCS----------EEEEEE-EECCS------------SCCCEEEECSSSS-
T ss_pred CCceeEEEECCCCCEEEeecCCCcEeccccCC----------ccccce-eccCC------------CceEEEEEecCCc-
Confidence 35688999999999999998888776665442 112222 23565 4599999999873
Q ss_pred ceEEEeeCCCeEEEEEccCCCc----c-----cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNM----E-----ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~----~-----~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
.+++++ |++|+|||+.++.. . .+...|++++|+|++ ++|++++.|+.|++||++++..... .....
T Consensus 65 -~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~--~~~~~ 139 (337)
T 1gxr_A 65 -HVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTPRIK--AELTS 139 (337)
T ss_dssp -EEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC--EEE--EEEEC
T ss_pred -EEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCccee--eeccc
Confidence 455555 99999999987641 1 456789999999975 7899999999999999988742100 00000
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
. ...+..+. ..+++...++++.||.|++||++++... .. +.+|...|.+++|+
T Consensus 140 ~-~~~i~~~~----------~~~~~~~l~~~~~dg~v~~~d~~~~~~~----~~------------~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 140 S-APACYALA----------ISPDSKVCFSCCSDGNIAVWDLHNQTLV----RQ------------FQGHTDGASCIDIS 192 (337)
T ss_dssp S-SSCEEEEE----------ECTTSSEEEEEETTSCEEEEETTTTEEE----EE------------ECCCSSCEEEEEEC
T ss_pred C-CCceEEEE----------ECCCCCEEEEEeCCCcEEEEeCCCCcee----ee------------eecccCceEEEEEC
Confidence 0 01112222 2355555556668999999999875432 11 23577889999999
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCCCCceeeecCC------CcCCCCccc-CCCCCceeecCcccccceeeccCccceeccc
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHMESRPVETYPTH------TKEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANA 305 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~~~~l~~~~~h------~~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~ 305 (400)
|++++|+++ .|++|++||++++. ++..+... .+.++|+++ .++.++.+++|++...+.. ...+
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~--------~~~~ 263 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLREGR-QLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY--------QLHL 263 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTE-EEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE--------EECC
T ss_pred CCCCEEEEEecCCcEEEEECCCCc-eEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE--------EEcC
Confidence 999999874 68999999999863 45555422 146788865 4667888999987543321 1246
Q ss_pred cccceEEEEEcCCCcEEeecccc----h---------hhcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 306 HTYHINSISVNSDQLTVEASPRG----I---------FADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 306 ~~~~i~~i~~s~dg~~~~~~~~~----~---------~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
|...|.+++|+|||+++++.... + ....|...|.+++|+|||++|+++ .|++|++|++
T Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 88899999999999988764321 1 123688999999999999999997 7999999986
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-32 Score=265.26 Aligned_cols=274 Identities=12% Similarity=0.159 Sum_probs=174.1
Q ss_pred eeEEEEEECCCCCeEEEecCCC-------eEEEEEcCCCCccccCCCCccee--eeeeeccCcchhhcccccccceeeEE
Q psy12356 4 YMREASQRFSDGELLATGDKGG-------RVVIFQRDPLSKTSIPKRGEYNV--YSTFQSHEPEFDYLKSLEIEEKINKI 74 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg-------~I~iwd~~~~~~~~~~~~~~~~~--~~~~~~h~~~~~~~~~~~~~~~V~~v 74 (400)
|-|++|+|+|||++||+|+.|. +|+||++....... ...... ...+.+|+ ..|.++
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~---~~~~~~~~~~~l~~~~------------~~v~s~ 79 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTE---KEQFHILSEFALEDND------------DSPTAI 79 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSH---HHHEEEEEEEECCTTS------------CCCCEE
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcce---eeeeeeeeEEEccCCC------------CceEEE
Confidence 5699999999999999997644 59999987543110 000000 11334444 346677
Q ss_pred EEEeccCCceEEE-----------eeCCCeEEEEEccCCCc--c-----------cccccEEEEEEecCCCCEEE--EEe
Q psy12356 75 RWLRRKNQAHFLL-----------STNDQSFNIVDIKPTNM--E-----------ELNEVITAAEFHPIDCNLFV--YSS 128 (400)
Q Consensus 75 ~~sp~~~~~~~l~-----------ss~D~tI~lWd~~~~~~--~-----------~~~~~V~sv~f~p~~~~~la--s~s 128 (400)
++.++ .+++ ++.|+++|+|++.++.. + .+...+.+++|+||| +++| +++
T Consensus 80 ~~~~~----~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg-~~la~as~~ 154 (365)
T 4h5i_A 80 DASKG----IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG-TVAAIASSK 154 (365)
T ss_dssp EEETT----EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS-SCEEEEESC
T ss_pred EeCCC----EEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC-CEEEEEECC
Confidence 66432 3333 34588999999876531 0 123458899999986 5655 445
Q ss_pred CCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccc
Q psy12356 129 SKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFF 208 (400)
Q Consensus 129 ~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~ 208 (400)
.|++|||||+.++...... .. ...+..+ .++|++...++++ ++.+++|+..++.....
T Consensus 155 ~d~~i~iwd~~~~~~~~~~-----~~-~~~V~~v----------~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~----- 212 (365)
T 4h5i_A 155 VPAIMRIIDPSDLTEKFEI-----ET-RGEVKDL----------HFSTDGKVVAYIT-GSSLEVISTVTGSCIAR----- 212 (365)
T ss_dssp SSCEEEEEETTTTEEEEEE-----EC-SSCCCEE----------EECTTSSEEEEEC-SSCEEEEETTTCCEEEE-----
T ss_pred CCCEEEEeECCCCcEEEEe-----CC-CCceEEE----------EEccCCceEEecc-ceeEEEEEeccCcceee-----
Confidence 6999999999988432210 00 0112223 3347776666655 45566666655432110
Q ss_pred cCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCC----eEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceee
Q psy12356 209 EEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYL----CVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALR 283 (400)
Q Consensus 209 ~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~----tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~ 283 (400)
....+|...|.+|+|+|||++++++ .|+ ++++||+...... ....+
T Consensus 213 ---------~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~--~~~~~------------------ 263 (365)
T 4h5i_A 213 ---------KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS--VLRSK------------------ 263 (365)
T ss_dssp ---------ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE--EEEEE------------------
T ss_pred ---------eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec--ceeee------------------
Confidence 0122577789999999999999864 454 6888988754211 10000
Q ss_pred cCcccccceeeccCccceeccccccceEEEEEcCCCcEEeeccc---------------chhhcccccceeEEEEccCCC
Q psy12356 284 VPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR---------------GIFADAHTYHISSTSVNSDQE 348 (400)
Q Consensus 284 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~---------------~~~~~gh~~~V~~i~fspDg~ 348 (400)
. ..+|...|++++|||||++|++++. +.+..||...|++|+|||||+
T Consensus 264 -----------------~-~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 264 -----------------Q-VTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST 325 (365)
T ss_dssp -----------------E-EESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC
T ss_pred -----------------e-ecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC
Confidence 0 1245556777777777777765332 112358999999999999999
Q ss_pred EEEEe-cCCeEEEEeCccC
Q psy12356 349 TYLSA-DDLRINLWHLEIT 366 (400)
Q Consensus 349 ~las~-~D~~i~lW~~~~~ 366 (400)
+|||+ .|++||||++...
T Consensus 326 ~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 326 YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEETTSEEEEEECCTT
T ss_pred EEEEEeCCCeEEEEEcCCC
Confidence 99997 7999999998643
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-31 Score=249.48 Aligned_cols=245 Identities=11% Similarity=0.120 Sum_probs=175.5
Q ss_pred eeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCE
Q psy12356 48 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNL 123 (400)
Q Consensus 48 ~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~ 123 (400)
+.++|.+|. +.|.+|+|+|+++ .+++++.|++|+|||++++. +..+...|.+++|+|++ ++
T Consensus 5 ~~~~~~~h~------------~~V~~~~fsp~~~--~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~ 69 (304)
T 2ynn_A 5 IKKTFSNRS------------DRVKGIDFHPTEP--WVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARK-NW 69 (304)
T ss_dssp CEEEEEEEC------------SCEEEEEECSSSS--EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG-TE
T ss_pred eEEeecCCC------------CceEEEEECCCCC--EEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCC-CE
Confidence 456888997 4599999999875 77788999999999998876 24566789999999985 79
Q ss_pred EEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCc
Q psy12356 124 FVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDR 203 (400)
Q Consensus 124 las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~ 203 (400)
|++++.|++|++||++++........+ ...+..+ ...|++...++++.|++|++||++.+....
T Consensus 70 l~s~s~d~~i~vwd~~~~~~~~~~~~h-----~~~v~~~----------~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~- 133 (304)
T 2ynn_A 70 IIVGSDDFRIRVFNYNTGEKVVDFEAH-----PDYIRSI----------AVHPTKPYVLSGSDDLTVKLWNWENNWALE- 133 (304)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECC-----SSCEEEE----------EECSSSSEEEEEETTSCEEEEEGGGTTEEE-
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeCC-----CCcEEEE----------EEcCCCCEEEEECCCCeEEEEECCCCcchh-
Confidence 999999999999999988543211110 0112222 234666667777899999999998653211
Q ss_pred ccccccCCCCCCCcccccccccCeEEEEECC-CCcEEEEe-cCCeEEEEeCCCCCCceeee-cCCC-------c--CCCC
Q psy12356 204 HSKFFEEPEDPTNKSFFSEIISSISDVKISN-SGRYMISR-DYLCVKVWDLHMESRPVETY-PTHT-------K--EENG 271 (400)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp-dg~~las~-~D~tIklWD~~~~~~~l~~~-~~h~-------~--~~~g 271 (400)
..+.+|...|.+++|+| ++.+|+++ .|++|+|||++.+.. ...+ .+|. + .+++
T Consensus 134 --------------~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~ 198 (304)
T 2ynn_A 134 --------------QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP-NFTLTTGQERGVNYVDYYPLPDK 198 (304)
T ss_dssp --------------EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC-SEEEECCCTTCEEEEEECCSTTC
T ss_pred --------------hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc-cceeccCCcCcEEEEEEEEcCCC
Confidence 11347888999999999 67888874 699999999987643 3333 2332 1 2355
Q ss_pred cc-cCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEE
Q psy12356 272 QL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETY 350 (400)
Q Consensus 272 ~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~l 350 (400)
++ ++++.+++|++|++...+. +. . ..||...|.+++|+|++++|
T Consensus 199 ~~l~s~s~D~~i~iWd~~~~~~-----------------~~-----------------~-~~~h~~~v~~~~~~p~~~~l 243 (304)
T 2ynn_A 199 PYMITASDDLTIKIWDYQTKSC-----------------VA-----------------T-LEGHMSNVSFAVFHPTLPII 243 (304)
T ss_dssp CEEEEEETTSEEEEEETTTTEE-----------------EE-----------------E-EECCSSCEEEEEECSSSSEE
T ss_pred CEEEEEcCCCeEEEEeCCCCcc-----------------ce-----------------e-eCCCCCCEEEEEECCCCCEE
Confidence 54 3466777777776532110 00 0 14899999999999999999
Q ss_pred EEe-cCCeEEEEeCccCCeeEEEEe
Q psy12356 351 LSA-DDLRINLWHLEITDQSFNIVD 374 (400)
Q Consensus 351 as~-~D~~i~lW~~~~~~~~~~~~~ 374 (400)
||+ .|++|+|||+.+.+ +.+.+.
T Consensus 244 ~s~s~Dg~i~iWd~~~~~-~~~~~~ 267 (304)
T 2ynn_A 244 ISGSEDGTLKIWNSSTYK-VEKTLN 267 (304)
T ss_dssp EEEETTSCEEEEETTTCC-EEEEEC
T ss_pred EEEcCCCeEEEEECCCCc-eeeecc
Confidence 997 69999999998644 444444
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-31 Score=287.19 Aligned_cols=159 Identities=13% Similarity=0.057 Sum_probs=117.4
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+|+|+| |++||+++.|++|+|||+.+++ .+.++. |. ..|++++|+|+++
T Consensus 59 ~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~-----------~~~~~~-~~------------~~V~~v~~sp~g~-- 111 (902)
T 2oaj_A 59 SAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK-----------VLTTVF-VP------------GKITSIDTDASLD-- 111 (902)
T ss_dssp CCEEEEEEET-TTEEEEEETTCEEEEEETTTCS-----------EEEEEE-CS------------SCEEEEECCTTCS--
T ss_pred CCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc-----------EEEEEc-CC------------CCEEEEEECCCCC--
Confidence 3589999999 8899999999999999998542 344554 32 3499999999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc---------------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM---------------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHS 148 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~---------------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~ 148 (400)
.+++++.|++|++||++++.+ +.|.+.|++++|+|++..++++++.|++| +||++++.....+.
T Consensus 112 ~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~ 190 (902)
T 2oaj_A 112 WMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFI 190 (902)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEEC
T ss_pred EEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEe
Confidence 777889999999999987653 23567899999999766789999999999 99999885432211
Q ss_pred ceeccC-----------c--ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccc
Q psy12356 149 KCLIEG-----------T--NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAAL 200 (400)
Q Consensus 149 ~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~ 200 (400)
.+.... . ...+.. +.++|++...++++.||+|++||+++++.
T Consensus 191 ~~~~~g~~~~~~~~~~~~~h~~~V~~----------v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 191 YELPPFAPGGDFSEKTNEKRTPKVIQ----------SLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp CCBCTTCCCSTTCCCTTSCBCCCEEE----------EEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred cccCCcCCCcccccccccccCCCeEE----------EEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 110000 0 011222 23457777777888999999999987653
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.1e-31 Score=292.38 Aligned_cols=314 Identities=18% Similarity=0.219 Sum_probs=215.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|||++||+|+.||+|+|||+.++ +.+.++.+|. ..|.+++|+|+++..
T Consensus 658 ~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~-----------~~~~~~~~~~------------~~v~~~~~~~~~~~~ 714 (1249)
T 3sfz_A 658 DEVLCCAFSSDDSYIATCSADKKVKIWDSATG-----------KLVHTYDEHS------------EQVNCCHFTNKSNHL 714 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----------CEEEEEECCS------------SCEEEEEECSSSSCC
T ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEECCCC-----------ceEEEEcCCC------------CcEEEEEEecCCCce
Confidence 46899999999999999999999999999864 3466788887 359999999976544
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccc----------
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSK---------- 149 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~---------- 149 (400)
.+++++.|++|++||+.++.+ ..|...|++++|+|++ +++++++.||+|++||++++........
T Consensus 715 ~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 793 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDP 793 (1249)
T ss_dssp EEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC------
T ss_pred EEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccccccCCc
Confidence 566788999999999998873 4677889999999985 7999999999999999988743211000
Q ss_pred ------eeccCc------------c--cceece-------ec---cCchhhhhhcccCcceeecCCCCCeEEEeeccccc
Q psy12356 150 ------CLIEGT------------N--CNCQGL-------IV---PESKREERQSSQNRREKEDNRRKPAIRLCDMRAAA 199 (400)
Q Consensus 150 ------~~~~~~------------~--~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~ 199 (400)
.+.... . ...+.+ .+ ..+....+.+++++...++++.||.|++||+.++.
T Consensus 794 ~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~ 873 (1249)
T 3sfz_A 794 PEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL 873 (1249)
T ss_dssp --CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE
T ss_pred cccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 000000 0 000000 00 00000112234566666777789999999998754
Q ss_pred ccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEe---------------------------
Q psy12356 200 LCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWD--------------------------- 251 (400)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD--------------------------- 251 (400)
.. .. +.+|...|.+++|+|+|++|++ +.|++|++||
T Consensus 874 ~~----~~------------~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1249)
T 3sfz_A 874 KV----AD------------CRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMV 937 (1249)
T ss_dssp EE----EE------------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEE
T ss_pred ee----ee------------cCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEE
Confidence 32 11 1244455555555555555554 2455555555
Q ss_pred ----------------------------------------------------CCCCCCceeeecCCC-------cCCCCc
Q psy12356 252 ----------------------------------------------------LHMESRPVETYPTHT-------KEENGQ 272 (400)
Q Consensus 252 ----------------------------------------------------~~~~~~~l~~~~~h~-------~~~~g~ 272 (400)
+.++ .++..+.+|. +.++|+
T Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~-~~~~~~~~h~~~v~~l~~s~dg~ 1016 (1249)
T 3sfz_A 938 LAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNN-RVFSSGVGHKKAVRHIQFTADGK 1016 (1249)
T ss_dssp EEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTT-SCEEECCCCSSCCCCEEECSSSS
T ss_pred EEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCC-ceeeecccCCCceEEEEECCCCC
Confidence 4433 2445556664 457887
Q ss_pred cc-CCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccc---hh----------hcccccce
Q psy12356 273 LR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRG---IF----------ADAHTYHI 338 (400)
Q Consensus 273 ~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~---~~----------~~gh~~~V 338 (400)
++ +++.++++++|++...+.. ...+|...|.++.++|++.+++++... +| ..+|...|
T Consensus 1017 ~l~s~~~dg~i~vwd~~~~~~~--------~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v 1088 (1249)
T 3sfz_A 1017 TLISSSEDSVIQVWNWQTGDYV--------FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTV 1088 (1249)
T ss_dssp CEEEECSSSBEEEEETTTTEEE--------CCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCC
T ss_pred EEEEEcCCCEEEEEECCCCceE--------EEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcE
Confidence 54 5778899999987543321 224688899999999999887654321 11 14799999
Q ss_pred eEEEEccCCCEEEEe-cCCeEEEEeCccC
Q psy12356 339 SSTSVNSDQETYLSA-DDLRINLWHLEIT 366 (400)
Q Consensus 339 ~~i~fspDg~~las~-~D~~i~lW~~~~~ 366 (400)
.+++|||||++|+++ .|++|++||+...
T Consensus 1089 ~~~~~s~d~~~l~s~s~d~~v~iwd~~~~ 1117 (1249)
T 3sfz_A 1089 LSCAISSDATKFSSTSADKTAKIWSFDLL 1117 (1249)
T ss_dssp CCEEECSSSSSCEEECCSSCCCEECSSSS
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCc
Confidence 999999999999997 6999999998754
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-30 Score=249.08 Aligned_cols=263 Identities=13% Similarity=0.158 Sum_probs=183.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|||++||+|+.||+|+|||+... ..+....+.+|.. .|.+++|+|+..+.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~---------~~~~~~~~~~h~~------------~v~~~~~~~~~~~~ 70 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE---------THKLIDTLTGHEG------------PVWRVDWAHPKFGT 70 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETT---------EEEEEEEECCCSS------------CEEEEEECCGGGCS
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCC---------cceeeeEecCCCC------------cEEEEEeCCCCCCC
Confidence 46999999999999999999999999999742 2345667888873 49999999873234
Q ss_pred eEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCC-CCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.+++++.|++|+|||+.+++ +..|...|++++|+|+. +.+|++++.|++|++||++.+...... ..... .
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~-~ 147 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI--IIDAH-A 147 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE--EEECC-T
T ss_pred EEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE--EecCC-C
Confidence 77788999999999998875 23466789999999972 478999999999999999887321110 00000 0
Q ss_pred cceeceeccCchh---hhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 157 CNCQGLIVPESKR---EERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 157 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
..+..+.+.+... ......+++...++++.||.|++||++.+....... ..+.+|...|.+++|+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------------~~~~~h~~~v~~~~~s 215 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE------------STLEGHSDWVRDVAWS 215 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEE------------EEECCCSSCEEEEEEC
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeE------------EEEecccCcEeEEEEC
Confidence 1122222221000 000001145556666789999999998654211111 1134688899999999
Q ss_pred CC---CcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 234 NS---GRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 234 pd---g~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
|+ +++|+++ .|++|+|||++++..+.... . ..
T Consensus 216 p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------------------------~-~~----- 251 (379)
T 3jrp_A 216 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKT--------------------------------------L-LK----- 251 (379)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEE--------------------------------------E-SS-----
T ss_pred CCCCCCCeEEEEeCCCEEEEEeCCCCCccceee--------------------------------------e-ec-----
Confidence 99 8999875 69999999998753211100 0 00
Q ss_pred eEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 310 INSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
..+|...|.+++|+|||++||++ .|++|++|++....
T Consensus 252 ---------------------~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 252 ---------------------EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp ---------------------SSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred ---------------------cccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 02467778999999999999996 79999999998543
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.7e-31 Score=286.46 Aligned_cols=337 Identities=9% Similarity=0.046 Sum_probs=214.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCccee--e----eeeeccCcchhhcccccccceeeEEEEE
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNV--Y----STFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~--~----~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
..|++++|+|+|++||+|+.||+|++||+.+.... .+.. . ..+.+|. ..|.+|+|+
T Consensus 99 ~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~------~~~i~~~~~~~~~~~~h~------------~~V~sl~~s 160 (902)
T 2oaj_A 99 GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS------SFKLDNLQKSSFFPAARL------------SPIVSIQWN 160 (902)
T ss_dssp SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE------EEEECCHHHHHTCSSSCC------------CCCCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc------cceeccccccccccccCC------------CCeEEEEEc
Confidence 36899999999999999999999999999854200 0000 0 1233444 569999999
Q ss_pred eccCCceEEEeeCCCeEEEEEccCCCc----cc------------------ccccEEEEEEecCCCCEEEEEeCCCeEEE
Q psy12356 78 RRKNQAHFLLSTNDQSFNIVDIKPTNM----EE------------------LNEVITAAEFHPIDCNLFVYSSSKGTIRL 135 (400)
Q Consensus 78 p~~~~~~~l~ss~D~tI~lWd~~~~~~----~~------------------~~~~V~sv~f~p~~~~~las~s~Dg~i~l 135 (400)
|++. ..+++++.|++| |||+++++. .. |...|++++|+|++ ++||+++.|++|++
T Consensus 161 p~~~-~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 161 PRDI-GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLVF 237 (902)
T ss_dssp TTEE-EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEEE
T ss_pred cCCC-CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC-CEEEEEECCCeEEE
Confidence 9642 367778899999 999988752 11 23569999999985 79999999999999
Q ss_pred Eeccccccccc--------c-------------cceeccCccc---c-e-eceeccCchh--------------------
Q psy12356 136 CDMRAAALCDR--------H-------------SKCLIEGTNC---N-C-QGLIVPESKR-------------------- 169 (400)
Q Consensus 136 WD~~~~~~~~~--------~-------------~~~~~~~~~~---~-~-~~~~~~~~~~-------------------- 169 (400)
||+++++.+.. | ...+..+.-+ . . ..+.++.+..
T Consensus 238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~ 317 (902)
T 2oaj_A 238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYS 317 (902)
T ss_dssp EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGG
T ss_pred EECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCcc
Confidence 99988754321 1 0001000000 0 0 0000000000
Q ss_pred -------------------------hhh---hc----cc------CcceeecCCCCCeEEEeecccccccCccc---ccc
Q psy12356 170 -------------------------EER---QS----SQ------NRREKEDNRRKPAIRLCDMRAAALCDRHS---KFF 208 (400)
Q Consensus 170 -------------------------~~~---~~----~~------~~~~~~~~~~dg~i~lWD~~~~~~~~~~~---~~~ 208 (400)
..+ .. .+ +....+..+.||.|++||+.++..+.... ..+
T Consensus 318 ~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l 397 (902)
T 2oaj_A 318 ITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNL 397 (902)
T ss_dssp GCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGG
T ss_pred ccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcc
Confidence 000 00 00 11122333468999999986653221100 000
Q ss_pred cCCCC----------------------CCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCc-eeeec-
Q psy12356 209 EEPED----------------------PTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRP-VETYP- 263 (400)
Q Consensus 209 ~~~~~----------------------~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~-l~~~~- 263 (400)
..+.. ......+.+|...+.+|+|+|||++||++ .|++||+||+.++... ...+.
T Consensus 398 ~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~ 477 (902)
T 2oaj_A 398 SWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEV 477 (902)
T ss_dssp TTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEE
T ss_pred cccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEe
Confidence 00000 00111256787888889999999999975 7999999999976210 01121
Q ss_pred --------CCC-------cCCCCccc-CCCCCceeecCccccccee--------------------ecc-----------
Q psy12356 264 --------THT-------KEENGQLR-DPSNITALRVPQIKPIELT--------------------VEA----------- 296 (400)
Q Consensus 264 --------~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~--------------------~~~----------- 296 (400)
+|. +.|+|+++ +++.+++|++|++...+.. ..+
T Consensus 478 ~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (902)
T 2oaj_A 478 NLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRA 557 (902)
T ss_dssp EHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGC
T ss_pred echhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccC
Confidence 563 57899976 4789999999998643210 000
Q ss_pred --------CccceeccccccceEEEEEcCCCcEEeeccc----chh---------------h-cccccceeEEEEc----
Q psy12356 297 --------SPRRIFANAHTYHINSISVNSDQLTVEASPR----GIF---------------A-DAHTYHISSTSVN---- 344 (400)
Q Consensus 297 --------~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~----~~~---------------~-~gh~~~V~~i~fs---- 344 (400)
.+... ..+|...|++++||||| +||++.. ++| . .||+..|++|+||
T Consensus 558 ~~~~~~g~~~~~~-l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~ 635 (902)
T 2oaj_A 558 PTGVRQGFMPSTA-VHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEY 635 (902)
T ss_dssp CTTCSEEEEEEEE-ECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEEC
T ss_pred CCCCCCccceeEE-EEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEec
Confidence 01122 35699999999999999 8875432 111 1 2899999999999
Q ss_pred -cCC---CEEEEe-cCCeEEEEeC
Q psy12356 345 -SDQ---ETYLSA-DDLRINLWHL 363 (400)
Q Consensus 345 -pDg---~~las~-~D~~i~lW~~ 363 (400)
||| ++||++ .|++|++|++
T Consensus 636 ~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 636 GDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp TTSSSEEEEEEEEETTSEEEEEEE
T ss_pred CCCCCcceEEEEEecCCcEEEEEE
Confidence 986 899997 7999999998
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-30 Score=244.09 Aligned_cols=297 Identities=13% Similarity=0.124 Sum_probs=181.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|+|++||+|+.||+|+|||+.+.. ...++...+.+|.. .|.+++|+|..++.
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-------~~~~~~~~~~~~~~------------~v~~~~~~~~~d~~ 72 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT-------SNWELSDSWRAHDS------------SIVAIDWASPEYGR 72 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSS-------CCEEEEEEEECCSS------------CEEEEEECCGGGCS
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC-------CcceecceeccCCC------------cEEEEEEcCCCCCC
Confidence 469999999999999999999999999998542 22345667788873 49999999942123
Q ss_pred eEEEeeCCCeEEEEEccCCC-------------cccccccEEEEEEecCC-CCEEEEEeCCCeEEEEecccccccccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------------MEELNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDRHSK 149 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------------~~~~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~~~~ 149 (400)
.+++++.|++|+|||++++. +..|...|.+++|+|+. +++|++++.|++|++||++++........
T Consensus 73 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 73 IIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp EEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEE
T ss_pred EEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccc
Confidence 67778999999999998763 23456789999999972 37899999999999999998854322110
Q ss_pred --eeccCc------ccceeceeccCchhhhhhcccC---cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcc
Q psy12356 150 --CLIEGT------NCNCQGLIVPESKREERQSSQN---RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKS 218 (400)
Q Consensus 150 --~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 218 (400)
...... ...+..+. ..|+ ....+.++.++.+.+|+...+... .. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~----------~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~------------~ 208 (351)
T 3f3f_A 153 TSEMKVLSIPPANHLQSDFCLS----------WCPSRFSPEKLAVSALEQAIIYQRGKDGKLH--VA------------A 208 (351)
T ss_dssp EEEEESCSCCCSSCSCCCEEEE----------ECCCSSSCCEEEEEETTEEEEEEECTTSCEE--EE------------E
T ss_pred cccccccccccCCcccceeEEE----------eccCCCCCcEEEEecCCCcEEEEccCCCcee--ee------------e
Confidence 000000 00011111 1222 334555567889977776654321 00 1
Q ss_pred cccccccCeEEEEECCCC----cEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCccccccee
Q psy12356 219 FFSEIISSISDVKISNSG----RYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELT 293 (400)
Q Consensus 219 ~~~~h~~~V~~v~fSpdg----~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~ 293 (400)
.+.+|...|.+++|+|++ ++|+++ .|++|++||++.+..+. ....+.. .... ........
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~---~~~~----------~~~~~~~~- 273 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPL-ASEESLT---NSNM----------FDNSADVD- 273 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------------
T ss_pred ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcc-ccCCccc---ceec----------cCCCcccc-
Confidence 134688899999999998 788864 69999999999764322 1111100 0000 00000000
Q ss_pred eccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 294 VEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 294 ~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
..+... ..+. ....+.+....+ ...... ..+|...|++++|+|||++||++ .|++|+||++...+
T Consensus 274 ~~~~~~---~~~~--~~~~~~~~~~~~---~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 274 MDAQGR---SDSN--TEEKAELQSNLQ---VELLSE-HDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp ----------------------CCSEE---EEEEEE-ECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred cccccc---cccc--cceeeeeccccc---ccEEEE-EecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 000000 0000 000000100000 000011 14899999999999999999997 69999999998755
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-31 Score=250.21 Aligned_cols=295 Identities=13% Similarity=0.132 Sum_probs=194.2
Q ss_pred eeEEEEEECCCCC-eEEEecC---CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 4 YMREASQRFSDGE-LLATGDK---GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 4 ~~v~~v~fspdG~-~Las~s~---Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
..|.+++|+|+|. ++|+|+. ||+|+|||+.+++ ..... ..+|. ..|.+++|+|+
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~---------~~~~~-~~~~~------------~~v~~~~~~~~ 76 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD---------LKLLR-EIEKA------------KPIKCGTFGAT 76 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS---------EEEEE-EEEES------------SCEEEEECTTC
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc---------cccee-eeccc------------CcEEEEEEcCC
Confidence 4799999999996 5567766 9999999998642 11111 22554 45999999998
Q ss_pred cC-CceEEEeeCCCeEEEEEccCCC-----cccccccEEEEE------EecCCCCEEEEEeCCCeEEEEeccccc-cccc
Q psy12356 80 KN-QAHFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAE------FHPIDCNLFVYSSSKGTIRLCDMRAAA-LCDR 146 (400)
Q Consensus 80 ~~-~~~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~------f~p~~~~~las~s~Dg~i~lWD~~~~~-~~~~ 146 (400)
+. +..+++++.|++|++||+.+++ +..|...|++++ |+|+ +++|++++.|++|++||++++. ....
T Consensus 77 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~ 155 (357)
T 3i2n_A 77 SLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEG-APEIVTGSRDGTVKVWDPRQKDDPVAN 155 (357)
T ss_dssp CTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-C-CCEEEEEETTSCEEEECTTSCSSCSEE
T ss_pred CCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCC-ccEEEEEeCCCeEEEEeCCCCCCccee
Confidence 41 2367778899999999998775 245778899995 4676 4789999999999999999874 2111
Q ss_pred ccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccC
Q psy12356 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISS 226 (400)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 226 (400)
... ........++.+.+. ....+++...++++.||.|++||++++.... ...|...
T Consensus 156 ~~~-~~~~~~~~v~~~~~~------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-----------------~~~~~~~ 211 (357)
T 3i2n_A 156 MEP-VQGENKRDCWTVAFG------NAYNQEERVVCAGYDNGDIKLFDLRNMALRW-----------------ETNIKNG 211 (357)
T ss_dssp ECC-CTTSCCCCEEEEEEE------CCCC-CCCEEEEEETTSEEEEEETTTTEEEE-----------------EEECSSC
T ss_pred ccc-cCCCCCCceEEEEEE------eccCCCCCEEEEEccCCeEEEEECccCceee-----------------ecCCCCc
Confidence 100 000000112221110 0122555566666789999999998765310 1256678
Q ss_pred eEEEEECC---CCcEEEE-ecCCeEEEEeCCCCCCceeeec-----CCC-------cCCCCc-c-cCCCCCceeecCccc
Q psy12356 227 ISDVKISN---SGRYMIS-RDYLCVKVWDLHMESRPVETYP-----THT-------KEENGQ-L-RDPSNITALRVPQIK 288 (400)
Q Consensus 227 V~~v~fSp---dg~~las-~~D~tIklWD~~~~~~~l~~~~-----~h~-------~~~~g~-~-~~~~~~~~i~l~~~~ 288 (400)
|.+++|+| ++++|++ +.|+.|++||++++. ++..+. +|. +.++|+ + ++++.++.+++|++.
T Consensus 212 v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 212 VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH-PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE-TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC-cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 99999999 8999886 468999999999753 444444 674 457777 4 456788899998874
Q ss_pred ccceeeccCccceeccccccceEEEEEcCCCcEEeecc--cch-hhcccccceeEEEEccCCCEEE-Ee-cCCeEEEEeC
Q psy12356 289 PIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASP--RGI-FADAHTYHISSTSVNSDQETYL-SA-DDLRINLWHL 363 (400)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~--~~~-~~~gh~~~V~~i~fspDg~~la-s~-~D~~i~lW~~ 363 (400)
...... .+.++|......+ ... ...+|...|.+++|+|||++|| |+ .|++|+||++
T Consensus 291 ~~~~~~-------------------~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 291 YPIQRS-------------------KKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp CCSCC---------------------CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCcccc-------------------cccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 322110 0001110000000 000 0147999999999999999998 66 6999999998
Q ss_pred cc
Q psy12356 364 EI 365 (400)
Q Consensus 364 ~~ 365 (400)
..
T Consensus 352 ~~ 353 (357)
T 3i2n_A 352 TK 353 (357)
T ss_dssp CC
T ss_pred CC
Confidence 74
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-30 Score=271.83 Aligned_cols=298 Identities=12% Similarity=0.115 Sum_probs=212.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|||||++||+|+.||+|+|||+.++ +.+..+.+|. ..|.+++|+|+++
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-----------~~~~~~~~~~------------~~v~~~~~s~~~~-- 68 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-----------VEVRSIQVTE------------TPVRAGKFIARKN-- 68 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTT-----------EEEEEEECCS------------SCEEEEEEEGGGT--
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCC-----------ceEEEEecCC------------CcEEEEEEeCCCC--
Confidence 46899999999999999999999999998753 3456778887 3499999999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc-cccccceeccCcccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL-CDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~-~~~~~~~~~~~~~~~ 158 (400)
.+++++.|++|+|||+.+++. ..|...|++++|+|++ ..|++++.||+|++||++++.. ... +... ...
T Consensus 69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~----~~~~-~~~ 142 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQT----FEGH-EHF 142 (814)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEE----EECC-SSC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEE----EcCC-CCc
Confidence 777888999999999998873 4577889999999985 7899999999999999988621 111 0000 011
Q ss_pred eeceeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC--C
Q psy12356 159 CQGLIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN--S 235 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp--d 235 (400)
+..+. .+| ++...++++.||+|++||++.+... ..+ ...|...+..++|+| +
T Consensus 143 v~~~~----------~~p~~~~~l~~~~~dg~v~vwd~~~~~~~----~~~-----------~~~~~~~v~~~~~~~~~~ 197 (814)
T 3mkq_A 143 VMCVA----------FNPKDPSTFASGCLDRTVKVWSLGQSTPN----FTL-----------TTGQERGVNYVDYYPLPD 197 (814)
T ss_dssp EEEEE----------EETTEEEEEEEEETTSEEEEEETTCSSCS----EEE-----------ECCCTTCCCEEEECCSTT
T ss_pred EEEEE----------EEcCCCCEEEEEeCCCeEEEEECCCCcce----eEE-----------ecCCCCCEEEEEEEECCC
Confidence 12222 234 4555666678999999999765321 111 113346799999999 9
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceecccc
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
+++|+++ .|++|++||++++ .++..+.+|. +.++|+++ +++.++++++|++...... ..+ ..|
T Consensus 198 ~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~------~~~-~~~ 269 (814)
T 3mkq_A 198 KPYMITASDDLTIKIWDYQTK-SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE------KTL-NVG 269 (814)
T ss_dssp CCEEEEECTTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE------EEE-CCS
T ss_pred CCEEEEEeCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE------EEe-ecC
Confidence 9999875 6899999999986 4678888884 46888754 5678899999987543221 111 345
Q ss_pred ccceEEEEEcCCCc--EEeecccc----------------------hh--------------------------------
Q psy12356 307 TYHINSISVNSDQL--TVEASPRG----------------------IF-------------------------------- 330 (400)
Q Consensus 307 ~~~i~~i~~s~dg~--~~~~~~~~----------------------~~-------------------------------- 330 (400)
...+++++|+|+|+ +++..... .+
T Consensus 270 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (814)
T 3mkq_A 270 LERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQT 349 (814)
T ss_dssp SSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCC
T ss_pred CCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeee
Confidence 55677777777775 23321100 00
Q ss_pred --hcccccceeEEEEccCCCEEEEecCCeEEEEeCcc
Q psy12356 331 --ADAHTYHISSTSVNSDQETYLSADDLRINLWHLEI 365 (400)
Q Consensus 331 --~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~ 365 (400)
...|...|.+++|||||++||++.|+.+++|++..
T Consensus 350 ~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~ 386 (814)
T 3mkq_A 350 KELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALA 386 (814)
T ss_dssp EEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETTT
T ss_pred ecCCCCccCCceeEECCCCCEEEEecCCEEEEEECcc
Confidence 01244567788888888888887788888888653
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-30 Score=245.55 Aligned_cols=301 Identities=14% Similarity=0.142 Sum_probs=185.3
Q ss_pred eeEEEEEECCC----CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 4 YMREASQRFSD----GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 4 ~~v~~v~fspd----G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
..|++++|+|+ ..++++++.++.|+|||..+++ .++.++.|... .+.+.|.+++|+|+
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~-----------~~~~~~~~~~~-------~~~~~v~~~~~~~~ 80 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQG-----------EIRLLQSYVDA-------DADENFYTCAWTYD 80 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGG-----------CEEEEEEEECS-------CTTCCEEEEEEEEC
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCc-----------EEEeeeecccc-------CCCCcEEEEEeccC
Confidence 47999999984 3445555557799999997532 23445444311 12356999999998
Q ss_pred cC--CceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 80 KN--QAHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 80 ~~--~~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
+. +..+++++.|++|+|||+.+++. ..|...|++++|+|+++++|++++.|++|++||++++........ ...
T Consensus 81 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~ 159 (366)
T 3k26_A 81 SNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG-VEG 159 (366)
T ss_dssp TTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS-TTS
T ss_pred CCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc-ccc
Confidence 53 23566788999999999988773 457788999999994468999999999999999998743221100 000
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccc-cCCCCC-----------CCccccc
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFF-EEPEDP-----------TNKSFFS 221 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~ 221 (400)
....+..+.+ .+++...++++.||.|++||++++.......... ..+... .......
T Consensus 160 -~~~~v~~~~~----------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (366)
T 3k26_A 160 -HRDEVLSADY----------DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD 228 (366)
T ss_dssp -CSSCEEEEEE----------CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS
T ss_pred -ccCceeEEEE----------CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc
Confidence 0112222222 3555556666789999999998764321000000 000000 0001123
Q ss_pred ccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccc
Q psy12356 222 EIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRR 300 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~ 300 (400)
+|...|.+++|+ +++|++ +.|+.|++||+++....+..+..+.. ....+ .
T Consensus 229 ~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~----------~~~~~-----------------~ 279 (366)
T 3k26_A 229 IHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSES----------NVTIL-----------------G 279 (366)
T ss_dssp SCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCC----------CEEEE-----------------E
T ss_pred CCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCc----------chhee-----------------c
Confidence 488899999999 668876 46899999999986543222211100 00000 0
Q ss_pred eeccccccceEEEEEcCC--CcEEeecccc----h--------------hhccc--ccceeEEEEccCCCEEEEe-cCCe
Q psy12356 301 IFANAHTYHINSISVNSD--QLTVEASPRG----I--------------FADAH--TYHISSTSVNSDQETYLSA-DDLR 357 (400)
Q Consensus 301 ~~~~~~~~~i~~i~~s~d--g~~~~~~~~~----~--------------~~~gh--~~~V~~i~fspDg~~las~-~D~~ 357 (400)
. ..+|...|+.++|+|| |+++++.... + ...+| ...|++++|+|||++||++ .|++
T Consensus 280 ~-~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 358 (366)
T 3k26_A 280 R-FDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDAS 358 (366)
T ss_dssp E-EECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred c-ccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCE
Confidence 0 1223334444444444 4444422110 0 01245 7899999999999999997 7999
Q ss_pred EEEEeCc
Q psy12356 358 INLWHLE 364 (400)
Q Consensus 358 i~lW~~~ 364 (400)
|++||+.
T Consensus 359 i~iwd~~ 365 (366)
T 3k26_A 359 IWRWDRL 365 (366)
T ss_dssp EEEEEC-
T ss_pred EEEEEec
Confidence 9999985
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.97 E-value=8.7e-30 Score=247.97 Aligned_cols=288 Identities=11% Similarity=0.109 Sum_probs=197.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec----
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR---- 79 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~---- 79 (400)
..|++|+|+| ++||+|+.||+|+|||+.+.... ...+....+.+|. ..|.+++|+|+
T Consensus 17 ~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~-----~~~~~~~~~~~h~------------~~v~~~~~~~~~~~~ 77 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNE-----NPKDKSYSHFVHK------------SGLHHVDVLQAIERD 77 (397)
T ss_dssp SCEEEEEECS--SEEEEEETTSEEEEEESBCCTTC-----CGGGGEEEEECCT------------TCEEEEEEEEEEETT
T ss_pred cCeEEEEecC--CeEEEEcCCCEEEEEECCCcccc-----cCCCcceEEecCC------------CcEEEEEEecccccC
Confidence 4689999999 89999999999999999864311 1123455677786 35999999998
Q ss_pred c---CCceEEEeeCCCeEEEEEccCCC------c---ccc-----cccEEEEEEe----cCCCCE-EEEEeCCCeEEEEe
Q psy12356 80 K---NQAHFLLSTNDQSFNIVDIKPTN------M---EEL-----NEVITAAEFH----PIDCNL-FVYSSSKGTIRLCD 137 (400)
Q Consensus 80 ~---~~~~~l~ss~D~tI~lWd~~~~~------~---~~~-----~~~V~sv~f~----p~~~~~-las~s~Dg~i~lWD 137 (400)
+ . .+++++.|++|++||+.+++ . ..+ ...|.+++|+ |++ .+ |++++.|+.|++||
T Consensus 78 g~~~~--~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd 154 (397)
T 1sq9_A 78 AFELC--LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWK 154 (397)
T ss_dssp TEEEE--EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEE
T ss_pred Ccccc--EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEe
Confidence 4 3 67778999999999998766 2 234 4789999999 975 67 99999999999999
Q ss_pred ccc------ccccccccc-eecc------CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcc
Q psy12356 138 MRA------AALCDRHSK-CLIE------GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRH 204 (400)
Q Consensus 138 ~~~------~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~ 204 (400)
+++ +....-... .+.. .....+..+ ...+++ ..++++.||.|++||++++...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----------~~~~~~-~l~~~~~dg~i~i~d~~~~~~~--- 220 (397)
T 1sq9_A 155 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSV----------DISERG-LIATGFNNGTVQISELSTLRPL--- 220 (397)
T ss_dssp EESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEE----------EECTTS-EEEEECTTSEEEEEETTTTEEE---
T ss_pred CCccccccccceeeccCcceeeeeeccccCCCCCceEE----------EECCCc-eEEEEeCCCcEEEEECCCCcee---
Confidence 998 533220000 0000 000111122 234566 6777789999999999875432
Q ss_pred cccccCCCCCCCccccccc---ccCeEEEEECCCCcEEEEe-cC---CeEEEEeCCCCCCceeeecCCCcCCCCcccCCC
Q psy12356 205 SKFFEEPEDPTNKSFFSEI---ISSISDVKISNSGRYMISR-DY---LCVKVWDLHMESRPVETYPTHTKEENGQLRDPS 277 (400)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~h---~~~V~~v~fSpdg~~las~-~D---~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~ 277 (400)
..+.. ..+| ...|.+++|+|++++|+++ .| +.|++||++++ .++..+.+... +.
T Consensus 221 -~~~~~---------~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~~~~~-~~------- 281 (397)
T 1sq9_A 221 -YNFES---------QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG-ERIGSLSVPTH-SS------- 281 (397)
T ss_dssp -EEEEC---------CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC-CEEEEECBC------------
T ss_pred -EEEec---------cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC-cccceeccCcc-cc-------
Confidence 22211 0126 7889999999999999864 67 99999999976 45666643210 00
Q ss_pred CCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccc----hh----------hc------cc---
Q psy12356 278 NITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRG----IF----------AD------AH--- 334 (400)
Q Consensus 278 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~----~~----------~~------gh--- 334 (400)
.. . .....|...|.+++|+|||+++++.+.. +| .. +|
T Consensus 282 ---~~---------------~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1sq9_A 282 ---QA---------------S--LGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEED 341 (397)
T ss_dssp ------------------------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGG
T ss_pred ---cc---------------c--ccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhh
Confidence 00 0 0012377778899999999888754321 11 13 66
Q ss_pred ------------ccceeEEEEccCC----------CEEEEe-cCCeEEEEeCccC
Q psy12356 335 ------------TYHISSTSVNSDQ----------ETYLSA-DDLRINLWHLEIT 366 (400)
Q Consensus 335 ------------~~~V~~i~fspDg----------~~las~-~D~~i~lW~~~~~ 366 (400)
...|++++|+||| ++|+++ .|++|++|+++++
T Consensus 342 ~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 342 ILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred hhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 8999999999999 799997 6999999998753
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-30 Score=253.96 Aligned_cols=268 Identities=14% Similarity=0.183 Sum_probs=183.6
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
++.|+||++ ++||+|. |++|+|||..+++ +.+.+..|.. ...|++|+|+|+++ .+
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~-----------~~~~~~~~~~----------~~~V~sv~fspdg~--~l 162 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGD-----------ILQLLQMEQP----------GEYISSVAWIKEGN--YL 162 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCC-----------EEEEEECCST----------TCCEEEEEECTTSS--EE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCC-----------EEEEEEecCC----------CCcEEEEEECCCCC--EE
Confidence 467999986 5888876 9999999998643 3344443321 14599999999874 77
Q ss_pred EEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc--cce
Q psy12356 86 LLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN--CNC 159 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~--~~~ 159 (400)
++++.|++|+|||+++++ +..|...+.++++++ .++++++.|+++++||.+..... +..+.. ...
T Consensus 163 asgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~------~~~~~~h~~~~ 233 (420)
T 4gga_A 163 AVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHH------VATLSGHSQEV 233 (420)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCE------EEEEECCSSCE
T ss_pred EEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeeccccee------eEEecccccce
Confidence 788999999999999886 345777888888765 58999999999999998876321 111100 011
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc-E
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR-Y 238 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~-~ 238 (400)
..+ ...+++...++++.|+.+++||.+.+........ ....|...|.+++|+|++. +
T Consensus 234 ~~~----------~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~------------~~~~~~~~V~~~~~~p~~~~~ 291 (420)
T 4gga_A 234 CGL----------RWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ------------TFTQHQGAVKAVAWCPWQSNV 291 (420)
T ss_dssp EEE----------EECTTSSEEEEEETTSCEEEEESSCCSSCSCCSE------------EECCCSSCEEEEEECTTCTTE
T ss_pred eee----------eecCCCCeeeeeeccccceEEeeccccccceeee------------eecccCCceeeeeeCCCcccE
Confidence 111 2235555666677899999999987653221111 1236778999999999765 5
Q ss_pred EEE--e-cCCeEEEEeCCCCCCceeeecCCC------cCCCCcc-cC--CCCCceeecCcccccceeeccCccceecccc
Q psy12356 239 MIS--R-DYLCVKVWDLHMESRPVETYPTHT------KEENGQL-RD--PSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 239 las--~-~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~-~~--~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
+++ + .|++|+|||+.++. ++..+..|. +.++++. ++ +..+++|++|++..
T Consensus 292 la~~~gs~D~~I~iwd~~t~~-~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~----------------- 353 (420)
T 4gga_A 292 LATGGGTSDRHIRIWNVCSGA-CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT----------------- 353 (420)
T ss_dssp EEEEECTTTCEEEEEETTTTE-EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-----------------
T ss_pred EEEEeecCCCEEEEEeCCccc-cceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCC-----------------
Confidence 553 2 48999999999864 666666553 2233332 11 22445555554321
Q ss_pred ccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 307 TYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 307 ~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
++.+. .+ .||.+.|++|+|||||++|||+ .|++|||||+..
T Consensus 354 ------------~~~v~-----~l-~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 354 ------------MAKVA-----EL-KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp ------------CCEEE-----EE-CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred ------------CcEEE-----EE-cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 11111 11 4899999999999999999997 799999999864
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-31 Score=258.91 Aligned_cols=236 Identities=12% Similarity=0.153 Sum_probs=174.4
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|+|++||+|+.|++|+|||+.+. ++++++.+|.. .|.+++|+|+++
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~-----------~~~~~~~~h~~------------~V~~v~~~p~~~-- 205 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGF-----------ECIRTMHGHDH------------NVSSVSIMPNGD-- 205 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSS-----------CEEECCCCCSS------------CEEEEEECSSSS--
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-----------ceeEEEcCCCC------------CEEEEEEeCCCC--
Confidence 46899999999999999999999999999753 35677888873 499999999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|++|++||+.++.+ ..|...|.+++|+|++ .+|++++.|++|++||++++........ . ...+
T Consensus 206 ~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~----h-~~~v 279 (410)
T 1vyh_C 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELRE----H-RHVV 279 (410)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECC----C-SSCE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEecC----C-CceE
Confidence 778889999999999998873 4577889999999985 7999999999999999988743221100 0 0111
Q ss_pred eceeccCchhh-hh---------hcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEE
Q psy12356 160 QGLIVPESKRE-ER---------QSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISD 229 (400)
Q Consensus 160 ~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 229 (400)
..+.+++.... .+ .....+...++++.|++|++||++++... .. +.+|.+.|.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~----~~------------~~~h~~~v~~ 343 (410)
T 1vyh_C 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL----MT------------LVGHDNWVRG 343 (410)
T ss_dssp EEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE----EE------------EECCSSCEEE
T ss_pred EEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE----EE------------EECCCCcEEE
Confidence 12222211100 00 00112345667778999999999976532 11 3478889999
Q ss_pred EEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcc
Q psy12356 230 VKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQI 287 (400)
Q Consensus 230 v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~ 287 (400)
|+|+|+|++|+++ .|++|+|||++++ .+++.+.+|. +.++++++ +++.|++|++|++
T Consensus 344 v~~~~~g~~l~s~s~D~~i~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 344 VLFHSGGKFILSCADDKTLRVWDYKNK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEECSSSSCEEEEETTTEEEEECCTTS-CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCC-ceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 9999999999974 6899999999876 4788899885 45777654 5677888888753
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=274.15 Aligned_cols=303 Identities=12% Similarity=0.112 Sum_probs=203.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|||++||+|+.||+|+|||+.+++ .+..+.+|. ..|.+++|+|+++
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~-----------~~~~~~~~~------------~~v~~~~~s~~~~-- 110 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE-----------KVVDFEAHP------------DYIRSIAVHPTKP-- 110 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC-----------EEEEEECCS------------SCEEEEEECSSSS--
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-----------EEEEEecCC------------CCEEEEEEeCCCC--
Confidence 468999999999999999999999999998642 355777887 3499999999875
Q ss_pred eEEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++++.|++|++||++++. +..|...|.+++|+|++++.|++++.||+|++||++++...... .......
T Consensus 111 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~----~~~~~~~ 186 (814)
T 3mkq_A 111 YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL----TTGQERG 186 (814)
T ss_dssp EEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEE----ECCCTTC
T ss_pred EEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEE----ecCCCCC
Confidence 67788999999999998763 24567889999999944579999999999999999877432110 0000011
Q ss_pred eeceeccCchhhhhhccc--CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 159 CQGLIVPESKREERQSSQ--NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
+..+. ..+ ++...++++.||.|++||++++... .. +.+|...|.+++|+|+|
T Consensus 187 v~~~~----------~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~----~~------------~~~~~~~v~~~~~~~~~ 240 (814)
T 3mkq_A 187 VNYVD----------YYPLPDKPYMITASDDLTIKIWDYQTKSCV----AT------------LEGHMSNVSFAVFHPTL 240 (814)
T ss_dssp CCEEE----------ECCSTTCCEEEEECTTSEEEEEETTTTEEE----EE------------EECCSSCEEEEEECSSS
T ss_pred EEEEE----------EEECCCCCEEEEEeCCCEEEEEECCCCcEE----EE------------EcCCCCCEEEEEEcCCC
Confidence 11111 223 5556667778999999999876432 11 34677899999999999
Q ss_pred cEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCc--ccCCCCCceeecCcccccceee-ccCccc-----
Q psy12356 237 RYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQ--LRDPSNITALRVPQIKPIELTV-EASPRR----- 300 (400)
Q Consensus 237 ~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~--~~~~~~~~~i~l~~~~~~~~~~-~~~~~~----- 300 (400)
++|+++ .|++|++||+.++ .++..+..|. +.++|. +++.+.+..+.+|++....... ....++
T Consensus 241 ~~l~~~~~dg~v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 319 (814)
T 3mkq_A 241 PIIISGSEDGTLKIWNSSTY-KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSG 319 (814)
T ss_dssp SEEEEEETTSCEEEEETTTC-SEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEEC
T ss_pred CEEEEEeCCCeEEEEECCCC-cEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEEC
Confidence 999875 6899999999986 4677777663 356765 2333333344444332111000 000000
Q ss_pred ------------------------------eeccccccceEEEEEcCCCcEEeecccch--------hhcccccceeEEE
Q psy12356 301 ------------------------------IFANAHTYHINSISVNSDQLTVEASPRGI--------FADAHTYHISSTS 342 (400)
Q Consensus 301 ------------------------------~~~~~~~~~i~~i~~s~dg~~~~~~~~~~--------~~~gh~~~V~~i~ 342 (400)
.....+...+.+++|+|||++++...... +...|.+.|.+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~~~~~~~~~i~~~~ 399 (814)
T 3mkq_A 320 GKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFV 399 (814)
T ss_dssp CTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETTTTEEEEEEECSEEE
T ss_pred cccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECccccccCCCceEEEE
Confidence 00123445577888888888776533211 1124455666777
Q ss_pred EccCCCEEEEe-cCCeEEEEe
Q psy12356 343 VNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 343 fspDg~~las~-~D~~i~lW~ 362 (400)
|||||++||++ .|++|++|+
T Consensus 400 ~spdg~~la~~~~~g~v~l~~ 420 (814)
T 3mkq_A 400 WGPDSNSYALIDETGQIKYYK 420 (814)
T ss_dssp ECTTSSCEEEECTTCCEEEEE
T ss_pred EeCCCCeEEEEeCCCcEEEEE
Confidence 77777777665 466677775
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-31 Score=259.02 Aligned_cols=302 Identities=10% Similarity=0.103 Sum_probs=197.2
Q ss_pred eeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..|++++|+| ||++||+|+.||+|+|||+.+.... ...+....+ +|. ..|.+++|+|++.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~-----~~~~~~~~~-~h~------------~~v~~~~~~~~~~- 124 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG-----EVYSSSLTY-DCS------------STVTQITMIPNFD- 124 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT-----CCCSCSEEE-ECS------------SCEEEEEECTTSS-
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccC-----cccceeeec-cCC------------CCEEEEEEeCCCC-
Confidence 5799999999 9999999999999999998641100 011111122 354 4599999999764
Q ss_pred ceEEEeeCCCeEEEEEcc---CCCccc----------------ccccEEEEE--EecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 83 AHFLLSTNDQSFNIVDIK---PTNMEE----------------LNEVITAAE--FHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~---~~~~~~----------------~~~~V~sv~--f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+++++.|++|+|||++ +++... +...+.++. ++|+ +++|++++.|++|++||++++
T Consensus 125 -~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~ 202 (437)
T 3gre_A 125 -AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEE-KSLLVALTNLSRVIIFDIRTL 202 (437)
T ss_dssp -EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSS-CEEEEEEETTSEEEEEETTTC
T ss_pred -EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCC
Confidence 77788999999999995 443211 122344444 4455 479999999999999999988
Q ss_pred cccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 142 ALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
.......... -...+..+. ..+++...++++.||+|++||++.+... +.+. .
T Consensus 203 ~~~~~~~~~~---h~~~v~~~~----------~s~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~-----------~ 254 (437)
T 3gre_A 203 ERLQIIENSP---RHGAVSSIC----------IDEECCVLILGTTRGIIDIWDIRFNVLI----RSWS-----------F 254 (437)
T ss_dssp CEEEEEECCG---GGCCEEEEE----------ECTTSCEEEEEETTSCEEEEETTTTEEE----EEEB-----------C
T ss_pred eeeEEEccCC---CCCceEEEE----------ECCCCCEEEEEcCCCeEEEEEcCCccEE----EEEe-----------c
Confidence 5432111000 001122222 2356666777788999999999975432 1111 1
Q ss_pred ccccCeEEEEE----CCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCC-------------------
Q psy12356 222 EIISSISDVKI----SNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEEN------------------- 270 (400)
Q Consensus 222 ~h~~~V~~v~f----Spdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~------------------- 270 (400)
+|...|.+++| +|++++|+++ .|++|+|||++++ .+++.+.+|. +.++
T Consensus 255 ~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~ 333 (437)
T 3gre_A 255 GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG-HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALS 333 (437)
T ss_dssp TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT-EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGC
T ss_pred CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC-cEEEEEEcCCCCCccceecccccccccceecccccCCceE
Confidence 45568999955 5578899875 6899999999986 4677777663 2222
Q ss_pred ------Ccc-cCCCCCceeecCcccccceeeccCccceeccc---cccceEEEEEcCCCcEEeecccc------hhhccc
Q psy12356 271 ------GQL-RDPSNITALRVPQIKPIELTVEASPRRIFANA---HTYHINSISVNSDQLTVEASPRG------IFADAH 334 (400)
Q Consensus 271 ------g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~---~~~~i~~i~~s~dg~~~~~~~~~------~~~~gh 334 (400)
+++ ++++.++.|++|++...+.. +.+ .+ ....+....++++..++...... ....+|
T Consensus 334 ~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 406 (437)
T 3gre_A 334 TISVSNDKILLTDEATSSIVMFSLNELSSS------KAV-ISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYH 406 (437)
T ss_dssp CEEEETTEEEEEEGGGTEEEEEETTCGGGC------EEE-ECC--CCCEEEEEEEETTEEEEEEECC-------------
T ss_pred EEEECCceEEEecCCCCeEEEEECCCcccc------eEE-ecccccCceEEEEEeecceEEEEEecccccccccCccccc
Confidence 243 45678899999987644321 111 12 23345666777766554432110 011369
Q ss_pred ccceeEEEEccC--CCEEEEe-cCCeEEEEe
Q psy12356 335 TYHISSTSVNSD--QETYLSA-DDLRINLWH 362 (400)
Q Consensus 335 ~~~V~~i~fspD--g~~las~-~D~~i~lW~ 362 (400)
...|++|+|+++ +.+|+|+ .||+|+||+
T Consensus 407 ~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 407 HDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 999999999999 7799997 699999995
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=247.19 Aligned_cols=308 Identities=12% Similarity=0.172 Sum_probs=188.2
Q ss_pred eeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCccee--eeee-----eccCcchhhcccccccceeeEEE
Q psy12356 4 YMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNV--YSTF-----QSHEPEFDYLKSLEIEEKINKIR 75 (400)
Q Consensus 4 ~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~--~~~~-----~~h~~~~~~~~~~~~~~~V~~v~ 75 (400)
..|++++|+| +|++||+|+.||+|+|||+.+..... .... .... .+|. ..|.+++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~------------~~v~~~~ 106 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQS-----YYTCKAVCSIGRDHPDVHR------------YSVETVQ 106 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSS-----CEEECEEEEECTTCTTCCS------------SCEEEEE
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccc-----eEeccccccccccccccCC------------CcEEEEE
Confidence 5799999999 99999999999999999998653210 0000 0000 1243 5699999
Q ss_pred EEeccCCceEEEeeCCCeEEEEEccCCCc---ccccccEEEEEEecCC--CCEEEEEeCCCeEEEEecccccccccccce
Q psy12356 76 WLRRKNQAHFLLSTNDQSFNIVDIKPTNM---EELNEVITAAEFHPID--CNLFVYSSSKGTIRLCDMRAAALCDRHSKC 150 (400)
Q Consensus 76 ~sp~~~~~~~l~ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~--~~~las~s~Dg~i~lWD~~~~~~~~~~~~~ 150 (400)
|+|++ ...+++++.|++|++||+.+++. ..+...+.++.|+|.+ +.++++++.|+.|++||++++........
T Consensus 107 ~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~- 184 (408)
T 4a11_B 107 WYPHD-TGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG- 184 (408)
T ss_dssp ECTTC-TTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC-
T ss_pred EccCC-CcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC-
Confidence 99943 23677788999999999988763 2345678999999864 24899999999999999998753321110
Q ss_pred eccCcccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEE
Q psy12356 151 LIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISD 229 (400)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 229 (400)
. ...+..+. ..+++. ..++++.||.|++||++....+....................+|...|.+
T Consensus 185 ---~-~~~v~~~~----------~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 250 (408)
T 4a11_B 185 ---H-RQEILAVS----------WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG 250 (408)
T ss_dssp ---C-CSCEEEEE----------ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred ---C-CCcEEEEE----------ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE
Confidence 0 01112222 234543 35666789999999998765321111100000111111223578889999
Q ss_pred EEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceecccccc
Q psy12356 230 VKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTY 308 (400)
Q Consensus 230 v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~ 308 (400)
++|+|+|++|+++ .|++|++||+.++. ++..+.++....... ...... ..... ...+..+.+.
T Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~-----~~~~~~--~~~~~--------~~~~~~~~~~ 314 (408)
T 4a11_B 251 LCFTSDGLHLLTVGTDNRMRLWNSSNGE-NTLVNYGKVCNNSKK-----GLKFTV--SCGCS--------SEFVFVPYGS 314 (408)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCC-BCCCCCCCCCCCCSS-----CCCCEE--CCSSS--------SCEEEEEETT
T ss_pred EEEcCCCCEEEEecCCCeEEEEECCCCc-cceeccccccccccc-----cceeEE--ecCCC--------ceEEEEecCC
Confidence 9999999999874 68999999999874 333333321100000 000000 00000 0000111111
Q ss_pred ceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 309 HINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 309 ~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
.|.-+.+. +++.+. . ..+|...|.+++|+|||++||++ .|++|++|+++..+
T Consensus 315 ~i~v~d~~-~~~~~~-----~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 315 TIAVYTVY-SGEQIT-----M-LKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEEEEETT-TCCEEE-----E-ECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred EEEEEECc-CCccee-----e-eccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 12111111 111111 1 14799999999999999999997 69999999998654
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=260.49 Aligned_cols=214 Identities=13% Similarity=0.137 Sum_probs=149.4
Q ss_pred EEEEEECC--CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 6 REASQRFS--DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 6 v~~v~fsp--dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
|++++|+| ||++||+|+.||+|+|||+.++.... ....+....+.+|. ..|.+++|+|++.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~---~~~~~~~~~~~~~~------------~~v~~~~~s~~~~-- 129 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESN---SVEVNVKSEFQVLA------------GPISDISWDFEGR-- 129 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGT---EEEEEEEEEEECCS------------SCEEEEEECTTSS--
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccc---cccccccchhhccc------------ccEEEEEEeCCCC--
Confidence 99999999 99999999999999999996321000 00123456677776 4599999999874
Q ss_pred eEEEeeCC----CeEEEEEccCCC--cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 84 HFLLSTND----QSFNIVDIKPTN--MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 84 ~~l~ss~D----~tI~lWd~~~~~--~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
.+++++.| +.|++||..... +..|...|++++|+|++..++++++.|++|++||++++........+.. ...
T Consensus 130 ~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~--~~~ 207 (615)
T 1pgu_A 130 RLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHK--QGS 207 (615)
T ss_dssp EEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSC--TTC
T ss_pred EEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCC--CCc
Confidence 66667766 689999842211 3567788999999998755899999999999999988754321110000 000
Q ss_pred ceeceeccCchhhhhhcccC-cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc---ccccCeEEEEEC
Q psy12356 158 NCQGLIVPESKREERQSSQN-RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS---EIISSISDVKIS 233 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~V~~v~fS 233 (400)
.+..+. ..++ +...++++.||.|++||++++... ..+ .. +|...|.+++|+
T Consensus 208 ~v~~~~----------~~~~~~~~l~~~~~dg~i~vwd~~~~~~~----~~~-----------~~~~~~~~~~v~~~~~~ 262 (615)
T 1pgu_A 208 FVRDVE----------FSPDSGEFVITVGSDRKISCFDGKSGEFL----KYI-----------EDDQEPVQGGIFALSWL 262 (615)
T ss_dssp CEEEEE----------ECSTTCCEEEEEETTCCEEEEETTTCCEE----EEC-----------CBTTBCCCSCEEEEEES
T ss_pred eEEEEE----------ECCCCCCEEEEEeCCCeEEEEECCCCCEe----EEe-----------cccccccCCceEEEEEc
Confidence 122222 3356 666666678999999999876532 111 02 577899999999
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCCCCceeeecCC
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~~~~l~~~~~h 265 (400)
++++|+++ .|++|++||++++. ++..+..|
T Consensus 263 -~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~ 293 (615)
T 1pgu_A 263 -DSQKFATVGADATIRVWDVTTSK-CVQKWTLD 293 (615)
T ss_dssp -SSSEEEEEETTSEEEEEETTTTE-EEEEEECC
T ss_pred -CCCEEEEEcCCCcEEEEECCCCc-EEEEEcCC
Confidence 99999875 68999999999753 44444433
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-30 Score=245.87 Aligned_cols=229 Identities=18% Similarity=0.260 Sum_probs=171.8
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+++|+|+|++||+|+.|+.|+||++.+.. +..+..+.+.+|.. .|.++.|+|++ .
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~-------~~~~~~~~~~~h~~------------~v~~~~~~~~~---~ 156 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTRE-------GNVRVSRELAGHTG------------YLSCCRFLDDN---Q 156 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTCS-------BSCEEEEEEECCSS------------CEEEEEEEETT---E
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccCC-------CcceeEEEecCCCc------------cEEEEEECCCC---c
Confidence 48899999999999999999999999987542 22344567788873 48999999875 6
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++++.|++|++||+++++ +..|...|++++|+|++ .+|++++.|++|++||++++.....+..+ ...+.
T Consensus 157 l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~~~~~~~~h-----~~~v~ 230 (340)
T 1got_B 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGH-----ESDIN 230 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEECCC-----SSCEE
T ss_pred EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeeEEEEcCC-----cCCEE
Confidence 8889999999999998876 34677889999999975 79999999999999999987432211100 01122
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
.+ .+.|++...++++.||+|++||++.+... ..+.. ..+...|.+++|+|+|++|+
T Consensus 231 ~v----------~~~p~~~~l~s~s~d~~v~iwd~~~~~~~----~~~~~----------~~~~~~v~~~~~s~~g~~l~ 286 (340)
T 1got_B 231 AI----------CFFPNGNAFATGSDDATCRLFDLRADQEL----MTYSH----------DNIICGITSVSFSKSGRLLL 286 (340)
T ss_dssp EE----------EECTTSSEEEEEETTSCEEEEETTTTEEE----EEECC----------TTCCSCEEEEEECTTSSEEE
T ss_pred EE----------EEcCCCCEEEEEcCCCcEEEEECCCCcEE----EEEcc----------CCcccceEEEEECCCCCEEE
Confidence 22 23466666777788999999999875432 11110 12335799999999999999
Q ss_pred Ee-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCc
Q psy12356 241 SR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQ 286 (400)
Q Consensus 241 s~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~ 286 (400)
++ .|++|+|||+.++ .++..+.+|. +.++|.++ +++.+++|++|+
T Consensus 287 ~g~~d~~i~vwd~~~~-~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 287 AGYDDFNCNVWDALKA-DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECCCCeEEEEEcccC-cEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 75 6899999999986 4678888985 45677654 466777777763
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=237.11 Aligned_cols=270 Identities=14% Similarity=0.176 Sum_probs=178.1
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
.++|+|||++ +||+|. |++|+|||+.+++ +++.++.|.. ...|++|+|+|+++ .+
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~-----------~~~~~~~~~~----------~~~V~~v~~~~~~~--~l 82 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGD-----------ILQLLQMEQP----------GEYISSVAWIKEGN--YL 82 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCC-----------EEEEEECCST----------TCCEEEEEECTTSS--EE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCC-----------EEEEEEecCC----------CCeEEEEEECCCCC--EE
Confidence 3679999987 788765 9999999998642 3445554331 14599999999874 77
Q ss_pred EEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 86 LLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
++++.|++|+|||++++++ ..|...+.++++.+ .++++++.++.+++|+...+..... ...... .....
T Consensus 83 ~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~ 155 (318)
T 4ggc_A 83 AVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVA---TLSGHS-QEVCG 155 (318)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEE---EEECCS-SCEEE
T ss_pred EEEECCCcEEEeecCCceeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEE---EEcCcc-CceEE
Confidence 7889999999999998873 45666677666554 5899999999999999887632100 000000 00111
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE-
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI- 240 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la- 240 (400)
. ...+++...++++.||+|++||+++++...... .....|.+.|.+++|+|++..++
T Consensus 156 ~----------~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------------~~~~~~~~~v~~~~~~~~~~~~~~ 213 (318)
T 4ggc_A 156 L----------RWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPL------------QTFTQHQGAVKAVAWCPWQSNVLA 213 (318)
T ss_dssp E----------EECTTSSEEEEEETTSCEEEEESSCBTTBSCCS------------EEECCCCSCEEEEEECTTSTTEEE
T ss_pred E----------EEcCCCCEEEEEecCcceeEEECCCCcccccce------------eeecccCCceEEEEecCCCCcEEE
Confidence 1 122444455666789999999998765321111 11224567899999999876432
Q ss_pred --Ee-cCCeEEEEeCCCCCCceeeecCCC------cCCCCcc-c--CCCCCceeecCcccccceeeccCccceecccccc
Q psy12356 241 --SR-DYLCVKVWDLHMESRPVETYPTHT------KEENGQL-R--DPSNITALRVPQIKPIELTVEASPRRIFANAHTY 308 (400)
Q Consensus 241 --s~-~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~-~--~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~ 308 (400)
++ .+++|+|||.+... .......+. +.+++.. + +++.+++|++|++...
T Consensus 214 ~~~~~~~~~i~lwd~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~------------------ 274 (318)
T 4ggc_A 214 TGGGTSDRHIRIWNVCSGA-CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM------------------ 274 (318)
T ss_dssp EEECTTTCEEEEEETTTCC-EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC------------------
T ss_pred EEecCCCCEEEEEeccccc-ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC------------------
Confidence 33 47999999999764 333332221 2333332 1 1335566666654211
Q ss_pred ceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 309 HINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 309 ~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
+.+. .+ .||.+.|++|+|||||++|||+ .|++|||||+..
T Consensus 275 -----------~~~~-----~l-~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 275 -----------AKVA-----EL-KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp -----------CEEE-----EE-CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred -----------cEEE-----EE-cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 1110 11 4899999999999999999997 799999999864
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=236.87 Aligned_cols=266 Identities=15% Similarity=0.153 Sum_probs=185.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++| |+|++||+|+.||.|+|||+.+. +....+..|. ..|.+++|+|++.
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~-----------~~~~~~~~~~------------~~v~~~~~~~~~~-- 72 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ-----------WLGTVVYTGQ------------GFLNSVCYDSEKE-- 72 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTSEEEEEEESSS-----------EEEEEEEECS------------SCEEEEEEETTTT--
T ss_pred CCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC-----------EEEEEeecCC------------ccEEEEEECCCCC--
Confidence 46899999 99999999999999999999743 2345667775 3599999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.+++++.|+.|++|++.... +..|...|.+++|++ +++++++.|++|++||.... ... .... .
T Consensus 73 ~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~l~~~~~d~~i~~~d~~~~--~~~----~~~~-~ 142 (313)
T 3odt_A 73 LLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQD---GVVISGSWDKTAKVWKEGSL--VYN----LQAH-N 142 (313)
T ss_dssp EEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTEE--EEE----EECC-S
T ss_pred EEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecC---CEEEEEeCCCCEEEEcCCcE--EEe----cccC-C
Confidence 77788999999999987543 234677899999943 58999999999999993222 110 0000 0
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
..+..+.+. .++....++++.||.|++||..... ..+. ..|...|.+++|+|++
T Consensus 143 ~~v~~~~~~---------~~~~~~l~~~~~d~~i~i~d~~~~~------~~~~-----------~~~~~~i~~~~~~~~~ 196 (313)
T 3odt_A 143 ASVWDAKVV---------SFSENKFLTASADKTIKLWQNDKVI------KTFS-----------GIHNDVVRHLAVVDDG 196 (313)
T ss_dssp SCEEEEEEE---------ETTTTEEEEEETTSCEEEEETTEEE------EEEC-----------SSCSSCEEEEEEEETT
T ss_pred CceeEEEEc---------cCCCCEEEEEECCCCEEEEecCceE------EEEe-----------ccCcccEEEEEEcCCC
Confidence 111111111 1134445556689999999954321 1111 1266789999999999
Q ss_pred cEEEEecCCeEEEEeCCCCCCceeeecCCC-------cCCCCcccCCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 237 RYMISRDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 237 ~~las~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
++++++.|++|++||++++ .++..+.+|. +.++|.+++++.++.+++|++...+.
T Consensus 197 ~~~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~----------------- 258 (313)
T 3odt_A 197 HFISCSNDGLIKLVDMHTG-DVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSL----------------- 258 (313)
T ss_dssp EEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCE-----------------
T ss_pred eEEEccCCCeEEEEECCch-hhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCce-----------------
Confidence 9555578999999999986 4678887774 34555555555666666665422110
Q ss_pred eEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEecCCeEEEEeCccCC
Q psy12356 310 INSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSADDLRINLWHLEITD 367 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~~~ 367 (400)
+. . ..+|...|.+++|+|||++++++.|++|++|+++..+
T Consensus 259 ~~-----------------~-~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 259 KQ-----------------V-ITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EE-----------------E-EECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGG
T ss_pred eE-----------------E-EeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCc
Confidence 00 0 1367888999999999996655689999999998643
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-30 Score=245.82 Aligned_cols=226 Identities=13% Similarity=0.147 Sum_probs=173.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|++.+||+|+.|++|+|||+.++ +.+..+..|.. .+.+++|+|+++
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~-----------~~~~~~~~~~~------------~~~~~~~spdg~-- 135 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLDAHIRLWDLENG-----------KQIKSIDAGPV------------DAWTLAFSPDSQ-- 135 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTT-----------EEEEEEECCTT------------CCCCEEECTTSS--
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-----------CEEEEEeCCCc------------cEEEEEECCCCC--
Confidence 35899999999999999999999999999753 24556666653 377899999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|++|++||+++++. ..+...|.+++|+|++ ++||+++.|++|++||+++++.......+ ...+
T Consensus 136 ~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~h-----~~~v 209 (321)
T 3ow8_A 136 YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGH-----AMPI 209 (321)
T ss_dssp EEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCC-----SSCC
T ss_pred EEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEccc-----CCce
Confidence 677788999999999988763 3456679999999985 79999999999999999988543221110 0111
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+ .+.|++...++++.|++|++||++.+... . .+.+|...|.+++|+|+|++|
T Consensus 210 ~~l----------~~spd~~~l~s~s~dg~i~iwd~~~~~~~----~------------~~~~h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 210 RSL----------TFSPDSQLLVTASDDGYIKIYDVQHANLA----G------------TLSGHASWVLNVAFCPDDTHF 263 (321)
T ss_dssp CEE----------EECTTSCEEEEECTTSCEEEEETTTCCEE----E------------EECCCSSCEEEEEECTTSSEE
T ss_pred eEE----------EEcCCCCEEEEEcCCCeEEEEECCCccee----E------------EEcCCCCceEEEEECCCCCEE
Confidence 222 23467767778889999999999875432 1 134788899999999999999
Q ss_pred EEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCcc-cCCCCCceeecCcc
Q psy12356 240 ISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQL-RDPSNITALRVPQI 287 (400)
Q Consensus 240 as~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~-~~~~~~~~i~l~~~ 287 (400)
+++ .|++|+|||++++ .+++++.+|. +.++|.+ ++++.+++|++|+.
T Consensus 264 ~s~s~D~~v~iwd~~~~-~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 264 VSSSSDKSVKVWDVGTR-TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEeCCCcEEEEeCCCC-EEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 974 6999999999986 5788898885 4566664 35667777777763
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=262.70 Aligned_cols=304 Identities=9% Similarity=0.001 Sum_probs=201.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.-|.+|+|||||++|||+|.|++|+ |... .+.+.+|. ..|.+|+|+|++
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~--------------~~~l~gh~------------~~v~~V~FsPdg--- 64 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKY--------------AKDINCNS------------KNLFHVKEFPLE--- 64 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECC--------------CSCCSSBG------------GGTEEEEEECCC---
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccc--------------cceecCCC------------ccEEEEEECCCC---
Confidence 3478999999999999999999999 6332 12446776 349999999986
Q ss_pred eEEEeeCCCeEEEEEccCCCcc--cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME--ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~--~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
.++++++|+.+..... .+...|.+++|+|+| .+||+++.||+|++||..+ ++.... +........+.
T Consensus 65 ------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~- 133 (588)
T 2j04_A 65 ------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYH- 133 (588)
T ss_dssp ------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEE-
T ss_pred ------CcceEEEEeCCCceEeecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEE-
Confidence 4667666765443321 346789999999986 7899999999999999543 111100 00000000122
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCc---ccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDR---HSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
.+.++|++...++++.||+|+|||+..+..... ..+.+.. ...+|.++|.+|+||||| +
T Consensus 134 ---------svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~--------~~~gh~~~V~sVawSPdg-L 195 (588)
T 2j04_A 134 ---------CFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRL--------SDAGSKDWVTHIVWYEDV-L 195 (588)
T ss_dssp ---------EEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEEC--------SCTTCCCCEEEEEEETTE-E
T ss_pred ---------EEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeec--------ccccccccEEEEEEcCCc-E
Confidence 234458888888888999999999987542110 0111111 024688899999999999 6
Q ss_pred EEEecCCeEEEEeCCCCCC--ceeee-cCCC-------cCCCCcc-cCCCCCceeecCcccccceeeccCccceeccccc
Q psy12356 239 MISRDYLCVKVWDLHMESR--PVETY-PTHT-------KEENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHT 307 (400)
Q Consensus 239 las~~D~tIklWD~~~~~~--~l~~~-~~h~-------~~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (400)
++++.|++||+||+..+.. ..+++ ++|. ++ |.+ ++++ +++|++|++..... ..+..+|.
T Consensus 196 aass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~-------~~~~~gh~ 265 (588)
T 2j04_A 196 VAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSI-------SSLKTGSL 265 (588)
T ss_dssp EEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEE-------EEEECSCC
T ss_pred EEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeE-------EEEEcCCC
Confidence 6677899999999987642 22456 4674 33 444 3444 68999998754332 12233699
Q ss_pred cceEEEEE--cCCCcEEeecc---c------------------------chhh--------cccccceeEEEEccCCCEE
Q psy12356 308 YHINSISV--NSDQLTVEASP---R------------------------GIFA--------DAHTYHISSTSVNSDQETY 350 (400)
Q Consensus 308 ~~i~~i~~--s~dg~~~~~~~---~------------------------~~~~--------~gh~~~V~~i~fspDg~~l 350 (400)
..++++.| +|||+.++.+. . +.|. ..+...|++|+|||||+++
T Consensus 266 ~~V~~va~~~s~d~~~La~a~edG~klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~l 345 (588)
T 2j04_A 266 ENFHIIPLNHEKESTILLMSNKTSYKVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSI 345 (588)
T ss_dssp SCCCEEEETTCSSCEEEEECSSCEEEEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEE
T ss_pred ceEEEEEeeeCCCCCEEEEEcCCCCEEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEE
Confidence 99999999 99998776543 0 0111 1235579999999999999
Q ss_pred EEe-c-CCeEEEEeCccCCeeEEEEeecCC
Q psy12356 351 LSA-D-DLRINLWHLEITDQSFNIVDIKPT 378 (400)
Q Consensus 351 as~-~-D~~i~lW~~~~~~~~~~~~~~~~~ 378 (400)
|++ . +..+-=+.+. .+.-+++..++=+
T Consensus 346 A~~~~i~~~~~~y~i~-s~~~~~i~f~pL~ 374 (588)
T 2j04_A 346 AIVYDMERVAFKYKIA-SEQSFNIMFAPLY 374 (588)
T ss_dssp EEEEEEECSSCCCCCS-SSCCEEEEEEESS
T ss_pred EEEEeccCceeEEeec-cceEEEEEEEEcc
Confidence 986 2 3322123333 2445677666544
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=253.59 Aligned_cols=255 Identities=14% Similarity=0.137 Sum_probs=188.9
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
+++++|+|||++||+|+.||+|++||+.+.. ....+..|. .+....|+|++. .+
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~-----------~~~~~~~~~-------------~~~~~~~~~~~~--~l 112 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRD-----------GSKMLKRAD-------------YTAVDTAKLQMR--RF 112 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEE-----------TTTTSCSCC-------------EEEEEEECSSSC--EE
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccc-----------eeeEEecCC-------------ceEEEEEecCCC--EE
Confidence 4578999999999999999999999987532 122333442 234456777764 67
Q ss_pred EEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 86 LLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
++++.|++|+|||++++.. ..|...|++++|+|++ ++|++++.|++|++||++++....
T Consensus 113 ~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~---------------- 175 (420)
T 3vl1_A 113 ILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNPR---------------- 175 (420)
T ss_dssp EEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCCE----------------
T ss_pred EEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCce----------------
Confidence 7789999999999988762 4677899999999985 799999999999999998772100
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las 241 (400)
. +.+|...|.+++|+|++++|++
T Consensus 176 ---------------------------------------------~------------~~~h~~~v~~~~~~~~~~~l~s 198 (420)
T 3vl1_A 176 ---------------------------------------------T------------LIGHRATVTDIAIIDRGRNVLS 198 (420)
T ss_dssp ---------------------------------------------E------------EECCSSCEEEEEEETTTTEEEE
T ss_pred ---------------------------------------------E------------EcCCCCcEEEEEEcCCCCEEEE
Confidence 0 1256688999999999999987
Q ss_pred e-cCCeEEEEeCCCCCCceeeecCCC-------------------------------cCCCCccc-CCCCCceeecCccc
Q psy12356 242 R-DYLCVKVWDLHMESRPVETYPTHT-------------------------------KEENGQLR-DPSNITALRVPQIK 288 (400)
Q Consensus 242 ~-~D~tIklWD~~~~~~~l~~~~~h~-------------------------------~~~~g~~~-~~~~~~~i~l~~~~ 288 (400)
+ .|++|++||++++ .++..+..|. +.++|+++ +++.++.+++|++.
T Consensus 199 ~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 277 (420)
T 3vl1_A 199 ASLDGTIRLWECGTG-TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF 277 (420)
T ss_dssp EETTSCEEEEETTTT-EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT
T ss_pred EcCCCcEEEeECCCC-ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC
Confidence 4 6899999999986 4666665432 34677754 46778899999875
Q ss_pred ccceeeccCccceeccccccceEEEEEcCCCc-EEeeccc----chh-----------hcc-cccceeEEEEccCCCEEE
Q psy12356 289 PIELTVEASPRRIFANAHTYHINSISVNSDQL-TVEASPR----GIF-----------ADA-HTYHISSTSVNSDQETYL 351 (400)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~-~~~~~~~----~~~-----------~~g-h~~~V~~i~fspDg~~la 351 (400)
..+.. ..+..+|...|.+++|+|+|+ ++++.+. ++| ..+ |...|.++ ++|+|++|+
T Consensus 278 ~~~~~------~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~ 350 (420)
T 3vl1_A 278 SKEQT------IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAGALFV 350 (420)
T ss_dssp TCCEE------EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETTEEEE
T ss_pred CCcee------EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCCCEEE
Confidence 43321 122346888999999999998 7765332 111 123 67788877 556889999
Q ss_pred Ee-cCCeEEEEeCccCCe
Q psy12356 352 SA-DDLRINLWHLEITDQ 368 (400)
Q Consensus 352 s~-~D~~i~lW~~~~~~~ 368 (400)
++ .|++|++|++...++
T Consensus 351 s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 351 SSGFDTSIKLDIISDPES 368 (420)
T ss_dssp EETTTEEEEEEEECCTTC
T ss_pred EecCCccEEEEeccCCCC
Confidence 97 699999999876443
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=251.82 Aligned_cols=303 Identities=13% Similarity=0.093 Sum_probs=203.9
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
+.++.| ++++||+|+.||+|+|||+.++ +.+..+.+|.. .|.+++|+|++ .+
T Consensus 125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~~-----------~~~~~~~~h~~------------~V~~l~~~~~~---~l 176 (464)
T 3v7d_B 125 ITCLQF--EDNYVITGADDKMIRVYDSINK-----------KFLLQLSGHDG------------GVWALKYAHGG---IL 176 (464)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTTT-----------EEEEEECCCSS------------CEEEEEECSTT---EE
T ss_pred EEEEEE--CCCEEEEEcCCCcEEEEECCCC-----------cEEEEEeCCCc------------CEEEEEEcCCC---EE
Confidence 566666 6789999999999999998753 35667888874 59999998865 78
Q ss_pred EEeeCCCeEEEEEccCCC----cccccccEEEEEEecC-CCCEEEEEeCCCeEEEEecccccccccccceec----cCc-
Q psy12356 86 LLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPI-DCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLI----EGT- 155 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~-~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~----~~~- 155 (400)
++++.|++|++||+++++ +..|...|.+++|+|. ++.++++++.|++|++||++++........... ...
T Consensus 177 ~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 256 (464)
T 3v7d_B 177 VSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP 256 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCG
T ss_pred EEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeecc
Confidence 889999999999999886 3457788999999952 347899999999999999998743211100000 000
Q ss_pred ccceeceeccCchhhhh-hcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 156 NCNCQGLIVPESKREER-QSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
.....-.....++...+ ...+++...++++.||.|++||++++... .. +.+|...|.+++|+|
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~----~~------------~~~~~~~v~~~~~~~ 320 (464)
T 3v7d_B 257 EENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCL----YI------------LSGHTDRIYSTIYDH 320 (464)
T ss_dssp GGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEE----EE------------ECCCSSCEEEEEEET
T ss_pred CCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE----EE------------ecCCCCCEEEEEEcC
Confidence 00000000000000000 01233444566678999999999876532 11 336778999999999
Q ss_pred CCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcC-----CCCcc-cCCCCCceeecCcccccceeeccCccceeccccc
Q psy12356 235 SGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKE-----ENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHT 307 (400)
Q Consensus 235 dg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~-----~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (400)
++++|+++ .|++|++||++++ .++.++.+|... .++.+ ++++.++++++|++...... +...|.
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~--------~~~~~~ 391 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENG-ELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK--------FSYHHT 391 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEE--------EEEECT
T ss_pred CCCEEEEEeCCCcEEEEECCCC-cEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCcee--------eeecCC
Confidence 99999875 6899999999986 478889888631 23443 46788899999987543221 122355
Q ss_pred cceEEEEEcCCCcEEeecccc---h-----------hhcccccceeEEEEccCCCEEEE-e-cCCeEEEEeC
Q psy12356 308 YHINSISVNSDQLTVEASPRG---I-----------FADAHTYHISSTSVNSDQETYLS-A-DDLRINLWHL 363 (400)
Q Consensus 308 ~~i~~i~~s~dg~~~~~~~~~---~-----------~~~gh~~~V~~i~fspDg~~las-~-~D~~i~lW~~ 363 (400)
..+..++|+|+|+++++.... + +..+|...|.+++|+ ++.+++ + +|+.+.+|-+
T Consensus 392 ~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~--~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 392 NLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp TCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEESCTTTTCSEEEEEEEE--TTEEEEEEEETTEEEEEEE
T ss_pred CCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEehhhccCCCcEEEEEec--CCEEEEEEEeCCeEEEEEe
Confidence 567788899999888754321 1 124788899999997 444444 4 5766555443
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=249.37 Aligned_cols=242 Identities=16% Similarity=0.219 Sum_probs=170.2
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|++++|+|||++||+|+.|++|+|||+.++ +.+..+.+|.. .|.+++|+|++. .+
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~-----------~~~~~~~~h~~------------~v~~~~~~p~~~--~l 180 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENR-----------KIVMILQGHEQ------------DIYSLDYFPSGD--KL 180 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTT-----------EEEEEECCCSS------------CEEEEEECTTSS--EE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCC-----------cEEEEEccCCC------------CEEEEEEcCCCC--EE
Confidence 899999999999999999999999999753 34567888874 499999999874 77
Q ss_pred EEeeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc--cccee
Q psy12356 86 LLSTNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT--NCNCQ 160 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~--~~~~~ 160 (400)
++++.|++|+|||++++++. .+...+.+++|+|.++++|++++.|++|++||++++.+............ ...+.
T Consensus 181 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 181 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVY 260 (393)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEE
T ss_pred EEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEE
Confidence 78899999999999987632 34567899999995568999999999999999998754322110000000 01122
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
.+ .+.+++...++++.|++|++||++....... ...+........+.+|...|.+++|+|++++|+
T Consensus 261 ~v----------~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~----~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 326 (393)
T 1erj_A 261 SV----------VFTRDGQSVVSGSLDRSVKLWNLQNANNKSD----SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL 326 (393)
T ss_dssp EE----------EECTTSSEEEEEETTSEEEEEEC-------------------CEEEEEECCSSCEEEEEECGGGCEEE
T ss_pred EE----------EECCCCCEEEEEeCCCEEEEEECCCCCCccc----ccCCCCCcceEEEecccCcEEEEEECCCCCEEE
Confidence 22 2346666677778899999999986432110 000000001112457889999999999999999
Q ss_pred Ee-cCCeEEEEeCCCCCCceeeecCCCc-------------CCCCccc-CCCCCceeecCcc
Q psy12356 241 SR-DYLCVKVWDLHMESRPVETYPTHTK-------------EENGQLR-DPSNITALRVPQI 287 (400)
Q Consensus 241 s~-~D~tIklWD~~~~~~~l~~~~~h~~-------------~~~g~~~-~~~~~~~i~l~~~ 287 (400)
++ .|++|++||++++ .++..+.+|.. .+++.++ +++.|+++++|++
T Consensus 327 sgs~D~~v~iwd~~~~-~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 327 SGSKDRGVLFWDKKSG-NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp EEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred EEeCCCeEEEEECCCC-eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 75 6999999999986 47888888852 1345543 4667777777765
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=256.88 Aligned_cols=314 Identities=14% Similarity=0.130 Sum_probs=202.7
Q ss_pred eeEEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec-cC
Q psy12356 4 YMREASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR-KN 81 (400)
Q Consensus 4 ~~v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~-~~ 81 (400)
..|.+++|+|+|+ +|++++.|++|++||..+. +.+..+.+|... ...|.+++|+|+ ++
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-----------~~~~~~~~~~~~---------~~~v~~~~~~~~~~~ 220 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF-----------KFSASDRTHHKQ---------GSFVRDVEFSPDSGE 220 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTTB-----------EEEEEECSSSCT---------TCCEEEEEECSTTCC
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc-----------ceeeeecccCCC---------CceEEEEEECCCCCC
Confidence 4589999999998 8999999999999998742 456678888630 014999999998 64
Q ss_pred CceEEEeeCCCeEEEEEccCCC----c-c---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN----M-E---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~----~-~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
.+++++.|++|++||+.+++ + . .|...|.+++|+ + +++|++++.|++|++||++++............
T Consensus 221 --~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 296 (615)
T 1pgu_A 221 --FVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-D-SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ 296 (615)
T ss_dssp --EEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-S-SSEEEEEETTSEEEEEETTTTEEEEEEECCTTC
T ss_pred --EEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-C-CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc
Confidence 67778899999999998876 2 3 567789999999 6 579999999999999999987543221100000
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccccccc--------------------------------
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALC-------------------------------- 201 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~-------------------------------- 201 (400)
. ......+.+ +++...+.++.||.|++||++++...
T Consensus 297 ~-~~~~~~~~~-----------~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~ 364 (615)
T 1pgu_A 297 L-GNQQVGVVA-----------TGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSS 364 (615)
T ss_dssp G-GGCEEEEEE-----------EETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTT
T ss_pred c-cCceeEEEe-----------CCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEc
Confidence 0 000001111 12222333334555555555442211
Q ss_pred ---------------------------CcccccccCC----------------------------------CCCCCcccc
Q psy12356 202 ---------------------------DRHSKFFEEP----------------------------------EDPTNKSFF 220 (400)
Q Consensus 202 ---------------------------~~~~~~~~~~----------------------------------~~~~~~~~~ 220 (400)
++.++.|... ...... .
T Consensus 365 ~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 442 (615)
T 1pgu_A 365 SSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK--S 442 (615)
T ss_dssp TEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEE--E
T ss_pred hhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceee--e
Confidence 0000000000 000000 0
Q ss_pred cccccCeEEEEECCCCcEEEE-ec-CCeEEEEeCCCCCCce-eeecCCC-------cCCCCccc-CCCCCceeecCcccc
Q psy12356 221 SEIISSISDVKISNSGRYMIS-RD-YLCVKVWDLHMESRPV-ETYPTHT-------KEENGQLR-DPSNITALRVPQIKP 289 (400)
Q Consensus 221 ~~h~~~V~~v~fSpdg~~las-~~-D~tIklWD~~~~~~~l-~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~ 289 (400)
..|...+.+++|+ +++|++ +. |++|++||+.++. .. ..+.+|. +.++|+++ +++.++.+++|++..
T Consensus 443 ~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 519 (615)
T 1pgu_A 443 VRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLE-VSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS 519 (615)
T ss_dssp EECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEE-EEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCcc-ccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCC
Confidence 0133445555555 555654 34 7788888877642 11 4556664 56888875 467889999998864
Q ss_pred cceeeccCccceeccccccceEEEEEcC----------CCcEEeecccc----hh-----------hcccccceeEEEEc
Q psy12356 290 IELTVEASPRRIFANAHTYHINSISVNS----------DQLTVEASPRG----IF-----------ADAHTYHISSTSVN 344 (400)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~i~~i~~s~----------dg~~~~~~~~~----~~-----------~~gh~~~V~~i~fs 344 (400)
.+.. ..+...|...|++++|+| ||+++++.+.. +| ..+|...|.+++|+
T Consensus 520 ~~~~------~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s 593 (615)
T 1pgu_A 520 REVK------TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE 593 (615)
T ss_dssp TEEE------ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEE
T ss_pred Ccce------eEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEc
Confidence 4332 122223899999999999 99998864321 11 25899999999999
Q ss_pred cCCCEEEEe-cCCeEEEEeCcc
Q psy12356 345 SDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 345 pDg~~las~-~D~~i~lW~~~~ 365 (400)
|||+ |+++ .|++|++|+++.
T Consensus 594 ~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 594 TPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ETTE-EEEEETTSCEEEEEEC-
T ss_pred CCCC-eEEecCCceEEEEeeec
Confidence 9999 9996 799999999874
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=255.39 Aligned_cols=291 Identities=12% Similarity=0.094 Sum_probs=203.6
Q ss_pred EECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeee-eccCcchhhcccccccceeeEEEEEe-ccCCceEEE
Q psy12356 10 QRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTF-QSHEPEFDYLKSLEIEEKINKIRWLR-RKNQAHFLL 87 (400)
Q Consensus 10 ~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~V~~v~~sp-~~~~~~~l~ 87 (400)
.|+|+|+.+++++ .|+... +++..+ .+|+ +.|++++|+| +++ .+++
T Consensus 34 ~f~~~~~~~~~~~------~w~~~g------------~~~~~~~~~h~------------~~V~~~~~s~~~~~--~l~s 81 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLRG------------KLIATLMENEP------------NSITSSAVSPGETP--YLIT 81 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCCC------------CEEEEECTTTT------------SCEEEEEEECSSSC--EEEE
T ss_pred hcCCccccccccc------cccccc------------eEEeeeccCCC------------CceEEEEECCCCCC--EEEE
Confidence 5899999999876 387542 345677 7786 3599999999 764 7778
Q ss_pred eeCCCeEEEEEccC---CC-c----c-cccccEEEEEEecCCCCEEEEEeCCCeEEEEecc---cccccccccceeccCc
Q psy12356 88 STNDQSFNIVDIKP---TN-M----E-ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR---AAALCDRHSKCLIEGT 155 (400)
Q Consensus 88 ss~D~tI~lWd~~~---~~-~----~-~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~---~~~~~~~~~~~~~~~~ 155 (400)
++.|++|+|||+.+ +. . . .|...|++++|+|++ ++|++++.|++|++||+. .+..... ..
T Consensus 82 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~-------~~ 153 (437)
T 3gre_A 82 GSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQQESEVKF-------LN 153 (437)
T ss_dssp EETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEEETTEEEE-------EE
T ss_pred ecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEEeccccCCceeec-------cc
Confidence 89999999999976 43 1 1 467789999999974 799999999999999995 3322111 10
Q ss_pred ccceeceeccCc-hhhh---h--hcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEE
Q psy12356 156 NCNCQGLIVPES-KREE---R--QSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISD 229 (400)
Q Consensus 156 ~~~~~~~~~~~~-~~~~---~--~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 229 (400)
...+..+.+.+. .... + ...+++...++++.||.|++||++++... ..+..+ .|...|.+
T Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~----------~h~~~v~~ 219 (437)
T 3gre_A 154 CECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL----QIIENS----------PRHGAVSS 219 (437)
T ss_dssp EEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE----EEEECC----------GGGCCEEE
T ss_pred cceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee----EEEccC----------CCCCceEE
Confidence 111111111110 0000 0 01245555666778999999999876532 222111 26789999
Q ss_pred EEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeec-CCC-----------cCCCCccc-CCCCCceeecCcccccceeec
Q psy12356 230 VKISNSGRYMISR-DYLCVKVWDLHMESRPVETYP-THT-----------KEENGQLR-DPSNITALRVPQIKPIELTVE 295 (400)
Q Consensus 230 v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~-~h~-----------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~ 295 (400)
++|+|++++|+++ .|++|+|||++++ .+++++. +|. +.++++++ +++.+++|++|++...+.
T Consensus 220 ~~~s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~--- 295 (437)
T 3gre_A 220 ICIDEECCVLILGTTRGIIDIWDIRFN-VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC--- 295 (437)
T ss_dssp EEECTTSCEEEEEETTSCEEEEETTTT-EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE---
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCc-cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE---
Confidence 9999999999974 6899999999985 4677664 442 33567654 578899999998854322
Q ss_pred cCccceeccccccceEEEEEcCCCcEEeecccchhhcc--cccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 296 ASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADA--HTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 296 ~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~g--h~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
.+.+ .+|...+..+.|+|+++.+.... ..| |...|.+++|+ ++++|+++ .|++|++||+..++
T Consensus 296 ---~~~~-~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 296 ---QYAF-INSDEQPSMEHFLPIEKGLEELN----FCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp ---EEEE-ESSSSCCCGGGGSCBCSSGGGCC----CCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGG
T ss_pred ---EEEE-EcCCCCCccceecccccccccce----ecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcc
Confidence 2222 46777788888998876552111 134 99999999999 88999997 69999999998755
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-29 Score=242.96 Aligned_cols=200 Identities=12% Similarity=0.134 Sum_probs=140.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+++|+||+++| +++.||+|+|||+.+++.. ........+|+ ..|++|+|+|+++ .
T Consensus 96 ~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~-------~~~~~~~~~h~------------~~V~~v~~spdg~--~ 153 (357)
T 4g56_B 96 GVTDVAWVSEKGIL-VASDSGAVELWEILEKESL-------LVNKFAKYEHD------------DIVKTLSVFSDGT--Q 153 (357)
T ss_dssp CEEEEEEETTTEEE-EEETTSCEEEC---------------CCCCEEECCCS------------SCEEEEEECSSSS--E
T ss_pred CEEEEEEcCCCCEE-EEECCCEEEEeecccccee-------EEEeeccCCCC------------CCEEEEEECCCCC--E
Confidence 48999999999755 5678999999999764311 00011233565 4599999999874 6
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++++.|++|+|||+++++ +..|...|++++|+|++..++++++.|++|++||+++++........ .....+.
T Consensus 154 l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~---~~~~~v~ 230 (357)
T 4g56_B 154 AVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC---ASDTIPT 230 (357)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT---TCCSCEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec---ccccccc
Confidence 7788999999999999886 34577889999999987778999999999999999988432211000 0001111
Q ss_pred ceeccCchhhhhhcccC-cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC-cE
Q psy12356 161 GLIVPESKREERQSSQN-RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG-RY 238 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg-~~ 238 (400)
.+.+ .|+ ...+++++.|+.|++||++++... +. +.+|...|.+|+|+|++ ++
T Consensus 231 ~v~~----------sp~~~~~la~g~~d~~i~~wd~~~~~~~----~~------------~~~~~~~v~~l~~sp~~~~~ 284 (357)
T 4g56_B 231 SVTW----------HPEKDDTFACGDETGNVSLVNIKNPDSA----QT------------SAVHSQNITGLAYSYHSSPF 284 (357)
T ss_dssp EEEE----------CTTSTTEEEEEESSSCEEEEESSCGGGC----EE------------ECCCSSCEEEEEECSSSSCC
T ss_pred chhh----------hhcccceEEEeecccceeEEECCCCcEe----EE------------EeccceeEEEEEEcCCCCCE
Confidence 2222 243 345566678999999999976532 11 34677899999999997 57
Q ss_pred EEE-ecCCeEEEEeCCCC
Q psy12356 239 MIS-RDYLCVKVWDLHME 255 (400)
Q Consensus 239 las-~~D~tIklWD~~~~ 255 (400)
||+ +.|++|+|||++++
T Consensus 285 lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 285 LASISEDCTVAVLDADFS 302 (357)
T ss_dssp EEEEETTSCEEEECTTSC
T ss_pred EEEEeCCCEEEEEECCCC
Confidence 776 46899999999875
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-28 Score=232.95 Aligned_cols=270 Identities=11% Similarity=0.020 Sum_probs=194.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|+|++||+|+.||+|+||++.+... ......+.+|. ..|.+++|+|++ .
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~--------~~~~~~~~~~~------------~~v~~~~~~~~~--~ 69 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK--------NVDLLQSLRYK------------HPLLCCNFIDNT--D 69 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT--------EEEEEEEEECS------------SCEEEEEEEESS--S
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc--------cccceeeeecC------------CceEEEEECCCC--C
Confidence 4689999999999999999999999999976421 11233455665 459999999975 3
Q ss_pred -eEEEeeCCCeEEEEEc-cCCC---ccc--ccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc---------ccccccc
Q psy12356 84 -HFLLSTNDQSFNIVDI-KPTN---MEE--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA---------AALCDRH 147 (400)
Q Consensus 84 -~~l~ss~D~tI~lWd~-~~~~---~~~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~---------~~~~~~~ 147 (400)
.+++++.|++|++||+ .+++ +.. |...|++++|+| + ++|++++.|++|++||+++ +......
T Consensus 70 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 147 (342)
T 1yfq_A 70 LQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT 147 (342)
T ss_dssp EEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS
T ss_pred cEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCCeeeEE
Confidence 4667889999999999 8776 345 778899999999 4 7899999999999999987 5322211
Q ss_pred cceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccc-ccccCcccccccCCCCCCCcccccccccC
Q psy12356 148 SKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRA-AALCDRHSKFFEEPEDPTNKSFFSEIISS 226 (400)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 226 (400)
. . ...+..+.+ .++. .+.++.|+.|++||++. +.... .. ....|...
T Consensus 148 ~-----~-~~~v~~~~~----------~~~~--l~~~~~d~~i~i~d~~~~~~~~~---~~-----------~~~~~~~~ 195 (342)
T 1yfq_A 148 K-----V-KNKIFTMDT----------NSSR--LIVGMNNSQVQWFRLPLCEDDNG---TI-----------EESGLKYQ 195 (342)
T ss_dssp S-----S-CCCEEEEEE----------CSSE--EEEEESTTEEEEEESSCCTTCCC---EE-----------EECSCSSC
T ss_pred e-----e-CCceEEEEe----------cCCc--EEEEeCCCeEEEEECCccccccc---ee-----------eecCCCCc
Confidence 0 0 011122222 2444 34445799999999987 43210 00 01245678
Q ss_pred eEEEEECC-CCcEEEE-ecCCeEEEEeCCCC-----CCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCcc
Q psy12356 227 ISDVKISN-SGRYMIS-RDYLCVKVWDLHME-----SRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPR 299 (400)
Q Consensus 227 V~~v~fSp-dg~~las-~~D~tIklWD~~~~-----~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~ 299 (400)
|.+++|+| +++++++ +.|+.|+|||++.. ..++..+.+|.....
T Consensus 196 i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 246 (342)
T 1yfq_A 196 IRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK----------------------------- 246 (342)
T ss_dssp EEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT-----------------------------
T ss_pred eeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccc-----------------------------
Confidence 99999999 9999986 46899999999876 256667766632110
Q ss_pred ceeccccccceEEEEEcCCCcEEeecccc----hh----------hccc-ccceeEEEEccCCCEEEEe-cCCe-EEEEe
Q psy12356 300 RIFANAHTYHINSISVNSDQLTVEASPRG----IF----------ADAH-TYHISSTSVNSDQETYLSA-DDLR-INLWH 362 (400)
Q Consensus 300 ~~~~~~~~~~i~~i~~s~dg~~~~~~~~~----~~----------~~gh-~~~V~~i~fspDg~~las~-~D~~-i~lW~ 362 (400)
..+|.+.|++++|+|||+++++.... +| ..+| ...|.+++ |||++||++ .|++ .+.|.
T Consensus 247 ---~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 247 ---DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp ---CCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred ---ccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 02466678889999998877754321 11 1477 99999999 999999997 6999 77776
Q ss_pred C
Q psy12356 363 L 363 (400)
Q Consensus 363 ~ 363 (400)
.
T Consensus 322 ~ 322 (342)
T 1yfq_A 322 I 322 (342)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=258.60 Aligned_cols=269 Identities=9% Similarity=0.003 Sum_probs=171.9
Q ss_pred eeEEEEEECCC------CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 4 YMREASQRFSD------GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 4 ~~v~~v~fspd------G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
+.|++|+|+|+ |.+||||+.||+|+|||+.++...........++..++.+|+ ..|.+++|+
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~------------~~v~sv~~s 275 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD------------SLITTFDFL 275 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT------------TCEEEEEES
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC------------CCEEEEEec
Confidence 46899999997 689999999999999999764211000000001223566776 459999999
Q ss_pred eccCCceEEEeeCCCeEEEEEccCCC-----cccccccEEEE--EEecCCCCEEEEEeCCCeEEEEecccccccccccce
Q psy12356 78 RRKNQAHFLLSTNDQSFNIVDIKPTN-----MEELNEVITAA--EFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKC 150 (400)
Q Consensus 78 p~~~~~~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv--~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~ 150 (400)
|++ .+++++.|++|+|||++++. +..|...|++| +|+|++.++|||+|.|++|||||++++........+
T Consensus 276 ~~~---~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~ 352 (524)
T 2j04_B 276 SPT---TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR 352 (524)
T ss_dssp SSS---EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEE
T ss_pred CCC---eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccc
Confidence 753 78889999999999998663 34577889999 567764378999999999999999987432211111
Q ss_pred eccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEE
Q psy12356 151 LIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDV 230 (400)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 230 (400)
... ..+.. +.++|++...++++.|++|+|||++.+.+. . .+.+|.+.|++|
T Consensus 353 ~~~---~~v~~----------v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~----~------------~l~gH~~~V~sv 403 (524)
T 2j04_B 353 FRG---SNLVP----------VVYCPQIYSYIYSDGASSLRAVPSRAAFAV----H------------PLVSRETTITAI 403 (524)
T ss_dssp CSC---CSCCC----------EEEETTTTEEEEECSSSEEEEEETTCTTCC----E------------EEEECSSCEEEE
T ss_pred ccc---Ccccc----------eEeCCCcCeEEEeCCCCcEEEEECcccccc----e------------eeecCCCceEEE
Confidence 000 01112 223466655666678999999999975431 1 134788999999
Q ss_pred EECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCC------------CcCCCCcccCCCCCceeecCcccccc-eeecc
Q psy12356 231 KISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTH------------TKEENGQLRDPSNITALRVPQIKPIE-LTVEA 296 (400)
Q Consensus 231 ~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h------------~~~~~g~~~~~~~~~~i~l~~~~~~~-~~~~~ 296 (400)
+|||+|++|+++ .|++|+|||+... .++.++.+ .+.++|+ .+++|+-.... ....+
T Consensus 404 a~Sp~g~~l~Sgs~Dgtv~lwd~~~~--~~~~~~~~~~~~~~~~v~~v~~sp~g~--------~~~~~~~~~~~~~~~~g 473 (524)
T 2j04_B 404 GVSRLHPMVLAGSADGSLIITNAARR--LLHGIKNSSATQKSLRLWKWDYSIKDD--------KYRIDSSYEVYPLTVND 473 (524)
T ss_dssp ECCSSCCBCEEEETTTEEECCBSCSS--TTTCC------CCCCEEEECBCCSSSC--------EEEECCCCCCCC-----
T ss_pred EeCCCCCeEEEEECCCEEEEEechHh--hccccccCccceeeeEEEEeccCCCCC--------eEEccCCceecccccCC
Confidence 999999999875 6999999998753 33332211 1223332 23333310000 00012
Q ss_pred CccceeccccccceEEEEEcCCCc---EEeeccc
Q psy12356 297 SPRRIFANAHTYHINSISVNSDQL---TVEASPR 327 (400)
Q Consensus 297 ~~~~~~~~~~~~~i~~i~~s~dg~---~~~~~~~ 327 (400)
..... +.+|...|++++|+||++ ++|++..
T Consensus 474 ~~~~~-l~gh~~~V~~Vafsp~~~~~~~lAsg~~ 506 (524)
T 2j04_B 474 VSKAK-IDAHGINITCTKWNETSAGGKCYAFSNS 506 (524)
T ss_dssp ---------CCCSCCCEEECCSTTTTTEEEEECT
T ss_pred cceee-ecCCCceEEEEECCCCCCccHHHHhhcc
Confidence 22222 357999999999999964 7776543
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-29 Score=244.52 Aligned_cols=257 Identities=16% Similarity=0.204 Sum_probs=178.5
Q ss_pred eeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCC
Q psy12356 47 NVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCN 122 (400)
Q Consensus 47 ~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~ 122 (400)
.+.+++++|+ ..|++++|+|+++ .+++++.|++|+|||+.+++ +..|...|.+++|+|++ +
T Consensus 57 ~~~~~l~gH~------------~~V~~~~~sp~~~--~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g-~ 121 (380)
T 3iz6_a 57 VCCRTLQGHS------------GKVYSLDWTPEKN--WIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNG-Q 121 (380)
T ss_dssp EEEEEECCCS------------SCEEEEEECTTSS--CEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTS-S
T ss_pred EEeecccccc------------cEEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCC-C
Confidence 4567889997 4599999999874 78889999999999998876 34567789999999985 7
Q ss_pred EEEEEeCCCeEEEEecccccccccccceeccCccc--ceeceeccCchhhhhhcccC-cceeecCCCCCeEEEeeccccc
Q psy12356 123 LFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC--NCQGLIVPESKREERQSSQN-RREKEDNRRKPAIRLCDMRAAA 199 (400)
Q Consensus 123 ~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~i~lWD~~~~~ 199 (400)
+||+++.|+++++||+.+.............+.++ .+.. +.+.++ ....++++.|++|++||++++.
T Consensus 122 ~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~----------~~~~~~~~~~l~s~s~D~~i~~wd~~~~~ 191 (380)
T 3iz6_a 122 SVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASS----------CQYVPDQETRLITGSGDQTCVLWDVTTGQ 191 (380)
T ss_dssp EEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCC----------CBCCSSSSSCEEEECTTSCEEEECTTTCC
T ss_pred EEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEE----------EEEecCCCCEEEEECCCCcEEEEEcCCCc
Confidence 99999999999999997642110000000001100 0111 112232 2335666789999999999865
Q ss_pred ccCcccccccCCCCCCCcccccccccCeEEEEECC-CCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCC
Q psy12356 200 LCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN-SGRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEEN 270 (400)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp-dg~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~ 270 (400)
.. ..+.. ....+|...|.+++|+| ++++++++ .|++|+|||++....+++.+.+|. +.|+
T Consensus 192 ~~----~~~~~-------~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~ 260 (380)
T 3iz6_a 192 RI----SIFGS-------EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD 260 (380)
T ss_dssp EE----EEECC-------CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT
T ss_pred EE----EEeec-------ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecC
Confidence 42 12211 01236888999999987 88898875 699999999986666788999995 4678
Q ss_pred Cccc-CCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCE
Q psy12356 271 GQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQET 349 (400)
Q Consensus 271 g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~ 349 (400)
|+++ +++.++++++|++...+.. ..+. .+ ++ ....+...|.+++|||+|++
T Consensus 261 ~~~l~s~s~D~~i~lwd~~~~~~~------~~~~-~~----------~~-----------~~~~~~~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 261 GQRFGTGSDDGTCRLFDMRTGHQL------QVYN-RE----------PD-----------RNDNELPIVTSVAFSISGRL 312 (380)
T ss_dssp SSEEEEECSSSCEEEEETTTTEEE------EEEC-CC----------CS-----------SSCCSSCSCSEEEECSSSSE
T ss_pred CCeEEEEcCCCeEEEEECCCCcEE------EEec-cc----------cc-----------ccccccCceEEEEECCCCCE
Confidence 8764 5788999999987432110 0110 00 00 00234556899999999999
Q ss_pred EEEe-cCCeEEEEeCccCC
Q psy12356 350 YLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 350 las~-~D~~i~lW~~~~~~ 367 (400)
|+++ .|++|++||+...+
T Consensus 313 l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 313 LFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp EEEECTTSCEEEEETTTCC
T ss_pred EEEEECCCCEEEEECCCCc
Confidence 9998 69999999987654
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=237.92 Aligned_cols=233 Identities=16% Similarity=0.208 Sum_probs=170.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+++|+|+|++||+|+.|++|++|++...... ........+.+|+ ..|.+++|+|++. .
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~-----~~~~~~~~~~~h~------------~~v~~~~~~~~~~--~ 168 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE-----NMAAKKKSVAMHT------------NYLSACSFTNSDM--Q 168 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC-----CSGGGCEEEEECS------------SCEEEEEECSSSS--E
T ss_pred CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc-----cccccceeeeccC------------CcEEEEEEeCCCC--E
Confidence 4789999999999999999999999998653211 1112234566776 3489999999864 7
Q ss_pred EEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCC-CCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
+++++.|++|+|||++++++ ..|...|.+++|+|+. +++|++++.|++|++||++++.....+..+ ...+
T Consensus 169 l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h-----~~~v 243 (354)
T 2pbi_B 169 ILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETH-----ESDV 243 (354)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCC-----SSCE
T ss_pred EEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-----CCCe
Confidence 88899999999999998873 4577889999998852 479999999999999999988432211100 0111
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+ ...|++...++++.|++|++||++..... ..+..+ .+...+.+++|+|+|++|
T Consensus 244 ~~v----------~~~p~~~~l~s~s~D~~v~lwd~~~~~~~----~~~~~~----------~~~~~~~~~~~s~~g~~l 299 (354)
T 2pbi_B 244 NSV----------RYYPSGDAFASGSDDATCRLYDLRADREV----AIYSKE----------SIIFGASSVDFSLSGRLL 299 (354)
T ss_dssp EEE----------EECTTSSEEEEEETTSCEEEEETTTTEEE----EEECCT----------TCCSCEEEEEECTTSSEE
T ss_pred EEE----------EEeCCCCEEEEEeCCCeEEEEECCCCcEE----EEEcCC----------CcccceeEEEEeCCCCEE
Confidence 222 23356666777788999999999875431 111110 223468999999999999
Q ss_pred EEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCc
Q psy12356 240 ISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQ 286 (400)
Q Consensus 240 as~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~ 286 (400)
+++ .|++|+|||+.++ .++..+.+|. ++|+|+++ +++.++++++|+
T Consensus 300 ~~g~~d~~i~vwd~~~~-~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 300 FAGYNDYTINVWDVLKG-SRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEETTSCEEEEETTTC-SEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCCcEEEEECCCC-ceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 975 6899999999876 4678888885 45777754 466777777763
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-29 Score=242.97 Aligned_cols=277 Identities=10% Similarity=0.129 Sum_probs=193.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|||++||+|+.||+|+|||+.+.. ...+.+..+.+|.. .|.+++|+|++ +.
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~-------~~~~~~~~~~~h~~------------~v~~~~~~~~~-~~ 127 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDNGSLELYSTNEAN-------NAINSMARFSNHSS------------SVKTVKFNAKQ-DN 127 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESSSCEEEECCSSTT-------SCCCEEEECCCSSS------------CCCEEEECSSS-TT
T ss_pred CceEEEEECCCCCeEEEEccCCeEEEeeccccc-------ccccchhhccCCcc------------ceEEEEEcCCC-CC
Confidence 468999999999999999999999999997521 01224567778873 49999999973 23
Q ss_pred eEEEeeCCCeEEEEEccCCC------c-------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN------M-------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKC 150 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~------~-------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~ 150 (400)
.+++++.|++|++||+.+++ . ..|...|.+++|+|+++.+|++++.|++|++||++++.........
T Consensus 128 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 207 (416)
T 2pm9_A 128 VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYT 207 (416)
T ss_dssp BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCC
T ss_pred EEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecc
Confidence 67778899999999998765 1 2356789999999986689999999999999999987542211100
Q ss_pred ecc-CcccceeceeccCchhhhhhcccCc-ceeecCCCCC---eEEEeecccccccCcccccccCCCCCCCccccc-ccc
Q psy12356 151 LIE-GTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKP---AIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS-EII 224 (400)
Q Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg---~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~ 224 (400)
... .....+..+.+ .+++ ...++++.|+ .|++||++.+... .. .+. +|.
T Consensus 208 ~~~~~~~~~v~~~~~----------~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~---~~------------~~~~~~~ 262 (416)
T 2pm9_A 208 SPNSGIKQQLSVVEW----------HPKNSTRVATATGSDNDPSILIWDLRNANTP---LQ------------TLNQGHQ 262 (416)
T ss_dssp CCSSCCCCCEEEEEE----------CSSCTTEEEEEECCSSSCCCCEEETTSTTSC---SB------------CCCSCCS
T ss_pred ccccccCCceEEEEE----------CCCCCCEEEEEECCCCCceEEEEeCCCCCCC---cE------------EeecCcc
Confidence 000 00111222222 3443 3455556677 9999999875321 11 133 677
Q ss_pred cCeEEEEECC-CCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCC-cc-cCCCCCceeecCccccccee
Q psy12356 225 SSISDVKISN-SGRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENG-QL-RDPSNITALRVPQIKPIELT 293 (400)
Q Consensus 225 ~~V~~v~fSp-dg~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g-~~-~~~~~~~~i~l~~~~~~~~~ 293 (400)
..|.+++|+| ++++|+++ .|++|+|||++++ .++..+.+|. +.+++ .+ ++++.++.+++|++......
T Consensus 263 ~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 263 KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA-EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp SCEEEEEECSSCSSCEEEEESSSEEEEECSSSC-CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC-ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 8999999999 89999875 6899999999986 4788888885 46787 44 46888999999998644321
Q ss_pred eccC---------cccee-------------------ccccccceEEEEEcCCCcEEeecc
Q psy12356 294 VEAS---------PRRIF-------------------ANAHTYHINSISVNSDQLTVEASP 326 (400)
Q Consensus 294 ~~~~---------~~~~~-------------------~~~~~~~i~~i~~s~dg~~~~~~~ 326 (400)
.... ....+ ...|...+..++|+|||+++++..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~ 402 (416)
T 2pm9_A 342 LDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITP 402 (416)
T ss_dssp SCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCT
T ss_pred cccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeC
Confidence 1000 00000 001556678999999999998655
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=246.88 Aligned_cols=263 Identities=11% Similarity=0.003 Sum_probs=153.2
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe-------
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR------- 78 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp------- 78 (400)
+....+++++++||+|+.|++|+|||+.+++. ....++.++.+|+ +.|++|+|+|
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~------~~~~~~~~~~gH~------------~~v~~v~~~p~~~~~~~ 153 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETI------ITQHVLGGKSGHH------------NFVNDIDIADVYSADNR 153 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEE------EEEEEECTTTSCS------------SCEEEEEEEEEECTTCS
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCcc------ceeeeecccCCCC------------CceEEEEEccccccccC
Confidence 34455677889999999999999999876421 1122345677887 4599999998
Q ss_pred -ccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 79 -RKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 79 -~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
++ ..++++|.|++|||||+.++. +..|...|.+++|+|++.++|++++.|++|++||++++............
T Consensus 154 ~d~--~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 154 LAE--QVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp EEE--EEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred CCC--CEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 33 255668899999999997765 24567789999999987678999999999999999988532211000000
Q ss_pred Ccc-------cceeceeccCchhhh---hh-cccCcceeecCCCCCeEEEeecccccccCcccccccCCC--------CC
Q psy12356 154 GTN-------CNCQGLIVPESKREE---RQ-SSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPE--------DP 214 (400)
Q Consensus 154 ~~~-------~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~--------~~ 214 (400)
... ..........++... +. ..+++...++++.|+++++||++.+.... .+..+. .+
T Consensus 232 ~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~----~l~~~~~~~~~~~~~~ 307 (393)
T 4gq1_A 232 KNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN----EISDSTMKLGPKNLLP 307 (393)
T ss_dssp SCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------CCSC
T ss_pred ccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCc----eEeeecCccccEEEcc
Confidence 000 000000000000011 11 12566666777899999999998754321 111000 00
Q ss_pred CCcccccccccCeEEEEECC--CCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccc
Q psy12356 215 TNKSFFSEIISSISDVKISN--SGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIE 291 (400)
Q Consensus 215 ~~~~~~~~h~~~V~~v~fSp--dg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~ 291 (400)
..+ ....+ .....+.|+| ++.+++++ .|++|+|||+.++. ++..+
T Consensus 308 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~-~~~~~----------------------------- 355 (393)
T 4gq1_A 308 NVQ-GISLF-PSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD-SNSIP----------------------------- 355 (393)
T ss_dssp SEE-EECSS-CCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT-CCEEE-----------------------------
T ss_pred ccc-ccccc-CcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc-EEEEe-----------------------------
Confidence 000 00111 1222333443 33355554 57888888887642 21111
Q ss_pred eeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEecCCeEEEEeCc
Q psy12356 292 LTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSADDLRINLWHLE 364 (400)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~ 364 (400)
.+|...|.+|+|||||++||++.++.+.+|++.
T Consensus 356 ----------------------------------------~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 356 ----------------------------------------IQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp ----------------------------------------EECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred ----------------------------------------cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 145667999999999999999876677788765
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=231.89 Aligned_cols=232 Identities=12% Similarity=0.162 Sum_probs=171.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|||++||+|+.|++|+|||+.++ +.++.+.+|.. .|.+++|+|++.
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~-----------~~~~~~~~h~~------------~v~~~~~~~~~~-- 120 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATG-----------ETYQRFVGHKS------------DVMSVDIDKKAS-- 120 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTT-----------EEEEEEECCSS------------CEEEEEECTTSC--
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCCC-----------CeeEEEccCCC------------cEEEEEEcCCCC--
Confidence 46899999999999999999999999999753 34667889974 499999999864
Q ss_pred eEEEeeCCCeEEEEEccCCC---cccccccEEEEEEecCC-----CCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN---MEELNEVITAAEFHPID-----CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~---~~~~~~~V~sv~f~p~~-----~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.+++++.|++|+|||++... +..|...|.+++|+|.. ..++++++.|++|++||+++......+..+
T Consensus 121 ~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h----- 195 (319)
T 3frx_A 121 MIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH----- 195 (319)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCC-----
T ss_pred EEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCC-----
Confidence 77788999999999997654 34567789999999853 347999999999999999887432211100
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
...+..+ ..+|++...++++.||+|++||++.+... ..+ .+...|.+++|+|+
T Consensus 196 ~~~v~~~----------~~sp~g~~l~s~~~dg~i~iwd~~~~~~~----~~~-------------~~~~~v~~~~~sp~ 248 (319)
T 3frx_A 196 NSNINTL----------TASPDGTLIASAGKDGEIMLWNLAAKKAM----YTL-------------SAQDEVFSLAFSPN 248 (319)
T ss_dssp CSCEEEE----------EECTTSSEEEEEETTCEEEEEETTTTEEE----EEE-------------ECCSCEEEEEECSS
T ss_pred CCcEEEE----------EEcCCCCEEEEEeCCCeEEEEECCCCcEE----EEe-------------cCCCcEEEEEEcCC
Confidence 0112222 23467767777788999999999876532 111 12367999999999
Q ss_pred CcEEEEecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEE
Q psy12356 236 GRYMISRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISV 315 (400)
Q Consensus 236 g~~las~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 315 (400)
|++|+++.+..+++|++... ..+..+..+.. + ....|...+.+++|
T Consensus 249 ~~~la~~~~~~i~v~~~~~~-~~~~~~~~~~~----------------------------~-----~~~~~~~~v~~~~~ 294 (319)
T 3frx_A 249 RYWLAAATATGIKVFSLDPQ-YLVDDLRPEFA----------------------------G-----YSKAAEPHAVSLAW 294 (319)
T ss_dssp SSEEEEEETTEEEEEEETTE-EEEEEECCCCT----------------------------T-----CCGGGCCCEEEEEE
T ss_pred CCEEEEEcCCCcEEEEeCcC-eeeeccCcccc----------------------------c-----cccCcCcceeEEEE
Confidence 99999887888999999864 23444432210 0 01235566889999
Q ss_pred cCCCcEEeecc
Q psy12356 316 NSDQLTVEASP 326 (400)
Q Consensus 316 s~dg~~~~~~~ 326 (400)
+|||++|++.+
T Consensus 295 spdg~~l~sg~ 305 (319)
T 3frx_A 295 SADGQTLFAGY 305 (319)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEee
Confidence 99999987654
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=241.62 Aligned_cols=293 Identities=10% Similarity=0.074 Sum_probs=192.3
Q ss_pred EEEEEECCCCCe-EEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe-ccCCc
Q psy12356 6 REASQRFSDGEL-LATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR-RKNQA 83 (400)
Q Consensus 6 v~~v~fspdG~~-Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp-~~~~~ 83 (400)
...++++|+... +++++.||.|+||++...... .+.+..+.+|. ..|.+++|+| +++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~-------~~~~~~~~~h~------------~~V~~~~~~p~~~~-- 95 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV-------DKNVPLVCGHT------------APVLDIAWCPHNDN-- 95 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC-------CTTCCCBCCCS------------SCEEEEEECTTCTT--
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC-------CCCCceEecCC------------CCEEEEEeCCCCCC--
Confidence 446888998754 446889999999998653210 01234567787 4599999999 543
Q ss_pred eEEEeeCCCeEEEEEccCCC-----------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceec
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-----------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLI 152 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-----------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~ 152 (400)
.+++++.|++|+|||+.++. +..|...|++++|+|++.++|++++.|++|++||++++........ .
T Consensus 96 ~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~ 173 (402)
T 2aq5_A 96 VIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP--D 173 (402)
T ss_dssp EEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT--T
T ss_pred EEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec--C
Confidence 77788999999999998763 2346778999999998667999999999999999998843221100 0
Q ss_pred cCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccC-eEEEE
Q psy12356 153 EGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISS-ISDVK 231 (400)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~ 231 (400)
.. ...+..+.+ .+++...++++.||.|++||++++... ..+ ..+|.+. +.+++
T Consensus 174 ~~-~~~v~~~~~----------~~~~~~l~~~~~d~~i~iwd~~~~~~~----~~~-----------~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 174 VH-PDTIYSVDW----------SRDGALICTSCRDKRVRVIEPRKGTVV----AEK-----------DRPHEGTRPVHAV 227 (402)
T ss_dssp TC-CSCEEEEEE----------CTTSSCEEEEETTSEEEEEETTTTEEE----EEE-----------ECSSCSSSCCEEE
T ss_pred CC-CCceEEEEE----------CCCCCEEEEEecCCcEEEEeCCCCcee----eee-----------ccCCCCCcceEEE
Confidence 00 111222222 356656666778999999999976532 111 0245454 88999
Q ss_pred ECCCCcEEEEe----cCCeEEEEeCCCCCCceeeec-CCC-------cCCCCccc--CCCCCceeecCcccccceeeccC
Q psy12356 232 ISNSGRYMISR----DYLCVKVWDLHMESRPVETYP-THT-------KEENGQLR--DPSNITALRVPQIKPIELTVEAS 297 (400)
Q Consensus 232 fSpdg~~las~----~D~tIklWD~~~~~~~l~~~~-~h~-------~~~~g~~~--~~~~~~~i~l~~~~~~~~~~~~~ 297 (400)
|+|+|++|+++ .|++|++||++++..++..+. .|. +.++|+++ +++.++.|++|++...+..
T Consensus 228 ~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~---- 303 (402)
T 2aq5_A 228 FVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF---- 303 (402)
T ss_dssp ECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC----
T ss_pred EcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc----
Confidence 99999999875 689999999998755444432 121 23444432 1233444444443211100
Q ss_pred ccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEecCCeEEEEeCccCCeeEEEEeecC
Q psy12356 298 PRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSADDLRINLWHLEITDQSFNIVDIKP 377 (400)
Q Consensus 298 ~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~~~~~~~~~~~~~ 377 (400)
+..+ ....|...|.+++|+||++++++ .|+.+++|++.. ..+-++...-|
T Consensus 304 ------------~~~l----------------~~~~~~~~v~~~~~sp~~~~~~s-~~~~~~~~~l~~-~~~~~i~~~~p 353 (402)
T 2aq5_A 304 ------------LHYL----------------SMFSSKESQRGMGYMPKRGLEVN-KCEIARFYKLHE-RKCEPIAMTVP 353 (402)
T ss_dssp ------------EEEE----------------EEECCSSCCSEEEECCGGGSCGG-GTEEEEEEEEET-TEEEEEEEECC
T ss_pred ------------eEee----------------cccccCCcccceEEeccccccee-cceeEEEEEcCC-CcEEEEEEEcc
Confidence 0000 00125688999999999998876 455999999985 44556666666
Q ss_pred Cccc
Q psy12356 378 TNME 381 (400)
Q Consensus 378 ~~~~ 381 (400)
.+-+
T Consensus 354 r~~~ 357 (402)
T 2aq5_A 354 RKSD 357 (402)
T ss_dssp CCCS
T ss_pred cchh
Confidence 6543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=238.83 Aligned_cols=267 Identities=12% Similarity=0.131 Sum_probs=181.0
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeec-cCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+.+++|++ +.+++++.||+|+|||..++. ....+.. |. ..|.+++|+|++. .
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~-----------~~~~~~~~~~------------~~v~~v~~s~~~~--~ 148 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGS-----------VSALAETDES------------TYVASVKWSHDGS--F 148 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCC-----------EEEEEECCTT------------CCEEEEEECTTSS--E
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCc-----------EeEeeecCCC------------CCEEEEEECCCCC--E
Confidence 44567775 457788899999999998643 2233333 44 4599999999864 6
Q ss_pred EEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc-cccccceeccCcccce
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL-CDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~-~~~~~~~~~~~~~~~~ 159 (400)
+++++.|++|+|||+.+++ +..|...|.+++|++ ++|++++.|++|++||++.... ... +... ...+
T Consensus 149 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~-~~~v 220 (401)
T 4aez_A 149 LSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGT----LQGH-SSEV 220 (401)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEE----EECC-SSCE
T ss_pred EEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeE----EcCC-CCCe
Confidence 7778899999999998876 345778899999964 5899999999999999985421 111 0000 0111
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc-E
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR-Y 238 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~-~ 238 (400)
..+. ..+++...++++.||.|++||++++... .. +.+|...|.+++|+|++. +
T Consensus 221 ~~~~----------~~~~~~~l~s~~~d~~v~iwd~~~~~~~----~~------------~~~~~~~v~~~~~~p~~~~l 274 (401)
T 4aez_A 221 CGLA----------WRSDGLQLASGGNDNVVQIWDARSSIPK----FT------------KTNHNAAVKAVAWCPWQSNL 274 (401)
T ss_dssp EEEE----------ECTTSSEEEEEETTSCEEEEETTCSSEE----EE------------ECCCSSCCCEEEECTTSTTE
T ss_pred eEEE----------EcCCCCEEEEEeCCCeEEEccCCCCCcc----EE------------ecCCcceEEEEEECCCCCCE
Confidence 2222 2356666667778999999999875421 11 235778999999999876 5
Q ss_pred EEEe---cCCeEEEEeCCCCCCceeeecCCC------cCCCCccc-C--CCCCceeecCcccccceeeccCccceecccc
Q psy12356 239 MISR---DYLCVKVWDLHMESRPVETYPTHT------KEENGQLR-D--PSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 239 las~---~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~~-~--~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
++++ .|++|++||++++ .++..+..+. +.++|+++ + ++.++.+++|++...+.
T Consensus 275 l~~~~gs~d~~i~i~d~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~-------------- 339 (401)
T 4aez_A 275 LATGGGTMDKQIHFWNAATG-ARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL-------------- 339 (401)
T ss_dssp EEEECCTTTCEEEEEETTTC-CEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE--------------
T ss_pred EEEecCCCCCEEEEEECCCC-CEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc--------------
Confidence 5554 3899999999986 4666665332 23444432 1 22445555544311000
Q ss_pred ccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 307 TYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 307 ~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
.... ...+|...|.+++|+|||++|+++ .|++|++|++..++
T Consensus 340 ---~~~~----------------~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 340 ---TKQV----------------DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp ---EEEE----------------EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred ---eeEE----------------EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 0000 014799999999999999999997 69999999998655
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=238.44 Aligned_cols=284 Identities=10% Similarity=0.138 Sum_probs=204.7
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
+.+ ++++|++||+|+.||+|+|||+.++ +.+..+.+|.. .|.+++|++ ..+
T Consensus 122 ~~~--~~~~g~~l~sg~~dg~i~vwd~~~~-----------~~~~~~~~h~~------------~v~~~~~~~----~~l 172 (445)
T 2ovr_B 122 ITC--LQFCGNRIVSGSDDNTLKVWSAVTG-----------KCLRTLVGHTG------------GVWSSQMRD----NII 172 (445)
T ss_dssp EEE--EEEETTEEEEEETTSCEEEEETTTC-----------CEEEECCCCSS------------CEEEEEEET----TEE
T ss_pred EEE--EEEcCCEEEEEECCCcEEEEECCCC-----------cEEEEEcCCCC------------CEEEEEecC----CEE
Confidence 455 4557999999999999999999754 34567888874 489999973 278
Q ss_pred EEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 86 LLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
++++.|++|++||+++++ +..|...|.+++|++ +.+++++.|++|++||++++........ .. ..+..
T Consensus 173 ~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~----~~-~~v~~ 244 (445)
T 2ovr_B 173 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMG----HV-AAVRC 244 (445)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEEC----CS-SCEEE
T ss_pred EEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcC----Cc-ccEEE
Confidence 888999999999998886 345778899999975 4799999999999999998743221110 00 01111
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las 241 (400)
+. .++...++++.||.|++||++++... .. +.+|...|.+++| +++++++
T Consensus 245 ~~------------~~~~~l~~~~~dg~i~iwd~~~~~~~----~~------------~~~~~~~v~~~~~--~~~~l~~ 294 (445)
T 2ovr_B 245 VQ------------YDGRRVVSGAYDFMVKVWDPETETCL----HT------------LQGHTNRVYSLQF--DGIHVVS 294 (445)
T ss_dssp EE------------ECSSCEEEEETTSCEEEEEGGGTEEE----EE------------ECCCSSCEEEEEE--CSSEEEE
T ss_pred EE------------ECCCEEEEEcCCCEEEEEECCCCcEe----EE------------ecCCCCceEEEEE--CCCEEEE
Confidence 11 12333455667999999999876432 11 2367789999999 8888886
Q ss_pred -ecCCeEEEEeCCCCCCceeeecCCCc-----CCCCcc-cCCCCCceeecCcccccceeeccCccceec--cccccceEE
Q psy12356 242 -RDYLCVKVWDLHMESRPVETYPTHTK-----EENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFA--NAHTYHINS 312 (400)
Q Consensus 242 -~~D~tIklWD~~~~~~~l~~~~~h~~-----~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ 312 (400)
+.|++|++||++++ .++..+.+|.. .+++.+ ++++.++.+++|++...+.. ..+. .+|...|.+
T Consensus 295 ~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~------~~~~~~~~~~~~v~~ 367 (445)
T 2ovr_B 295 GSLDTSIRVWDVETG-NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCL------QTLQGPNKHQSAVTC 367 (445)
T ss_dssp EETTSCEEEEETTTC-CEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEE------EEECSTTSCSSCEEE
T ss_pred EeCCCeEEEEECCCC-CEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEE------EEEccCCCCCCCEEE
Confidence 46999999999986 47888888852 234444 45678899999987543321 1221 237788999
Q ss_pred EEEcCCCcEEeeccc----ch-----------h----hcccccceeEEEEccCCCEEEEe-cCCe----EEEEeCcc
Q psy12356 313 ISVNSDQLTVEASPR----GI-----------F----ADAHTYHISSTSVNSDQETYLSA-DDLR----INLWHLEI 365 (400)
Q Consensus 313 i~~s~dg~~~~~~~~----~~-----------~----~~gh~~~V~~i~fspDg~~las~-~D~~----i~lW~~~~ 365 (400)
++|+ ++++++++. ++ + ..+|...|.+++|+|+|..||++ .|++ |.+||++.
T Consensus 368 ~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 368 LQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 9995 456654331 11 1 13788999999999999999997 6887 99999874
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-28 Score=235.30 Aligned_cols=250 Identities=12% Similarity=0.175 Sum_probs=170.5
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+|+|+|||++||+|+.|++|+||+.... ..+.+.++.+|+. .|.+++|+|+++
T Consensus 62 ~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~---------~~~~~~~~~~h~~------------~v~~v~~sp~~~-- 118 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYLASASFDATTCIWKKNQD---------DFECVTTLEGHEN------------EVKSVAWAPSGN-- 118 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEECCC----------EEEEEEECCCSS------------CEEEEEECTTSS--
T ss_pred CcEEEEEECCCCCEEEEEECCCcEEEEEccCC---------CeEEEEEccCCCC------------CceEEEEeCCCC--
Confidence 46899999999999999999999999998753 2345667888874 499999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.+++++.|++|+|||++++. +..|...|.+++|+|++ .+|++++.|++|++||++++... +...+.+
T Consensus 119 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~~-----~~~~~~~ 192 (345)
T 3fm0_A 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWV-----CCATLEG 192 (345)
T ss_dssp EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEEE-----EEEEECC
T ss_pred EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCEE-----EEEEecC
Confidence 77788999999999998763 23567789999999985 78999999999999999876321 1111111
Q ss_pred --cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc-ccccCeEEEEEC
Q psy12356 157 --CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS-EIISSISDVKIS 233 (400)
Q Consensus 157 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~fS 233 (400)
..+..+.+ .|++...++++.|++|++||.+........ ..............+. .|...|.+++|+
T Consensus 193 h~~~v~~l~~----------sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 261 (345)
T 3fm0_A 193 HESTVWSLAF----------DPSGQRLASCSDDRTVRIWRQYLPGNEQGV-ACSGSDPSWKCICTLSGFHSRTIYDIAWC 261 (345)
T ss_dssp CSSCEEEEEE----------CTTSSEEEEEETTSCEEEEEEECTTCTTCC-CCC---CEEEEEEEECSSCSSCEEEEEEC
T ss_pred CCCceEEEEE----------CCCCCEEEEEeCCCeEEEeccccCCCCccc-eeeccCCccceeEEecCCCCCcEEEEEEe
Confidence 12223333 466666777788999999997643221100 0000000000000012 277899999999
Q ss_pred CCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEE
Q psy12356 234 NSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINS 312 (400)
Q Consensus 234 pdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 312 (400)
|++..|++ +.|++|++||......+... ...+. .....+|...|++
T Consensus 262 ~~~~~l~s~~~d~~i~vw~~~~~~~~~~~-----------------~~~~~----------------~~~~~~h~~~V~~ 308 (345)
T 3fm0_A 262 QLTGALATACGDDAIRVFQEDPNSDPQQP-----------------TFSLT----------------AHLHQAHSQDVNC 308 (345)
T ss_dssp TTTCCEEEEETTSCEEEEEECTTSCTTSC-----------------CEEEE----------------EEETTSSSSCEEE
T ss_pred cCCCEEEEEeCCCeEEEEEeCCCCCccee-----------------eEEEE----------------eeecccccCcEeE
Confidence 99999986 57999999998864321100 00000 0012468889999
Q ss_pred EEEcCCCc-EEeecc
Q psy12356 313 ISVNSDQL-TVEASP 326 (400)
Q Consensus 313 i~~s~dg~-~~~~~~ 326 (400)
++|+|++. +|++.+
T Consensus 309 v~~~p~~~~~laS~s 323 (345)
T 3fm0_A 309 VAWNPKEPGLLASCS 323 (345)
T ss_dssp EEECSSSTTEEEEEE
T ss_pred eEEeCCCceEEEEcC
Confidence 99999974 776543
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=235.60 Aligned_cols=242 Identities=12% Similarity=0.114 Sum_probs=157.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++|+|+|+|++||+|+.|++|+|||+.+.... ....+++..+.+|+. .|.+|+|+|+++
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~----~~~~~~~~~~~~h~~------------~V~~v~~sp~g~-- 120 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR----TFEMDLLAIIEGHEN------------EVKGVAWSNDGY-- 120 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-----------CCCEEEEEEC----------------CEEEEEECTTSC--
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc----cccceeEEEEcCCCC------------cEEEEEECCCCC--
Confidence 36899999999999999999999999998642100 012345667888873 499999999874
Q ss_pred eEEEeeCCCeEEEEEccC-CC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKP-TN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~-~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.+++++.|++|+|||+.. +. +..|...|++++|+|++ .+|++++.|++|++||++++.. .++..+.
T Consensus 121 ~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~-----~~~~~~~ 194 (330)
T 2hes_X 121 YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDW-----ECVAVLN 194 (330)
T ss_dssp EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEE-----EEEEEEC
T ss_pred EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCe-----eEEEEcc
Confidence 677789999999999943 21 24577889999999985 7999999999999999876521 1111111
Q ss_pred c--cceeceeccCchhhhhhcccC--cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc-ccccCeEEE
Q psy12356 156 N--CNCQGLIVPESKREERQSSQN--RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS-EIISSISDV 230 (400)
Q Consensus 156 ~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v 230 (400)
. ..++.+.++ ++ +...++++.|++|++||++.+..... ..+. ....+. .|...|.+|
T Consensus 195 ~h~~~v~~~~~~----------~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~--~~~~------~~~~~~~~h~~~v~~v 256 (330)
T 2hes_X 195 GHEGTVWSSDFD----------KTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ--QEWV------CEAILPDVHKRQVYNV 256 (330)
T ss_dssp CCSSCEEEEEEC----------CSSSSCEEEEEETTSCEEEEEEEEECTTSC--EEEE------EEEECCSCCSSCEEEE
T ss_pred CCCCcEEEEEec----------CCCCeeEEEEEeCCCeEEEEEecCCCcccc--ceeE------EeeecccccccceEEE
Confidence 1 122233332 43 44566777899999999986532110 0000 000112 377899999
Q ss_pred EECCCCcEEEEecCCeEEEEeCCCCC-Ccee-eecCCC--------cCC--CCccc-CCCCCceeecCcc
Q psy12356 231 KISNSGRYMISRDYLCVKVWDLHMES-RPVE-TYPTHT--------KEE--NGQLR-DPSNITALRVPQI 287 (400)
Q Consensus 231 ~fSpdg~~las~~D~tIklWD~~~~~-~~l~-~~~~h~--------~~~--~g~~~-~~~~~~~i~l~~~ 287 (400)
+|+|++.+++++.|++|+|||..++. .++. .+.+|. +.+ ++.++ +++.+++|++|++
T Consensus 257 ~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 257 AWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp EECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred EEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 99988754445689999999998652 1222 234553 234 45543 4677778877765
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-28 Score=232.31 Aligned_cols=275 Identities=12% Similarity=0.083 Sum_probs=186.4
Q ss_pred eeEEEEEECCC---CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 4 YMREASQRFSD---GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 4 ~~v~~v~fspd---G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
..|++++|+|+ |++||+|+.||+|+|||+.+.. ......+.+|. ..|.+++|+|++
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~~~h~------------~~v~~~~~~~~~ 98 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---------QTIPKAQQMHT------------GPVLDVCWSDDG 98 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS---------CEEEEEEEECS------------SCEEEEEECTTS
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC---------ceeEEEecccc------------CCEEEEEECcCC
Confidence 57999999999 6999999999999999998521 12335677887 359999999976
Q ss_pred CCceEEEeeCCCeEEEEEccCCCc---ccccccEEEEEE--ecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 81 NQAHFLLSTNDQSFNIVDIKPTNM---EELNEVITAAEF--HPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 81 ~~~~~l~ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f--~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
+ .+++++.|++|++||+++++. ..|...|++++| +|++ ++|++++.|++|++||++++......... .
T Consensus 99 ~--~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~ 171 (368)
T 3mmy_A 99 S--KVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNPMMVLQLP----E 171 (368)
T ss_dssp S--EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSCSEEEECS----S
T ss_pred C--EEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcEEEEEecC----C
Confidence 4 677889999999999998873 356788999999 8864 78999999999999999988543211100 0
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
....... .... ...++.++.+++||++...... .... ..+...+..+++.++
T Consensus 172 --~~~~~~~----------~~~~--~~~~~~~~~i~~~~~~~~~~~~---~~~~-----------~~~~~~~~~~~~~~~ 223 (368)
T 3mmy_A 172 --RCYCADV----------IYPM--AVVATAERGLIVYQLENQPSEF---RRIE-----------SPLKHQHRCVAIFKD 223 (368)
T ss_dssp --CEEEEEE----------ETTE--EEEEEGGGCEEEEECSSSCEEE---EECC-----------CSCSSCEEEEEEEEC
T ss_pred --CceEEEe----------cCCe--eEEEeCCCcEEEEEeccccchh---hhcc-----------ccccCCCceEEEccc
Confidence 0000000 1112 2223358899999998643211 1111 012234555665554
Q ss_pred CcE----EEE-ecCCeEEEEeCCCCC--CceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceecccccc
Q psy12356 236 GRY----MIS-RDYLCVKVWDLHMES--RPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTY 308 (400)
Q Consensus 236 g~~----las-~~D~tIklWD~~~~~--~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~ 308 (400)
+.. +++ +.|+.|++||++... .++..+.+|..... .....+|.+
T Consensus 224 ~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~ 274 (368)
T 3mmy_A 224 KQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT-----------------------------NTSAPQDIY 274 (368)
T ss_dssp TTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC---------------------------------CCCEEEC
T ss_pred CCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccc-----------------------------ccccccccc
Confidence 442 554 679999999999763 24556666631100 000135677
Q ss_pred ceEEEEEcCCCcEEeeccc----chh----------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 309 HINSISVNSDQLTVEASPR----GIF----------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 309 ~i~~i~~s~dg~~~~~~~~----~~~----------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
.|.+++|+|||+++++.+. ++| ..+|...|.+++|||||++||++ .|+..+.|++
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 8999999999988876432 111 14899999999999999999996 5655444443
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-28 Score=257.95 Aligned_cols=261 Identities=13% Similarity=0.164 Sum_probs=183.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|++++|+|||++||+|+.||+|+|||+.++ ..+....+.+|. ..|.+++|+|+..+.
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~---------~~~~~~~l~~h~------------~~V~~l~~s~~~~~~ 68 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE---------THKLIDTLTGHE------------GPVWRVDWAHPKFGT 68 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETT---------EEEEEEEECCCS------------SCEEEEEECCTTSCS
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCC---------CCccceeccCCc------------CceEEEEecCCCCCC
Confidence 57999999999999999999999999998742 234566788887 359999999873234
Q ss_pred eEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCC-CCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPID-CNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~-~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.+++++.|++|++||+.++. ...|...|++++|+|++ ++++++++.||+|++||++++...... ..... .
T Consensus 69 ~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~--~~~~~-~ 145 (753)
T 3jro_A 69 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI--IIDAH-A 145 (753)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE--EEECC-S
T ss_pred EEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee--EeecC-C
Confidence 77788999999999998875 23467789999999972 478999999999999999887321110 00000 1
Q ss_pred cceeceeccCch---hhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 157 CNCQGLIVPESK---REERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 157 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
..+..+.+.+.. .......+++...++++.||+|++||++.+....... ..+.+|...|.+++|+
T Consensus 146 ~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~------------~~~~~h~~~V~~l~~s 213 (753)
T 3jro_A 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE------------STLEGHSDWVRDVAWS 213 (753)
T ss_dssp SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEE------------EEECCCSSCEEEEEEC
T ss_pred CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceee------------eeecCCCCcEEEEEec
Confidence 112222222100 0000011234556667789999999998753211111 1134788999999999
Q ss_pred CC---CcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 234 NS---GRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 234 pd---g~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
|+ |++|+++ .|++|++||++++..+.... + ..
T Consensus 214 p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~-------------------~--------------------~~----- 249 (753)
T 3jro_A 214 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKT-------------------L--------------------LK----- 249 (753)
T ss_dssp CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCC-------------------B--------------------SS-----
T ss_pred cCCCCCCEEEEEecCCEEEEecCCCCCCcceeE-------------------E--------------------ec-----
Confidence 99 8999875 69999999998753211000 0 00
Q ss_pred eEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCcc
Q psy12356 310 INSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~ 365 (400)
..+|...|.+++|+|||++|+++ .|++|++|++..
T Consensus 250 ---------------------~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 250 ---------------------EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp ---------------------SSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred ---------------------cCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 02467788999999999999997 699999999874
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=230.18 Aligned_cols=226 Identities=11% Similarity=0.145 Sum_probs=161.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+|+|.+||||+.|++|+|||+.++ +.+..+.+|.. .|.+++|+|++.
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~-----------~~~~~~~~h~~------------~v~~v~~sp~~~-- 131 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTG-----------TTYKRFVGHQS------------EVYSVAFSPDNR-- 131 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSS-----------CEEEEEECCCS------------CEEEEEECSSTT--
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCC-----------cEEEEEcCCCC------------cEEEEEECCCCC--
Confidence 35899999999999999999999999999854 24567888874 499999999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCCC---------CEEEEEeCCCeEEEEeccccccccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDC---------NLFVYSSSKGTIRLCDMRAAALCDRHS 148 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~---------~~las~s~Dg~i~lWD~~~~~~~~~~~ 148 (400)
.+++++.|++|+|||+..... ..|...|.+++|+|++. .+|++++.|++|++||.... ....
T Consensus 132 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~-- 208 (343)
T 2xzm_R 132 QILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ-IRYT-- 208 (343)
T ss_dssp EEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE-EEEE--
T ss_pred EEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCc-eeEE--
Confidence 777889999999999974321 24667899999999752 58999999999999995433 1110
Q ss_pred ceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeE
Q psy12356 149 KCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
+..+ ...+..+ ..+|++...++++.||+|++||++...... ..+ .+...|.
T Consensus 209 --~~~h-~~~v~~~----------~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~---~~~-------------~~~~~v~ 259 (343)
T 2xzm_R 209 --FKAH-ESNVNHL----------SISPNGKYIATGGKDKKLLIWDILNLTYPQ---REF-------------DAGSTIN 259 (343)
T ss_dssp --EECC-SSCEEEE----------EECTTSSEEEEEETTCEEEEEESSCCSSCS---EEE-------------ECSSCEE
T ss_pred --EcCc-cccceEE----------EECCCCCEEEEEcCCCeEEEEECCCCcccc---eee-------------cCCCcEE
Confidence 0000 0112222 234677677778899999999996432110 111 2335699
Q ss_pred EEEECCCCcEEEEecCCeEEEEeCCCCCCcee--eec-----------CCC-------cCCCCccc-CCCCCceeecCcc
Q psy12356 229 DVKISNSGRYMISRDYLCVKVWDLHMESRPVE--TYP-----------THT-------KEENGQLR-DPSNITALRVPQI 287 (400)
Q Consensus 229 ~v~fSpdg~~las~~D~tIklWD~~~~~~~l~--~~~-----------~h~-------~~~~g~~~-~~~~~~~i~l~~~ 287 (400)
+++|+|++++++++.|++|+|||+.++. ++. .+. +|. +.|+|+++ +++.+++|++|++
T Consensus 260 ~v~~sp~~~~la~~~d~~v~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 260 QIAFNPKLQWVAVGTDQGVKIFNLMTQS-KAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp EEEECSSSCEEEEEESSCEEEEESSSCC-SCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred EEEECCCCCEEEEECCCCEEEEEeCCCC-CCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 9999999999998889999999998753 222 333 342 45666654 3566677776654
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=231.47 Aligned_cols=298 Identities=9% Similarity=0.041 Sum_probs=184.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++|+|||||++||+|+.|+ ++|||+.... .. +..+. ..+..+++.++++
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~-----------~~--~~~~~------------~~~~~~~~~~~~~-- 71 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA-----------HI--MSQEM------------RHLSKVRMLHRTN-- 71 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSE-EEEEEETTEE-----------EE--EEEEC------------SCCCEEEECTTSS--
T ss_pred CceEEEEECCCCCEEEEEcCCE-EEEEecCCcc-----------ee--eeeec------------CCeEEEEEcCCCC--
Confidence 4688999999999999998775 8899987421 11 11111 1256678877653
Q ss_pred eE-EEeeCCCeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc-cccccccceeccCcccc
Q psy12356 84 HF-LLSTNDQSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA-ALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~-l~ss~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~-~~~~~~~~~~~~~~~~~ 158 (400)
.+ ++++.|++|+|||+.+++. ..+...|.+++|+|+ .++.+ .|+.|++||+.++ +.+..... .
T Consensus 72 ~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~~~~~~~~~~--------~ 139 (355)
T 3vu4_A 72 YVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNPWKRITDDIR--------F 139 (355)
T ss_dssp EEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSS---EEEEE-ETTEEEEEESSTTCCBSSCCEE--------E
T ss_pred EEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCC---EEEEE-EcCEEEEEECCCCceeeEEecc--------C
Confidence 44 4567899999999988863 134568999999985 23333 5889999999887 43322111 0
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
.....+ ++...+.++++.||.|++||++++......-+.............+.+|.+.|.+++|||||++
T Consensus 140 ~~~~~~----------s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~ 209 (355)
T 3vu4_A 140 GGVCEF----------SNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM 209 (355)
T ss_dssp EEEEEE----------ETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE
T ss_pred CceEEE----------EccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE
Confidence 000111 1223334446789999999998754211000000000000001225689999999999999999
Q ss_pred EEEe-cCCe-EEEEeCCCCCCceeeec-C-CC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceeccc-
Q psy12356 239 MISR-DYLC-VKVWDLHMESRPVETYP-T-HT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANA- 305 (400)
Q Consensus 239 las~-~D~t-IklWD~~~~~~~l~~~~-~-h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~- 305 (400)
||++ .|++ |+|||++++ .++.+++ + |. +.|+|+++ +++.++++++|++......-.......+...
T Consensus 210 l~s~s~d~~~v~iwd~~~~-~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~ 288 (355)
T 3vu4_A 210 VATCSQDGTIIRVFKTEDG-VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKY 288 (355)
T ss_dssp EEEEETTCSEEEEEETTTC-CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCC
T ss_pred EEEEeCCCCEEEEEECCCC-cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccc
Confidence 9975 6898 999999986 4788887 5 74 57899875 5788999999988543210000000000000
Q ss_pred --cccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 306 --HTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 306 --~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
+.+.+....+ ..++......++|+|||++|+++ .|+++++|++...+
T Consensus 289 ~~~~~~~~~~~~---------------~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 289 FQSEWSLCNFKL---------------SVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CCCSSCSEEEEC---------------CCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred cccccceeEEEe---------------ccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 0000111111 12233345679999999999997 69999999986533
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-27 Score=222.65 Aligned_cols=257 Identities=12% Similarity=0.110 Sum_probs=186.9
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeee--ccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ--SHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~--~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
..|.+++|+|+|++||+++ ||+|+|||+.+... ...+..+. +|. ..|.+++|+|+++
T Consensus 52 ~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~--------~~~~~~~~~~~~~------------~~v~~~~~~~~~~ 110 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN--------KSPVSQLDCLNRD------------NYIRSCKLLPDGC 110 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC--------CSCSEEEECSCTT------------SBEEEEEECTTSS
T ss_pred CceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc--------eeeeecccccCCC------------CcEEEEEEcCCCC
Confidence 3588999999999999999 99999999986431 11122333 444 4599999999864
Q ss_pred CceEEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.+++++.|++|++||+++++. ..+...|++++|+|++ +++++++.|+.|++||++++........ .
T Consensus 111 --~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~~~~~~----~- 182 (337)
T 1gxr_A 111 --TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQG----H- 182 (337)
T ss_dssp --EEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECC----C-
T ss_pred --EEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCceeeeeec----c-
Confidence 677788999999999988762 3456779999999974 7899999999999999998743221110 0
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
...+..+. ..+++...++++.||.|++||++++.... .+ .|...+.+++|+|+
T Consensus 183 ~~~i~~~~----------~~~~~~~l~~~~~dg~i~~~d~~~~~~~~----~~-------------~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 183 TDGASCID----------ISNDGTKLWTGGLDNTVRSWDLREGRQLQ----QH-------------DFTSQIFSLGYCPT 235 (337)
T ss_dssp SSCEEEEE----------ECTTSSEEEEEETTSEEEEEETTTTEEEE----EE-------------ECSSCEEEEEECTT
T ss_pred cCceEEEE----------ECCCCCEEEEEecCCcEEEEECCCCceEe----ee-------------cCCCceEEEEECCC
Confidence 01122222 23555555666789999999998765321 11 34578999999999
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceeeccCccceecccc
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
|++|+++ .|+.|++||++++. ...+.+|. +.++|+++ +++.++.+++|++...+.. ....|
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~--------~~~~~ 305 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI--------FQSKE 305 (337)
T ss_dssp SSEEEEEETTSCEEEEETTSSC--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE--------EEEEC
T ss_pred CCEEEEEcCCCcEEEEECCCCC--eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE--------EEecC
Confidence 9999864 68999999999763 34566664 56788864 5678899999987644332 12357
Q ss_pred ccceEEEEEcCCCcEEeecc
Q psy12356 307 TYHINSISVNSDQLTVEASP 326 (400)
Q Consensus 307 ~~~i~~i~~s~dg~~~~~~~ 326 (400)
...|.+++|+|||+++++.+
T Consensus 306 ~~~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 306 SSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp SSCEEEEEECTTSCEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEec
Confidence 78899999999999887544
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-28 Score=231.03 Aligned_cols=269 Identities=14% Similarity=0.135 Sum_probs=178.6
Q ss_pred EEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE
Q psy12356 8 ASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL 87 (400)
Q Consensus 8 ~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ 87 (400)
...+.+|+++||+|+.||+|+|||+.+++ .+..+.. ..|.++.|+|. +++
T Consensus 41 ~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~-----------~~~~~~~--------------~~v~~~~~~~~-----~~s 90 (343)
T 3lrv_A 41 NKSMYYDKWVCMCRCEDGALHFTQLKDSK-----------TITTITT--------------PNPRTGGEHPA-----IIS 90 (343)
T ss_dssp CSSSSEEEEEEEEEEETTEEEEEEESSSS-----------CEEEEEE--------------ECCCTTCCCCS-----EEE
T ss_pred hhhhcCCCCEEEEECCCCcEEEEECCCCc-----------EEEEEec--------------CCceeeeeCCc-----eEE
Confidence 34556799999999999999999998643 2333331 23666778764 778
Q ss_pred eeCCCeEEEEEcc---------CCC-cc----cccccEEEEEEec--CCCCEEEEEeCCCeEEEEeccccccccccccee
Q psy12356 88 STNDQSFNIVDIK---------PTN-ME----ELNEVITAAEFHP--IDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCL 151 (400)
Q Consensus 88 ss~D~tI~lWd~~---------~~~-~~----~~~~~V~sv~f~p--~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~ 151 (400)
++.|++|++|+.. +++ ++ .+...|.+++|+| ++ ++|++++.|++|++||++++........
T Consensus 91 ~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~~-- 167 (343)
T 3lrv_A 91 RGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHSA-- 167 (343)
T ss_dssp ECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEECC--
T ss_pred ecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEec--
Confidence 8999999999765 333 22 2336799999999 85 7899999999999999998843211000
Q ss_pred ccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccc-cccCeEEE
Q psy12356 152 IEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE-IISSISDV 230 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v 230 (400)
.....+.. +...|++...++++.||.|++||++++.... .. +.+ |..+|.+|
T Consensus 168 --~~~~~i~~----------~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~---~~------------~~~~h~~~v~~l 220 (343)
T 3lrv_A 168 --KSDVEYSS----------GVLHKDSLLLALYSPDGILDVYNLSSPDQAS---SR------------FPVDEEAKIKEV 220 (343)
T ss_dssp --CSSCCCCE----------EEECTTSCEEEEECTTSCEEEEESSCTTSCC---EE------------CCCCTTSCEEEE
T ss_pred --CCCCceEE----------EEECCCCCEEEEEcCCCEEEEEECCCCCCCc---cE------------EeccCCCCEEEE
Confidence 00001112 2334677777888899999999999765320 11 224 88899999
Q ss_pred EECCCCcEEEEecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccce
Q psy12356 231 KISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHI 310 (400)
Q Consensus 231 ~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i 310 (400)
+|+|+|++|++++|++|+|||++++. +++.+..+. .|...+
T Consensus 221 ~fs~~g~~l~s~~~~~v~iwd~~~~~-~~~~~~~~~--------------------------------------~~~~~~ 261 (343)
T 3lrv_A 221 KFADNGYWMVVECDQTVVCFDLRKDV-GTLAYPTYT--------------------------------------IPEFKT 261 (343)
T ss_dssp EECTTSSEEEEEESSBEEEEETTSST-TCBSSCCCB--------------------------------------C-----
T ss_pred EEeCCCCEEEEEeCCeEEEEEcCCCC-cceeecccc--------------------------------------cccccc
Confidence 99999999998767799999999864 344443221 011111
Q ss_pred --EEEEEcCCCcEEee--c-cc--chhh---c---ccccceeEEEEcc---CCCEEEEe-cCCeEEEEeCccCCeeEEEE
Q psy12356 311 --NSISVNSDQLTVEA--S-PR--GIFA---D---AHTYHISSTSVNS---DQETYLSA-DDLRINLWHLEITDQSFNIV 373 (400)
Q Consensus 311 --~~i~~s~dg~~~~~--~-~~--~~~~---~---gh~~~V~~i~fsp---Dg~~las~-~D~~i~lW~~~~~~~~~~~~ 373 (400)
.+++|+|+|+++++ . .. ++|. . -...++..++|+| +++.|+++ .|++++++-.. ...++++
T Consensus 262 ~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~--~~~~~i~ 339 (343)
T 3lrv_A 262 GTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAILKT--NDSFNIV 339 (343)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEEEC--SSEEEEE
T ss_pred cceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEEEec--CCeEeEE
Confidence 35777888877765 2 11 1221 0 0114566789999 99999886 69999888643 2357888
Q ss_pred eecC
Q psy12356 374 DIKP 377 (400)
Q Consensus 374 ~~~~ 377 (400)
.+-|
T Consensus 340 ~l~p 343 (343)
T 3lrv_A 340 ALTP 343 (343)
T ss_dssp EEEC
T ss_pred EcCC
Confidence 7766
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=234.73 Aligned_cols=257 Identities=16% Similarity=0.223 Sum_probs=183.0
Q ss_pred eeEEEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.|++++|+|+ +++||+++.||+|+|||+....... ...+..+.+..+.+|.. .|.+++|+|++.
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~-~~~~~~~~~~~~~~h~~------------~v~~l~~~~~~~- 194 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKP-EPSGECQPDLRLRGHQK------------EGYGLSWNPNLN- 194 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSC-CTTCCCCCSEEEECCSS------------CCCCEEECTTST-
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCccccc-CccccCCCcEEecCCCC------------CeEEEEeCCCCC-
Confidence 56899999997 7899999999999999987521100 00112344567788874 489999999863
Q ss_pred ceEEEeeCCCeEEEEEccCCC-----------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccccee
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN-----------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCL 151 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~-----------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~ 151 (400)
..+++++.|++|+|||+.++. +..|...|.+++|+|+++.+|++++.|+.|++||++++.... .
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~----~- 269 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK----P- 269 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSS----C-
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCc----c-
Confidence 367778899999999998732 124667899999999767899999999999999998761000 0
Q ss_pred ccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEE
Q psy12356 152 IEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVK 231 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 231 (400)
... +..|...|++++
T Consensus 270 -----------------------------------------------------~~~------------~~~~~~~v~~i~ 284 (430)
T 2xyi_A 270 -----------------------------------------------------SHT------------VDAHTAEVNCLS 284 (430)
T ss_dssp -----------------------------------------------------SEE------------EECCSSCEEEEE
T ss_pred -----------------------------------------------------eeE------------eecCCCCeEEEE
Confidence 000 124667899999
Q ss_pred ECCCCc-EEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCc--ccCCCCCceeecCcccccceeeccCccc
Q psy12356 232 ISNSGR-YMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQ--LRDPSNITALRVPQIKPIELTVEASPRR 300 (400)
Q Consensus 232 fSpdg~-~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~--~~~~~~~~~i~l~~~~~~~~~~~~~~~~ 300 (400)
|+|+++ +|++ +.|++|+|||+++...++..+.+|. +.|+++ +++++.+++|++|++.........
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---- 360 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST---- 360 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH----
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc----
Confidence 999997 5665 4689999999998667888898885 467775 345677888888887532110000
Q ss_pred eeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCC-EEEEe-cCCeEEEEeCcc
Q psy12356 301 IFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQE-TYLSA-DDLRINLWHLEI 365 (400)
Q Consensus 301 ~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~-~las~-~D~~i~lW~~~~ 365 (400)
....+.. .+.+ ....+|...|.+++|+|+++ +|+++ .|++|+||++..
T Consensus 361 --~~~~~~~---------~~~~------~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 361 --EDAEDGP---------PELL------FIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp --HHHHHCC---------TTEE------EECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred --cccccCC---------cceE------EEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 0000000 0000 01147999999999999999 78886 799999999874
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-27 Score=232.90 Aligned_cols=269 Identities=12% Similarity=0.182 Sum_probs=183.4
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|.+++| ||++||+|+.||+|+|||+.++ +....+.+|.. .|.+++| ++ ..+
T Consensus 136 v~~~~~--d~~~l~~g~~dg~i~iwd~~~~-----------~~~~~~~~h~~------------~v~~l~~--~~--~~l 186 (435)
T 1p22_A 136 VYCLQY--DDQKIVSGLRDNTIKIWDKNTL-----------ECKRILTGHTG------------SVLCLQY--DE--RVI 186 (435)
T ss_dssp EEEEEC--CSSEEEEEESSSCEEEEESSSC-----------CEEEEECCCSS------------CEEEEEC--CS--SEE
T ss_pred EEEEEE--CCCEEEEEeCCCeEEEEeCCCC-----------eEEEEEcCCCC------------cEEEEEE--CC--CEE
Confidence 666665 8999999999999999998753 24567888874 4888988 33 377
Q ss_pred EEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 86 LLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
++++.|++|++||+.+++. ..|...|.+++|++ +.+++++.|++|++||++++...... ...... ...+..
T Consensus 187 ~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~-~~~~~~-~~~v~~ 261 (435)
T 1p22_A 187 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLR-RVLVGH-RAAVNV 261 (435)
T ss_dssp EEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEE-EEECCC-SSCEEE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceee-eEecCC-CCcEEE
Confidence 7889999999999998873 45678899999975 48999999999999999887432100 000000 001111
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las 241 (400)
+. .++...++++.||+|++||++++... .. +.+|...|.+++| +++++++
T Consensus 262 ~~------------~~~~~l~s~~~dg~i~vwd~~~~~~~----~~------------~~~~~~~v~~~~~--~~~~l~~ 311 (435)
T 1p22_A 262 VD------------FDDKYIVSASGDRTIKVWNTSTCEFV----RT------------LNGHKRGIACLQY--RDRLVVS 311 (435)
T ss_dssp EE------------EETTEEEEEETTSEEEEEETTTCCEE----EE------------EECCSSCEEEEEE--ETTEEEE
T ss_pred EE------------eCCCEEEEEeCCCeEEEEECCcCcEE----EE------------EcCCCCcEEEEEe--CCCEEEE
Confidence 11 12334555667999999999876432 11 3467788999999 4678776
Q ss_pred -ecCCeEEEEeCCCCCCceeeecCCCcC-----CCCcc-cCCCCCceeecCcccccceeeccCccceeccccccceEEEE
Q psy12356 242 -RDYLCVKVWDLHMESRPVETYPTHTKE-----ENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSIS 314 (400)
Q Consensus 242 -~~D~tIklWD~~~~~~~l~~~~~h~~~-----~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 314 (400)
+.|++|++||++++ .++..+.+|... .++.+ ++++.+++|++|++..... .. . . ...+..
T Consensus 312 g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~-----~~-~--~--~~~~~~-- 378 (435)
T 1p22_A 312 GSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALD-----PR-A--P--AGTLCL-- 378 (435)
T ss_dssp EETTSCEEEEETTTC-CEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTS-----TT-S--C--TTTTEE--
T ss_pred EeCCCeEEEEECCCC-CEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCC-----cc-c--c--ccchhe--
Confidence 57999999999986 478889888521 25554 3467778888887632210 00 0 0 000000
Q ss_pred EcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 315 VNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 315 ~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
.. ..+|...|.+++| |+++|+++ .|++|++||+....
T Consensus 379 -------------~~-~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 379 -------------RT-LVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp -------------EE-ECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred -------------ee-ccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 00 1479999999999 88999997 69999999997643
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-27 Score=239.32 Aligned_cols=246 Identities=9% Similarity=0.080 Sum_probs=171.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+|+|||||++||+++.||+|+|||.+. ++..+. |.... .+..|.+++||||++
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-------------~l~~l~-~~~~~-------~~~sv~svafSPDG~-- 142 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-------------MLTNLD-SKGNL-------SSRTYHCFEWNPIES-- 142 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTE-------------EEEECC-CSSCS-------TTTCEEEEEECSSSS--
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-------------eeeecc-CCCcc-------ccccEEEEEEcCCCC--
Confidence 3589999999999999999999999999641 345566 54210 013488999999985
Q ss_pred eEEEeeCCCeEEEEEccCCCc---------------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM---------------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHS 148 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~---------------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~ 148 (400)
.+++++.||+|+|||+.++.+ .+|...|.+++|+|++ +|+++.|++|++||+.++..... .
T Consensus 143 ~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~-~ 218 (588)
T 2j04_A 143 SIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPV-S 218 (588)
T ss_dssp CEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCC-E
T ss_pred EEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccc-e
Confidence 677789999999999988753 3345689999999974 78899999999999988742100 0
Q ss_pred ceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeE
Q psy12356 149 KCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
..+.......++.+.+ + +...++++ +++|++||+..+... .+ ..+|.+.|.
T Consensus 219 ~tL~~~h~~~V~svaF----------s--g~~LASa~-~~tIkLWd~~~~~~~-----~~-----------~~gh~~~V~ 269 (588)
T 2j04_A 219 RMIQNASRRKITDLKI----------V--DYKVVLTC-PGYVHKIDLKNYSIS-----SL-----------KTGSLENFH 269 (588)
T ss_dssp EEEECCCSSCCCCEEE----------E--TTEEEEEC-SSEEEEEETTTTEEE-----EE-----------ECSCCSCCC
T ss_pred eeecccccCcEEEEEE----------E--CCEEEEEe-CCeEEEEECCCCeEE-----EE-----------EcCCCceEE
Confidence 0010000011222222 2 12333443 699999999875431 11 126889999
Q ss_pred EEEE--CCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccc
Q psy12356 229 DVKI--SNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANA 305 (400)
Q Consensus 229 ~v~f--Spdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~ 305 (400)
+++| |||+..|+++ .||+ |||.... ++ +.+++.+.+ +.++++++|+....+ ... . .
T Consensus 270 ~va~~~s~d~~~La~a~edG~-klw~~d~----~~------~spd~~l~a-~~d~~v~lW~~~g~~-------l~~-~-~ 328 (588)
T 2j04_A 270 IIPLNHEKESTILLMSNKTSY-KVLLEDE----LH------VTADNIIAP-YLEKKFKKWSTIWNE-------FNN-Y-E 328 (588)
T ss_dssp EEEETTCSSCEEEEECSSCEE-EEEESSS----EE------EECCCSSHH-HHHHHHHHTTTTTTS-------SSS-S-C
T ss_pred EEEeeeCCCCCEEEEEcCCCC-EEEeecc----EE------ECCCceEEE-EcCCEEEEEECCCCc-------eee-e-c
Confidence 9999 9999999876 5899 9999871 32 355666543 237889999864332 111 1 2
Q ss_pred cccceEEEEEcCCCcEEeecc
Q psy12356 306 HTYHINSISVNSDQLTVEASP 326 (400)
Q Consensus 306 ~~~~i~~i~~s~dg~~~~~~~ 326 (400)
+...|.+++|||||+.+|.+.
T Consensus 329 ~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 329 TTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp CEEEEEEEEECTTSSEEEEEE
T ss_pred cceEEEEEEECCCCCEEEEEE
Confidence 367799999999999988654
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-26 Score=216.26 Aligned_cols=226 Identities=17% Similarity=0.195 Sum_probs=163.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|||++||+|+.||+|+|||+.++ +.+..+.+|.. .|.+++|+|+++
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~-----------~~~~~~~~~~~------------~v~~~~~~~~~~-- 120 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSG-----------KCLKTLKGHSN------------YVFCCNFNPQSN-- 120 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----------CEEEEEECCSS------------CEEEEEECSSSS--
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCC-----------cEEEEEcCCCC------------CEEEEEEcCCCC--
Confidence 45899999999999999999999999999753 24567888873 489999999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|++|++||+++++. ..|...|.+++|+|++ ++|++++.|++|++||++++...... .......+
T Consensus 121 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~~~~ 195 (312)
T 4ery_A 121 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTL----IDDDNPPV 195 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEE----CCSSCCCE
T ss_pred EEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCceeeEE----eccCCCce
Confidence 777889999999999988762 4566789999999975 78999999999999999987432210 00000111
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccC---eEEEEECCCC
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISS---ISDVKISNSG 236 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~---V~~v~fSpdg 236 (400)
..+ ...+++...++++.||.|++||++.+... +.+. +|... +......+++
T Consensus 196 ~~~----------~~~~~~~~l~~~~~d~~i~iwd~~~~~~~----~~~~------------~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 196 SFV----------KFSPNGKYILAATLDNTLKLWDYSKGKCL----KTYT------------GHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp EEE----------EECTTSSEEEEEETTTEEEEEETTTTEEE----EEEC------------SSCCSSSCCCEEEECSSS
T ss_pred EEE----------EECCCCCEEEEEcCCCeEEEEECCCCcEE----EEEE------------ecCCceEEEEEEEEeCCC
Confidence 112 22356655666778999999999876532 2222 22222 3233344688
Q ss_pred cEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCcccC-C--CCCceeecCc
Q psy12356 237 RYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLRD-P--SNITALRVPQ 286 (400)
Q Consensus 237 ~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~~-~--~~~~~i~l~~ 286 (400)
++|+++ .|++|++||++++ .+++.+.+|. ++|++.+++ + +.++++++|.
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTK-EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp CEEEECCTTSCEEEEETTTC-CEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred cEEEEECCCCEEEEEECCCc-hhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence 888875 6899999999986 4688899885 356666542 2 3567777765
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=221.12 Aligned_cols=209 Identities=11% Similarity=0.073 Sum_probs=133.1
Q ss_pred eeEEEEEECCC----CCeEEEecC--------------------CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcch
Q psy12356 4 YMREASQRFSD----GELLATGDK--------------------GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEF 59 (400)
Q Consensus 4 ~~v~~v~fspd----G~~Las~s~--------------------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~ 59 (400)
..|++|+|||| ++++|+++. |++|++|++.+. .+.+.++.+|.+
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d----------G~~~~s~~~~~~-- 179 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAED----------GGGKENQFLMPP-- 179 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTT----------SCEEEEEEECCC--
T ss_pred cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCC----------CceeeeeccCCC--
Confidence 47899999999 999988663 666666666431 123445556664
Q ss_pred hhcccccccceeeEEEEEe-ccCCceEEEeeCCCeEEEEEccCCCc-c---cc---cccEEEEEEecCCCCEEEEEeCCC
Q psy12356 60 DYLKSLEIEEKINKIRWLR-RKNQAHFLLSTNDQSFNIVDIKPTNM-E---EL---NEVITAAEFHPIDCNLFVYSSSKG 131 (400)
Q Consensus 60 ~~~~~~~~~~~V~~v~~sp-~~~~~~~l~ss~D~tI~lWd~~~~~~-~---~~---~~~V~sv~f~p~~~~~las~s~Dg 131 (400)
.+..++|+| ++.+..+++++.|++|||||+++|++ + .+ ...+.+++|+|++ .++++++.+.
T Consensus 180 ----------~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG-~~lvs~s~~~ 248 (356)
T 2w18_A 180 ----------EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMG-LLFIVLSHPC 248 (356)
T ss_dssp ----------SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETT-EEEEEEC---
T ss_pred ----------ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCC-CEEEEeccCC
Confidence 377889998 55444677789999999999999873 2 22 2357788999975 7777776554
Q ss_pred eEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCC
Q psy12356 132 TIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEP 211 (400)
Q Consensus 132 ~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~ 211 (400)
. +|++.++ +.|++|++||..++..... ..+..|
T Consensus 249 ~--~w~laSG-------------------------------------------s~D~tIklWd~~tgk~l~v--~~~~~p 281 (356)
T 2w18_A 249 A--KESESLR-------------------------------------------SPVFQLIVINPKTTLSVGV--MLYCLP 281 (356)
T ss_dssp ------------------------------------------------------CCEEEEEEETTTTEEEEE--EEECCC
T ss_pred C--cceeecc-------------------------------------------CCCcEEEEEECCCCEEEEE--EEeecc
Confidence 3 3665554 3477888888776643210 000001
Q ss_pred CCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCccccc
Q psy12356 212 EDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPI 290 (400)
Q Consensus 212 ~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~ 290 (400)
.+|...+.+..++ +.++|++ .|++|||||+.++ +++++|++|
T Consensus 282 ---------~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tG-k~l~tL~gH------------------------- 324 (356)
T 2w18_A 282 ---------PGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLG-QCTALLPPV------------------------- 324 (356)
T ss_dssp ---------TTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTC-SEEEEECCC-------------------------
T ss_pred ---------CCCcceeEccccC--CCEEEEEcCCCcEEEEECCCC-cEEEEecCC-------------------------
Confidence 2455555444444 7888875 6999999999986 466666544
Q ss_pred ceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccc-eeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 291 ELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYH-ISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~-V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
... +.+++|||||++|||+ .|++|||||+
T Consensus 325 --------------------------------------------~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 325 --------------------------------------------SDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ----------------------------------------------CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred --------------------------------------------CCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 222 2358999999999997 6999999985
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.4e-27 Score=244.84 Aligned_cols=203 Identities=15% Similarity=0.177 Sum_probs=154.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+|+|+|||++||||+.||+|+|||+.++ +..+.+.+|.. .|.+++|+|++.
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~-----------~~~~~~~~h~~------------~v~~~~~s~~~~-- 485 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAG-----------VSTRRFVGHTK------------DVLSVAFSLDNR-- 485 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTT-----------EEEEEEECCSS------------CEEEEEECTTSS--
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCC-----------cceeEEeCCCC------------CEEEEEEeCCCC--
Confidence 35899999999999999999999999999753 34567888874 499999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCC-CEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDC-NLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~-~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.+++++.|++|+|||+.... ...|...|++++|+|++. .++++++.|++|++||++++.+...... +.
T Consensus 486 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~----h~ 561 (694)
T 3dm0_A 486 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG----HT 561 (694)
T ss_dssp CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC----CS
T ss_pred EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC----CC
Confidence 78889999999999986543 134667899999999752 5799999999999999998744221111 00
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
..+..+. .++++...++++.||+|++||++++.... .+ .+...|.+++|||+
T Consensus 562 -~~v~~v~----------~spdg~~l~sg~~Dg~i~iwd~~~~~~~~----~~-------------~~~~~v~~~~~sp~ 613 (694)
T 3dm0_A 562 -GYVSTVA----------VSPDGSLCASGGKDGVVLLWDLAEGKKLY----SL-------------EANSVIHALCFSPN 613 (694)
T ss_dssp -SCEEEEE----------ECTTSSEEEEEETTSBCEEEETTTTEEEE----CC-------------BCSSCEEEEEECSS
T ss_pred -CCEEEEE----------EeCCCCEEEEEeCCCeEEEEECCCCceEE----Ee-------------cCCCcEEEEEEcCC
Confidence 1122222 34666667777889999999998765321 11 22357999999999
Q ss_pred CcEEEEecCCeEEEEeCCCCCCceeeecC
Q psy12356 236 GRYMISRDYLCVKVWDLHMESRPVETYPT 264 (400)
Q Consensus 236 g~~las~~D~tIklWD~~~~~~~l~~~~~ 264 (400)
+.+|+++.|+.|+|||++++ .+++.+..
T Consensus 614 ~~~l~~~~~~~i~iwd~~~~-~~~~~~~~ 641 (694)
T 3dm0_A 614 RYWLCAATEHGIKIWDLESK-SIVEDLKV 641 (694)
T ss_dssp SSEEEEEETTEEEEEETTTT-EEEEEECC
T ss_pred CcEEEEEcCCCEEEEECCCC-CChhhhcc
Confidence 99999888889999999986 34555543
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=224.17 Aligned_cols=196 Identities=12% Similarity=0.132 Sum_probs=138.8
Q ss_pred EEEEEECCCCCeEE--EecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 6 REASQRFSDGELLA--TGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 6 v~~v~fspdG~~La--s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.+|+|||||++|| +++.|++|+|||+.+. +.+..+. |. ..|.+|+|+|++
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~-----------~~~~~~~-~~------------~~V~~v~fspdg--- 188 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDL-----------TEKFEIE-TR------------GEVKDLHFSTDG--- 188 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTT-----------EEEEEEE-CS------------SCCCEEEECTTS---
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCC-----------cEEEEeC-CC------------CceEEEEEccCC---
Confidence 67899999999976 4557999999999853 2344454 43 348999999987
Q ss_pred eEEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEeCCC----eEEEEecccccccccccceecc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSSSKG----TIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s~Dg----~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
++++++.|+.+++|+..++.. ..+...|++++|+|++ +++++++.|+ ++++||+............+..
T Consensus 189 ~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~ 267 (365)
T 4h5i_A 189 KVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADD-TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN 267 (365)
T ss_dssp SEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETT-EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES
T ss_pred ceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCC-CEEEEEecCCcceeEEeecccccceecceeeeeecC
Confidence 455544456677777766652 2356679999999985 7889998887 6899998766321000000100
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
. ...+..+ .++|++..+++++.|++|+|||+++++.. + .++.+|...|++|+||
T Consensus 268 ~-~~~V~~~----------~~Spdg~~lasgs~D~~V~iwd~~~~~~~----~-----------~~~~gH~~~V~~v~fS 321 (365)
T 4h5i_A 268 R-FKGITSM----------DVDMKGELAVLASNDNSIALVKLKDLSMS----K-----------IFKQAHSFAITEVTIS 321 (365)
T ss_dssp S-CSCEEEE----------EECTTSCEEEEEETTSCEEEEETTTTEEE----E-----------EETTSSSSCEEEEEEC
T ss_pred C-CCCeEeE----------EECCCCCceEEEcCCCEEEEEECCCCcEE----E-----------EecCcccCCEEEEEEC
Confidence 0 0112222 33578877888889999999999986542 1 1134789999999999
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCC
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~ 255 (400)
|||++|||+ .|+||||||+...
T Consensus 322 pdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 322 PDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999975 6999999999754
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-25 Score=212.28 Aligned_cols=235 Identities=16% Similarity=0.177 Sum_probs=160.1
Q ss_pred ceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC---------cccccccEEEEEE
Q psy12356 46 YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN---------MEELNEVITAAEF 116 (400)
Q Consensus 46 ~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~---------~~~~~~~V~sv~f 116 (400)
+.+..+|+||+. .|++|+|+|+.. ..++++|.|++|+|||+.+++ ++.|...|++++|
T Consensus 28 ~~l~~tL~GH~~------------~V~~v~~sp~~~-~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~ 94 (340)
T 4aow_A 28 MTLRGTLKGHNG------------WVTQIATTPQFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 94 (340)
T ss_dssp EEEEEEECCCSS------------CEEEEEECTTCT-TEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEE
T ss_pred eEEEEEECCccC------------CEEEEEEeCCCC-CEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEE
Confidence 455678999984 599999999742 366778999999999997654 2356788999999
Q ss_pred ecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecc
Q psy12356 117 HPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMR 196 (400)
Q Consensus 117 ~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~ 196 (400)
+|++ ++|++++.|+.|++|+........... .. ....... ...+.....++++.|+.+++||++
T Consensus 95 s~dg-~~l~s~~~d~~i~~~~~~~~~~~~~~~----~~-~~~~~~~----------~~~~~~~~l~s~s~d~~~~~~d~~ 158 (340)
T 4aow_A 95 SSDG-QFALSGSWDGTLRLWDLTTGTTTRRFV----GH-TKDVLSV----------AFSSDNRQIVSGSRDKTIKLWNTL 158 (340)
T ss_dssp CTTS-SEEEEEETTSEEEEEETTTTEEEEEEE----CC-SSCEEEE----------EECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCC-CEEEEEcccccceEEeecccceeeeec----CC-CCceeEE----------EEeecCccceeecCCCeEEEEEeC
Confidence 9985 799999999999999998874321100 00 0000011 112334445566789999999987
Q ss_pred cccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc--EEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcc
Q psy12356 197 AAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR--YMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQL 273 (400)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~--~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~ 273 (400)
...... . ...+|...+..++|++++. ++++ +.|++|++||++++ .++..+.+|.
T Consensus 159 ~~~~~~-----~----------~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~-~~~~~~~~h~------- 215 (340)
T 4aow_A 159 GVCKYT-----V----------QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC-KLKTNHIGHT------- 215 (340)
T ss_dssp SCEEEE-----E----------CSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT-EEEEEECCCS-------
T ss_pred CCceEE-----E----------EeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC-ceeeEecCCC-------
Confidence 543210 0 1236778999999998754 5665 57999999999975 3556665553
Q ss_pred cCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeeccc----chh---------hcccccceeE
Q psy12356 274 RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR----GIF---------ADAHTYHISS 340 (400)
Q Consensus 274 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~----~~~---------~~gh~~~V~~ 340 (400)
..|++++|+|||+++++.+. ++| ...+...|.+
T Consensus 216 ----------------------------------~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~ 261 (340)
T 4aow_A 216 ----------------------------------GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINA 261 (340)
T ss_dssp ----------------------------------SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEE
T ss_pred ----------------------------------CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEe
Confidence 33444555555554443221 000 1134567999
Q ss_pred EEEccCCCEEEEecCCeEEEEeCccC
Q psy12356 341 TSVNSDQETYLSADDLRINLWHLEIT 366 (400)
Q Consensus 341 i~fspDg~~las~~D~~i~lW~~~~~ 366 (400)
++|+|++.+++++.|++|++||++..
T Consensus 262 ~~~~~~~~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 262 LCFSPNRYWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTT
T ss_pred eecCCCCceeeccCCCEEEEEECCCC
Confidence 99999999887788999999999853
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-26 Score=227.21 Aligned_cols=203 Identities=16% Similarity=0.218 Sum_probs=147.0
Q ss_pred ccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 67 IEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 67 ~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
++.+|++|+|+|..+ ..+++++.||+|+|||+.+++ +.+|...|++++|+|.++++|+|+|.|++|++||+++
T Consensus 118 ~~~~V~~l~~~P~~~-~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 118 FDRRATSLAWHPTHP-STVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp CSSCEEEEEECSSCT-TCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred CCCCEEEEEEeCCCC-CEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 346799999999642 367788999999999998765 2357789999999997678999999999999999987
Q ss_pred ccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccc
Q psy12356 141 AALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFF 220 (400)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
+.... +........+. ..+...+++..+++++.||.|++||++.... .. +
T Consensus 197 ~~~~~-----~~~~~~~~~~~--------~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~-----~~------------~ 246 (435)
T 4e54_B 197 NILRV-----FASSDTINIWF--------CSLDVSASSRMVVTGDNVGNVILLNMDGKEL-----WN------------L 246 (435)
T ss_dssp CEEEE-----EECCSSCSCCC--------CCEEEETTTTEEEEECSSSBEEEEESSSCBC-----CC------------S
T ss_pred CceeE-----EeccCCCCccE--------EEEEECCCCCEEEEEeCCCcEeeeccCccee-----EE------------E
Confidence 63211 00000000000 0112235666677788999999999874321 11 3
Q ss_pred cccccCeEEEEECCCCc-EEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCc
Q psy12356 221 SEIISSISDVKISNSGR-YMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASP 298 (400)
Q Consensus 221 ~~h~~~V~~v~fSpdg~-~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~ 298 (400)
.+|...|.+|+|+|+++ ++++ +.|++|+|||+++... ...+
T Consensus 247 ~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~-~~~~------------------------------------ 289 (435)
T 4e54_B 247 RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG-KASF------------------------------------ 289 (435)
T ss_dssp BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS-SSCC------------------------------------
T ss_pred ecccceEEeeeecCCCceEEEEecCcceeeEEecccccc-cceE------------------------------------
Confidence 47889999999999987 5665 4699999999986431 1110
Q ss_pred cceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 299 RRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 299 ~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
.. ..+|...|++|+|||||++|+++ .|++|+|||+...+
T Consensus 290 ----~~--------------------------~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 290 ----LY--------------------------SLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp ----SB--------------------------CCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred ----EE--------------------------eeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 00 03688889999999999999997 69999999998654
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=222.41 Aligned_cols=260 Identities=13% Similarity=0.105 Sum_probs=186.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|++++|+|||++||+|+.||.|+|||... +.+..+.+|. ..|.+++|+|+++ .
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~------------~~~~~~~~~~------------~~v~~~~~~~~~~--~ 163 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTG------------ALLNVLNFHR------------APIVSVKWNKDGT--H 163 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTS------------CEEEEECCCC------------SCEEEEEECTTSS--E
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCC------------CeeeeccCCC------------ccEEEEEECCCCC--E
Confidence 799999999999999999999999999432 2355677776 3499999999874 6
Q ss_pred EEEeeCCCeEEEEEccCCCc----cccccc---------------EEEEEEecCCCCEEEEEeCCCeEEEEecccccccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM----EELNEV---------------ITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD 145 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~----~~~~~~---------------V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~ 145 (400)
+++++.|++|++||+.+++. ..+... +.+++|+|+ ..+++++.|+.|++||++++....
T Consensus 164 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~i~~~d~~~~~~~~ 241 (425)
T 1r5m_A 164 IISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD--DKFVIPGPKGAIFVYQITEKTPTG 241 (425)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET--TEEEEECGGGCEEEEETTCSSCSE
T ss_pred EEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC--CEEEEEcCCCeEEEEEcCCCceee
Confidence 77889999999999988762 222222 888999996 468999999999999999874322
Q ss_pred cccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc
Q psy12356 146 RHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS 225 (400)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 225 (400)
... .. ...+..+. ..+++...++++.||.|++||++.+... .. +.+|..
T Consensus 242 ~~~----~~-~~~i~~~~----------~~~~~~~l~~~~~d~~i~i~d~~~~~~~----~~------------~~~~~~ 290 (425)
T 1r5m_A 242 KLI----GH-HGPISVLE----------FNDTNKLLLSASDDGTLRIWHGGNGNSQ----NC------------FYGHSQ 290 (425)
T ss_dssp EEC----CC-SSCEEEEE----------EETTTTEEEEEETTSCEEEECSSSBSCS----EE------------ECCCSS
T ss_pred eec----cC-CCceEEEE----------ECCCCCEEEEEcCCCEEEEEECCCCccc----eE------------ecCCCc
Confidence 110 00 01112222 2355555666678999999999875421 11 235778
Q ss_pred CeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccceee--
Q psy12356 226 SISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIELTV-- 294 (400)
Q Consensus 226 ~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~~~-- 294 (400)
.|.+++|+|++ ++++ +.|++|++||++++ .++..+.+|. +.++|+++ +++.++.+++|++...+...
T Consensus 291 ~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~ 368 (425)
T 1r5m_A 291 SIVSASWVGDD-KVISCSMDGSVRLWSLKQN-TLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRS 368 (425)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEETTTT-EEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----
T ss_pred cEEEEEECCCC-EEEEEeCCCcEEEEECCCC-cEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceee
Confidence 99999999999 6665 67999999999986 4677777774 46788865 46778999999886443000
Q ss_pred ------------ccCccceecccccc--ceEEEEEcCCCcEEeecc
Q psy12356 295 ------------EASPRRIFANAHTY--HINSISVNSDQLTVEASP 326 (400)
Q Consensus 295 ------------~~~~~~~~~~~~~~--~i~~i~~s~dg~~~~~~~ 326 (400)
....... ..+|.. .|.+++|+|||++|++..
T Consensus 369 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 369 LYGNRDGILNPLPIPLYAS-YQSSQDNDYIFDLSWNCAGNKISVAY 413 (425)
T ss_dssp ----------CEECCEEEE-ECCTTCCCCEEEEEECTTSSEEEEEE
T ss_pred eecccccccCcccchhhhh-hcCcccCCceEEEEccCCCceEEEEe
Confidence 0001122 245755 899999999999886543
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.2e-26 Score=213.49 Aligned_cols=207 Identities=13% Similarity=0.159 Sum_probs=146.1
Q ss_pred eeEEEEEECCC--CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSD--GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspd--G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
+.|++|+|+|+ |++||||+.||+|+|||+.++. ...+..+.+|.. .|.+++|+|+..
T Consensus 54 ~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~---------~~~~~~~~~h~~------------~v~~v~~~p~~~ 112 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR---------WSQIAVHAVHSA------------SVNSVQWAPHEY 112 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC---------BCCCEEECCCSS------------CEEEEEECCGGG
T ss_pred CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc---------eEEEEEeecCCC------------ceeEEEeCcCCC
Confidence 46899999874 9999999999999999997532 223445677763 499999999732
Q ss_pred CceEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCC------------CCEEEEEeCCCeEEEEecccccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPID------------CNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~------------~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
+..+++++.|++|+|||++++. +..|...|++++|+|+. +++||+++.|++|++||++++..
T Consensus 113 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~ 192 (297)
T 2pm7_B 113 GPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 192 (297)
T ss_dssp CSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTT
T ss_pred CcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCc
Confidence 3367788999999999998653 23567789999999963 36899999999999999987631
Q ss_pred cccccceeccCcc--cceeceeccCchhhhhhcccC---cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcc
Q psy12356 144 CDRHSKCLIEGTN--CNCQGLIVPESKREERQSSQN---RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKS 218 (400)
Q Consensus 144 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 218 (400)
.. .....+.. ..+..+.+ +|+ +...++++.|++|+|||++....... ...+.
T Consensus 193 ~~---~~~~~l~~H~~~V~~v~~----------sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~-~~~~~--------- 249 (297)
T 2pm7_B 193 TY---VLESTLEGHSDWVRDVAW----------SPTVLLRSYMASVSQDRTCIIWTQDNEQGPWK-KTLLK--------- 249 (297)
T ss_dssp EE---EEEEEECCCSSCEEEEEE----------CCCCSSSEEEEEEETTSCEEEEEESSTTSCCE-EEESS---------
T ss_pred eE---EEEEEecCCCCceEEEEE----------CCCCCCceEEEEEECCCcEEEEEeCCCCCccc-eeeee---------
Confidence 00 01111111 11222333 344 24566777899999999976321000 00110
Q ss_pred cccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCC
Q psy12356 219 FFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHME 255 (400)
Q Consensus 219 ~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~ 255 (400)
..+|...|.+++|+|+|++||+ +.|++|+||+....
T Consensus 250 -~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 250 -EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp -SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred -cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 1256678999999999999997 57999999998743
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-26 Score=222.17 Aligned_cols=215 Identities=9% Similarity=0.081 Sum_probs=153.6
Q ss_pred eeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..|++++|+| ++++||+|+.||+|+|||+.++.... ...+.+..+.+|. ..|.+++|+|++.
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~----~~~~~~~~~~~h~------------~~v~~~~~~p~~~- 144 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL----PLREPVITLEGHT------------KRVGIVAWHPTAQ- 144 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS----CBCSCSEEEECCS------------SCEEEEEECSSBT-
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc----ccCCceEEecCCC------------CeEEEEEECcCCC-
Confidence 4689999999 99999999999999999998653110 0012355777887 4599999999862
Q ss_pred ceEEEeeCCCeEEEEEccCCC----c--ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN----M--EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~----~--~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
..+++++.|++|+|||+.+++ + ..|...|.+++|+|++ ++|++++.|++|++||++++....... .....
T Consensus 145 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~ 220 (402)
T 2aq5_A 145 NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDG-ALICTSCRDKRVRVIEPRKGTVVAEKD---RPHEG 220 (402)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEEEEEE---CSSCS
T ss_pred CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCC-CEEEEEecCCcEEEEeCCCCceeeeec---cCCCC
Confidence 367778999999999998876 2 3467789999999975 789999999999999999885432110 01101
Q ss_pred cceeceeccCchhhhhhcccCcceeecC---CCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDN---RRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
.....+ ...+++...+++ +.|+.|++||++..... ..... ..|...|.+++|+
T Consensus 221 ~~~~~~----------~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~---~~~~~-----------~~~~~~v~~~~~s 276 (402)
T 2aq5_A 221 TRPVHA----------VFVSEGKILTTGFSRMSERQVALWDTKHLEEP---LSLQE-----------LDTSSGVLLPFFD 276 (402)
T ss_dssp SSCCEE----------EECSTTEEEEEEECTTCCEEEEEEETTBCSSC---SEEEE-----------CCCCSSCEEEEEE
T ss_pred CcceEE----------EEcCCCcEEEEeccCCCCceEEEEcCccccCC---ceEEe-----------ccCCCceeEEEEc
Confidence 001111 223555555555 68999999999875431 11110 1345679999999
Q ss_pred CCCcEEE-Ee-cCCeEEEEeCCCCCCceeeec
Q psy12356 234 NSGRYMI-SR-DYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 234 pdg~~la-s~-~D~tIklWD~~~~~~~l~~~~ 263 (400)
|+|++|+ ++ .|++|++||+.++..++..+.
T Consensus 277 ~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 277 PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp TTTTEEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred CCCCEEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 9999986 45 599999999998653355543
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-25 Score=219.19 Aligned_cols=231 Identities=11% Similarity=0.135 Sum_probs=169.2
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|++|+|+|||++||+|+.||+|+|||+.++ +.++.+.+|.. .|.+++|++ . .
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~-----------~~~~~~~~h~~------------~v~~~s~~~--~--~ 201 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ-----------KRLRNMTSHSA------------RVGSLSWNS--Y--I 201 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTT-----------EEEEEECCCSS------------CEEEEEEET--T--E
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEcCCC-----------cEEEEEeCCCC------------ceEEEeeCC--C--E
Confidence 5999999999999999999999999999853 35678888874 477777753 2 5
Q ss_pred EEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 85 FLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
+++++.|+++++||..... +..|...+..+.|+|++ +++++++.|+.+++||++.+............. ...+
T Consensus 202 l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~-~~~V 279 (420)
T 4gga_A 202 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH-QGAV 279 (420)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCC-SSCE
T ss_pred EEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeeccc-CCce
Confidence 6678999999999987654 24567789999999985 789999999999999998874211000000000 0111
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+.+.+ ......++++++.|++|++||++++.... .+ .+...+.++.|+|+++.+
T Consensus 280 ~~~~~~p-------~~~~~la~~~gs~D~~I~iwd~~t~~~~~----~~-------------~~~~~v~~~~~~~~~~~l 335 (420)
T 4gga_A 280 KAVAWCP-------WQSNVLATGGGTSDRHIRIWNVCSGACLS----AV-------------DAHSQVCSILWSPHYKEL 335 (420)
T ss_dssp EEEEECT-------TCTTEEEEEECTTTCEEEEEETTTTEEEE----EE-------------ECSSCEEEEEEETTTTEE
T ss_pred eeeeeCC-------CcccEEEEEeecCCCEEEEEeCCccccce----ee-------------ccccceeeeeecCCCCeE
Confidence 1111110 01123456677899999999999876431 11 122578899999999988
Q ss_pred EE-e--cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccc
Q psy12356 240 IS-R--DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKP 289 (400)
Q Consensus 240 as-~--~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~ 289 (400)
++ + .|++|+|||+.++ .++.++.+|. ++|+|.++ +++.|++|++|++..
T Consensus 336 v~~sg~~d~~I~iwd~~~~-~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYPTM-AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEECTTTCCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEecCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 74 3 4899999999986 5789999996 57899865 578999999998754
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.9e-25 Score=219.19 Aligned_cols=309 Identities=11% Similarity=0.099 Sum_probs=189.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcc-----h-------hh----------
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPE-----F-------DY---------- 61 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-----~-------~~---------- 61 (400)
.-+.+++|+|||++|++++ ++.|++||+.+++. .+.+..+..+... . ..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~~~i~v~d~~~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-KNCILSFKYQSPNH--------WEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKK 75 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-TTEEEEEEEETTTE--------EEEEEEEECCC---------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-CCeEEEEECCCCCc--------ceeeeecCCccccccccccccchhhccccccccccccc
Confidence 4578999999999877764 78999999876540 1122333322210 0 00
Q ss_pred --------------------cccccccceeeEEEEEeccCCceE-EEeeCCCeEEEEEcc--CCCc----c--cccccEE
Q psy12356 62 --------------------LKSLEIEEKINKIRWLRRKNQAHF-LLSTNDQSFNIVDIK--PTNM----E--ELNEVIT 112 (400)
Q Consensus 62 --------------------~~~~~~~~~V~~v~~sp~~~~~~~-l~ss~D~tI~lWd~~--~~~~----~--~~~~~V~ 112 (400)
.....+...|.+++|+|+++ .+ ++++.|++|+|||+. ++.. . .+...|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~--~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 153 (450)
T 2vdu_B 76 LKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDES--RLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPN 153 (450)
T ss_dssp ------------------------CCCCCEEEEEECTTSS--EEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEE
T ss_pred cccCcCccccccCccccCCCCCCCccCCceEEEEEcCCCC--EEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCce
Confidence 00001233599999999874 54 567789999999998 6652 1 3446799
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc--cceeceeccCchhhhhhcccC---cceeecCCCC
Q psy12356 113 AAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN--CNCQGLIVPESKREERQSSQN---RREKEDNRRK 187 (400)
Q Consensus 113 sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d 187 (400)
+++|+|++ ++|++++.|+.|++||+.++..... +...+.. ..+..+ ...++ +..+++++.|
T Consensus 154 ~~~~sp~~-~~l~~~~~~g~v~~~~~~~~~~~~~---~~~~~~~h~~~v~~~----------~~sp~~~~~~~l~s~~~d 219 (450)
T 2vdu_B 154 AISIAEDD-TTVIIADKFGDVYSIDINSIPEEKF---TQEPILGHVSMLTDV----------HLIKDSDGHQFIITSDRD 219 (450)
T ss_dssp EEEECTTS-SEEEEEETTSEEEEEETTSCCCSSC---CCCCSEECSSCEEEE----------EEEECTTSCEEEEEEETT
T ss_pred EEEEcCCC-CEEEEEeCCCcEEEEecCCcccccc---cceeeecccCceEEE----------EEcCCCCCCcEEEEEcCC
Confidence 99999985 7899999999999999988743210 0001110 111222 23355 6566677789
Q ss_pred CeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC
Q psy12356 188 PAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT 266 (400)
Q Consensus 188 g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~ 266 (400)
++|++||++++... .. .+.+|...|.+++|+ +|++|+++ .|++|+|||++++ .+++.+..|.
T Consensus 220 ~~i~vwd~~~~~~~----~~-----------~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~ 282 (450)
T 2vdu_B 220 EHIKISHYPQCFIV----DK-----------WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTG-KNLSTFDYNS 282 (450)
T ss_dssp SCEEEEEESCTTCE----EE-----------ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTC-CEEEEEECHH
T ss_pred CcEEEEECCCCcee----ee-----------eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCC-cEeeeecchh
Confidence 99999999875432 11 123688899999999 99999975 6899999999986 4677775442
Q ss_pred cCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecc-c----chh-----------
Q psy12356 267 KEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASP-R----GIF----------- 330 (400)
Q Consensus 267 ~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~-~----~~~----------- 330 (400)
... .+. ..+...+.. +.... .......|..+.++|||+++++.+ . ++|
T Consensus 283 ~~~--~~~--------~~~~~~~~~--~~~~~----~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~ 346 (450)
T 2vdu_B 283 LIK--PYL--------NDQHLAPPR--FQNEN----NDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLA 346 (450)
T ss_dssp HHG--GGC--------CTTSBC----------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEE
T ss_pred hhh--hhh--------hhccccccc--ccccc----cccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCcee
Confidence 100 000 000000000 00000 012334577788888887765432 1 000
Q ss_pred ----hcccccceeEEEEccCCCEEEEec-------CCeEEEEeCccCCeeEE
Q psy12356 331 ----ADAHTYHISSTSVNSDQETYLSAD-------DLRINLWHLEITDQSFN 371 (400)
Q Consensus 331 ----~~gh~~~V~~i~fspDg~~las~~-------D~~i~lW~~~~~~~~~~ 371 (400)
..+| ..|.+++|+|++.+++.+. ++.|++|.++...+.+.
T Consensus 347 ~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 347 LKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp EEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred eccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 1355 7899999999654444332 44589999876544443
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=214.80 Aligned_cols=252 Identities=14% Similarity=0.115 Sum_probs=167.7
Q ss_pred eeEEEEEECCC----CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe-
Q psy12356 4 YMREASQRFSD----GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR- 78 (400)
Q Consensus 4 ~~v~~v~fspd----G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp- 78 (400)
..|.+++|+|+ |++||+|+.||+|+|||+.++ +.+..+.+|. ..|.+++|+|
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-----------~~~~~~~~~~------------~~i~~~~~~~~ 126 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM-----------QCIKHYVGHG------------NAINELKFHPR 126 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC-----------CEEEEEESCC------------SCEEEEEECSS
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc-----------eEeeeecCCC------------CcEEEEEECCC
Confidence 45899999999 779999999999999999753 2456778887 3599999999
Q ss_pred ccCCceEEEeeCCCeEEEEEccCCCc-------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccccee
Q psy12356 79 RKNQAHFLLSTNDQSFNIVDIKPTNM-------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCL 151 (400)
Q Consensus 79 ~~~~~~~l~ss~D~tI~lWd~~~~~~-------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~ 151 (400)
++. .+++++.|++|++||+++++. ..|...|.+++|+|++ ++|++++.|+.|++||++++..........
T Consensus 127 ~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 203 (366)
T 3k26_A 127 DPN--LLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESY 203 (366)
T ss_dssp CTT--EEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHH
T ss_pred CCC--EEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeE
Confidence 543 677788999999999988762 3567789999999975 789999999999999999875322110000
Q ss_pred c--------cCcccce--eceec---cCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCC-CCc
Q psy12356 152 I--------EGTNCNC--QGLIV---PESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDP-TNK 217 (400)
Q Consensus 152 ~--------~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~-~~~ 217 (400)
. ....... ..... .......+... +...++++.||.|++||++...... ..+...... ...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~---~~~~~~~~~~~~~ 278 (366)
T 3k26_A 204 DYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDI---DKIKPSESNVTIL 278 (366)
T ss_dssp TCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCG---GGCCTTCCCEEEE
T ss_pred EecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccc---cccccCCcchhee
Confidence 0 0000000 00000 00000001111 2345566789999999998764321 111111000 011
Q ss_pred ccccccccCeEEEEECCC--CcEEEEe-cCCeEEEEeCCCCCCcee----eecCCCcCCCCcccCCCCCceeecCccccc
Q psy12356 218 SFFSEIISSISDVKISNS--GRYMISR-DYLCVKVWDLHMESRPVE----TYPTHTKEENGQLRDPSNITALRVPQIKPI 290 (400)
Q Consensus 218 ~~~~~h~~~V~~v~fSpd--g~~las~-~D~tIklWD~~~~~~~l~----~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~ 290 (400)
..+.+|...|.+++|+|+ |++|+++ .|++|++||+.++. ++. .+.+|
T Consensus 279 ~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~------------------------- 332 (366)
T 3k26_A 279 GRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED-PHKAKCTTLTHH------------------------- 332 (366)
T ss_dssp EEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSS-GGGCEEEEECCT-------------------------
T ss_pred ccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC-CccccceEEccc-------------------------
Confidence 124567888999999999 9999975 68999999999753 222 22111
Q ss_pred ceeeccCccceeccccccceEEEEEcCCCcEEeecc
Q psy12356 291 ELTVEASPRRIFANAHTYHINSISVNSDQLTVEASP 326 (400)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~ 326 (400)
.|...|++++|+|||++|++.+
T Consensus 333 --------------~~~~~v~~~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 333 --------------KCGAAIRQTSFSRDSSILIAVC 354 (366)
T ss_dssp --------------TCCSCEEEEEECTTSSEEEEEE
T ss_pred --------------ccCCceEEEEeCCCCCeEEEEe
Confidence 1356788999999998887554
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-25 Score=219.14 Aligned_cols=261 Identities=10% Similarity=0.112 Sum_probs=164.6
Q ss_pred ccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC---------------ccccc------------ccEEEEEEecC
Q psy12356 67 IEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN---------------MEELN------------EVITAAEFHPI 119 (400)
Q Consensus 67 ~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~---------------~~~~~------------~~V~sv~f~p~ 119 (400)
+.+.|.+|+|+|+++ .+++++.|++|+|||+.++. +..|. ..|++++|+|+
T Consensus 27 ~~~~V~~v~~s~~g~--~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 27 EADIISTVEFNHSGE--LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp GGGSEEEEEECSSSS--EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccCcEEEEEECCCCC--EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 346799999999874 67778999999999998654 23455 66999999998
Q ss_pred CC-CEEEEEeCCCeEEEEeccccccccc------ccceecc---Ccccce------------e-ceeccCchh---hhhh
Q psy12356 120 DC-NLFVYSSSKGTIRLCDMRAAALCDR------HSKCLIE---GTNCNC------------Q-GLIVPESKR---EERQ 173 (400)
Q Consensus 120 ~~-~~las~s~Dg~i~lWD~~~~~~~~~------~~~~~~~---~~~~~~------------~-~~~~~~~~~---~~~~ 173 (400)
+. ..|++++.|++|++||+.++..... +...+.. ...... . ...+..++. ..+.
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 53 5899999999999999987532100 0000000 000000 0 000001111 1123
Q ss_pred cccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC-cEEEE-ecCCeEEEEe
Q psy12356 174 SSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG-RYMIS-RDYLCVKVWD 251 (400)
Q Consensus 174 ~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg-~~las-~~D~tIklWD 251 (400)
..+++...+++ .|++|++||++.....- ..+... ...+.+|...|.+++|+|+| ++|++ +.|++|+|||
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~---~~~~~~-----~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 255 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSF---NIVDIK-----PANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCD 255 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEE---EEEECC-----CSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCcee---eeeecc-----cccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEE
Confidence 34566555666 69999999998543221 111100 01145788899999999998 88886 4699999999
Q ss_pred CCCCCCc---eeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccc
Q psy12356 252 LHMESRP---VETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRG 328 (400)
Q Consensus 252 ~~~~~~~---l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~ 328 (400)
++++..+ ++.+.+|..... .. ...+|...|.+++|+|||++|++....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~v~~~~~s~~g~~l~~~~~~ 306 (447)
T 3dw8_B 256 MRASALCDRHSKLFEEPEDPSN----------------------------RS-FFSEIISSISDVKFSHSGRYMMTRDYL 306 (447)
T ss_dssp TTTCSSSCTTCEEECCC---------------------------------CC-HHHHHTTCEEEEEECTTSSEEEEEESS
T ss_pred CcCCccccceeeEeccCCCccc----------------------------cc-cccccCceEEEEEECCCCCEEEEeeCC
Confidence 9986421 566666531100 00 113466678888899888887753321
Q ss_pred ---hh-----------hcccccc---------------eeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 329 ---IF-----------ADAHTYH---------------ISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 329 ---~~-----------~~gh~~~---------------V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
+| ..+|... +.+++|+|||++||++ .|++|++||+...+
T Consensus 307 ~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 307 SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred eEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 11 1355432 3349999999999997 69999999998654
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-24 Score=203.11 Aligned_cols=230 Identities=10% Similarity=0.111 Sum_probs=165.5
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|++|+|+|+|++||+|+.||+|+|||+.++ +.++.+.+|... +.++ ++++. .
T Consensus 69 ~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~-----------~~~~~~~~h~~~------------~~~~--~~~~~--~ 121 (318)
T 4ggc_A 69 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ-----------KRLRNMTSHSAR------------VGSL--SWNSY--I 121 (318)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTT-----------EEEEEEECCSSC------------EEEE--EEETT--E
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEeecCCc-----------eeEEEecCccce------------EEEe--ecCCC--E
Confidence 5899999999999999999999999999853 356788888742 4444 44432 6
Q ss_pred EEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 85 FLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
+++++.++.+++|+...+. +..|...+..+.|++++ +++++++.|++|++||+++++............ ...+
T Consensus 122 l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~v 199 (318)
T 4ggc_A 122 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH-QGAV 199 (318)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCC-CSCE
T ss_pred EEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeeccc-CCce
Confidence 6678899999999987764 23567789999999985 789999999999999999874321110000000 0011
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
....+.+ ........++++.+++|++||.+...... ...+...+..+.|+|+++.+
T Consensus 200 ~~~~~~~-------~~~~~~~~~~~~~~~~i~lwd~~~~~~~~-----------------~~~~~~~v~~~~~~~~~~~~ 255 (318)
T 4ggc_A 200 KAVAWCP-------WQSNVLATGGGTSDRHIRIWNVCSGACLS-----------------AVDAHSQVCSILWSPHYKEL 255 (318)
T ss_dssp EEEEECT-------TSTTEEEEEECTTTCEEEEEETTTCCEEE-----------------EEECSSCEEEEEEETTTTEE
T ss_pred EEEEecC-------CCCcEEEEEecCCCCEEEEEecccccccc-----------------cccceeeeeeeeecccccce
Confidence 1111110 01222345677889999999988654311 11345679999999999987
Q ss_pred EE-e--cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCccc
Q psy12356 240 IS-R--DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIK 288 (400)
Q Consensus 240 as-~--~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~ 288 (400)
++ + .|++|+|||++++ .+++++++|. ++|+|+++ +++.|++|++|++.
T Consensus 256 ~~~sg~~d~~i~iwd~~~~-~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 256 ISGHGFAQNQLVIWKYPTM-AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EEEECTTTCCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEEEcCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 64 3 4899999999986 5789999995 56888865 57899999999874
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=217.58 Aligned_cols=241 Identities=10% Similarity=0.027 Sum_probs=161.2
Q ss_pred eeEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..|.+++|+| ++++||+|+.|++|+|||+.+. ....+..|.. +...|.+++|+|+++
T Consensus 119 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~------------~~~~~~~~~~---------~~~~v~~~~~~~~~~- 176 (383)
T 3ei3_B 119 DAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS------------VIQVFAKTDS---------WDYWYCCVDVSVSRQ- 176 (383)
T ss_dssp CBEEEEEEETTEEEEEEEEETTTEEEEEETTSC------------EEEEEECCCC---------SSCCEEEEEEETTTT-
T ss_pred CceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC------------ceEEEeccCC---------CCCCeEEEEECCCCC-
Confidence 5789999999 7899999999999999999742 2334444431 124599999999874
Q ss_pred ceEEEeeCCCeEEEEEccCCC---cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc-ccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTN---MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT-NCN 158 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~---~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~-~~~ 158 (400)
.+++++.|++|++||++... +..|...|.+++|+|++..+|++++.|++|++||+++..... .++.... ...
T Consensus 177 -~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~ 252 (383)
T 3ei3_B 177 -MLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN---SYIAEMPHEKP 252 (383)
T ss_dssp -EEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT---CEEEEEECSSC
T ss_pred -EEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc---ceEEEecCCCc
Confidence 77788999999999995433 345678899999999865489999999999999999842110 1111110 111
Q ss_pred eeceeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCCCCC------CcccccccccCeEEEE
Q psy12356 159 CQGLIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT------NKSFFSEIISSISDVK 231 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~------~~~~~~~h~~~V~~v~ 231 (400)
+..+ ...+ ++...++++.|+.|++||++++... ..+..+.... ....+ .....+..++
T Consensus 253 v~~~----------~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~ 317 (383)
T 3ei3_B 253 VNAA----------YFNPTDSTKLLTTDQRNEIRVYSSYDWSKP----DQIIIHPHRQFQHLTPIKATW-HPMYDLIVAG 317 (383)
T ss_dssp EEEE----------EECTTTSCEEEEEESSSEEEEEETTBTTSC----SEEEECCBCCCTTSCCCCCEE-CSSSSEEEEE
T ss_pred eEEE----------EEcCCCCCEEEEEcCCCcEEEEECCCCccc----cccccccccccccccceEEec-cCCCCceEEE
Confidence 2222 2335 6666667778999999999976542 1221111000 00000 0113455678
Q ss_pred ECCCCcEEEEecCCeEEEEeCCCCCCceeeecCCC---------cCCCCcccCCCCCceeecCcc
Q psy12356 232 ISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHT---------KEENGQLRDPSNITALRVPQI 287 (400)
Q Consensus 232 fSpdg~~las~~D~tIklWD~~~~~~~l~~~~~h~---------~~~~g~~~~~~~~~~i~l~~~ 287 (400)
|+|||++ .++.|++|+|||+.++. +++.+.+|. +.++|++++.+.++.|++|++
T Consensus 318 ~s~dg~~-s~s~d~~i~iwd~~~~~-~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~ 380 (383)
T 3ei3_B 318 RYPDDQL-LLNDKRTIDIYDANSGG-LVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNR 380 (383)
T ss_dssp CBCCTTT-CTTCCCCEEEEETTTCC-EEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEEC
T ss_pred ecCCccc-ccCCCCeEEEEecCCCc-eeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEec
Confidence 8888887 44578999999999864 678887642 456777654223677777765
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.5e-25 Score=210.28 Aligned_cols=208 Identities=13% Similarity=0.161 Sum_probs=149.6
Q ss_pred eeEEEEEECCC--CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSD--GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspd--G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
..|++++|+|+ |++||+|+.||+|+|||+.++ .......+.+|. ..|.+++|+|+..
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---------~~~~~~~~~~~~------------~~v~~~~~~~~~~ 114 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG---------RWSQIAVHAVHS------------ASVNSVQWAPHEY 114 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT---------EEEEEEEECCCS------------SCEEEEEECCGGG
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC---------ceeEeeeecCCC------------cceEEEEeCCCCC
Confidence 46899999988 999999999999999999753 222455666776 3599999999832
Q ss_pred CceEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecC------------CCCEEEEEeCCCeEEEEecccccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPI------------DCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~------------~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
+..+++++.|++|++||+.++. +..+...|++++|+|. ++.+|++++.|++|++||++++..
T Consensus 115 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 194 (379)
T 3jrp_A 115 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 194 (379)
T ss_dssp CSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT
T ss_pred CCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc
Confidence 2377788999999999998774 2346678999999994 357999999999999999987632
Q ss_pred cccccceeccCc--ccceeceeccCchhhhhhcccC---cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcc
Q psy12356 144 CDRHSKCLIEGT--NCNCQGLIVPESKREERQSSQN---RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKS 218 (400)
Q Consensus 144 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 218 (400)
... ....+. ...+..+. ..|+ +...++++.||.|++||++.+..... ...+.
T Consensus 195 ~~~---~~~~~~~h~~~v~~~~----------~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~--------- 251 (379)
T 3jrp_A 195 TYV---LESTLEGHSDWVRDVA----------WSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK-KTLLK--------- 251 (379)
T ss_dssp EEE---EEEEECCCSSCEEEEE----------ECCCCSSSEEEEEEETTSCEEEEEESSTTSCCE-EEESS---------
T ss_pred cee---eEEEEecccCcEeEEE----------ECCCCCCCCeEEEEeCCCEEEEEeCCCCCccce-eeeec---------
Confidence 110 111111 01122222 3355 55667777899999999987532100 00000
Q ss_pred cccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCC
Q psy12356 219 FFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMES 256 (400)
Q Consensus 219 ~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~ 256 (400)
...|...|.+++|+|+|++|++ +.|++|++||+..+.
T Consensus 252 -~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 252 -EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp -SSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred -cccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 1246788999999999999986 578999999998653
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-24 Score=204.45 Aligned_cols=229 Identities=14% Similarity=0.097 Sum_probs=165.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|+|++||+|+.||.|++|++.... ..+....+.+|.. .|.+++|. + .
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--------~~~~~~~~~~~~~------------~i~~~~~~--~--~ 115 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATS--------GEDPLYTLIGHQG------------NVCSLSFQ--D--G 115 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCT--------TSCC-CEECCCSS------------CEEEEEEE--T--T
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecC--------CCCcccchhhccc------------CEEEEEec--C--C
Confidence 468999999999999999999999999987642 1233456777763 48899993 2 2
Q ss_pred eEEEeeCCCeEEEEEccCCC--cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN--MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~--~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
.+++++.|++|++||..... +..+...|.+++|+|.+++++++++.|+.|++||....... ........+..
T Consensus 116 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~------~~~~~~~~i~~ 189 (313)
T 3odt_A 116 VVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKT------FSGIHNDVVRH 189 (313)
T ss_dssp EEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEE------ECSSCSSCEEE
T ss_pred EEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEE------EeccCcccEEE
Confidence 78888999999999922111 34567789999999944689999999999999995443110 00000111112
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las 241 (400)
+. ..+++. .++++.||.|++||++++... .. +.+|...|.+++|+|+|+++++
T Consensus 190 ~~----------~~~~~~-~~~~~~dg~i~i~d~~~~~~~----~~------------~~~~~~~i~~~~~~~~~~l~~~ 242 (313)
T 3odt_A 190 LA----------VVDDGH-FISCSNDGLIKLVDMHTGDVL----RT------------YEGHESFVYCIKLLPNGDIVSC 242 (313)
T ss_dssp EE----------EEETTE-EEEEETTSEEEEEETTTCCEE----EE------------EECCSSCEEEEEECTTSCEEEE
T ss_pred EE----------EcCCCe-EEEccCCCeEEEEECCchhhh----hh------------hhcCCceEEEEEEecCCCEEEE
Confidence 22 224444 555668999999999876432 11 3467789999999999975556
Q ss_pred ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCcccCCCCCceeecCccccc
Q psy12356 242 RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLRDPSNITALRVPQIKPI 290 (400)
Q Consensus 242 ~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~~~~~~~~i~l~~~~~~ 290 (400)
+.|++|++||++++ .+++.+..|. +.++|++++++.++.+++|++...
T Consensus 243 ~~dg~v~iwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 243 GEDRTVRIWSKENG-SLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp ETTSEEEEECTTTC-CEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred ecCCEEEEEECCCC-ceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 78999999999986 4677888775 467888877788889999987543
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=214.39 Aligned_cols=205 Identities=10% Similarity=0.089 Sum_probs=145.3
Q ss_pred eeEEEEEECC--CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFS--DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fsp--dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
+.|++|+|+| +|++||||+.|++|+|||+.++ ..+....+.+|.. .|++|+|+|+..
T Consensus 58 ~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~---------~~~~~~~~~~h~~------------~V~~v~~~p~~~ 116 (316)
T 3bg1_A 58 GPVWQVAWAHPMYGNILASCSYDRKVIIWREENG---------TWEKSHEHAGHDS------------SVNSVCWAPHDY 116 (316)
T ss_dssp SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS---------CCCEEEEECCCSS------------CCCEEEECCTTT
T ss_pred ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC---------cceEEEEccCCCC------------ceEEEEECCCCC
Confidence 4689999986 4999999999999999998753 1233456778873 499999999843
Q ss_pred CceEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCC----------------CCEEEEEeCCCeEEEEec
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPID----------------CNLFVYSSSKGTIRLCDM 138 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~----------------~~~las~s~Dg~i~lWD~ 138 (400)
+..+++++.|++|+|||++++. +..|...|.+++|+|+. +.+||+++.|++|++||+
T Consensus 117 g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~ 196 (316)
T 3bg1_A 117 GLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKE 196 (316)
T ss_dssp CSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEE
T ss_pred CcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEe
Confidence 3467778999999999997652 23456678999999973 258999999999999999
Q ss_pred ccccccccccceeccCccc--ceeceeccCchhhhhhcccCc----ceeecCCCCCeEEEeecccccccCcccccccCCC
Q psy12356 139 RAAALCDRHSKCLIEGTNC--NCQGLIVPESKREERQSSQNR----REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPE 212 (400)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~ 212 (400)
+.+... .++..+..+ .+..+.+ +|++ ..+++++.|++|++||++........
T Consensus 197 ~~~~~~----~~~~~l~~h~~~V~~v~~----------sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~-------- 254 (316)
T 3bg1_A 197 EEDGQW----KEEQKLEAHSDWVRDVAW----------APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWS-------- 254 (316)
T ss_dssp CTTSCE----EEEECCBCCSSCEEEEEC----------CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCB--------
T ss_pred CCCCcc----ceeeecccCCCceEEEEe----------cCCCCCCCceEEEEcCCCeEEEEEccCccccchh--------
Confidence 754110 011111111 1222223 2432 44667778999999998763211000
Q ss_pred CCCCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCC
Q psy12356 213 DPTNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHME 255 (400)
Q Consensus 213 ~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~ 255 (400)
...+.+|...|.+++|+|+|++||+ +.|++|+||+....
T Consensus 255 ----~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 255 ----PKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp ----CCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred ----hhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 0113367789999999999999997 57999999998744
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=212.69 Aligned_cols=227 Identities=11% Similarity=0.173 Sum_probs=164.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|||++||+|+.||.|+|||+.++ +.++.+.+|.. .|.+++|++ .
T Consensus 135 ~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~-----------~~~~~~~~~~~------------~v~~~~~~~----~ 187 (401)
T 4aez_A 135 TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ-----------TKLRTMAGHQA------------RVGCLSWNR----H 187 (401)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEETTTC-----------CEEEEECCCSS------------CEEEEEEET----T
T ss_pred CCEEEEEECCCCCEEEEECCCCeEEEEECcCC-----------eEEEEecCCCC------------ceEEEEECC----C
Confidence 46899999999999999999999999999753 24567778873 489999953 2
Q ss_pred eEEEeeCCCeEEEEEccCCC-----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++++.|++|++||++... +..|...|.+++|+|+ +++|++++.|++|++||++++........+ ...
T Consensus 188 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-----~~~ 261 (401)
T 4aez_A 188 VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD-GLQLASGGNDNVVQIWDARSSIPKFTKTNH-----NAA 261 (401)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCSSEEEEECCC-----SSC
T ss_pred EEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEccCCCCCccEEecCC-----cce
Confidence 67788999999999998433 3457788999999997 479999999999999999987432211000 011
Q ss_pred eeceeccCchhhhhhcccCc-ce--eecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 159 CQGLIVPESKREERQSSQNR-RE--KEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
+..+.+ .+++ .. +++++.|+.|++||++++... ..+ .|...|.+++|+|+
T Consensus 262 v~~~~~----------~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~----~~~-------------~~~~~v~~~~~s~~ 314 (401)
T 4aez_A 262 VKAVAW----------CPWQSNLLATGGGTMDKQIHFWNAATGARV----NTV-------------DAGSQVTSLIWSPH 314 (401)
T ss_dssp CCEEEE----------CTTSTTEEEEECCTTTCEEEEEETTTCCEE----EEE-------------ECSSCEEEEEECSS
T ss_pred EEEEEE----------CCCCCCEEEEecCCCCCEEEEEECCCCCEE----EEE-------------eCCCcEEEEEECCC
Confidence 112222 2322 22 333558999999999876432 111 24467999999999
Q ss_pred CcEEEE--e-cCCeEEEEeCCCCC-CceeeecCCC-------cCCCCccc-CCCCCceeecCccccc
Q psy12356 236 GRYMIS--R-DYLCVKVWDLHMES-RPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPI 290 (400)
Q Consensus 236 g~~las--~-~D~tIklWD~~~~~-~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~ 290 (400)
|++|++ + .|++|+|||+.++. .++..+.+|. +.++|+++ +++.++++++|++...
T Consensus 315 ~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 315 SKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp SSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred CCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 999986 3 48999999999753 2233456774 46788864 5778899999987543
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.4e-25 Score=209.23 Aligned_cols=233 Identities=15% Similarity=0.132 Sum_probs=162.2
Q ss_pred eeEEEEEECCC---CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE---
Q psy12356 4 YMREASQRFSD---GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL--- 77 (400)
Q Consensus 4 ~~v~~v~fspd---G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s--- 77 (400)
..|.+++|+|+ |++||+|+.||+|++||+.+.+ ..+..+.+|.. .|.+++|.
T Consensus 66 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----------~~~~~~~~~~~------------~v~~~~~~~~~ 123 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE----------MPVYSVKGHKE------------IINAIDGIGGL 123 (357)
T ss_dssp SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS----------SCSEEECCCSS------------CEEEEEEESGG
T ss_pred CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC----------ccEEEEEeccc------------ceEEEeecccc
Confidence 36899999999 7999999999999999998542 13456778873 48888664
Q ss_pred ---eccCCceEEEeeCCCeEEEEEccCCC-c----ccc----cccEEEEE----EecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 78 ---RRKNQAHFLLSTNDQSFNIVDIKPTN-M----EEL----NEVITAAE----FHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 78 ---p~~~~~~~l~ss~D~tI~lWd~~~~~-~----~~~----~~~V~sv~----f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
|+++ .+++++.|++|++||+.++. . ..+ ...|++++ |+|+ +++|++++.|+.|++||++++
T Consensus 124 ~~s~~~~--~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~ 200 (357)
T 3i2n_A 124 GIGEGAP--EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE-ERVVCAGYDNGDIKLFDLRNM 200 (357)
T ss_dssp GCC-CCC--EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C-CCEEEEEETTSEEEEEETTTT
T ss_pred ccCCCcc--EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC-CCEEEEEccCCeEEEEECccC
Confidence 5543 67778999999999998765 1 122 23688888 6787 479999999999999999988
Q ss_pred cccccccceeccCcccceeceeccCchhhhhhccc---CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcc
Q psy12356 142 ALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQ---NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKS 218 (400)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 218 (400)
..... ... ...+..+.+ .+ ++...++++.||.|++||++.+.... .+.. .
T Consensus 201 ~~~~~-----~~~-~~~v~~~~~----------~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~-------~ 253 (357)
T 3i2n_A 201 ALRWE-----TNI-KNGVCSLEF----------DRKDISMNKLVATSLEGKFHVFDMRTQHPTK----GFAS-------V 253 (357)
T ss_dssp EEEEE-----EEC-SSCEEEEEE----------SCSSSSCCEEEEEESTTEEEEEEEEEEETTT----EEEE-------E
T ss_pred ceeee-----cCC-CCceEEEEc----------CCCCCCCCEEEEECCCCeEEEEeCcCCCccc----ceee-------e
Confidence 53211 000 011222222 24 45455566789999999999764321 1100 0
Q ss_pred cccccccCeEEEEECCCCc-EEEE-ecCCeEEEEeCCCCCC------------------ceeeecCCC-------cCCCC
Q psy12356 219 FFSEIISSISDVKISNSGR-YMIS-RDYLCVKVWDLHMESR------------------PVETYPTHT-------KEENG 271 (400)
Q Consensus 219 ~~~~h~~~V~~v~fSpdg~-~las-~~D~tIklWD~~~~~~------------------~l~~~~~h~-------~~~~g 271 (400)
.+.+|...|.+++|+|+++ +|++ +.|++|+|||++++.. ++..+.+|. +.++|
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 333 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDK 333 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSS
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCC
Confidence 1236788999999999999 6776 4689999999987532 355666774 45777
Q ss_pred ccc--CCCCCceeecCccc
Q psy12356 272 QLR--DPSNITALRVPQIK 288 (400)
Q Consensus 272 ~~~--~~~~~~~i~l~~~~ 288 (400)
+++ +++.++.+++|++.
T Consensus 334 ~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 334 RGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp TTEEEEEETTSEEEEEEEC
T ss_pred CeEEEEecCCCcEEEEECC
Confidence 754 46677788887763
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-24 Score=212.03 Aligned_cols=246 Identities=14% Similarity=0.141 Sum_probs=173.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|.+++|+|++ +||+|+.||+|+|||+.++ +.+..+.+|.. .|.+++|+|..+..
T Consensus 163 ~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~-----------~~~~~~~~h~~------------~v~~l~~~~~~~~~ 218 (464)
T 3v7d_B 163 GGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG-----------CCTHVFEGHNS------------TVRCLDIVEYKNIK 218 (464)
T ss_dssp SCEEEEEECSTT-EEEEEETTSCEEEEETTTT-----------EEEEEECCCSS------------CEEEEEEEESSSCE
T ss_pred cCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC-----------cEEEEECCCCC------------ccEEEEEecCCCCC
Confidence 468999999999 9999999999999999753 34667888873 49999999754334
Q ss_pred eEEEeeCCCeEEEEEccCCCc---------------------------ccccccEEEEEEecCCCCEEEEEeCCCeEEEE
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM---------------------------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLC 136 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~---------------------------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lW 136 (400)
.+++++.|++|++||+.++.. ..|...|.++ +|+ ++++++++.|++|++|
T Consensus 219 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~-~~~l~~~~~d~~i~vw 295 (464)
T 3v7d_B 219 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGH-GNIVVSGSYDNTLIVW 295 (464)
T ss_dssp EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEE-TTEEEEEETTSCEEEE
T ss_pred EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCC-CCEEEEEeCCCeEEEE
Confidence 677789999999999987641 1234456665 454 3689999999999999
Q ss_pred ecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCC
Q psy12356 137 DMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTN 216 (400)
Q Consensus 137 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 216 (400)
|++++........+ ...+..+. ..+++...++++.||+|++||++++... ..
T Consensus 296 d~~~~~~~~~~~~~-----~~~v~~~~----------~~~~~~~l~sg~~dg~i~vwd~~~~~~~----~~--------- 347 (464)
T 3v7d_B 296 DVAQMKCLYILSGH-----TDRIYSTI----------YDHERKRCISASMDTTIRIWDLENGELM----YT--------- 347 (464)
T ss_dssp ETTTTEEEEEECCC-----SSCEEEEE----------EETTTTEEEEEETTSCEEEEETTTTEEE----EE---------
T ss_pred ECCCCcEEEEecCC-----CCCEEEEE----------EcCCCCEEEEEeCCCcEEEEECCCCcEE----EE---------
Confidence 99988433211100 01122222 2355556667778999999999876532 11
Q ss_pred cccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeec-CC-----CcCCCCcccCCCCCceeecCcccc
Q psy12356 217 KSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYP-TH-----TKEENGQLRDPSNITALRVPQIKP 289 (400)
Q Consensus 217 ~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~-~h-----~~~~~g~~~~~~~~~~i~l~~~~~ 289 (400)
+.+|...|.+++|+ +++|++ +.|++|++||++++.. ...+. .+ .+.+++.+++.+.++.+++|++..
T Consensus 348 ---~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 348 ---LQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR-KFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRS 421 (464)
T ss_dssp ---ECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE-EEEEECTTCCCEEEEEECSSEEEEEETTEEEEEETTT
T ss_pred ---EeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce-eeeecCCCCccEEEEEeCCCEEEEecCCeEEEEECCC
Confidence 34678899999998 467776 5799999999998643 33332 11 145678876544488999999865
Q ss_pred cceeeccCccceeccccccceEEEEEc
Q psy12356 290 IELTVEASPRRIFANAHTYHINSISVN 316 (400)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~i~~i~~s 316 (400)
.+.. +....+|...|++++|+
T Consensus 422 g~~~------~~~~~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 422 GKLV------HANILKDADQIWSVNFK 442 (464)
T ss_dssp CCEE------ESCTTTTCSEEEEEEEE
T ss_pred CcEE------ehhhccCCCcEEEEEec
Confidence 4332 11234678889999997
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-24 Score=207.23 Aligned_cols=245 Identities=9% Similarity=0.087 Sum_probs=166.4
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
+.|.+++|+|+++ .+++++.|++|+|||+++++ +..|...|++++|+|++ ++|++++.|++|++||++++.
T Consensus 9 ~~i~~~~~s~~~~--~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 9 EPISCHAWNKDRT--QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCCCEEEECTTSS--EEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTE
T ss_pred CCeEEEEECCCCC--EEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCe
Confidence 4599999999874 66677899999999998874 23567889999999975 799999999999999998874
Q ss_pred ccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccc
Q psy12356 143 LCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222 (400)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
..... ..... ...+..+. ..+++...++++.|+.|++||++....... .. ....+
T Consensus 86 ~~~~~--~~~~~-~~~v~~~~----------~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~-~~-----------~~~~~ 140 (372)
T 1k8k_C 86 WKPTL--VILRI-NRAARCVR----------WAPNEKKFAVGSGSRVISICYFEQENDWWV-CK-----------HIKKP 140 (372)
T ss_dssp EEEEE--ECCCC-SSCEEEEE----------ECTTSSEEEEEETTSSEEEEEEETTTTEEE-EE-----------EECTT
T ss_pred eeeeE--EeecC-CCceeEEE----------ECCCCCEEEEEeCCCEEEEEEecCCCccee-ee-----------eeecc
Confidence 21110 00000 11122222 235555566667899999999987542100 00 11235
Q ss_pred cccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccce
Q psy12356 223 IISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRI 301 (400)
Q Consensus 223 h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~ 301 (400)
|...|.+++|+|++++|+++ .|++|++||++.....-... . ..|... ...+.....
T Consensus 141 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~----------------~~~~~~----~~~~~~~~~ 197 (372)
T 1k8k_C 141 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA---P----------------TPWGSK----MPFGELMFE 197 (372)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCC---C----------------BTTBSC----CCTTCEEEE
T ss_pred cCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccc---c----------------cccccc----cchhhheEe
Confidence 67899999999999999875 68999999997542110000 0 000000 000111111
Q ss_pred eccccccceEEEEEcCCCcEEeecccc----hh----------hcccccceeEEEEccCCCEEEEecCCeEEEEeCcc
Q psy12356 302 FANAHTYHINSISVNSDQLTVEASPRG----IF----------ADAHTYHISSTSVNSDQETYLSADDLRINLWHLEI 365 (400)
Q Consensus 302 ~~~~~~~~i~~i~~s~dg~~~~~~~~~----~~----------~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~ 365 (400)
+ .+|...|.+++|+|||+++++.+.. +| ..+|...|.+++|+|||++|+++.|+.|++|++..
T Consensus 198 ~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 198 S-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp C-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred c-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 2 3678889999999999887754321 11 14788899999999999999999999999999986
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=215.92 Aligned_cols=206 Identities=8% Similarity=0.085 Sum_probs=140.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|+|++||+|+.||+|+|||+.++. ..+....+.+|. ..|.+++|+|+++
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~--------~~~~~~~~~~~~------------~~v~~~~~~~~~~-- 113 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG--------TWKQTLVLLRLN------------RAATFVRWSPNED-- 113 (377)
T ss_dssp SCEEEEEECTTTCCEEEEETTSSEEEC--------------CCCCEEECCCCS------------SCEEEEECCTTSS--
T ss_pred ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC--------ceeeeeEecccC------------CceEEEEECCCCC--
Confidence 468999999999999999999999999998642 122344566776 3599999999864
Q ss_pred eEEEeeCCCeEEEEEccCCC-------ccc-ccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccc---------
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------MEE-LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR--------- 146 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------~~~-~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~--------- 146 (400)
.+++++.|++|++||+++++ +.. |...|++++|+|++ ++|++++.|++|++||++.......
T Consensus 114 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 192 (377)
T 3dwl_C 114 KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSR 192 (377)
T ss_dssp CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSC
T ss_pred EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCccccccccc
Confidence 78888999999999998764 233 67789999999975 7999999999999999975422110
Q ss_pred --ccceeccCc-ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccc
Q psy12356 147 --HSKCLIEGT-NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEI 223 (400)
Q Consensus 147 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 223 (400)
...++..+. ...+.. +..+|++...++++.||+|++||++++....... ..+.+|
T Consensus 193 ~~~~~~~~~~~~~~~v~~----------~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------------~~~~~~ 250 (377)
T 3dwl_C 193 LPFNTVCAEYPSGGWVHA----------VGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL------------ITVKLS 250 (377)
T ss_dssp CCEEEEEECCCCSSSEEE----------EEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC------------CCEECS
T ss_pred cchhhhhhcccCCceEEE----------EEECCCCCEEEEEeCCCcEEEEECCCCCCcceee------------EeecCC
Confidence 001111110 001112 2334666666777789999999999765311001 113477
Q ss_pred ccCeEEEEECCCCcEEEEecCCeEEEEeCCC
Q psy12356 224 ISSISDVKISNSGRYMISRDYLCVKVWDLHM 254 (400)
Q Consensus 224 ~~~V~~v~fSpdg~~las~~D~tIklWD~~~ 254 (400)
...|.+++|+|+|++|+++.++.+.+|+...
T Consensus 251 ~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 251 QLPLRSLLWANESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp SSCEEEEEEEETTEEEEEESSSSEEEECCCC
T ss_pred CCceEEEEEcCCCCEEEEEcCCcEEEEEeCC
Confidence 8899999999999999987665555777764
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-24 Score=210.98 Aligned_cols=198 Identities=11% Similarity=0.108 Sum_probs=135.9
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeee-----eeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYS-----TFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~-----~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
+.+++|+|++.++++++.|++|++||+.+++ ..+ .+.+|. ..|.+++|+|++
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~-----------~~~~~~~~~~~~~~------------~~v~~~~~~~~~ 181 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQ-----------TVRLSPPEKYKKKL------------GFVETISIPEHN 181 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCC-----------EEEECCCHHHHTTC------------CEEEEEEEGGGT
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCe-----------EeeecCcccccccC------------CceeEEEEcCCC
Confidence 5689999988999999999999999998643 122 233444 458999998875
Q ss_pred CCceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 81 NQAHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 81 ~~~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
. .+++++.|++|++||+++++. ..+...+.+++|+|++..++++++.|++|++||++++........ .
T Consensus 182 ~--~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~------~ 253 (433)
T 3bws_A 182 E--LWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK------I 253 (433)
T ss_dssp E--EEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC------C
T ss_pred E--EEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC------C
Confidence 3 555677899999999988763 235567999999998754556666899999999998743221110 0
Q ss_pred cceeceeccCchhhhhhcccCcceeecCC--------CCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeE
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNR--------RKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
.....+.+ .+++...+.++ .||.|++||+++++... . ..|...+.
T Consensus 254 ~~~~~~~~----------~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~----~-------------~~~~~~~~ 306 (433)
T 3bws_A 254 GLPRGLLL----------SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID----T-------------IGPPGNKR 306 (433)
T ss_dssp SEEEEEEE----------CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE----E-------------EEEEECEE
T ss_pred CCceEEEE----------cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe----e-------------ccCCCCcc
Confidence 11222222 24442222211 48899999998764321 1 13445788
Q ss_pred EEEECCCCcEE-EE-ecCCeEEEEeCCCCCCceeee
Q psy12356 229 DVKISNSGRYM-IS-RDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 229 ~v~fSpdg~~l-as-~~D~tIklWD~~~~~~~l~~~ 262 (400)
+++|+|+|+.| ++ +.|++|++||+.++ .++..+
T Consensus 307 ~~~~~~~g~~l~~~~~~~~~v~v~d~~~~-~~~~~~ 341 (433)
T 3bws_A 307 HIVSGNTENKIYVSDMCCSKIEVYDLKEK-KVQKSI 341 (433)
T ss_dssp EEEECSSTTEEEEEETTTTEEEEEETTTT-EEEEEE
T ss_pred eEEECCCCCEEEEEecCCCEEEEEECCCC-cEEEEe
Confidence 99999999865 45 46899999999975 345554
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-23 Score=198.48 Aligned_cols=247 Identities=11% Similarity=0.118 Sum_probs=161.7
Q ss_pred CcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecC
Q psy12356 44 GEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPI 119 (400)
Q Consensus 44 ~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~ 119 (400)
|.......+.+|. ..|++++|+|++. .+++++.|++|+|||+.+++ +..|...|++++|+|+
T Consensus 20 G~~~~~~~l~~h~------------~~v~~~~~s~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~ 85 (369)
T 3zwl_B 20 GSHMKAIKLTGHE------------RPLTQVKYNKEGD--LLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCF 85 (369)
T ss_dssp CCSEEEEEEECCS------------SCEEEEEECTTSC--EEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred ccccccEEEEEee------------ceEEEEEEcCCCC--EEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCC
Confidence 3333345678887 4599999999874 67778899999999998877 3457788999999997
Q ss_pred CCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCC-----CeEEEee
Q psy12356 120 DCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRK-----PAIRLCD 194 (400)
Q Consensus 120 ~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----g~i~lWD 194 (400)
+ ++|++++.|++|++||++++....... ....+..+.+ .+++...+.++.+ |.|++||
T Consensus 86 ~-~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~v~~~~~----------~~~~~~l~~~~~~~~~~~g~i~~~d 148 (369)
T 3zwl_B 86 T-KYCVTGSADYSIKLWDVSNGQCVATWK------SPVPVKRVEF----------SPCGNYFLAILDNVMKNPGSINIYE 148 (369)
T ss_dssp S-SEEEEEETTTEEEEEETTTCCEEEEEE------CSSCEEEEEE----------CTTSSEEEEEECCBTTBCCEEEEEE
T ss_pred C-CEEEEEeCCCeEEEEECCCCcEEEEee------cCCCeEEEEE----------ccCCCEEEEecCCccCCCCEEEEEE
Confidence 5 799999999999999999885432111 0111222222 3455444444455 9999999
Q ss_pred cccccccCcccccccCCCCCCCccccccccc--CeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCC
Q psy12356 195 MRAAALCDRHSKFFEEPEDPTNKSFFSEIIS--SISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENG 271 (400)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g 271 (400)
++........ .... . . ....+..|.. .+.+++|+|++++|+++ .|+.|++||+++...++..+.+|.
T Consensus 149 ~~~~~~~~~~-~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----- 218 (369)
T 3zwl_B 149 IERDSATHEL-TKVS--E-E-PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE----- 218 (369)
T ss_dssp EEECTTTCCE-EEEC--S-S-CSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS-----
T ss_pred ecCCccceee-cccc--c-c-eeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC-----
Confidence 9875432110 0000 0 0 0011234444 89999999999999864 689999999998545566665553
Q ss_pred cccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccc----hh---------hcccccce
Q psy12356 272 QLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRG----IF---------ADAHTYHI 338 (400)
Q Consensus 272 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~----~~---------~~gh~~~V 338 (400)
..|.+++|+|||+++++.... +| ...|...+
T Consensus 219 ------------------------------------~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 262 (369)
T 3zwl_B 219 ------------------------------------KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPL 262 (369)
T ss_dssp ------------------------------------SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE
T ss_pred ------------------------------------CceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCc
Confidence 223344444444443322110 00 01356678
Q ss_pred eEEEEccCCCEEEEe-cCC--------------eEEEEeCccCC
Q psy12356 339 SSTSVNSDQETYLSA-DDL--------------RINLWHLEITD 367 (400)
Q Consensus 339 ~~i~fspDg~~las~-~D~--------------~i~lW~~~~~~ 367 (400)
.+++|+|++++++++ .++ .|++|++...+
T Consensus 263 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 263 NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 899999999999886 565 78888887544
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=210.93 Aligned_cols=227 Identities=11% Similarity=0.140 Sum_probs=150.5
Q ss_pred eeEEEEEECCC----C---CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEE
Q psy12356 4 YMREASQRFSD----G---ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 76 (400)
Q Consensus 4 ~~v~~v~fspd----G---~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~ 76 (400)
..|.+++|+|+ | ++||+++.||+|++||+.+.... ....+..+.+|.... ....|.+++|
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~------~~~~~~~~~~~~~~~-------~~~~v~~~~~ 129 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET------KKVIFEKLDLLDSDM-------KKHSFWALKW 129 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTT------CCEEEEEECCSCTTG-------GGSCEEEEEE
T ss_pred CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccc------ccccceeeccccccc-------CCCcEEEEEE
Confidence 35899999999 9 99999999999999998754310 011145666663100 0135999999
Q ss_pred E----eccCCce-EEEeeCCCeEEEEEccC------CCc-c---------------cccccEEEEEEecCCCCEEEEEeC
Q psy12356 77 L----RRKNQAH-FLLSTNDQSFNIVDIKP------TNM-E---------------ELNEVITAAEFHPIDCNLFVYSSS 129 (400)
Q Consensus 77 s----p~~~~~~-~l~ss~D~tI~lWd~~~------~~~-~---------------~~~~~V~sv~f~p~~~~~las~s~ 129 (400)
+ |+++ . +++++.|+.|++||+.+ +.. . .+...|++++|+|++ +|++++.
T Consensus 130 ~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~ 205 (397)
T 1sq9_A 130 GASNDRLLS--HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFN 205 (397)
T ss_dssp ECCC----C--EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECT
T ss_pred eeccCCCCc--eEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeC
Confidence 9 8764 6 77788999999999987 442 2 135678999999975 8999999
Q ss_pred CCeEEEEecccccccccccceeccC--cccceeceeccCchhhhhhcccCcceeecCCCC---CeEEEeecccccccCcc
Q psy12356 130 KGTIRLCDMRAAALCDRHSKCLIEG--TNCNCQGLIVPESKREERQSSQNRREKEDNRRK---PAIRLCDMRAAALCDRH 204 (400)
Q Consensus 130 Dg~i~lWD~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---g~i~lWD~~~~~~~~~~ 204 (400)
|+.|++||++++........ .... ....+..+. ..+++...++++.| |.|++||++++...
T Consensus 206 dg~i~i~d~~~~~~~~~~~~-~~~h~~~~~~i~~i~----------~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~--- 271 (397)
T 1sq9_A 206 NGTVQISELSTLRPLYNFES-QHSMINNSNSIRSVK----------FSPQGSLLAIAHDSNSFGCITLYETEFGERI--- 271 (397)
T ss_dssp TSEEEEEETTTTEEEEEEEC-CC---CCCCCEEEEE----------ECSSTTEEEEEEEETTEEEEEEEETTTCCEE---
T ss_pred CCcEEEEECCCCceeEEEec-cccccccCCccceEE----------ECCCCCEEEEEecCCCCceEEEEECCCCccc---
Confidence 99999999998743322111 0000 011122222 23555556666678 99999999876432
Q ss_pred cccccCCCCCCCccc-ccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeec
Q psy12356 205 SKFFEEPEDPTNKSF-FSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 205 ~~~~~~~~~~~~~~~-~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~ 263 (400)
..+..+..+..... ...|...|.+++|+|++++|+++ .|++|+|||++++ .++..+.
T Consensus 272 -~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~ 330 (397)
T 1sq9_A 272 -GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLN 330 (397)
T ss_dssp -EEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEE
T ss_pred -ceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-ceeEEEe
Confidence 22221100000000 00177899999999999999975 6899999999986 4678887
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-23 Score=204.50 Aligned_cols=271 Identities=11% Similarity=0.136 Sum_probs=187.4
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+ +++|++|+.||+|++||+.++ +.+.++.+|.. .|.+++|++ .
T Consensus 160 ~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~-----------~~~~~~~~h~~------------~v~~~~~~~----~ 210 (445)
T 2ovr_B 160 GGVWSSQMR--DNIIISGSTDRTLKVWNAETG-----------ECIHTLYGHTS------------TVRCMHLHE----K 210 (445)
T ss_dssp SCEEEEEEE--TTEEEEEETTSCEEEEETTTT-----------EEEEEECCCSS------------CEEEEEEET----T
T ss_pred CCEEEEEec--CCEEEEEeCCCeEEEEECCcC-----------cEEEEECCCCC------------cEEEEEecC----C
Confidence 457899997 679999999999999999753 34567888874 488999963 2
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|++|++||+.+++. ..|...|.+++| + ++++++++.|++|++||++++........+ ...+
T Consensus 211 ~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~v 282 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--D-GRRVVSGAYDFMVKVWDPETETCLHTLQGH-----TNRV 282 (445)
T ss_dssp EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--C-SSCEEEEETTSCEEEEEGGGTEEEEEECCC-----SSCE
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--C-CCEEEEEcCCCEEEEEECCCCcEeEEecCC-----CCce
Confidence 688899999999999998763 456778999999 3 367999999999999999988433211100 0011
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+.+ ++...++++.||.|++||++++... .. +.+|...+.++.+ ++++|
T Consensus 283 ~~~~~------------~~~~l~~~~~d~~i~i~d~~~~~~~----~~------------~~~~~~~v~~~~~--~~~~l 332 (445)
T 2ovr_B 283 YSLQF------------DGIHVVSGSLDTSIRVWDVETGNCI----HT------------LTGHQSLTSGMEL--KDNIL 332 (445)
T ss_dssp EEEEE------------CSSEEEEEETTSCEEEEETTTCCEE----EE------------ECCCCSCEEEEEE--ETTEE
T ss_pred EEEEE------------CCCEEEEEeCCCeEEEEECCCCCEE----EE------------EcCCcccEEEEEE--eCCEE
Confidence 11111 3334556668999999999876532 11 2356678887777 45677
Q ss_pred EE-ecCCeEEEEeCCCCCCceeeecC---CCc-----CCCCcc-cCCCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 240 IS-RDYLCVKVWDLHMESRPVETYPT---HTK-----EENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 240 as-~~D~tIklWD~~~~~~~l~~~~~---h~~-----~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
++ +.|++|++||++++ .++..+.+ |.. ..++.+ ++++.++.+++|++...+....- ......+|...
T Consensus 333 ~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~~~~~~~ 409 (445)
T 2ovr_B 333 VSGNADSTVKIWDIKTG-QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL--VTLESGGSGGV 409 (445)
T ss_dssp EEEETTSCEEEEETTTC-CEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEE--EECTTGGGTCE
T ss_pred EEEeCCCeEEEEECCCC-cEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeee--eccccCCCCce
Confidence 76 56999999999986 46788876 431 124554 45788999999998654332100 00001367888
Q ss_pred eEEEEEcCCCcEEeecccchhhccc-ccceeEEEEccCCC
Q psy12356 310 INSISVNSDQLTVEASPRGIFADAH-TYHISSTSVNSDQE 348 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~~~~~~~gh-~~~V~~i~fspDg~ 348 (400)
|++++|+|+|.++++++.. |. ...|.-+.|++|.+
T Consensus 410 v~~~~~s~~~~~la~~~~d----g~~~~~l~v~df~~~~~ 445 (445)
T 2ovr_B 410 VWRIRASNTKLVCAVGSRN----GTEETKLLVLDFDVDMK 445 (445)
T ss_dssp EEEEEECSSEEEEEEECSS----SSSCCEEEEEECCCCC-
T ss_pred EEEEEecCCEEEEEEcccC----CCCccEEEEEECCCCCC
Confidence 9999999999998866542 21 23465677777653
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-23 Score=197.26 Aligned_cols=242 Identities=14% Similarity=0.131 Sum_probs=155.2
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----c---ccccccEEEEEEecCCCC-EEEEEeCCCeEEEEec-c
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----M---EELNEVITAAEFHPIDCN-LFVYSSSKGTIRLCDM-R 139 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~---~~~~~~V~sv~f~p~~~~-~las~s~Dg~i~lWD~-~ 139 (400)
+.|.+++|+|+++ .+++++.|++|+|||+.++. . ..|...|++++|+|+ ++ +|++++.|+.|++||+ .
T Consensus 12 ~~v~~~~~s~~~~--~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 12 DYISDIKIIPSKS--LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp SCEEEEEEEGGGT--EEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEEEECSSS
T ss_pred CcEEEEEEcCCCC--EEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEEEEEecc
Confidence 4599999999874 67788999999999998776 2 346678999999998 47 8999999999999999 7
Q ss_pred cccccccccceeccC-cccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccc---------ccccCccccccc
Q psy12356 140 AAALCDRHSKCLIEG-TNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRA---------AALCDRHSKFFE 209 (400)
Q Consensus 140 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~---------~~~~~~~~~~~~ 209 (400)
++.... +... -...+..+.+ .+ +...++++.|+.|++||++. +... ..
T Consensus 89 ~~~~~~-----~~~~~~~~~v~~l~~----------~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----~~-- 146 (342)
T 1yfq_A 89 SPSFQA-----LTNNEANLGICRICK----------YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS----NN-- 146 (342)
T ss_dssp SSSEEE-----CBSCCCCSCEEEEEE----------ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS----SS--
T ss_pred CCceEe-----ccccCCCCceEEEEe----------CC-CCEEEEEcCCCeEEEEcccccccccccccCCee----eE--
Confidence 763210 1110 0011222222 23 44455566899999999986 3211 11
Q ss_pred CCCCCCCcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCC-CCCceee-ecCCC-------cCC-CCccc-CCCC
Q psy12356 210 EPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHM-ESRPVET-YPTHT-------KEE-NGQLR-DPSN 278 (400)
Q Consensus 210 ~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~-~~~~l~~-~~~h~-------~~~-~g~~~-~~~~ 278 (400)
+ .|...|.+++|+|++ +++++.|++|++||+++ +..+... ...|. +.+ +|+++ +++.
T Consensus 147 ----------~-~~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 147 ----------T-KVKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp ----------S-SSCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred ----------E-eeCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 1 256789999999998 44456799999999997 5432222 22232 344 55543 3455
Q ss_pred CceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCe
Q psy12356 279 ITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLR 357 (400)
Q Consensus 279 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~ 357 (400)
++.+++|++..............+ .+|.. .....+|...|++++|+|||++|+++ .|++
T Consensus 215 dg~i~i~~~~~~~~~~~~~~~~~~-~~~~~-------------------~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 274 (342)
T 1yfq_A 215 DGRVAVEFFDDQGDDYNSSKRFAF-RCHRL-------------------NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI 274 (342)
T ss_dssp TSEEEEEECCTTCCSTTCTTCEEE-ECCCC-------------------CTTCCSSCCCEEEEEECTTTCCEEEEETTSC
T ss_pred CCcEEEEEEcCCCcccccccceee-ecccc-------------------cccccccceeEEEEEEcCCCCEEEEecCCce
Confidence 566666655322000000000000 01100 00012466799999999999999997 6999
Q ss_pred EEEEeCccCC
Q psy12356 358 INLWHLEITD 367 (400)
Q Consensus 358 i~lW~~~~~~ 367 (400)
|++||+...+
T Consensus 275 i~vwd~~~~~ 284 (342)
T 1yfq_A 275 ISCWNLQTRK 284 (342)
T ss_dssp EEEEETTTTE
T ss_pred EEEEcCccHh
Confidence 9999998644
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-22 Score=196.29 Aligned_cols=265 Identities=9% Similarity=0.089 Sum_probs=166.5
Q ss_pred CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE-EeeCCCe
Q psy12356 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL-LSTNDQS 93 (400)
Q Consensus 15 G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l-~ss~D~t 93 (400)
+.++++++.|++|++||+.++ +++..+.+|. .+.+++|+|++. .++ +++.|++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~-----------~~~~~~~~~~-------------~~~~~~~s~dg~--~l~~~~~~d~~ 55 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSN-----------KVTATIPVGS-------------NPMGAVISPDGT--KVYVANAHSND 55 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTT-----------EEEEEEECSS-------------SEEEEEECTTSS--EEEEEEGGGTE
T ss_pred CEEEEEcCCCCEEEEEECCCC-----------eEEEEeecCC-------------CcceEEECCCCC--EEEEECCCCCe
Confidence 357889999999999999753 3455666664 378999999874 454 4568999
Q ss_pred EEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhh
Q psy12356 94 FNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKRE 170 (400)
Q Consensus 94 I~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (400)
|++||+.++++. .+...+.+++|+|++..++++++.|++|++||+.+++...... . ......+.+
T Consensus 56 i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~----~--~~~~~~~~~------ 123 (391)
T 1l0q_A 56 VSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK----T--GKSPLGLAL------ 123 (391)
T ss_dssp EEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----C--SSSEEEEEE------
T ss_pred EEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe----C--CCCcceEEE------
Confidence 999999888732 2234789999999875455666678999999999885422110 0 011122222
Q ss_pred hhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE-Ee-cCCeE
Q psy12356 171 ERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI-SR-DYLCV 247 (400)
Q Consensus 171 ~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la-s~-~D~tI 247 (400)
.+++. ..++++.++.|++||+++++.. ..+ ..| ..+.+++|+|+|++|+ ++ .|++|
T Consensus 124 ----s~dg~~l~~~~~~~~~v~~~d~~~~~~~----~~~------------~~~-~~~~~~~~~~dg~~l~~~~~~~~~v 182 (391)
T 1l0q_A 124 ----SPDGKKLYVTNNGDKTVSVINTVTKAVI----NTV------------SVG-RSPKGIAVTPDGTKVYVANFDSMSI 182 (391)
T ss_dssp ----CTTSSEEEEEETTTTEEEEEETTTTEEE----EEE------------ECC-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred ----CCCCCEEEEEeCCCCEEEEEECCCCcEE----EEE------------ecC-CCcceEEECCCCCEEEEEeCCCCEE
Confidence 34543 3355677999999999876532 111 112 4578999999999874 54 57999
Q ss_pred EEEeCCCCCCceeeecCCC------cCCCCccc-CCC---CCceeecCcccccceeeccCccceeccccccceEEEEEcC
Q psy12356 248 KVWDLHMESRPVETYPTHT------KEENGQLR-DPS---NITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNS 317 (400)
Q Consensus 248 klWD~~~~~~~l~~~~~h~------~~~~g~~~-~~~---~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~ 317 (400)
++||++++ .++..+..+. +.++|+++ .++ .++.+++|++..
T Consensus 183 ~~~d~~~~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~---------------------------- 233 (391)
T 1l0q_A 183 SVIDTVTN-SVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT---------------------------- 233 (391)
T ss_dssp EEEETTTT-EEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT----------------------------
T ss_pred EEEECCCC-eEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC----------------------------
Confidence 99999975 3444443221 12222211 100 122222222110
Q ss_pred CCcEEeecccchhhcccccceeEEEEccCCCEE-EEe-cCCeEEEEeCccCCeeEEEEeec
Q psy12356 318 DQLTVEASPRGIFADAHTYHISSTSVNSDQETY-LSA-DDLRINLWHLEITDQSFNIVDIK 376 (400)
Q Consensus 318 dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~l-as~-~D~~i~lW~~~~~~~~~~~~~~~ 376 (400)
++.+ ..+ ..|. .+.+++|+|||++| +++ .|++|++||+.+.+ ....+...
T Consensus 234 -~~~~-----~~~-~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~-~~~~~~~~ 285 (391)
T 1l0q_A 234 -NKIT-----ARI-PVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT-ITATMAVG 285 (391)
T ss_dssp -TEEE-----EEE-ECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEECS
T ss_pred -CeEE-----EEE-ecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCc-EEEEEECC
Confidence 0000 000 1333 47899999999987 565 69999999998643 45555443
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-24 Score=205.57 Aligned_cols=236 Identities=17% Similarity=0.187 Sum_probs=163.5
Q ss_pred CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe-ccCCceEEEeeCCCeEEEEEccCC
Q psy12356 24 GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR-RKNQAHFLLSTNDQSFNIVDIKPT 102 (400)
Q Consensus 24 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp-~~~~~~~l~ss~D~tI~lWd~~~~ 102 (400)
+++++||+.+... ....+.+|. +.|++++|+| +++ .+++++.|++|+|||+.++
T Consensus 22 ~~~~~v~~~~~~~-----------~~~~~~~h~------------~~v~~~~~s~~~~~--~l~~~~~dg~i~iw~~~~~ 76 (408)
T 4a11_B 22 ESTRRVLGLELNK-----------DRDVERIHG------------GGINTLDIEPVEGR--YMLSGGSDGVIVLYDLENS 76 (408)
T ss_dssp HHHHHHHTEEECT-----------TEEECCCCS------------SCEEEEEECTTTCC--EEEEEETTSCEEEEECCCC
T ss_pred cCcceeeccccCc-----------ceeeeeccC------------CcEEEEEEecCCCC--EEEEEcCCCeEEEEECCCC
Confidence 4557777765321 234566786 4599999999 764 6777899999999999877
Q ss_pred Cc----c-------------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceecc
Q psy12356 103 NM----E-------------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVP 165 (400)
Q Consensus 103 ~~----~-------------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (400)
.. . .|...|.+++|+|+++++|++++.|++|++||++++....... . ......+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-----~-~~~~~~~~~~ 150 (408)
T 4a11_B 77 SRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-----F-EETVYSHHMS 150 (408)
T ss_dssp SSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-----C-SSCEEEEEEC
T ss_pred cccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-----C-CCceeeeEee
Confidence 52 1 2667899999999667899999999999999999885322110 0 0011111111
Q ss_pred CchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc-EEEE-ec
Q psy12356 166 ESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR-YMIS-RD 243 (400)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~-~las-~~ 243 (400)
+ ..++....+.++.||.|++||++++... .. +.+|...|.+++|+|+++ ++++ +.
T Consensus 151 ~-------~~~~~~~~~~~~~~~~v~~~d~~~~~~~----~~------------~~~~~~~v~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 151 P-------VSTKHCLVAVGTRGPKVQLCDLKSGSCS----HI------------LQGHRQEILAVSWSPRYDYILATASA 207 (408)
T ss_dssp S-------SCSSCCEEEEEESSSSEEEEESSSSCCC----EE------------ECCCCSCEEEEEECSSCTTEEEEEET
T ss_pred c-------CCCCCcEEEEEcCCCeEEEEeCCCccee----ee------------ecCCCCcEEEEEECCCCCcEEEEEcC
Confidence 0 1123334556678999999999875431 11 346778999999999998 4665 57
Q ss_pred CCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEe
Q psy12356 244 YLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVE 323 (400)
Q Consensus 244 D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~ 323 (400)
|++|++||++++..++..+..|..... . . .
T Consensus 208 dg~i~i~d~~~~~~~~~~~~~~~~~~~-----------~--------------~------~------------------- 237 (408)
T 4a11_B 208 DSRVKLWDVRRASGCLITLDQHNGKKS-----------Q--------------A------V------------------- 237 (408)
T ss_dssp TSCEEEEETTCSSCCSEECCTTTTCSC-----------C--------------C------T-------------------
T ss_pred CCcEEEEECCCCCcccccccccccccc-----------e--------------e------e-------------------
Confidence 899999999987656666544321000 0 0 0
Q ss_pred ecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 324 ASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 324 ~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
.....+|...|.+++|+|||++|+++ .|+.|++||+...+
T Consensus 238 ----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 238 ----ESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp ----TTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred ----ccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 00113688899999999999999997 69999999998644
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-24 Score=208.47 Aligned_cols=210 Identities=10% Similarity=-0.001 Sum_probs=134.8
Q ss_pred eeEEEEEECC--------CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEE
Q psy12356 4 YMREASQRFS--------DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 75 (400)
Q Consensus 4 ~~v~~v~fsp--------dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~ 75 (400)
+.|++|+|+| ||++|||||.|++|+|||+.+.. ....+.+|. ..|.+|+
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-----------~~~~~~~~~------------~~v~~v~ 193 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-----------PILAGYPLS------------SPGISVQ 193 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-----------EEEEEEECS------------SCEEEEE
T ss_pred CceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-----------eeeeecCCC------------CCcEEEE
Confidence 4699999998 99999999999999999987531 233445555 3489999
Q ss_pred EEeccCCceEEEeeCCCeEEEEEccCCCcc-----------------------------cccccEEEEEEecCCCCEEEE
Q psy12356 76 WLRRKNQAHFLLSTNDQSFNIVDIKPTNME-----------------------------ELNEVITAAEFHPIDCNLFVY 126 (400)
Q Consensus 76 ~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~-----------------------------~~~~~V~sv~f~p~~~~~las 126 (400)
|+|++. ..+++++.|++|+|||+.+++.. .+...|.++.|++.++..+++
T Consensus 194 ~~p~~~-~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s 272 (393)
T 4gq1_A 194 FRPSNP-NQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILA 272 (393)
T ss_dssp EETTEE-EEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEE
T ss_pred ECCCCC-ceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEE
Confidence 999752 35667889999999999876410 123457788987434588999
Q ss_pred EeCCCeEEEEecccccccccccce---eccCcc-cceeceeccCchhhhhh-cccCcceeecCCCCCeEEEeeccccccc
Q psy12356 127 SSSKGTIRLCDMRAAALCDRHSKC---LIEGTN-CNCQGLIVPESKREERQ-SSQNRREKEDNRRKPAIRLCDMRAAALC 201 (400)
Q Consensus 127 ~s~Dg~i~lWD~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dg~i~lWD~~~~~~~ 201 (400)
++.|+++++||++.+........+ +..... ................. ...++...++++.||+|+|||+.++...
T Consensus 273 ~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 273 MCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp ECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred EeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 999999999999887432211100 000000 00000000000000001 1124455677789999999999876432
Q ss_pred CcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCC
Q psy12356 202 DRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLH 253 (400)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~ 253 (400)
. . +.+|..+|.+|+|||||++||++.++.+.||.+.
T Consensus 353 ~----~------------~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 353 S----I------------PIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp E----E------------EEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred E----E------------ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 1 1 2356789999999999999998877778888765
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-22 Score=191.97 Aligned_cols=224 Identities=12% Similarity=0.071 Sum_probs=150.0
Q ss_pred eeEEEEEECC--CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFS--DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fsp--dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
..|.+++|+| ||++||+|+.||+|+|||+..+.... .....+....+.+|. ..|.+++|+|+.+
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~--~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~ 123 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEEC--SGRRWNKLCTLNDSK------------GSLYSVKFAPAHL 123 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTT--SSCSEEEEEEECCCS------------SCEEEEEECCGGG
T ss_pred CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccc--cccCcceeeeecccC------------CceeEEEEcCCCC
Confidence 4689999999 69999999999999999998643110 001123455677776 4599999999822
Q ss_pred CceEEEeeCCCeEEEEEccCCCcc-----------------cccccEEEEEEecC--CCCEEEEEeCCCeEEEEeccccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTNME-----------------ELNEVITAAEFHPI--DCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~~~-----------------~~~~~V~sv~f~p~--~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
+..+++++.|++|++||+++++.. .+...+.+++|+|+ ++.++++++.|+.+.+|+...+.
T Consensus 124 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 203 (351)
T 3f3f_A 124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK 203 (351)
T ss_dssp CSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC
T ss_pred CcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc
Confidence 236778899999999999876521 23456899999997 35789999999999888877763
Q ss_pred ccccccceeccCcc--cceeceeccCchhhhhhcccCc----ceeecCCCCCeEEEeecccccccCcccccc--------
Q psy12356 143 LCDRHSKCLIEGTN--CNCQGLIVPESKREERQSSQNR----REKEDNRRKPAIRLCDMRAAALCDRHSKFF-------- 208 (400)
Q Consensus 143 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~-------- 208 (400)
.. .+..+.. ..+..+.+ .+++ ...++++.||.|++||++.+..........
T Consensus 204 ~~-----~~~~~~~h~~~i~~~~~----------~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 268 (351)
T 3f3f_A 204 LH-----VAAKLPGHKSLIRSISW----------APSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDN 268 (351)
T ss_dssp EE-----EEEECCCCCSCEEEEEE----------CCCSSCSSEEEEEEETTSCEEEEEEEECC-----------------
T ss_pred ee-----eeeecCCCCcceeEEEE----------CCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCC
Confidence 21 1111111 11222222 3554 456677789999999998742210000000
Q ss_pred --------------------cCCC--CCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCC
Q psy12356 209 --------------------EEPE--DPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMES 256 (400)
Q Consensus 209 --------------------~~~~--~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~ 256 (400)
.... .......+.+|...|.+++|+|+|++|+++ .|++|+|||+.++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 269 SADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp ----------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred CcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 0000 000011145788999999999999999975 69999999999864
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-22 Score=193.19 Aligned_cols=245 Identities=9% Similarity=0.088 Sum_probs=155.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|+|++||+|+.||+|+|||+.+.+ .. .+.+|. ..|.+++|+|..++.
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------~~-~~~~~~------------~~v~~~~~~~~~~~~ 142 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ-----------AI-QIAQHD------------APVKTIHWIKAPNYS 142 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----------EE-EEEECS------------SCEEEEEEEECSSCE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC-----------ce-eecccc------------CceEEEEEEeCCCCC
Confidence 468999999999999999999999999998532 22 345565 459999994433233
Q ss_pred eEEEeeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
.+++++.|++|++||+++++.. .....+.++.+.+ ..++.++.|+.+++||++....... ...........
T Consensus 143 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~ 216 (368)
T 3mmy_A 143 CVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY---PMAVVATAERGLIVYQLENQPSEFR---RIESPLKHQHR 216 (368)
T ss_dssp EEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET---TEEEEEEGGGCEEEEECSSSCEEEE---ECCCSCSSCEE
T ss_pred EEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC---CeeEEEeCCCcEEEEEeccccchhh---hccccccCCCc
Confidence 5777889999999999887632 1234566777765 3678889999999999987632110 00000000000
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
...+... ....+++ .++++.||.|++||++..... .....+..+..........+|...|.+++|+|+|++|+
T Consensus 217 ~~~~~~~----~~~~~~~--~~~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 289 (368)
T 3mmy_A 217 CVAIFKD----KQNKPTG--FALGSIEGRVAIHYINPPNPA-KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLA 289 (368)
T ss_dssp EEEEEEC----TTSCEEE--EEEEETTSEEEEEESSCSCHH-HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEE
T ss_pred eEEEccc----CCCCCCe--EEEecCCCcEEEEecCCCCcc-ccceeeeeeecccccccccccccceEEEEEecCCCEEE
Confidence 0000000 0001112 445567999999999875320 11112221110000001123445899999999999998
Q ss_pred Ee-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCC
Q psy12356 241 SR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQ 319 (400)
Q Consensus 241 s~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg 319 (400)
++ .|++|+|||++++ .++..+.+ |...|.+++|+|||
T Consensus 290 s~~~dg~i~iwd~~~~-~~~~~~~~-----------------------------------------~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 290 TVGSDGRFSFWDKDAR-TKLKTSEQ-----------------------------------------LDQPISACCFNHNG 327 (368)
T ss_dssp EEETTSCEEEEETTTT-EEEEECCC-----------------------------------------CSSCEEEEEECTTS
T ss_pred EEccCCeEEEEECCCC-cEEEEecC-----------------------------------------CCCCceEEEECCCC
Confidence 75 6999999999975 34554433 44457899999999
Q ss_pred cEEeeccc
Q psy12356 320 LTVEASPR 327 (400)
Q Consensus 320 ~~~~~~~~ 327 (400)
++|++++.
T Consensus 328 ~~l~~~s~ 335 (368)
T 3mmy_A 328 NIFAYASS 335 (368)
T ss_dssp SCEEEEEC
T ss_pred CeEEEEec
Confidence 98876553
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-22 Score=198.13 Aligned_cols=206 Identities=12% Similarity=0.096 Sum_probs=140.9
Q ss_pred eEEEEEECCCCCeE-EEecCCCeEEEEEcC--CCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELL-ATGDKGGRVVIFQRD--PLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~L-as~s~Dg~I~iwd~~--~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.|++++|+|||++| |+|+.||+|+|||+. ++. .++.+..|.. ...|.+++|+|++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~-----------~~~~~~~~~~----------~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN-----------VLKLRKRFCF----------SKRPNAISIAEDDT 162 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS-----------CEEEEEEEEC----------SSCEEEEEECTTSS
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc-----------eeeeeecccC----------CCCceEEEEcCCCC
Confidence 59999999999996 999999999999997 432 2445543321 14589999999874
Q ss_pred CceEEEeeCCCeEEEEEccCCCc--------ccccccEEEEEEecC--CCCEEEEEeCCCeEEEEeccccccccccccee
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTNM--------EELNEVITAAEFHPI--DCNLFVYSSSKGTIRLCDMRAAALCDRHSKCL 151 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~~--------~~~~~~V~sv~f~p~--~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~ 151 (400)
.+++++.|+.|++||+.++.. ..|...|++++|+|+ ++.+|++++.|++|++||++++...... .
T Consensus 163 --~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~---~ 237 (450)
T 2vdu_B 163 --TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW---L 237 (450)
T ss_dssp --EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE---C
T ss_pred --EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee---e
Confidence 777788999999999976652 346678999999997 1378999999999999999987432210 0
Q ss_pred ccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCC---------C-CC---Ccc
Q psy12356 152 IEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPE---------D-PT---NKS 218 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~---------~-~~---~~~ 218 (400)
... ...+..+ .++ ++...++++.|++|++||++++.... .+..+. . +. ...
T Consensus 238 ~~h-~~~v~~~----------~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 238 FGH-KHFVSSI----------CCG-KDYLLLSAGGDDKIFAWDWKTGKNLS----TFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp CCC-SSCEEEE----------EEC-STTEEEEEESSSEEEEEETTTCCEEE----EEECHHHHGGGCCTTSBC-------
T ss_pred cCC-CCceEEE----------EEC-CCCEEEEEeCCCeEEEEECCCCcEee----eecchhhhhhhhhhccccccccccc
Confidence 000 0111122 223 44455666789999999998865421 111000 0 00 000
Q ss_pred cccccccCeEEEEECCCCcEEEE-e-cCCeEEEEeC
Q psy12356 219 FFSEIISSISDVKISNSGRYMIS-R-DYLCVKVWDL 252 (400)
Q Consensus 219 ~~~~h~~~V~~v~fSpdg~~las-~-~D~tIklWD~ 252 (400)
.-..+...|.+++|+|++++|++ + .|++|+|||+
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 00012356899999999999986 4 6899999999
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.4e-23 Score=219.21 Aligned_cols=208 Identities=13% Similarity=0.151 Sum_probs=150.4
Q ss_pred eeEEEEEECCC--CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSD--GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspd--G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
..|++++|+|+ |++||+|+.||+|+|||+.++ .......+.+|. ..|.+++|+|+..
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~---------~~~~~~~~~~h~------------~~V~~v~~sp~~~ 112 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG---------RWSQIAVHAVHS------------ASVNSVQWAPHEY 112 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT---------EEEEEEEECCCS------------SCEEEEEECCGGG
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC---------cccccccccCCC------------CCeEEEEECCCCC
Confidence 46899999998 999999999999999999753 222455667776 4599999999832
Q ss_pred CceEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecC------------CCCEEEEEeCCCeEEEEecccccc
Q psy12356 82 QAHFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPI------------DCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 82 ~~~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~------------~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
+..+++++.|++|++||+.++. ...|...|++++|+|. ++.++++++.||+|++||++++..
T Consensus 113 ~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~ 192 (753)
T 3jro_A 113 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 192 (753)
T ss_dssp CSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT
T ss_pred CCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc
Confidence 2377888999999999998773 2346678999999994 257899999999999999988732
Q ss_pred cccccceeccCc--ccceeceeccCchhhhhhcccC---cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcc
Q psy12356 144 CDRHSKCLIEGT--NCNCQGLIVPESKREERQSSQN---RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKS 218 (400)
Q Consensus 144 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 218 (400)
.. ....... ...+..+. .+|+ +...++++.||.|++||++.+..... ... .
T Consensus 193 ~~---~~~~~~~~h~~~V~~l~----------~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~--~~~---------~ 248 (753)
T 3jro_A 193 TY---VLESTLEGHSDWVRDVA----------WSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK--KTL---------L 248 (753)
T ss_dssp EE---EEEEEECCCSSCEEEEE----------ECCCCSSSEEEEEEESSSCEEEEEESSSSSCCB--CCB---------S
T ss_pred cc---eeeeeecCCCCcEEEEE----------eccCCCCCCEEEEEecCCEEEEecCCCCCCcce--eEE---------e
Confidence 10 0111111 01122222 2355 56667777899999999987532100 000 0
Q ss_pred cccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCC
Q psy12356 219 FFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMES 256 (400)
Q Consensus 219 ~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~ 256 (400)
...+|...|.+++|+|+|++|+++ .|++|++||+..+.
T Consensus 249 ~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 249 KEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp SSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred ccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 022577889999999999999874 69999999999654
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.1e-22 Score=201.90 Aligned_cols=314 Identities=10% Similarity=0.046 Sum_probs=200.1
Q ss_pred EECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeee-ccCcchhhcccccccceeeEEEEEeccCCceEEEe
Q psy12356 10 QRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLS 88 (400)
Q Consensus 10 ~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~s 88 (400)
+|+|+|.++++++.|++|.+||..++ +++.++. +|. +..++|+|++. .++++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~-----------~~~~~i~~g~~--------------~~~v~~spdg~--~l~v~ 196 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSK-----------KIVKVIDTGYA--------------VHISRMSASGR--YLLVI 196 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTC-----------CEEEEEECSTT--------------EEEEEECTTSC--EEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCc-----------eEEEEEecCcc--------------cceEEECCCCC--EEEEE
Confidence 48999999999999999999998754 3455666 332 66899999874 66678
Q ss_pred eCCCeEEEEEc--cCCCcc---cccccEEEEEEec----CCCCEEEEEe-CCCeEEEEecccccccccccceeccCcccc
Q psy12356 89 TNDQSFNIVDI--KPTNME---ELNEVITAAEFHP----IDCNLFVYSS-SKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 89 s~D~tI~lWd~--~~~~~~---~~~~~V~sv~f~p----~~~~~las~s-~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
+.|++|++||+ .++++. .+.....+++|+| ++ +++++++ .+++|++||..+.+.+.... .. ...
T Consensus 197 ~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i~----~~-g~~ 270 (543)
T 1nir_A 197 GRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIVS----TR-GMT 270 (543)
T ss_dssp ETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEEE----CC-EEC
T ss_pred CCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceeec----cc-Ccc
Confidence 88999999999 666531 1234578999999 86 5666666 48999999998875432110 00 000
Q ss_pred eeceec-cCchhhhhhcccC-cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 159 CQGLIV-PESKREERQSSQN-RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 159 ~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
.....+ ++.....+..+++ ...+++...++.|.+||+.+.+... ... + .+...+..++|+|||
T Consensus 271 ~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~--~~~------------i-~~~~~~~~~~~spdg 335 (543)
T 1nir_A 271 VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT--VTS------------I-GAAPFLHDGGWDSSH 335 (543)
T ss_dssp SSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE--EEE------------E-ECCSSCCCEEECTTS
T ss_pred cCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce--eEE------------e-ccCcCccCceECCCC
Confidence 000000 0000011222333 3445566689999999998653211 000 1 233457789999999
Q ss_pred cEEE-Ee-cCCeEEEEeCCCCCCceeeecC----CC------cCCC-Cccc-CC-CCCceeecCccccccee-eccCccc
Q psy12356 237 RYMI-SR-DYLCVKVWDLHMESRPVETYPT----HT------KEEN-GQLR-DP-SNITALRVPQIKPIELT-VEASPRR 300 (400)
Q Consensus 237 ~~la-s~-~D~tIklWD~~~~~~~l~~~~~----h~------~~~~-g~~~-~~-~~~~~i~l~~~~~~~~~-~~~~~~~ 300 (400)
++++ +. .+++|++||+.++ ++++.+.. |. ..++ |++. ++ ..+.+|++|+..+...- ......+
T Consensus 336 ~~l~va~~~~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~ 414 (543)
T 1nir_A 336 RYFMTAANNSNKVAVIDSKDR-RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVA 414 (543)
T ss_dssp CEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred CEEEEEecCCCeEEEEECCCC-eEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEE
Confidence 9765 44 4799999999986 46666653 52 1355 4443 33 35688999987651100 0011112
Q ss_pred eeccccccceEEEEEcCCCcEEeecc--------c------------chhh----------cccccceeEEEEccCCCEE
Q psy12356 301 IFANAHTYHINSISVNSDQLTVEASP--------R------------GIFA----------DAHTYHISSTSVNSDQETY 350 (400)
Q Consensus 301 ~~~~~~~~~i~~i~~s~dg~~~~~~~--------~------------~~~~----------~gh~~~V~~i~fspDg~~l 350 (400)
.+ .+|......+.|+|||++|.... . ..+. ..|...|.++.|+|||+.|
T Consensus 415 ~l-~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~ 493 (543)
T 1nir_A 415 EL-QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEV 493 (543)
T ss_dssp EE-ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEE
T ss_pred EE-EcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEE
Confidence 22 34556678899999998876532 0 0100 2456789999999999988
Q ss_pred EEe------cCCeEEEEeCccCCeeEEEEe
Q psy12356 351 LSA------DDLRINLWHLEITDQSFNIVD 374 (400)
Q Consensus 351 as~------~D~~i~lW~~~~~~~~~~~~~ 374 (400)
+.+ .|++|.|||.++.+ +.+++.
T Consensus 494 ~~s~~~~~~~~~~i~v~D~~t~~-~~~~i~ 522 (543)
T 1nir_A 494 WFSVWNGKNDSSALVVVDDKTLK-LKAVVK 522 (543)
T ss_dssp EEEEECCTTSCCEEEEEETTTTE-EEEEEC
T ss_pred EEEeecCCCCCCeEEEEECCCce-EEEeec
Confidence 853 27899999998754 555544
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-21 Score=188.33 Aligned_cols=226 Identities=12% Similarity=0.126 Sum_probs=159.4
Q ss_pred eEEEEEECCCCCeE-EEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELL-ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~L-as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+.+++|+|||++| ++++.|++|++||+.++ +.+..+..|. .|.+++|+|+++
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-----------~~~~~~~~~~-------------~v~~~~~spdg~-- 86 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATN-----------NVIATVPAGS-------------SPQGVAVSPDGK-- 86 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-----------EEEEEEECSS-------------SEEEEEECTTSS--
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCC-----------eEEEEEECCC-------------CccceEECCCCC--
Confidence 47899999999987 68889999999999753 2344555443 388999999874
Q ss_pred eEEEe-eCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLS-TNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~s-s~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.++++ +.|++|++||+.+++.. .+...+.+++|+|++..++++++.|+.|++||+++++...... . ....
T Consensus 87 ~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~----~--~~~~ 160 (391)
T 1l0q_A 87 QVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS----V--GRSP 160 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----C--CSSE
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe----c--CCCc
Confidence 55554 56899999999987632 2334689999999864455788889999999998874322110 0 0011
Q ss_pred eceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 160 QGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
..+ ...+++. ..+++..++.|++||++++... ..+ .+...+.+++|+|+|++
T Consensus 161 ~~~----------~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~----~~~-------------~~~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 161 KGI----------AVTPDGTKVYVANFDSMSISVIDTVTNSVI----DTV-------------KVEAAPSGIAVNPEGTK 213 (391)
T ss_dssp EEE----------EECTTSSEEEEEETTTTEEEEEETTTTEEE----EEE-------------ECSSEEEEEEECTTSSE
T ss_pred ceE----------EECCCCCEEEEEeCCCCEEEEEECCCCeEE----EEE-------------ecCCCccceEECCCCCE
Confidence 122 2234543 3355667899999999876432 111 23357889999999998
Q ss_pred EEE-e---cCCeEEEEeCCCCCCceeeecCCC------cCCCCccc--CCCCCceeecCccccc
Q psy12356 239 MIS-R---DYLCVKVWDLHMESRPVETYPTHT------KEENGQLR--DPSNITALRVPQIKPI 290 (400)
Q Consensus 239 las-~---~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~~--~~~~~~~i~l~~~~~~ 290 (400)
|+. + .++.|++||++++ .++..+..|. +.++|+++ +.+.++.+++|++...
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTN-KITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTT-EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EEEEecCcCCCcEEEEECCCC-eEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 874 3 4799999999976 4667776663 46788743 4577889999987644
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=200.09 Aligned_cols=220 Identities=15% Similarity=0.157 Sum_probs=157.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++| +|++||+|+.||+|+|||+.++ +.+.++.+|.. .|.+++|++ .
T Consensus 174 ~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~-----------~~~~~~~~h~~------------~v~~l~~~~----~ 224 (435)
T 1p22_A 174 GSVLCLQY--DERVIITGSSDSTVRVWDVNTG-----------EMLNTLIHHCE------------AVLHLRFNN----G 224 (435)
T ss_dssp SCEEEEEC--CSSEEEEEETTSCEEEEESSSC-----------CEEEEECCCCS------------CEEEEECCT----T
T ss_pred CcEEEEEE--CCCEEEEEcCCCeEEEEECCCC-----------cEEEEEcCCCC------------cEEEEEEcC----C
Confidence 35788888 8999999999999999999864 24567778863 489999964 2
Q ss_pred eEEEeeCCCeEEEEEccCCCc-------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM-------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~-------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.+++++.|++|++||+.++.. ..|...|.+++|+ ++++++++.|++|++||++++........+.
T Consensus 225 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~----- 296 (435)
T 1p22_A 225 MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD---DKYIVSASGDRTIKVWNTSTCEFVRTLNGHK----- 296 (435)
T ss_dssp EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTTCCEEEEEECCS-----
T ss_pred EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCcCcEEEEEcCCC-----
Confidence 788899999999999987652 3466789999993 3689999999999999999885432211100
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
..+..+. .++...++++.||.|++||++++... .. +.+|...|.+++| ++
T Consensus 297 ~~v~~~~------------~~~~~l~~g~~dg~i~iwd~~~~~~~----~~------------~~~h~~~v~~~~~--~~ 346 (435)
T 1p22_A 297 RGIACLQ------------YRDRLVVSGSSDNTIRLWDIECGACL----RV------------LEGHEELVRCIRF--DN 346 (435)
T ss_dssp SCEEEEE------------EETTEEEEEETTSCEEEEETTTCCEE----EE------------ECCCSSCEEEEEC--CS
T ss_pred CcEEEEE------------eCCCEEEEEeCCCeEEEEECCCCCEE----EE------------EeCCcCcEEEEEe--cC
Confidence 0011111 12234555668999999999976532 11 3467789999999 78
Q ss_pred cEEEEe-cCCeEEEEeCCCCCC--------ceeeecCCCcC-----CCCcc-cCCCCCceeecCccccc
Q psy12356 237 RYMISR-DYLCVKVWDLHMESR--------PVETYPTHTKE-----ENGQL-RDPSNITALRVPQIKPI 290 (400)
Q Consensus 237 ~~las~-~D~tIklWD~~~~~~--------~l~~~~~h~~~-----~~g~~-~~~~~~~~i~l~~~~~~ 290 (400)
++|+++ .|++|++||++++.. ++..+.+|... .++.+ ++++.+++|++|++...
T Consensus 347 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC----
T ss_pred CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCC
Confidence 888864 699999999976531 57778888521 24554 45788899999987543
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-22 Score=191.68 Aligned_cols=215 Identities=9% Similarity=0.106 Sum_probs=150.1
Q ss_pred eEEEeeCCCeEEEEEccCCCcc-cc-cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceec
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME-EL-NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQG 161 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~-~~-~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
.+++++.|++|+|||+++++.. .. ...|.++.|+|. +++++.|++|++|+....
T Consensus 50 ~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~-------------------- 105 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA----IISRGPCNRLLLLYPGNQ-------------------- 105 (343)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS----EEEECSTTEEEEEETTTE--------------------
T ss_pred EEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc----eEEecCCCeEEEEEccCc--------------------
Confidence 6777899999999999888732 11 345777888885 899999999999997543
Q ss_pred eeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC--CCcEE
Q psy12356 162 LIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN--SGRYM 239 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp--dg~~l 239 (400)
+.+||+.++... +.+ ..+|...|.+++|+| +++++
T Consensus 106 ----------------------------~~~~~~~~~~~~----~~~-----------~~~~~~~v~~~~~~~~~~~~~l 142 (343)
T 3lrv_A 106 ----------------------------ITILDSKTNKVL----REI-----------EVDSANEIIYMYGHNEVNTEYF 142 (343)
T ss_dssp ----------------------------EEEEETTTCCEE----EEE-----------ECCCSSCEEEEECCC---CCEE
T ss_pred ----------------------------eEEeecCCccee----EEe-----------ecCCCCCEEEEEcCCCCCCCEE
Confidence 345555543311 000 114567899999999 99999
Q ss_pred EE-ecCCeEEEEeCCCCCCceeeecCC-C-------cCCCCcccC-CCCCceeecCcccccceeeccCccceeccccccc
Q psy12356 240 IS-RDYLCVKVWDLHMESRPVETYPTH-T-------KEENGQLRD-PSNITALRVPQIKPIELTVEASPRRIFANAHTYH 309 (400)
Q Consensus 240 as-~~D~tIklWD~~~~~~~l~~~~~h-~-------~~~~g~~~~-~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (400)
++ +.|++|++||++++. ++..+..| . +.|+|.+++ ++.+++|++|++...+.. ...+..+|...
T Consensus 143 ~s~s~dg~i~~wd~~~~~-~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~-----~~~~~~~h~~~ 216 (343)
T 3lrv_A 143 IWADNRGTIGFQSYEDDS-QYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA-----SSRFPVDEEAK 216 (343)
T ss_dssp EEEETTCCEEEEESSSSC-EEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC-----CEECCCCTTSC
T ss_pred EEEeCCCcEEEEECCCCc-EEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC-----ccEEeccCCCC
Confidence 96 469999999999864 45555333 1 568898764 688999999998543321 02232349999
Q ss_pred eEEEEEcCCCcEEeecccc---hh-----------h--ccccccee--EEEEccCCCEEEEe-c-CCeEEEEeCccCCee
Q psy12356 310 INSISVNSDQLTVEASPRG---IF-----------A--DAHTYHIS--STSVNSDQETYLSA-D-DLRINLWHLEITDQS 369 (400)
Q Consensus 310 i~~i~~s~dg~~~~~~~~~---~~-----------~--~gh~~~V~--~i~fspDg~~las~-~-D~~i~lW~~~~~~~~ 369 (400)
|.+++|+|||++|++.+.. +| . .+|...+. +++|+|+|++||++ . |+.|+||+++...+.
T Consensus 217 v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~ 296 (343)
T 3lrv_A 217 IKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN 296 (343)
T ss_dssp EEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCS
T ss_pred EEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccc
Confidence 9999999999998765431 11 0 12445555 59999999999995 5 999999999765544
Q ss_pred EE
Q psy12356 370 FN 371 (400)
Q Consensus 370 ~~ 371 (400)
++
T Consensus 297 ~~ 298 (343)
T 3lrv_A 297 WT 298 (343)
T ss_dssp EE
T ss_pred eE
Confidence 44
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.89 E-value=9.9e-22 Score=194.87 Aligned_cols=216 Identities=13% Similarity=0.180 Sum_probs=146.8
Q ss_pred eEEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|.+++|+|++. +|++|+.||+|+||++....... ........+.+|. ..|.+++|+|++ ..
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~----~~~~~~~~~~~h~------------~~v~~v~~~p~~-~~ 245 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEH----RVIDAKNIFTGHT------------AVVEDVAWHLLH-ES 245 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGG----GEEECSEEECCCS------------SCEEEEEECSSC-TT
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCC----ceeccceeecCCC------------CCEeeeEEeCCC-CC
Confidence 578999999998 99999999999999998642110 0111234566776 359999999954 23
Q ss_pred eEEEeeCCCeEEEEEccCCC-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc-cccccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL-CDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~-~~~~~~~~~~~~ 155 (400)
.+++++.|+.|++||++++. +..|...|++++|+|++..+|++++.||+|++||++.... +.... ..
T Consensus 246 ~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~----~h- 320 (430)
T 2xyi_A 246 LFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE----SH- 320 (430)
T ss_dssp EEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE----CC-
T ss_pred EEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee----cC-
Confidence 66678899999999998762 2356678999999998766899999999999999998421 11100 00
Q ss_pred ccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
...+..+.+ +|++ ..+++++.||.|++||++...........-.++ +.+...+.+|...|.+++|+|
T Consensus 321 ~~~v~~i~~----------sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~v~~~~~~p 388 (430)
T 2xyi_A 321 KDEIFQVQW----------SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP--PELLFIHGGHTAKISDFSWNP 388 (430)
T ss_dssp SSCEEEEEE----------CSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCC--TTEEEECCCCSSCEEEEEECS
T ss_pred CCCEEEEEE----------CCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCC--cceEEEcCCCCCCceEEEECC
Confidence 111222222 3444 346666789999999998632110000000000 001112347888999999999
Q ss_pred CCc-EEEE-ecCCeEEEEeCCC
Q psy12356 235 SGR-YMIS-RDYLCVKVWDLHM 254 (400)
Q Consensus 235 dg~-~las-~~D~tIklWD~~~ 254 (400)
+++ +|++ +.|++|+||++..
T Consensus 389 ~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 389 NEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp SSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCEEEEEECCCCEEEeEccc
Confidence 999 7776 5689999999985
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=189.32 Aligned_cols=214 Identities=11% Similarity=0.098 Sum_probs=134.0
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCcc--cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNME--ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~--~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~ 146 (400)
..|.+|+|+|++. +++++.+..++|||++++... .....+..+++.+++..++++++.|++|++||+++++....
T Consensus 20 ~~V~~v~fs~dg~---~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 20 NPVTDYEFNQDQS---CLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp CCCCEEEECTTSS---EEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred CceEEEEECCCCC---EEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence 4599999999873 555444556899999876531 11224667888887544446677899999999998854321
Q ss_pred ccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccc-cccCcccccccCCCCCCCccccccccc
Q psy12356 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAA-ALCDRHSKFFEEPEDPTNKSFFSEIIS 225 (400)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~ 225 (400)
.. . ...+..+. ..++....+ .|+.|++||+++. +.. ..+ ..
T Consensus 97 ~~-----~-~~~v~~v~----------~~~~~~~~~---~~~~i~i~d~~~~~~~~----~~~------------~~--- 138 (355)
T 3vu4_A 97 IK-----V-DAPVKDLF----------LSREFIVVS---YGDVISVFKFGNPWKRI----TDD------------IR--- 138 (355)
T ss_dssp EE-----C-SSCEEEEE----------ECSSEEEEE---ETTEEEEEESSTTCCBS----SCC------------EE---
T ss_pred EE-----C-CCceEEEE----------EcCCEEEEE---EcCEEEEEECCCCceee----EEe------------cc---
Confidence 10 0 00111111 223443333 3789999999875 221 111 11
Q ss_pred CeEEEEECCCCcEEE-E-e-cCCeEEEEeCCCCCCc---------------eeeecCCCcCCCCcccCCCCCceeecCcc
Q psy12356 226 SISDVKISNSGRYMI-S-R-DYLCVKVWDLHMESRP---------------VETYPTHTKEENGQLRDPSNITALRVPQI 287 (400)
Q Consensus 226 ~V~~v~fSpdg~~la-s-~-~D~tIklWD~~~~~~~---------------l~~~~~h~~~~~g~~~~~~~~~~i~l~~~ 287 (400)
+...++++| .+++ + + .|++|+|||++++..+ +..+.+
T Consensus 139 ~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~----------------------- 193 (355)
T 3vu4_A 139 FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA----------------------- 193 (355)
T ss_dssp EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECC-----------------------
T ss_pred CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-----------------------
Confidence 344577888 5555 3 3 5899999999975311 233333
Q ss_pred cccceeeccCccceeccccccceEEEEEcCCCcEEeeccc-----ch-----------hhcc-cccceeEEEEccCCCEE
Q psy12356 288 KPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR-----GI-----------FADA-HTYHISSTSVNSDQETY 350 (400)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~-----~~-----------~~~g-h~~~V~~i~fspDg~~l 350 (400)
|...|++++|+|||+++++++. ++ +..| |...|++++|||||++|
T Consensus 194 ------------------h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l 255 (355)
T 3vu4_A 194 ------------------HTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKL 255 (355)
T ss_dssp ------------------CSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEE
T ss_pred ------------------cCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEE
Confidence 5555566666666665554221 11 1125 99999999999999999
Q ss_pred EEe-cCCeEEEEeCccC
Q psy12356 351 LSA-DDLRINLWHLEIT 366 (400)
Q Consensus 351 as~-~D~~i~lW~~~~~ 366 (400)
|++ .|++|+|||+...
T Consensus 256 ~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 256 AVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEETTCEEEEEESSCC
T ss_pred EEEECCCEEEEEEccCC
Confidence 997 7999999999754
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-21 Score=185.02 Aligned_cols=111 Identities=11% Similarity=0.034 Sum_probs=73.0
Q ss_pred EEEEEECC---CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 6 REASQRFS---DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 6 v~~v~fsp---dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
++.++|+| ||.+|||||.|++|||||+.++ +.+++|.+|... ...|.+++|+|++.
T Consensus 181 v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG-----------k~l~tL~g~~~~---------v~~v~~vafSpdG~- 239 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG-----------QLLKKMHIDDSY---------QASVCHKAYSEMGL- 239 (356)
T ss_dssp SCEEEEEEEETSTTEEEEEETTSEEEEEETTTC-----------CEEEEEECCC------------CCCEEEEEEETTE-
T ss_pred eeeEEeeccCCCCceEEEecCCCcEEEEECCCC-----------cEEEEEcCCCcc---------eeeeEEEEECCCCC-
Confidence 44566666 5677999999999999999864 356788765421 02477889999873
Q ss_pred ceE------------EEeeCCCeEEEEEccCCCcc---------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 83 AHF------------LLSTNDQSFNIVDIKPTNME---------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 83 ~~~------------l~ss~D~tI~lWd~~~~~~~---------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+ ++++.|++|++||.+++.+. +|...+.+..++ +.++|+++.|++|||||++++
T Consensus 240 -~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tG 315 (356)
T 2w18_A 240 -LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWDLLLG 315 (356)
T ss_dssp -EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEETTTC
T ss_pred -EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEECCCC
Confidence 33 33567899999998877631 222223333333 246788888888888888777
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-20 Score=194.00 Aligned_cols=322 Identities=9% Similarity=0.043 Sum_probs=187.0
Q ss_pred eEEEEEECCCCCeEEEecC-CC-----eEEEEEcCCCCccccCCCCcceeeeeeeccCc--chhhcc----------ccc
Q psy12356 5 MREASQRFSDGELLATGDK-GG-----RVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEP--EFDYLK----------SLE 66 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~-Dg-----~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~--~~~~~~----------~~~ 66 (400)
.|.+++|||||++||+++. |+ +|++||+.+++ ....+..|.. ....+. ...
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ-----------TRLLVDSKVVLPGTETLSDEEKARRERQRIA 106 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC-----------EEEEECGGGTC--------------------
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc-----------eeEccchhhcccccccccchhhhhhhhhhhc
Confidence 4889999999999999998 88 99999998643 1122222210 000000 000
Q ss_pred ccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCC---Ccc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 67 IEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPT---NME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 67 ~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~---~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
....|.+++|+||++ .+++++. ++|++||+.++ ... .+...+.+++|+||| +.||+++ ++.|++||+.+
T Consensus 107 ~~~~v~~~~~SpDg~--~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 107 AMTGIVDYQWSPDAQ--RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp CCEESCCCEECTTSS--EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTT
T ss_pred cccCcceeEECCCCC--EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCC
Confidence 002377899999974 5555554 99999999988 533 344679999999986 6788876 56899999988
Q ss_pred ccccccccceeccCc-ccceeceeccCchhhhhhcccCcceeecCCCCC-------------------------------
Q psy12356 141 AALCDRHSKCLIEGT-NCNCQGLIVPESKREERQSSQNRREKEDNRRKP------------------------------- 188 (400)
Q Consensus 141 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg------------------------------- 188 (400)
+.............. +...+-..-.......+..+|++..++..+.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 743211000000000 000000000000001112235543322222222
Q ss_pred --eEEEeeccc-ccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-e-----cCCeEEEEeCCCCCCce
Q psy12356 189 --AIRLCDMRA-AALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-R-----DYLCVKVWDLHMESRPV 259 (400)
Q Consensus 189 --~i~lWD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~-----~D~tIklWD~~~~~~~l 259 (400)
.|.+||+.+ +... ..... ..|...+.+++| |||++|+. + .+..|++||+.++. +.
T Consensus 262 ~~~l~~~d~~~~~~~~----~~~~~----------~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~-~~ 325 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQ----WIDLG----------KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ-QR 325 (741)
T ss_dssp EEEEEEECSSTTCCCE----EECCC----------SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC-EE
T ss_pred eeEEEEEECCCCCceE----EecCC----------CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc-eE
Confidence 778888876 5421 11000 135567999999 99999884 2 15789999999864 33
Q ss_pred eeecCC-----------CcCCCCccc-CCCCCceeecCcccccceeeccCccceeccccccceEEE-EEcCCCcEEeec-
Q psy12356 260 ETYPTH-----------TKEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSI-SVNSDQLTVEAS- 325 (400)
Q Consensus 260 ~~~~~h-----------~~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i-~~s~dg~~~~~~- 325 (400)
..+..| .++++|+++ +++.++.++||.+.... . .+.+ ..|...+.++ .|+|||+.++..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~-----~-~~~l-~~~~~~v~~~~~~s~dg~~l~~~~ 398 (741)
T 2ecf_A 326 VLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG-----K-AAAL-THGNWSVDELLAVDEKAGLAYFRA 398 (741)
T ss_dssp EEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS-----C-EEES-CCSSSCEEEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCC-----C-eeee-eecceEEEeEeEEeCCCCEEEEEE
Confidence 333221 256888864 35566777777654221 1 1222 3567778787 599999876532
Q ss_pred c------cchhh---c-------ccccceeEEEEccCCCEEEEe--cC---CeEEEEeCcc
Q psy12356 326 P------RGIFA---D-------AHTYHISSTSVNSDQETYLSA--DD---LRINLWHLEI 365 (400)
Q Consensus 326 ~------~~~~~---~-------gh~~~V~~i~fspDg~~las~--~D---~~i~lW~~~~ 365 (400)
. .++|. . .+...+.+++|||||++|+.. +. ..+.+|+.+.
T Consensus 399 ~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 399 GIESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp CSSCTTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred eCCCCceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 1 11221 0 124567899999999998863 33 3588888753
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=184.01 Aligned_cols=262 Identities=8% Similarity=0.030 Sum_probs=158.8
Q ss_pred eEEEEEECCCCC-eEEEec----CCC----eEEEEEc--CCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeE
Q psy12356 5 MREASQRFSDGE-LLATGD----KGG----RVVIFQR--DPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK 73 (400)
Q Consensus 5 ~v~~v~fspdG~-~Las~s----~Dg----~I~iwd~--~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~ 73 (400)
.|+..+|++.|. ++|+|+ .|| +|+|||+ .+++ ......+.+|..... .
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~---------~~~~~~~~~~~~~~~------------~ 122 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGT---------VLAQNSYKVNKQWLR------------Y 122 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTC---------EEEEEEEEECGGGHH------------H
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCC---------EEeeeEEEcChhHHH------------H
Confidence 345667788774 666876 568 9999999 6542 111245777764322 1
Q ss_pred EEEEe--------cc----CCceEEEeeC---C---CeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEeCCC-
Q psy12356 74 IRWLR--------RK----NQAHFLLSTN---D---QSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSSSKG- 131 (400)
Q Consensus 74 v~~sp--------~~----~~~~~l~ss~---D---~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s~Dg- 131 (400)
+++++ .+ .+.+++.++. + ++|++||++++.. ..+...|.+++|+|++ +.||+++.|+
T Consensus 123 ~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~ 201 (415)
T 2hqs_A 123 AGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESG 201 (415)
T ss_dssp HHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTS-SEEEEEECTTS
T ss_pred HHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCC-CEEEEEEecCC
Confidence 11211 00 0235665443 3 7999999986553 3456789999999985 7899999875
Q ss_pred --eEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceee-cCCCC--CeEEEeecccccccCcccc
Q psy12356 132 --TIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKE-DNRRK--PAIRLCDMRAAALCDRHSK 206 (400)
Q Consensus 132 --~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d--g~i~lWD~~~~~~~~~~~~ 206 (400)
+|++||+++++... +.... .....+ ..+|++..++ +++.+ ..|++||++++...
T Consensus 202 ~~~i~~~d~~tg~~~~-----l~~~~-~~~~~~----------~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~----- 260 (415)
T 2hqs_A 202 RSALVIQTLANGAVRQ-----VASFP-RHNGAP----------AFSPDGSKLAFALSKTGSLNLYVMDLASGQIR----- 260 (415)
T ss_dssp SCEEEEEETTTCCEEE-----EECCS-SCEEEE----------EECTTSSEEEEEECTTSSCEEEEEETTTCCEE-----
T ss_pred CcEEEEEECCCCcEEE-----eecCC-CcccCE----------EEcCCCCEEEEEEecCCCceEEEEECCCCCEE-----
Confidence 99999999874311 11110 011122 2346664322 33344 45999999875421
Q ss_pred cccCCCCCCCcccccccccCeEEEEECCCCcEEEE-ec-CC--eEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCcee
Q psy12356 207 FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-RD-YL--CVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITAL 282 (400)
Q Consensus 207 ~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~-D~--tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i 282 (400)
. +..|...+.+++|||||++|+. +. ++ .|.+||+.++. +..+..|
T Consensus 261 ~------------l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~--~~~l~~~----------------- 309 (415)
T 2hqs_A 261 Q------------VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQRITWE----------------- 309 (415)
T ss_dssp E------------CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--CEECCCS-----------------
T ss_pred e------------CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC--EEEEecC-----------------
Confidence 1 2245678999999999998885 43 44 67777887653 2233212
Q ss_pred ecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeeccc-----ch-----------hhcccccceeEEEEccC
Q psy12356 283 RVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR-----GI-----------FADAHTYHISSTSVNSD 346 (400)
Q Consensus 283 ~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~-----~~-----------~~~gh~~~V~~i~fspD 346 (400)
...+.+++|+|||++|+.... .+ ...+|. .+.+++||||
T Consensus 310 ------------------------~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spd 364 (415)
T 2hqs_A 310 ------------------------GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPN 364 (415)
T ss_dssp ------------------------SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTT
T ss_pred ------------------------CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCC
Confidence 112344555666655543211 00 012343 7889999999
Q ss_pred CCEEEEe-cCC---eEEEEeCcc
Q psy12356 347 QETYLSA-DDL---RINLWHLEI 365 (400)
Q Consensus 347 g~~las~-~D~---~i~lW~~~~ 365 (400)
|++|+++ .|+ .|.+||++.
T Consensus 365 g~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 365 GTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp SSEEEEEEEETTEEEEEEEETTS
T ss_pred CCEEEEEEcCCCccEEEEEECCC
Confidence 9999885 444 789999874
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-19 Score=176.86 Aligned_cols=224 Identities=13% Similarity=0.073 Sum_probs=153.9
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|+|+++++++.|++|++||+.++ +.+..+..|.. .+.+++|+|++.
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~-----------~~~~~~~~~~~------------~~~~~~~~~~~~-- 224 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQANAVHVFDLKTL-----------AYKATVDLTGK------------WSKILLYDPIRD-- 224 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC-----------CEEEEEECSSS------------SEEEEEEETTTT--
T ss_pred CceeEEEEcCCCEEEEEECCCCEEEEEECCCc-----------eEEEEEcCCCC------------CeeEEEEcCCCC--
Confidence 37899999999999999999999999999753 23456666653 488999999874
Q ss_pred eEEEe-eCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEe--------CCCeEEEEeccccccccccccee
Q psy12356 84 HFLLS-TNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSS--------SKGTIRLCDMRAAALCDRHSKCL 151 (400)
Q Consensus 84 ~~l~s-s~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s--------~Dg~i~lWD~~~~~~~~~~~~~~ 151 (400)
.++++ +.|++|++||+++++.. .....+.+++|+|++ +.+++++ .|+.|++||+++++.....
T Consensus 225 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~---- 299 (433)
T 3bws_A 225 LVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI---- 299 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE----
T ss_pred EEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCCCcEEeec----
Confidence 55454 57999999999887631 223458999999986 5777776 5899999999987432210
Q ss_pred ccCcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEE
Q psy12356 152 IEGTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDV 230 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 230 (400)
.. ......+ ...+++ ...++++.|+.|++||+++++.. ..+ .+...+.++
T Consensus 300 -~~-~~~~~~~----------~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~----~~~-------------~~~~~~~~~ 350 (433)
T 3bws_A 300 -GP-PGNKRHI----------VSGNTENKIYVSDMCCSKIEVYDLKEKKVQ----KSI-------------PVFDKPNTI 350 (433)
T ss_dssp -EE-EECEEEE----------EECSSTTEEEEEETTTTEEEEEETTTTEEE----EEE-------------ECSSSEEEE
T ss_pred -cC-CCCcceE----------EECCCCCEEEEEecCCCEEEEEECCCCcEE----EEe-------------cCCCCCCeE
Confidence 00 0011122 223554 34555678999999999865432 111 234678999
Q ss_pred EECCCCcEEEEe-c---------------CCeEEEEeCCCCCCceeeecCCC------cCCCCccc-C-CCCCceeecCc
Q psy12356 231 KISNSGRYMISR-D---------------YLCVKVWDLHMESRPVETYPTHT------KEENGQLR-D-PSNITALRVPQ 286 (400)
Q Consensus 231 ~fSpdg~~las~-~---------------D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~~-~-~~~~~~i~l~~ 286 (400)
+|+|+|++|+.+ . |+.|++||+.++ .++..+.++. +.++|+++ + .+.++++++|+
T Consensus 351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD-TVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT-EEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC-cEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence 999999988743 3 469999999876 3566666543 34666643 2 23356666655
Q ss_pred c
Q psy12356 287 I 287 (400)
Q Consensus 287 ~ 287 (400)
+
T Consensus 430 ~ 430 (433)
T 3bws_A 430 R 430 (433)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-19 Score=198.86 Aligned_cols=309 Identities=12% Similarity=0.061 Sum_probs=190.8
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE-eccCCce
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL-RRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s-p~~~~~~ 84 (400)
+.+++|||||++||.++ ++.|++||..... +..+.++.... ......+...+.+++|+ |++. .
T Consensus 247 ~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~------------l~~l~~~~~~~-~~~~~~~~~~v~~~~~S~pdG~--~ 310 (1045)
T 1k32_A 247 YYPRHLNTDGRRILFSK-GGSIYIFNPDTEK------------IEKIEIGDLES-PEDRIISIPSKFAEDFSPLDGD--L 310 (1045)
T ss_dssp SCEEEEEESSSCEEEEE-TTEEEEECTTTCC------------EEECCCCCCCB-CCSEEEECGGGGEEEEEECGGG--C
T ss_pred cceeeEcCCCCEEEEEe-CCEEEEecCCceE------------eeeeccCcccc-cccccccccccceeeecCCCCC--E
Confidence 34679999999999985 8999999984321 11233321000 00001122347889999 9874 4
Q ss_pred EEEeeCCCeEEEEEccCCCc---ccccc-cEEEEEEecCCCCEEEEEeCCCeEE-EEecccccccccccceeccCcccce
Q psy12356 85 FLLSTNDQSFNIVDIKPTNM---EELNE-VITAAEFHPIDCNLFVYSSSKGTIR-LCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~---~~~~~-~V~sv~f~p~~~~~las~s~Dg~i~-lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
+++++ ++.|.+|++.++.. ..+.. .+.+++|+ ++ +.|++++.++.+. +||+.++.... +.. .....
T Consensus 311 la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~~~~-----l~~-~~~~~ 381 (1045)
T 1k32_A 311 IAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGKAEK-----FEE-NLGNV 381 (1045)
T ss_dssp EEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCCEEE-----CCC-CCCSE
T ss_pred EEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCCceE-----ecC-Cccce
Confidence 55555 88999999987763 23344 78999999 75 7888888888888 99988763211 100 00111
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+ ..+|++..++.++.++.|++||+.+++.. . .+.+|...+.+++|||||++|
T Consensus 382 ~~~----------~~SpDG~~la~~~~~~~v~~~d~~tg~~~----~------------~~~~~~~~v~~~~~SpDG~~l 435 (1045)
T 1k32_A 382 FAM----------GVDRNGKFAVVANDRFEIMTVDLETGKPT----V------------IERSREAMITDFTISDNSRFI 435 (1045)
T ss_dssp EEE----------EECTTSSEEEEEETTSEEEEEETTTCCEE----E------------EEECSSSCCCCEEECTTSCEE
T ss_pred eee----------EECCCCCEEEEECCCCeEEEEECCCCceE----E------------eccCCCCCccceEECCCCCeE
Confidence 222 23467665555567899999999876431 1 122566778999999999999
Q ss_pred EEe-cC----------CeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCcccccce--------
Q psy12356 240 ISR-DY----------LCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPIEL-------- 292 (400)
Q Consensus 240 as~-~D----------~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~~~-------- 292 (400)
+.+ .+ ++|++||+.++. +..+..|. +.++|+++ ..+.....+.|+....+.
T Consensus 436 a~~~~~~~~~~~~~~~~~i~l~d~~~g~--~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~ 513 (1045)
T 1k32_A 436 AYGFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKP 513 (1045)
T ss_dssp EEEEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEE
T ss_pred EEEecCccccccCCCCCeEEEEECCCCc--EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCcee
Confidence 853 32 499999999753 45555553 57888854 222222222222110000
Q ss_pred --------------e-------------eccCc-cceeccccccceEEEEEcCCCcEEeec---------------ccch
Q psy12356 293 --------------T-------------VEASP-RRIFANAHTYHINSISVNSDQLTVEAS---------------PRGI 329 (400)
Q Consensus 293 --------------~-------------~~~~~-~~~~~~~~~~~i~~i~~s~dg~~~~~~---------------~~~~ 329 (400)
. +.+.. +......|...+..++++|||++++.. ...+
T Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l 593 (1045)
T 1k32_A 514 FVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVL 593 (1045)
T ss_dssp EEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEE
T ss_pred EEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceE
Confidence 0 00100 111123466778999999999866630 1111
Q ss_pred hh----ccc----ccceeEEEEccCCCEEEEecCCeEEEEeCccCC
Q psy12356 330 FA----DAH----TYHISSTSVNSDQETYLSADDLRINLWHLEITD 367 (400)
Q Consensus 330 ~~----~gh----~~~V~~i~fspDg~~las~~D~~i~lW~~~~~~ 367 (400)
+. .+. ...|.+++|||||++|+++.+++|++||+.+.+
T Consensus 594 ~~~d~~~~~~~~l~~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 594 LKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp EEEETTTCCEEEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred EEEECCCCcEEEeecCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence 11 111 145789999999999999755589999997654
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.8e-19 Score=178.07 Aligned_cols=165 Identities=11% Similarity=0.088 Sum_probs=114.6
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.++.+++++++.+||+++.|+ |+||+................ +..+ .. .....+...|.+++|+|+++ .
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~-~~~~---~~----~~~~~~~~~v~~l~~spdg~--~ 106 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNK-IVDK---VQ----GLLVPMKFPIHHLALSCDNL--T 106 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTC-EEEC---CC----CEEECCSSCEEEEEECTTSC--E
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCccc-cccc---Cc----cccccCCCcccEEEEcCCCC--E
Confidence 367899999999999999888 999986421100000000000 0000 00 00111234599999999874 6
Q ss_pred EE----EeeCCCeEEEEEccCC--------C-------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc
Q psy12356 85 FL----LSTNDQSFNIVDIKPT--------N-------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD 145 (400)
Q Consensus 85 ~l----~ss~D~tI~lWd~~~~--------~-------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~ 145 (400)
++ +++.|++|+|||+.++ + +..|...|++++|+|+++++||+++.||+|++||++++..
T Consensus 107 lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~-- 184 (434)
T 2oit_A 107 LSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK-- 184 (434)
T ss_dssp EEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE--
T ss_pred EEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc--
Confidence 66 4567999999998654 1 1236778999999998668999999999999999987611
Q ss_pred cccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc
Q psy12356 146 RHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS 225 (400)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 225 (400)
.. . ..+|..
T Consensus 185 -----~~----------------------------------------------~--------------------~~~~~~ 193 (434)
T 2oit_A 185 -----VC----------------------------------------------A--------------------TLPSTV 193 (434)
T ss_dssp -----EE----------------------------------------------E--------------------EECGGG
T ss_pred -----ee----------------------------------------------e--------------------ccCCCC
Confidence 00 0 013556
Q ss_pred CeEEEEECCCCcEEEEe-cCCeEEEEeCC
Q psy12356 226 SISDVKISNSGRYMISR-DYLCVKVWDLH 253 (400)
Q Consensus 226 ~V~~v~fSpdg~~las~-~D~tIklWD~~ 253 (400)
.|.+++|||+|++|+++ .|++|++||++
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 89999999999999975 68999999998
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=190.15 Aligned_cols=113 Identities=13% Similarity=0.181 Sum_probs=83.2
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+.+++|||||+++++ +.||+|++||+.+++ ....+.+|... ...|.+++||||++ .
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~-----------~~~~~~~~~~~---------~~~v~~~~~SpDg~--~ 74 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNT-----------STVLIEGKKIE---------SLRAIRYEISPDRE--Y 74 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC-----------CEEEECTTTTT---------TTTCSEEEECTTSS--E
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCc-----------EEEEecccccc---------ccccceEEECCCCC--E
Confidence 4678999999998887 789999999998643 22344555410 01378899999984 5
Q ss_pred EEEeeCC---------CeEEEEEccCCCccc------ccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 85 FLLSTND---------QSFNIVDIKPTNMEE------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 85 ~l~ss~D---------~tI~lWd~~~~~~~~------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
+++++.+ +++++||+++++.+. +...+.+++|+||| +.||+++. +.|++||+.++.
T Consensus 75 l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~ 145 (723)
T 1xfd_A 75 ALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQ 145 (723)
T ss_dssp EEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSC
T ss_pred EEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCc
Confidence 6666553 789999999887422 22237889999986 67888776 799999998874
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.8e-18 Score=162.55 Aligned_cols=205 Identities=11% Similarity=0.113 Sum_probs=124.5
Q ss_pred eEEEEEECCCCCeEEEecC---CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 5 MREASQRFSDGELLATGDK---GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~---Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
.+..++|||||+ |++++. ++.|++|++.++ ..+.+..+..|. ..+..++|+|++.
T Consensus 41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g---------~~~~~~~~~~~~------------~~p~~~a~spdg~ 98 (347)
T 3hfq_A 41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ---------TAHKLNTVVAPG------------TPPAYVAVDEARQ 98 (347)
T ss_dssp CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT---------EEEEEEEEEEES------------CCCSEEEEETTTT
T ss_pred CcceEEEccCCe-EEEEEecCCCceEEEEEecCC---------cEEEeeeeecCC------------CCCEEEEECCCCC
Confidence 356799999999 554443 689999999643 223344433343 3477899999874
Q ss_pred CceEEEee-CCCeEEEEEcc-CCCccc---c------------cccEEEEEEecCCCCEEEEEeCCCeEEEEecc-cccc
Q psy12356 82 QAHFLLST-NDQSFNIVDIK-PTNMEE---L------------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR-AAAL 143 (400)
Q Consensus 82 ~~~~l~ss-~D~tI~lWd~~-~~~~~~---~------------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~-~~~~ 143 (400)
.+++++ .+++|++||+. ++.... . ...+.+++|+|++. ++++...++.|++||+. ++.+
T Consensus 99 --~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~ 175 (347)
T 3hfq_A 99 --LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQL 175 (347)
T ss_dssp --EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCE
T ss_pred --EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcE
Confidence 566665 68999999995 333211 1 12377899999875 77877789999999998 4422
Q ss_pred cccccceeccCcccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeeccc--ccccCcccccccCCCCCCCcccc
Q psy12356 144 CDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRA--AALCDRHSKFFEEPEDPTNKSFF 220 (400)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~--~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
... ............. +.+.|++. +.+++..++.|++||+.. +... ....+.... ..+
T Consensus 176 ~~~--~~~~~~~g~~p~~----------~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~--~~~~~~~~~-----~~~ 236 (347)
T 3hfq_A 176 SEQ--SVLTMEAGFGPRH----------LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFT--QLGIVKTIP-----ADY 236 (347)
T ss_dssp EEE--EEEECCTTCCEEE----------EEECTTSSEEEEEETTTTEEEEEEEETTTTEEE--EEEEEESSC-----TTC
T ss_pred EEe--eeEEcCCCCCCce----------EEECCCCCEEEEEeCCCCEEEEEEecCCCCceE--EeeeeeecC-----CCC
Confidence 110 0000000011111 23346654 455556789999999874 2210 001111000 000
Q ss_pred cccccCeEEEEECCCCcEEE-Ee-cCCeEEEEeCCC
Q psy12356 221 SEIISSISDVKISNSGRYMI-SR-DYLCVKVWDLHM 254 (400)
Q Consensus 221 ~~h~~~V~~v~fSpdg~~la-s~-~D~tIklWD~~~ 254 (400)
.....+..++|||||++|+ +. .+++|++||+..
T Consensus 237 -~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 237 -TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp -CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred -CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 0113578899999999874 43 579999999873
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=4.7e-18 Score=160.96 Aligned_cols=210 Identities=12% Similarity=0.135 Sum_probs=125.5
Q ss_pred eEEEEEECCCCCeEEEecCC-CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELLATGDKG-GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D-g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+.+++|+|||++|++++.+ +.|++|+++... +..+.+..+..+. .+..++|+|+++
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~-------~~~~~~~~~~~~~-------------~~~~~~~s~dg~-- 96 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD-------GALTFAAESALPG-------------SLTHISTDHQGQ-- 96 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTT-------CCEEEEEEEECSS-------------CCSEEEECTTSS--
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCC-------CceeeccccccCC-------------CCcEEEEcCCCC--
Confidence 46789999999999988876 999999997211 2223333443332 367899999874
Q ss_pred eEEEee-CCCeEEEEEccCCC---c-c--cccccEEEEEEecCCCCEEEEEe-CCCeEEEEeccc-ccccccccceeccC
Q psy12356 84 HFLLST-NDQSFNIVDIKPTN---M-E--ELNEVITAAEFHPIDCNLFVYSS-SKGTIRLCDMRA-AALCDRHSKCLIEG 154 (400)
Q Consensus 84 ~~l~ss-~D~tI~lWd~~~~~---~-~--~~~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~~~-~~~~~~~~~~~~~~ 154 (400)
.+++++ .++.|++||+..+. . . .....+.+++|+|++ +.+++++ .|+.|++||+.+ +.+...........
T Consensus 97 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 175 (343)
T 1ri6_A 97 FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV 175 (343)
T ss_dssp EEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECS
T ss_pred EEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCC-CEEEEecCCCCEEEEEEecCCCceeeecccccccC
Confidence 555554 58999999995332 1 1 112347789999986 4555555 899999999987 43211000000000
Q ss_pred cccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCccccccc-CCCCCCCcccccccccCeEEEEE
Q psy12356 155 TNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFE-EPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
.......+ ...+++. ..+++..++.|++||+......-.....+. .+. . + .....+..++|
T Consensus 176 ~~~~~~~~----------~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~-----~-~-~~~~~~~~i~~ 238 (343)
T 1ri6_A 176 EGAGPRHM----------VFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE-----N-F-SDTRWAADIHI 238 (343)
T ss_dssp TTCCEEEE----------EECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT-----T-C-CSCCCEEEEEE
T ss_pred CCCCcceE----------EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCc-----c-c-cccCCccceEE
Confidence 01111112 2235553 444455789999999964211000001110 000 0 0 11235778999
Q ss_pred CCCCcEEE-Ee-cCCeEEEEeCCC
Q psy12356 233 SNSGRYMI-SR-DYLCVKVWDLHM 254 (400)
Q Consensus 233 Spdg~~la-s~-~D~tIklWD~~~ 254 (400)
+|||++|+ +. .++.|++||+..
T Consensus 239 s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 239 TPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCCEEEEEecCCCEEEEEEEcC
Confidence 99999876 44 589999999974
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.3e-18 Score=179.52 Aligned_cols=316 Identities=9% Similarity=0.008 Sum_probs=181.0
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceee-eeeeccCcchhhcccc-----cccceeeEEEEEec
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVY-STFQSHEPEFDYLKSL-----EIEEKINKIRWLRR 79 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~~~~~~~~-----~~~~~V~~v~~sp~ 79 (400)
+..+.|+ |+.+++++.|+ | +||+.+++. . +.+..|......+... .....|.+++|+|+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~-----------~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd 92 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKS-----------AQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR 92 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC------------------CEEEEHHHHHTTC-----------CCCEEEEETTT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcE-----------eeEEeechhHhhhhccchhccccccccCceeEEECCC
Confidence 4557788 67777787788 8 999986531 0 1222332100000000 00124889999998
Q ss_pred cCCceEEEeeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc-----cccccccccee
Q psy12356 80 KNQAHFLLSTNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA-----AALCDRHSKCL 151 (400)
Q Consensus 80 ~~~~~~l~ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~-----~~~~~~~~~~~ 151 (400)
. .++.+ .|++|++||+.+++.. .+...+.+++|+|+| +.||++ .|+.|++||+.+ +..........
T Consensus 93 -~--~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~ 166 (706)
T 2z3z_A 93 -G--LVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGT 166 (706)
T ss_dssp -T--EEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCB
T ss_pred -C--eEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccCCCcEEeccCCC
Confidence 3 55555 4699999999887642 234557789999986 677874 789999999988 64321100000
Q ss_pred ccCcccceeceeccC---chhhhhhcccCcceeecC---------------------------------CCCCeEEEeec
Q psy12356 152 IEGTNCNCQGLIVPE---SKREERQSSQNRREKEDN---------------------------------RRKPAIRLCDM 195 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---------------------------------~~dg~i~lWD~ 195 (400)
....++..+.+ +....+..+|++..++.. ..+..|++||+
T Consensus 167 ----~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~ 242 (706)
T 2z3z_A 167 ----ETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL 242 (706)
T ss_dssp ----TTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET
T ss_pred ----CCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC
Confidence 00000000000 000111223444322221 14578999999
Q ss_pred ccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-ecCC-----eEEEEeCCCCCCceeeec--C---
Q psy12356 196 RAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-RDYL-----CVKVWDLHMESRPVETYP--T--- 264 (400)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~-----tIklWD~~~~~~~l~~~~--~--- 264 (400)
.++... .... ...|...+.+++|||||++|+. +.++ +|++||+.++.. ++.+. .
T Consensus 243 ~~~~~~----~~~~----------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~-~~~~~~~~~~~ 307 (706)
T 2z3z_A 243 ATGKTV----YLQT----------GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF-VRTLFVETDKH 307 (706)
T ss_dssp TTTEEE----ECCC----------CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE-EEEEEEEECSS
T ss_pred CCCceE----eecc----------CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce-eeEEEEccCCC
Confidence 875431 1110 0134567899999999998885 3443 899999998622 22211 1
Q ss_pred -------CCcCC--CCccc-CCCCCceeecCcccccceeeccCccceeccccccceEE-EEEcCCCcEEeeccc------
Q psy12356 265 -------HTKEE--NGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINS-ISVNSDQLTVEASPR------ 327 (400)
Q Consensus 265 -------h~~~~--~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~-i~~s~dg~~~~~~~~------ 327 (400)
-.+++ +|+++ +++.++.+++|.+... +...+.+ ..|...+.. ++|+|||+.++....
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~-----~~~~~~l-~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT-----GRLIRQV-TKGEWEVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETT-----SCEEEEC-CCSSSCEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred eECccCCceeecCCCCEEEEEEccCCccEEEEEECC-----CCEEEec-CCCCeEEEeeeEEcCCCCEEEEEecCCCCce
Confidence 13567 88865 3556677888876422 1111222 346666776 799999987653211
Q ss_pred -chhh----------cccccceeEEEEccCCCEEEEe--cC---CeEEEEeCccCC
Q psy12356 328 -GIFA----------DAHTYHISSTSVNSDQETYLSA--DD---LRINLWHLEITD 367 (400)
Q Consensus 328 -~~~~----------~gh~~~V~~i~fspDg~~las~--~D---~~i~lW~~~~~~ 367 (400)
.++. -.|...+.+++|||||++|+.+ ++ ..|.+||+++.+
T Consensus 382 ~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 382 RHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp BEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 1110 1366779999999999998864 32 569999987643
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.80 E-value=9.6e-18 Score=165.76 Aligned_cols=183 Identities=11% Similarity=0.115 Sum_probs=120.1
Q ss_pred CCCeEEEecCC------CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE
Q psy12356 14 DGELLATGDKG------GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL 87 (400)
Q Consensus 14 dG~~Las~s~D------g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ 87 (400)
.+.+||.++.+ ++|++||+++.. .+.+.+|. ..|.+++|+|+++ .+++
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~~------------~~~l~~~~------------~~v~~~~~Spdg~--~la~ 195 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGYN------------QFVVHRSP------------QPLMSPAWSPDGS--KLAY 195 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSCS------------CEEEEEES------------SCEEEEEECTTSS--EEEE
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCCC------------CEEEeCCC------------CcceeeEEcCCCC--EEEE
Confidence 47788877765 799999997421 34566776 3489999999975 6777
Q ss_pred eeCCC---eEEEEEccCCCc---ccccccEEEEEEecCCCCEEE-EEeCCCe--EEEEecccccccccccceeccCcccc
Q psy12356 88 STNDQ---SFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFV-YSSSKGT--IRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 88 ss~D~---tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~la-s~s~Dg~--i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
++.|+ +|++||+++++. ..+...+.+++|+|++ +.|+ +++.|+. |++||++++.... +... ...
T Consensus 196 ~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg-~~la~~~~~~g~~~i~~~d~~~~~~~~-----l~~~-~~~ 268 (415)
T 2hqs_A 196 VTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDG-SKLAFALSKTGSLNLYVMDLASGQIRQ-----VTDG-RSN 268 (415)
T ss_dssp EECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCEEE-----CCCC-SSC
T ss_pred EEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCC-CEEEEEEecCCCceEEEEECCCCCEEe-----CcCC-CCc
Confidence 77664 999999998874 3345678999999986 5555 6666654 9999998874311 1000 011
Q ss_pred eeceeccCchhhhhhcccCcceee-cCCCCC--eEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 159 CQGLIVPESKREERQSSQNRREKE-DNRRKP--AIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dg--~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
...+ ..+|++...+ ....++ .|.+||+.++.. .. +..|...+.+++||||
T Consensus 269 ~~~~----------~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-----~~------------l~~~~~~~~~~~~spd 321 (415)
T 2hqs_A 269 NTEP----------TWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-----QR------------ITWEGSQNQDADVSSD 321 (415)
T ss_dssp EEEE----------EECTTSSEEEEEECTTSSCEEEEEETTSSCC-----EE------------CCCSSSEEEEEEECTT
T ss_pred ccce----------EECCCCCEEEEEECCCCCcEEEEEECCCCCE-----EE------------EecCCCcccCeEECCC
Confidence 1122 2335654322 222345 566678776432 11 1134457889999999
Q ss_pred CcEEEEe-c---CCeEEEEeCCCCC
Q psy12356 236 GRYMISR-D---YLCVKVWDLHMES 256 (400)
Q Consensus 236 g~~las~-~---D~tIklWD~~~~~ 256 (400)
|++|+.+ . +..|++||+.++.
T Consensus 322 G~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 322 GKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp SSEEEEEEECSSCEEEEEEETTTCC
T ss_pred CCEEEEEECcCCceEEEEEECCCCC
Confidence 9999853 3 3589999999753
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-17 Score=170.73 Aligned_cols=264 Identities=8% Similarity=0.011 Sum_probs=172.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe----cc
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR----RK 80 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp----~~ 80 (400)
.+..++|||||++|++++.|++|++||+... ..+++.++..+ ..+..++|+| ++
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~---------t~~~~~~i~~g-------------~~p~~va~sp~~~~dg 237 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAK---------EPTKVAEIKIG-------------IEARSVESSKFKGYED 237 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSS---------SCEEEEEEECC-------------SEEEEEEECCSTTCTT
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCC---------CCcEEEEEecC-------------CCcceEEeCCCcCCCC
Confidence 3678999999999999999999999999311 12345555533 2378899999 87
Q ss_pred CCceEEEee-CCCeEEEEEccCCCc-c---c----------c-cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc
Q psy12356 81 NQAHFLLST-NDQSFNIVDIKPTNM-E---E----------L-NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC 144 (400)
Q Consensus 81 ~~~~~l~ss-~D~tI~lWd~~~~~~-~---~----------~-~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~ 144 (400)
. .+++++ .+++|+|||..++++ + . | ...+.++.|+|++..++++...+++|.+||+.+...+
T Consensus 238 ~--~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l 315 (543)
T 1nir_A 238 R--YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL 315 (543)
T ss_dssp T--EEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC
T ss_pred C--EEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc
Confidence 4 555665 589999999988763 1 1 1 1258899999988778888888999999999876322
Q ss_pred ccccceeccCcccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccc
Q psy12356 145 DRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEI 223 (400)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 223 (400)
.. ..+.. .....++ .+.|++. ..+++..+++|++||+.++++.. .+.... ..|
T Consensus 316 ~~--~~i~~--~~~~~~~----------~~spdg~~l~va~~~~~~v~v~D~~tg~l~~----~i~~g~--------~ph 369 (543)
T 1nir_A 316 TV--TSIGA--APFLHDG----------GWDSSHRYFMTAANNSNKVAVIDSKDRRLSA----LVDVGK--------TPH 369 (543)
T ss_dssp EE--EEEEC--CSSCCCE----------EECTTSCEEEEEEGGGTEEEEEETTTTEEEE----EEECSS--------SBC
T ss_pred ee--EEecc--CcCccCc----------eECCCCCEEEEEecCCCeEEEEECCCCeEEE----eeccCC--------CCC
Confidence 10 00000 0111122 2235553 44455568999999999876431 111000 124
Q ss_pred ccCeEEEEECCC-CcEEEEe--cCCeEEEEeCCCC------CCceeeecCCC-------cCCCCccc-CCC-------CC
Q psy12356 224 ISSISDVKISNS-GRYMISR--DYLCVKVWDLHME------SRPVETYPTHT-------KEENGQLR-DPS-------NI 279 (400)
Q Consensus 224 ~~~V~~v~fSpd-g~~las~--~D~tIklWD~~~~------~~~l~~~~~h~-------~~~~g~~~-~~~-------~~ 279 (400)
.+....+ ++|+ |++++++ +|++|+|||+.+. .++++++.+|. ++|+|+.+ +.+ .+
T Consensus 370 ~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~ 448 (543)
T 1nir_A 370 PGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARIS 448 (543)
T ss_dssp CTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHH
T ss_pred CCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccC
Confidence 4433333 5787 6666764 5799999999872 35688888773 46898865 222 15
Q ss_pred ceeecCcccccceeeccCcccee-------ccccccceEEEEEcCCCcEEee
Q psy12356 280 TALRVPQIKPIELTVEASPRRIF-------ANAHTYHINSISVNSDQLTVEA 324 (400)
Q Consensus 280 ~~i~l~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~i~~s~dg~~~~~ 324 (400)
.+|++|+....+... +.+ +..+...+.++.|+|||+.+..
T Consensus 449 ~~v~v~d~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~ 495 (543)
T 1nir_A 449 QSVAVFDLKNLDAKY-----QVLPIAEWADLGEGAKRVVQPEYNKRGDEVWF 495 (543)
T ss_dssp TCEEEEETTCTTSCC-----EEECHHHHHCCCSSCCEEEEEEECSSSSEEEE
T ss_pred ceEEEEECCCCCCCe-----EEeechhhcccCCCCCceEeccCCCCCCEEEE
Confidence 689999876543210 111 1234567899999999987653
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-18 Score=179.63 Aligned_cols=321 Identities=10% Similarity=0.045 Sum_probs=182.2
Q ss_pred EEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE
Q psy12356 7 EASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL 86 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l 86 (400)
.+++|+|||++++++ .|++|++||+.+++ ....+.+|... ...|.+++||||++ .++
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~-----------~~~~~~~~~~~---------~~~~~~~~~SpDg~--~la 75 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQ-----------SYTILSNRTMK---------SVNASNYGLSPDRQ--FVY 75 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCC-----------EEEEECHHHHH---------TTTCSEEEECTTSS--EEE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCc-----------EEEEEcccccc---------ccceeeEEECCCCC--eEE
Confidence 478999999777765 59999999998642 22334444210 01277899999985 566
Q ss_pred EeeC---------CCeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccc-cce---
Q psy12356 87 LSTN---------DQSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRH-SKC--- 150 (400)
Q Consensus 87 ~ss~---------D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~-~~~--- 150 (400)
+++. |++|++||+++++. ..+...+.+++|+||| +.||+++ |+.|++||+.++...+.. ...
T Consensus 76 ~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~ 153 (719)
T 1z68_A 76 LESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQITFNGRENK 153 (719)
T ss_dssp EEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCCCCBTTT
T ss_pred EEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCC
Confidence 6654 78999999998886 5555678899999986 6778875 789999999887432100 000
Q ss_pred eccCcccceece--eccCchhhhhhcccCcceeecCCC----------------------------------CCeEEEee
Q psy12356 151 LIEGTNCNCQGL--IVPESKREERQSSQNRREKEDNRR----------------------------------KPAIRLCD 194 (400)
Q Consensus 151 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------dg~i~lWD 194 (400)
+.. +...+-. .+ .+....+..+|++..++.++. ...|++||
T Consensus 154 v~~--g~~~~v~~ee~-~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d 230 (719)
T 1z68_A 154 IFN--GIPDWVYEEEM-LATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIID 230 (719)
T ss_dssp EEE--SSCCHHHHHHT-TCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred eEc--ccccceeeeec-ccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEE
Confidence 000 0000000 00 000001233455533222211 22888999
Q ss_pred cccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-c--C--CeEEEEe----CCCCCCceeee---
Q psy12356 195 MRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-D--Y--LCVKVWD----LHMESRPVETY--- 262 (400)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~--D--~tIklWD----~~~~~~~l~~~--- 262 (400)
+.++.... ..+ +..| ..+.+|...+.+++|||||+++++. + + ..|.+|| +.++. +...+
T Consensus 231 ~~~~~~~~-~~~-~~~~------~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~-~~~~~~~~ 301 (719)
T 1z68_A 231 TTYPAYVG-PQE-VPVP------AMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD-CPKTQEHI 301 (719)
T ss_dssp SSCHHHHC-CEE-CCCC------HHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE-CCGGGEEE
T ss_pred CCCCCccc-eeE-ccCC------ccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc-eEEEEecc
Confidence 98765310 000 0000 0123566789999999999887753 2 2 3588899 76653 22223
Q ss_pred -cCC------------CcCCCCccc---CCCCC--ceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEee
Q psy12356 263 -PTH------------TKEENGQLR---DPSNI--TALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEA 324 (400)
Q Consensus 263 -~~h------------~~~~~g~~~---~~~~~--~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~ 324 (400)
.+| .+++||+.+ ....+ ..+.+|++... . .+.+ ..+...+..+.++ ||+.+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~------~-~~~l-t~~~~~v~~~~~~-d~~~i~~ 372 (719)
T 1z68_A 302 EESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE------N-AIQI-TSGKWEAINIFRV-TQDSLFY 372 (719)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST------T-CEEC-SCSSSCEEEEEEE-CSSEEEE
T ss_pred cccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC------c-eEec-ccCceEEEEEEEE-eCCEEEE
Confidence 222 245777732 22223 34444443221 1 1122 2345567777777 7765542
Q ss_pred ccc---------chhh-----------------cccccceeEEEEccCCCEEEE-e-cC--CeEEEEeCccCCeeEEEEe
Q psy12356 325 SPR---------GIFA-----------------DAHTYHISSTSVNSDQETYLS-A-DD--LRINLWHLEITDQSFNIVD 374 (400)
Q Consensus 325 ~~~---------~~~~-----------------~gh~~~V~~i~fspDg~~las-~-~D--~~i~lW~~~~~~~~~~~~~ 374 (400)
... ++|. .+|...+..++|||||++|+. + .+ ..+.+|++.+++ +.+++.
T Consensus 373 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~-~~~~~~ 451 (719)
T 1z68_A 373 SSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ-EIKILE 451 (719)
T ss_dssp EESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC-EEEEEE
T ss_pred EEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC-EEEEee
Confidence 211 1110 125567789999999998874 3 32 468999987544 455554
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.3e-17 Score=155.21 Aligned_cols=198 Identities=8% Similarity=-0.007 Sum_probs=123.9
Q ss_pred EEEECCCCCeEEEecC-CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeE-EEEEeccCCceE
Q psy12356 8 ASQRFSDGELLATGDK-GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINK-IRWLRRKNQAHF 85 (400)
Q Consensus 8 ~v~fspdG~~Las~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~-v~~sp~~~~~~~ 85 (400)
+++|+|||++|++++. +++|++||..+++ . ....+..+.. ... ++|+|+++ .+
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~---------~-~~~~~~~~~~-------------~~~~~~~s~dg~--~l 98 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEP---------P-KVVAIQEGQS-------------SMADVDITPDDQ--FA 98 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSS---------C-EEEEEEECSS-------------CCCCEEECTTSS--EE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCc---------e-eEEecccCCC-------------CccceEECCCCC--EE
Confidence 8999999997666655 8999999997542 1 1334444432 334 89999874 45
Q ss_pred EEeeCC-C--eEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCe-EEEEecccccccccccceeccCcccc
Q psy12356 86 LLSTND-Q--SFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGT-IRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 86 l~ss~D-~--tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~-i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
+++..+ + +|++||+++++.. .......+++|+|++..++++...++. |++|++.............. .....
T Consensus 99 ~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~ 177 (331)
T 3u4y_A 99 VTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTR 177 (331)
T ss_dssp EECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSS
T ss_pred EEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCC
Confidence 544333 3 9999999887632 123446899999997556677677788 99999876422110000000 00011
Q ss_pred eeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 159 CQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
...+ ...+++. ..++...++.|++||+.++.... ....+ .....+..++|+|||+
T Consensus 178 ~~~~----------~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~-~~~~~-------------~~~~~~~~~~~spdg~ 233 (331)
T 3u4y_A 178 PFNI----------TFTPDGNFAFVANLIGNSIGILETQNPENIT-LLNAV-------------GTNNLPGTIVVSRDGS 233 (331)
T ss_dssp EEEE----------EECTTSSEEEEEETTTTEEEEEECSSTTSCE-EEEEE-------------ECSSCCCCEEECTTSS
T ss_pred ccce----------EECCCCCEEEEEeCCCCeEEEEECCCCcccc-eeeec-------------cCCCCCceEEECCCCC
Confidence 1122 2335553 45555678999999998754300 01111 1124567899999999
Q ss_pred EEE-Ee-cCCeEEEEeCCCC
Q psy12356 238 YMI-SR-DYLCVKVWDLHME 255 (400)
Q Consensus 238 ~la-s~-~D~tIklWD~~~~ 255 (400)
+|+ +. .++.|.+||+.++
T Consensus 234 ~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 234 TVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp EEEEECSSEEEEEEEETTTT
T ss_pred EEEEEEcCCCEEEEEECCCC
Confidence 775 43 4688999999875
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-17 Score=153.34 Aligned_cols=113 Identities=12% Similarity=-0.048 Sum_probs=78.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCC-CCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDP-LSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..|.+++|||||++||+++ ++.|++||+.+ ++ ....+.+|.. ..|.+++|+|++.
T Consensus 42 ~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~-----------~~~~~~~~~~-----------~~~~~~~~spdg~- 97 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS-----------PEKVDTGFAT-----------ICNNDHGISPDGA- 97 (297)
T ss_dssp SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS-----------CEECCCTTCC-----------CBCSCCEECTTSS-
T ss_pred cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC-----------ceEecccccc-----------ccccceEECCCCC-
Confidence 3578999999999999987 88999999986 42 1223334421 2477899999874
Q ss_pred ceEEEee--CCCeEEEEEc--cCCCccc--ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 83 AHFLLST--NDQSFNIVDI--KPTNMEE--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 83 ~~~l~ss--~D~tI~lWd~--~~~~~~~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+++++ .++.++||.+ .++.... ....+..++|+|++..++++++.|+.++||+++..
T Consensus 98 -~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 98 -LYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp -EEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred -EEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 566666 3456666655 4444322 22348889999986444447778999999997543
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-17 Score=182.45 Aligned_cols=250 Identities=13% Similarity=0.138 Sum_probs=158.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.+.++.|++| .++++++.|++++||.++... +. .+.+..|. .+..++|+|++.
T Consensus 204 ~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g-------~~---~~~l~~~~-------------~~~~~~~SpDG~-- 257 (1045)
T 1k32_A 204 THVSSPVIVGH-RIYFITDIDGFGQIYSTDLDG-------KD---LRKHTSFT-------------DYYPRHLNTDGR-- 257 (1045)
T ss_dssp SCCEEEEEETT-EEEEEECTTSSCEEEEEETTS-------CS---CEECCCCC-------------SSCEEEEEESSS--
T ss_pred CcccceEEeCC-EEEEEEeccCceEEEEEeCCC-------Cc---ceEecCCC-------------CcceeeEcCCCC--
Confidence 35678899998 677788889999999875321 11 22344443 145679999874
Q ss_pred eEEEeeCCCeEEEEEccCCCcccc--------------cccEEEEEEe-cCCCCEEEEEeCCCeEEEEeccccccccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEEL--------------NEVITAAEFH-PIDCNLFVYSSSKGTIRLCDMRAAALCDRHS 148 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~~--------------~~~V~sv~f~-p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~ 148 (400)
.++.+ .|+.|++||+.++.+..+ ...+.+++|+ |++ +.+|+++ ++.|.+||+.++....
T Consensus 258 ~la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~~~~~~--- 331 (1045)
T 1k32_A 258 RILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSGTYVLK--- 331 (1045)
T ss_dssp CEEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGG-GCEEEEE-TTEEEEECTTSSBEEE---
T ss_pred EEEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCC-CEEEEEE-cCEEEEEcCCCCceEE---
Confidence 45444 689999999855443222 2257899999 986 6677776 8899999998763211
Q ss_pred ceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEE-EeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 149 KCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIR-LCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~-lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
+..........+ ..+ ++...+..+.++.+. +||+..+... . +.+|...+
T Consensus 332 --~~~~~~~~~~~~----------~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-----~------------l~~~~~~~ 381 (1045)
T 1k32_A 332 --VPEPLRIRYVRR----------GGD-TKVAFIHGTREGDFLGIYDYRTGKAE-----K------------FEENLGNV 381 (1045)
T ss_dssp --CSCCSCEEEEEE----------CSS-SEEEEEEEETTEEEEEEEETTTCCEE-----E------------CCCCCCSE
T ss_pred --ccCCCcceEEee----------eEc-CCCeEEEEECCCceEEEEECCCCCce-----E------------ecCCccce
Confidence 000000011111 122 332222222366777 8887654321 1 12455679
Q ss_pred EEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCcccC-CC----------CCceeecCccc
Q psy12356 228 SDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLRD-PS----------NITALRVPQIK 288 (400)
Q Consensus 228 ~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~~-~~----------~~~~i~l~~~~ 288 (400)
..++|||||++|++ +.+++|++||+.++. ....+.+|. ++|||++++ .+ ....+++|++.
T Consensus 382 ~~~~~SpDG~~la~~~~~~~v~~~d~~tg~-~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 382 FAMGVDRNGKFAVVANDRFEIMTVDLETGK-PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCC-EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred eeeEECCCCCEEEEECCCCeEEEEECCCCc-eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 99999999999986 467999999999764 344444552 578999652 22 23588888765
Q ss_pred ccceeeccCccceeccccccceEEEEEcCCCcEEee
Q psy12356 289 PIELTVEASPRRIFANAHTYHINSISVNSDQLTVEA 324 (400)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~ 324 (400)
..+. . ....|...+..++|+|||++|+.
T Consensus 461 ~g~~-------~-~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 461 GRKI-------F-AATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp TTEE-------E-ECSCSSSBEEEEEECTTSCEEEE
T ss_pred CCcE-------E-EeeCCCcccCCceEcCCCCEEEE
Confidence 3221 1 12356677888999999997763
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.8e-18 Score=174.59 Aligned_cols=191 Identities=12% Similarity=0.033 Sum_probs=118.5
Q ss_pred eEEEEEECCCCCeEEEecC-CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELLATGDK-GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.|++|+|||||++||+++. ||+++||+++++ +. +.+..|.. ..|..++|+|| .
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g-----------~~-~~lt~~~~-----------~~~~~~~~spd-~-- 76 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG-----------ET-VKLNREPI-----------NSVLDPHYGVG-R-- 76 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETT-----------EE-EECCSSCC-----------SEECEECTTCS-E--
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCC-----------Cc-Eeeecccc-----------cccccccCCCC-e--
Confidence 4889999999999999987 999999998542 11 23333321 24788999987 2
Q ss_pred eEEEeeC---CCeEEEEEccC---CCcccc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 84 HFLLSTN---DQSFNIVDIKP---TNMEEL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~---D~tI~lWd~~~---~~~~~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.+++++. +...+||.++. +....+ ...+...+|+|++..++++++.++.+.+||+.+++... +..
T Consensus 77 ~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~-----l~~-- 149 (582)
T 3o4h_A 77 VILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-----LAR-- 149 (582)
T ss_dssp EEEEEECSTTSCCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-----EEE--
T ss_pred EEEEeccCCCCcceEEEEEeccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE-----eec--
Confidence 4444443 56677766643 221111 12244567888765544444444445599998874311 100
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCC----CeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEE
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRK----PAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVK 231 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 231 (400)
...+. ...+|++...+..+.+ +.|++||+.++... . +.+|...+.+++
T Consensus 150 -~~~~~----------~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-----~------------l~~~~~~~~~~~ 201 (582)
T 3o4h_A 150 -LPGFG----------FVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-----V------------FDSGEGSFSSAS 201 (582)
T ss_dssp -ESSCE----------EEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-----E------------ECCSSCEEEEEE
T ss_pred -CCCce----------EEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-----E------------eecCCCccccce
Confidence 00011 1234666544432233 68999998865421 1 235667789999
Q ss_pred ECCCCcEEEEe-cCC--eEEEEeCCCCC
Q psy12356 232 ISNSGRYMISR-DYL--CVKVWDLHMES 256 (400)
Q Consensus 232 fSpdg~~las~-~D~--tIklWD~~~~~ 256 (400)
|||||++|+++ .++ +|++||+.++.
T Consensus 202 ~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 202 ISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp ECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred ECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 99999999964 466 89999998763
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.4e-16 Score=147.63 Aligned_cols=253 Identities=12% Similarity=0.068 Sum_probs=153.3
Q ss_pred CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccc-eeeEEEEEeccCCceEEE-eeCCCe
Q psy12356 16 ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEE-KINKIRWLRRKNQAHFLL-STNDQS 93 (400)
Q Consensus 16 ~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~-~V~~v~~sp~~~~~~~l~-ss~D~t 93 (400)
++|++++.+++|++||..++ +.++.+..... . .+..++|+|++. .+++ ++.++.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~-----------~~~~~~~~~~~-----------~~~~~~~~~s~dg~--~l~v~~~~~~~ 57 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM-----------AVDKVITIADA-----------GPTPMVPMVAPGGR--IAYATVNKSES 57 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-----------EEEEEEECTTC-----------TTCCCCEEECTTSS--EEEEEETTTTE
T ss_pred cEEEEcCCCCeEEEEECCCC-----------cEEEEEEcCCC-----------CCCccceEEcCCCC--EEEEEeCCCCe
Confidence 57899999999999998753 23344432110 0 256799999874 4444 456899
Q ss_pred EEEEEccCCCcc-c--ccc------cEEEEEEecCCCCEEEEEe------------CCCeEEEEecccccccccccceec
Q psy12356 94 FNIVDIKPTNME-E--LNE------VITAAEFHPIDCNLFVYSS------------SKGTIRLCDMRAAALCDRHSKCLI 152 (400)
Q Consensus 94 I~lWd~~~~~~~-~--~~~------~V~sv~f~p~~~~~las~s------------~Dg~i~lWD~~~~~~~~~~~~~~~ 152 (400)
|.+||+.+++.. . ... .+.+++|+|++ +.+++++ .++.|.+||+.+++...
T Consensus 58 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~------- 129 (337)
T 1pby_B 58 LVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK------- 129 (337)
T ss_dssp EEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE-------
T ss_pred EEEEECCCCCeEeeEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEEE-------
Confidence 999999887732 1 111 45678999986 5566654 45677777765542100
Q ss_pred cCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 153 EGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
.+ .....+.+++|
T Consensus 130 ------------------------------------------------------~~-------------~~~~~~~~~~~ 142 (337)
T 1pby_B 130 ------------------------------------------------------AF-------------EAPRQITMLAW 142 (337)
T ss_dssp ------------------------------------------------------EE-------------ECCSSCCCEEE
T ss_pred ------------------------------------------------------EE-------------eCCCCcceeEE
Confidence 00 00123556889
Q ss_pred CCCCcEEEEecCCeEEEEeCCCCCCceeeecCC------CcCCCCccc--CCCCCc-----------------------e
Q psy12356 233 SNSGRYMISRDYLCVKVWDLHMESRPVETYPTH------TKEENGQLR--DPSNIT-----------------------A 281 (400)
Q Consensus 233 Spdg~~las~~D~tIklWD~~~~~~~l~~~~~h------~~~~~g~~~--~~~~~~-----------------------~ 281 (400)
+|||++|+.+ ++.|++||+.++. .+..+..+ .+.++|+.+ +..... .
T Consensus 143 s~dg~~l~~~-~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (337)
T 1pby_B 143 ARDGSKLYGL-GRDLHVMDPEAGT-LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG 220 (337)
T ss_dssp CTTSSCEEEE-SSSEEEEETTTTE-EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE
T ss_pred CCCCCEEEEe-CCeEEEEECCCCc-EeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccc
Confidence 9999977765 6789999998753 44444432 234566533 111111 2
Q ss_pred eecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccch--h---------hcccccceeEEEEccCCCEE
Q psy12356 282 LRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGI--F---------ADAHTYHISSTSVNSDQETY 350 (400)
Q Consensus 282 i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~--~---------~~gh~~~V~~i~fspDg~~l 350 (400)
+.+|+....+. ...-...+...+..++|+|||+++......+ + .......+.+++|+|||++|
T Consensus 221 v~~~d~~~~~~------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 294 (337)
T 1pby_B 221 LLTMDLETGEM------AMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTV 294 (337)
T ss_dssp EEEEETTTCCE------EEEEEEECSSCEEEEEECTTSSEEEEEESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEE
T ss_pred eEEEeCCCCCc------eEeecCCCCCceeeEEECCCCCEEEEeCCeEEEEECCCCcCcceecCCCceeeEEECCCCCEE
Confidence 33343322211 0111123445677899999998765432111 0 01123467899999999988
Q ss_pred EEe-cCCeEEEEeCccCCeeEEEEeec
Q psy12356 351 LSA-DDLRINLWHLEITDQSFNIVDIK 376 (400)
Q Consensus 351 as~-~D~~i~lW~~~~~~~~~~~~~~~ 376 (400)
+++ .|+.|++||+.+.+ ....+...
T Consensus 295 ~~~~~~~~i~v~d~~~~~-~~~~~~~~ 320 (337)
T 1pby_B 295 WLGGALGDLAAYDAETLE-KKGQVDLP 320 (337)
T ss_dssp EEESBSSEEEEEETTTCC-EEEEEECG
T ss_pred EEEcCCCcEEEEECcCCc-EEEEEEcC
Confidence 886 68999999998655 34444443
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=5.4e-16 Score=147.63 Aligned_cols=206 Identities=10% Similarity=0.017 Sum_probs=131.6
Q ss_pred eeEEEEEECCCCCeEEEecC-------CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEE
Q psy12356 4 YMREASQRFSDGELLATGDK-------GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 76 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~-------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~ 76 (400)
..+..++|+|||++|++++. +++|.+||..+++ ....+... ..+..++|
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~-----------~~~~~~~~-------------~~~~~~~~ 96 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE-----------VTQAIHND-------------LKPFGATI 96 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC-----------EEEEEEES-------------SCCCSEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe-----------EEEEEecC-------------CCcceEEE
Confidence 34678999999999988774 5689999987642 23334322 22567899
Q ss_pred EeccCCceEEE-eeCCCeEEEEEccCCCcc-cc---cc---------cEEEEEEecCCCCEEEEE-eCCCeEEEEecccc
Q psy12356 77 LRRKNQAHFLL-STNDQSFNIVDIKPTNME-EL---NE---------VITAAEFHPIDCNLFVYS-SSKGTIRLCDMRAA 141 (400)
Q Consensus 77 sp~~~~~~~l~-ss~D~tI~lWd~~~~~~~-~~---~~---------~V~sv~f~p~~~~~las~-s~Dg~i~lWD~~~~ 141 (400)
+|+++ .+++ ...+++|.+||+++++.. .. .. .+.+++|+|++..+++++ +.++.|.+||+.++
T Consensus 97 s~dg~--~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~ 174 (353)
T 3vgz_A 97 NNTTQ--TLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI 174 (353)
T ss_dssp ETTTT--EEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT
T ss_pred CCCCC--EEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC
Confidence 99874 4555 456899999999888731 11 11 268899999875455554 35899999999887
Q ss_pred cccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 142 ALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
+...... ........ +...+++......+.++.|.+||+.+++... .+.... .
T Consensus 175 ~~~~~~~-----~~~~~~~~----------~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~----~~~~~~--------~ 227 (353)
T 3vgz_A 175 KLKTAIQ-----NTGKMSTG----------LALDSEGKRLYTTNADGELITIDTADNKILS----RKKLLD--------D 227 (353)
T ss_dssp EEEEEEC-----CCCTTCCC----------CEEETTTTEEEEECTTSEEEEEETTTTEEEE----EEECCC--------S
T ss_pred ceEEEec-----CCCCccce----------EEECCCCCEEEEEcCCCeEEEEECCCCeEEE----EEEcCC--------C
Confidence 5422110 00011111 2223555433334468999999998765421 111100 1
Q ss_pred ccccCeEEEEECCCCcEEEE-e-cCCeEEEEeCCCCCCceeeec
Q psy12356 222 EIISSISDVKISNSGRYMIS-R-DYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~~las-~-~D~tIklWD~~~~~~~l~~~~ 263 (400)
++...+..++|+|||++|+. . .++.|.+||..++. .+..+.
T Consensus 228 ~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~ 270 (353)
T 3vgz_A 228 GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN-ILAKVA 270 (353)
T ss_dssp SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC-EEEEEE
T ss_pred CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEEEE
Confidence 23356788999999997764 3 46999999998764 455554
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-16 Score=149.81 Aligned_cols=98 Identities=6% Similarity=0.010 Sum_probs=68.6
Q ss_pred EEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE
Q psy12356 8 ASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL 87 (400)
Q Consensus 8 ~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ 87 (400)
.++++++++++++++.+++|++||..++ +.++.+..+.. ..+..++|+|++. .+++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~-----------~~~~~~~~~~~-----------~~~~~~~~s~dg~--~~~v 59 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD-----------TVYKSCVMPDK-----------FGPGTAMMAPDNR--TAYV 59 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT-----------EEEEEEECSSC-----------CSSCEEEECTTSS--EEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC-----------cEEEEEecCCC-----------CCCceeEECCCCC--EEEE
Confidence 4678999999999999999999998753 23444443320 1256789999873 4444
Q ss_pred -eeCCCeEEEEEccCCCcc-c--c-------cccEEEEEEecCCCCEEEEEeCC
Q psy12356 88 -STNDQSFNIVDIKPTNME-E--L-------NEVITAAEFHPIDCNLFVYSSSK 130 (400)
Q Consensus 88 -ss~D~tI~lWd~~~~~~~-~--~-------~~~V~sv~f~p~~~~~las~s~D 130 (400)
+..+++|.+||+++++.. . . ...+.+++|+|++ +++++++.+
T Consensus 60 ~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~ 112 (349)
T 1jmx_B 60 LNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG-KEVYATVNP 112 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS-SEEEEEEEE
T ss_pred EeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC-CEEEEEccc
Confidence 456899999999887632 1 1 1126789999986 567776654
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=164.72 Aligned_cols=121 Identities=11% Similarity=0.151 Sum_probs=91.8
Q ss_pred eEEEEEECCCCCeEE----EecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 5 MREASQRFSDGELLA----TGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 5 ~v~~v~fspdG~~La----s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
.|++++|+|||++|| +|+.|++|+|||+.+..............++.+.+|. ..|.+|+|+|+.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~------------~~V~~v~~~p~~ 161 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG------------GMVIDMKWNPTV 161 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG------------GSEEEEEECSSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCC------------CceEEEEECCCC
Confidence 599999999999999 8999999999998642000000000111234556676 459999999973
Q ss_pred CCceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 81 NQAHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 81 ~~~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
+..+++++.|++|+|||++++.. ..|...|++++|+|++ ++|++|+.||+|++||++
T Consensus 162 -~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg-~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 162 -PSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKG-KQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp -TTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTS-SCEEEEETTSCEEEECTT
T ss_pred -CCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCC-CEEEEEcCCCcEEEEccC
Confidence 23677789999999999988752 2356789999999985 789999999999999998
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-15 Score=144.80 Aligned_cols=206 Identities=10% Similarity=0.058 Sum_probs=121.0
Q ss_pred eEEEEEECCCCCeEEEecCC----CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 5 MREASQRFSDGELLATGDKG----GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D----g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
.+..++|||||++|++++.+ +.|++|+++... +..+.+..+..+. ..+..+++ ++
T Consensus 51 ~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~-------g~~~~~~~~~~~~------------~~p~~~~~--dg 109 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK-------GTLHLLNTQKTMG------------ADPCYLTT--NG 109 (361)
T ss_dssp CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT-------TEEEEEEEEECSS------------SCEEEEEE--CS
T ss_pred CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC-------CcEEEeeEeccCC------------CCcEEEEE--CC
Confidence 35678999999999999886 899999987421 2223333333222 12455666 44
Q ss_pred CCceEEEee-CCCeEEEEEccCCC-cccc-----------------cccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 81 NQAHFLLST-NDQSFNIVDIKPTN-MEEL-----------------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 81 ~~~~~l~ss-~D~tI~lWd~~~~~-~~~~-----------------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
. .+++++ .+++|.+|++.... +... ...+.+++|+|++..++++...++.|++|++...
T Consensus 110 ~--~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 110 K--NIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp S--EEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred C--EEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 2 555554 68999999997432 2111 1235789999987445565556899999998765
Q ss_pred cc------cccc-c-ceeccCcccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCC
Q psy12356 142 AL------CDRH-S-KCLIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPE 212 (400)
Q Consensus 142 ~~------~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~ 212 (400)
.. +... . ............. +.++|++. +......++.|++||+.++.... ...+..
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~--~~~~~~-- 253 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRH----------LIFNSDGKFAYLINEIGGTVIAFRYADGMLDE--IQTVAA-- 253 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEE----------EEECTTSSEEEEEETTTCEEEEEEEETTEEEE--EEEEES--
T ss_pred CCcccccceeecccccceecCCCCCCeE----------EEEcCCCCEEEEEcCCCCeEEEEEecCCceEE--eEEEec--
Confidence 21 0000 0 0000000111112 22346654 44444468999999998543210 011100
Q ss_pred CCCCcccccccccCeEEEEECCCCcEEEE-e-c-CCeEEEEeCCC
Q psy12356 213 DPTNKSFFSEIISSISDVKISNSGRYMIS-R-D-YLCVKVWDLHM 254 (400)
Q Consensus 213 ~~~~~~~~~~h~~~V~~v~fSpdg~~las-~-~-D~tIklWD~~~ 254 (400)
...+......++|||||++|+. . . +++|++|++..
T Consensus 254 -------~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~ 291 (361)
T 3scy_A 254 -------DTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDE 291 (361)
T ss_dssp -------CSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECT
T ss_pred -------CCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcC
Confidence 1122345689999999998864 3 4 58999999863
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.4e-17 Score=170.00 Aligned_cols=256 Identities=8% Similarity=0.051 Sum_probs=156.5
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+++|||||++||+++. ++|++||+.++... . ...+..|. ..+..++|+||++ .
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~------~---~~~l~~~~------------~~~~~~~~SPDG~--~ 165 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA------A---VRQLTHGE------------GFATDAKLSPKGG--F 165 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTT------S---CCBCCCSS------------SCEEEEEECTTSS--E
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcc------e---EEEcccCC------------cccccccCCCCCC--E
Confidence 4789999999999999986 99999999864100 0 12344443 3488999999984 4
Q ss_pred EEEeeCCCeEEEEEccCCCcccc----ccc----------------EEEEEEecCCCCEEEEEeCCC-------------
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEEL----NEV----------------ITAAEFHPIDCNLFVYSSSKG------------- 131 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~~----~~~----------------V~sv~f~p~~~~~las~s~Dg------------- 131 (400)
++.++ +++|++||+.+++.... ... +.+++|+||+ +.|++++.|+
T Consensus 166 la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~~~~~~~~~~p 243 (741)
T 2ecf_A 166 VSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPVPVQKRYEVYA 243 (741)
T ss_dssp EEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTSCEEEEEEECS
T ss_pred EEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcCCCCceEecCCCCC
Confidence 55544 67999999988763221 111 4679999986 6778887765
Q ss_pred --------------------eEEEEeccc-ccccccccceeccCcccceeceeccCchhhhhhcccCcceee-----cCC
Q psy12356 132 --------------------TIRLCDMRA-AALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKE-----DNR 185 (400)
Q Consensus 132 --------------------~i~lWD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 185 (400)
.|.+||+.+ +........ ......+.. +.. +++..++ .+.
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~---~~~~~~~~~----------~~~-pDg~~l~~~~~~~~~ 309 (741)
T 2ecf_A 244 DRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLG---KEQDIYLAR----------VNW-RDPQHLSFQRQSRDQ 309 (741)
T ss_dssp SCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCC---SCSSEEEEE----------EEE-EETTEEEEEEEETTS
T ss_pred CcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCC---CCcceEEEE----------EEe-CCCCEEEEEEecccC
Confidence 788999988 642110000 000001111 122 4443222 223
Q ss_pred CCCeEEEeecccccccCcccccccCCCCCCCccccccccc----CeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCcee
Q psy12356 186 RKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS----SISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVE 260 (400)
Q Consensus 186 ~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~----~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~ 260 (400)
.+..|++||+.++... ..+. .+.. .+.+++|||||++++++ .|++++||.+...+. +.
T Consensus 310 ~~~~i~~~d~~~g~~~----~~~~------------~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~ 372 (741)
T 2ecf_A 310 KKLDLVEVTLASNQQR----VLAH------------ETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AA 372 (741)
T ss_dssp SEEEEEEEETTTCCEE----EEEE------------EECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EE
T ss_pred CeEEEEEEECCCCceE----EEEE------------cCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-ee
Confidence 5678999999876431 1111 1111 34689999999987765 578888887663333 55
Q ss_pred eecCCC--------cCCCCccc--CCCCCc--eeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEee
Q psy12356 261 TYPTHT--------KEENGQLR--DPSNIT--ALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEA 324 (400)
Q Consensus 261 ~~~~h~--------~~~~g~~~--~~~~~~--~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~ 324 (400)
.+..|. +.++|+.+ +++.++ .+++|.+... +...+.+. ....+.+++|||||++++.
T Consensus 373 ~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-----g~~~~~l~--~~~~~~~~~~spdg~~l~~ 441 (741)
T 2ecf_A 373 ALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQ-----GGQPQRLS--KAPGMHSASFARNASVYVD 441 (741)
T ss_dssp ESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETT-----CCCCEECC--CSCSEEEEEECTTSSEEEE
T ss_pred eeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcC-----CCCeeecc--cCCCceEEEECCCCCEEEE
Confidence 565553 45788743 233333 7788876422 11112221 2445789999999998874
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.2e-16 Score=141.96 Aligned_cols=93 Identities=13% Similarity=0.171 Sum_probs=65.2
Q ss_pred EecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEc
Q psy12356 20 TGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDI 99 (400)
Q Consensus 20 s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~ 99 (400)
+++.|++|++||+.+++ . ..+..|. ..|.+++|+|++. .++++ .++.|++||+
T Consensus 17 ~~~~~~~i~~~d~~~~~-----------~-~~~~~~~------------~~v~~~~~spdg~--~l~~~-~~~~i~~~d~ 69 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRK-----------M-RVVWQTP------------ELFEAPNWSPDGK--YLLLN-SEGLLYRLSL 69 (297)
T ss_dssp -CCCCEEEEEEETTTTE-----------E-EEEEEES------------SCCEEEEECTTSS--EEEEE-ETTEEEEEES
T ss_pred CCCcceeEEEEeCCCCc-----------e-eeeccCC------------cceEeeEECCCCC--EEEEE-cCCeEEEEeC
Confidence 45689999999997532 1 2344554 3488999999874 44444 5889999999
Q ss_pred cC-CCcc----cc-cccEEEEEEecCCCCEEEEEe--CCCeEEEEeccc
Q psy12356 100 KP-TNME----EL-NEVITAAEFHPIDCNLFVYSS--SKGTIRLCDMRA 140 (400)
Q Consensus 100 ~~-~~~~----~~-~~~V~sv~f~p~~~~~las~s--~Dg~i~lWD~~~ 140 (400)
++ ++.. .+ ...+.+++|+|++ +.|++++ .++..+||+++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 70 AGDPSPEKVDTGFATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp SSCCSCEECCCTTCCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEET
T ss_pred CCCCCceEeccccccccccceEECCCC-CEEEEEEeCCCCcceEEEEEC
Confidence 88 7632 22 2567889999985 6788888 446677776643
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-15 Score=143.83 Aligned_cols=190 Identities=11% Similarity=0.076 Sum_probs=112.3
Q ss_pred CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCC-Ce
Q psy12356 15 GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTND-QS 93 (400)
Q Consensus 15 G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D-~t 93 (400)
..++++++.|++|++|+++.. +..+.+..+ .|. ..+..++|+|+++ .+++++.+ +.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~--------~~~~~~~~~-~~~------------~~~~~~~~spdg~--~l~~~~~~~~~ 61 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHE--------GALTLTQVV-DVP------------GQVQPMVVSPDKR--YLYVGVRPEFR 61 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTT--------SCEEEEEEE-ECS------------SCCCCEEECTTSS--EEEEEETTTTE
T ss_pred EEEEEeCCCCCeEEEEEECCC--------CcEEEeeeE-ecC------------CCCceEEECCCCC--EEEEeecCCCe
Confidence 344555588999999999642 122223222 232 3477899999874 56666654 99
Q ss_pred EEEEEcc--CCCccc-----ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc-ccceeceecc
Q psy12356 94 FNIVDIK--PTNMEE-----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT-NCNCQGLIVP 165 (400)
Q Consensus 94 I~lWd~~--~~~~~~-----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 165 (400)
|++|+++ ++.... ....+..++|+|++..+++++..++.|++||+..+... ....... ......+
T Consensus 62 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~--- 134 (343)
T 1ri6_A 62 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPV----GVVDVVEGLDGCHSA--- 134 (343)
T ss_dssp EEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEE----EEEEEECCCTTBCCC---
T ss_pred EEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccc----cccccccCCCCceEE---
Confidence 9999997 555321 12357889999986434444455899999999422110 0010000 0011112
Q ss_pred CchhhhhhcccCcc-eeecCCCCCeEEEeeccc-ccccCcccc--cccCCCCCCCcccccccccCeEEEEECCCCcEEE-
Q psy12356 166 ESKREERQSSQNRR-EKEDNRRKPAIRLCDMRA-AALCDRHSK--FFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI- 240 (400)
Q Consensus 166 ~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la- 240 (400)
...+++. ...++..++.|++||+.. +.... .. .+.. .....+..++|+|+|++|+
T Consensus 135 -------~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~--~~~~~~~~-----------~~~~~~~~~~~~pdg~~l~~ 194 (343)
T 1ri6_A 135 -------NISPDNRTLWVPALKQDRICLFTVSDDGHLVA--QDPAEVTT-----------VEGAGPRHMVFHPNEQYAYC 194 (343)
T ss_dssp -------EECTTSSEEEEEEGGGTEEEEEEECTTSCEEE--EEEEEEEC-----------STTCCEEEEEECTTSSEEEE
T ss_pred -------EECCCCCEEEEecCCCCEEEEEEecCCCceee--eccccccc-----------CCCCCcceEEECCCCCEEEE
Confidence 2235543 333333689999999986 32210 00 0110 1123678899999999775
Q ss_pred Ee-cCCeEEEEeCCC
Q psy12356 241 SR-DYLCVKVWDLHM 254 (400)
Q Consensus 241 s~-~D~tIklWD~~~ 254 (400)
++ .+++|++||+..
T Consensus 195 ~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 195 VNELNSSVDVWELKD 209 (343)
T ss_dssp EETTTTEEEEEESSC
T ss_pred EeCCCCEEEEEEecC
Confidence 44 579999999964
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=166.00 Aligned_cols=101 Identities=10% Similarity=0.046 Sum_probs=70.5
Q ss_pred eEEEEEECCCCCeEEEecCC---------CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEE
Q psy12356 5 MREASQRFSDGELLATGDKG---------GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 75 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D---------g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~ 75 (400)
.|.+++|||||++||+++.+ +.|+|||+.+++ .+.+....+|. ..+..++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~---------~~~l~~~~~~~------------~~~~~~~ 120 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD---------PQSLDPPEVSN------------AKLQYAG 120 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC---------CEECCCTTCCS------------CCCSBCC
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc---------eEeccCCcccc------------ccccccE
Confidence 37899999999999999864 788899998643 11122222332 2367889
Q ss_pred EEeccCCceEEEeeCCCeEEEEEccCCCcccc----cc------------------cEEEEEEecCCCCEEEEEeCC
Q psy12356 76 WLRRKNQAHFLLSTNDQSFNIVDIKPTNMEEL----NE------------------VITAAEFHPIDCNLFVYSSSK 130 (400)
Q Consensus 76 ~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~~~----~~------------------~V~sv~f~p~~~~~las~s~D 130 (400)
||||++ .++.++ +++|++||+.+++.... .. .+.+++|+||+ +.||+++.|
T Consensus 121 ~SPdG~--~la~~~-~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~ 193 (723)
T 1xfd_A 121 WGPKGQ--QLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAIN 193 (723)
T ss_dssp BCSSTT--CEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEE
T ss_pred ECCCCC--EEEEEE-CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEEC
Confidence 999984 555555 48999999988763211 11 12789999986 678888765
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.71 E-value=2.7e-16 Score=166.52 Aligned_cols=113 Identities=14% Similarity=0.157 Sum_probs=82.8
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
...+++|+|||++|+++ ||+|++||+.+++ ....+.+|+.. . .......++||||++ .
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~-----------~~~~~~~~~~~-----~--~~~~~~~~~~Spdg~--~ 75 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGN-----------SSVFLENSTFD-----E--FGHSINDYSISPDGQ--F 75 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCC-----------EEEEECTTTTT-----T--CCSCCCEEEECTTSS--E
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCc-----------eEEEEechhhh-----h--hcccccceEECCCCC--E
Confidence 45689999999999997 9999999998653 23345666521 0 001134589999984 6
Q ss_pred EEEeeCC---------CeEEEEEccCCCccc---ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 85 FLLSTND---------QSFNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 85 ~l~ss~D---------~tI~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+++++.+ +.+.|||++++++.. +...+..++||||| +.||++ .|+.|.+||+.++
T Consensus 76 l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG-~~la~~-~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 76 ILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVG-HKLAYV-WNNDIYVKIEPNL 142 (740)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSST-TCEEEE-ETTEEEEESSTTS
T ss_pred EEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCC-CEEEEE-ECCeEEEEECCCC
Confidence 6666665 566799999987533 34578999999986 677887 5789999999887
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.68 E-value=9.3e-15 Score=138.22 Aligned_cols=191 Identities=8% Similarity=0.087 Sum_probs=115.4
Q ss_pred EEECCCCCe-EEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE
Q psy12356 9 SQRFSDGEL-LATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL 87 (400)
Q Consensus 9 v~fspdG~~-Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ 87 (400)
..|++++++ +++++.+++|++||..+++ ....+..+. ..+ .++|+|+++ .+++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~-----------~~~~~~~~~------------~~~-~~~~s~dg~--~l~~ 56 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLE-----------ILNQITLGY------------DFV-DTAITSDCS--NVVV 56 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCC-----------EEEEEECCC------------CEE-EEEECSSSC--EEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccc-----------eeeeEEccC------------Ccc-eEEEcCCCC--EEEE
Confidence 457776665 7788899999999987642 233333332 235 899999874 4555
Q ss_pred ee-CCCeEEEEEccCCCc-cc----ccccEEEEEEecCCCCEEEEEeCC-C--eEEEEecccccccccccceeccCcccc
Q psy12356 88 ST-NDQSFNIVDIKPTNM-EE----LNEVITAAEFHPIDCNLFVYSSSK-G--TIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 88 ss-~D~tI~lWd~~~~~~-~~----~~~~V~sv~f~p~~~~~las~s~D-g--~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
++ .++.|.+||+++++. .. ......+++|+|++ ++++++..+ + .|++||+.++....... . ...
T Consensus 57 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~----~--~~~ 129 (331)
T 3u4y_A 57 TSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTIP----I--PYD 129 (331)
T ss_dssp EESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEEE----C--CTT
T ss_pred EeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCCeEEEEE----C--CCC
Confidence 54 589999999988874 21 12233348999986 566644444 3 99999998875422110 0 001
Q ss_pred eeceeccCchhhhhhcccCcc-eeecCCCCCe-EEEeecccccccCcc-cccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 159 CQGLIVPESKREERQSSQNRR-EKEDNRRKPA-IRLCDMRAAALCDRH-SKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~-i~lWD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
...+ ...|++. ..+++..++. |++||+......... .+. + ........++|+||
T Consensus 130 ~~~~----------~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~------------~-~~~~~~~~~~~spd 186 (331)
T 3u4y_A 130 AVGI----------AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEF------------I-SGGTRPFNITFTPD 186 (331)
T ss_dssp EEEE----------EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEE------------E-CSSSSEEEEEECTT
T ss_pred ccce----------EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcc------------c-cCCCCccceEECCC
Confidence 1122 2235553 4444445677 999998753211000 000 0 11245789999999
Q ss_pred CcEEE-Ee-cCCeEEEEeCCCC
Q psy12356 236 GRYMI-SR-DYLCVKVWDLHME 255 (400)
Q Consensus 236 g~~la-s~-~D~tIklWD~~~~ 255 (400)
|++|+ +. .+++|++||+.++
T Consensus 187 g~~l~v~~~~~~~v~v~d~~~~ 208 (331)
T 3u4y_A 187 GNFAFVANLIGNSIGILETQNP 208 (331)
T ss_dssp SSEEEEEETTTTEEEEEECSST
T ss_pred CCEEEEEeCCCCeEEEEECCCC
Confidence 99665 44 5799999999865
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.2e-15 Score=157.96 Aligned_cols=261 Identities=8% Similarity=0.057 Sum_probs=152.5
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|||| ++|+.+. |++|++||+.+++ . ..+..|. ..+.+++|+||++
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~-----------~-~~l~~~~------------~~~~~~~~SpdG~-- 133 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARK-----------V-TYLFDTN------------EETASLDFSPVGD-- 133 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTE-----------E-EEEECCT------------TCCTTCEECTTSS--
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCc-----------e-EEccCCc------------ccccCCcCCCCCC--
Confidence 35899999999 5555543 5999999997532 1 2233333 2367789999874
Q ss_pred eEEEeeCCCeEEEEEccC-----CCccc----cccc--------------EEEEEEecCCCCEEEEEe------------
Q psy12356 84 HFLLSTNDQSFNIVDIKP-----TNMEE----LNEV--------------ITAAEFHPIDCNLFVYSS------------ 128 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~-----~~~~~----~~~~--------------V~sv~f~p~~~~~las~s------------ 128 (400)
.+++ +.|++|++||+.+ ++... .... +.+++|+||+ +.|++++
T Consensus 134 ~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~ 211 (706)
T 2z3z_A 134 RVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIV 211 (706)
T ss_dssp EEEE-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEE
T ss_pred EEEE-EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEee
Confidence 4444 5789999999988 76321 1121 4789999985 7788887
Q ss_pred ---------------------CCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCC
Q psy12356 129 ---------------------SKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRK 187 (400)
Q Consensus 129 ---------------------~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (400)
.+..|++||+.++........ ......+..+ ..+|++..++..+.+
T Consensus 212 ~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~---~~~~~~~~~~----------~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 212 DYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG---EPKEKFLTNL----------SWSPDENILYVAEVN 278 (706)
T ss_dssp ECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC---SCTTCEEEEE----------EECTTSSEEEEEEEC
T ss_pred ccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC---CCCceeEeeE----------EEECCCCEEEEEEeC
Confidence 457899999988743111000 0000111122 223555432222223
Q ss_pred -----CeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC--CCcEEEEe-cCCeEEEEeCCCCCCce
Q psy12356 188 -----PAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN--SGRYMISR-DYLCVKVWDLHMESRPV 259 (400)
Q Consensus 188 -----g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp--dg~~las~-~D~tIklWD~~~~~~~l 259 (400)
..|++||+.++.... ..+.... ......+.+++||| ||++|+++ .|++++||++...+..+
T Consensus 279 ~~~~~~~v~~~d~~~g~~~~---~~~~~~~--------~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~ 347 (706)
T 2z3z_A 279 RAQNECKVNAYDAETGRFVR---TLFVETD--------KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLI 347 (706)
T ss_dssp TTSCEEEEEEEETTTCCEEE---EEEEEEC--------SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEE
T ss_pred CCCCeeEEEEEECCCCceee---EEEEccC--------CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEE
Confidence 489999998762211 0110000 00112346789999 99988865 57899999887333455
Q ss_pred eeecCCC--------cCCCCccc--CCCCCc--eeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeec
Q psy12356 260 ETYPTHT--------KEENGQLR--DPSNIT--ALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEAS 325 (400)
Q Consensus 260 ~~~~~h~--------~~~~g~~~--~~~~~~--~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~ 325 (400)
+.+..|. +.++|+.+ +++.++ ..++|.+.... +.. +.+ .|...+.+++|||||++++..
T Consensus 348 ~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~----~~~-~~l--~~~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 348 RQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG----GKT-KDL--TPESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp EECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC----CCC-EES--CCSSSEEEEEECTTSSEEEEE
T ss_pred EecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC----CCc-eec--cCCCceEEEEECCCCCEEEEE
Confidence 6665553 45677643 222222 24444332111 111 111 255668899999999987643
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=8e-15 Score=141.83 Aligned_cols=204 Identities=11% Similarity=0.009 Sum_probs=117.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcC-CCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRD-PLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~-~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+..++|+|||++|++++.+ +|.+|++. ++ . +..... |... ..+.+++|+|++.
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g---------~--~~~~~~-~~~~----------g~~~~~~~spdg~-- 95 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPT---------E--IVHEAS-HPIG----------GHPRANDADTNTR-- 95 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETT---------E--EEEEEE-EECC----------SSGGGGCTTSCCE--
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCC---------C--EEEeeE-eecC----------CCCccEEECCCCC--
Confidence 46789999999999999888 99999986 32 1 111111 1100 0133467888762
Q ss_pred e-EE-Eee-------------CCCeEEEEEcc-CCCcc----c----ccccEEEEEEecCCCCEEEEEe-CCCeEEEEec
Q psy12356 84 H-FL-LST-------------NDQSFNIVDIK-PTNME----E----LNEVITAAEFHPIDCNLFVYSS-SKGTIRLCDM 138 (400)
Q Consensus 84 ~-~l-~ss-------------~D~tI~lWd~~-~~~~~----~----~~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~ 138 (400)
. ++ ++. .++++++|+++ ++++. . ....+.+++|+|++ ++++++. .++.|++||+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~ 174 (365)
T 1jof_A 96 AIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRK 174 (365)
T ss_dssp EEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEE
T ss_pred EEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCCEEEEEEE
Confidence 2 33 332 68999999997 45531 1 23468899999986 5555554 4789999999
Q ss_pred c-cccccccccceeccCc-ccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeeccc--ccccCccccccc-CCC
Q psy12356 139 R-AAALCDRHSKCLIEGT-NCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRA--AALCDRHSKFFE-EPE 212 (400)
Q Consensus 139 ~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~--~~~~~~~~~~~~-~~~ 212 (400)
. ++++... ..+.... ......+. +++++. +......++.|++|++.. ++.... .+.+. .+.
T Consensus 175 ~~~g~~~~~--~~~~~~~~g~~p~~~~----------~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~-~~~~~~~~~ 241 (365)
T 1jof_A 175 LASGEVELV--GSVDAPDPGDHPRWVA----------MHPTGNYLYALMEAGNRICEYVIDPATHMPVYT-HHSFPLIPP 241 (365)
T ss_dssp CTTSCEEEE--EEEECSSTTCCEEEEE----------ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE-EEEEESSCT
T ss_pred CCCCCEEEe--eeEecCCCCCCCCEeE----------ECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEc-cceEEcCCC
Confidence 8 6633110 0010000 11122222 335653 333444578999998753 321000 00010 010
Q ss_pred CCCCccccccccc------CeEEEE-ECCCCcEEEEe--cCC-----eEEEEeCC
Q psy12356 213 DPTNKSFFSEIIS------SISDVK-ISNSGRYMISR--DYL-----CVKVWDLH 253 (400)
Q Consensus 213 ~~~~~~~~~~h~~------~V~~v~-fSpdg~~las~--~D~-----tIklWD~~ 253 (400)
.+.+|.. .+..++ |||||++|+.+ ++. +|++||+.
T Consensus 242 ------~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 242 ------GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp ------TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred ------CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 0112322 578999 99999988743 233 89999986
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-14 Score=139.72 Aligned_cols=189 Identities=8% Similarity=-0.037 Sum_probs=109.3
Q ss_pred EEECCCCCeEEEecC-CCe--EEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 9 SQRFSDGELLATGDK-GGR--VVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 9 v~fspdG~~Las~s~-Dg~--I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
.+|||||++||.++. +|. |++||+.+++ ......+|.. .+..++|+||+. .+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~-----------~~~lt~~~~~------------~~~~~~~spdg~--~l 95 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV-----------ATQLTEGRGD------------NTFGGFLSPDDD--AL 95 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCE-----------EEECCCSSCB------------CSSSCEECTTSS--EE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCc-----------eEEeeeCCCC------------CccceEEcCCCC--EE
Confidence 789999999999887 674 7778877532 2222333331 133568999875 67
Q ss_pred EEeeCCCeEEEEEccCCCcc----cccccEEEE--EEecCCCCEEEEE----------------------eCCCeEEEEe
Q psy12356 86 LLSTNDQSFNIVDIKPTNME----ELNEVITAA--EFHPIDCNLFVYS----------------------SSKGTIRLCD 137 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~~----~~~~~V~sv--~f~p~~~~~las~----------------------s~Dg~i~lWD 137 (400)
+.++.++.|++||+.+++.. .+...+... .++|++ .+++.. ..+..|.+||
T Consensus 96 ~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 174 (388)
T 3pe7_A 96 FYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVD 174 (388)
T ss_dssp EEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEEEE
Confidence 77788899999999988732 122333333 348875 565532 2457899999
Q ss_pred cccccccccccceeccCcccceeceeccCchhhhhhccc-Ccce--eecCC----CCCeEEEeecccccccCcccccccC
Q psy12356 138 MRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQ-NRRE--KEDNR----RKPAIRLCDMRAAALCDRHSKFFEE 210 (400)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~----~dg~i~lWD~~~~~~~~~~~~~~~~ 210 (400)
+.++.... +... ....... ..+| ++.. ..... ....|.++|+..+.. +.+
T Consensus 175 ~~~g~~~~-----l~~~-~~~~~~~----------~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l-- 231 (388)
T 3pe7_A 175 LKTGESTV-----ILQE-NQWLGHP----------IYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-----RKV-- 231 (388)
T ss_dssp TTTCCEEE-----EEEE-SSCEEEE----------EEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-----EES--
T ss_pred CCCCceEE-----eecC-Ccccccc----------EECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-----EEe--
Confidence 98874311 0000 0011111 2234 4422 22211 133666666654321 111
Q ss_pred CCCCCCcccccccc--cCeEEEEECCCCcEEEE-ec--C---CeEEEEeCCCCC
Q psy12356 211 PEDPTNKSFFSEII--SSISDVKISNSGRYMIS-RD--Y---LCVKVWDLHMES 256 (400)
Q Consensus 211 ~~~~~~~~~~~~h~--~~V~~v~fSpdg~~las-~~--D---~tIklWD~~~~~ 256 (400)
..+. ..+..++|||||+.|+. +. + ..|.+||+.++.
T Consensus 232 ----------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 232 ----------KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp ----------CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred ----------eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 1111 24778999999997763 32 2 249999999864
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-13 Score=131.77 Aligned_cols=211 Identities=9% Similarity=0.025 Sum_probs=125.2
Q ss_pred eEEEEEECCCCCeEEEec-CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELLATGD-KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+..++|+|||++|++++ .+++|++|++... +..+.+..+...... .........+.+++|+|++.
T Consensus 87 ~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~--------g~~~~~~~~~~~~~~---p~~~~~~~~~~~~~~spdg~-- 153 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSANYHKGTAEVMKIAAD--------GALTLTDTVQHSGHG---PRPEQDGSHIHYTDLTPDNR-- 153 (347)
T ss_dssp CCSEEEEETTTTEEEEEETTTTEEEEEEECTT--------SCEEEEEEEECCCCC---SSTTCSSCCEEEEEECTTSC--
T ss_pred CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC--------CCeeecceeecCCCC---CCccccCCCceEEEECCCCc--
Confidence 467899999999998887 7899999999642 122223222211100 00000112377899999873
Q ss_pred eEEEeeCCCeEEEEEcc-CCCccc-------ccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc--ccccccccceecc
Q psy12356 84 HFLLSTNDQSFNIVDIK-PTNMEE-------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA--AALCDRHSKCLIE 153 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~-~~~~~~-------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~--~~~~~~~~~~~~~ 153 (400)
.+++...++.|++||++ ++.+.. .......++|+|++..+++++..++.|++||++. +.+... ..+..
T Consensus 154 l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~--~~~~~ 231 (347)
T 3hfq_A 154 LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQL--GIVKT 231 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEE--EEEES
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEe--eeeee
Confidence 44444568999999998 554321 1225678999998744556666789999999885 321100 00101
Q ss_pred Ccc-----cceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 154 GTN-----CNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 154 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
... ..... +..++++. +.++...++.|++||+...... ..+.. +..+...+
T Consensus 232 ~~~~~~~~~~~~~----------i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~-~~~~~------------~~~~~~~~ 288 (347)
T 3hfq_A 232 IPADYTAHNGAAA----------IRLSHDGHFLYVSNRGYNTLAVFAVTADGHL-TLIQQ------------ISTEGDFP 288 (347)
T ss_dssp SCTTCCSCCEEEE----------EEECTTSCEEEEEEETTTEEEEEEECGGGCE-EEEEE------------EECSSSCC
T ss_pred cCCCCCCCCccee----------EEECCCCCEEEEEeCCCCEEEEEEECCCCcE-EEeEE------------EecCCCCc
Confidence 000 01111 23346664 3445556899999998742110 00011 11233457
Q ss_pred EEEEECCCCcEEEEe--cCCeEEEEeCC
Q psy12356 228 SDVKISNSGRYMISR--DYLCVKVWDLH 253 (400)
Q Consensus 228 ~~v~fSpdg~~las~--~D~tIklWD~~ 253 (400)
..++|||||++|+.+ ++++|++|++.
T Consensus 289 ~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 289 RDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 899999999988754 35899999554
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.59 E-value=7.8e-14 Score=131.35 Aligned_cols=227 Identities=11% Similarity=0.074 Sum_probs=135.0
Q ss_pred eEEEEEECCCCCeE-EEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELL-ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~L-as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+..++|+|||++| ++++.++.|++||+.+++ .+..+...... .+...+..++|+|++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~-----------~~~~~~~~~~~-------~~~~~~~~~~~s~dg~-- 94 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE-----------TLGRIDLSTPE-------ERVKSLFGAALSPDGK-- 94 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCC-----------EEEEEECCBTT-------EEEECTTCEEECTTSS--
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCC-----------eEeeEEcCCcc-------cccccccceEECCCCC--
Confidence 47789999999865 566678999999987642 22233211000 0012356789999874
Q ss_pred eEEEee------------CCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccc
Q psy12356 84 HFLLST------------NDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHS 148 (400)
Q Consensus 84 ~~l~ss------------~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~ 148 (400)
.+++++ .++.|++||+++++.. .....+.+++|+|++ +.++++ ++.|.+||+.+++......
T Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~i~~~d~~~~~~~~~~~ 171 (337)
T 1pby_B 95 TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG-SKLYGL--GRDLHVMDPEAGTLVEDKP 171 (337)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTS-SCEEEE--SSSEEEEETTTTEEEEEEC
T ss_pred EEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCC-CEEEEe--CCeEEEEECCCCcEeeeee
Confidence 555554 5799999999877632 123356788999986 445555 6899999999885422110
Q ss_pred ceeccCcccceeceeccCchhhhhhcccCcc-eeecCCCCC-----------------------eEEEeecccccccCcc
Q psy12356 149 KCLIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKP-----------------------AIRLCDMRAAALCDRH 204 (400)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg-----------------------~i~lWD~~~~~~~~~~ 204 (400)
. ... .......+++. ....+..++ .|.+||+.+++..
T Consensus 172 ~----~~~------------~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--- 232 (337)
T 1pby_B 172 I----QSW------------EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA--- 232 (337)
T ss_dssp S----TTT------------TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE---
T ss_pred c----ccc------------CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce---
Confidence 0 000 00011122221 111111222 5788998875431
Q ss_pred cccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeeecCCC------cCCCCccc-CCC
Q psy12356 205 SKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHT------KEENGQLR-DPS 277 (400)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~~-~~~ 277 (400)
... +..+...+.+++|+|||++|+.+ ++.|++||+.++ ..++.+..+. +.++|+++ .++
T Consensus 233 --~~~----------~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 298 (337)
T 1pby_B 233 --MRE----------VRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKN-ASIKRVPLPHSYYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp --EEE----------EEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTT-EEEEEEECSSCCCEEEECTTSCEEEEES
T ss_pred --Eee----------cCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCC-cCcceecCCCceeeEEECCCCCEEEEEc
Confidence 000 11334567889999999998877 789999999875 3455554321 34566632 234
Q ss_pred CCceeecCcc
Q psy12356 278 NITALRVPQI 287 (400)
Q Consensus 278 ~~~~i~l~~~ 287 (400)
.++.+++|++
T Consensus 299 ~~~~i~v~d~ 308 (337)
T 1pby_B 299 ALGDLAAYDA 308 (337)
T ss_dssp BSSEEEEEET
T ss_pred CCCcEEEEEC
Confidence 4556666654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.9e-13 Score=128.16 Aligned_cols=246 Identities=8% Similarity=0.012 Sum_probs=151.2
Q ss_pred eeeEEEEEECCCCCeEEEecCC------------------------CeEEEEEcCCCCccccCCCCcceeeeeeeccCcc
Q psy12356 3 VYMREASQRFSDGELLATGDKG------------------------GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPE 58 (400)
Q Consensus 3 ~~~v~~v~fspdG~~Las~s~D------------------------g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~ 58 (400)
.+.|.+|+|+|+|+++++.+.+ ++|.+||..+++ +++.+....
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~-----------~~~~~~~~~-- 89 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE-----------ILQSSGKNL-- 89 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC-----------EEEEECTTT--
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe-----------EEeccCCCc--
Confidence 4578999999999999998877 478889886532 222232110
Q ss_pred hhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCC--Cccc------------ccccEEEEEEecCCCCEE
Q psy12356 59 FDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPT--NMEE------------LNEVITAAEFHPIDCNLF 124 (400)
Q Consensus 59 ~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~--~~~~------------~~~~V~sv~f~p~~~~~l 124 (400)
-..+..|++.|+++ .+++...++.|++||.+.. .+.. .....++++|+|++++++
T Consensus 90 ---------~~~p~gia~d~~g~--l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly 158 (329)
T 3fvz_A 90 ---------FYLPHGLSIDTDGN--YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF 158 (329)
T ss_dssp ---------CSSEEEEEECTTSC--EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEE
T ss_pred ---------cCCceEEEECCCCC--EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEE
Confidence 02367899998763 5555567899999998654 2211 112478999999546888
Q ss_pred EEEe-CCCeEEEEecccccccccccceecc-----CcccceeceeccCchhhhhhcccC-cceeecCCCCCeEEEeeccc
Q psy12356 125 VYSS-SKGTIRLCDMRAAALCDRHSKCLIE-----GTNCNCQGLIVPESKREERQSSQN-RREKEDNRRKPAIRLCDMRA 197 (400)
Q Consensus 125 as~s-~Dg~i~lWD~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~i~lWD~~~ 197 (400)
++.+ .++.|++||.. +.........-.. .......++.+ .++ +...+++..++.|++||..+
T Consensus 159 v~d~~~~~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~----------d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 159 VSDGYCNSRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLAL----------VPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EEECSSCCEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEE----------ETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEeCCCCCeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEE----------ECCCCEEEEEECCCCEEEEEECCC
Confidence 8887 69999999944 4322111000000 00001122222 244 55666667789999999885
Q ss_pred ccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe--------cCCeEEEEeCCCCCCceeeecCCCcCC
Q psy12356 198 AALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR--------DYLCVKVWDLHMESRPVETYPTHTKEE 269 (400)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~--------~D~tIklWD~~~~~~~l~~~~~h~~~~ 269 (400)
++.. +.+..+ .+...+..++|+| |..+++. .+.+|++||..++. .+..+..
T Consensus 228 G~~~----~~~~~~----------~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~-~~~~~~~----- 286 (329)
T 3fvz_A 228 KEFV----REIKHA----------SFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGE-IIDVFKP----- 286 (329)
T ss_dssp CCEE----EEECCT----------TTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCC-EEEEECC-----
T ss_pred CcEE----EEEecc----------ccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCe-EEEEEcC-----
Confidence 5432 222111 2345688999999 4433321 23477788776542 3333210
Q ss_pred CCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCE
Q psy12356 270 NGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQET 349 (400)
Q Consensus 270 ~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~ 349 (400)
..+|...+..|+|+|||..
T Consensus 287 -------------------------------------------------------------~~~~~~~p~~ia~~~dG~l 305 (329)
T 3fvz_A 287 -------------------------------------------------------------VRKHFDMPHDIVASEDGTV 305 (329)
T ss_dssp -------------------------------------------------------------SSSCCSSEEEEEECTTSEE
T ss_pred -------------------------------------------------------------CCCccCCeeEEEECCCCCE
Confidence 0123445668999999987
Q ss_pred EEEe-cCCeEEEEeCcc
Q psy12356 350 YLSA-DDLRINLWHLEI 365 (400)
Q Consensus 350 las~-~D~~i~lW~~~~ 365 (400)
+++. .+++|++|+++.
T Consensus 306 yvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 306 YIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEESSSCCEEEEEEEE
T ss_pred EEEECCCCEEEEEeCCc
Confidence 8875 688999999864
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-13 Score=129.87 Aligned_cols=165 Identities=8% Similarity=0.035 Sum_probs=102.2
Q ss_pred ceeeEEEEEeccCCceEEEee-C------CCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEec
Q psy12356 69 EKINKIRWLRRKNQAHFLLST-N------DQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDM 138 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss-~------D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~ 138 (400)
..+..++|+|+++ .+++++ . +++|.+||..+++.. .....+.+++|+|++..++++...++.|.+||+
T Consensus 41 ~~~~~~~~s~dg~--~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 41 KGAYEMAYSQQEN--ALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp SSEEEEEEETTTT--EEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCccceEECCCCC--EEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 3477899999874 555543 2 679999999888732 123346788999987556677777899999999
Q ss_pred ccccccccccceeccC----cccceeceeccCchhhhhhcccCcc-e-eecCCCCCeEEEeecccccccCcccccccCCC
Q psy12356 139 RAAALCDRHSKCLIEG----TNCNCQGLIVPESKREERQSSQNRR-E-KEDNRRKPAIRLCDMRAAALCDRHSKFFEEPE 212 (400)
Q Consensus 139 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~ 212 (400)
.+++............ .......+. ..+++. . ++....++.|.+||+.+++.. ..+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~----~~~---- 180 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELV----------ADDATNTVYISGIGKESVIWVVDGGNIKLK----TAI---- 180 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEE----------EETTTTEEEEEEESSSCEEEEEETTTTEEE----EEE----
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEE----------ECCCCCEEEEEecCCCceEEEEcCCCCceE----EEe----
Confidence 9885432111000000 000011222 234432 2 222245889999999876532 111
Q ss_pred CCCCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeee
Q psy12356 213 DPTNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 213 ~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~ 262 (400)
..+...+..++|+|||++|+. ..++.|.+||+.++. .+..+
T Consensus 181 --------~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~-~~~~~ 222 (353)
T 3vgz_A 181 --------QNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK-ILSRK 222 (353)
T ss_dssp --------CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE-EEEEE
T ss_pred --------cCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe-EEEEE
Confidence 112234678999999998875 468999999999763 44444
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=152.45 Aligned_cols=106 Identities=11% Similarity=0.132 Sum_probs=76.7
Q ss_pred EEEEEeccCCceEEEeeCCCeEEEEEccCCCcccc----cc---cEEEEEEecCCCCEEEEEeC---------CCeEEEE
Q psy12356 73 KIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNMEEL----NE---VITAAEFHPIDCNLFVYSSS---------KGTIRLC 136 (400)
Q Consensus 73 ~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~~~----~~---~V~sv~f~p~~~~~las~s~---------Dg~i~lW 136 (400)
+++|+|++ +++.++.|++|++||+++++.... .. .+.+++||||| ++||+++. |++|++|
T Consensus 20 ~~~~s~dg---~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQ---EYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSS---EEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCC---eEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeecceEEEEE
Confidence 57899987 677777799999999998874321 11 28899999986 77888765 5666666
Q ss_pred ecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCC
Q psy12356 137 DMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTN 216 (400)
Q Consensus 137 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 216 (400)
|+.++ +.... .
T Consensus 96 d~~~g---------------------------------------------------------~~~~~--~---------- 106 (719)
T 1z68_A 96 DLSNG---------------------------------------------------------EFVRG--N---------- 106 (719)
T ss_dssp ETTTT---------------------------------------------------------EECCS--S----------
T ss_pred ECCCC---------------------------------------------------------ccccc--e----------
Confidence 66555 11000 0
Q ss_pred cccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCCC
Q psy12356 217 KSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMES 256 (400)
Q Consensus 217 ~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~ 256 (400)
.....+..++|||||+.||.+.+++|++||+.++.
T Consensus 107 -----~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~ 141 (719)
T 1z68_A 107 -----ELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDP 141 (719)
T ss_dssp -----CCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSC
T ss_pred -----ecCcccccceECCCCCEEEEEECCeEEEEeCCCCC
Confidence 00134678999999999998788999999998764
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.54 E-value=6.4e-13 Score=140.57 Aligned_cols=192 Identities=10% Similarity=0.072 Sum_probs=115.8
Q ss_pred EEEEECCCCCeEEEecCC---------CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 7 EASQRFSDGELLATGDKG---------GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~D---------g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
..++|||||++||.++.+ +.+.|||+.+++ ...+..|. ..+..++||
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~------------~~~l~~~~------------~~~~~~~~S 120 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ------------LITEERIP------------NNTQWVTWS 120 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE------------ECCSSCCC------------TTEEEEEEC
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc------------EEEcccCC------------CcceeeEEC
Confidence 348899999999999876 556799998642 12344443 237889999
Q ss_pred eccCCceEEEeeCCCeEEEEEccCCCcccc-----cccE-----------------EEEEEecCCCCEEEEEeCCCe-EE
Q psy12356 78 RRKNQAHFLLSTNDQSFNIVDIKPTNMEEL-----NEVI-----------------TAAEFHPIDCNLFVYSSSKGT-IR 134 (400)
Q Consensus 78 p~~~~~~~l~ss~D~tI~lWd~~~~~~~~~-----~~~V-----------------~sv~f~p~~~~~las~s~Dg~-i~ 134 (400)
||++ .++.+ .|+.|++||+.++....+ ...+ .++.||||| +.||+++.|.+ ++
T Consensus 121 PdG~--~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~ 196 (740)
T 4a5s_A 121 PVGH--KLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVP 196 (740)
T ss_dssp SSTT--CEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCC
T ss_pred CCCC--EEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCc
Confidence 9984 45544 578999999988763221 1112 348899986 68888887654 99
Q ss_pred EEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccc---ccccCcccccccCC
Q psy12356 135 LCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRA---AALCDRHSKFFEEP 211 (400)
Q Consensus 135 lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~---~~~~~~~~~~~~~~ 211 (400)
+|++....... ... .....+..+ .. +......+|++||+.+ +... . ...+..+
T Consensus 197 ~~~~~~~~~~~-------~~~-~~~~~~~yp----------~~----G~~~~~~~l~v~d~~~~~~~~~~-~-~~~l~~~ 252 (740)
T 4a5s_A 197 LIEYSFYSDES-------LQY-PKTVRVPYP----------KA----GAVNPTVKFFVVNTDSLSSVTNA-T-SIQITAP 252 (740)
T ss_dssp EEEEEECCSTT-------CSS-CEEEEEECC----------BT----TSCCCEEEEEEEETTSCCSSSCC-C-EEEECCC
T ss_pred eEEEEeecCCC-------CCC-CcceeecCC----------CC----cCcCCeeEEEEEECCCCCCCCcc-e-EEEecCC
Confidence 99875431100 000 000001111 00 1111234788899987 5210 0 0111100
Q ss_pred CCCCCcccccccccCeEEEEECCCCcEEEE-ec----CCeEEEEeCCCCC
Q psy12356 212 EDPTNKSFFSEIISSISDVKISNSGRYMIS-RD----YLCVKVWDLHMES 256 (400)
Q Consensus 212 ~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~----D~tIklWD~~~~~ 256 (400)
. .+.+|...+..++|||||++++. .. +..|++||+.++.
T Consensus 253 ~------~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 253 A------SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp H------HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred c------cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 0 01135677999999999997763 22 3589999998864
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.53 E-value=2.2e-12 Score=123.86 Aligned_cols=206 Identities=9% Similarity=-0.023 Sum_probs=110.6
Q ss_pred CCCCCeEEEe----cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE
Q psy12356 12 FSDGELLATG----DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL 87 (400)
Q Consensus 12 spdG~~Las~----s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ 87 (400)
.+...++..| +.++.|++|.++... +..+.+..+ +. ..+..++|+|++. .+++
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~-------g~~~~~~~~--~~------------~~p~~l~~spdg~--~l~~ 66 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEET-------GESLPLSDA--EV------------ANPSYLIPSADGK--FVYS 66 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTT-------CCEEEEEEE--EC------------SCCCSEEECTTSS--EEEE
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCC-------CCEEEeecc--cC------------CCCceEEECCCCC--EEEE
Confidence 3444455555 356789999876421 233333333 22 2366799999874 5566
Q ss_pred eeCC----CeEEEEEccC--CCccc------ccccEEEEEEecCCCCEEEEEe-CCCeEEEEecccccccccccceeccC
Q psy12356 88 STND----QSFNIVDIKP--TNMEE------LNEVITAAEFHPIDCNLFVYSS-SKGTIRLCDMRAAALCDRHSKCLIEG 154 (400)
Q Consensus 88 ss~D----~tI~lWd~~~--~~~~~------~~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~~~~~~~~~~~~~~~~~ 154 (400)
++.+ +.|++|+++. +.++. .......+++ ++ +++++++ .+++|.+||+.....+....... ..
T Consensus 67 ~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~-~~ 142 (361)
T 3scy_A 67 VNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVI-EF 142 (361)
T ss_dssp EECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEE-EC
T ss_pred EEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeE-Ec
Confidence 6554 7999999876 44321 2234566777 54 4444444 68999999997643221110000 00
Q ss_pred cccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccc------cCc--ccccccCCCCCCCccccccccc
Q psy12356 155 TNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAAL------CDR--HSKFFEEPEDPTNKSFFSEIIS 225 (400)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~h~~ 225 (400)
.............+...+...|++. ..+++..++.|++|++..... ... ...... ..+..
T Consensus 143 ~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~~ 211 (361)
T 3scy_A 143 KGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK-----------VAPGS 211 (361)
T ss_dssp CCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-----------CCTTC
T ss_pred cCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee-----------cCCCC
Confidence 0000000000000001123346664 445555688999999875331 000 000000 01224
Q ss_pred CeEEEEECCCCcEEEE-e-cCCeEEEEeCCCC
Q psy12356 226 SISDVKISNSGRYMIS-R-DYLCVKVWDLHME 255 (400)
Q Consensus 226 ~V~~v~fSpdg~~las-~-~D~tIklWD~~~~ 255 (400)
....++|||||++|+. . .+++|++||+.++
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 5678999999998764 4 4799999999854
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.1e-11 Score=114.87 Aligned_cols=237 Identities=11% Similarity=0.139 Sum_probs=139.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE-eccCCc
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL-RRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s-p~~~~~ 83 (400)
.+.+++++|+|+++++...++.|++||.+.. .+..+...... ..+...+..+++. +++
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~------------~~~~~~~~~~~------~~~~~~p~~i~~~~~~g--- 89 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGR------------FKFQFGECGKR------DSQLLYPNRVAVVRNSG--- 89 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTSC------------EEEEECCBSSS------TTCBSSEEEEEEETTTT---
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCCCc------------EEEEecccCCC------cccccCceEEEEEcCCC---
Confidence 5789999999999999888999999997631 12233211100 0011236788885 433
Q ss_pred eEEEee--CCCeEEEEEccCCC-ccc----ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLLST--NDQSFNIVDIKPTN-MEE----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~ss--~D~tI~lWd~~~~~-~~~----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.++++. .++.|++||. +++ ... ....+.+++++|++ +++++...++.|.+||.... ..
T Consensus 90 ~l~v~~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~-~~------------ 154 (286)
T 1q7f_A 90 DIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNGN-VL------------ 154 (286)
T ss_dssp EEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSC-EE------------
T ss_pred eEEEEcCCCCCEEEEECC-CCcEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCCC-EE------------
Confidence 555554 3889999994 444 221 12457899999985 68888878899999996432 00
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
+.+... ++...+..|+++|+|
T Consensus 155 ----------------------------------~~~~~~-------------------------~~~~~p~~i~~~~~g 175 (286)
T 1q7f_A 155 ----------------------------------HKFGCS-------------------------KHLEFPNGVVVNDKQ 175 (286)
T ss_dssp ----------------------------------EEEECT-------------------------TTCSSEEEEEECSSS
T ss_pred ----------------------------------EEeCCC-------------------------CccCCcEEEEECCCC
Confidence 000000 111347889999999
Q ss_pred cEEEEe-cCCeEEEEeCCCCCCceeeecCCC--cCCCCcccCCCCCceeecCcccccceeeccCccceeccc-ccc-ceE
Q psy12356 237 RYMISR-DYLCVKVWDLHMESRPVETYPTHT--KEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANA-HTY-HIN 311 (400)
Q Consensus 237 ~~las~-~D~tIklWD~~~~~~~l~~~~~h~--~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~-~~~-~i~ 311 (400)
+++++. .++.|++||... ..+..+..+. ..|.+ + .+.++. .++... ... .|.
T Consensus 176 ~l~v~~~~~~~i~~~~~~g--~~~~~~~~~g~~~~p~~----------i---~~d~~G--------~l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 176 EIFISDNRAHCVKVFNYEG--QYLRQIGGEGITNYPIG----------V---GINSNG--------EILIADNHNNFNLT 232 (286)
T ss_dssp EEEEEEGGGTEEEEEETTC--CEEEEESCTTTSCSEEE----------E---EECTTC--------CEEEEECSSSCEEE
T ss_pred CEEEEECCCCEEEEEcCCC--CEEEEEccCCccCCCcE----------E---EECCCC--------CEEEEeCCCCEEEE
Confidence 988774 579999999853 3455553321 11110 1 001110 111110 010 121
Q ss_pred EEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEecCCeEEEEeCcc
Q psy12356 312 SISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSADDLRINLWHLEI 365 (400)
Q Consensus 312 ~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~ 365 (400)
.|.++|+.+..-. ...+...+..++|+|||+++++..|++|++|+...
T Consensus 233 --~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 233 --IFTQDGQLISALE----SKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp --EECTTSCEEEEEE----ESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred --EECCCCCEEEEEc----ccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 2334554332110 01122347789999999988886789999999764
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.52 E-value=3.1e-13 Score=138.68 Aligned_cols=147 Identities=7% Similarity=-0.024 Sum_probs=91.1
Q ss_pred ceeeEEEEEeccCCceEEEeeC-CCeEEEEEccCCCcc---ccc-ccEEEEEEecCCCCEEEEEeC---CCeEEEEeccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTN-DQSFNIVDIKPTNME---ELN-EVITAAEFHPIDCNLFVYSSS---KGTIRLCDMRA 140 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~-D~tI~lWd~~~~~~~---~~~-~~V~sv~f~p~~~~~las~s~---Dg~i~lWD~~~ 140 (400)
..|.+++|+||+. ++++++. |++++||++++++.+ .+. ..+.+++|+|+ +++++++. +...+||.+..
T Consensus 22 ~~~~~~~~~~DG~--~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 22 VEKYSLQGVVDGD--KLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp SCEEEEEEEETTT--EEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEET
T ss_pred cchheeecCCCCC--eEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEec
Confidence 3589999999985 6777665 999999999877643 233 46889999996 56666664 56677777654
Q ss_pred --ccccccccceeccCcccceeceeccCchhhhhhcccCc--ceeecCCCCCeEEEeecccccccCcccccccCCCCCCC
Q psy12356 141 --AALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNR--REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTN 216 (400)
Q Consensus 141 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 216 (400)
.... ..+....... ... .++++ .+.++++.++.+ |||+.+++.. .
T Consensus 98 ~~~g~~----~~l~~~~~~~--~~~----------~s~dg~~~~~~s~~~~~~~-l~d~~~g~~~-----~--------- 146 (582)
T 3o4h_A 98 SRPGEE----QRLEAVKPMR--ILS----------GVDTGEAVVFTGATEDRVA-LYALDGGGLR-----E--------- 146 (582)
T ss_dssp TSTTCC----EECTTSCSBE--EEE----------EEECSSCEEEEEECSSCEE-EEEEETTEEE-----E---------
T ss_pred cCCCcc----ccccCCCCce--eee----------eCCCCCeEEEEecCCCCce-EEEccCCcEE-----E---------
Confidence 2100 0111110101 011 12333 344444455554 9999876431 1
Q ss_pred cccccccccCeEEEEECCCCcEEEE-ecC----CeEEEEeCCCC
Q psy12356 217 KSFFSEIISSISDVKISNSGRYMIS-RDY----LCVKVWDLHME 255 (400)
Q Consensus 217 ~~~~~~h~~~V~~v~fSpdg~~las-~~D----~tIklWD~~~~ 255 (400)
+..+.. .+++|||||++||+ +.+ .+|++||+.++
T Consensus 147 ---l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g 185 (582)
T 3o4h_A 147 ---LARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG 185 (582)
T ss_dssp ---EEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC
T ss_pred ---eecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC
Confidence 112222 78999999999994 444 68999998865
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.47 E-value=3.9e-12 Score=132.22 Aligned_cols=110 Identities=7% Similarity=-0.044 Sum_probs=65.2
Q ss_pred eeEEEEEECCCCCeEEEe--cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE--ec
Q psy12356 4 YMREASQRFSDGELLATG--DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL--RR 79 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~--s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s--p~ 79 (400)
..|..++||+++.++++. +.++...||....+. . .+.+..|... +....++..-....|+ ||
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~--------~---~~~l~~~~~~---~~~~~~~~~~~~~~~~~SPD 89 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG--------A---EESALPAPWN---VRNRVFEYSGFPWAGVPRPA 89 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS--------C---EEESSCTTCC---BCCCGGGTCCCCEEEECCSS
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEECCCC--------C---cceeCCCCcc---ccccccccCCccceeeeecC
Confidence 357889999998888887 678999999974321 1 1233334311 0000000001145566 88
Q ss_pred cCCce-EEEee-CCCeEEEEEcc--C-CCc---cc-----ccccEEEEEEecCCCCEEEEEeCC
Q psy12356 80 KNQAH-FLLST-NDQSFNIVDIK--P-TNM---EE-----LNEVITAAEFHPIDCNLFVYSSSK 130 (400)
Q Consensus 80 ~~~~~-~l~ss-~D~tI~lWd~~--~-~~~---~~-----~~~~V~sv~f~p~~~~~las~s~D 130 (400)
++ . ++.++ .+..|.+|++. + +.. .. +...+.+++|+||| +.|++++.|
T Consensus 90 g~--~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg-~~l~~~~~~ 150 (662)
T 3azo_A 90 GG--PLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPER-GEVWCMAEE 150 (662)
T ss_dssp SS--CEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTT-TEEEEEEEE
T ss_pred CC--eEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCC-CEEEEEEec
Confidence 74 5 45444 35667777776 3 442 22 34467899999986 678888765
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.44 E-value=2e-12 Score=122.35 Aligned_cols=115 Identities=10% Similarity=0.053 Sum_probs=75.8
Q ss_pred eEEEEEECCCCCeE-EEecCCCeEEEEEcCCCCccccCCCCcceeeeeee-ccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 5 MREASQRFSDGELL-ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 5 ~v~~v~fspdG~~L-as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.+..++|+|||+++ +++..++.|++||+.+++ ....+. ++.+. .....+..++|+|++.
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~-----------~~~~~~~~~~~~-------~~~~~~~~~~~spdg~- 104 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK-----------NTFHANLSSVPG-------EVGRSMYSFAISPDGK- 104 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTE-----------EEEEEESCCSTT-------EEEECSSCEEECTTSS-
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc-----------EEEEEEcccccc-------cccccccceEECCCCC-
Confidence 46789999999865 466678999999987532 223333 12100 0002266789999874
Q ss_pred ceEEEeeCC------------CeEEEEEccCCCcc------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 83 AHFLLSTND------------QSFNIVDIKPTNME------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 83 ~~~l~ss~D------------~tI~lWd~~~~~~~------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
.+++++.+ ++|.+||+++++.. .....+.+++|+|++ ++++ ++ +.|++||+.+++.
T Consensus 105 -~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~l~~-~~--~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 105 -EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG-SLYV-AG--PDIYKMDVKTGKY 178 (349)
T ss_dssp -EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS-CEEE-ES--SSEEEECTTTCCE
T ss_pred -EEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC-cEEE-cc--CcEEEEeCCCCce
Confidence 56666544 89999999875421 122347788999986 4544 43 3499999988754
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-11 Score=129.97 Aligned_cols=194 Identities=10% Similarity=0.006 Sum_probs=112.3
Q ss_pred eeEEEEEECCCCCeEE-----EecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 4 YMREASQRFSDGELLA-----TGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 4 ~~v~~v~fspdG~~La-----s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
+.+.+++|||||++|| +|+.+.+|++||+.+++. +. ..+-.. .+...++|+|
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~-----------~~--~~~~~~----------~~~~~~~wsp 177 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEW-----------SK--VDVIEG----------GKYATPKWTP 177 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCB-----------CS--SCCBSC----------CTTCCCEECT
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCC-----------cC--CcccCc----------ccccceEEec
Confidence 3688999999999999 667778999999987531 10 011100 0014688999
Q ss_pred ccCCceEEEeeCCCe-------------EEEEEccCCCcc--------cccccEEEEEEecCCCCEEEEEeCCC----eE
Q psy12356 79 RKNQAHFLLSTNDQS-------------FNIVDIKPTNME--------ELNEVITAAEFHPIDCNLFVYSSSKG----TI 133 (400)
Q Consensus 79 ~~~~~~~l~ss~D~t-------------I~lWd~~~~~~~--------~~~~~V~sv~f~p~~~~~las~s~Dg----~i 133 (400)
|+. .++.++.|.+ |++|++.++... .+...+.+++|+|+| +.++.++.++ .|
T Consensus 178 Dg~--~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l 254 (695)
T 2bkl_A 178 DSK--GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDV 254 (695)
T ss_dssp TSS--EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEE
T ss_pred CCC--EEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEE
Confidence 974 6777777665 999999876521 122467899999997 5566655544 56
Q ss_pred EEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeec--CCCCCeEEEeecccccccCcccccccCC
Q psy12356 134 RLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKED--NRRKPAIRLCDMRAAALCDRHSKFFEEP 211 (400)
Q Consensus 134 ~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dg~i~lWD~~~~~~~~~~~~~~~~~ 211 (400)
.+||..++... .+..... .......+ .......+ +..++.|.+||+.++... ..+.+
T Consensus 255 ~~~~~~~~~~~-----~l~~~~~-~~~~~~~~----------~g~l~~~s~~~~~~~~l~~~d~~~~~~~--~~~~l--- 313 (695)
T 2bkl_A 255 YWKRPGEKDFR-----LLVKGVG-AKYEVHAW----------KDRFYVLTDEGAPRQRVFEVDPAKPARA--SWKEI--- 313 (695)
T ss_dssp EEECTTCSSCE-----EEEECSS-CCEEEEEE----------TTEEEEEECTTCTTCEEEEEBTTBCSGG--GCEEE---
T ss_pred EEEcCCCCceE-----EeecCCC-ceEEEEec----------CCcEEEEECCCCCCCEEEEEeCCCCCcc--CCeEE---
Confidence 66655443211 1111000 00000001 11111111 124689999998764310 00111
Q ss_pred CCCCCccccccc-ccCeEEEEECCCCcEEEE-ecCCeEEEEeCC
Q psy12356 212 EDPTNKSFFSEI-ISSISDVKISNSGRYMIS-RDYLCVKVWDLH 253 (400)
Q Consensus 212 ~~~~~~~~~~~h-~~~V~~v~fSpdg~~las-~~D~tIklWD~~ 253 (400)
+..+ ...+.+++|+ +++++++ ..|+..+||.+.
T Consensus 314 --------~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 314 --------VPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp --------ECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred --------ecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 1112 2457888998 6677776 468888888665
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-12 Score=125.71 Aligned_cols=270 Identities=7% Similarity=-0.023 Sum_probs=151.5
Q ss_pred EEEEEECCCCCeEEEecCC---CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 6 REASQRFSDGELLATGDKG---GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.+++|||||++||.+... ..|++||+.+++ ......++.. ....+.|+|++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~-----------~~~l~~~~~~------------~~~~~~~spdg~- 93 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ-----------AVQLTEGKGD------------NTFGGFISTDER- 93 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE-----------EEECCCSSCB------------CTTTCEECTTSS-
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCc-----------EEEeecCCCC------------ccccceECCCCC-
Confidence 5678899999999877543 468888887532 1111112211 122367999874
Q ss_pred ceEEEeeCCCeEEEEEccCCCcccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceece
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGL 162 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (400)
.++.++.++.|++||+.+++....... ...|+|++ +.|+..+.+....+|+....
T Consensus 94 -~l~~~~~~~~l~~~d~~~~~~~~~~~~--~~~~~~~g-~~l~~~~~~~~~~~~~~~~~--------------------- 148 (396)
T 3c5m_A 94 -AFFYVKNELNLMKVDLETLEEQVIYTV--DEEWKGYG-TWVANSDCTKLVGIEILKRD--------------------- 148 (396)
T ss_dssp -EEEEEETTTEEEEEETTTCCEEEEEEC--CTTEEEEE-EEEECTTSSEEEEEEEEGGG---------------------
T ss_pred -EEEEEEcCCcEEEEECCCCCcEEEEec--ccccCCCC-CEEEeccCCccccccccccc---------------------
Confidence 666778888999999988763211100 00155654 56777777777776653111
Q ss_pred eccCchhhhhhcccCcce--ee---cCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC-CC
Q psy12356 163 IVPESKREERQSSQNRRE--KE---DNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN-SG 236 (400)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~--~~---~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp-dg 236 (400)
.+|++.. .. ....+..|.+||+.++... . +..+...+..+.||| ||
T Consensus 149 -----------~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~----~-------------~~~~~~~~~~~~~sp~dg 200 (396)
T 3c5m_A 149 -----------WQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE----V-------------IHQDTAWLGHPIYRPFDD 200 (396)
T ss_dssp -----------CCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE----E-------------EEEESSCEEEEEEETTEE
T ss_pred -----------cCCCCcceeeeeeccCCCcceEEEEECCCCcEE----e-------------eccCCcccccceECCCCC
Confidence 0111111 11 1134678999998765421 0 113345688999999 88
Q ss_pred cEEEE-ecC------CeEEEEeCCCCCCceeeecCC---------CcCCCCcccC-C---CC--CceeecCcccccceee
Q psy12356 237 RYMIS-RDY------LCVKVWDLHMESRPVETYPTH---------TKEENGQLRD-P---SN--ITALRVPQIKPIELTV 294 (400)
Q Consensus 237 ~~las-~~D------~tIklWD~~~~~~~l~~~~~h---------~~~~~g~~~~-~---~~--~~~i~l~~~~~~~~~~ 294 (400)
+.|+. +.+ ..|.+||+..+. ++.+..+ .++|+|+.+. . .. ...+.+|++...+.
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-- 276 (396)
T 3c5m_A 201 STVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-- 276 (396)
T ss_dssp EEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE--
T ss_pred CEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe--
Confidence 87763 322 468888987542 2222211 2568888531 1 11 13477776543221
Q ss_pred ccCccceeccccccceEEEEEcC-CCcEEeecc------------------cchh-----------hccccc--------
Q psy12356 295 EASPRRIFANAHTYHINSISVNS-DQLTVEASP------------------RGIF-----------ADAHTY-------- 336 (400)
Q Consensus 295 ~~~~~~~~~~~~~~~i~~i~~s~-dg~~~~~~~------------------~~~~-----------~~gh~~-------- 336 (400)
..+. . ... .. ..|+| ||++++... ..++ ...|..
T Consensus 277 ----~~l~-~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~ 348 (396)
T 3c5m_A 277 ----EEVM-V-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGD 348 (396)
T ss_dssp ----EEEE-E-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTB
T ss_pred ----EEee-e-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcccccccc
Confidence 1111 0 111 22 78999 999876421 1111 013333
Q ss_pred ---ceeEEEEccCCCEEEEe--cCCeEEEEeCc
Q psy12356 337 ---HISSTSVNSDQETYLSA--DDLRINLWHLE 364 (400)
Q Consensus 337 ---~V~~i~fspDg~~las~--~D~~i~lW~~~ 364 (400)
.+..++|||||+.|+.+ .++...||.++
T Consensus 349 ~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 349 RQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp SSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 25678999999988874 36667777655
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.36 E-value=8.9e-11 Score=113.55 Aligned_cols=114 Identities=15% Similarity=0.131 Sum_probs=76.2
Q ss_pred EEEECCCCCeEEEec----------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 8 ASQRFSDGELLATGD----------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 8 ~v~fspdG~~Las~s----------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
.++|||||++|.++. .+++|.+||..+.+ .+.++...... .........++++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~-----------~~~~i~~~~~~------~~~g~~p~~i~~s 116 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT-----------FEKEISLPPKR------VQGLNYDGLFRQT 116 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC-----------EEEEEEECTTB------CCBCCCGGGEEEC
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc-----------EEEEEEcCccc------cccCCCcceEEEC
Confidence 789999999999886 36789999987532 33333321100 0000124568999
Q ss_pred eccCCceEEEee-C-CCeEEEEEccCCCc-cc-cc-ccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 78 RRKNQAHFLLST-N-DQSFNIVDIKPTNM-EE-LN-EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 78 p~~~~~~~l~ss-~-D~tI~lWd~~~~~~-~~-~~-~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
|++. .++++. . +++|.+||+++++. .. .. .....+.+.|++...+++.+.||.+.+|+...
T Consensus 117 pdg~--~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 117 TDGK--FIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp TTSS--EEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CCCC--EEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 9874 455554 3 68999999988763 22 11 12234667888767889999999999999865
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.3e-10 Score=120.34 Aligned_cols=109 Identities=14% Similarity=0.171 Sum_probs=76.5
Q ss_pred eeEEEEEECCCCCeEEEecCCC-----eEEEEEcCCCCccccCCCCcceeee-eeeccCcchhhcccccccceeeEEEEE
Q psy12356 4 YMREASQRFSDGELLATGDKGG-----RVVIFQRDPLSKTSIPKRGEYNVYS-TFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg-----~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
+.+..++|||||++||.++.++ +|++||+.+++ .+. ++.. .++..++|+
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~-----------~~~~~~~~--------------~~~~~~~ws 179 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK-----------ELPDVLER--------------VKFSCMAWT 179 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE-----------EEEEEEEE--------------ECSCCEEEC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC-----------CCcccccC--------------cccceEEEE
Confidence 4678999999999999765533 89999998642 111 1111 124568999
Q ss_pred eccCCceEEEeeCCCe----------------EEEEEccCCCcc------c--ccccEEEEEEecCCCCEEEEEeC----
Q psy12356 78 RRKNQAHFLLSTNDQS----------------FNIVDIKPTNME------E--LNEVITAAEFHPIDCNLFVYSSS---- 129 (400)
Q Consensus 78 p~~~~~~~l~ss~D~t----------------I~lWd~~~~~~~------~--~~~~V~sv~f~p~~~~~las~s~---- 129 (400)
||+. .++.++.|+. |++|++.+++.. . +...+.+++|+|++ +.|+.++.
T Consensus 180 pDg~--~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~ 256 (710)
T 2xdw_A 180 HDGK--GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG-RYVLLSIREGCD 256 (710)
T ss_dssp TTSS--EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECSSS
T ss_pred eCCC--EEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCC-CEEEEEEEccCC
Confidence 9974 6777766655 999999876521 1 23347789999986 55665553
Q ss_pred -CCeEEEEeccc
Q psy12356 130 -KGTIRLCDMRA 140 (400)
Q Consensus 130 -Dg~i~lWD~~~ 140 (400)
+..|.+||+.+
T Consensus 257 ~~~~l~~~d~~~ 268 (710)
T 2xdw_A 257 PVNRLWYCDLQQ 268 (710)
T ss_dssp SCCEEEEEEGGG
T ss_pred CccEEEEEECcc
Confidence 57899999987
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.33 E-value=7.3e-11 Score=122.54 Aligned_cols=214 Identities=10% Similarity=0.058 Sum_probs=114.0
Q ss_pred EEEEC--CCCCe-EEEecC-CCeEEEEEcC--C-CCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc
Q psy12356 8 ASQRF--SDGEL-LATGDK-GGRVVIFQRD--P-LSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK 80 (400)
Q Consensus 8 ~v~fs--pdG~~-Las~s~-Dg~I~iwd~~--~-~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~ 80 (400)
+..|+ |||++ ||.++. +..|++|++. + +. .+.+..+.. ..+...+..++|+||+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~------------~~~l~~~~~-------~~~~~~~~~~~~spDg 141 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV------------PRPLTPVSA-------VGGGLRWADPVLLPER 141 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC------------CEECSCCCC-------STTCEEEEEEEEETTT
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC------------CEeccCCcc-------CCCCccccCcEECCCC
Confidence 34454 99998 886654 5666666665 2 21 112222100 0001347789999998
Q ss_pred CCceEEEeeCC----------CeEEEEEccC------CCcc----cccccEEEEEEecCCCCEEEEEeCC--------Ce
Q psy12356 81 NQAHFLLSTND----------QSFNIVDIKP------TNME----ELNEVITAAEFHPIDCNLFVYSSSK--------GT 132 (400)
Q Consensus 81 ~~~~~l~ss~D----------~tI~lWd~~~------~~~~----~~~~~V~sv~f~p~~~~~las~s~D--------g~ 132 (400)
+ .+++++.| .+|++||+.+ +..+ .....+.+++|+||| +.|++++.+ ..
T Consensus 142 ~--~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~ 218 (662)
T 3azo_A 142 G--EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEGTE 218 (662)
T ss_dssp T--EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTS-SEEEEEEECTTCCTTTCEE
T ss_pred C--EEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCC-CEEEEEECCCCCCCCCCcE
Confidence 5 66666655 5899999988 5532 223467789999986 677877754 37
Q ss_pred EEEEecc-cccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCC--eEEEeecccccccCccccccc
Q psy12356 133 IRLCDMR-AAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKP--AIRLCDMRAAALCDRHSKFFE 209 (400)
Q Consensus 133 i~lWD~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg--~i~lWD~~~~~~~~~~~~~~~ 209 (400)
|.+||+. ++..... ..+........... ..++++.....+..++ .|.+||+.++... ....
T Consensus 219 i~~~d~~~~g~~~~~--~~l~~~~~~~~~~~----------~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~----~l~~ 282 (662)
T 3azo_A 219 LKTARVTEDGRFADT--RTLLGGPEEAIAQA----------EWAPDGSLIVATDRTGWWNLHRVDPATGAAT----QLCR 282 (662)
T ss_dssp EEEEEECTTSCEEEE--EEEEEETTBCEEEE----------EECTTSCEEEEECTTSSCEEEEECTTTCCEE----ESSC
T ss_pred EEEEEECCCCccccc--EEeCCCCCceEcce----------EECCCCeEEEEECCCCCeEEEEEECCCCcee----eccc
Confidence 9999998 4511000 00100000111112 2235554545555677 5555565443221 1111
Q ss_pred CCCCCCCcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeeec
Q psy12356 210 EPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 210 ~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~ 263 (400)
.+. ..... .-.-.+.+++|+|++++++++.+++++||.+......++.+.
T Consensus 283 ~~~-~~~~p---~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 283 REE-EFAGP---LWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAA 332 (662)
T ss_dssp CSS-BSSCC---CCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECC
T ss_pred ccc-cccCc---cccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEec
Confidence 000 00000 000115679999999998865338999994432222345543
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-10 Score=110.25 Aligned_cols=215 Identities=10% Similarity=0.025 Sum_probs=129.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe-ccCC
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR-RKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp-~~~~ 82 (400)
..+..|+|+|+|+++++...+++|++||.+... ..+.++........ ....-..+..|+++| ++.
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~----------~~~~~~~~~~~~g~---~~~~~~~P~~ia~~~~~g~- 156 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE----------GPLLILGRSMQPGS---DQNHFCQPTDVAVEPSTGA- 156 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSS----------CCSEEESBTTBCCC---STTCCSSEEEEEECTTTCC-
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCe----------EEEEEecccCCCCC---CccccCCCcEEEEeCCCCe-
Confidence 357889999999999999999999999986421 11222311000000 000112478899998 442
Q ss_pred ceEEEee-CCCeEEEEEccCCCc-ccc-------------cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccc
Q psy12356 83 AHFLLST-NDQSFNIVDIKPTNM-EEL-------------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRH 147 (400)
Q Consensus 83 ~~~l~ss-~D~tI~lWd~~~~~~-~~~-------------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~ 147 (400)
.+++.+ .++.|++||.+ +.+ ... .....+++|+|++++++++...++.|++||..+++++...
T Consensus 157 -lyv~d~~~~~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 157 -VFVSDGYCNSRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp -EEEEECSSCCEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred -EEEEeCCCCCeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 444445 58999999954 442 111 1237899999985688888888999999999876443211
Q ss_pred cceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 148 SKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
... ......+.+.+++ +.....++....++..+..|++||..++... ..+. +. .++....
T Consensus 235 ~~~---~~~~~~~~~~~~p----g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~----~~~~-~~--------~~~~~~p 294 (329)
T 3fvz_A 235 KHA---SFGRNVFAISYIP----GFLFAVNGKPYFGDQEPVQGFVMNFSSGEII----DVFK-PV--------RKHFDMP 294 (329)
T ss_dssp CCT---TTTTCEEEEEEET----TEEEEEECCCCTTCSCCCCEEEEETTTCCEE----EEEC-CS--------SSCCSSE
T ss_pred ecc---ccCCCcceeeecC----CEEEEeCCCEEeccCCCcEEEEEEcCCCeEE----EEEc-CC--------CCccCCe
Confidence 000 0011122222221 1111113333344456779999998876542 1221 00 1344668
Q ss_pred EEEEECCCCcEEEE-ecCCeEEEEeCCC
Q psy12356 228 SDVKISNSGRYMIS-RDYLCVKVWDLHM 254 (400)
Q Consensus 228 ~~v~fSpdg~~las-~~D~tIklWD~~~ 254 (400)
..|+|+|||+++++ ..++.|++|++..
T Consensus 295 ~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 295 HDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 89999999987776 4678999999874
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-10 Score=109.02 Aligned_cols=108 Identities=14% Similarity=0.194 Sum_probs=70.0
Q ss_pred eEEEEEECCCCCeEEEecCC---Ce--EEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 5 MREASQRFSDGELLATGDKG---GR--VVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D---g~--I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
.+.+++|||||++||.++.+ +. |++|++.+++ .. .+..+. . +..++|+|+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~-----------~~-~l~~~~------------~-~~~~~wspd 114 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS-----------SK-KILEAK------------N-IRSLEWNED 114 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE-----------EE-EEEEES------------E-EEEEEECTT
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc-----------eE-EEEcCC------------C-ccceeECCC
Confidence 46789999999999988754 34 7777776431 11 121111 2 678999998
Q ss_pred cCCceEEEeeC---------------------------CCeEEEEEccCCCc-cccc-ccEEEEEEecCCCCEEEEEeCC
Q psy12356 80 KNQAHFLLSTN---------------------------DQSFNIVDIKPTNM-EELN-EVITAAEFHPIDCNLFVYSSSK 130 (400)
Q Consensus 80 ~~~~~~l~ss~---------------------------D~tI~lWd~~~~~~-~~~~-~~V~sv~f~p~~~~~las~s~D 130 (400)
+. .++.++. ...|.+||+.+++. +.+. ..+..++|+|++ ++++++.+
T Consensus 115 g~--~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg--~~~~~~~~ 190 (347)
T 2gop_A 115 SR--KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK--IVVNVPHR 190 (347)
T ss_dssp SS--EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE--EEEEEECC
T ss_pred CC--EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe--EEEEEecc
Confidence 74 5666543 25799999988764 3221 156789999985 66666554
Q ss_pred C-------eEEEEecccc
Q psy12356 131 G-------TIRLCDMRAA 141 (400)
Q Consensus 131 g-------~i~lWD~~~~ 141 (400)
+ ..+||.+.++
T Consensus 191 ~~~~~~~~~~~l~~~d~~ 208 (347)
T 2gop_A 191 EIIPQYFKFWDIYIWEDG 208 (347)
T ss_dssp CSSCCSSCCEEEEEEETT
T ss_pred cccccccccccEEEeCCC
Confidence 2 4566666543
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=3.7e-11 Score=115.91 Aligned_cols=204 Identities=11% Similarity=0.042 Sum_probs=117.7
Q ss_pred EEEEEECCCCC--eEEEec-------------CCCeEEEEEcCCCCccccCCCCcceeeeeeec--cCcchhhccccccc
Q psy12356 6 REASQRFSDGE--LLATGD-------------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQS--HEPEFDYLKSLEIE 68 (400)
Q Consensus 6 v~~v~fspdG~--~Las~s-------------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~--h~~~~~~~~~~~~~ 68 (400)
+..++|+|||+ +|++++ .+|++++|+++... . ....+.. |.. .
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g--------~--~~~~~~~~~~~~----------~ 144 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG--------K--LEKNVQNYEYQE----------N 144 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC--------C--EEEEEEEEECCT----------T
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCC--------c--CcceEeeEEeCC----------C
Confidence 34578999999 466664 68999999997421 1 1112221 110 1
Q ss_pred ceeeEEEEEeccCCceEEEee-CCCeEEEEEcc-CCCcc---c-----ccccEEEEEEecCCCCEEEEEe-CCCeEEEEe
Q psy12356 69 EKINKIRWLRRKNQAHFLLST-NDQSFNIVDIK-PTNME---E-----LNEVITAAEFHPIDCNLFVYSS-SKGTIRLCD 137 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss-~D~tI~lWd~~-~~~~~---~-----~~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD 137 (400)
..+..++|+|+++ .++++. .+++|++||++ ++++. . +...+..++|+|++ ++++.++ .+++|++|+
T Consensus 145 ~~~~~~~~spdG~--~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 145 TGIHGMVFDPTET--YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTG-NYLYALMEAGNRICEYV 221 (365)
T ss_dssp CCEEEEEECTTSS--EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTS-SEEEEEETTTTEEEEEE
T ss_pred CcceEEEECCCCC--EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCC-CEEEEEECCCCeEEEEE
Confidence 3478899999874 455544 47899999998 67632 1 13458899999986 5555555 478999998
Q ss_pred cc--cccccccccceeccCc----cc--------ceeceeccCchhhhhhcccCcce-eecCCCC-----CeEEEeeccc
Q psy12356 138 MR--AAALCDRHSKCLIEGT----NC--------NCQGLIVPESKREERQSSQNRRE-KEDNRRK-----PAIRLCDMRA 197 (400)
Q Consensus 138 ~~--~~~~~~~~~~~~~~~~----~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d-----g~i~lWD~~~ 197 (400)
+. ++.+.... ..+..+. .. ....+. +.+|++.. ..+...+ ++|++||+..
T Consensus 222 ~~~~~g~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~i~---------~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~ 291 (365)
T 1jof_A 222 IDPATHMPVYTH-HSFPLIPPGIPDRDPETGKGLYRADVC---------ALTFSGKYMFASSRANKFELQGYIAGFKLRD 291 (365)
T ss_dssp ECTTTCCEEEEE-EEEESSCTTCCCBCTTTSSBSEEEEEE---------EECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred EeCCCCcEEEcc-ceEEcCCCCcCCcccccccccccccEE---------EECCCCCEEEEECCCCCCCCCCeEEEEEECC
Confidence 75 34221000 0011110 00 122222 03466533 2222112 3899999963
Q ss_pred -ccccCcccccccCCCCCCCcccccccccCeEEEEECC---CCcEEEEe-c-CCeEEEEeCCCC
Q psy12356 198 -AALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN---SGRYMISR-D-YLCVKVWDLHME 255 (400)
Q Consensus 198 -~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp---dg~~las~-~-D~tIklWD~~~~ 255 (400)
+... .... .+..+...+..++||| ||++|+.+ . +++|+||++...
T Consensus 292 ~g~~~----~~~~---------~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 292 CGSIE----KQLF---------LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TSCEE----EEEE---------EEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCEE----Eeee---------eeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 3211 0000 0001223456789999 89999865 3 589999999854
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.29 E-value=6.5e-11 Score=114.14 Aligned_cols=66 Identities=12% Similarity=0.240 Sum_probs=49.3
Q ss_pred EEEEeccCCceEEEeeC-CC--eEEEEEccCCCccc----ccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 74 IRWLRRKNQAHFLLSTN-DQ--SFNIVDIKPTNMEE----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 74 v~~sp~~~~~~~l~ss~-D~--tI~lWd~~~~~~~~----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
.+|+||+. .++.++. ++ .|.+||+++++... +...+.+++|+|++ +.|++++.++.|++||+.+++
T Consensus 41 ~~~SpDg~--~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGS--KLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp CCBCTTSC--EEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS-SEEEEEETTTEEEEEETTTCC
T ss_pred ccCCCCCC--EEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC-CEEEEEeCCCeEEEEECCCCc
Confidence 67999874 6666655 66 48888988876432 22233467899985 789999999999999999874
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.26 E-value=2.7e-09 Score=97.40 Aligned_cols=192 Identities=8% Similarity=-0.016 Sum_probs=116.0
Q ss_pred eEEEEEECCCCCeEE-EecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELLA-TGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~La-s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+.+++++|+|++.+ +...++.|.+||..+.. .... . ..+. ..+..+++.|++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~---------~~~~-~-~~~~------------~~p~~i~~~~~g--- 78 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG---------TTVL-P-FNGL------------YQPQGLAVDGAG--- 78 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC--------------EEC-C-CCSC------------CSCCCEEECTTC---
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc---------cceE-e-eCCc------------CCcceeEECCCC---
Confidence 678999999999888 55778999999875421 0000 0 0110 125678888765
Q ss_pred eEEEeeCCCeEEEEEccCCCcccc----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEEL----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~~----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+.++..++.|.+||.+++..... ...+.+++++|++ +++++...++.|.+||..+...... ........
T Consensus 79 ~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~-----~~~~~~~p 152 (270)
T 1rwi_B 79 TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVL-----PFTGLNDP 152 (270)
T ss_dssp CEEEEETTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEEC-----CCCSCCSC
T ss_pred CEEEEcCCCEEEEEeCCCceEeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEee-----ccccCCCc
Confidence 355444488999999876553211 1457899999975 6888877889999998654421100 00000011
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
.++.+ .+++....+...++.|.+||....... ... ..+...+..|+++|+|++.
T Consensus 153 ~~i~~----------~~~g~l~v~~~~~~~i~~~~~~~~~~~-----~~~-----------~~~~~~p~~i~~d~~g~l~ 206 (270)
T 1rwi_B 153 DGVAV----------DNSGNVYVTDTDNNRVVKLEAESNNQV-----VLP-----------FTDITAPWGIAVDEAGTVY 206 (270)
T ss_dssp CCEEE----------CTTCCEEEEEGGGTEEEEECTTTCCEE-----ECC-----------CSSCCSEEEEEECTTCCEE
T ss_pred eeEEE----------eCCCCEEEEECCCCEEEEEecCCCceE-----eec-----------ccCCCCceEEEECCCCCEE
Confidence 12222 234444444445678999987653221 000 0112457899999999887
Q ss_pred EEe-cCCeEEEEeCCC
Q psy12356 240 ISR-DYLCVKVWDLHM 254 (400)
Q Consensus 240 as~-~D~tIklWD~~~ 254 (400)
++. .++.|.+||...
T Consensus 207 v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 207 VTEHNTNQVVKLLAGS 222 (270)
T ss_dssp EEETTTSCEEEECTTC
T ss_pred EEECCCCcEEEEcCCC
Confidence 765 578899998764
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.4e-09 Score=101.21 Aligned_cols=187 Identities=10% Similarity=0.024 Sum_probs=115.3
Q ss_pred EEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
..+++|+|+|+ +++++..++.|++||..++ .+.+..+. ..+..++++|++ .
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-------------~~~~~~~~------------~~~~~l~~~~dg---~ 81 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-------------LSPEMHPS------------HHQNGHCLNKQG---H 81 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-------------EEEEESSC------------SSEEEEEECTTC---C
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-------------eEEEECCC------------CCcceeeECCCC---c
Confidence 56899999999 7888888999999998742 22343333 237889999876 4
Q ss_pred EEEe-eCCCeEEEEEccCCCcccc--------cccEEEEEEecCCCCEEEEEeC-----------------CCeEEEEec
Q psy12356 85 FLLS-TNDQSFNIVDIKPTNMEEL--------NEVITAAEFHPIDCNLFVYSSS-----------------KGTIRLCDM 138 (400)
Q Consensus 85 ~l~s-s~D~tI~lWd~~~~~~~~~--------~~~V~sv~f~p~~~~~las~s~-----------------Dg~i~lWD~ 138 (400)
++++ ..++.|.+||.+++++... ...+++++++|+| +++++.+. .+.|..+|.
T Consensus 82 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 160 (296)
T 3e5z_A 82 LIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP 160 (296)
T ss_dssp EEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT
T ss_pred EEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECC
Confidence 5544 4578999999987774321 1235679999985 77787432 234444444
Q ss_pred ccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecc-cccc-cCcccccccCCCCCCC
Q psy12356 139 RAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMR-AAAL-CDRHSKFFEEPEDPTN 216 (400)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~-~~~~-~~~~~~~~~~~~~~~~ 216 (400)
. +.... +... .....++ ...+++....+++.++.|.+||+. .+.. .. .+.+.
T Consensus 161 ~-g~~~~-----~~~~-~~~~~gi----------~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~--~~~~~------- 214 (296)
T 3e5z_A 161 D-GTLSA-----PIRD-RVKPNGL----------AFLPSGNLLVSDTGDNATHRYCLNARGETEYQ--GVHFT------- 214 (296)
T ss_dssp T-SCEEE-----EECC-CSSEEEE----------EECTTSCEEEEETTTTEEEEEEECSSSCEEEE--EEEEC-------
T ss_pred C-CCEEE-----eecC-CCCCccE----------EECCCCCEEEEeCCCCeEEEEEECCCCcCcCC--CeEee-------
Confidence 3 31100 0000 0011122 223555333555678899999987 2221 00 01110
Q ss_pred cccccccccCeEEEEECCCCcEEEEecCCeEEEEeCC
Q psy12356 217 KSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLH 253 (400)
Q Consensus 217 ~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~ 253 (400)
.+...+..++++|+|++.++. ++.|.+||..
T Consensus 215 -----~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~ 245 (296)
T 3e5z_A 215 -----VEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD 245 (296)
T ss_dssp -----CSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT
T ss_pred -----CCCCCCCeEEECCCCCEEEEc-CCeEEEECCC
Confidence 122445679999999988877 7889999976
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-09 Score=103.60 Aligned_cols=191 Identities=10% Similarity=0.042 Sum_probs=116.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|++..+++.+.++.+++|.-. ....+..+. ..+..++|+|++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~------------~~~~~~~~~~~g~-- 57 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE--------------PWLEISKKG------------LQLEGLNFDRQGQ-- 57 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE--------------EEEEEESSC------------CCEEEEEECTTSC--
T ss_pred cccceeeecCCccceeEEeecccCcccccc--------------eeEEEeccC------------ccccCcEECCCCC--
Confidence 457889999999999998889999999321 123344443 2367889988763
Q ss_pred eEEEeeCCCeEEEEEccCCCccc----ccccEEEEEEecCCCCEEEEEeCC----CeEEEEecccccccccccceeccC-
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEE----LNEVITAAEFHPIDCNLFVYSSSK----GTIRLCDMRAAALCDRHSKCLIEG- 154 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~----~~~~V~sv~f~p~~~~~las~s~D----g~i~lWD~~~~~~~~~~~~~~~~~- 154 (400)
.++++..++.|.+||.++++... ....+.+++|+|++ ++++++..+ +.|.+||..++..... +...
T Consensus 58 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~----~~~~~ 132 (333)
T 2dg1_A 58 LFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDI----IEDLS 132 (333)
T ss_dssp EEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEE----ECSSS
T ss_pred EEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEE----EccCc
Confidence 34456678999999998877432 33568999999985 677777666 6899999887743110 0000
Q ss_pred cccceeceeccCchhhhhhcccCcceeecCCC------CCeEEEeecccccccCcccccccCCCCCCCcccccccccCeE
Q psy12356 155 TNCNCQGLIVPESKREERQSSQNRREKEDNRR------KPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
.......+.+ .+++....+... .+.|..+|...+.. ..+ ..+...+.
T Consensus 133 ~~~~~~~i~~----------d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-----~~~------------~~~~~~~~ 185 (333)
T 2dg1_A 133 TAYCIDDMVF----------DSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-----TPI------------IQNISVAN 185 (333)
T ss_dssp SCCCEEEEEE----------CTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-----EEE------------EEEESSEE
T ss_pred cCCcccceEE----------CCCCCEEEEeccccccCCCceEEEEeCCCCEE-----EEe------------ecCCCccc
Confidence 0111122222 234433332221 23344444332211 000 11223578
Q ss_pred EEEECCCCcEEE-E-ecCCeEEEEeCCC
Q psy12356 229 DVKISNSGRYMI-S-RDYLCVKVWDLHM 254 (400)
Q Consensus 229 ~v~fSpdg~~la-s-~~D~tIklWD~~~ 254 (400)
.++|+|||++|. + ..++.|.+||+.+
T Consensus 186 ~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 186 GIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 899999998654 4 3478999999975
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.23 E-value=7.4e-10 Score=105.08 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=61.6
Q ss_pred eEEEEEECCCCCeEEEec---------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEE
Q psy12356 5 MREASQRFSDGELLATGD---------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 75 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s---------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~ 75 (400)
.+..++| ||++||... .++.|++||+.+++ . +.+ . .+..++
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~---------~---~~l--~--------------~~~~~~ 65 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA---------R---RFI--E--------------NATMPR 65 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC---------E---EEE--E--------------SCEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc---------e---EEc--c--------------cCCCeE
Confidence 4677888 999998752 26789999987532 1 122 1 256789
Q ss_pred EEeccCCceEEEeeCC---C--eEEEEEccCCCccc---ccccEEEEEEecCCCCEEEEEeCC
Q psy12356 76 WLRRKNQAHFLLSTND---Q--SFNIVDIKPTNMEE---LNEVITAAEFHPIDCNLFVYSSSK 130 (400)
Q Consensus 76 ~sp~~~~~~~l~ss~D---~--tI~lWd~~~~~~~~---~~~~V~sv~f~p~~~~~las~s~D 130 (400)
|+||+. .++..+.+ + .|.+||+++++... ... +.+++|+|++ +.|++++.+
T Consensus 66 ~SpDg~--~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg-~~l~~~~~~ 124 (347)
T 2gop_A 66 ISPDGK--KIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDS-RKLLIVGFK 124 (347)
T ss_dssp ECTTSS--EEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTS-SEEEEEEEC
T ss_pred ECCCCC--EEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCC-CEEEEEEcc
Confidence 999984 56655432 3 47778888776322 233 8899999986 677777654
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-09 Score=114.65 Aligned_cols=110 Identities=16% Similarity=0.133 Sum_probs=74.0
Q ss_pred eeEEEEEECCCCCeEEEecCC-----CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 4 YMREASQRFSDGELLATGDKG-----GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
+.+..++|||||++||.++.+ .+|++||+.+++ .+. ...+. .++..++|+|
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~-----------~~~-~~~~~------------~~~~~~~wsp 218 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK-----------PLA-DELKW------------VKFSGLAWLG 218 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC-----------EEE-EEEEE------------EESCCCEEST
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC-----------CCC-ccCCC------------ceeccEEEEC
Confidence 367899999999999987643 469999998653 111 11111 1134688999
Q ss_pred ccCCceEEEeeCCC--------------eEEEEEccCCCcc------c--ccccEEEEEEecCCCCEEEEEeCC-----C
Q psy12356 79 RKNQAHFLLSTNDQ--------------SFNIVDIKPTNME------E--LNEVITAAEFHPIDCNLFVYSSSK-----G 131 (400)
Q Consensus 79 ~~~~~~~l~ss~D~--------------tI~lWd~~~~~~~------~--~~~~V~sv~f~p~~~~~las~s~D-----g 131 (400)
| . .++.++.|. .|++|++.++... . +...+.++.|+|+| +.++..+.+ .
T Consensus 219 D-~--~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~ 294 (741)
T 1yr2_A 219 N-D--ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDG-RWVVITSSEGTDPVN 294 (741)
T ss_dssp T-S--EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECTTCSCC
T ss_pred C-C--EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCC-CEEEEEEEccCCCcc
Confidence 8 5 677666544 3899998766421 1 11247899999986 566666544 3
Q ss_pred eEEEEecccc
Q psy12356 132 TIRLCDMRAA 141 (400)
Q Consensus 132 ~i~lWD~~~~ 141 (400)
.|.+||+.++
T Consensus 295 ~l~~~d~~~~ 304 (741)
T 1yr2_A 295 TVHVARVTNG 304 (741)
T ss_dssp EEEEEEEETT
T ss_pred eEEEEECCCC
Confidence 8999999876
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=5.6e-09 Score=96.47 Aligned_cols=195 Identities=8% Similarity=0.092 Sum_probs=120.6
Q ss_pred eEEEEEE-CCCCCeEEEecC-CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 5 MREASQR-FSDGELLATGDK-GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 5 ~v~~v~f-spdG~~Las~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.+..++| .++|+++++... ++.|++||.+. +.+..+.... ...+..+++.|++.
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g------------~~~~~~~~~~-----------~~~~~~i~~~~~g~- 133 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG------------QFVRKFGATI-----------LQHPRGVTVDNKGR- 133 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECTTS------------CEEEEECTTT-----------CSCEEEEEECTTSC-
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEECCCC------------cEEEEecCcc-----------CCCceEEEEeCCCC-
Confidence 5788999 588888887743 89999999542 1223332111 02377899988763
Q ss_pred ceEEEeeCCCeEEEEEccCCCccc-----ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc-c
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNMEE-----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT-N 156 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~~-----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~-~ 156 (400)
.+++...++.|++||.+...... ....+.+++++|++ +++++.+.++.|++||.....+ .. +.... .
T Consensus 134 -l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~~~-~~----~~~~g~~ 206 (286)
T 1q7f_A 134 -IIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYEGQYL-RQ----IGGEGIT 206 (286)
T ss_dssp -EEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETTCCEE-EE----ESCTTTS
T ss_pred -EEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCC-CEEEEECCCCEEEEEcCCCCEE-EE----EccCCcc
Confidence 44445668999999975433221 22357899999985 6888888899999999754311 11 00000 0
Q ss_pred cceeceeccCchhhhhhcccCcceeecCCCCC-eEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNRREKEDNRRKP-AIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg-~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
....++.+ .+++...+++..++ .|++||... .. ...+..+ .....+.+++|+|+
T Consensus 207 ~~p~~i~~----------d~~G~l~v~~~~~~~~i~~~~~~g-~~----~~~~~~~----------~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 207 NYPIGVGI----------NSNGEILIADNHNNFNLTIFTQDG-QL----ISALESK----------VKHAQCFDVALMDD 261 (286)
T ss_dssp CSEEEEEE----------CTTCCEEEEECSSSCEEEEECTTS-CE----EEEEEES----------SCCSCEEEEEEETT
T ss_pred CCCcEEEE----------CCCCCEEEEeCCCCEEEEEECCCC-CE----EEEEccc----------CCCCcceeEEECCC
Confidence 11122222 24555555555565 999999542 21 1122111 11134678999999
Q ss_pred CcEEEEecCCeEEEEeCCCC
Q psy12356 236 GRYMISRDYLCVKVWDLHME 255 (400)
Q Consensus 236 g~~las~~D~tIklWD~~~~ 255 (400)
|+++++..|++|++|++...
T Consensus 262 g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 262 GSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp TEEEEEETTTEEEEEECSCC
T ss_pred CcEEEECCCCeEEEEEcccc
Confidence 99888877899999998753
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.14 E-value=1.5e-08 Score=94.45 Aligned_cols=198 Identities=10% Similarity=0.117 Sum_probs=115.1
Q ss_pred EEEEEECCCCCeEEE-------ecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 6 REASQRFSDGELLAT-------GDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 6 v~~v~fspdG~~Las-------~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
+.+++|+++|+++++ +..++.|.+||..+++ . ..+..... ......+..+++.|
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~---------~---~~~~~~~~-------~~~~~~~~~i~~~~ 80 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK---------K---TVICKPEV-------NGYGGIPAGCQCDR 80 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC---------E---EEEECCEE-------TTEECCEEEEEECS
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc---------E---EEEEeccc-------CCCCCCCceEEEec
Confidence 568999999998888 6778999999976532 1 11211000 00113477889988
Q ss_pred c-cCCceEEEeeCCCeEEEEEccCCCcccc---------cccEEEEEEecCCCCEEEEEeCC---------------CeE
Q psy12356 79 R-KNQAHFLLSTNDQSFNIVDIKPTNMEEL---------NEVITAAEFHPIDCNLFVYSSSK---------------GTI 133 (400)
Q Consensus 79 ~-~~~~~~l~ss~D~tI~lWd~~~~~~~~~---------~~~V~sv~f~p~~~~~las~s~D---------------g~i 133 (400)
+ + .+.++..+..|.+||.+ +++... ...+++++++|++ +++++...+ +.|
T Consensus 81 ~~g---~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l 155 (314)
T 1pjx_A 81 DAN---QLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSI 155 (314)
T ss_dssp SSS---EEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEE
T ss_pred CCC---cEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeE
Confidence 7 4 55655545578899987 664222 1247899999985 677776655 566
Q ss_pred EEEecccccccccccceeccCcccceeceeccCchhhhhhcc----cCc-ceeecCCCCCeEEEeecc-cccccCccccc
Q psy12356 134 RLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSS----QNR-REKEDNRRKPAIRLCDMR-AAALCDRHSKF 207 (400)
Q Consensus 134 ~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~dg~i~lWD~~-~~~~~~~~~~~ 207 (400)
..||.. +.... +... .....++ ... +++ ....+...++.|.+||+. .+.... ...
T Consensus 156 ~~~~~~-g~~~~-----~~~~-~~~~~~i----------~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~--~~~ 216 (314)
T 1pjx_A 156 YCFTTD-GQMIQ-----VDTA-FQFPNGI----------AVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN--KKV 216 (314)
T ss_dssp EEECTT-SCEEE-----EEEE-ESSEEEE----------EEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE--EEE
T ss_pred EEECCC-CCEEE-----eccC-CCCcceE----------EEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc--ceE
Confidence 667655 32110 0000 0001111 112 343 333444457899999986 222100 001
Q ss_pred ccCCCCCCCcccccccc-cCeEEEEECCCCcEEEEe-cCCeEEEEeCCCC
Q psy12356 208 FEEPEDPTNKSFFSEII-SSISDVKISNSGRYMISR-DYLCVKVWDLHME 255 (400)
Q Consensus 208 ~~~~~~~~~~~~~~~h~-~~V~~v~fSpdg~~las~-~D~tIklWD~~~~ 255 (400)
+.. +.++. .....++++|+|++.++. .++.|.+||..++
T Consensus 217 ~~~---------~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 217 WGH---------IPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp EEE---------CCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred EEE---------CCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence 100 11222 446789999999988875 6789999988753
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.4e-09 Score=104.67 Aligned_cols=200 Identities=11% Similarity=0.082 Sum_probs=108.7
Q ss_pred EEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCc---chhhccccccc----ceeeEEEEEeccC
Q psy12356 9 SQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEP---EFDYLKSLEIE----EKINKIRWLRRKN 81 (400)
Q Consensus 9 v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~---~~~~~~~~~~~----~~V~~v~~sp~~~ 81 (400)
+.|||||++||.++.++.|++||+.+++ ....+..+.. ....+.-.... .....+.|+|++.
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~-----------~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~ 154 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLE-----------EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS 154 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCC-----------EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCC-----------cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCc
Confidence 6799999999999999999999987643 1111222211 00000000000 0000134667653
Q ss_pred CceEEEe-----eCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCC------CeEEEEecccccccccc
Q psy12356 82 QAHFLLS-----TNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSK------GTIRLCDMRAAALCDRH 147 (400)
Q Consensus 82 ~~~~l~s-----s~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~D------g~i~lWD~~~~~~~~~~ 147 (400)
.++.. ..+..|.+||+.+++.. .....+..+.|+|+++..|+.++.+ ..|.+||+.++....
T Consensus 155 --~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-- 230 (396)
T 3c5m_A 155 --WEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-- 230 (396)
T ss_dssp --HHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE--
T ss_pred --ceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE--
Confidence 33332 35678999999888743 2334688999999324566666553 358888876653110
Q ss_pred cceeccCc-ccceeceeccCchhhhhhcccCcc--eeec---CCCCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 148 SKCLIEGT-NCNCQGLIVPESKREERQSSQNRR--EKED---NRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 148 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
+.... ...+..+. .+|++. +.++ +..++.|.+||+.++... .+ .
T Consensus 231 ---l~~~~~~~~~~~~~----------~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-----~l------------~ 280 (396)
T 3c5m_A 231 ---IKEHAEGESCTHEF----------WIPDGSAMAYVSYFKGQTDRVIYKANPETLENE-----EV------------M 280 (396)
T ss_dssp ---SSCCCTTEEEEEEE----------ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE-----EE------------E
T ss_pred ---eeccCCCccccceE----------ECCCCCEEEEEecCCCCccceEEEEECCCCCeE-----Ee------------e
Confidence 10000 00111122 234443 2221 112245999999765421 00 0
Q ss_pred ccccCeEEEEECC-CCcEEEEe-----------------cCCeEEEEeCCCC
Q psy12356 222 EIISSISDVKISN-SGRYMISR-----------------DYLCVKVWDLHME 255 (400)
Q Consensus 222 ~h~~~V~~v~fSp-dg~~las~-----------------~D~tIklWD~~~~ 255 (400)
.. .... +.|+| ||++++.+ ++..|.+||+.++
T Consensus 281 ~~-~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 281 VM-PPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EC-CSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred eC-CCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 00 1123 89999 99988752 2478999999865
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.10 E-value=4.4e-08 Score=92.36 Aligned_cols=197 Identities=11% Similarity=0.100 Sum_probs=116.7
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+.+++|+|||++++++..++.|++||..+++ +...+..+. ..+.+++|+|++. .
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~-----------~~~~~~~~~------------~~~~~i~~~~dg~--l 100 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKE-----------IKRPFVSHK------------ANPAAIKIHKDGR--L 100 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCC-----------EEEEEECSS------------SSEEEEEECTTSC--E
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCCc-----------EEEEeeCCC------------CCcceEEECCCCc--E
Confidence 35789999999988888899999999987532 111111222 3488899998763 3
Q ss_pred EEEeeCC----CeEEEEEccCCCccc------ccccEEEEEEecCCCCEEEEEeC------CCeEEEEeccccccccccc
Q psy12356 85 FLLSTND----QSFNIVDIKPTNMEE------LNEVITAAEFHPIDCNLFVYSSS------KGTIRLCDMRAAALCDRHS 148 (400)
Q Consensus 85 ~l~ss~D----~tI~lWd~~~~~~~~------~~~~V~sv~f~p~~~~~las~s~------Dg~i~lWD~~~~~~~~~~~ 148 (400)
+++...+ +.|.+||.+++.+.. ....+++++++|++ +++++... .+.|..+|..++....
T Consensus 101 ~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~--- 176 (333)
T 2dg1_A 101 FVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTP--- 176 (333)
T ss_dssp EEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEE---
T ss_pred EEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEEE---
Confidence 4444445 689999998776431 22458899999985 67776654 2455555554432110
Q ss_pred ceeccCcccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeeccc-ccccCccc-ccccCCCCCCCccccccccc
Q psy12356 149 KCLIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRA-AALCDRHS-KFFEEPEDPTNKSFFSEIIS 225 (400)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~h~~ 225 (400)
+... .....++. ..+++. .......++.|.+||++. +....... ..+. . +.++ .
T Consensus 177 --~~~~-~~~~~~i~----------~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~--------~-~~~~-~ 233 (333)
T 2dg1_A 177 --IIQN-ISVANGIA----------LSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPY--------Y-FTGH-E 233 (333)
T ss_dssp --EEEE-ESSEEEEE----------ECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE--------E-CCSS-S
T ss_pred --eecC-CCcccceE----------ECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEE--------e-cCCC-C
Confidence 0000 00111122 224442 333334578999999863 21110000 0000 0 0112 3
Q ss_pred CeEEEEECCCCcEEEEe-cCCeEEEEeCC
Q psy12356 226 SISDVKISNSGRYMISR-DYLCVKVWDLH 253 (400)
Q Consensus 226 ~V~~v~fSpdg~~las~-~D~tIklWD~~ 253 (400)
.+..++++|+|++.++. .++.|.+||..
T Consensus 234 ~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 234 GPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 57789999999988765 57899999984
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=4.6e-07 Score=83.30 Aligned_cols=193 Identities=8% Similarity=0.009 Sum_probs=117.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..+.+++++|+|++.++...++.|.+||.. +. . ..+..... ...+..+++.+++.
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~---------~---~~~~~~~~----------~~~~~~i~~~~~g~-- 69 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GK---------I---TEYPLPTP----------DAKVMCLTISSDGE-- 69 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CC---------E---EEEECSST----------TCCEEEEEECTTSC--
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CC---------e---EEecCCcc----------cCceeeEEECCCCC--
Confidence 358899999999988887778999999986 32 1 11211100 12477888887652
Q ss_pred eEEEeeCCCeEEEEEccCCCccc-----ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEE-----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~-----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++...++.|..||.+ +.... ....+.+++++|++ .++++...++.|..||. ++..... ........
T Consensus 70 l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~----~~~~~~~~ 142 (299)
T 2z2n_A 70 VWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREY----ELPNKGSY 142 (299)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEE----ECSSTTCC
T ss_pred EEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEe----cCCCCCCC
Confidence 44444557889999976 44321 22357899999975 77787777889999998 4422100 00000011
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
...+.+ .+++....+...++.|..||. ++... .+..+ .+...+..++++|+|++
T Consensus 143 ~~~i~~----------~~~g~l~v~~~~~~~i~~~~~-~g~~~-----~~~~~----------~~~~~~~~i~~~~~g~l 196 (299)
T 2z2n_A 143 PSFITL----------GSDNALWFTENQNNAIGRITE-SGDIT-----EFKIP----------TPASGPVGITKGNDDAL 196 (299)
T ss_dssp EEEEEE----------CTTSCEEEEETTTTEEEEECT-TCCEE-----EEECS----------STTCCEEEEEECTTSSE
T ss_pred CceEEE----------cCCCCEEEEeCCCCEEEEEcC-CCcEE-----EeeCC----------CCCCcceeEEECCCCCE
Confidence 112211 234444444445678888887 43221 11111 12245789999999998
Q ss_pred EEEe-cCCeEEEEeCCCC
Q psy12356 239 MISR-DYLCVKVWDLHME 255 (400)
Q Consensus 239 las~-~D~tIklWD~~~~ 255 (400)
.++. .++.|.+||. ++
T Consensus 197 ~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 197 WFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp EEEETTTTEEEEECT-TC
T ss_pred EEEccCCceEEEECC-CC
Confidence 7765 4789999999 54
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.05 E-value=7.6e-08 Score=89.34 Aligned_cols=193 Identities=12% Similarity=0.111 Sum_probs=118.8
Q ss_pred CCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCC
Q psy12356 13 SDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQ 92 (400)
Q Consensus 13 pdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~ 92 (400)
..|++|++++.|+.|++||.+++ +.+-.+..+.. ..+.++.++|++ .+++ +.++
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG-----------~~~w~~~~~~~-----------~~~~~~~~~pdG---~ilv-s~~~ 56 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTK-----------EIVWEYPLEKG-----------WECNSVAATKAG---EILF-SYSK 56 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTT-----------EEEEEEECCTT-----------CCCCEEEECTTS---CEEE-ECBS
T ss_pred CCCcEEEeeCCCCEEEEEECCCC-----------eEEEEeCCCcc-----------CCCcCeEECCCC---CEEE-eCCC
Confidence 45689999999999999998654 23445554431 136778899876 4555 5578
Q ss_pred eEEEEEccCCCc----ccc-cccEEEEEEecCCCCEEEEEeC-CCeEEEEecccccccccccceeccCcccceeceeccC
Q psy12356 93 SFNIVDIKPTNM----EEL-NEVITAAEFHPIDCNLFVYSSS-KGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPE 166 (400)
Q Consensus 93 tI~lWd~~~~~~----~~~-~~~V~sv~f~p~~~~~las~s~-Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (400)
.|+.||. +|+. ... ...+.++++.|++ +++++.+. ++.|..+|. +++++.... ..........
T Consensus 57 ~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~-~Gk~l~~~~--~~~~~~~~~~------ 125 (276)
T 3no2_A 57 GAKMITR-DGRELWNIAAPAGCEMQTARILPDG-NALVAWCGHPSTILEVNM-KGEVLSKTE--FETGIERPHA------ 125 (276)
T ss_dssp EEEEECT-TSCEEEEEECCTTCEEEEEEECTTS-CEEEEEESTTEEEEEECT-TSCEEEEEE--ECCSCSSGGG------
T ss_pred CEEEECC-CCCEEEEEcCCCCccccccEECCCC-CEEEEecCCCCEEEEEeC-CCCEEEEEe--ccCCCCcccc------
Confidence 8999998 5652 111 2357889999985 67787776 788888886 443322110 0000000000
Q ss_pred chhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCC
Q psy12356 167 SKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYL 245 (400)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~ 245 (400)
....+...+++..+++...++.|..||.. ++.. ..+.. .....++.+.|+|++++++ .++
T Consensus 126 -~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~----w~~~~-------------~~~~~~~~~~~~g~~~v~~~~~~ 186 (276)
T 3no2_A 126 -QFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL----NSVKL-------------SGTPFSSAFLDNGDCLVACGDAH 186 (276)
T ss_dssp -SCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE----EEEEC-------------SSCCCEEEECTTSCEEEECBTTS
T ss_pred -cccCceECCCCCEEEEecCCCEEEEECCC-CCEE----EEEEC-------------CCCccceeEcCCCCEEEEeCCCC
Confidence 00011123455555556678999999987 5431 11111 1245568889999998875 457
Q ss_pred eEEEEeCCCCCCceeee
Q psy12356 246 CVKVWDLHMESRPVETY 262 (400)
Q Consensus 246 tIklWD~~~~~~~l~~~ 262 (400)
.|..+|..++. .+-++
T Consensus 187 ~v~~~d~~tG~-~~w~~ 202 (276)
T 3no2_A 187 CFVQLNLESNR-IVRRV 202 (276)
T ss_dssp EEEEECTTTCC-EEEEE
T ss_pred eEEEEeCcCCc-EEEEe
Confidence 89999998764 45554
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.8e-07 Score=88.85 Aligned_cols=189 Identities=10% Similarity=0.032 Sum_probs=115.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+..+.++ ++++.++...+++|.+||..+.+ .++++... ..+..++++|++ +
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~-----------~~~~i~~~-------------~~p~~i~~~~~g---~ 96 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK-----------EVGRITGF-------------TSPRYIHFLSDE---K 96 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC-----------EEEEEECC-------------SSEEEEEEEETT---E
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccE-----------EEEEcCCC-------------CCCcEEEEeCCC---e
Confidence 35677774 45666667778999999998642 34445322 236788998875 4
Q ss_pred EEEee-CCCeEEEEEccCCCccc---ccc------cEEEEEEecCCCCEEEEEe-CCCeEEEEecccccccccccceecc
Q psy12356 85 FLLST-NDQSFNIVDIKPTNMEE---LNE------VITAAEFHPIDCNLFVYSS-SKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 85 ~l~ss-~D~tI~lWd~~~~~~~~---~~~------~V~sv~f~p~~~~~las~s-~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
+.++. .++.|.+||.+++++.. ... ....+++ . ++.++++.. .+++|.++|+.+++..... ..
T Consensus 97 lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i----~~ 170 (328)
T 3dsm_A 97 AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDEL----TI 170 (328)
T ss_dssp EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEE----EC
T ss_pred EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEE----Ec
Confidence 55554 79999999998876321 112 3456677 3 456666665 4899999999988543211 00
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCC----------CCeEEEeecccccccCcccccccCCCCCCCccccccc
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRR----------KPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEI 223 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 223 (400)
......+ ...+++........ .+.|.++|..+++.. +.+..+ .
T Consensus 171 --g~~p~~i----------~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~----~~~~~~-----------~ 223 (328)
T 3dsm_A 171 --GIQPTSL----------VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE----KQFKFK-----------L 223 (328)
T ss_dssp --SSCBCCC----------EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE----EEEECC-----------T
T ss_pred --CCCccce----------EEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE----EEEecC-----------C
Confidence 0011111 22244433333222 278999998865432 111111 0
Q ss_pred ccCeEEEEECCCCcEEEEecCCeEEEEeCCCC
Q psy12356 224 ISSISDVKISNSGRYMISRDYLCVKVWDLHME 255 (400)
Q Consensus 224 ~~~V~~v~fSpdg~~las~~D~tIklWD~~~~ 255 (400)
......++|+||+++|..++. +|.+||..++
T Consensus 224 g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~ 254 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTLYWINN-DIWRMPVEAD 254 (328)
T ss_dssp TCCCEEEEECTTSCEEEEESS-SEEEEETTCS
T ss_pred CCCceeEEEecCCCEEEEEcc-EEEEEECCCC
Confidence 124688999999998875543 8889998865
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.01 E-value=8.8e-08 Score=94.09 Aligned_cols=213 Identities=10% Similarity=0.049 Sum_probs=122.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+..|+|+|+|+++++...++.|++||..++. +.++.... .... ++|+|+++ .
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~------------~~~~~~~~------------~~~~-ia~~~~g~--~ 184 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK------------VTTVHPGF------------KGGK-PAVTKDKQ--R 184 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTE------------EEEEEETC------------CBCB-CEECTTSS--E
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCE------------EEEeeccC------------CCCc-eeEecCCC--c
Confidence 57899999999998888888999999987531 12222111 1133 88988763 5
Q ss_pred EEEeeCCC--eEEEEEccCCCc-cc-------ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccC
Q psy12356 85 FLLSTNDQ--SFNIVDIKPTNM-EE-------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEG 154 (400)
Q Consensus 85 ~l~ss~D~--tI~lWd~~~~~~-~~-------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~ 154 (400)
++++..++ .|.++|..++.. .. ......+++++|+++.+++ +..++.|+.||..++.............
T Consensus 185 l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 185 VYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp EEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCC
Confidence 55555544 788888765542 11 2234678999996555555 6668899999988763210000000000
Q ss_pred ccccee-ceeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCC--CCCCc-ccccccccCeEE
Q psy12356 155 TNCNCQ-GLIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPE--DPTNK-SFFSEIISSISD 229 (400)
Q Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~h~~~V~~ 229 (400)
...... ++.+ .+ ++....+....+.|+.||..... ..+.+.. ..... ......-.....
T Consensus 264 ~~~~P~~~ia~----------~p~~g~lyv~d~~~~~I~~~~~~g~~------~~~~g~~~~~g~~dg~~~~~~~~~P~g 327 (409)
T 3hrp_A 264 LGTNPGPYLIY----------YFVDSNFYMSDQNLSSVYKITPDGEC------EWFCGSATQKTVQDGLREEALFAQPNG 327 (409)
T ss_dssp CCCSSCCEEEE----------ETTTTEEEEEETTTTEEEEECTTCCE------EEEEECTTCCSCBCEEGGGCBCSSEEE
T ss_pred CCCCccccEEE----------eCCCCEEEEEeCCCCEEEEEecCCCE------EEEEeCCCCCCcCCCcccccEeCCCeE
Confidence 000001 2222 24 35555566678899999875321 1111100 00000 000011135788
Q ss_pred EEECCCCcEEEE-e-cCCeEEEEeCCCCCCceeeec
Q psy12356 230 VKISNSGRYMIS-R-DYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 230 v~fSpdg~~las-~-~D~tIklWD~~~~~~~l~~~~ 263 (400)
++|+|+|+++++ . .++.|+.||+.++ .+.++-
T Consensus 328 ia~d~dG~lyvad~~~~~~I~~~~~~~G--~v~~~~ 361 (409)
T 3hrp_A 328 MTVDEDGNFYIVDGFKGYCLRKLDILDG--YVSTVA 361 (409)
T ss_dssp EEECTTCCEEEEETTTTCEEEEEETTTT--EEEEEE
T ss_pred EEEeCCCCEEEEeCCCCCEEEEEECCCC--EEEEEe
Confidence 999999997776 5 6789999997654 244443
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-08 Score=98.09 Aligned_cols=200 Identities=10% Similarity=0.040 Sum_probs=111.5
Q ss_pred EEEEEECCCCCeEEEecC--CCeEEEEEcCCCCccccCCCCcceeeee-eeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 6 REASQRFSDGELLATGDK--GGRVVIFQRDPLSKTSIPKRGEYNVYST-FQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~-~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+..++|||||++|.++.. +++|.+||+.+. +.+.+ +.... ...+.+.|++.
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~-----------~~~~~~i~~~~--------------~~~v~~~p~~~- 163 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSIGIVDVAKG-----------DYVEDVTAAAG--------------CWSVIPQPNRP- 163 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEEEEEETTTT-----------EEEEEEGGGTT--------------EEEEEECTTSS-
T ss_pred cceEEECCCCCEEEEECCCCCCeEEEEECCCC-----------cEEEEEecCCC--------------cceeEEcCCCC-
Confidence 346899999999998863 689999999853 23333 32111 11244566652
Q ss_pred ceEEEeeCCCeEEEEEccC-CCcccc----------cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccccee
Q psy12356 83 AHFLLSTNDQSFNIVDIKP-TNMEEL----------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCL 151 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~-~~~~~~----------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~ 151 (400)
..+++.+.|+.+.+|+++. ++.... ...+ .+.++|++ ..++..+.++.|.++|+............+
T Consensus 164 ~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~ 241 (361)
T 2oiz_A 164 RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDK-DKAHFVSYYGNVYSADFSGDEVKVDGPWSL 241 (361)
T ss_dssp SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECS-SEEEEEBTTSEEEEEECSSSSCEEEEEEES
T ss_pred eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccC-CEEEEEeCCCeEEEEEecCCCceecccccc
Confidence 3566678899999998864 432100 0111 23345664 456667788999999987552110000000
Q ss_pred ccCcc-cceeceeccCchhhhhhcccC-cceeecC---C-------CCCeEEEeecccccccCcccccccCCCCCCCccc
Q psy12356 152 IEGTN-CNCQGLIVPESKREERQSSQN-RREKEDN---R-------RKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSF 219 (400)
Q Consensus 152 ~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~-------~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
..... ...+. + .....+.+.++ ..+.+.. + ..++|.+||+.+.+.. +.+
T Consensus 242 ~~~~~~~~~~~---p-~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v----~~i----------- 302 (361)
T 2oiz_A 242 LNDEDKAKNWV---P-GGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV----ARI----------- 302 (361)
T ss_dssp CCHHHHHTTCE---E-CCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEE----EEE-----------
T ss_pred cCccccccccc---c-CCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEE----EEE-----------
Confidence 00000 00000 0 00000111233 2222211 1 2458999999876532 111
Q ss_pred ccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCC
Q psy12356 220 FSEIISSISDVKISNSGRYMISRDYLCVKVWDLHME 255 (400)
Q Consensus 220 ~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~ 255 (400)
..+. ..+|+|||||++|+++++++|.+||..++
T Consensus 303 -~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~ 335 (361)
T 2oiz_A 303 -PGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQP 335 (361)
T ss_dssp -ECTT--CCEEEEETTTTEEEEECSSCEEEEECSSS
T ss_pred -ecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCC
Confidence 1232 78999999999998765699999999985
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=4.4e-08 Score=102.88 Aligned_cols=129 Identities=10% Similarity=0.087 Sum_probs=76.4
Q ss_pred eeeEEEEEeccCCceEEEeeC-CC----eEEEEEccCCCcccc---cccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 70 KINKIRWLRRKNQAHFLLSTN-DQ----SFNIVDIKPTNMEEL---NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss~-D~----tI~lWd~~~~~~~~~---~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+..++||||++ .++.++. +| +|++||+++++.... ...+.+++|+||+ +.|++++.|+. .+
T Consensus 126 ~~~~~~~SPDg~--~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg-~~l~~~~~~~~-------~~ 195 (710)
T 2xdw_A 126 ALRGYAFSEDGE--YFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDG-KGMFYNAYPQQ-------DG 195 (710)
T ss_dssp EEEEEEECTTSS--EEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTS-SEEEEEECCCC-------SS
T ss_pred EEEEEEECCCCC--EEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCC-CEEEEEEECCc-------cc
Confidence 377899999985 5665432 22 899999999874321 1225679999986 67888877654 00
Q ss_pred cccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 142 ALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
.. . . . .. .......|++|++.++...+. ..+..+
T Consensus 196 ~~-~---~---~--------------------------~~-~~~~~~~v~~~~l~t~~~~~~--~v~~~~---------- 229 (710)
T 2xdw_A 196 KS-D---G---T--------------------------ET-STNLHQKLYYHVLGTDQSEDI--LCAEFP---------- 229 (710)
T ss_dssp CC-S---S---S--------------------------CC-CCCCCCEEEEEETTSCGGGCE--EEECCT----------
T ss_pred cc-c---c---c--------------------------cc-ccCCCCEEEEEECCCCcccce--EEeccC----------
Confidence 00 0 0 0 00 001234566666654432111 111111
Q ss_pred ccccCeEEEEECCCCcEEEE-ec-----CCeEEEEeCCC
Q psy12356 222 EIISSISDVKISNSGRYMIS-RD-----YLCVKVWDLHM 254 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~~las-~~-----D~tIklWD~~~ 254 (400)
.|...+.++.|||||++|+. +. +..|.+||+.+
T Consensus 230 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 230 DEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 23345778999999999873 32 56899999986
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.7e-08 Score=103.25 Aligned_cols=60 Identities=8% Similarity=0.164 Sum_probs=42.9
Q ss_pred eeeEEEEEeccCCceEEEe-----eCCCeEEEEEccCCCcc--cccccE--EEEEEecCCCCEEEEEeCCCe
Q psy12356 70 KINKIRWLRRKNQAHFLLS-----TNDQSFNIVDIKPTNME--ELNEVI--TAAEFHPIDCNLFVYSSSKGT 132 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~s-----s~D~tI~lWd~~~~~~~--~~~~~V--~sv~f~p~~~~~las~s~Dg~ 132 (400)
.+..++||||+. .++.+ +.+.+|++||+++++.. .+...+ .+++|+||+ +.|++++.|..
T Consensus 122 ~~~~~~~SPDG~--~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg-~~l~~~~~d~~ 190 (695)
T 2bkl_A 122 SLGTWAVSWDGK--KVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDS-KGFYYEWLPTD 190 (695)
T ss_dssp EEEEEEECTTSS--EEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTS-SEEEEEECCCC
T ss_pred EEEEEEECCCCC--EEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCC-CEEEEEEecCC
Confidence 478899999985 55532 23579999999998743 122222 688999986 68888888764
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.1e-08 Score=99.54 Aligned_cols=103 Identities=10% Similarity=0.161 Sum_probs=81.7
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
|+.|+| ||++|+++ .++.|++||+.... .......|+. .|.++.+.+. .+
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~-----------~~~~~~~~~~------------~v~~i~~~~p----~~ 139 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELS-----------EFRTVTSFEK------------PVFQLKNVNN----TL 139 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTT-----------CEEEEEECSS------------CEEEEEECSS----EE
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhh-----------ccCccceeec------------ceeeEEecCC----CE
Confidence 889999 99999999 88999999987532 1223445542 3677776642 37
Q ss_pred EEeeCCCeEEEEEccCCCcccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 86 LLSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+++..||++.+||++++....+...|++++|||+| ++.+..||++++|+...+
T Consensus 140 av~~~dG~L~v~dl~~~~~~~~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 140 VILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEESEEEEEECSSE---EEEEETTSCEEEEEEETT
T ss_pred EEEECCCCEEEEEccCCccccccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCc
Confidence 77889999999999988765667789999999985 578899999999988766
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.4e-08 Score=98.89 Aligned_cols=113 Identities=11% Similarity=0.126 Sum_probs=71.4
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
++.+++++...++|+|+.| .++||++.+.........+..... ....+.. |.+|+| ++. .+
T Consensus 40 ~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~-------------~~~~lp~-V~~l~f--d~~--~L 100 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFK-------------WEKEIPD-VIFVCF--HGD--QV 100 (388)
T ss_dssp CBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCS-------------EEEECTT-EEEEEE--ETT--EE
T ss_pred ccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccce-------------EEeeCCC-eeEEEE--CCC--EE
Confidence 6889999999999999988 466799764220000000001110 0111224 899999 552 44
Q ss_pred EEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 86 LLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+++ .++.|++||+.+.. ...+...+.++.+.+. + +|.+..||+|.+||+.++
T Consensus 101 ~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~ 156 (388)
T 1xip_A 101 LVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTK 156 (388)
T ss_dssp EEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTC
T ss_pred EEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCC
Confidence 455 88999999987543 1233445677666552 3 788888999999998766
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=9.9e-07 Score=90.27 Aligned_cols=205 Identities=13% Similarity=0.048 Sum_probs=117.7
Q ss_pred CCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCC
Q psy12356 12 FSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTND 91 (400)
Q Consensus 12 spdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D 91 (400)
+|.+.++++...+++|.++|..+. +++.++.... .+..+.|+||+. .+.+++.|
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~-----------~v~~~i~~g~-------------~p~~v~~SpDGr--~lyv~~~d 217 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTY-----------EIKTVLDTGY-------------AVHISRLSASGR--YLFVIGRD 217 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTC-----------CEEEEEECSS-------------CEEEEEECTTSC--EEEEEETT
T ss_pred CCCceEEEEeCCCCeEEEEECCCC-----------eEEEEEeCCC-------------CccceEECCCCC--EEEEEcCC
Confidence 345567778888999999999864 2344443221 256789999874 55567889
Q ss_pred CeEEEEEcc--CCCc-ccc--cccEEEEEEe----cCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceece
Q psy12356 92 QSFNIVDIK--PTNM-EEL--NEVITAAEFH----PIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGL 162 (400)
Q Consensus 92 ~tI~lWd~~--~~~~-~~~--~~~V~sv~f~----p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (400)
+.|.+||+. +++. ... ...-..++|+ |+|..++++...+++|.++|..+.+.+....-.-....... +
T Consensus 218 g~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~-~-- 294 (567)
T 1qks_A 218 GKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQE-Y-- 294 (567)
T ss_dssp SEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCC-E--
T ss_pred CeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccccc-c--
Confidence 999999995 5442 111 2235689999 68755555555689999999887744321100000000000 0
Q ss_pred eccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE
Q psy12356 163 IVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS 241 (400)
Q Consensus 163 ~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las 241 (400)
.++.....+..++++ ........+|.|.++|........ +... +.......+.|+|||++++.
T Consensus 295 -~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~--v~~i-------------~~~~~~~d~~~~pdgr~~~v 358 (567)
T 1qks_A 295 -HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK--TTEI-------------SAERFLHDGGLDGSHRYFIT 358 (567)
T ss_dssp -ESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE--EEEE-------------ECCSSEEEEEECTTSCEEEE
T ss_pred -cCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce--eeee-------------eccccccCceECCCCCEEEE
Confidence 000000001111221 223333467889998876532100 0000 11134567899999998764
Q ss_pred -e-cCCeEEEEeCCCCCCceeee
Q psy12356 242 -R-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 242 -~-~D~tIklWD~~~~~~~l~~~ 262 (400)
. .+++|.++|+.++. .+..+
T Consensus 359 a~~~sn~V~ViD~~t~k-l~~~i 380 (567)
T 1qks_A 359 AANARNKLVVIDTKEGK-LVAIE 380 (567)
T ss_dssp EEGGGTEEEEEETTTTE-EEEEE
T ss_pred EeCCCCeEEEEECCCCc-EEEEE
Confidence 3 46899999999863 44444
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=7.2e-08 Score=101.13 Aligned_cols=193 Identities=12% Similarity=0.123 Sum_probs=109.4
Q ss_pred eeEEEEEECCCCCeEE-----EecCCCeEEEEEcCCCCccccCCCCcceeee-eeeccCcchhhcccccccceeeEEEEE
Q psy12356 4 YMREASQRFSDGELLA-----TGDKGGRVVIFQRDPLSKTSIPKRGEYNVYS-TFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 4 ~~v~~v~fspdG~~La-----s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
+.|..++|||||++|| .|+.+.+|+|||+.+++ .+. .+.+. +...++|+
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~-----------~~~~~~~~~--------------k~~~~~Ws 183 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ-----------PLETPLKDV--------------KFSGISWL 183 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS-----------EEEEEEEEE--------------ESCCCEEE
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC-----------CCccccCCc--------------eeccEEEe
Confidence 3678899999999999 45555789999998753 111 11111 12467899
Q ss_pred eccCCceEEEeeCCC-------------eEEEEEccCCCc------c--c-ccccEEEEEEecCCCCEEEEEeC---CCe
Q psy12356 78 RRKNQAHFLLSTNDQ-------------SFNIVDIKPTNM------E--E-LNEVITAAEFHPIDCNLFVYSSS---KGT 132 (400)
Q Consensus 78 p~~~~~~~l~ss~D~-------------tI~lWd~~~~~~------~--~-~~~~V~sv~f~p~~~~~las~s~---Dg~ 132 (400)
|++ .++.++.|. .|++|++.++.. . . +...+.++.|+|++..++++.+. ++.
T Consensus 184 -Dg~--~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 260 (693)
T 3iuj_A 184 -GNE--GFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNR 260 (693)
T ss_dssp -TTT--EEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCE
T ss_pred -CCC--EEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcE
Confidence 874 677666653 499999976541 1 1 22346789999997555555543 258
Q ss_pred EEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCc-ceeec--CCCCCeEEEeecccccccCccccccc
Q psy12356 133 IRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNR-REKED--NRRKPAIRLCDMRAAALCDRHSKFFE 209 (400)
Q Consensus 133 i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~dg~i~lWD~~~~~~~~~~~~~~~ 209 (400)
|.+||+.++.... ..+...... .... + ..... +...+ +...+.|..+|+.++... ..+.
T Consensus 261 i~~~d~~~~~~~~---~~l~~~~~~-~~~~-~---------~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~--~~~~-- 322 (693)
T 3iuj_A 261 LYVKDLSQENAPL---LTVQGDLDA-DVSL-V---------DNKGSTLYLLTNRDAPNRRLVTVDAANPGPA--HWRD-- 322 (693)
T ss_dssp EEEEETTSTTCCC---EEEECSSSS-CEEE-E---------EEETTEEEEEECTTCTTCEEEEEETTSCCGG--GCEE--
T ss_pred EEEEECCCCCCce---EEEeCCCCc-eEEE-E---------eccCCEEEEEECCCCCCCEEEEEeCCCCCcc--ccEE--
Confidence 9999987762100 001000000 0000 0 01111 11111 123468888888764321 0111
Q ss_pred CCCCCCCcccccccccCeEEEEECCCCcEEEE-e-cCC--eEEEEeCCC
Q psy12356 210 EPEDPTNKSFFSEIISSISDVKISNSGRYMIS-R-DYL--CVKVWDLHM 254 (400)
Q Consensus 210 ~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~-~D~--tIklWD~~~ 254 (400)
+..|...+. .|+|+++.|+. . .++ .|++||+..
T Consensus 323 ----------l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 323 ----------LIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp ----------EECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred ----------EecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 123334444 89999998874 3 344 688998874
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.5e-07 Score=87.39 Aligned_cols=196 Identities=8% Similarity=-0.008 Sum_probs=107.9
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..+.+++|+|||+++++...++.|.+||..+++ ...+ ...+... ....++.+++.|++.
T Consensus 69 ~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~---------~~~~--~~~~~~~--------~~~~~~~i~~d~~G~-- 127 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIACSHGLRRLERQREPGGE---------WESI--ADSFEGK--------KLNSPNDVCLAPDGS-- 127 (296)
T ss_dssp SSEEEEEECTTCCEEEEETTTTEEEEECSTTCC---------EEEE--ECEETTE--------ECCCCCCEEECTTSC--
T ss_pred CCcceeeECCCCcEEEEecCCCeEEEEcCCCCc---------EEEE--eeccCCC--------CCCCCCCEEECCCCC--
Confidence 357899999999999988888999999986532 1111 1111100 012367789988763
Q ss_pred eEEEeeCC---------------CeEEEEEccC-CCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecc-cccc
Q psy12356 84 HFLLSTND---------------QSFNIVDIKP-TNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR-AAAL 143 (400)
Q Consensus 84 ~~l~ss~D---------------~tI~lWd~~~-~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~-~~~~ 143 (400)
.+++.+.. +.-+||.++. +.+. ......++++|+|++ +++++.+.++.|.+||+. .+.+
T Consensus 128 l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg-~~lv~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 128 LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSG-NLLVSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTS-CEEEEETTTTEEEEEEECSSSCE
T ss_pred EEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCC-CEEEEeCCCCeEEEEEECCCCcC
Confidence 44442110 1224555543 4432 223456899999986 556777788999999987 3322
Q ss_pred -cccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccc
Q psy12356 144 -CDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222 (400)
Q Consensus 144 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
... ..+ ....... +++...+++...++. ++.|.+||.. +... ..+ ..
T Consensus 207 ~~~~--~~~-~~~~~~p----------~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~----~~~------------~~ 254 (296)
T 3e5z_A 207 EYQG--VHF-TVEPGKT----------DGLRVDAGGLIWASA--GDGVHVLTPD-GDEL----GRV------------LT 254 (296)
T ss_dssp EEEE--EEE-CCSSSCC----------CSEEEBTTSCEEEEE--TTEEEEECTT-SCEE----EEE------------EC
T ss_pred cCCC--eEe-eCCCCCC----------CeEEECCCCCEEEEc--CCeEEEECCC-CCEE----EEE------------EC
Confidence 000 001 0000011 112222445444333 7889999976 3221 111 12
Q ss_pred cccCeEEEEE-CCCCcEEEEecCCeEEEEeCCC
Q psy12356 223 IISSISDVKI-SNSGRYMISRDYLCVKVWDLHM 254 (400)
Q Consensus 223 h~~~V~~v~f-Spdg~~las~~D~tIklWD~~~ 254 (400)
+.. +.+++| +|+++.|..++.+.+.-++..+
T Consensus 255 ~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~ 286 (296)
T 3e5z_A 255 PQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNV 286 (296)
T ss_dssp SSC-CCEEEEESTTSCEEEEEETTEEEEEECSC
T ss_pred CCC-ceeEEEECCCCCEEEEEcCCeEEEEEccc
Confidence 334 788999 6999877654333332334443
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.83 E-value=2.8e-07 Score=83.77 Aligned_cols=193 Identities=7% Similarity=-0.017 Sum_probs=120.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+.+++|+|+|+++++.. ++.|.+||..+.. ...+.... ...+..+++.|++. .
T Consensus 68 ~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~------------~~~~~~~~-----------~~~p~~i~~~~~g~--l 121 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN------------QTVLPFDG-----------LNYPEGLAVDTQGA--V 121 (270)
T ss_dssp SCCCEEECTTCCEEEEET-TTEEEEECTTCSC------------CEECCCCS-----------CSSEEEEEECTTCC--E
T ss_pred CcceeEECCCCCEEEEcC-CCEEEEEeCCCce------------EeeeecCC-----------cCCCcceEECCCCC--E
Confidence 467899999999777776 8899999986431 11111111 02367888988652 4
Q ss_pred EEEeeCCCeEEEEEccCCCcc--c--ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTNME--E--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~--~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++...++.|.+||..+.... . ......+++++|++ +++++...++.|.+||..+....... ...+ ....
T Consensus 122 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~---~~~~--~~p~ 195 (270)
T 1rwi_B 122 YVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQVVLP---FTDI--TAPW 195 (270)
T ss_dssp EEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTTTCCEEECC---CSSC--CSEE
T ss_pred EEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecCCCceEeec---ccCC--CCce
Confidence 444456789999976544321 1 11346789999975 68888777899999998776321100 0000 1122
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
++.+ .+++....+...++.|.+||....... .. + ..+...+.+++++|+|++++
T Consensus 196 ~i~~----------d~~g~l~v~~~~~~~v~~~~~~~~~~~-----~~--~---------~~~~~~p~~i~~~~~g~l~v 249 (270)
T 1rwi_B 196 GIAV----------DEAGTVYVTEHNTNQVVKLLAGSTTST-----VL--P---------FTGLNTPLAVAVDSDRTVYV 249 (270)
T ss_dssp EEEE----------CTTCCEEEEETTTSCEEEECTTCSCCE-----EC--C---------CCSCSCEEEEEECTTCCEEE
T ss_pred EEEE----------CCCCCEEEEECCCCcEEEEcCCCCcce-----ee--c---------cCCCCCceeEEECCCCCEEE
Confidence 2222 244445555556788999987643210 00 0 01224678999999999777
Q ss_pred E-ecCCeEEEEeCCCC
Q psy12356 241 S-RDYLCVKVWDLHME 255 (400)
Q Consensus 241 s-~~D~tIklWD~~~~ 255 (400)
+ ..+++|++++....
T Consensus 250 ~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 250 ADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EEGGGTEEEEECCCGG
T ss_pred EECCCCEEEEEcCCCc
Confidence 6 46899999998854
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=98.81 E-value=2e-05 Score=72.13 Aligned_cols=191 Identities=7% Similarity=-0.002 Sum_probs=115.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+.++.++++|++.++...++.|.+||.. +. .... .+..+. ..+..+++.+++. .
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~---------~~~~-~~~~~~------------~~~~~i~~~~~g~--l 75 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GR---------IKEF-EVPTPD------------AKVMCLIVSSLGD--I 75 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SC---------EEEE-ECSSTT------------CCEEEEEECTTSC--E
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCC-Cc---------eEEE-ECCCCC------------CcceeEEECCCCC--E
Confidence 57899999999988888788999999976 32 1111 111110 2367788877652 3
Q ss_pred EEEeeCCCeEEEEEccCCCccc-----ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEE-----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~-----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
+++...++.|..+|.+ ++... ....+.+++++|++ +++++...++.|..+|.. +..... .. .......
T Consensus 76 ~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~---~~-~~~~~~~ 148 (300)
T 2qc5_A 76 WFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEY---DL-PNKGSYP 148 (300)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEE---EC-SSTTCCE
T ss_pred EEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEc---cC-CCCCCCc
Confidence 4444457889999987 55321 12457899999975 777877778899999987 422100 00 0000111
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+.+ .+++....+...++.|..+|. .+... .+..+ .+...+..++++|+|++.
T Consensus 149 ~~i~~----------d~~g~l~v~~~~~~~i~~~~~-~g~~~-----~~~~~----------~~~~~~~~i~~d~~g~l~ 202 (300)
T 2qc5_A 149 AFITL----------GSDNALWFTENQNNSIGRITN-TGKLE-----EYPLP----------TNAAAPVGITSGNDGALW 202 (300)
T ss_dssp EEEEE----------CTTSSEEEEETTTTEEEEECT-TCCEE-----EEECS----------STTCCEEEEEECTTSSEE
T ss_pred eeEEE----------CCCCCEEEEecCCCeEEEECC-CCcEE-----EeeCC----------CCCCCcceEEECCCCCEE
Confidence 12222 133334333344677888887 33211 11111 122457899999999988
Q ss_pred EEe-cCCeEEEEeCC
Q psy12356 240 ISR-DYLCVKVWDLH 253 (400)
Q Consensus 240 as~-~D~tIklWD~~ 253 (400)
++. ..+.|.+||..
T Consensus 203 v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 203 FVEIMGNKIGRITTT 217 (300)
T ss_dssp EEETTTTEEEEECTT
T ss_pred EEccCCCEEEEEcCC
Confidence 775 46789999983
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=5.2e-06 Score=84.90 Aligned_cols=200 Identities=10% Similarity=-0.014 Sum_probs=119.1
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE----ecc
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL----RRK 80 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s----p~~ 80 (400)
.+..+.|||||++|.+++.|+.|.+||+... ..+.+.++... .....++|+ ||+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~---------t~~~v~~i~~G-------------~~P~~ia~s~~~~pDG 255 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMK---------EPTTVAEIKIG-------------SEARSIETSKMEGWED 255 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSS---------SCCEEEEEECC-------------SEEEEEEECCSTTCTT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCC---------CCcEeEEEecC-------------CCCceeEEccccCCCC
Confidence 5678999999999999999999999998511 11233334321 125678999 676
Q ss_pred CCceEEEee-CCCeEEEEEccCCCc-cc-------------c-cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc
Q psy12356 81 NQAHFLLST-NDQSFNIVDIKPTNM-EE-------------L-NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC 144 (400)
Q Consensus 81 ~~~~~l~ss-~D~tI~lWd~~~~~~-~~-------------~-~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~ 144 (400)
. .++++. .+++|.++|..+.+. +. + ...+.++.+++++...+++...+|.|.++|.......
T Consensus 256 k--~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~ 333 (567)
T 1qks_A 256 K--YAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL 333 (567)
T ss_dssp T--EEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE
T ss_pred C--EEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc
Confidence 3 455554 579999999877652 11 1 1147788888887666666667899999998764211
Q ss_pred ccccceeccCcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccC-CCCCCCcccccc
Q psy12356 145 DRHSKCLIEGTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEE-PEDPTNKSFFSE 222 (400)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 222 (400)
.. ..+.. .....+.. ..+++ +...+...+++|.++|+.+++... .... .. ..
T Consensus 334 ~v--~~i~~--~~~~~d~~----------~~pdgr~~~va~~~sn~V~ViD~~t~kl~~----~i~vgg~--------~P 387 (567)
T 1qks_A 334 KT--TEISA--ERFLHDGG----------LDGSHRYFITAANARNKLVVIDTKEGKLVA----IEDTGGQ--------TP 387 (567)
T ss_dssp EE--EEEEC--CSSEEEEE----------ECTTSCEEEEEEGGGTEEEEEETTTTEEEE----EEECSSS--------SB
T ss_pred ee--eeeec--cccccCce----------ECCCCCEEEEEeCCCCeEEEEECCCCcEEE----EEeccCc--------CC
Confidence 00 00000 00001111 12333 334444467899999998765421 1100 00 02
Q ss_pred cccCeEEEEECCCCc-EEEEe--cCCeEEEEeCCCC
Q psy12356 223 IISSISDVKISNSGR-YMISR--DYLCVKVWDLHME 255 (400)
Q Consensus 223 h~~~V~~v~fSpdg~-~las~--~D~tIklWD~~~~ 255 (400)
|.+....+ ++|++. ..+++ ++++|.++|..++
T Consensus 388 hpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 388 HPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred CCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 32222122 689855 44554 5789999999873
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.8e-07 Score=97.32 Aligned_cols=127 Identities=13% Similarity=0.136 Sum_probs=74.2
Q ss_pred eeeEEEEEeccCCceEEEeeCC-----CeEEEEEccCCCccc-cccc--EEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 70 KINKIRWLRRKNQAHFLLSTND-----QSFNIVDIKPTNMEE-LNEV--ITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss~D-----~tI~lWd~~~~~~~~-~~~~--V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+..++||||++ .++.++.+ .+|++||+++++... .... +.+++|+|| +.|++++.|+..+ .+
T Consensus 164 ~~~~~~~SPDG~--~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD--~~l~~~~~~~~~~-----~~ 234 (741)
T 1yr2_A 164 ALDAWAASDDGR--LLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN--DALLYSRFAEPKE-----GQ 234 (741)
T ss_dssp EEEEEEECTTSS--EEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT--SEEEEEECCCC---------
T ss_pred EEEeEEECCCCC--EEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC--CEEEEEEecCccc-----cc
Confidence 477899999985 56654322 479999999988422 1112 257899997 5677777765411 01
Q ss_pred cccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 142 ALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
... .......|++|++.++...+. ..+..+
T Consensus 235 ~~~--------------------------------------~~~~~~~v~~~~lgt~~~~~~--lv~~~~---------- 264 (741)
T 1yr2_A 235 AFQ--------------------------------------ALNYNQTVWLHRLGTPQSADQ--PVFATP---------- 264 (741)
T ss_dssp ------------------------------------------CCCCCEEEEEETTSCGGGCE--EEECCT----------
T ss_pred ccc--------------------------------------cCCCCCEEEEEECCCCchhCE--EEeccC----------
Confidence 000 001233566666654332111 112111
Q ss_pred ccccCeEEEEECCCCcEEEE-ecC-----CeEEEEeCCCC
Q psy12356 222 EIISSISDVKISNSGRYMIS-RDY-----LCVKVWDLHME 255 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~~las-~~D-----~tIklWD~~~~ 255 (400)
.+...+.++.|||||++|+. +.+ ..|++||+.++
T Consensus 265 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 265 ELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred CCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 22235789999999998873 433 48999999875
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.79 E-value=3.6e-06 Score=81.49 Aligned_cols=115 Identities=11% Similarity=0.090 Sum_probs=73.0
Q ss_pred EEEECCCCCeEEEec----------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 8 ASQRFSDGELLATGD----------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 8 ~v~fspdG~~Las~s----------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
.++|||||++|..+. .+++|.+||..+.+ ...++.--... ... .......++|+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~-----------~~~~i~~~~~~-~~~----~g~~p~~~~~s 133 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL-----------PIADIELPDAP-RFD----VGPYSWMNANT 133 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc-----------EEEEEECCCcc-ccc----cCCCccceEEC
Confidence 789999999999885 36789999987532 22222110000 000 00113468899
Q ss_pred eccCCceEEEee-C-CCeEEEEEccCCCcccc-cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 78 RRKNQAHFLLST-N-DQSFNIVDIKPTNMEEL-NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 78 p~~~~~~~l~ss-~-D~tI~lWd~~~~~~~~~-~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
||+. .++++. . +++|.++| ++++.... -..-.++.+.|++...+++.+.||.+..+|. +++
T Consensus 134 pDG~--~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 134 PNNA--DLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred CCCC--EEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 9974 555554 3 58899999 88874221 1111235667777778888889999999999 764
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.67 E-value=2e-06 Score=79.84 Aligned_cols=201 Identities=9% Similarity=0.073 Sum_probs=112.6
Q ss_pred eeEEEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeee-eccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTF-QSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
..+.+++++|+ |+++++.. ++.|.+||.. ++ . ..+ ...... .....+.++++.|++.
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~---------~---~~~~~~~~~~-------~~~~~~~~i~~d~~g~ 129 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GT---------F---EEIAKKDSEG-------RRMQGCNDCAFDYEGN 129 (314)
T ss_dssp CCEEEEEECSSSSEEEEEET-TTEEEEEETT-SC---------E---EECCSBCTTS-------CBCBCCCEEEECTTSC
T ss_pred CCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CC---------E---EEEEeccCCC-------ccccCCcCEEECCCCC
Confidence 45789999999 87666554 4478899986 32 1 111 110000 0012377899988763
Q ss_pred CceEEEeeCC---------------CeEEEEEccCCCccc---ccccEEEEEEe----cCCCCEEEEEeCCCeEEEEecc
Q psy12356 82 QAHFLLSTND---------------QSFNIVDIKPTNMEE---LNEVITAAEFH----PIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 82 ~~~~l~ss~D---------------~tI~lWd~~~~~~~~---~~~~V~sv~f~----p~~~~~las~s~Dg~i~lWD~~ 139 (400)
.+++...+ +.|..+|.+ +++.. .......++|+ |++..++++...++.|.+||+.
T Consensus 130 --l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 130 --LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp --EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred --EEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 44444444 456666654 44321 12345789999 9864455666678999999987
Q ss_pred -cccccccccceeccCcc---cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCC
Q psy12356 140 -AAALCDRHSKCLIEGTN---CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT 215 (400)
Q Consensus 140 -~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 215 (400)
.+.+... ........ ....++ ...+++...++...++.|..||..++... ..+
T Consensus 207 ~~g~~~~~--~~~~~~~~~~~~~p~~i----------~~d~~G~l~v~~~~~~~i~~~d~~~g~~~----~~~------- 263 (314)
T 1pjx_A 207 GPAKIENK--KVWGHIPGTHEGGADGM----------DFDEDNNLLVANWGSSHIEVFGPDGGQPK----MRI------- 263 (314)
T ss_dssp ETTEEEEE--EEEEECCCCSSCEEEEE----------EEBTTCCEEEEEETTTEEEEECTTCBSCS----EEE-------
T ss_pred CCCccccc--eEEEECCCCCCCCCCce----------EECCCCCEEEEEcCCCEEEEEcCCCCcEe----EEE-------
Confidence 3321100 00111100 011111 12244444444335788999998754321 111
Q ss_pred CcccccccccCeEEEEECCCCcEE-EEe-cCCeEEEEeCCCCC
Q psy12356 216 NKSFFSEIISSISDVKISNSGRYM-ISR-DYLCVKVWDLHMES 256 (400)
Q Consensus 216 ~~~~~~~h~~~V~~v~fSpdg~~l-as~-~D~tIklWD~~~~~ 256 (400)
..+...+.+++|+|+|++| +++ .++.|..||+...+
T Consensus 264 -----~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 264 -----RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp -----ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred -----eCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 1223568899999999955 454 46799999988654
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.67 E-value=6.4e-07 Score=85.43 Aligned_cols=118 Identities=8% Similarity=0.065 Sum_probs=74.5
Q ss_pred eEEEEEECCCCCeEEEec--CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 5 MREASQRFSDGELLATGD--KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s--~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.+..|+++|||+++++.. .++.++||.++++ . +..|...... ...+-..+..|++.|++
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g---------~---~~~~p~~~~~-----~~~~~~~p~gv~~d~~g-- 78 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQD---------G---LIPFPPQSGN-----AIITFDTVLGIKSDGNG-- 78 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETT---------E---EEESCCCCSS-----CCCCCSCEEEEEECSSS--
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCC---------C---eecCCCcccC-----cccceeEeeEEEEcCCC--
Confidence 578999999999999864 2343666766422 1 1122111000 00011347889998875
Q ss_pred ceEEEe-eC-----CCeEEEEEccCCCc-ccc---------cccEEEEEEecCCCCEEEEEe---CCCeEEEEeccccc
Q psy12356 83 AHFLLS-TN-----DQSFNIVDIKPTNM-EEL---------NEVITAAEFHPIDCNLFVYSS---SKGTIRLCDMRAAA 142 (400)
Q Consensus 83 ~~~l~s-s~-----D~tI~lWd~~~~~~-~~~---------~~~V~sv~f~p~~~~~las~s---~Dg~i~lWD~~~~~ 142 (400)
++.++ .. +..|.+||++++++ +.. ...++.++++|+++..+++.+ .++.|.+||+.+++
T Consensus 79 -~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 79 -IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp -EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred -cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 44443 22 57899999988762 111 124688999987666667766 68899999998774
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.63 E-value=4.9e-06 Score=77.66 Aligned_cols=91 Identities=10% Similarity=0.046 Sum_probs=57.9
Q ss_pred EEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.....|+|+|+ ++++...++.|..|+... . ...+..+. ..++.+++.|++ +
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----------~---~~~~~~~~------------~~~~gl~~d~dG---~ 98 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWREDG----------T---VDVLLDAT------------AFTNGNAVDAQQ---R 98 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTS----------C---EEEEEESC------------SCEEEEEECTTS---C
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeCCC----------C---EEEEeCCC------------CccceeeECCCC---C
Confidence 45788999998 677777889999998742 1 12333332 237788998876 4
Q ss_pred EEEe-eCCCeEEEEEccCCCccccc--------ccEEEEEEecCCCCEEEE
Q psy12356 85 FLLS-TNDQSFNIVDIKPTNMEELN--------EVITAAEFHPIDCNLFVY 126 (400)
Q Consensus 85 ~l~s-s~D~tI~lWd~~~~~~~~~~--------~~V~sv~f~p~~~~~las 126 (400)
++++ ..++.|.+||.+ +++..+. ..+++++++|+| +++++
T Consensus 99 l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~t 147 (305)
T 3dr2_A 99 LVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDG-AIWFT 147 (305)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTS-CEEEE
T ss_pred EEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCC-CEEEe
Confidence 5555 456789999976 5532111 124567777764 45554
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.8e-06 Score=80.47 Aligned_cols=202 Identities=8% Similarity=0.036 Sum_probs=117.6
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+..++|+|||++.++...++.|.+||..+. ++...+...... +.......+++ .. ++
T Consensus 85 ~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~-----------~~~~~i~~g~~~-------~~~~~p~~i~~-~~---~~ 142 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIWDYRIFIINPKTY-----------EITGYIECPDMD-------MESGSTEQMVQ-YG---KY 142 (328)
T ss_dssp SEEEEEEEETTEEEEEEBSCSEEEEEETTTT-----------EEEEEEECTTCC-------TTTCBCCCEEE-ET---TE
T ss_pred CCcEEEEeCCCeEEEEECCCCeEEEEECCCC-----------eEEEEEEcCCcc-------ccCCCcceEEE-EC---CE
Confidence 4678999999976666658999999998753 223333321100 00012445666 32 25
Q ss_pred EEEee--CCCeEEEEEccCCCcc-c--ccccEEEEEEecCCCCEEEEEeCC----------CeEEEEecccccccccccc
Q psy12356 85 FLLST--NDQSFNIVDIKPTNME-E--LNEVITAAEFHPIDCNLFVYSSSK----------GTIRLCDMRAAALCDRHSK 149 (400)
Q Consensus 85 ~l~ss--~D~tI~lWd~~~~~~~-~--~~~~V~sv~f~p~~~~~las~s~D----------g~i~lWD~~~~~~~~~~~~ 149 (400)
+.++. .+++|.++|+++++.. . .......++++|++ ++++++..+ +.|.++|..++++...
T Consensus 143 lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG-~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~--- 218 (328)
T 3dsm_A 143 VYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYN-KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQ--- 218 (328)
T ss_dssp EEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTS-EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEE---
T ss_pred EEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCC-CEEEEECCCccCCccccCCceEEEEECCCCeEEEE---
Confidence 55554 4899999999887632 1 12234578899975 666666554 7899999988754321
Q ss_pred eeccCcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeE
Q psy12356 150 CLIEGTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
+....+....++.+ .+++ ....+. +.|.+||+.+++.... . + +........
T Consensus 219 -~~~~~g~~p~~la~----------~~d~~~lyv~~---~~v~~~d~~t~~~~~~--~-~-----------~~~~~~~p~ 270 (328)
T 3dsm_A 219 -FKFKLGDWPSEVQL----------NGTRDTLYWIN---NDIWRMPVEADRVPVR--P-F-----------LEFRDTKYY 270 (328)
T ss_dssp -EECCTTCCCEEEEE----------CTTSCEEEEES---SSEEEEETTCSSCCSS--C-S-----------BCCCSSCEE
T ss_pred -EecCCCCCceeEEE----------ecCCCEEEEEc---cEEEEEECCCCceeee--e-e-----------ecCCCCceE
Confidence 10000111222333 2333 333332 2888999876543210 0 0 111124578
Q ss_pred EEEECC-CCcEEEEe-----cCCeEEEEeCCCCCCceeee
Q psy12356 229 DVKISN-SGRYMISR-----DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 229 ~v~fSp-dg~~las~-----~D~tIklWD~~~~~~~l~~~ 262 (400)
.++++| ++++.++. .+++|.+||.. + +.++++
T Consensus 271 gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g-~~~~~i 308 (328)
T 3dsm_A 271 GLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G-KLIDEF 308 (328)
T ss_dssp EEEECTTTCCEEEEECTTSSSEEEEEEECTT-C-CEEEEE
T ss_pred EEEEcCCCCeEEEEcccccccCCEEEEECCC-C-CEEEEE
Confidence 899999 56666654 36899999998 4 456665
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.61 E-value=2.6e-06 Score=78.89 Aligned_cols=54 Identities=4% Similarity=-0.014 Sum_probs=40.0
Q ss_pred eEEEeeCCCeEEEEEccCCCcc----ccc-ccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME----ELN-EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~----~~~-~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+++++.|+.|++||.++|+.. ... ..+.++.+.|+| ++++ +.++.|..||. ++
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G 65 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DG 65 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TS
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CC
Confidence 5666788999999999888731 112 257888999985 6777 45778999997 55
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.61 E-value=1.1e-05 Score=74.93 Aligned_cols=199 Identities=10% Similarity=0.068 Sum_probs=114.0
Q ss_pred EEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 7 EASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 7 ~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
-+..|+|+ +.++++...+++|+.||..++. ...+. +. ..+.++++.|++ .+
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~------------~~~~~-~~------------~~~~~i~~~~dG---~l 67 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ------------VQRVT-MD------------APVSSVALRQSG---GY 67 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCC------------EEEEE-CS------------SCEEEEEEBTTS---SE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCc------------EEEEe-CC------------CceEEEEECCCC---CE
Confidence 46789995 5567777778999999987532 11221 11 247889998876 45
Q ss_pred EEeeCCCeEEEEEccCCCcccc--------cccEEEEEEecCCCCEEEEEeCC---------CeEEEEeccccccccccc
Q psy12356 86 LLSTNDQSFNIVDIKPTNMEEL--------NEVITAAEFHPIDCNLFVYSSSK---------GTIRLCDMRAAALCDRHS 148 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~~~~--------~~~V~sv~f~p~~~~~las~s~D---------g~i~lWD~~~~~~~~~~~ 148 (400)
+++. +..|.+||.+++++..+ ...++.++++|+| +++++...+ ..-+||.+........
T Consensus 68 ~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-- 143 (297)
T 3g4e_A 68 VATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-- 143 (297)
T ss_dssp EEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE--
T ss_pred EEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCCEEE--
Confidence 5554 56899999987764221 1347899999986 566655322 3345665543211100
Q ss_pred ceeccCcccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecc--cccccCcccccccCCCCCCCccccccccc
Q psy12356 149 KCLIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMR--AAALCDRHSKFFEEPEDPTNKSFFSEIIS 225 (400)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 225 (400)
+... .....++ ...+++. ...+.+.++.|..||+. ++.... .+.+.. +..+..
T Consensus 144 --~~~~-~~~pngi----------~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~--~~~~~~---------~~~~~~ 199 (297)
T 3g4e_A 144 --YFDQ-VDISNGL----------DWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISN--RRSVYK---------LEKEEQ 199 (297)
T ss_dssp --EEEE-ESBEEEE----------EECTTSCEEEEEEGGGTEEEEEEECTTTCCEEE--EEEEEE---------CCGGGC
T ss_pred --Eeec-cccccce----------EEcCCCCEEEEecCCCCcEEEEeccCCCCcccC--cEEEEE---------CCCCCC
Confidence 0000 0011122 2234442 33444567889999874 332110 011110 112224
Q ss_pred CeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 226 SISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 226 ~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
....++++++|++.++. ..+.|..||..++. .+..+
T Consensus 200 ~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~-~~~~i 236 (297)
T 3g4e_A 200 IPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK-RLQTV 236 (297)
T ss_dssp EEEEEEEBTTSCEEEEEETTTEEEEECTTTCC-EEEEE
T ss_pred CCCeeEECCCCCEEEEEcCCCEEEEEcCCCce-EEEEE
Confidence 57789999999987765 56789999988653 34433
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.54 E-value=4.3e-06 Score=77.81 Aligned_cols=185 Identities=7% Similarity=0.017 Sum_probs=103.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..+.+++|+|||+++++. ++.|.+||..+++ .+ .+...... .....++.+++.|++
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~---------~~---~~~~~~~~-------~~~~~~~di~~d~dG--- 109 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKEQS---------AV---VLATVDND-------KKNNRFNDGKVDPAG--- 109 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE---------EE---EEEECCTT-------CSSEEEEEEEECTTS---
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCCCc---------EE---EEEecCCC-------CCCCCCCCEEECCCC---
Confidence 357899999999977654 5689999987532 11 22211100 001347889998876
Q ss_pred eEEEee-C---------CCeEEEEEccC-CCcccc---cccEEEEEEecCCCCEEEEEeCCCeEEEEecc--cccccccc
Q psy12356 84 HFLLST-N---------DQSFNIVDIKP-TNMEEL---NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR--AAALCDRH 147 (400)
Q Consensus 84 ~~l~ss-~---------D~tI~lWd~~~-~~~~~~---~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~--~~~~~~~~ 147 (400)
++.++. . ....+||.++. +..... ....+.++|+|++..++++.+.++.|..||+. ++.+...
T Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~- 188 (297)
T 3g4e_A 110 RYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNR- 188 (297)
T ss_dssp CEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEE-
T ss_pred CEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCc-
Confidence 344432 2 23457777754 332211 23457899999875566777778999999973 4422110
Q ss_pred cceeccCcc--cceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccccc
Q psy12356 148 SKCLIEGTN--CNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIIS 225 (400)
Q Consensus 148 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 225 (400)
..+..... ... +++...+++...++...++.|..||..+++.. ..+. .+..
T Consensus 189 -~~~~~~~~~~~~p----------~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~----~~i~------------~p~~ 241 (297)
T 3g4e_A 189 -RSVYKLEKEEQIP----------DGMCIDAEGKLWVACYNGGRVIRLDPVTGKRL----QTVK------------LPVD 241 (297)
T ss_dssp -EEEEECCGGGCEE----------EEEEEBTTSCEEEEEETTTEEEEECTTTCCEE----EEEE------------CSSS
T ss_pred -EEEEECCCCCCCC----------CeeEECCCCCEEEEEcCCCEEEEEcCCCceEE----EEEE------------CCCC
Confidence 01111100 011 11111234444444345678999998765432 1111 1224
Q ss_pred CeEEEEEC-CCCcEEE
Q psy12356 226 SISDVKIS-NSGRYMI 240 (400)
Q Consensus 226 ~V~~v~fS-pdg~~la 240 (400)
.+.+++|+ ||++.|.
T Consensus 242 ~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMY 257 (297)
T ss_dssp BEEEEEEESGGGCEEE
T ss_pred CceEEEEeCCCCCEEE
Confidence 68999998 8988664
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=98.54 E-value=1e-05 Score=78.36 Aligned_cols=114 Identities=11% Similarity=0.161 Sum_probs=70.4
Q ss_pred EEEECCCCCeEEEec----------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 8 ASQRFSDGELLATGD----------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 8 ~v~fspdG~~Las~s----------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
.+++||||++|..++ .++.|.+||..+.+ +.+++.--... . .........++|+
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~-----------v~~~I~v~~g~-r----~~~g~~P~~~a~s 145 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL-----------PTADIELPDAP-R----FLVGTYPWMTSLT 145 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-----------EEEEEEETTCC-C----CCBSCCGGGEEEC
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe-----------EEEEEECCCcc-c----cccCCCCceEEEc
Confidence 489999999887765 36789999998643 33333210000 0 0000013458899
Q ss_pred eccCCceEEEee--CCCeEEEEEccCCCcc-cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 78 RRKNQAHFLLST--NDQSFNIVDIKPTNME-ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 78 p~~~~~~~l~ss--~D~tI~lWd~~~~~~~-~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
||+. .+.++. .+++|.++|+++++.. .+.-. .+....|.+...|++.+.||.+-+.++.+
T Consensus 146 pDGk--~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g~~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 146 PDGK--TLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-DCYHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp TTSS--EEEEEECSSSCEEEEEETTTTEEEEEEECC-SEEEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred CCCC--EEEEEEcCCCCeEEEEECCCCcEEEEEECC-CcceeecCCCceeEEECCCCCEEEEECCC
Confidence 9874 455554 3789999999988732 11100 01123355566788888999999999876
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=3.6e-05 Score=70.37 Aligned_cols=191 Identities=8% Similarity=0.007 Sum_probs=117.8
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+.+++++|+|++.++...++.|..||... .. ..+..... ...+..+++.|++. .
T Consensus 58 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g----------~~---~~~~~~~~----------~~~~~~i~~~~~g~--l 112 (299)
T 2z2n_A 58 KVMCLTISSDGEVWFTENAANKIGRITKKG----------II---KEYTLPNP----------DSAPYGITEGPNGD--I 112 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTS----------CE---EEEECSST----------TCCEEEEEECTTSC--E
T ss_pred ceeeEEECCCCCEEEeCCCCCeEEEECCCC----------cE---EEEeCCCc----------CCCceeeEECCCCC--E
Confidence 478999999999998887789999999752 11 11211100 12377888887652 3
Q ss_pred EEEeeCCCeEEEEEccCCCccc-----ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEE-----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~-----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
+++...++.|..||. ++.... ....+.+++++|++ +++++...++.|..||. ++..... .. .......
T Consensus 113 ~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~~~---~~-~~~~~~~ 185 (299)
T 2z2n_A 113 WFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN-ALWFTENQNNAIGRITE-SGDITEF---KI-PTPASGP 185 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEE---EC-SSTTCCE
T ss_pred EEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC-CCcEEEe---eC-CCCCCcc
Confidence 444456789999998 554321 22457899999975 77777777889999998 5532110 00 0000111
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+.+ .+++....+...++.|..||. ++.. ..+..+ .+...+.+++++|+|++.
T Consensus 186 ~~i~~----------~~~g~l~v~~~~~~~i~~~~~-~g~~-----~~~~~~----------~~~~~~~~i~~~~~g~l~ 239 (299)
T 2z2n_A 186 VGITK----------GNDDALWFVEIIGNKIGRITT-SGEI-----TEFKIP----------TPNARPHAITAGAGIDLW 239 (299)
T ss_dssp EEEEE----------CTTSSEEEEETTTTEEEEECT-TCCE-----EEEECS----------STTCCEEEEEECSTTCEE
T ss_pred eeEEE----------CCCCCEEEEccCCceEEEECC-CCcE-----EEEECC----------CCCCCceeEEECCCCCEE
Confidence 12222 233444444445778999987 4332 111111 123568899999999987
Q ss_pred EEe-cCCeEEEEeCC
Q psy12356 240 ISR-DYLCVKVWDLH 253 (400)
Q Consensus 240 as~-~D~tIklWD~~ 253 (400)
++. .++.|..||..
T Consensus 240 v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 240 FTEWGANKIGRLTSN 254 (299)
T ss_dssp EEETTTTEEEEEETT
T ss_pred EeccCCceEEEECCC
Confidence 775 57899999983
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.50 E-value=5e-06 Score=81.50 Aligned_cols=215 Identities=7% Similarity=0.037 Sum_probs=116.8
Q ss_pred EEECCCCCeEEEecCCC--eEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE
Q psy12356 9 SQRFSDGELLATGDKGG--RVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL 86 (400)
Q Consensus 9 v~fspdG~~Las~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l 86 (400)
++|+|+|++|..++.++ .|.+|+..+.. . .+.+....+. ....+..++++|+. +.+.
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~----------~-~~~~g~~~~~--------~~~~p~~iav~p~~--g~ly 234 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGW----------A-PTRIGQLGST--------FSGKIGAVALDETE--EWLY 234 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTT----------C-EEEEEECCTT--------SCSCCCBCEECTTS--SEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCc----------e-eEEeeeccch--------hcCCcEEEEEeCCC--CeEE
Confidence 88999999998888766 78888876431 1 1112000000 01236678898843 2566
Q ss_pred EeeCCCeEEEEEccCCCcccc--------ccc--EEEEEEecCCCCEEEEEeCCCeEEEEeccccccc-ccccceeccCc
Q psy12356 87 LSTNDQSFNIVDIKPTNMEEL--------NEV--ITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC-DRHSKCLIEGT 155 (400)
Q Consensus 87 ~ss~D~tI~lWd~~~~~~~~~--------~~~--V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~-~~~~~~~~~~~ 155 (400)
++..++.|+.||.+++..... ... .+.++|+|+++.++++-..++.|+.||....... ..... .....
T Consensus 235 v~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~-~~g~~ 313 (409)
T 3hrp_A 235 FVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSAT-QKTVQ 313 (409)
T ss_dssp EECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTT-CCSCB
T ss_pred EEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCC-CCCcC
Confidence 665688999999987653211 111 1389999976678888888999999997654110 00000 00000
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCC-CCCeEEEeecccccccCcccccccCC-CC-CCC-cccccccccCeEEEE
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNR-RKPAIRLCDMRAAALCDRHSKFFEEP-ED-PTN-KSFFSEIISSISDVK 231 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dg~i~lWD~~~~~~~~~~~~~~~~~-~~-~~~-~~~~~~h~~~V~~v~ 231 (400)
........+. ...++...+++....+.+ .++.|+.||+..+.. ..+.+. .. ... .......-.....|+
T Consensus 314 dg~~~~~~~~--~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-----~~~~g~~~~~g~~~g~~~~~~~~~P~gia 386 (409)
T 3hrp_A 314 DGLREEALFA--QPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-----STVAGQVDVASQIDGTPLEATFNYPYDIC 386 (409)
T ss_dssp CEEGGGCBCS--SEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-----EEEEECTTCBSCCCBSTTTCCBSSEEEEE
T ss_pred CCcccccEeC--CCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-----EEEeCCCCCCCcCCCChhceEeCCceEEE
Confidence 0000000000 001122234555555566 788999999755432 111110 00 000 000001124578999
Q ss_pred ECCCCcEEEE-ecCCeEEEEeC
Q psy12356 232 ISNSGRYMIS-RDYLCVKVWDL 252 (400)
Q Consensus 232 fSpdg~~las-~~D~tIklWD~ 252 (400)
++|+|+++++ ...+.||.+++
T Consensus 387 vd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 387 YDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ECSSSEEEEEESTTCEEEEEEE
T ss_pred EcCCCCEEEEECCCCeEEEEEe
Confidence 9999988887 45688887765
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.48 E-value=4.8e-05 Score=71.79 Aligned_cols=191 Identities=8% Similarity=0.032 Sum_probs=109.3
Q ss_pred EEEEEECCCC-CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDG-ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG-~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.....|+|++ .++++...++.|.+||..++. ...+. +. ..+.++.|.|++ .
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~------------~~~~~-~~------------~~v~~i~~~~dg---~ 102 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGR------------KTVHA-LP------------FMGSALAKISDS---K 102 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTE------------EEEEE-CS------------SCEEEEEEEETT---E
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCc------------EEEEE-CC------------CcceEEEEeCCC---e
Confidence 3578899975 566677678999999987531 11221 11 247889999986 5
Q ss_pred EEEeeCCCeEEEEEccCCCcccc--------cccEEEEEEecCCCCEEEEEeCC----CeEEEEecccccccccccceec
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEEL--------NEVITAAEFHPIDCNLFVYSSSK----GTIRLCDMRAAALCDRHSKCLI 152 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~~--------~~~V~sv~f~p~~~~~las~s~D----g~i~lWD~~~~~~~~~~~~~~~ 152 (400)
+++++.+ .|.+||.+++++..+ ...+++++++|++ +++++...+ +...||.+.++.... +.
T Consensus 103 l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~~g~~~~-----~~ 175 (326)
T 2ghs_A 103 QLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVAKGKVTK-----LF 175 (326)
T ss_dssp EEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEETTEEEE-----EE
T ss_pred EEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEeCCcEEE-----ee
Confidence 6665544 499999988774211 1358899999986 566655422 234555544332110 00
Q ss_pred cCcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecc--cc-cccCcccccccCCCCCCCcccccccccCeE
Q psy12356 153 EGTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMR--AA-ALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
.. .....++ ...+++ ......+.++.|.+||+. ++ .... .+.+.. +........
T Consensus 176 ~~-~~~~~~i----------~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~--~~~~~~---------~~~~~~~p~ 233 (326)
T 2ghs_A 176 AD-ISIPNSI----------CFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK--AEVFID---------STGIKGGMD 233 (326)
T ss_dssp EE-ESSEEEE----------EECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC--CEEEEE---------CTTSSSEEE
T ss_pred CC-CcccCCe----------EEcCCCCEEEEEECCCCEEEEEEcccccCCcccC--ceEEEE---------CCCCCCCCC
Confidence 00 0001112 223444 233444557899999986 33 2111 011110 011123467
Q ss_pred EEEECCCCcEEEEe-cCCeEEEEeCC
Q psy12356 229 DVKISNSGRYMISR-DYLCVKVWDLH 253 (400)
Q Consensus 229 ~v~fSpdg~~las~-~D~tIklWD~~ 253 (400)
.++++++|++.++. .++.|.+||..
T Consensus 234 gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 234 GSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEECTTSCEEEEEETTTEEEEECTT
T ss_pred eeEECCCCCEEEEEeCCCEEEEECCC
Confidence 89999999987765 56789999874
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.46 E-value=1.3e-05 Score=76.18 Aligned_cols=201 Identities=11% Similarity=0.097 Sum_probs=113.0
Q ss_pred eeEEEEEeccCCceEEEee--CCCeEEEEEccCCCcc----------cccccEEEEEEecCCCCEEEEEeC-----CCeE
Q psy12356 71 INKIRWLRRKNQAHFLLST--NDQSFNIVDIKPTNME----------ELNEVITAAEFHPIDCNLFVYSSS-----KGTI 133 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss--~D~tI~lWd~~~~~~~----------~~~~~V~sv~f~p~~~~~las~s~-----Dg~i 133 (400)
+..|+++|++. .+++.. .++.++||.++++.+. .+...+.+++|+|++ ++++.-.. ++.|
T Consensus 19 p~~va~~~~g~--~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 19 PGNITLTPDGR--LFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp EEEEEECTTSC--EEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCCEE
T ss_pred cceEEECCCCC--EEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeE
Confidence 67899998763 444432 2343777877654432 112457899999974 56665433 5678
Q ss_pred EEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCC
Q psy12356 134 RLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPED 213 (400)
Q Consensus 134 ~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~ 213 (400)
.+||+.++++. +.+++....
T Consensus 96 ~~~d~~tg~~~----------------------------------------------~~~~~~~~~-------------- 115 (343)
T 2qe8_A 96 VAWDTLNNQLS----------------------------------------------RVIYLPPPI-------------- 115 (343)
T ss_dssp EEEETTTTEEE----------------------------------------------EEEECCTTT--------------
T ss_pred EEEECCCCeEE----------------------------------------------EEEECChhh--------------
Confidence 88888766321 111110000
Q ss_pred CCCcccccccccCeEEEEECCC-CcEEEE-e---cCCeEEEEeCCCCCCceeeecCCCc-CCC-------Cccc-CCCCC
Q psy12356 214 PTNKSFFSEIISSISDVKISNS-GRYMIS-R---DYLCVKVWDLHMESRPVETYPTHTK-EEN-------GQLR-DPSNI 279 (400)
Q Consensus 214 ~~~~~~~~~h~~~V~~v~fSpd-g~~las-~---~D~tIklWD~~~~~~~l~~~~~h~~-~~~-------g~~~-~~~~~ 279 (400)
..+......++++|+ |...++ . .++.|.+||..++. ..+.+.+|.. .++ |+.+ ..+.+
T Consensus 116 -------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 187 (343)
T 2qe8_A 116 -------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-AARVLQGYPGIAPEDIDLVIDGVPVQIGQPD 187 (343)
T ss_dssp -------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-EEEECTTCTTTSCCSCCCEETTEECBEECTT
T ss_pred -------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-EEEEecCCCcccccccceeECCEEEEeccCC
Confidence 011234578999986 444455 3 56899999998753 3444545421 111 1100 00011
Q ss_pred ceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecc---cchh---------------------h-ccc
Q psy12356 280 TALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASP---RGIF---------------------A-DAH 334 (400)
Q Consensus 280 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~---~~~~---------------------~-~gh 334 (400)
+.++.| ....+.++++|||+.|.... .+++ . .|+
T Consensus 188 g~~~~~---------------------~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (343)
T 2qe8_A 188 GTVIRP---------------------HLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE 246 (343)
T ss_dssp SCEECC---------------------CCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE
T ss_pred Cceece---------------------ecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc
Confidence 111111 12357899999997553211 0110 0 134
Q ss_pred ccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 335 TYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 335 ~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
......+++++||.++++. .++.|.+|+.
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred CCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 4466789999999988886 6889999998
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=4.2e-05 Score=80.03 Aligned_cols=58 Identities=12% Similarity=0.185 Sum_probs=39.2
Q ss_pred eeeEEEEEeccCCceEEEe----e-CCCeEEEEEccCCCcc-ccccc--EEEEEEecCCCCEEEEEeCCC
Q psy12356 70 KINKIRWLRRKNQAHFLLS----T-NDQSFNIVDIKPTNME-ELNEV--ITAAEFHPIDCNLFVYSSSKG 131 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~s----s-~D~tI~lWd~~~~~~~-~~~~~--V~sv~f~p~~~~~las~s~Dg 131 (400)
.+..++||||++ .++.+ + .+.+|++||+++|+.. ..... ..+++|+ |+ +.|++++.|.
T Consensus 130 ~l~~~~~SpDg~--~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg-~~l~y~~~~~ 195 (693)
T 3iuj_A 130 ALDQLSFSRDGR--ILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GN-EGFFYSSYDK 195 (693)
T ss_dssp EEEEEEECTTSS--EEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TT-TEEEEEESSC
T ss_pred EEEEEEECCCCC--EEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CC-CEEEEEEecC
Confidence 377889999984 55533 1 2368999999999842 22222 3578899 75 6778887764
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.28 E-value=5e-05 Score=71.66 Aligned_cols=112 Identities=11% Similarity=0.089 Sum_probs=68.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.+++|+|||+++++. .+ .|.+||..+++ .+ .+...... .....++.+++.|++. .
T Consensus 91 ~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~---------~~---~~~~~~~~-------~~~~~~~~i~~d~~G~--l 147 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS-DD-GLFLRDTATGV---------LT---LHAELESD-------LPGNRSNDGRMHPSGA--L 147 (326)
T ss_dssp CEEEEEEEETTEEEEEE-TT-EEEEEETTTCC---------EE---EEECSSTT-------CTTEEEEEEEECTTSC--E
T ss_pred cceEEEEeCCCeEEEEE-CC-CEEEEECCCCc---------EE---EEeeCCCC-------CCCCCCCCEEECCCCC--E
Confidence 57889999999988865 33 49999986532 11 12111100 0013478899998763 3
Q ss_pred EEEeeCC----CeEEEEEccCCCcccc---cccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 85 FLLSTND----QSFNIVDIKPTNMEEL---NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 85 ~l~ss~D----~tI~lWd~~~~~~~~~---~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
+++...+ ....||.+++++.... ....++++|+|++..++++.+.++.|.+||+.
T Consensus 148 ~v~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 148 WIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred EEEeCCCcCCCCceEEEEEeCCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 3333221 3455665554443221 13467899999864455665668899999986
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.24 E-value=6.9e-05 Score=73.65 Aligned_cols=114 Identities=12% Similarity=0.225 Sum_probs=68.9
Q ss_pred EEEECCCCCeEEEec----------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 8 ASQRFSDGELLATGD----------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 8 ~v~fspdG~~Las~s----------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
.++|||||++|..+. .++.|.++|..+.+ ..+++.--... ... .......++++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~-----------vv~~I~v~g~~-r~~----~g~~P~~~~~s 185 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL-----------PIADIELPDAP-RFL----VGTYQWMNALT 185 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-----------EEEEEEETTCC-CCC----BSCCGGGSEEC
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc-----------EEEEEECCCcc-ccc----cCCCcceEEEc
Confidence 789999999888876 46789999987643 23333210000 000 00012347899
Q ss_pred eccCCceEEEee-C-CCeEEEEEccCCCcc-ccc-ccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 78 RRKNQAHFLLST-N-DQSFNIVDIKPTNME-ELN-EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 78 p~~~~~~~l~ss-~-D~tI~lWd~~~~~~~-~~~-~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
||+. ++.++. . +++|.+.|+++++.. ... .. +....|++...+++.+.||.+-+.|..++
T Consensus 186 pDGk--~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~~~~~p~g~~~~v~~~~dG~~~~V~~~~~ 249 (426)
T 3c75_H 186 PDNK--NLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--CYHIFPASPTVFYMNCRDGSLARVDFADG 249 (426)
T ss_dssp TTSS--EEEEEECSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSSEEEEECCTT
T ss_pred CCCC--EEEEEecCCCCeEEEEECCCCeEEEEEEcCC--ceeeccCCCcEEEEEcCCCCEEEEECCCC
Confidence 9874 555554 2 689999999887632 111 11 12345555567777788888888887554
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=98.20 E-value=0.00042 Score=63.11 Aligned_cols=192 Identities=7% Similarity=0.002 Sum_probs=115.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..+.+++++++|++.++...++.|..||.. +. . ..+..... ...+..+++.+++.
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~---------~---~~~~~~~~----------~~~~~~i~~~~~g~-- 116 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG---------F---TEYPLPQP----------DSGPYGITEGLNGD-- 116 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SC---------E---EEEECSST----------TCCEEEEEECSTTC--
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CC---------e---EEecCCCC----------CCCCccceECCCCC--
Confidence 357889999999988887778999999976 21 1 11211100 02367888877652
Q ss_pred eEEEeeCCCeEEEEEccCCCccc-----ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEE-----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~-----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++...++.|..+|.+ ++... ....+.+++++|++ +++++...++.|..+|. ++.... . ........
T Consensus 117 l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~-~---~~~~~~~~ 189 (300)
T 2qc5_A 117 IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDN-ALWFTENQNNSIGRITN-TGKLEE-Y---PLPTNAAA 189 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEE-E---ECSSTTCC
T ss_pred EEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCC-CEEEEecCCCeEEEECC-CCcEEE-e---eCCCCCCC
Confidence 34444457889999987 55321 12457899999975 67777777889999998 442211 0 00000011
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
...+.+ .+++....+....+.|..||. .+.. ..+..+ .+...+.+++++|+|++
T Consensus 190 ~~~i~~----------d~~g~l~v~~~~~~~i~~~~~-~g~~-----~~~~~~----------~~~~~~~~i~~d~~g~l 243 (300)
T 2qc5_A 190 PVGITS----------GNDGALWFVEIMGNKIGRITT-TGEI-----SEYDIP----------TPNARPHAITAGKNSEI 243 (300)
T ss_dssp EEEEEE----------CTTSSEEEEETTTTEEEEECT-TCCE-----EEEECS----------STTCCEEEEEECSTTCE
T ss_pred cceEEE----------CCCCCEEEEccCCCEEEEEcC-CCcE-----EEEECC----------CCCCCceEEEECCCCCE
Confidence 112222 133434444344667888887 2221 111111 12245789999999998
Q ss_pred EEEe-cCCeEEEEeCC
Q psy12356 239 MISR-DYLCVKVWDLH 253 (400)
Q Consensus 239 las~-~D~tIklWD~~ 253 (400)
.++. .++.|..+|..
T Consensus 244 ~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 244 WFTEWGANQIGRITND 259 (300)
T ss_dssp EEEETTTTEEEEECTT
T ss_pred EEeccCCCeEEEECCC
Confidence 7765 46889999873
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.11 E-value=0.00037 Score=64.71 Aligned_cols=115 Identities=10% Similarity=0.061 Sum_probs=69.6
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.++.++|+|||+++++...++.|.+|+.+ +. .. .+..+... .....++.+++.|++. .
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~---------~~---~~~~~~~~-------~~~~~~~~i~~d~dG~--l 144 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ---------AH---LLVGRYAG-------KRLNSPNDLIVARDGA--I 144 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SC---------EE---EEECEETT-------EECSCCCCEEECTTSC--E
T ss_pred ccceeeECCCCCEEEEECCCCEEEEECCC-CC---------EE---EEEeccCC-------CccCCCCCEEECCCCC--E
Confidence 47889999999988877777899999975 21 11 12111100 0012367789988763 4
Q ss_pred EEE----eeC-------------CCeEEEEEccCCCcccc--cccEEEEEEecCCCCEEEEEeC-----CCeEEEEeccc
Q psy12356 85 FLL----STN-------------DQSFNIVDIKPTNMEEL--NEVITAAEFHPIDCNLFVYSSS-----KGTIRLCDMRA 140 (400)
Q Consensus 85 ~l~----ss~-------------D~tI~lWd~~~~~~~~~--~~~V~sv~f~p~~~~~las~s~-----Dg~i~lWD~~~ 140 (400)
+++ +.. .+.|..+|.+++++... ....+.++|+|++..++++.+. ++.|..||+..
T Consensus 145 ~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 145 WFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp EEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred EEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 443 221 24566667666664322 2345789999986434444333 27899999876
Q ss_pred c
Q psy12356 141 A 141 (400)
Q Consensus 141 ~ 141 (400)
+
T Consensus 225 ~ 225 (305)
T 3dr2_A 225 G 225 (305)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00016 Score=69.72 Aligned_cols=112 Identities=10% Similarity=0.093 Sum_probs=68.2
Q ss_pred EEEECCCCCeEEEec----------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 8 ASQRFSDGELLATGD----------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 8 ~v~fspdG~~Las~s----------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
.+.|||||++|..+. .+++|.+||..+.+ +.+++...... ..+. ......++++
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~-----------vv~~I~v~~~~-~~~~----g~~P~~ia~S 132 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL-----------PIADIELPDAP-RFSV----GPRVHIIGNC 132 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC-----------EEEEEEETTSC-SCCB----SCCTTSEEEC
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC-----------EEEEEECCCcc-cccc----CCCcceEEEc
Confidence 689999999999886 47899999998643 34444322000 0000 0013358899
Q ss_pred eccCCceEEEee-C-CCeEEE--EEccCCCcccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 78 RRKNQAHFLLST-N-DQSFNI--VDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 78 p~~~~~~~l~ss-~-D~tI~l--Wd~~~~~~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
||+. .++++. . +..+.+ +|+.+ .....-. .++.+.|++...+++.+.|+.+-+-|+.+
T Consensus 133 pDGk--~lyVan~~~~~~v~V~~iD~~t--v~~i~v~-~~~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 133 ASSA--CLLFFLFGSSAAAGLSVPGASD--DQLTKSA-SCFHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp TTSS--CEEEEECSSSCEEEEEETTTEE--EEEEECS-SCCCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred CCCC--EEEEEccCCCCeEEEEEEchhh--ceEEECC-CceEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 9874 455554 2 467888 99865 2111000 01123566666777778899888888876
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.02 E-value=0.00039 Score=67.06 Aligned_cols=201 Identities=9% Similarity=0.001 Sum_probs=108.4
Q ss_pred EEEEECCCCCeEEEecC--CCeEEEEEcCCCCccccCCCCcceeeee-eeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 7 EASQRFSDGELLATGDK--GGRVVIFQRDPLSKTSIPKRGEYNVYST-FQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~-~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..++|||||++|..+.. +++|.++| .+++ +.++ +..- .++.+.|+++ .
T Consensus 128 ~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~-----------~~~~~i~~~----------------~~~~~~~~~~-~ 178 (373)
T 2mad_H 128 WMNANTPNNADLLFFQFAAGPAVGLVV-QGGS-----------SDDQLLSSP----------------TCYHIHPGAP-S 178 (373)
T ss_pred cceEECCCCCEEEEEecCCCCeEEEEE-CCCC-----------EEeEEcCCC----------------ceEEEEeCCC-c
Confidence 46899999999998874 57899999 7542 2333 2110 1244556653 2
Q ss_pred eEEEeeCCCeEEEEEccCCCcccc---------cc-cEEEEEEecCCCCEEEEEeCCCeEEEEecccccc--ccccccee
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEEL---------NE-VITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL--CDRHSKCL 151 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~~---------~~-~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~--~~~~~~~~ 151 (400)
.+++.+.|+.+.++|. +++.... .. ......|.++++.+ +..+..+.+.+.|+.++.. .... .+
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~v~vid~~~~~~~v~~~~--~~ 254 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRI-VWPVYSGKILQADISAAGATNKAPI--DA 254 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEE-EEEcCCceEEEEeccCCcceEeeee--ee
Confidence 4556678999999999 6653210 01 12334667765443 4444678899999875521 1100 00
Q ss_pred ccCcccceeceeccCchhhhhhcccCc-ceeecCC---------CCCeEEEeecccccccCcccccccCCCCCCCccccc
Q psy12356 152 IEGTNCNCQGLIVPESKREERQSSQNR-REKEDNR---------RKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFS 221 (400)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
.+.... ...+.+.....+...+++ .+..... .++.|.+.|+.+.+.. +.+.
T Consensus 255 ~~~~~~---~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv----~~i~------------ 315 (373)
T 2mad_H 255 LSGGRK---ADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTS----SQIS------------ 315 (373)
T ss_pred cCCccc---ccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEE----EEEE------------
Confidence 000000 000000000001112222 1111110 2467888998876532 1111
Q ss_pred ccccCeEEEEECCCCc-EEEEe--cCCeEEEEeCCCCCCceee
Q psy12356 222 EIISSISDVKISNSGR-YMISR--DYLCVKVWDLHMESRPVET 261 (400)
Q Consensus 222 ~h~~~V~~v~fSpdg~-~las~--~D~tIklWD~~~~~~~l~~ 261 (400)
.......++|+|||+ +++++ .+++|.++|+.++. .+++
T Consensus 316 -~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~-vv~~ 356 (373)
T 2mad_H 316 -LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD-QDQS 356 (373)
T ss_pred -CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC-EEee
Confidence 112467899999999 66654 47999999999864 4554
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.6e-06 Score=83.78 Aligned_cols=182 Identities=14% Similarity=0.089 Sum_probs=89.0
Q ss_pred CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCe
Q psy12356 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQS 93 (400)
Q Consensus 14 dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~t 93 (400)
++.+|++++.||.|+.||..+++ .+-.+.. .. +.+..+.+++ ..+++++.|+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~-----------~~W~~~~-~~-------------~~s~p~~~~g--~~~v~~s~dg~ 60 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS-----------IKWTLKE-DP-------------VLQVPTHVEE--PAFLPDPNDGS 60 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC-----------EEEEEEC-CC-------------SCCCC-------CCEEECTTTCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCC-----------EEEEecC-CC-------------ceecceEcCC--CEEEEeCCCCE
Confidence 68899999999999999988653 1222222 11 2222233333 24556678999
Q ss_pred EEEEEccCCCcc-cc----cccEE-EEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCc
Q psy12356 94 FNIVDIKPTNME-EL----NEVIT-AAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPES 167 (400)
Q Consensus 94 I~lWd~~~~~~~-~~----~~~V~-sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (400)
|+.||.++|+.. .+ ...+. +..+. .+ .++++++.|+.|..||.++|+..-.+....
T Consensus 61 l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~-~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---------------- 122 (369)
T 2hz6_A 61 LYTLGSKNNEGLTKLPFTIPELVQASPCRS-SD-GILYMGKKQDIWYVIDLLTGEKQQTLSSAF---------------- 122 (369)
T ss_dssp EEEC-----CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC----------------------------
T ss_pred EEEEECCCCceeeeeeccCccccccCceEe-cC-CEEEEEeCCCEEEEEECCCCcEEEEecCCC----------------
Confidence 999999887631 11 11111 11111 22 456778889999999999985432111000
Q ss_pred hhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC----CcEEEEec
Q psy12356 168 KREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS----GRYMISRD 243 (400)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd----g~~las~~ 243 (400)
.....+.+..+..++.|+.++.||.++++.. +.. .. ......+++++ +.+++++.
T Consensus 123 ---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~------W~~----------~~--~~~~~~~~~~~~~~~~~v~~~~~ 181 (369)
T 2hz6_A 123 ---ADSLSPSTSLLYLGRTEYTITMYDTKTRELR------WNA----------TY--FDYAASLPEDDVDYKMSHFVSNG 181 (369)
T ss_dssp -------------EEEEEEEEEEECCCSSSSSCC------CEE----------EE--EEECCBCCCCCTTCCCCEEEEET
T ss_pred ---cccccccCCEEEEEecCCEEEEEECCCCCEE------EeE----------ec--ccccCccccCCccccceEEEECC
Confidence 0011122222233346889999999887532 110 00 01122333343 56666778
Q ss_pred CCeEEEEeCCCCCCceeee
Q psy12356 244 YLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 244 D~tIklWD~~~~~~~l~~~ 262 (400)
|+.|+.||.+++. .+-++
T Consensus 182 dg~v~a~d~~tG~-~~W~~ 199 (369)
T 2hz6_A 182 DGLVVTVDSESGD-VLWIQ 199 (369)
T ss_dssp SCEEEEECTTTCC-EEEEE
T ss_pred CCEEEEEECCCCc-EEEEe
Confidence 8999999999874 34443
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.83 E-value=3.4e-05 Score=74.33 Aligned_cols=134 Identities=13% Similarity=0.092 Sum_probs=63.6
Q ss_pred ceEEEeeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
+.+++++.|+.|+.||.++|+.. .. ..+.+..+.++ +.++++++.|+.|+.||..+++.........
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~-------- 79 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI-------- 79 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCH--------
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeeeeeccC--------
Confidence 47788889999999999998731 11 33333344454 3567777899999999998884321110000
Q ss_pred eceeccCchhhhhhcc----cCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 160 QGLIVPESKREERQSS----QNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
...+... .++. +..++.|+.+..||.++++.. +.. ..+ . .+.++|+
T Consensus 80 ---------~~~~~~sp~~~~~~~-v~~g~~dg~v~a~D~~tG~~~------w~~----------~~~-~---~~~~~p~ 129 (369)
T 2hz6_A 80 ---------PELVQASPCRSSDGI-LYMGKKQDIWYVIDLLTGEKQ------QTL----------SSA-F---ADSLSPS 129 (369)
T ss_dssp ---------HHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------------------
T ss_pred ---------ccccccCceEecCCE-EEEEeCCCEEEEEECCCCcEE------EEe----------cCC-C---ccccccc
Confidence 0000001 1121 223446889999999987642 110 011 1 2456777
Q ss_pred CcEEEE-ecCCeEEEEeCCCCC
Q psy12356 236 GRYMIS-RDYLCVKVWDLHMES 256 (400)
Q Consensus 236 g~~las-~~D~tIklWD~~~~~ 256 (400)
+..++. +.|+.|+.||.+++.
T Consensus 130 ~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 130 TSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp ---EEEEEEEEEEECCCSSSSS
T ss_pred CCEEEEEecCCEEEEEECCCCC
Confidence 777664 568999999999864
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.79 E-value=0.0002 Score=72.61 Aligned_cols=29 Identities=10% Similarity=0.045 Sum_probs=23.9
Q ss_pred CeEEEEECCCCcEEEEe--cCCeEEEEeCCC
Q psy12356 226 SISDVKISNSGRYMISR--DYLCVKVWDLHM 254 (400)
Q Consensus 226 ~V~~v~fSpdg~~las~--~D~tIklWD~~~ 254 (400)
...++.|||||+++..+ .+.+|.++|+.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~ 308 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR 308 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcc
Confidence 34579999999988754 478999999995
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.74 E-value=0.001 Score=64.26 Aligned_cols=190 Identities=12% Similarity=0.083 Sum_probs=108.4
Q ss_pred EEECCCCCeEEEecC-----CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 9 SQRFSDGELLATGDK-----GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 9 v~fspdG~~Las~s~-----Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+...|||+++-.... +++|.+.|..+. +++.++..-. .. .++++||+.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~-----------~v~~~I~vG~-------------~P-~va~spDG~-- 90 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG-----------RVIGMIDGGF-------------LP-NPVVADDGS-- 90 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT-----------EEEEEEEECS-------------SC-EEEECTTSS--
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC-----------eEEEEEECCC-------------CC-cEEECCCCC--
Confidence 346799998887765 689999998753 3444443211 12 389999874
Q ss_pred eEEEee----------CCCeEEEEEccCCCcc-cc--c--------ccEEEEEEecCCCCEEEEEeC-CCeEEEEecccc
Q psy12356 84 HFLLST----------NDQSFNIVDIKPTNME-EL--N--------EVITAAEFHPIDCNLFVYSSS-KGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss----------~D~tI~lWd~~~~~~~-~~--~--------~~V~sv~f~p~~~~~las~s~-Dg~i~lWD~~~~ 141 (400)
.+.++. .+++|.+||..+++.. .. . ..-..++|+|||..++++... +++|.++|+.++
T Consensus 91 ~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 91 FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred EEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 444443 3678999999887731 11 0 112358999997555555443 789999999998
Q ss_pred cccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccc-ccccCcccccccCCCCCCCcccc
Q psy12356 142 ALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRA-AALCDRHSKFFEEPEDPTNKSFF 220 (400)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~-~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
+...+.. ..+| .. ..+ ...+ .....+.||++-..++.. +...+.....+. +.
T Consensus 171 ~vv~tI~-----v~g~--~~-~~P---------~g~~-~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~-~~-------- 223 (386)
T 3sjl_D 171 AFKRMLD-----VPDC--YH-IFP---------TAPD-TFFMHCRDGSLAKVAFGTEGTPEITHTEVFH-PE-------- 223 (386)
T ss_dssp EEEEEEE-----CCSE--EE-EEE---------EETT-EEEEEETTSCEEEEECCSSSCCEEEECCCCS-CT--------
T ss_pred cEEEEEE-----CCCc--ce-eec---------CCCc-eeEEECCCCCEEEEECCCCCeEEEeecceec-cc--------
Confidence 6533210 0011 00 011 1111 112334577777777764 332110001110 10
Q ss_pred cccccCe-EEEEE-CCCCcEEEEecCCeEEEEeCCCC
Q psy12356 221 SEIISSI-SDVKI-SNSGRYMISRDYLCVKVWDLHME 255 (400)
Q Consensus 221 ~~h~~~V-~~v~f-Spdg~~las~~D~tIklWD~~~~ 255 (400)
..++ ...+| .++|+++..+.+++|.+.|+.++
T Consensus 224 ---~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 224 ---DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG 257 (386)
T ss_dssp ---TSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTS
T ss_pred ---cccccccceeEcCCCcEEEEeCCCEEEEEECCCC
Confidence 0111 12366 47998777666799999999865
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0021 Score=63.05 Aligned_cols=114 Identities=9% Similarity=0.113 Sum_probs=71.9
Q ss_pred eEEEEEECCCCCeEEEecCC------CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 5 MREASQRFSDGELLATGDKG------GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D------g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
....+..+||| +.+++..+ |.|.+.|..+. +++.++..-... ...-..+.|+|
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~-----------~v~~~~~~~~~~---------~~~~Yd~~~~p 197 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF-----------EPLGKWEIDRGD---------QYLAYDFWWNL 197 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC-----------CEEEECCSBCTT---------CCCCCCEEEET
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC-----------eEEEEEccCCCC---------ccccceEEECC
Confidence 45667889999 77777666 78999998754 234444311000 01123477899
Q ss_pred ccCCceEEEee-------------------CCCeEEEEEccCCCc-ccc--c---ccEEEEEE--ecCCCCEEEEEe---
Q psy12356 79 RKNQAHFLLST-------------------NDQSFNIVDIKPTNM-EEL--N---EVITAAEF--HPIDCNLFVYSS--- 128 (400)
Q Consensus 79 ~~~~~~~l~ss-------------------~D~tI~lWd~~~~~~-~~~--~---~~V~sv~f--~p~~~~~las~s--- 128 (400)
+++ .++++. .+.+|.+||+.+++. +.+ . ..-..+.| +|++...++.+-
T Consensus 198 ~~~--~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~ 275 (462)
T 2ece_A 198 PNE--VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSL 275 (462)
T ss_dssp TTT--EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEET
T ss_pred CCC--EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeec
Confidence 874 555553 378999999987652 111 1 12344555 998766667776
Q ss_pred --CCCeEEEEecccc
Q psy12356 129 --SKGTIRLCDMRAA 141 (400)
Q Consensus 129 --~Dg~i~lWD~~~~ 141 (400)
.+++|-+|....+
T Consensus 276 ~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 276 KDLSSSIWLWFYEDG 290 (462)
T ss_dssp TTCCEEEEEEEEETT
T ss_pred cCCCceEEEEEecCC
Confidence 7789988887654
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0026 Score=62.37 Aligned_cols=195 Identities=11% Similarity=0.063 Sum_probs=106.3
Q ss_pred EEEEECCCCCeEEEecC--CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 7 EASQRFSDGELLATGDK--GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
..++|||||++|..+.. +++|.+.|+.+. +.++++.--. +....|++. ..
T Consensus 180 ~~~~~spDGk~lyV~n~~~~~~VsVID~~t~-----------kvv~~I~v~g----------------~~~~~p~g~-~~ 231 (426)
T 3c75_H 180 WMNALTPDNKNLLFYQFSPAPAVGVVDLEGK-----------TFDRMLDVPD----------------CYHIFPASP-TV 231 (426)
T ss_dssp GGSEECTTSSEEEEEECSSSCEEEEEETTTT-----------EEEEEEECCS----------------EEEEEEEET-TE
T ss_pred ceEEEcCCCCEEEEEecCCCCeEEEEECCCC-----------eEEEEEEcCC----------------ceeeccCCC-cE
Confidence 45789999999998864 589999999853 3334433110 122334442 24
Q ss_pred EEEeeCCCeEEEEEccCCCcc-----cc----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc--ccccc-----
Q psy12356 85 FLLSTNDQSFNIVDIKPTNME-----EL----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL--CDRHS----- 148 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~-----~~----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~--~~~~~----- 148 (400)
+++.+.|+.+.+.+..+++.. .. ......+.|.|++..++++ +..+.+.+.|+..+.. .....
T Consensus 232 ~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~-s~~g~V~ViD~~~~~~~v~~~~~~~~~~ 310 (426)
T 3c75_H 232 FYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP-TYTGKIFQADLTAEGATFRAPIEALTEA 310 (426)
T ss_dssp EEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE-BTTSEEEEEEECSSCEEECCCEESSCTT
T ss_pred EEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE-eCCCcEEEEeccCCceEEeeeeeecccc
Confidence 444556666666666443321 00 0112346788888866554 4678899999864421 11000
Q ss_pred ----ceeccCcccceeceeccCchhhhhhcccCc-ceeec--C----C---CCCeEEEeecccccccCcccccccCCCCC
Q psy12356 149 ----KCLIEGTNCNCQGLIVPESKREERQSSQNR-REKED--N----R---RKPAIRLCDMRAAALCDRHSKFFEEPEDP 214 (400)
Q Consensus 149 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~----~---~dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 214 (400)
........ .+.++ +++ ++... . + .++.|.+.|+.+.+... .+.
T Consensus 311 ~i~~g~~p~g~~----~va~s----------~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~----~I~----- 367 (426)
T 3c75_H 311 ERADDWRPGGWQ----QTAYH----------RQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERIN----KIE----- 367 (426)
T ss_dssp TGGGTEEECSSS----CEEEE----------GGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE----EEE-----
T ss_pred ccccccccCCce----eeEEc----------CCCCEEEEEecccccccccCCCCEEEEEECCCCeEEE----EEE-----
Confidence 00001100 00011 111 11111 0 0 23578899988754321 110
Q ss_pred CCcccccccccCeEEEEECCCCc-EEEEe--cCCeEEEEeCCCCCCceeee
Q psy12356 215 TNKSFFSEIISSISDVKISNSGR-YMISR--DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 215 ~~~~~~~~h~~~V~~v~fSpdg~-~las~--~D~tIklWD~~~~~~~l~~~ 262 (400)
.+ .....++|+|||+ +|+++ .+++|.++|+.+.. .++++
T Consensus 368 ------vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k-vv~tI 409 (426)
T 3c75_H 368 ------LG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE-ELRSV 409 (426)
T ss_dssp ------EE--EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC-EEEEE
T ss_pred ------CC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC-EEEEe
Confidence 01 2467899999999 77765 37999999999864 56665
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.041 Score=51.05 Aligned_cols=120 Identities=12% Similarity=0.127 Sum_probs=70.6
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcc-----hhh---cccccccceeeEEEEE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPE-----FDY---LKSLEIEEKINKIRWL 77 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-----~~~---~~~~~~~~~V~~v~~s 77 (400)
..+++++|+|+++.++..++.|..|+..+.. +..+...... ++. .........+..+++.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~ 88 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSG------------FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYN 88 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTC------------EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCc------------eEEEecccccccccccccccchhccccCCCCceEEEc
Confidence 5678999999978888889999999876431 1122210000 000 0000011236778888
Q ss_pred e-ccCCceEEEeeCCCeEEEEEccCCCcccc--------cccEEEEEEec-CCCCEEEEEeC-----------------C
Q psy12356 78 R-RKNQAHFLLSTNDQSFNIVDIKPTNMEEL--------NEVITAAEFHP-IDCNLFVYSSS-----------------K 130 (400)
Q Consensus 78 p-~~~~~~~l~ss~D~tI~lWd~~~~~~~~~--------~~~V~sv~f~p-~~~~~las~s~-----------------D 130 (400)
+ ++ .+.++.....|..+|.+++..+.+ ....+.+++.| ++ +++++... +
T Consensus 89 ~~~g---~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~ 164 (322)
T 2fp8_A 89 LQNN---QLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKT 164 (322)
T ss_dssp TTTT---EEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCC
T ss_pred CCCC---cEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCC
Confidence 6 43 566664445578888776543211 12367899999 75 67676533 3
Q ss_pred CeEEEEecccc
Q psy12356 131 GTIRLCDMRAA 141 (400)
Q Consensus 131 g~i~lWD~~~~ 141 (400)
+.|..+|..++
T Consensus 165 g~v~~~d~~~~ 175 (322)
T 2fp8_A 165 GRLIKYDPSTK 175 (322)
T ss_dssp EEEEEEETTTT
T ss_pred ceEEEEeCCCC
Confidence 67778887655
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0033 Score=63.75 Aligned_cols=147 Identities=9% Similarity=0.078 Sum_probs=77.8
Q ss_pred eEEEEEccC--CCc--ccc--cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc-----ccccceeccC-ccccee
Q psy12356 93 SFNIVDIKP--TNM--EEL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC-----DRHSKCLIEG-TNCNCQ 160 (400)
Q Consensus 93 tI~lWd~~~--~~~--~~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~-----~~~~~~~~~~-~~~~~~ 160 (400)
.|.+.|.++ +.. ... .....++.|+|||...++++..+.+|.++|+.+.... .......... .+....
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred cEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 477777766 321 111 1223578999998666666667999999999865210 0000001111 012222
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccc-----cccccCeEEEEECCC
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFF-----SEIISSISDVKISNS 235 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~V~~v~fSpd 235 (400)
++.| .+++.+..+.-.|+.|-.||+.... +.|.+.........+ .+|...-..+.++||
T Consensus 335 h~aF----------~~dG~aY~t~~ldsqV~kwdi~~a~------~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~D 398 (595)
T 1fwx_A 335 HTAF----------DGRGNAYTSLFLDSQVVKWNIEDAI------RAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDAT 398 (595)
T ss_dssp EEEE----------CTTSEEEEEETTTTEEEEEEHHHHH------HHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCC
T ss_pred eEEE----------CCCCeEEEEEecCCcEEEEEhhHhh------hhhcccccceeEEEeecccccccceeccceEeCCC
Confidence 3333 3566666666678999999987621 011000000000000 133322234567899
Q ss_pred CcEEEEec----CC----------eEEEEeCCCC
Q psy12356 236 GRYMISRD----YL----------CVKVWDLHME 255 (400)
Q Consensus 236 g~~las~~----D~----------tIklWD~~~~ 255 (400)
|++|++++ |+ +-.|.|+..+
T Consensus 399 Gk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 399 NDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp SSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred CCEEEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 99998764 32 2389999654
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.052 Score=49.53 Aligned_cols=201 Identities=8% Similarity=-0.022 Sum_probs=106.3
Q ss_pred EEEEEECCCCCeEEEecC--CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 6 REASQRFSDGELLATGDK--GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
...++|+|||.+.++.+. +++|++.|+.+++ +++++.--.. .....+++ ++.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~-----------v~~~i~l~~~-----------~fgeGi~~--~g~-- 76 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGK-----------VENIHKMDDS-----------YFGEGLTL--LNE-- 76 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCC-----------EEEEEECCTT-----------CCEEEEEE--ETT--
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCC-----------EEEEEecCCC-----------cceEEEEE--eCC--
Confidence 467999999876666553 6899999998653 3333321000 00112333 332
Q ss_pred eEEE-eeCCCeEEEEEccCCCc-ccc--c-ccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc-cc
Q psy12356 84 HFLL-STNDQSFNIVDIKPTNM-EEL--N-EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT-NC 157 (400)
Q Consensus 84 ~~l~-ss~D~tI~lWd~~~~~~-~~~--~-~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~-~~ 157 (400)
++.. .-.++.+.++|.++.+. ... . .. ...++++++.++++- .+++|.+.|..+.+.... +.... ..
T Consensus 77 ~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~----I~Vg~~~~ 149 (266)
T 2iwa_A 77 KLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSD-GTSILYEIDPHTFKLIKK----HNVKYNGH 149 (266)
T ss_dssp EEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEE----EECEETTE
T ss_pred EEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEE----EEECCCCc
Confidence 4444 44689999999987762 111 1 11 223566766666654 578999999988743221 10000 00
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccc--cccc--ccCeEEEEEC
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSF--FSEI--ISSISDVKIS 233 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h--~~~V~~v~fS 233 (400)
.... .+++... ++.+.+....++.|.+-|..+++... .+..+. +... ...+ ..-.+.|+|+
T Consensus 150 p~~~-------~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~----~I~~~g---~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 150 RVIR-------LNELEYI-NGEVWANIWQTDCIARISAKDGTLLG----WILLPN---LRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp ECCC-------EEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEE----EEECHH---HHHHHHHTTCTTCCCEEEEEEE
T ss_pred cccc-------ceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEE----EEECCC---cccccccccccccCceEEEEEc
Confidence 0000 0011111 33444555567788888888765421 111000 0000 0000 1245789999
Q ss_pred CCCcEEE-Ee-cCCeEEEEeCCC
Q psy12356 234 NSGRYMI-SR-DYLCVKVWDLHM 254 (400)
Q Consensus 234 pdg~~la-s~-~D~tIklWD~~~ 254 (400)
|+++.+. ++ ....+.+-|+..
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCCEEEEECCCCCeEEEEEEec
Confidence 9988665 54 357777777764
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.047 Score=50.13 Aligned_cols=212 Identities=7% Similarity=0.022 Sum_probs=109.6
Q ss_pred eEEEeeCCCeEEEEEccCCCcc----cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME----ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~----~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+.+++.++.+..+|.+ ++.. .....+.++...+++ . +..++.++.|..+|.. +....... ......
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~~~~~-----~~~~~~ 179 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEKWRFK-----TNDAIT 179 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEEEEEE-----CSSCCC
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEeEEEe-----cCCCce
Confidence 67777778899999987 5521 112334556666654 4 5557778999999988 53221100 000000
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+.+ ..++...+.. +.+..+| .++... +... .....+.++...++|++.
T Consensus 180 ~~~~~----------d~~g~l~v~t---~~l~~~d-~~g~~~------~~~~----------~~~~~~~~~~~~~~g~l~ 229 (330)
T 3hxj_A 180 SAASI----------GKDGTIYFGS---DKVYAIN-PDGTEK------WNFY----------AGYWTVTRPAISEDGTIY 229 (330)
T ss_dssp SCCEE----------CTTCCEEEES---SSEEEEC-TTSCEE------EEEC----------CSSCCCSCCEECTTSCEE
T ss_pred eeeEE----------cCCCEEEEEe---CEEEEEC-CCCcEE------EEEc----------cCCcceeceEECCCCeEE
Confidence 00000 1223232222 6777787 443221 1100 112457788889999988
Q ss_pred EEecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCC
Q psy12356 240 ISRDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQ 319 (400)
Q Consensus 240 as~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg 319 (400)
+++.++.+..+|.. + ..+..+......... + .+. ....++.....+.+. .+.++|
T Consensus 230 v~t~~~gl~~~~~~-g-~~~~~~~~~~~~~~~----------~---~~~--------~~g~l~v~t~~ggl~--~~d~~g 284 (330)
T 3hxj_A 230 VTSLDGHLYAINPD-G-TEKWRFKTGKRIESS----------P---VIG--------NTDTIYFGSYDGHLY--AINPDG 284 (330)
T ss_dssp EEETTTEEEEECTT-S-CEEEEEECSSCCCSC----------C---EEC--------TTSCEEEECTTCEEE--EECTTS
T ss_pred EEcCCCeEEEECCC-C-CEeEEeeCCCCcccc----------c---eEc--------CCCeEEEecCCCCEE--EECCCC
Confidence 88777778777753 3 334444322111000 0 000 011122222222333 345666
Q ss_pred cEEeecccchhhcccccceeEEEEccCCCEEEEecCCeEEEEeCcc
Q psy12356 320 LTVEASPRGIFADAHTYHISSTSVNSDQETYLSADDLRINLWHLEI 365 (400)
Q Consensus 320 ~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~ 365 (400)
+.+.... -....+.++.+.++|+.++.+.++.+++-..+.
T Consensus 285 ~~~~~~~------~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 285 TEKWNFE------TGSWIIATPVIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp CEEEEEE------CSSCCCSCCEECTTCCEEEECTTSCEEEEEC--
T ss_pred cEEEEEE------cCCccccceEEcCCCEEEEEcCCCeEEEEeccc
Confidence 5432111 124567788889999988888899998887654
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.041 Score=49.98 Aligned_cols=194 Identities=8% Similarity=-0.003 Sum_probs=97.8
Q ss_pred EEEEEECCCCCeEEEecCCC--eEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 6 REASQRFSDGELLATGDKGG--RVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
...+.|+ ||.+..+.+.+| +|+++|+.+++ +++.+.-.. ........+++. .
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk-----------v~~~~~l~~-------------~~FgeGit~~g~-~ 98 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK-----------TLQQIELGK-------------RYFGEGISDWKD-K 98 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC-----------EEEEEECCT-------------TCCEEEEEEETT-E
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCc-----------EEEEEecCC-------------ccceeEEEEeCC-E
Confidence 4567888 788888888776 89999998653 333332111 112222233332 2
Q ss_pred eEEEeeCCCeEEEEEccCCCcc-cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceece
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME-ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGL 162 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~-~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (400)
.+.+.-.++.+.++|.++.+.. ...-.-....+.++++.+++|- .+++|.++|..+.+...+.. + ...+..+..+
T Consensus 99 ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~--V-~~~g~~~~~l 174 (262)
T 3nol_A 99 IVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSD-GTPVLRFLDPESLTPVRTIT--V-TAHGEELPEL 174 (262)
T ss_dssp EEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECC-SSSEEEEECTTTCSEEEEEE--C-EETTEECCCE
T ss_pred EEEEEeeCCEEEEEECccCcEEEEEECCCCceEEecCCCEEEEEC-CCCeEEEEcCCCCeEEEEEE--e-ccCCcccccc
Confidence 3334456899999999887631 1110001123335555555554 47889999998875432110 0 0000000000
Q ss_pred eccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCC-CCCcccccccccCeEEEEECCCCcEEE-
Q psy12356 163 IVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPED-PTNKSFFSEIISSISDVKISNSGRYMI- 240 (400)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~V~~v~fSpdg~~la- 240 (400)
+++. ..++...+....++.|.+.|.++++... .+..+.. +...+. ..-..-.+.|||+|+++.|.
T Consensus 175 -------NELe-~~~G~lyan~w~~~~I~vIDp~tG~V~~----~Id~~~L~~~~~~~-~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 175 -------NELE-WVDGEIFANVWQTNKIVRIDPETGKVTG----IIDLNGILAEAGPL-PSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp -------EEEE-EETTEEEEEETTSSEEEEECTTTCBEEE----EEECTTGGGGSCSC-CSSCCCEEEEEEETTTTEEEE
T ss_pred -------ceeE-EECCEEEEEEccCCeEEEEECCCCcEEE----EEECCcCccccccc-cCcCCceEEEEEcCCCCEEEE
Confidence 0001 1134445555567788888888765421 1111100 000000 00012458899999877665
Q ss_pred Ee
Q psy12356 241 SR 242 (400)
Q Consensus 241 s~ 242 (400)
++
T Consensus 242 TG 243 (262)
T 3nol_A 242 TG 243 (262)
T ss_dssp EE
T ss_pred EC
Confidence 44
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.011 Score=62.23 Aligned_cols=110 Identities=12% Similarity=0.022 Sum_probs=67.7
Q ss_pred eEEEEEEC-CCCCeEEEec-----CCCeEEEEEcCCC-CccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 5 MREASQRF-SDGELLATGD-----KGGRVVIFQRDPL-SKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 5 ~v~~v~fs-pdG~~Las~s-----~Dg~I~iwd~~~~-~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
.+...+|| |||++||-+. ...+|+++|+.++ +. +...+. .....++|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~----------l~~~~~---------------~~~~~~~Ws 229 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT----------IADKVS---------------GTNGEIVWG 229 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC----------CCCCEE---------------EECSCCEEC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe----------CCcccc---------------CceeeEEEe
Confidence 67889999 9999999432 2235999999864 20 000111 112357899
Q ss_pred eccCCceEEEeeCC-----CeEEEEEccCCCcc-------cccccEEEEEEecCCCCEEEEEeC--CCeEEEEecccc
Q psy12356 78 RRKNQAHFLLSTND-----QSFNIVDIKPTNME-------ELNEVITAAEFHPIDCNLFVYSSS--KGTIRLCDMRAA 141 (400)
Q Consensus 78 p~~~~~~~l~ss~D-----~tI~lWd~~~~~~~-------~~~~~V~sv~f~p~~~~~las~s~--Dg~i~lWD~~~~ 141 (400)
||+. .++..+.| ..|.++++.++... .......++.|+||+..+++++.. ...|.++|+.++
T Consensus 230 pDg~--~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 230 PDHT--SLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp SSTT--EEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred cCCC--EEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 9874 56655544 36888888765421 112345688999987444334332 346778888765
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.45 Score=42.56 Aligned_cols=109 Identities=13% Similarity=0.081 Sum_probs=63.3
Q ss_pred EEEEEECCCCCeEEEecCCC--eEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 6 REASQRFSDGELLATGDKGG--RVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
...+.|++ +.+..|.+.+| +|+++|+.+++ +++...-... .......+++ +.
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk-----------v~~~~~l~~~-------------~fgeGi~~~~-~~ 76 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGR-----------ILQRAEVPPP-------------YFGAGIVAWR-DR 76 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCC-----------EEEEEECCTT-------------CCEEEEEEET-TE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCC-----------EEEEEeCCCC-------------cceeEEEEeC-CE
Confidence 45678886 67777777654 89999998653 3333321110 1111122233 22
Q ss_pred eEEEeeCCCeEEEEEccCCCcc-cc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNME-EL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~-~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
.+.+.-.++.+.++|.++.+.. .. ...=+++ .++++.+++|- .++.|.++|..+.+.
T Consensus 77 ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwgl--t~dg~~L~vSd-gs~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 77 LIQLTWRNHEGFVYDLATLTPRARFRYPGEGWAL--TSDDSHLYMSD-GTAVIRKLDPDTLQQ 136 (243)
T ss_dssp EEEEESSSSEEEEEETTTTEEEEEEECSSCCCEE--EECSSCEEEEC-SSSEEEEECTTTCCE
T ss_pred EEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEE--eeCCCEEEEEC-CCCeEEEEeCCCCeE
Confidence 3344456899999999887631 11 1111233 35565666665 478899999988754
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.52 Score=43.16 Aligned_cols=196 Identities=14% Similarity=0.101 Sum_probs=103.1
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
....++|+|+|+++++-..+++|+.||.+.. ....+.. . ..+..+++.|++ .
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~------------~~~~~~~-~------------~~p~gia~~~dG---~ 84 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN------------QQIHATV-E------------GKVSGLAFTSNG---D 84 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC------------EEEEEEC-S------------SEEEEEEECTTS---C
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc------------eEEEEeC-C------------CCceeEEEcCCC---c
Confidence 4578999999998888778899999987631 1111111 0 236788888876 3
Q ss_pred EEEee--CCC-eEEEEEccCCCcccc-----cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc--ccccccceeccC
Q psy12356 85 FLLST--NDQ-SFNIVDIKPTNMEEL-----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA--LCDRHSKCLIEG 154 (400)
Q Consensus 85 ~l~ss--~D~-tI~lWd~~~~~~~~~-----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~--~~~~~~~~~~~~ 154 (400)
++++. .++ .|..+|..++++..+ ......+++.+. ...+++-..++.|..+|..++. ..... ......
T Consensus 85 l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~~~v~~~~-~~~~~~ 162 (306)
T 2p4o_A 85 LVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSGSIWLEH-PMLARS 162 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEEEEEEEC-GGGSCS
T ss_pred EEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCC-CcEEEEECCCCeEEEEeCCCCcEeEEEEC-Cccccc
Confidence 44443 233 455566666664211 112345555553 3455655568888888876531 10000 000000
Q ss_pred cccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeeccc-ccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 155 TNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRA-AALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
. ....+.. .+++ .+++ ....+....+.|..+|+.. +... ..+.+. . ......+++
T Consensus 163 ~--~~~~~~~----pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~--~~~~~~------------~-~~~P~gi~v 219 (306)
T 2p4o_A 163 N--SESVFPA----ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPG--EPEIFV------------E-QTNIDDFAF 219 (306)
T ss_dssp S--TTCCSCS----EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBC--CCEEEE------------E-SCCCSSEEE
T ss_pred c--ccCCCCc----CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCC--ccEEEe------------c-cCCCCCeEE
Confidence 0 0000000 0112 1232 3445555678899999864 2110 001110 0 023456899
Q ss_pred CCCCcEEEEe-cCCeEEEEeCC
Q psy12356 233 SNSGRYMISR-DYLCVKVWDLH 253 (400)
Q Consensus 233 Spdg~~las~-~D~tIklWD~~ 253 (400)
+|+|++.++. ..+.|.++|..
T Consensus 220 d~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 220 DVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp BTTCCEEEECBTTCCEEEECTT
T ss_pred CCCCCEEEEeCCCCeEEEECCC
Confidence 9999887764 45778888764
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.13 Score=46.79 Aligned_cols=108 Identities=8% Similarity=-0.041 Sum_probs=64.0
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
...+.|+ ++.+..+.+.+|.|+++|+.+++ +++.+ -.. ........++++ ..+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgk-----------v~~~~-l~~-------------~~FgeGit~~g~-~Ly 109 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQ-----------PVWME-RLG-------------NIFAEGLASDGE-RLY 109 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSS-----------CSEEE-ECT-------------TCCEEEEEECSS-CEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCc-----------EEeEE-CCC-------------CcceeEEEEeCC-EEE
Confidence 3467777 46778888889999999998753 22222 110 011111233432 244
Q ss_pred EEeeCCCeEEEEEccCCCcc-cc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 86 LLSTNDQSFNIVDIKPTNME-EL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~~-~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
.+.-.++.+.++|.++.+.. .. ...-++++ ++++.+++| ..+++|.++|..+.+.
T Consensus 110 ~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vS-dGs~~l~~iDp~T~~v 167 (268)
T 3nok_A 110 QLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRS-DGGTMLTFHEPDGFAL 167 (268)
T ss_dssp EEESSSCEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEE-CSSSEEEEECTTTCCE
T ss_pred EEEccCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEE-CCCCEEEEEcCCCCeE
Confidence 44556899999999887631 11 11112344 455445554 4588999999988754
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.74 Score=40.98 Aligned_cols=151 Identities=8% Similarity=0.083 Sum_probs=85.0
Q ss_pred eeEEEEEeccCCceEEEe-eCCCeEEEEEccCCCcccc----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc
Q psy12356 71 INKIRWLRRKNQAHFLLS-TNDQSFNIVDIKPTNMEEL----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD 145 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~s-s~D~tI~lWd~~~~~~~~~----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~ 145 (400)
+..++|.|++. .+..+ ..++.|..+|++++..... .....+++++|+++.++++....+.|.++|+.....
T Consensus 38 ~~gi~~d~~~~--~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-- 113 (267)
T 1npe_A 38 IIGLAFDCVDK--VVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-- 113 (267)
T ss_dssp EEEEEEETTTT--EEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred EEEEEEecCCC--EEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--
Confidence 66889988642 44444 5678999999876643211 134678999997667777777788999999865421
Q ss_pred cccceeccCcccceeceeccCchhhhhhccc-CcceeecCCC--CCeEEEeecccccccCcccccccCCCCCCCcccccc
Q psy12356 146 RHSKCLIEGTNCNCQGLIVPESKREERQSSQ-NRREKEDNRR--KPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222 (400)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
..+.........++.+. + .+....+... .+.|..+++..... +.+. ..
T Consensus 114 ---~~~~~~~~~~P~~i~vd----------~~~g~lyv~~~~~~~~~I~~~~~dg~~~-----~~~~-----------~~ 164 (267)
T 1npe_A 114 ---RVLFDTGLVNPRGIVTD----------PVRGNLYWTDWNRDNPKIETSHMDGTNR-----RILA-----------QD 164 (267)
T ss_dssp ---EEEECSSCSSEEEEEEE----------TTTTEEEEEECCSSSCEEEEEETTSCCC-----EEEE-----------CT
T ss_pred ---EEEEECCCCCccEEEEe----------eCCCEEEEEECCCCCcEEEEEecCCCCc-----EEEE-----------EC
Confidence 00100000111122221 2 2333222222 45777666542110 1110 01
Q ss_pred cccCeEEEEECCCCcEEE-E-ecCCeEEEEeCCC
Q psy12356 223 IISSISDVKISNSGRYMI-S-RDYLCVKVWDLHM 254 (400)
Q Consensus 223 h~~~V~~v~fSpdg~~la-s-~~D~tIklWD~~~ 254 (400)
.......++++|+++.|. + ...+.|.++|...
T Consensus 165 ~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 165 NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 113467899999877654 4 3468999999874
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.12 Score=53.75 Aligned_cols=81 Identities=14% Similarity=0.171 Sum_probs=46.3
Q ss_pred EEEECCCCCeEEEecCCCe-------------------EEEEEcCCCCccccCCCCcceeeeeeec--cCcchhhccccc
Q psy12356 8 ASQRFSDGELLATGDKGGR-------------------VVIFQRDPLSKTSIPKRGEYNVYSTFQS--HEPEFDYLKSLE 66 (400)
Q Consensus 8 ~v~fspdG~~Las~s~Dg~-------------------I~iwd~~~~~~~~~~~~~~~~~~~~~~~--h~~~~~~~~~~~ 66 (400)
.++|+|++++|..++.++. |.-||..+++. +=.++. |. ..++-
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~-----------~W~~~~~~~d-~wd~~---- 302 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEY-----------VWHYQTTPGD-AWDYT---- 302 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCE-----------EEEEESSTTC-CSCCC----
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCce-----------eEeeecCCcc-ccccc----
Confidence 5789999999999988864 89999887541 112221 21 00000
Q ss_pred ccceeeEEEEEeccCC-ceEEEeeCCCeEEEEEccCCCc
Q psy12356 67 IEEKINKIRWLRRKNQ-AHFLLSTNDQSFNIVDIKPTNM 104 (400)
Q Consensus 67 ~~~~V~~v~~sp~~~~-~~~l~ss~D~tI~lWd~~~~~~ 104 (400)
....+.......++.. ..++.++.++.++++|.++|++
T Consensus 303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 303 ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 0001111112223311 1355578899999999999874
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.00 E-value=1.4 Score=43.70 Aligned_cols=112 Identities=14% Similarity=0.182 Sum_probs=64.6
Q ss_pred EEEEEECC-C-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEE-------
Q psy12356 6 REASQRFS-D-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW------- 76 (400)
Q Consensus 6 v~~v~fsp-d-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~------- 76 (400)
...|+|+| + +++.++-...+.|++.|..+.. +.++..-... .-.....|+|
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~------------v~~l~~~~~~--------~~~~p~~ia~~~~~~~~ 200 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM------------LSSPLNINTI--------PTNRIRSIAFNKKIEGY 200 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTE------------EEEEECCTTS--------SCSBEEEEEECCCBTTT
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCE------------EEEEEccCcc--------ccCCCcEEEEeeccccc
Confidence 56899999 3 4555554445778888887531 2233211100 0023678999
Q ss_pred EeccCCceEEEeeCCC-------eEEEEEccC-CCccc------cc--ccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 77 LRRKNQAHFLLSTNDQ-------SFNIVDIKP-TNMEE------LN--EVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 77 sp~~~~~~~l~ss~D~-------tI~lWd~~~-~~~~~------~~--~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
.+++. .++++...+ .|.+.+... +.+.. +. .....++++|+++.++++-..++.|..+|+.
T Consensus 201 d~~G~--~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 201 ADEAE--YMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp BCTTC--EEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCCCC--EEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 88763 455554322 255555443 33321 10 1234678888766777777778888888887
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.048 Score=57.31 Aligned_cols=57 Identities=7% Similarity=0.120 Sum_probs=36.9
Q ss_pred eeEEEEE-eccCCceEEEe-eCC----CeEEEEEccCC-Cc-c-cccccEEEEEEecCCCCEEEEEeCC
Q psy12356 71 INKIRWL-RRKNQAHFLLS-TND----QSFNIVDIKPT-NM-E-ELNEVITAAEFHPIDCNLFVYSSSK 130 (400)
Q Consensus 71 V~~v~~s-p~~~~~~~l~s-s~D----~tI~lWd~~~~-~~-~-~~~~~V~sv~f~p~~~~~las~s~D 130 (400)
+...+|| ||+. .++.+ ..+ .+|+++|++++ +. . .......+++|+||+ +.|+..+.|
T Consensus 176 ~~~~~~S~PDG~--~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg-~~l~y~~~d 241 (751)
T 2xe4_A 176 VMEVKPAPPEHD--LVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDH-TSLFYVTKD 241 (751)
T ss_dssp EEEEEECTTTTC--EEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSST-TEEEEEEEC
T ss_pred EeeeEecCCCCC--EEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCC-CEEEEEEEC
Confidence 5678999 9874 55543 222 36999999988 62 1 122223468899986 566666654
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=95.86 E-value=0.16 Score=52.77 Aligned_cols=59 Identities=10% Similarity=0.046 Sum_probs=38.3
Q ss_pred CCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE-EecCCeEEEEeCCCCCCceeeec
Q psy12356 187 KPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI-SRDYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 187 dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la-s~~D~tIklWD~~~~~~~l~~~~ 263 (400)
.|.|..||+++++.. |.. .+..++....++++|.++. ++.|+.+++||.+++. .+..+.
T Consensus 456 ~g~l~A~D~~tG~~~------W~~-----------~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~-~lw~~~ 515 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAA------WSV-----------EHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE-KLWEAP 515 (677)
T ss_dssp EEEEEEEETTTTEEE------EEE-----------EESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC-EEEEEE
T ss_pred ccEEEEEeCCCCcEE------eec-----------CCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc-eeeeee
Confidence 478999999887532 211 1112333445666666665 4568999999999974 677765
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=95.72 E-value=1.6 Score=42.32 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=20.8
Q ss_pred ceeEEEEc-cCCCEEEE-ecCCeEEEEeCc
Q psy12356 337 HISSTSVN-SDQETYLS-ADDLRINLWHLE 364 (400)
Q Consensus 337 ~V~~i~fs-pDg~~las-~~D~~i~lW~~~ 364 (400)
....|+++ ++|.++++ ...+.||..+++
T Consensus 403 ~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 403 HPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp SEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 46789999 67777776 357788887654
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.7 Score=42.49 Aligned_cols=115 Identities=8% Similarity=-0.084 Sum_probs=66.1
Q ss_pred eEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe-ccCC
Q psy12356 5 MREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR-RKNQ 82 (400)
Q Consensus 5 ~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp-~~~~ 82 (400)
.+..++++| +|+++++ ...+.|..+|..++ .. ..+...... ..-...+.+++.| ++.
T Consensus 81 ~p~gi~~~~~~g~l~v~-d~~~~i~~~d~~~g---------~~---~~~~~~~~~-------~~~~~p~~i~~d~~~G~- 139 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIV-DCYYHLSVVGSEGG---------HA---TQLATSVDG-------VPFKWLYAVTVDQRTGI- 139 (322)
T ss_dssp CEEEEEEETTTTEEEEE-ETTTEEEEECTTCE---------EC---EEEESEETT-------EECSCEEEEEECTTTCC-
T ss_pred CCceEEEcCCCCcEEEE-ECCCCEEEEeCCCC---------EE---EEecccCCC-------CcccccceEEEecCCCE-
Confidence 478899998 6765554 44455888886532 11 122111000 0001256788887 652
Q ss_pred ceEEEeeC-----------------CCeEEEEEccCCCccccc---ccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 83 AHFLLSTN-----------------DQSFNIVDIKPTNMEELN---EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 83 ~~~l~ss~-----------------D~tI~lWd~~~~~~~~~~---~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+++... ++.|..+|.++++..... ..-+.++|+|++..++++-..++.|..+|+...
T Consensus 140 -l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 140 -VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp -EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred -EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 4444221 356777887666532211 224578999986446666667789999998754
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=95.65 E-value=1.1 Score=39.79 Aligned_cols=199 Identities=10% Similarity=-0.012 Sum_probs=107.6
Q ss_pred eEEEEEECCCCCeE-EEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELL-ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~L-as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+..++|+|+++.| ++-..++.|.+++.++.. . ..+.... -.....+++.|++.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-----------~-~~~~~~~-----------~~~p~~ia~d~~~~-- 91 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-----------P-TTIIRQD-----------LGSPEGIALDHLGR-- 91 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-----------C-EEEECTT-----------CCCEEEEEEETTTT--
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-----------c-EEEEECC-----------CCCccEEEEEecCC--
Confidence 35689999966544 455567899999987431 1 1111100 02367788988642
Q ss_pred eEEE-eeCCCeEEEEEccCCCcccc---c-ccEEEEEEecCCCCEEEEEeC--CCeEEEEecccccccccccceeccCcc
Q psy12356 84 HFLL-STNDQSFNIVDIKPTNMEEL---N-EVITAAEFHPIDCNLFVYSSS--KGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 84 ~~l~-ss~D~tI~lWd~~~~~~~~~---~-~~V~sv~f~p~~~~~las~s~--Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
.+.. ....+.|.+++++....+.. . ..-..++++|+++.++++... .+.|..+++..... . .+.....
T Consensus 92 ~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~----~~~~~~~ 166 (267)
T 1npe_A 92 TIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-R----ILAQDNL 166 (267)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-E----EEECTTC
T ss_pred eEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-E----EEEECCC
Confidence 4444 45678899999875432111 1 345789999976666666544 46888888764311 0 0100000
Q ss_pred cceeceeccCchhhhhhccc-CcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 157 CNCQGLIVPESKREERQSSQ-NRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
....++.+. + .+....+....+.|..+|....... ..+. + ...-..++.. +
T Consensus 167 ~~P~gia~d----------~~~~~lyv~d~~~~~I~~~~~~g~~~~----~~~~------------~-~~~P~gi~~d-~ 218 (267)
T 1npe_A 167 GLPNGLTFD----------AFSSQLCWVDAGTHRAECLNPAQPGRR----KVLE------------G-LQYPFAVTSY-G 218 (267)
T ss_dssp SCEEEEEEE----------TTTTEEEEEETTTTEEEEEETTEEEEE----EEEE------------C-CCSEEEEEEE-T
T ss_pred CCCcEEEEc----------CCCCEEEEEECCCCEEEEEecCCCceE----EEec------------C-CCCceEEEEe-C
Confidence 111122221 2 2344444456788999988643210 0110 0 0122455553 3
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
+.+.++. ..+.|..+|..++. .++++
T Consensus 219 ~~lyva~~~~~~v~~~d~~~g~-~~~~i 245 (267)
T 1npe_A 219 KNLYYTDWKTNSVIAMDLAISK-EMDTF 245 (267)
T ss_dssp TEEEEEETTTTEEEEEETTTTE-EEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCCC-ceEEE
Confidence 4444453 46889999988753 34444
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=1.6 Score=41.04 Aligned_cols=27 Identities=22% Similarity=0.422 Sum_probs=21.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEc
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQR 32 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~ 32 (400)
....++|.|||+++++ ..+|.|++++.
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~ 56 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISP 56 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECS
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeC
Confidence 4678999999986665 45699999973
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=95.51 E-value=2.9 Score=43.71 Aligned_cols=204 Identities=8% Similarity=0.055 Sum_probs=107.7
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.++...++|++-+ |..++-+..|+..+.. . ..+. +...... .++ ....|.++...+++ .
T Consensus 358 ~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~---------~---~~~~-~~~~~~~-~~l-~~~~v~~i~~d~~g---~ 418 (795)
T 4a2l_A 358 VVSCIVEDKDKNLWI-GTNDGGLNLYNPITQR---------F---TSYT-LQEDESA-RGI-GSNNIKAVYVDEKK---S 418 (795)
T ss_dssp SEEEEEECTTSCEEE-EESSSCEEEECTTTCC---------E---EEEC-CC-------CC-SCSCEEEEEEETTT---T
T ss_pred eeEEEEECCCCCEEE-EECCCCeEEEcCCCCc---------E---EEEe-cCCCCcc-cCC-CCccEEEEEEcCCC---C
Confidence 488898999998655 6666678888876431 1 1111 0000000 000 01237777665443 5
Q ss_pred -EEEeeCCCeEEEEEccCCCcccc--------cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccc-eeccC
Q psy12356 85 -FLLSTNDQSFNIVDIKPTNMEEL--------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSK-CLIEG 154 (400)
Q Consensus 85 -~l~ss~D~tI~lWd~~~~~~~~~--------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~-~~~~~ 154 (400)
+.+++.++-+.++|.+++++... ...|.++...+++ ++.+.+ .+ -+.+||..++....-... ....+
T Consensus 419 ~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~ 495 (795)
T 4a2l_A 419 LVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG-NLWLGT-LS-ALVRFNPEQRSFTTIEKEKDGTPV 495 (795)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS-CEEEEE-SS-CEEEEETTTTEEEECCBCTTCCBC
T ss_pred EEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC-CEEEEe-cC-ceeEEeCCCCeEEEcccccccccc
Confidence 77777777789999887764321 2468899888864 555544 34 488899877632110000 00000
Q ss_pred cccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 155 TNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
....+..+.. -.++ ..+++ . +.+..||..+... . +.... ... ......|.++...
T Consensus 496 ~~~~i~~i~~----------d~~g~lWigt--~-~Gl~~~~~~~~~~--~----~~~~~---~~~--~l~~~~i~~i~~d 551 (795)
T 4a2l_A 496 VSKQITTLFR----------DSHKRLWIGG--E-EGLSVFKQEGLDI--Q----KASIL---PVS--NVTKLFTNCIYEA 551 (795)
T ss_dssp CCCCEEEEEE----------CTTCCEEEEE--S-SCEEEEEEETTEE--E----ECCCS---CSC--GGGGSCEEEEEEC
T ss_pred CCceEEEEEE----------CCCCCEEEEe--C-CceEEEeCCCCeE--E----EecCC---CCC--CCCCCeeEEEEEC
Confidence 0011111111 1223 23333 2 4577778765332 1 10000 000 0123579999999
Q ss_pred CCCcEEEEecCCeEEEEeCCCC
Q psy12356 234 NSGRYMISRDYLCVKVWDLHME 255 (400)
Q Consensus 234 pdg~~las~~D~tIklWD~~~~ 255 (400)
++|++.+++.. -+..||..++
T Consensus 552 ~~g~lWigT~~-Gl~~~d~~~~ 572 (795)
T 4a2l_A 552 SNGIIWVGTRE-GFYCFNEKDK 572 (795)
T ss_dssp TTSCEEEEESS-CEEEEETTTT
T ss_pred CCCCEEEEeCC-CceeECCCCC
Confidence 99998877655 6778888754
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=95.47 E-value=1.3 Score=39.51 Aligned_cols=172 Identities=11% Similarity=0.057 Sum_probs=96.4
Q ss_pred CcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCC--CeEEEEEccCCCcc-c--ccccE--EEEEE
Q psy12356 44 GEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTND--QSFNIVDIKPTNME-E--LNEVI--TAAEF 116 (400)
Q Consensus 44 ~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D--~tI~lWd~~~~~~~-~--~~~~V--~sv~f 116 (400)
..+++++++ .|.+. .-...+.|++ + ..+.+++.+ ..|+..|+++++.. . +.... -++++
T Consensus 7 ~~~~v~~~~-phd~~----------~ftqGL~~~~-~--~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~ 72 (243)
T 3mbr_X 7 QGYRVVKRY-PHDTT----------AFTEGLFYLR-G--HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA 72 (243)
T ss_dssp CCEEEEEEE-ECCTT----------CCEEEEEEET-T--EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE
T ss_pred cceEEEEEc-CCCCc----------cccccEEEEC-C--EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEE
Confidence 345667777 66543 2356788875 2 234444543 59999999999842 1 12222 34444
Q ss_pred ecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecc
Q psy12356 117 HPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMR 196 (400)
Q Consensus 117 ~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~ 196 (400)
. ++.+++..-.++.+.++|..+.++..++.- . ...|++.. .......+.+ ++.|.++|..
T Consensus 73 ~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~---~---~~Gwglt~-----------dg~~L~vSdg-s~~l~~iDp~ 132 (243)
T 3mbr_X 73 W--RDRLIQLTWRNHEGFVYDLATLTPRARFRY---P---GEGWALTS-----------DDSHLYMSDG-TAVIRKLDPD 132 (243)
T ss_dssp E--TTEEEEEESSSSEEEEEETTTTEEEEEEEC---S---SCCCEEEE-----------CSSCEEEECS-SSEEEEECTT
T ss_pred e--CCEEEEEEeeCCEEEEEECCcCcEEEEEeC---C---CCceEEee-----------CCCEEEEECC-CCeEEEEeCC
Confidence 4 446777777799999999998865433211 0 01122211 1222333333 7789999988
Q ss_pred cccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 197 AAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
+.+.... +..-. .. . . ...++.+.|. +|++.|.. .+..|.+-|.+++. .+..+
T Consensus 133 t~~~~~~-I~V~~-~g------~--~-~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~-V~~~i 186 (243)
T 3mbr_X 133 TLQQVGS-IKVTA-GG------R--P-LDNLNELEWV-NGELLANVWLTSRIARIDPASGK-VVAWI 186 (243)
T ss_dssp TCCEEEE-EECEE-TT------E--E-CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB-EEEEE
T ss_pred CCeEEEE-EEEcc-CC------c--c-cccceeeEEe-CCEEEEEECCCCeEEEEECCCCC-EEEEE
Confidence 7543211 11100 00 0 0 0234556664 78877655 46799999999874 45555
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=3.2 Score=43.36 Aligned_cols=197 Identities=10% Similarity=0.108 Sum_probs=105.6
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeee-ccCcchhhcccccccce-eeEEEEEeccCCc
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ-SHEPEFDYLKSLEIEEK-INKIRWLRRKNQA 83 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~-V~~v~~sp~~~~~ 83 (400)
|.++...++|++.+... +.+.+||..+.+ + ..+. ++. ... |.++...+++
T Consensus 133 i~~i~~d~~g~lwi~t~--~gl~~~~~~~~~-----------~-~~~~~~~~-----------~~~~i~~i~~d~~g--- 184 (795)
T 4a2l_A 133 VNGIEEISPEQLLISTP--EGLIMFDIKESK-----------F-IDDSFSTA-----------MHKTIASTLYRQGD--- 184 (795)
T ss_dssp CCEEEEEETTEEEEEET--TEEEEEETTTTE-----------E-ECSSSCHH-----------HHTCCEEEEEEETT---
T ss_pred EEEEEECCCCCEEEEEC--CceEEEECCCCE-----------E-EeccCCCC-----------CCcceEEEEECCCC---
Confidence 77788888888776543 458888875421 1 1111 000 012 6667666554
Q ss_pred eEEEeeCCCeEEEEEccCCCcccc-----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccce--eccCcc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEEL-----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKC--LIEGTN 156 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~~-----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~--~~~~~~ 156 (400)
.+.+++.++-+..||.+++++... ...|.++...+++ .+.+. +.++-+..||..++....-.... ...+..
T Consensus 185 ~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g-~lwig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (795)
T 4a2l_A 185 QIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPT-RIWVA-TEGAGLFLINPKTKEIKNYLHSPSNPKSISS 262 (795)
T ss_dssp EEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETT-EEEEE-EBSSCEEEEETTTTEEEEECCCTTCTTSCSC
T ss_pred CEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCC-CEEEE-ECCCCeEEEeCCCCeEEEeecCCCCccccCC
Confidence 566666655688889877664321 3458888888864 55554 44434888998765321100000 000111
Q ss_pred cceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCccccccc-CCCCCCCcccccccccCeEEEEECC
Q psy12356 157 CNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFE-EPEDPTNKSFFSEIISSISDVKISN 234 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~V~~v~fSp 234 (400)
..+..+.. -.++ ..+++ .+ .+.+||..+... ..+. .+..+ . .-....|.++...+
T Consensus 263 ~~i~~i~~----------d~~g~lWigt--~~-Gl~~~~~~~~~~-----~~~~~~~~~~---~--~l~~~~i~~i~~D~ 319 (795)
T 4a2l_A 263 NYIRSLAM----------DSQNRLWIGT--FN-DLNIYHEGTDSF-----ASYSSNPVEN---G--SLSQRSVRSIFMDS 319 (795)
T ss_dssp SBEEEEEE----------CTTSCEEEEE--SS-CEEEEETTTTEE-----EEECCCTTST---T--SCSSSCEEEEEECT
T ss_pred CeEEEEEE----------cCCCCEEEEe--CC-hhheEcCCCCeE-----EEEecCCCCC---C--CCCCCcEEEEEEeC
Confidence 11111111 1222 33444 23 577888765432 1111 01000 0 01235799999999
Q ss_pred CCcEEEEecCCeEEEEeCCCC
Q psy12356 235 SGRYMISRDYLCVKVWDLHME 255 (400)
Q Consensus 235 dg~~las~~D~tIklWD~~~~ 255 (400)
+|.+-+++.++-|..+|..+.
T Consensus 320 ~g~lWigt~~~Gl~~~~~~~~ 340 (795)
T 4a2l_A 320 QGGMWLGTYFGGLNYYHPIRN 340 (795)
T ss_dssp TSCEEEEESSSCEEEECGGGG
T ss_pred CcCEEEEECCCCeEEeCCCcc
Confidence 999988887778888987653
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=95.36 E-value=1.8 Score=40.41 Aligned_cols=187 Identities=11% Similarity=0.088 Sum_probs=93.4
Q ss_pred CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCe
Q psy12356 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQS 93 (400)
Q Consensus 14 dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~t 93 (400)
++..|..++.++.|..+|..+++. +-.+...... ...... . ++.+++++.++.
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~-----------~W~~~~~~~~------------~~~p~~-~---~~~v~v~~~~g~ 154 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTV-----------AWQTKVAGEA------------LSRPVV-S---DGLVLIHTSNGQ 154 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCE-----------EEEEECSSCC------------CSCCEE-E---TTEEEEECTTSE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE-----------EEEEeCCCce------------EcCCEE-E---CCEEEEEcCCCe
Confidence 455677788899999999876531 1111111100 000111 1 236777788999
Q ss_pred EEEEEccCCCcc---cccccE------EEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceece-e
Q psy12356 94 FNIVDIKPTNME---ELNEVI------TAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGL-I 163 (400)
Q Consensus 94 I~lWd~~~~~~~---~~~~~V------~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~-~ 163 (400)
+..+|.++|+.. .....+ .+.... + ..+..++.++.+..+|.++++..-......... ......+ .
T Consensus 155 l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~-~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~-~~~~~~~~~ 230 (376)
T 3q7m_A 155 LQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--F-GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG-STEIDRLSD 230 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----CCCCCCEEE--T-TEEEECCTTTEEEEEETTTCCEEEEEECCC------------C
T ss_pred EEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--C-CEEEEEcCCCEEEEEECCCCcEEEEEecccCCC-Ccccccccc
Confidence 999999888731 111111 112222 2 356667789999999998885421100000000 0000000 0
Q ss_pred ccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEec
Q psy12356 164 VPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRD 243 (400)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~ 243 (400)
+. ......++.... ++.++.+..+|.++++.. +..+ ......+... ++++.+++.
T Consensus 231 ~~-----~~p~~~~~~v~~-~~~~g~l~~~d~~tG~~~------w~~~------------~~~~~~~~~~-~~~l~~~~~ 285 (376)
T 3q7m_A 231 VD-----TTPVVVNGVVFA-LAYNGNLTALDLRSGQIM------WKRE------------LGSVNDFIVD-GNRIYLVDQ 285 (376)
T ss_dssp CC-----CCCEEETTEEEE-ECTTSCEEEEETTTCCEE------EEEC------------CCCEEEEEEE-TTEEEEEET
T ss_pred cC-----CCcEEECCEEEE-EecCcEEEEEECCCCcEE------eecc------------CCCCCCceEE-CCEEEEEcC
Confidence 00 000001122222 235788999998876531 1111 1122333332 555556677
Q ss_pred CCeEEEEeCCCCC
Q psy12356 244 YLCVKVWDLHMES 256 (400)
Q Consensus 244 D~tIklWD~~~~~ 256 (400)
++.+..+|..++.
T Consensus 286 ~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 286 NDRVMALTIDGGV 298 (376)
T ss_dssp TCCEEEEETTTCC
T ss_pred CCeEEEEECCCCc
Confidence 8899999999874
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.11 Score=50.86 Aligned_cols=112 Identities=14% Similarity=0.089 Sum_probs=69.0
Q ss_pred EEEECCCCCeEEEec-------------------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhccccccc
Q psy12356 8 ASQRFSDGELLATGD-------------------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIE 68 (400)
Q Consensus 8 ~v~fspdG~~Las~s-------------------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 68 (400)
.+.|+|+++.+++.. .+.+|.+||+.+. +.++++.--.. .
T Consensus 192 d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-----------k~~~tI~vg~~----------g 250 (462)
T 2ece_A 192 DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-----------KRIHSLTLGEE----------N 250 (462)
T ss_dssp CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-----------EEEEEEESCTT----------E
T ss_pred eEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC-----------cEeeEEecCCC----------C
Confidence 467899999988885 3689999999853 23333332100 0
Q ss_pred ceeeEEEE--EeccCCceEEEee-----CCCeEEEEEccCCCcc-------------c-c----------cccEEEEEEe
Q psy12356 69 EKINKIRW--LRRKNQAHFLLST-----NDQSFNIVDIKPTNME-------------E-L----------NEVITAAEFH 117 (400)
Q Consensus 69 ~~V~~v~~--sp~~~~~~~l~ss-----~D~tI~lWd~~~~~~~-------------~-~----------~~~V~sv~f~ 117 (400)
.....|+| +|++. ..++++- -+++|.+|..+.+... . + ......+.++
T Consensus 251 ~~P~~i~f~~~Pdg~-~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 251 RMALELRPLHDPTKL-MGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEECSSTTCC-EEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CccceeEeeECCCCC-EEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 12445666 77763 1233344 5667866555443210 0 0 1235788999
Q ss_pred cCCCCEEEEEeCCCeEEEEecccc
Q psy12356 118 PIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 118 p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
|||..++++.-..+.|.++|+...
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSST
T ss_pred CCCCEEEEEeCCCCEEEEEEecCC
Confidence 998666676666899999998643
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.27 E-value=0.49 Score=46.05 Aligned_cols=111 Identities=17% Similarity=0.196 Sum_probs=60.8
Q ss_pred eEEEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
....|+|+| ++..|..+...+.|+.+|..+.. +..+.... .....|+|.++++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~------------v~~~~~~~------------~~P~~ia~d~~G~-- 191 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY------------VSTVYSGL------------SKVRTICWTHEAD-- 191 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE------------EEEEECCC------------SCEEEEEECTTSS--
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE------------EEEEecCC------------CCcceEEEeCCCC--
Confidence 356889998 45555555555889999987421 12222111 2367899988763
Q ss_pred eEEEeeC-CC---eEEEEEccCCCcc---cc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLSTN-DQ---SFNIVDIKPTNME---EL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss~-D~---tI~lWd~~~~~~~---~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+.++.. ++ ...+|....+.+. .+ .....+++++|+++.++++-..++.|..+|..++
T Consensus 192 ~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 192 SMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp EEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred EEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 4555432 11 2223333333322 11 1123567788854566666666677777776544
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=95.20 E-value=0.6 Score=42.26 Aligned_cols=155 Identities=9% Similarity=0.046 Sum_probs=87.3
Q ss_pred eeEEEEEeccCCceEEEeeCCC--eEEEEEccCCCcc-c--ccccE--EEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 71 INKIRWLRRKNQAHFLLSTNDQ--SFNIVDIKPTNME-E--LNEVI--TAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~D~--tI~lWd~~~~~~~-~--~~~~V--~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
...+.|+ ++ ..+.+++.++ .|+..|+++++.. . ..... -++++. ++.+++..-.++.+.++|..+.++
T Consensus 45 tqGL~~~-~~--~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 45 TEGFFYR-NG--YFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEEE-TT--EEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCE
T ss_pred cceEEEE-CC--EEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcE
Confidence 4567887 43 2444556555 9999999999842 1 12222 234443 446677766799999999998865
Q ss_pred cccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccc
Q psy12356 144 CDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEI 223 (400)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 223 (400)
..++.- . ...+++.. .......+. .++.|.++|..+.+.... +..-. .+.
T Consensus 120 ~~ti~~---~---~eG~glt~-----------dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~-I~V~~-----------~g~ 169 (262)
T 3nol_A 120 VRSFNY---D---GEGWGLTH-----------NDQYLIMSD-GTPVLRFLDPESLTPVRT-ITVTA-----------HGE 169 (262)
T ss_dssp EEEEEC---S---SCCCCEEE-----------CSSCEEECC-SSSEEEEECTTTCSEEEE-EECEE-----------TTE
T ss_pred EEEEEC---C---CCceEEec-----------CCCEEEEEC-CCCeEEEEcCCCCeEEEE-EEecc-----------CCc
Confidence 432210 0 01122211 122233333 267899999887543211 11100 000
Q ss_pred -ccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 224 -ISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 224 -~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
...++.+.|. +|++.|.. .+.+|.+.|.+++. .+..+
T Consensus 170 ~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~-V~~~I 208 (262)
T 3nol_A 170 ELPELNELEWV-DGEIFANVWQTNKIVRIDPETGK-VTGII 208 (262)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCB-EEEEE
T ss_pred cccccceeEEE-CCEEEEEEccCCeEEEEECCCCc-EEEEE
Confidence 1234567776 88877765 46899999999874 45555
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=95.19 E-value=0.056 Score=56.15 Aligned_cols=51 Identities=8% Similarity=0.035 Sum_probs=36.7
Q ss_pred CeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 92 QSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 92 ~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
++|..||+.+|+.. .+...+.+..+.+.+ .+++.++.|+.++.||+++++.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAG-NVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCC-CEEEEECCCCcEEEEECCCCce
Confidence 78999999988731 222233444566655 5677788999999999999954
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.17 E-value=2.1 Score=40.14 Aligned_cols=26 Identities=27% Similarity=0.518 Sum_probs=21.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEE
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQ 31 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd 31 (400)
....++|.|||+++++ ..+|.|++++
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~ 57 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR 57 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE
Confidence 4678999999996665 4569999998
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.24 Score=45.06 Aligned_cols=110 Identities=9% Similarity=0.135 Sum_probs=72.0
Q ss_pred EECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEee
Q psy12356 10 QRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLST 89 (400)
Q Consensus 10 ~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss 89 (400)
.+++||++|..+..+++|.++|..+.+ ..+++.--... . .-..++.+.|. ++ ++.+..
T Consensus 111 glt~Dg~~l~vs~gs~~l~viD~~t~~-----------v~~~I~Vg~~~-~------p~~~~nele~~-dg---~lyvn~ 168 (266)
T 2iwa_A 111 GLATDGKILYGSDGTSILYEIDPHTFK-----------LIKKHNVKYNG-H------RVIRLNELEYI-NG---EVWANI 168 (266)
T ss_dssp EEEECSSSEEEECSSSEEEEECTTTCC-----------EEEEEECEETT-E------ECCCEEEEEEE-TT---EEEEEE
T ss_pred EEEECCCEEEEECCCCeEEEEECCCCc-----------EEEEEEECCCC-c------ccccceeEEEE-CC---EEEEec
Confidence 467788877777778889999987532 23333211000 0 00125667776 43 454543
Q ss_pred -CCCeEEEEEccCCCccc---cc--------------ccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 90 -NDQSFNIVDIKPTNMEE---LN--------------EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 90 -~D~tI~lWd~~~~~~~~---~~--------------~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+++|.+-|.++++... .. ...++++|+|+++.+|+++.....+..-|+...
T Consensus 169 ~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 169 WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 57899999999987311 11 245899999998788888888899988888765
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=94.75 E-value=4.7 Score=42.00 Aligned_cols=110 Identities=8% Similarity=0.105 Sum_probs=61.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.++...++|++.+ |..++-+..+|..+++ . ..+.... + ....|.++...++ +
T Consensus 407 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~---------~---~~~~~~~-----~----~~~~v~~i~~d~~---g 461 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK---------F---QIIELEK-----N----ELLDVRVFYEDKN---K 461 (781)
T ss_dssp SBEEEEEECTTSCEEE-EETTEEEEEECSSSCE---------E---EECCSTT-----T----CCCCEEEEEECTT---S
T ss_pred cceEEEEECCCCCEEE-EeccCCEEEEcCCCCc---------E---EEeccCC-----C----CCCeEEEEEECCC---C
Confidence 3578888888887666 5555668888865421 1 1111000 0 0123666665443 3
Q ss_pred eEEEeeCCCeEEEEEccCCCcccc---------cccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEEL---------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~~---------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+..++. +-+..+|.+++.+... ...|.++...+++ .+.+....+| +..+|..++
T Consensus 462 ~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigt~~~G-l~~~~~~~~ 525 (781)
T 3v9f_A 462 KIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEG-RFWIGTFGGG-VGIYTPDMQ 525 (781)
T ss_dssp EEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTC-CEEEEESSSC-EEEECTTCC
T ss_pred CEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCC-CEEEEEcCCC-EEEEeCCCC
Confidence 6666665 4577888877654211 2458888888764 5554433344 555675544
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=94.65 E-value=0.25 Score=47.16 Aligned_cols=69 Identities=7% Similarity=-0.014 Sum_probs=49.5
Q ss_pred EEEEeccCCceEEEe-e---C-----CCeEEEEEccCCCc-ccc--cccEEEEEEecCCCCEEEEEe-CCCeEEEEeccc
Q psy12356 74 IRWLRRKNQAHFLLS-T---N-----DQSFNIVDIKPTNM-EEL--NEVITAAEFHPIDCNLFVYSS-SKGTIRLCDMRA 140 (400)
Q Consensus 74 v~~sp~~~~~~~l~s-s---~-----D~tI~lWd~~~~~~-~~~--~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~~~ 140 (400)
++++|++. ++.++ . . +..+.++|+++++. ..+ .....+++|+|++..++++.. .+++|.++|+.+
T Consensus 269 v~~s~dg~--~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 269 VAKLKNTD--GIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEETTTT--EEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eEEcCCCC--EEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 67999874 55543 3 2 23556999998873 222 235678999999766788888 699999999999
Q ss_pred cccc
Q psy12356 141 AALC 144 (400)
Q Consensus 141 ~~~~ 144 (400)
.+.+
T Consensus 347 ~kvv 350 (368)
T 1mda_H 347 DQDQ 350 (368)
T ss_dssp CEEE
T ss_pred CcEE
Confidence 8543
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=94.49 E-value=2.7 Score=38.16 Aligned_cols=109 Identities=16% Similarity=0.150 Sum_probs=59.1
Q ss_pred eEEEEEECCCCCeEEEecCCC--eEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 5 MREASQRFSDGELLATGDKGG--RVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.+..++|+|||+++++..... .|..++..+++ .+.+..+... .....++..+.
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~---------~~~~~~~~~~-------------~~~~g~~~~~~--- 127 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT---------VETLLTLPDA-------------IFLNGITPLSD--- 127 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC---------EEEEEECTTC-------------SCEEEEEESSS---
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe---------EEEEEeCCCc-------------cccCcccccCC---
Confidence 567899999999777654332 46666655432 1111111000 01122333222
Q ss_pred ceEEEe-eCCCeEEEEEccCCC--cc---------cc-c--ccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 83 AHFLLS-TNDQSFNIVDIKPTN--ME---------EL-N--EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 83 ~~~l~s-s~D~tI~lWd~~~~~--~~---------~~-~--~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
..++++ ..++.|..+|..++. .. .. . ...+.+ +|+++.++++-...+.|..+|+..
T Consensus 128 ~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 128 TQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred CcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 244444 357777777765431 10 00 1 124555 787666777777789999999875
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.62 Score=42.38 Aligned_cols=132 Identities=7% Similarity=-0.103 Sum_probs=67.3
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+.+++ +.+..+| .+++. ......+.++.+.+++ .+ ..++.++.|..+|...... .... . .....
T Consensus 189 ~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g-~l-~v~t~~~gl~~~~~~g~~~-~~~~----~-~~~~~ 257 (330)
T 3hxj_A 189 TIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG-TI-YVTSLDGHLYAINPDGTEK-WRFK----T-GKRIE 257 (330)
T ss_dssp CEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS-CE-EEEETTTEEEEECTTSCEE-EEEE----C-SSCCC
T ss_pred EEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCC-eE-EEEcCCCeEEEECCCCCEe-EEee----C-CCCcc
Confidence 455555 7788888 55542 1112346677777764 44 4456677777777533311 1000 0 00000
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
.... ...++.... ++.+|.+..+|. ++... ..+. .....+.++...++|++.
T Consensus 258 ~~~~----------~~~~g~l~v-~t~~ggl~~~d~-~g~~~----~~~~------------~~~~~~~~~~~d~~g~l~ 309 (330)
T 3hxj_A 258 SSPV----------IGNTDTIYF-GSYDGHLYAINP-DGTEK----WNFE------------TGSWIIATPVIDENGTIY 309 (330)
T ss_dssp SCCE----------ECTTSCEEE-ECTTCEEEEECT-TSCEE----EEEE------------CSSCCCSCCEECTTCCEE
T ss_pred ccce----------EcCCCeEEE-ecCCCCEEEECC-CCcEE----EEEE------------cCCccccceEEcCCCEEE
Confidence 0000 011222222 235677888885 33221 1111 012346677788999999
Q ss_pred EEecCCeEEEEeCCC
Q psy12356 240 ISRDYLCVKVWDLHM 254 (400)
Q Consensus 240 as~~D~tIklWD~~~ 254 (400)
+++.+|.+++-..+.
T Consensus 310 ~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 310 FGTRNGKFYALFNLE 324 (330)
T ss_dssp EECTTSCEEEEEC--
T ss_pred EEcCCCeEEEEeccc
Confidence 988899998877664
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.33 E-value=2.8 Score=37.63 Aligned_cols=118 Identities=11% Similarity=0.243 Sum_probs=69.8
Q ss_pred EEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeee-ccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 7 EASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 7 ~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
-.|++.++|.++++.-.++.+.++++.... ....+.... ... ..........|+|.|.++ ++
T Consensus 73 EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~--------~i~~~~~~~~~~~-------~~~~N~g~EGLA~d~~~~--~L 135 (255)
T 3qqz_A 73 ETIEYIGDNQFVISDERDYAIYVISLTPNS--------EVKILKKIKIPLQ-------ESPTNCGFEGLAYSRQDH--TF 135 (255)
T ss_dssp EEEEECSTTEEEEEETTTTEEEEEEECTTC--------CEEEEEEEECCCS-------SCCCSSCCEEEEEETTTT--EE
T ss_pred HHeEEeCCCEEEEEECCCCcEEEEEcCCCC--------eeeeeeeeccccc-------cccccCCcceEEEeCCCC--EE
Confidence 367888899887776677899999987542 111111111 000 001123467899999763 56
Q ss_pred EEeeCCCeEEEEEccC----CCccc----------ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 86 LLSTNDQSFNIVDIKP----TNMEE----------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~----~~~~~----------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.++.......||.++. ..+.. ....+.+++|+|..+.+++.+...+.+-..|....
T Consensus 136 ~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 136 WFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp EEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred EEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC
Confidence 6554433445555431 11110 01236789999988778888777888888886543
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=94.30 E-value=3.3 Score=38.75 Aligned_cols=107 Identities=10% Similarity=0.072 Sum_probs=60.6
Q ss_pred EEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEE---EeccCC
Q psy12356 7 EASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW---LRRKNQ 82 (400)
Q Consensus 7 ~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~---sp~~~~ 82 (400)
-+++|.+ +|.++++.-..++|..|+..++. ...+ .+.+=+.+ ......+..|.| -|++
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~---------~~~~-~~~~~s~~------g~~~~~~sGl~~~~~D~~g-- 77 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS---------HFNV-VIDGASSN------GDGEQQMSGLSLLTHDNSK-- 77 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCC---------EEEE-CCTTTCCS------SCCSEEEEEEEESSSSSCC--
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCe---------EEEE-ecCCcccc------CCCcceeeEEEEeccCCCC--
Confidence 3678977 56666666579999999986432 1111 22210000 000012456778 3543
Q ss_pred ceEEEeeC--------------CCeEEEEEcc---CCCcc---cc---c-----------ccEEEEEEecCCCCEEEEEe
Q psy12356 83 AHFLLSTN--------------DQSFNIVDIK---PTNME---EL---N-----------EVITAAEFHPIDCNLFVYSS 128 (400)
Q Consensus 83 ~~~l~ss~--------------D~tI~lWd~~---~~~~~---~~---~-----------~~V~sv~f~p~~~~~las~s 128 (400)
++++... +..+..+|+. +++.. .+ . ...+.++..++| +.+++++
T Consensus 78 -rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s 155 (334)
T 2p9w_A 78 -RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFA 155 (334)
T ss_dssp -EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEE
T ss_pred -cEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC-CEEEeCC
Confidence 5554322 5678889998 66521 11 1 237789999975 7778777
Q ss_pred CC-CeE
Q psy12356 129 SK-GTI 133 (400)
Q Consensus 129 ~D-g~i 133 (400)
.- +.|
T Consensus 156 ~~~~~I 161 (334)
T 2p9w_A 156 LGMPAI 161 (334)
T ss_dssp ESSCEE
T ss_pred CCCCeE
Confidence 65 554
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=94.20 E-value=0.38 Score=46.71 Aligned_cols=108 Identities=12% Similarity=0.151 Sum_probs=64.5
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCC--CcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKR--GEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
.|.-+..||+|++||..+ +..|.|-.+..+........ ...+ .++++-.. . .......|..+.|+|-+..
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q-~~ty~l~~-----~-~~~~~s~I~qVlWHPl~~~ 138 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQ-IFHYSIDE-----E-EVGPKSSIKKVLFHPKSYR 138 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTE-EEEEEGGG-----C-C--CCCCEEEEEECTTBGG
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccc-eeEEEcCC-----c-ccCCCCceeEEEeccccCC
Confidence 677789999999999885 66899999874321100000 0111 11222110 0 0112356999999998753
Q ss_pred -ceEEEeeCCCeEEEEEccCCC-----ccc----c-----cccEEEEEEecCC
Q psy12356 83 -AHFLLSTNDQSFNIVDIKPTN-----MEE----L-----NEVITAAEFHPID 120 (400)
Q Consensus 83 -~~~l~ss~D~tI~lWd~~~~~-----~~~----~-----~~~V~sv~f~p~~ 120 (400)
..+++=..|++||+||+.... +.. . ...|.+++|.+++
T Consensus 139 ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~ 191 (452)
T 3pbp_A 139 DSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDG 191 (452)
T ss_dssp GCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTS
T ss_pred CCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCC
Confidence 455556789999999997632 110 0 1357788888854
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=94.20 E-value=2.5 Score=38.28 Aligned_cols=156 Identities=9% Similarity=0.013 Sum_probs=89.5
Q ss_pred eeEEEEEeccCCceEEEeeCCCeEEEEEccCCCcc-c-ccccE--EEEEEecCCCCEEEEEeCCCeEEEEeccccccccc
Q psy12356 71 INKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNME-E-LNEVI--TAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDR 146 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~-~-~~~~V--~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~ 146 (400)
...+.|+. +..+.+++.++.|+..|+++++.. . +.... -++++. ++.+++..-.++.+.++|..+.++..+
T Consensus 57 tqGL~~~~---~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFHQ---GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEET---TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEEC---CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 45677762 224555677889999999998842 1 22222 235544 456777777799999999998865433
Q ss_pred ccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccC
Q psy12356 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISS 226 (400)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 226 (400)
+.- . ...|++.. .......+. .++.|.++|..+.+.... +..-..+ .....
T Consensus 132 i~~---~---~eGwGLt~-----------Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~-I~V~~~g----------~~v~~ 182 (268)
T 3nok_A 132 TRY---S---GEGWGLCY-----------WNGKLVRSD-GGTMLTFHEPDGFALVGA-VQVKLRG----------QPVEL 182 (268)
T ss_dssp EEC---S---SCCCCEEE-----------ETTEEEEEC-SSSEEEEECTTTCCEEEE-EECEETT----------EECCC
T ss_pred EeC---C---CceeEEec-----------CCCEEEEEC-CCCEEEEEcCCCCeEEEE-EEeCCCC----------ccccc
Confidence 210 0 01122211 112233333 378999999887653211 1110000 00124
Q ss_pred eEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 227 ISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 227 V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
++.+.|. +|++.|.. .+..|.+-|.+++. .+..+
T Consensus 183 lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~-V~~~I 217 (268)
T 3nok_A 183 INELECA-NGVIYANIWHSSDVLEIDPATGT-VVGVI 217 (268)
T ss_dssp EEEEEEE-TTEEEEEETTCSEEEEECTTTCB-EEEEE
T ss_pred ccccEEe-CCEEEEEECCCCeEEEEeCCCCc-EEEEE
Confidence 5667776 88777765 46799999999864 45554
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=94.02 E-value=0.1 Score=54.27 Aligned_cols=52 Identities=10% Similarity=0.077 Sum_probs=36.8
Q ss_pred CCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 91 DQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 91 D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
+++|+.||+.+|+.. .+...+.+..+...+ .+++.++.|+.++.||.+++++
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tag-glvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAG-NLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECC-CEEEEECCCCcEEEEECCCCcc
Confidence 478999999998731 112223333455554 5778889999999999999954
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=93.99 E-value=1.8 Score=40.12 Aligned_cols=101 Identities=8% Similarity=0.196 Sum_probs=53.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+.++.|+|+|.++|.+...+-.+-+|-. +. ..+.+. .... ..+..+.+.|++ .
T Consensus 164 ~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~--------tW~~~~--~~~~------------~~~~~~~~~~~g---~ 217 (327)
T 2xbg_A 164 VMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QT--------AWEPHN--RTTS------------RRLHNMGFTPDG---R 217 (327)
T ss_dssp CEEEEEECTTSCEEEEETTSSEEEEECTT-CS--------SCEEEE--CCSS------------SCEEEEEECTTS---C
T ss_pred ceEEEEEcCCCcEEEEECCCcEEEEeCCC-CC--------ceeECC--CCCC------------CccceeEECCCC---C
Confidence 46788999999988877544333323321 11 111111 0111 236677777654 5
Q ss_pred EEEeeCCCeEEEEEccCCC----cc-c-c--cccEEEEEEecCCCCEEEEEeCCCeE
Q psy12356 85 FLLSTNDQSFNIVDIKPTN----ME-E-L--NEVITAAEFHPIDCNLFVYSSSKGTI 133 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~----~~-~-~--~~~V~sv~f~p~~~~~las~s~Dg~i 133 (400)
+.+.+.++.+++++.+.|+ .. . . ...+.++.|.|+ +.+++.+ .++.|
T Consensus 218 ~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~-~~~~~~g-~~g~i 272 (327)
T 2xbg_A 218 LWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP-NEVWLAG-GAGAL 272 (327)
T ss_dssp EEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS-SCEEEEE-STTCE
T ss_pred EEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC-CEEEEEe-CCCeE
Confidence 6666667887777433222 11 1 1 124778888875 3555544 45654
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=93.37 E-value=6.1 Score=38.22 Aligned_cols=67 Identities=12% Similarity=0.085 Sum_probs=43.2
Q ss_pred eeEEEEEeccCCceEEEe-eCCCeEEEEEccCCCc-ccc-----cccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 71 INKIRWLRRKNQAHFLLS-TNDQSFNIVDIKPTNM-EEL-----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~s-s~D~tI~lWd~~~~~~-~~~-----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
...+++.|+. +.+..+ ..++.|+.+|.+++.. ... ...-..++|+|++..++++-...+.|+.+|..
T Consensus 230 P~giavd~~~--G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 230 AKTCAVHPQN--GKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp BCCCEECTTT--CCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCEEEEeCCC--CeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 3457777732 244444 4577888888876653 111 11224699999874477777778899998865
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=92.94 E-value=2.1 Score=39.92 Aligned_cols=58 Identities=3% Similarity=0.043 Sum_probs=39.3
Q ss_pred ceEEEeeCCCeEEEEEccCCCcc--cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNME--ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~--~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
+.+.+++.++.+..+|.++|+.. .......++... + ..+..++.++.|..+|..+++.
T Consensus 240 ~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~--~-~~l~~~~~~g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVD--G-NRIYLVDQNDRVMALTIDGGVT 299 (376)
T ss_dssp TEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEE--T-TEEEEEETTCCEEEEETTTCCE
T ss_pred CEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEE--C-CEEEEEcCCCeEEEEECCCCcE
Confidence 36777778899999999888732 111223344443 3 3566677889999999998853
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=92.62 E-value=6.2 Score=36.32 Aligned_cols=27 Identities=11% Similarity=0.140 Sum_probs=22.4
Q ss_pred cCeEEEEECCCCcEEEEecCCeEEEEe
Q psy12356 225 SSISDVKISNSGRYMISRDYLCVKVWD 251 (400)
Q Consensus 225 ~~V~~v~fSpdg~~las~~D~tIklWD 251 (400)
..+..++++|++++++.+.++.+++++
T Consensus 205 ~~~~~~~~~~~g~~~~~~~~G~~~~s~ 231 (327)
T 2xbg_A 205 RRLHNMGFTPDGRLWMIVNGGKIAFSD 231 (327)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE
T ss_pred CccceeEECCCCCEEEEeCCceEEEec
Confidence 467889999999988877788888774
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=91.96 E-value=1.2 Score=43.11 Aligned_cols=68 Identities=12% Similarity=0.061 Sum_probs=44.8
Q ss_pred eeEEEEEeccCCceEEEe-eCCCeEEEEEccCCCccc---c--cccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 71 INKIRWLRRKNQAHFLLS-TNDQSFNIVDIKPTNMEE---L--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~s-s~D~tI~lWd~~~~~~~~---~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
...+++.|+. +.+.++ ..++.|..+|.+++.... . ...-+.++|+|++..++++-...+.|..+|...
T Consensus 228 p~giavdp~~--g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 228 CNGAETHPIN--GELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp CCCEEECTTT--CCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ceEEEEeCCC--CEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 4567888832 245544 457788899987654311 1 123468999998643677777788999988764
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=91.50 E-value=3.2 Score=42.68 Aligned_cols=60 Identities=8% Similarity=0.080 Sum_probs=35.8
Q ss_pred CCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE-EecCCeEEEEeCCCCCCceeeec
Q psy12356 186 RKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI-SRDYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 186 ~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la-s~~D~tIklWD~~~~~~~l~~~~ 263 (400)
.+|.|.-||+++++.. |..+ +..++....+...|.++. ++.|+.++.||.+++. .+..++
T Consensus 436 ~~g~l~A~D~~tG~~~------W~~~-----------~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~-~l~~~~ 496 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAA------WKVP-----------YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE-ALWQFE 496 (668)
T ss_dssp CEEEEEEEETTTTEEE------EEEE-----------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC-EEEEEE
T ss_pred ccceEEEEeCCCCcEE------EEcc-----------CCCCCcCceeEeCCCEEEEECCcccchhhhhhcCh-hheEec
Confidence 4588999999887642 2110 001122223334555555 4568999999999874 566664
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=91.12 E-value=10 Score=35.70 Aligned_cols=30 Identities=20% Similarity=0.347 Sum_probs=23.3
Q ss_pred CeEEEEECCCCcEEE-E-ecCCeEEEEeCCCC
Q psy12356 226 SISDVKISNSGRYMI-S-RDYLCVKVWDLHME 255 (400)
Q Consensus 226 ~V~~v~fSpdg~~la-s-~~D~tIklWD~~~~ 255 (400)
.-+.++|||||++|. + +..+.|..||+...
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~ 253 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHAN 253 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCC
Confidence 457899999998765 3 45689999998743
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=90.87 E-value=5.5 Score=40.66 Aligned_cols=27 Identities=11% Similarity=0.358 Sum_probs=22.2
Q ss_pred EEEECCCCCeEEEecC-CCeEEEEEcCC
Q psy12356 8 ASQRFSDGELLATGDK-GGRVVIFQRDP 34 (400)
Q Consensus 8 ~v~fspdG~~Las~s~-Dg~I~iwd~~~ 34 (400)
++++.++|++++.|+. +.++.+||..+
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t 274 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSS 274 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGG
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcC
Confidence 4678899999999984 56899999765
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=90.01 E-value=13 Score=35.09 Aligned_cols=202 Identities=10% Similarity=0.044 Sum_probs=103.4
Q ss_pred eEEEEEECCCCC-eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGE-LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~-~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+..++|++.++ +..+-...+.|+.++.++.. ...+..... .....+++.+.+. .
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~------------~~~~~~~~~-----------~~p~glavd~~~g-~ 172 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSN------------VEEVVSTGL-----------ESPGGLAVDWVHD-K 172 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCC------------EEEEECSSC-----------SCCCCEEEETTTT-E
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC------------cEEEEeCCC-----------CCccEEEEEeCCC-e
Confidence 356789997554 44454567889889887431 111111100 1134567765432 2
Q ss_pred eEEEeeCCCeEEEEEccCCCcccc----cccEEEEEEecCCCCEEEEEeCC-CeEEEEecccccccccccceeccCcccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEEL----NEVITAAEFHPIDCNLFVYSSSK-GTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~~----~~~V~sv~f~p~~~~~las~s~D-g~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
.+++-...+.|.+.+++......+ ...-++++++|.++.++.+-... +.|...++...... .+.......
T Consensus 173 lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-----~~~~~~~~~ 247 (386)
T 3v65_B 173 LYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-----IIADTHLFW 247 (386)
T ss_dssp EEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-----EEECSSCSC
T ss_pred EEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE-----EEEECCCCC
Confidence 333445567888888765432111 13457899999877777766555 78888887654210 010000001
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
..++.+. ...+....+....+.|..+|+.... .+.+. ......-..|++ .++.+
T Consensus 248 PnGlavd---------~~~~~lY~aD~~~~~I~~~d~dG~~-----~~~~~-----------~~~~~~P~giav-~~~~l 301 (386)
T 3v65_B 248 PNGLTID---------YAGRRMYWVDAKHHVIERANLDGSH-----RKAVI-----------SQGLPHPFAITV-FEDSL 301 (386)
T ss_dssp EEEEEEE---------GGGTEEEEEETTTTEEEEECTTSCS-----CEEEE-----------CSSCSSEEEEEE-ETTEE
T ss_pred eeeEEEe---------CCCCEEEEEECCCCEEEEEeCCCCe-----eEEEE-----------ECCCCCceEEEE-ECCEE
Confidence 1122222 0123333344456788888875321 01111 011123456777 34455
Q ss_pred EEE-ecCCeEEEEeCCCCCCceeee
Q psy12356 239 MIS-RDYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 239 las-~~D~tIklWD~~~~~~~l~~~ 262 (400)
..+ ...+.|...|..++. .++.+
T Consensus 302 y~td~~~~~V~~~~~~~G~-~~~~i 325 (386)
T 3v65_B 302 YWTDWHTKSINSANKFTGK-NQEII 325 (386)
T ss_dssp EEEETTTTEEEEEETTTCC-SCEEE
T ss_pred EEeeCCCCeEEEEECCCCc-ceEEE
Confidence 555 356888888865553 34444
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=88.81 E-value=15 Score=34.13 Aligned_cols=153 Identities=12% Similarity=0.112 Sum_probs=85.0
Q ss_pred eeEEEEEeccCCceEEEe-eCCCeEEEEEccCCCcccc----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc
Q psy12356 71 INKIRWLRRKNQAHFLLS-TNDQSFNIVDIKPTNMEEL----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD 145 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~s-s~D~tI~lWd~~~~~~~~~----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~ 145 (400)
+..++|.+... .+..+ ...+.|..++++++..... .....++++++.+++++.+-...+.|.+.++......
T Consensus 75 ~~~l~~d~~~~--~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~- 151 (349)
T 3v64_C 75 AIALDFHHRRE--LVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK- 151 (349)
T ss_dssp EEEEEEETTTT--EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-
T ss_pred eEEEEEecccc--EEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE-
Confidence 67789987542 45544 4678899999876653221 1234678999877777788777889999998754210
Q ss_pred cccceeccCcccceeceeccCchhhhhhcccCcceeecCCCC-CeEEEeecccccccCcccccccCCCCCCCcccccccc
Q psy12356 146 RHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRK-PAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEII 224 (400)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-g~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 224 (400)
.+.........++.+. ...+....+.... +.|...|+..... ..+. ....
T Consensus 152 ----~l~~~~l~~P~~iavd---------p~~g~ly~td~~~~~~I~r~~~dG~~~-----~~~~-----------~~~~ 202 (349)
T 3v64_C 152 ----VLLWQSLEKPRAIALH---------PMEGTIYWTDWGNTPRIEASSMDGSGR-----RIIA-----------DTHL 202 (349)
T ss_dssp ----EEECTTCSCEEEEEEE---------TTTTEEEEEECSSSCEEEEEETTSCSC-----EESC-----------CSSC
T ss_pred ----EEEeCCCCCcceEEEe---------cCcCeEEEeccCCCCEEEEEeCCCCCc-----EEEE-----------ECCC
Confidence 0100000011122221 1123333333333 6677776653210 1110 0112
Q ss_pred cCeEEEEECCCCcEEE-E-ecCCeEEEEeCCCC
Q psy12356 225 SSISDVKISNSGRYMI-S-RDYLCVKVWDLHME 255 (400)
Q Consensus 225 ~~V~~v~fSpdg~~la-s-~~D~tIklWD~~~~ 255 (400)
..-+.|+|+|++..|. + +..+.|..+|+...
T Consensus 203 ~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 203 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 3467899998766554 4 34688999998753
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=88.50 E-value=9.6 Score=35.89 Aligned_cols=114 Identities=13% Similarity=0.167 Sum_probs=66.1
Q ss_pred EEEEEECC--CCC-eEEEe-c--CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 6 REASQRFS--DGE-LLATG-D--KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 6 v~~v~fsp--dG~-~Las~-s--~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
...+.+.+ ||. +|..+ . .+.+|.||+++... +....+.++.+. +. ...+++...++
T Consensus 114 PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~-------~~~~~~~~~~g~-~~----------~~pND~~v~~~ 175 (355)
T 3sre_A 114 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEE-------KSLLHLKTIRHK-LL----------PSVNDIVAVGP 175 (355)
T ss_dssp EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTT-------TEEEEEEEECCT-TC----------SSEEEEEEEET
T ss_pred eeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCC-------CEEEEEeccccC-CC----------CCCceEEEeCC
Confidence 44555544 454 34333 2 25688888876532 122334444432 11 34788999887
Q ss_pred cCCceEEEeeC----C------------CeEEEEEccCCCccccc---ccEEEEEEecCCCCEEEEEeCCCeEEEEeccc
Q psy12356 80 KNQAHFLLSTN----D------------QSFNIVDIKPTNMEELN---EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 80 ~~~~~~l~ss~----D------------~tI~lWd~~~~~~~~~~---~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~ 140 (400)
+ .+.++.. | ..=+||.++.++++... ..-+.++|+||+..++++-+..+.|..+|+..
T Consensus 176 G---~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 176 E---HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp T---EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred C---CEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 6 4444321 2 23466666555533222 23589999999766667767788999999864
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=86.54 E-value=8.7 Score=37.24 Aligned_cols=68 Identities=18% Similarity=0.173 Sum_probs=49.6
Q ss_pred eeEEEEEeccCCceEEEeeCCCeEEEEEccCCC-c-c-------------c-------ccccEEEEEEecCCCC--EEEE
Q psy12356 71 INKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN-M-E-------------E-------LNEVITAAEFHPIDCN--LFVY 126 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~-~-~-------------~-------~~~~V~sv~f~p~~~~--~las 126 (400)
|..+..+|.| .+++-.++.+|.|-.+..+. . . . ....|..+-|||-+.+ .|+.
T Consensus 68 i~qlvlSpsG---~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 68 TFHVISSTSG---DLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TCEEEECTTS---SEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred eeEEEECCCC---CEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 5668888876 56665667899998886332 0 0 0 1245899999998643 7888
Q ss_pred EeCCCeEEEEecccc
Q psy12356 127 SSSKGTIRLCDMRAA 141 (400)
Q Consensus 127 ~s~Dg~i~lWD~~~~ 141 (400)
=-.|++||+||+...
T Consensus 145 LtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 145 LKEDDTITMFDILNS 159 (452)
T ss_dssp EETTSCEEEEETTCT
T ss_pred EecCCEEEEEEcccC
Confidence 889999999999873
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=86.04 E-value=3.8 Score=41.89 Aligned_cols=110 Identities=6% Similarity=-0.037 Sum_probs=63.9
Q ss_pred EEEECC-CCCeEEEecCCC-----------eEEEEEcCCCCccccCCCCcceeeeeee-ccCcchhhcccccccceeeEE
Q psy12356 8 ASQRFS-DGELLATGDKGG-----------RVVIFQRDPLSKTSIPKRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKI 74 (400)
Q Consensus 8 ~v~fsp-dG~~Las~s~Dg-----------~I~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~v 74 (400)
.+++.| +|++++.|+.+. .+.+||..+.+ ...+..+. .+. .....+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~---------w~~~~~~~~~~~------------~~~~~~ 248 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI---------VSDRTVTVTKHD------------MFCPGI 248 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC---------BCCCEEEECSCC------------CSSCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc---------EEeCcccCCCCC------------Cccccc
Confidence 567777 999999887543 58889987542 11111111 111 001234
Q ss_pred EEEeccCCceEEEee-CCCeEEEEEccCCCccc---cc--ccEEEEEEecCCCCEEEEEe-CC-----CeEEEEecccc
Q psy12356 75 RWLRRKNQAHFLLST-NDQSFNIVDIKPTNMEE---LN--EVITAAEFHPIDCNLFVYSS-SK-----GTIRLCDMRAA 141 (400)
Q Consensus 75 ~~sp~~~~~~~l~ss-~D~tI~lWd~~~~~~~~---~~--~~V~sv~f~p~~~~~las~s-~D-----g~i~lWD~~~~ 141 (400)
++.+++. .++.++ .+.++.+||..+++... +. ..-.++++.+++ ++++.|+ .+ ..+.+||..++
T Consensus 249 ~~~~~g~--lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 249 SMDGNGQ--IVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EECTTSC--EEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cCCCCCC--EEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCC-eEEEEeCcccCCcccccceEeCCCCC
Confidence 5555542 455565 46689999998765211 11 111234455654 7888888 34 57899998876
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=85.70 E-value=24 Score=33.21 Aligned_cols=57 Identities=19% Similarity=0.127 Sum_probs=39.1
Q ss_pred EEEeeCCCeEEEEEccCCCcccc---cccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEEL---NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~~---~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
++.-+....|+..+++++..... .....+++|++.++.++.+-...+.|+.+++...
T Consensus 89 ~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 89 VLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 148 (386)
T ss_dssp EEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred eeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 33333446788888876653211 2346789999876667777677889999998765
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=84.77 E-value=9 Score=35.84 Aligned_cols=54 Identities=13% Similarity=0.249 Sum_probs=35.9
Q ss_pred eeEEEEEeccCCceEEEeeCCCeEEEEEccCCC--cccc------cccEEEEEEecC---CCCEEEEEe
Q psy12356 71 INKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN--MEEL------NEVITAAEFHPI---DCNLFVYSS 128 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~--~~~~------~~~V~sv~f~p~---~~~~las~s 128 (400)
...++|.|++ .++++..++.|+++|. ++. +... ......++|+|+ ++.++++-+
T Consensus 31 P~~ia~~pdG---~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 31 PWSIAPLGGG---RYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp EEEEEEEETT---EEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CeEEEEcCCC---eEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 5689999986 6777777799998873 333 1100 134678999997 456666554
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=84.40 E-value=26 Score=32.46 Aligned_cols=201 Identities=10% Similarity=0.054 Sum_probs=103.6
Q ss_pred EEEEEECCCCCeE-EEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGELL-ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~~L-as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+..++|++.++.| .+-...+.|+.++.++.. . ..+..... .....+++.+.+. ..
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~---------~---~~~~~~~~-----------~~p~glavd~~~g-~l 130 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSN---------V---EEVVSTGL-----------ESPGGLAVDWVHD-KL 130 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCS---------C---EEEECSSC-----------SCCCEEEEETTTT-EE
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCC---------c---eEEEeCCC-----------CCccEEEEecCCC-eE
Confidence 5688998755544 444567889888887532 0 11111100 1234577765432 23
Q ss_pred EEEeeCCCeEEEEEccCCCcccc----cccEEEEEEecCCCCEEEEEeCC-CeEEEEecccccccccccceeccCcccce
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEEL----NEVITAAEFHPIDCNLFVYSSSK-GTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~~----~~~V~sv~f~p~~~~~las~s~D-g~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
+.+-...+.|.+.+++....... ...-++++++|.++.++.+-... +.|...++...... .+........
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-----~~~~~~~~~P 205 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-----IIADTHLFWP 205 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-----ESCCSSCSCE
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-----EEEECCCCCc
Confidence 34445577888888875442111 13457899999777777776666 78888887654210 0000000011
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
.++.+. ...+....+....+.|..+|+.... .+.+. ......-..+++ .++.+.
T Consensus 206 nGla~d---------~~~~~lY~aD~~~~~I~~~~~dG~~-----~~~~~-----------~~~~~~P~giav-~~~~ly 259 (349)
T 3v64_C 206 NGLTID---------YAGRRMYWVDAKHHVIERANLDGSH-----RKAVI-----------SQGLPHPFAITV-FEDSLY 259 (349)
T ss_dssp EEEEEE---------TTTTEEEEEETTTTEEEEEETTSCS-----CEEEE-----------CSSCSSEEEEEE-ETTEEE
T ss_pred ceEEEe---------CCCCEEEEEECCCCEEEEEeCCCCc-----eEEEE-----------eCCCCCceEEEE-ECCEEE
Confidence 122221 1233333344456788888875321 01111 011123456777 345555
Q ss_pred EEe-cCCeEEEEeCCCCCCceeee
Q psy12356 240 ISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 240 as~-~D~tIklWD~~~~~~~l~~~ 262 (400)
.+. ..+.|...|..++. .++.+
T Consensus 260 ~td~~~~~V~~~~~~~G~-~~~~i 282 (349)
T 3v64_C 260 WTDWHTKSINSANKFTGK-NQEII 282 (349)
T ss_dssp EEETTTTEEEEEETTTCC-SCEEE
T ss_pred EecCCCCeEEEEEccCCC-ccEEe
Confidence 553 56788888855553 23444
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=83.41 E-value=26 Score=31.78 Aligned_cols=112 Identities=10% Similarity=0.021 Sum_probs=67.2
Q ss_pred eEEEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+..+++++. |++.++-..++.|.+.+.+... .+++.... -.....++..|.+.
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~------------~~~~~~~~-----------~~~P~~iavdp~~g-- 132 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK------------RKTLFREN-----------GSKPRAIVVDPVHG-- 132 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSS------------EEEEEECT-----------TCCEEEEEEETTTT--
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc------------eEEEEECC-----------CCCcceEEeCCCCC--
Confidence 3567888864 4455555667889998876321 11221100 02356788887542
Q ss_pred eEEEee-CC-CeEEEEEccCCCcccc----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLST-ND-QSFNIVDIKPTNMEEL----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss-~D-~tI~lWd~~~~~~~~~----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+..+. .. +.|...+++....+.. -..-++++++|+++.++.+-+..+.|...|+...
T Consensus 133 ~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 133 FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp EEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 444443 22 6777777754332211 1245789999987667777667789999998753
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=83.17 E-value=45 Score=34.39 Aligned_cols=204 Identities=12% Similarity=0.125 Sum_probs=103.5
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|.++...++|.+-+ |..++-|..++..... ++ .+. +.+.......+ ....|.++...+++ .
T Consensus 314 ~v~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~---------~~---~~~-~~~~~~~~~~l-~~~~v~~i~~d~~g---~ 375 (781)
T 3v9f_A 314 SARYIFQDSFNNIWI-GTWGGGINFISNAPPT---------FH---TWS-YSPTQMNESSL-SNKVVSSVCDDGQG---K 375 (781)
T ss_dssp CEEEEEECSSCCEEE-EEBSSCEEEECSSCCS---------CE---EEC-----CCCSSCC-SSSCEEEEEECTTS---C
T ss_pred eEEEEEEeCCCCEEE-EecCCeEEEeCCCCCc---------ce---eec-cCccccccCCC-CCcceEEEEEcCCC---C
Confidence 478888888887444 5556668888865421 11 111 10000000000 01236677654433 5
Q ss_pred EEEeeCCCeEEEEEccCCCccc-------ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEE-------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~-------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
+-+++.++-+..+|..++.+.. ....|.++...+++ ++.+ |..++-|..+|..++....- .. ..+...
T Consensus 376 lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWi-gt~~~Gl~~~~~~~~~~~~~-~~--~~~~~~ 450 (781)
T 3v9f_A 376 LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEG-NLWF-GTYLGNISYYNTRLKKFQII-EL--EKNELL 450 (781)
T ss_dssp EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTS-CEEE-EETTEEEEEECSSSCEEEEC-CS--TTTCCC
T ss_pred EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCC-CEEE-EeccCCEEEEcCCCCcEEEe-cc--CCCCCC
Confidence 6677766667888876554321 12468888888764 5544 55666788888876632110 00 001111
Q ss_pred ceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCC
Q psy12356 158 NCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSG 236 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg 236 (400)
.+..+.. -+++. .+++ . +.+..+|..++.. ..+...... . .....|.++...++|
T Consensus 451 ~v~~i~~----------d~~g~lwigt--~-~Gl~~~~~~~~~~-----~~~~~~~~~---~---~~~~~i~~i~~d~~g 506 (781)
T 3v9f_A 451 DVRVFYE----------DKNKKIWIGT--H-AGVFVIDLASKKV-----IHHYDTSNS---Q---LLENFVRSIAQDSEG 506 (781)
T ss_dssp CEEEEEE----------CTTSEEEEEE--T-TEEEEEESSSSSC-----CEEECTTTS---S---CSCSCEEEEEECTTC
T ss_pred eEEEEEE----------CCCCCEEEEE--C-CceEEEeCCCCeE-----EecccCccc---c---cccceeEEEEEcCCC
Confidence 1111111 12222 2333 2 4577777665321 111100000 0 012578999999999
Q ss_pred cEEEEecCCeEEEEeCCCC
Q psy12356 237 RYMISRDYLCVKVWDLHME 255 (400)
Q Consensus 237 ~~las~~D~tIklWD~~~~ 255 (400)
++.+++.++-+..+|..++
T Consensus 507 ~lWigt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 507 RFWIGTFGGGVGIYTPDMQ 525 (781)
T ss_dssp CEEEEESSSCEEEECTTCC
T ss_pred CEEEEEcCCCEEEEeCCCC
Confidence 9988775444666887653
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=83.16 E-value=6.3 Score=39.76 Aligned_cols=52 Identities=13% Similarity=0.117 Sum_probs=33.3
Q ss_pred CCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 91 DQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 91 D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
++.|.-||+.+|+.. .....+.+......+ .++..++.|+.++.+|.+++++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tag-glvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAG-NLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETT-TEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCC-CEEEEECCCCcEEEEECCCCCE
Confidence 688999999988731 111111111111223 4667788999999999999954
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=82.92 E-value=19 Score=36.20 Aligned_cols=19 Identities=16% Similarity=0.139 Sum_probs=15.4
Q ss_pred EEEeeCCCeEEEEEccCCC
Q psy12356 85 FLLSTNDQSFNIVDIKPTN 103 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~ 103 (400)
++.++.++.+.++|.++|+
T Consensus 339 v~~~~~~G~l~~lD~~tG~ 357 (582)
T 1flg_A 339 TAHADRNGFFYVVDRSNGK 357 (582)
T ss_dssp EEEECTTSEEEEEETTTCC
T ss_pred EEEECCCceEEEEECCCCC
Confidence 4456789999999998876
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=81.70 E-value=5.5 Score=40.89 Aligned_cols=53 Identities=8% Similarity=0.043 Sum_probs=35.9
Q ss_pred CCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 90 NDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 90 ~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
.++.|..||+.+|+.. ..........+...+ .+++.++.|+.++.||.++++.
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~g-g~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAG-NLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE
T ss_pred ccceEEEEeCCCCcEEEEccCCCCCcCceeEeCC-CEEEEECCcccchhhhhhcChh
Confidence 3588999999998731 111222223334444 5777788999999999999854
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=81.59 E-value=35 Score=32.00 Aligned_cols=101 Identities=11% Similarity=0.253 Sum_probs=56.0
Q ss_pred CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec----cCCceEEEee
Q psy12356 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR----KNQAHFLLST 89 (400)
Q Consensus 14 dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~----~~~~~~l~ss 89 (400)
...+++.-...+-+.|||++. +.++.+.. ..++.|..-|. +..--++.++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G------------~~l~~~~~--------------g~~nnVD~r~~~~l~g~~~dla~as 92 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDG------------KMLHSYNT--------------GKLNNVDIRYDFPLNGKKVDIAAAS 92 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTS------------CEEEEECC--------------SCEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CccEEEEEcCCCCEEEEcCCC------------cEEEEccC--------------CCcccEEEecccccCCceEeEEEEe
Confidence 344555556678899999953 22333321 12455554442 1100134333
Q ss_pred --C--CCeEEEEEcc--CCCccccc----------ccEEEEEE--ecCCCC-EEEEEeCCCeEEEEeccc
Q psy12356 90 --N--DQSFNIVDIK--PTNMEELN----------EVITAAEF--HPIDCN-LFVYSSSKGTIRLCDMRA 140 (400)
Q Consensus 90 --~--D~tI~lWd~~--~~~~~~~~----------~~V~sv~f--~p~~~~-~las~s~Dg~i~lWD~~~ 140 (400)
. +++|++++++ ++.+.... ..+..+++ +|.++. ++.....+|.+..|++..
T Consensus 93 ~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~ 162 (355)
T 3amr_A 93 NRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKA 162 (355)
T ss_dssp ECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEE
T ss_pred CCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEe
Confidence 3 5899999774 44432221 23456777 775544 344455689999999853
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=81.29 E-value=13 Score=36.10 Aligned_cols=55 Identities=11% Similarity=0.263 Sum_probs=34.8
Q ss_pred eeEEEEEeccCCceEEEeeCCC-eEEEEEccCCCccc---c---------cccEEEEEEecC---CCCEEEEEe
Q psy12356 71 INKIRWLRRKNQAHFLLSTNDQ-SFNIVDIKPTNMEE---L---------NEVITAAEFHPI---DCNLFVYSS 128 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~D~-tI~lWd~~~~~~~~---~---------~~~V~sv~f~p~---~~~~las~s 128 (400)
...++|.|++ .++++...+ .|++++..++.... . ......|+|+|+ ++.++++-+
T Consensus 29 P~~~a~~pdG---~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 29 PHALLWGPDN---QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp EEEEEECTTS---CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred ceEEEEcCCC---cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 5689999886 577766554 68888765554211 1 123568999995 445555554
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=80.72 E-value=11 Score=33.17 Aligned_cols=104 Identities=7% Similarity=0.035 Sum_probs=54.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+..++|+|||.+-|. .+|.+.-.+..+.+. . .+.+-... +-..+- ....++.|.|++. .
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~---------~---~W~~s~t~---IG~~Gw-~~F~a~~fD~~G~--L 101 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDN---------D---NWMGRAKK---IGNGGW-NQFQFLFFDPNGY--L 101 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTT---------C---CHHHHCEE---EECSCG-GGCSEEEECTTSC--E
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCc---------c---cccccccE---eccccc-ccceEEEECCCCC--E
Confidence 3568999999998887 566644333322110 0 11110000 000000 0125677877763 4
Q ss_pred EEEeeCCCeEEEEEccCCCcccc-----------cccEEEEEEecCCCCEEEEEeCCCeE
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEEL-----------NEVITAAEFHPIDCNLFVYSSSKGTI 133 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~~-----------~~~V~sv~f~p~~~~~las~s~Dg~i 133 (400)
+++ .|+.|.=|+-.+.....+ -..+..|.|.|+| .+.|.. |+.+
T Consensus 102 Yav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg~l 156 (236)
T 1tl2_A 102 YAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQQF 156 (236)
T ss_dssp EEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTS-CEEEEE--TTEE
T ss_pred EEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCc-eEEEEe--CCcE
Confidence 444 668887666533221111 1357899999985 666655 7764
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=80.11 E-value=7.5 Score=40.17 Aligned_cols=116 Identities=8% Similarity=-0.003 Sum_probs=61.1
Q ss_pred EEEEEECCCCCeEEEe-cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGELLATG-DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~~Las~-s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+..|+|+++++.|..+ ...+.|+.+++.+... +. .....+.. . + ..+..|++.+.+. ..
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~------~~-~~~~~i~~-~--------~---~~P~glavD~~~g-~L 467 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------VS-SYDTVISR-D--------I---QAPDGLAVDWIHS-NI 467 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------C-CCCCBCCS-C--------C-----CCCEECCCSSS-BC
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCC------Cc-ceEEEEeC-C--------C---CCcceEEEEeeCC-cE
Confidence 4578898866655544 4567899988864100 00 00000100 0 0 1133455554331 23
Q ss_pred EEEeeCCCeEEEEEccCCCcccc----cccEEEEEEecCCCCEEEEEeCC-CeEEEEecccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEEL----NEVITAAEFHPIDCNLFVYSSSK-GTIRLCDMRAA 141 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~~----~~~V~sv~f~p~~~~~las~s~D-g~i~lWD~~~~ 141 (400)
+++-...+.|.+.+++......+ ......++++|.++.++++-... +.|...++...
T Consensus 468 Y~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 468 YWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp EECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred EEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 34435577888888876542211 12346788999766666654333 67777776543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 400 | |||
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.97 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.97 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.97 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.97 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.95 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.95 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.95 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.95 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.95 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.94 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.94 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.94 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.94 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.94 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.94 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.93 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.92 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.92 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.92 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.91 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.9 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.87 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.87 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.86 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.86 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.81 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.8 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.8 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.8 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.79 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.78 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.73 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.71 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.66 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.58 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.57 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.56 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.51 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.5 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.34 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.32 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.31 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.26 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.16 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.04 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.74 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.71 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.58 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.54 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.46 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.43 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.37 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.36 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.11 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.08 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.04 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.99 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 97.84 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.69 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.68 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 97.48 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.47 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 97.45 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 97.16 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.64 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 96.02 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 93.75 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 90.93 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 84.54 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 80.58 |
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.9e-34 Score=275.22 Aligned_cols=322 Identities=12% Similarity=0.078 Sum_probs=207.0
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
-.|+|++|||||++||+|+.||.|+|||.+++ ....+..|++|.. .|++|+|+|+++
T Consensus 8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~---------~~~~~~~l~gH~~------------~V~~l~fsp~~~-- 64 (371)
T d1k8kc_ 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGN---------KWVQVHELKEHNG------------QVTGVDWAPDSN-- 64 (371)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETT---------EEEEEEEEECCSS------------CEEEEEEETTTT--
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEECCCC---------CEEEEEEecCCCC------------CEEEEEECCCCC--
Confidence 35899999999999999999999999998753 3345678889974 499999999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
.+++++.|++|+|||++++.. ..+...|++++|+|++ +.|++++.|++|++|++................ ..
T Consensus 65 ~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~-~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~-~~ 142 (371)
T d1k8kc_ 65 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPI-RS 142 (371)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTC-CS
T ss_pred EEEEEECCCeEEEEeeccccccccccccccccccccccccccc-ccceeecccCcceeeeeeccccccccccccccc-cc
Confidence 777889999999999987652 3456789999999985 789999999999999988763211000000000 01
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCC--CcccccccccCeEEEEECCC
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT--NKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~V~~v~fSpd 235 (400)
.+..+ ...|++...++++.|++|++||+..................+. ......+|...|.+++|+|+
T Consensus 143 ~v~~v----------~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 212 (371)
T d1k8kc_ 143 TVLSL----------DWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN 212 (371)
T ss_dssp CEEEE----------EECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS
T ss_pred ccccc----------cccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecc
Confidence 11112 2346666677778899999999876543221111100000000 01113467889999999999
Q ss_pred CcEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCcccCCCCCceeecCcccccceee--ccCccceeccc
Q psy12356 236 GRYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLRDPSNITALRVPQIKPIELTV--EASPRRIFANA 305 (400)
Q Consensus 236 g~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~~~~~~~~i~l~~~~~~~~~~--~~~~~~~~~~~ 305 (400)
|++|++ +.|++|++||+.++ .++..+.+|. +.++|++++.+.++.+++|.+....... .+...
T Consensus 213 g~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~~~~~~~~~~~~~------ 285 (371)
T d1k8kc_ 213 GSRVAWVSHDSTVCLADADKK-MAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLD------ 285 (371)
T ss_dssp SSEEEEEETTTEEEEEEGGGT-TEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCC------
T ss_pred cccccccccCCcceEEeeecc-cceeeeecccccceeeeecCCCCEEEEEcCCceEEEEeeCCCceEEEeeeec------
Confidence 999997 46899999999986 4678888774 4567777665556666666543221111 00000
Q ss_pred cccceEEEEEcC-------CCcEE-ee--cccchhhcccccceeEEEEccCCC----EEEEe-cCCeEEEEeCccCC
Q psy12356 306 HTYHINSISVNS-------DQLTV-EA--SPRGIFADAHTYHISSTSVNSDQE----TYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 306 ~~~~i~~i~~s~-------dg~~~-~~--~~~~~~~~gh~~~V~~i~fspDg~----~las~-~D~~i~lW~~~~~~ 367 (400)
..........+. |.+.. .. .........|.+.|++|++.|++. .|+|+ .|++|+|||++..+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~ 362 (371)
T d1k8kc_ 286 VPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362 (371)
T ss_dssp CC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred CccccccccccceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCcCh
Confidence 000000000000 00000 00 000011236999999999988763 58886 69999999997644
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-33 Score=267.50 Aligned_cols=263 Identities=13% Similarity=0.151 Sum_probs=184.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+|+|||||++||||+ ||.|+|||+....... .. ......+|+ +.|.+|+|+|+++
T Consensus 52 ~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~-----~~-~~~~~~~h~------------~~I~~v~~s~dg~-- 110 (337)
T d1gxra_ 52 EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS-----PV-SQLDCLNRD------------NYIRSCKLLPDGC-- 110 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS-----CS-EEEECSCTT------------SBEEEEEECTTSS--
T ss_pred CcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccc-----ee-EEeeecCCC------------CcEEEEEEcCCCC--
Confidence 5689999999999999998 8999999997643110 00 111233454 4599999999874
Q ss_pred eEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
.+++++.|++|+|||+.... +..+...|..++|+|++ .++++++.|+.|++||++++.+...... . ..
T Consensus 111 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~~~~~~~~~~~~~~----~-~~ 184 (337)
T d1gxra_ 111 TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQG----H-TD 184 (337)
T ss_dssp EEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECC----C-SS
T ss_pred EEEEeeccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc----c-cc
Confidence 67788999999999987543 23456779999999985 7899999999999999998854221100 0 01
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
.+..+.+ .+++...+.++.|+.+++||++++... +. ..|...|.+++|+|+++
T Consensus 185 ~v~~l~~----------s~~~~~~~~~~~d~~v~i~d~~~~~~~----~~-------------~~~~~~i~~l~~~~~~~ 237 (337)
T d1gxra_ 185 GASCIDI----------SNDGTKLWTGGLDNTVRSWDLREGRQL----QQ-------------HDFTSQIFSLGYCPTGE 237 (337)
T ss_dssp CEEEEEE----------CTTSSEEEEEETTSEEEEEETTTTEEE----EE-------------EECSSCEEEEEECTTSS
T ss_pred ccccccc----------cccccccccccccccccccccccceee----cc-------------cccccceEEEEEccccc
Confidence 1112222 244444555668999999999876532 11 14567899999999999
Q ss_pred EEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEc
Q psy12356 238 YMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVN 316 (400)
Q Consensus 238 ~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s 316 (400)
+|++ +.|+.|++||++++. . .....| ...|++++|+
T Consensus 238 ~l~~~~~d~~i~i~d~~~~~-~-~~~~~~-----------------------------------------~~~i~~v~~s 274 (337)
T d1gxra_ 238 WLAVGMESSNVEVLHVNKPD-K-YQLHLH-----------------------------------------ESCVLSLKFA 274 (337)
T ss_dssp EEEEEETTSCEEEEETTSSC-E-EEECCC-----------------------------------------SSCEEEEEEC
T ss_pred ccceeccccccccccccccc-c-cccccc-----------------------------------------ccccceEEEC
Confidence 9986 478999999998753 2 223233 2334445555
Q ss_pred CCCcEEeeccc----c---------hhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 317 SDQLTVEASPR----G---------IFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 317 ~dg~~~~~~~~----~---------~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
|||+++++.+. + +...+|...|.+++|||||++||++ .|++|+|||+
T Consensus 275 ~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 275 YCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCEEEEccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 55554443211 0 1123688899999999999999997 7999999996
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4e-33 Score=267.59 Aligned_cols=292 Identities=15% Similarity=0.198 Sum_probs=193.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchh------hcccccccceeeEEEEE
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFD------YLKSLEIEEKINKIRWL 77 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~------~~~~~~~~~~V~~v~~s 77 (400)
..|+||+|||||++||+|+ |++|+|||+.+++ .+..+..|..... ......+...|.+|+|+
T Consensus 63 ~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s 130 (388)
T d1erja_ 63 SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGS-----------LVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS 130 (388)
T ss_dssp SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCC-----------EEEEECC-----------------CCCCBEEEEEEC
T ss_pred CcEEEEEECCCCCEEEEEe-CCeEEEEEecccc-----------eEeeecccccccccccccccccccCCCCCEEEEEEC
Confidence 4689999999999999997 8999999998653 2334444432211 11122344669999999
Q ss_pred eccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceecc
Q psy12356 78 RRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIE 153 (400)
Q Consensus 78 p~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~ 153 (400)
|+++ .+++++.|++|++||...++ ...|...|.+++|++++ ..+++++.++.+++||.++........
T Consensus 131 ~~~~--~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~----- 202 (388)
T d1erja_ 131 PDGK--FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTLS----- 202 (388)
T ss_dssp TTSS--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE-----
T ss_pred CCCC--cceeccccccccccccccccccccccccccccccccccccc-ccccccccceeeeeeeccccccccccc-----
Confidence 9874 67788999999999998876 24567889999999974 788999999999999998874321100
Q ss_pred CcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEEC
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKIS 233 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fS 233 (400)
... ...... ....++...++++.||.|++||++++.... .+..+ .....+|.+.|.+++|+
T Consensus 203 ~~~-~~~~~~---------~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~----~~~~~-----~~~~~~h~~~v~~l~~s 263 (388)
T d1erja_ 203 IED-GVTTVA---------VSPGDGKYIAAGSLDRAVRVWDSETGFLVE----RLDSE-----NESGTGHKDSVYSVVFT 263 (388)
T ss_dssp CSS-CEEEEE---------ECSTTCCEEEEEETTSCEEEEETTTCCEEE----EEC-----------CCCSSCEEEEEEC
T ss_pred ccc-cccccc---------ccCCCCCeEEEEcCCCeEEEeecccCccce----eeccc-----cccccCCCCCEEEEEEC
Confidence 000 000011 112344455666789999999998765421 11111 11134788899999999
Q ss_pred CCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEE
Q psy12356 234 NSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINS 312 (400)
Q Consensus 234 pdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 312 (400)
|+|++|+++ .|++|++||++++.. ...+.... ..... . ....|...|.+
T Consensus 264 ~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~-----------~~~~~-----------------~-~~~~~~~~v~~ 313 (388)
T d1erja_ 264 RDGQSVVSGSLDRSVKLWNLQNANN-KSDSKTPN-----------SGTCE-----------------V-TYIGHKDFVLS 313 (388)
T ss_dssp TTSSEEEEEETTSEEEEEEC---------------------------CEE-----------------E-EEECCSSCEEE
T ss_pred CCCCEEEEEECCCcEEEEeccCCcc-cccccccc-----------cccee-----------------e-ecccccceEEE
Confidence 999999974 689999999997642 22211100 00000 0 12357788999
Q ss_pred EEEcCCCcEEeeccc----chh----------hcccccceeEEE------EccCCCEEEEe-cCCeEEEEeCc
Q psy12356 313 ISVNSDQLTVEASPR----GIF----------ADAHTYHISSTS------VNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 313 i~~s~dg~~~~~~~~----~~~----------~~gh~~~V~~i~------fspDg~~las~-~D~~i~lW~~~ 364 (400)
++|+|||++|++++. ++| ..||.+.|.+++ |+|||++|||+ .|++|+||+++
T Consensus 314 ~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 314 VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 999999998875432 111 158999999987 57899999997 69999999975
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2e-31 Score=245.29 Aligned_cols=266 Identities=11% Similarity=0.162 Sum_probs=191.5
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+.|++|+|+|+|++||||+.||+|+|||+.++ +.++++.+|.. .|.+++|+|++.
T Consensus 18 ~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~-----------~~~~~~~~h~~------------~V~~~~~~~~~~-- 72 (317)
T d1vyhc1 18 SPVTRVIFHPVFSVMVSASEDATIKVWDYETG-----------DFERTLKGHTD------------SVQDISFDHSGK-- 72 (317)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTC-----------CCCEEECCCSS------------CEEEEEECTTSS--
T ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------CEEEEEeCCCC------------cEEEEeeecccc--
Confidence 46999999999999999999999999999864 24567888873 499999999864
Q ss_pred eEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.++++.+|+..... ...+...+.++.|+|++ +.+++++.|+.+++||++++........+ ....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~ 146 (317)
T d1vyhc1 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGH-----REWV 146 (317)
T ss_dssp EEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECC-----SSCE
T ss_pred cccccccccccccccccccccccccccccccceeeeccCCC-ceEEeeccCcceeEeecccceeeeEEccC-----CCcc
Confidence 56667889999999987665 23456778999999985 78999999999999999988432211100 0011
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc--
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR-- 237 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~-- 237 (400)
.. +...+++...++++.|+.|++||++..... .. +.+|...+.+++|+|++.
T Consensus 147 ~~----------~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~----~~------------~~~~~~~i~~~~~~~~~~~~ 200 (317)
T d1vyhc1 147 RM----------VRPNQDGTLIASCSNDQTVRVWVVATKECK----AE------------LREHRHVVECISWAPESSYS 200 (317)
T ss_dssp EE----------EEECTTSSEEEEEETTSCEEEEETTTCCEE----EE------------ECCCSSCEEEEEECCSCGGG
T ss_pred ee----------eecccCCCEEEEEeCCCeEEEEeeccceee----EE------------EecCCCCceEEEEeeccccc
Confidence 11 122355556666778999999999875432 11 234556777788877654
Q ss_pred ------------------EEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCccccc
Q psy12356 238 ------------------YMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQIKPI 290 (400)
Q Consensus 238 ------------------~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~~~~~ 290 (400)
++++ +.|++|++||++++ .++.++.+|. +.++|+++ +++.+++|++|++...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 279 (317)
T d1vyhc1 201 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 279 (317)
T ss_dssp GGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS
T ss_pred eeeccccceeeeeccCCceeEeccCCCEEEEEECCCC-cEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCC
Confidence 4554 56899999999986 4677787774 23555543 3455566666654211
Q ss_pred ceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 291 ELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
+. + ..+ .+|...|++++|||||++|||+ .|++|+|||
T Consensus 280 ~~-----------------~-----------------~~~-~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 280 RC-----------------M-----------------KTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp CC-----------------C-----------------EEE-ECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred cE-----------------E-----------------EEE-cCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 10 0 001 4799999999999999999997 799999996
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3.9e-31 Score=249.46 Aligned_cols=214 Identities=12% Similarity=0.137 Sum_probs=157.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|||||++||+|+.||+|+|||+.+.. ......+.+|+ +.|.+++|+|+++
T Consensus 59 ~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~---------~~~~~~~~~~~------------~~v~~v~~s~d~~-- 115 (311)
T d1nr0a1 59 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT---------HILKTTIPVFS------------GPVKDISWDSESK-- 115 (311)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEESSSTT---------CCEEEEEECSS------------SCEEEEEECTTSC--
T ss_pred CCEEEEEEeCCCCeEeccccCceEeeeeeeccc---------ccccccccccc------------Ccccccccccccc--
Confidence 469999999999999999999999999998642 22234577786 3599999999874
Q ss_pred eEEEeeC--CCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 84 HFLLSTN--DQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 84 ~~l~ss~--D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
.+++++. +..++||++++++ +..|...|++++|+|++..+|++|+.|++|++||++++........+ ..
T Consensus 116 ~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~-----~~ 190 (311)
T d1nr0a1 116 RIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH-----TK 190 (311)
T ss_dssp EEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC-----SS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceeeecccccccccccccccccccccccccc-----cc
Confidence 5666653 6679999998876 34567789999999987667999999999999999987543211110 01
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
.+..+. ..|++...++++.|+.|++||++.+... ..+.... ....+|.+.|.+++|+|+|+
T Consensus 191 ~i~~v~----------~~p~~~~l~~~~~d~~v~~~d~~~~~~~----~~~~~~~-----~~~~~h~~~V~~~~~s~~~~ 251 (311)
T d1nr0a1 191 FVHSVR----------YNPDGSLFASTGGDGTIVLYNGVDGTKT----GVFEDDS-----LKNVAHSGSVFGLTWSPDGT 251 (311)
T ss_dssp CEEEEE----------ECTTSSEEEEEETTSCEEEEETTTCCEE----EECBCTT-----SSSCSSSSCEEEEEECTTSS
T ss_pred cccccc----------cCcccccccccccccccccccccccccc----ccccccc-----cccccccccccccccCCCCC
Confidence 112222 2356666666778999999999875432 2222111 11347889999999999999
Q ss_pred EEEEe-cCCeEEEEeCCCCCCceeeecCC
Q psy12356 238 YMISR-DYLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 238 ~las~-~D~tIklWD~~~~~~~l~~~~~h 265 (400)
+|+++ .|++|+|||++++ +++++++.|
T Consensus 252 ~l~tgs~Dg~v~iwd~~t~-~~~~~l~~~ 279 (311)
T d1nr0a1 252 KIASASADKTIKIWNVATL-KVEKTIPVG 279 (311)
T ss_dssp EEEEEETTSEEEEEETTTT-EEEEEEECC
T ss_pred EEEEEeCCCeEEEEECCCC-cEEEEEECC
Confidence 99975 6999999999976 466666443
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=4.4e-30 Score=240.11 Aligned_cols=261 Identities=16% Similarity=0.191 Sum_probs=179.8
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++|+|+|||++||||+.||+|+|||+.++ +.+..+.+|.. .|.+++|+|++.
T Consensus 56 ~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~-----------~~~~~~~~~~~------------~v~~v~~~~~~~-- 110 (340)
T d1tbga_ 56 AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTT-----------NKVHAIPLRSS------------WVMTCAYAPSGN-- 110 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTT-----------EEEEEEECSCS------------CEEEEEECTTSS--
T ss_pred CCEEEEEECCCCCEEEEEECCCceeeeecccc-----------eeEEEEecccc------------cEEeeEeeccce--
Confidence 46999999999999999999999999999753 34567888873 499999999874
Q ss_pred eEEEeeCCCeEEEEEccCCCc--------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM--------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~--------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.+++++.|+++++|+...... ..+..........+. ..++....|.+.+.|+......... ....
T Consensus 111 ~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~- 183 (340)
T d1tbga_ 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD--NQIVTSSGDTTCALWDIETGQQTTT----FTGH- 183 (340)
T ss_dssp EEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEET--TEEEEEETTTEEEEEETTTTEEEEE----EECC-
T ss_pred eeeeecccceeecccccccccccccceecccccccccccccccc--ccccccccccccccccccccccccc----cccc-
Confidence 677789999999999865541 123344444444443 5678888999999999876632110 0000
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
....... ...+.....+++..|+.|++||++++... .. +.+|...|.+|+|+|+
T Consensus 184 ~~~~~~~----------~~~~~~~~~~~~~~d~~v~i~d~~~~~~~----~~------------~~~h~~~i~~v~~~p~ 237 (340)
T d1tbga_ 184 TGDVMSL----------SLAPDTRLFVSGACDASAKLWDVREGMCR----QT------------FTGHESDINAICFFPN 237 (340)
T ss_dssp SSCEEEE----------EECTTSSEEEEEETTTEEEEEETTTTEEE----EE------------ECCCSSCEEEEEECTT
T ss_pred ceeEeee----------ccccccceeEEeecCceEEEEECCCCcEE----EE------------EeCCCCCeEEEEECCC
Confidence 0000000 11123334455667999999999876532 11 3467889999999999
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEE
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSIS 314 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 314 (400)
|++|+++ .|++|++||++... ++..+..+ .+...|.+++
T Consensus 238 ~~~l~s~s~d~~i~~~~~~~~~-~~~~~~~~---------------------------------------~~~~~i~~~~ 277 (340)
T d1tbga_ 238 GNAFATGSDDATCRLFDLRADQ-ELMTYSHD---------------------------------------NIICGITSVS 277 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTTE-EEEEECCT---------------------------------------TCCSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEeecccc-cccccccc---------------------------------------cccCceEEEE
Confidence 9999974 69999999999753 44443211 1122244555
Q ss_pred EcCCCcEEeeccc----chh----------hcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 315 VNSDQLTVEASPR----GIF----------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 315 ~s~dg~~~~~~~~----~~~----------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
|+|+|+++++++. ++| ..||...|++|+|+|||++|||+ .|++|+|||
T Consensus 278 ~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 5555554443221 000 14899999999999999999997 699999997
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.97 E-value=5.3e-30 Score=241.64 Aligned_cols=249 Identities=9% Similarity=0.066 Sum_probs=182.7
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.+..++++|+|+.||.++ ++.|.+||+.+.. ..+.|.+|.. .|++++|+|+++ .
T Consensus 19 ~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~-----------~~~~~~~H~~------------~v~~~~~sp~g~--~ 72 (311)
T d1nr0a1 19 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLT-----------DTEIYTEHSH------------QTTVAKTSPSGY--Y 72 (311)
T ss_dssp CCCCCEECTTSSEEEEEE-TTEEEEEETTCSS-----------CCEEECCCSS------------CEEEEEECTTSS--E
T ss_pred CeEEEEEcCCCCEEEEEe-CCEEEEEECCCCc-----------eeEEEcCCCC------------CEEEEEEeCCCC--e
Confidence 455789999999999986 6689999997532 3456788873 499999999874 6
Q ss_pred EEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeC--CCeEEEEecccccccccccceeccCcc
Q psy12356 85 FLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSS--KGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~--Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
+++++.|++|+|||+.++. +..|...|.+++|+|++ ++|++++. +..+++||+++++.......+ .
T Consensus 73 latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~-~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h-----~ 146 (311)
T d1nr0a1 73 CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFDTGTSNGNLTGQ-----A 146 (311)
T ss_dssp EEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETTTCCBCBCCCCC-----S
T ss_pred EeccccCceEeeeeeeccccccccccccccCccccccccccc-ccccccccccccccccccccccccccccccc-----c
Confidence 7778999999999998765 23467789999999985 67888876 567999999987432221110 0
Q ss_pred cceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 157 CNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
..+..+.+ .|++ ...++++.||.|++||++++.... .+.+|...|.+++|+|+
T Consensus 147 ~~v~~v~~----------~~~~~~~l~sgs~d~~i~i~d~~~~~~~~----------------~~~~~~~~i~~v~~~p~ 200 (311)
T d1nr0a1 147 RAMNSVDF----------KPSRPFRIISGSDDNTVAIFEGPPFKFKS----------------TFGEHTKFVHSVRYNPD 200 (311)
T ss_dssp SCEEEEEE----------CSSSSCEEEEEETTSCEEEEETTTBEEEE----------------EECCCSSCEEEEEECTT
T ss_pred cccccccc----------cccceeeeccccccccccccccccccccc----------------ccccccccccccccCcc
Confidence 11222222 3444 345667789999999999765321 13467789999999999
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEE
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSIS 314 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 314 (400)
+++|+++ .|++|++||.+++. ++..++...
T Consensus 201 ~~~l~~~~~d~~v~~~d~~~~~-~~~~~~~~~------------------------------------------------ 231 (311)
T d1nr0a1 201 GSLFASTGGDGTIVLYNGVDGT-KTGVFEDDS------------------------------------------------ 231 (311)
T ss_dssp SSEEEEEETTSCEEEEETTTCC-EEEECBCTT------------------------------------------------
T ss_pred cccccccccccccccccccccc-ccccccccc------------------------------------------------
Confidence 9999975 68999999999753 344432100
Q ss_pred EcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCeeEEEEee
Q psy12356 315 VNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQSFNIVDI 375 (400)
Q Consensus 315 ~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~~~~~~~~ 375 (400)
....||...|++++|||||++||++ .|++|+|||+++. ++.+.++.
T Consensus 232 --------------~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~-~~~~~l~~ 278 (311)
T d1nr0a1 232 --------------LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL-KVEKTIPV 278 (311)
T ss_dssp --------------SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEEEEC
T ss_pred --------------cccccccccccccccCCCCCEEEEEeCCCeEEEEECCCC-cEEEEEEC
Confidence 0013788899999999999999997 6999999999864 46665544
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.97 E-value=3.2e-30 Score=239.09 Aligned_cols=259 Identities=14% Similarity=0.188 Sum_probs=175.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeee-eccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTF-QSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..|++|+|||||++||||+.||+|+|||+.+++ ..+.+ .+|. ..|.+++|+|++
T Consensus 13 ~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~-----------~~~~~~~~h~------------~~v~~v~~~~~g-- 67 (299)
T d1nr0a2 13 KAITALSSSADGKTLFSADAEGHINSWDISTGI-----------SNRVFPDVHA------------TMITGIKTTSKG-- 67 (299)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-----------EEECSSCSCS------------SCEEEEEECTTS--
T ss_pred CCcEEEEECCCCCEEEEEcCCCeEEEEECCCCc-----------EEEEEcCCCC------------CcEEEEEeeccc--
Confidence 469999999999999999999999999998643 23344 3565 459999999876
Q ss_pred ceEEEeeCCCeEEEEEccCCCcc-------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNME-------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~-------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.+++++.|+++++|+....... .+...+.+++|+|++ .++ .++.++.+++|+......... .
T Consensus 68 -~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g-~~~-~~~~~~~i~~~~~~~~~~~~~------~-- 136 (299)
T d1nr0a2 68 -DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADG-DIA-VAACYKHIAIYSHGKLTEVPI------S-- 136 (299)
T ss_dssp -CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTS-SCE-EEEESSEEEEEETTEEEEEEC------S--
T ss_pred -eeecccceeeEEEeccCCcccccccccccccccccccccccccc-ccc-ccccccccccccccccccccc------c--
Confidence 6888889999999998654421 234568899999975 444 455667899999654421100 0
Q ss_pred ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCC
Q psy12356 156 NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNS 235 (400)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpd 235 (400)
.....+ ...+++...+.++.||.|++||+++..... . ....|...|.+++|+|+
T Consensus 137 -~~~~~~----------~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~-----~----------~~~~~~~~i~~~~~~~~ 190 (299)
T d1nr0a2 137 -YNSSCV----------ALSNDKQFVAVGGQDSKVHVYKLSGASVSE-----V----------KTIVHPAEITSVAFSNN 190 (299)
T ss_dssp -SCEEEE----------EECTTSCEEEEEETTSEEEEEEEETTEEEE-----E----------EEEECSSCEEEEEECTT
T ss_pred -cccccc----------cccccccccccccccccccccccccccccc-----c----------ccccccccccccccccc
Confidence 001111 223555556667789999999998654311 0 02257789999999999
Q ss_pred CcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEE
Q psy12356 236 GRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSIS 314 (400)
Q Consensus 236 g~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 314 (400)
+++|+++ .|+.|++||+.++. ++..... ..+|...|++++
T Consensus 191 ~~~l~~~~~d~~i~~~~~~~~~-~~~~~~~--------------------------------------~~~h~~~v~~l~ 231 (299)
T d1nr0a2 191 GAFLVATDQSRKVIPYSVANNF-ELAHTNS--------------------------------------WTFHTAKVACVS 231 (299)
T ss_dssp SSEEEEEETTSCEEEEEGGGTT-EESCCCC--------------------------------------CCCCSSCEEEEE
T ss_pred cccccccccccccccccccccc-ccccccc--------------------------------------cccccccccccc
Confidence 9999864 68999999998753 2211100 023455566666
Q ss_pred EcCCCcEEeeccc----chh------------hccc-ccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 315 VNSDQLTVEASPR----GIF------------ADAH-TYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 315 ~s~dg~~~~~~~~----~~~------------~~gh-~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
|+|+|+++++.+. ++| ..+| ...|+++ ++|++++|+|+ .|++|||||+.
T Consensus 232 ~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 232 WSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSV-IWLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEE-EEEETTEEEEEETTSCEEEEECC
T ss_pred ccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEE-EECCCCEEEEEeCCCEEEEEecc
Confidence 6666666654321 010 1233 4456555 55778889986 79999999974
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=6.8e-29 Score=232.26 Aligned_cols=304 Identities=12% Similarity=0.077 Sum_probs=197.3
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+|+|++| ||++||||+.||+|+|||+.++ +++++|.+|+. .|.+|+|+|++ .
T Consensus 15 vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~-----------~~~~~l~~H~~------------~V~~l~~s~~~---~ 66 (355)
T d1nexb2 15 VITCLQF--EDNYVITGADDKMIRVYDSINK-----------KFLLQLSGHDG------------GVWALKYAHGG---I 66 (355)
T ss_dssp CEEEEEE--ETTEEEEEETTTEEEEEETTTT-----------EEEEEEECCSS------------CEEEEEEETTT---E
T ss_pred cEEEEEE--CCCEEEEEeCCCeEEEEECCCC-----------cEEEEEECCCC------------CEEEEEEcCCC---E
Confidence 3566655 6899999999999999999753 45778999974 59999999854 7
Q ss_pred EEEeeCCCeEEEEEccCCCcc------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccce----eccC
Q psy12356 85 FLLSTNDQSFNIVDIKPTNME------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKC----LIEG 154 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~----~~~~ 154 (400)
+++++.|++|++|++...... ..........++|+ ...+++++.|++|++||+++.......... ....
T Consensus 67 l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 145 (355)
T d1nexb2 67 LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN-IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH 145 (355)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETT-EEEEEEEETTSEEEEEECCC-----------CCCEEES
T ss_pred EEEEecccccccccccccccccccccccccccccccccccc-cceeeeecCCCcEEEEEccCCceeccccccceecccee
Confidence 888999999999999876521 11233456677886 478999999999999999887432211000 0000
Q ss_pred cccceec-eeccCchhhhh-hcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 155 TNCNCQG-LIVPESKREER-QSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 155 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
....... ......+...+ ...+++...+.+..|+.|++||++++... .. ..++...+.++.|
T Consensus 146 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~----~~------------~~~~~~~~~~~~~ 209 (355)
T d1nexb2 146 TPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCL----YI------------LSGHTDRIYSTIY 209 (355)
T ss_dssp CTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEE----EE------------ECCCSSCEEEEEE
T ss_pred ccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccce----ee------------eeccccccccccc
Confidence 0000000 00000000000 01123334455567999999999875432 11 1244567889999
Q ss_pred CCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCCcC-----CCCcc-cCCCCCceeecCcccccceeeccCccceeccc
Q psy12356 233 SNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHTKE-----ENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANA 305 (400)
Q Consensus 233 Spdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~-----~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~ 305 (400)
+|+++++++ +.|++|++||++++ .++..+++|... .++++ ++++.+++|++|++...... + ..
T Consensus 210 ~~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--------~-~~ 279 (355)
T d1nexb2 210 DHERKRCISASMDTTIRIWDLENG-ELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK--------F-SY 279 (355)
T ss_dssp ETTTTEEEEEETTSCEEEEETTTC-CEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCEE--------E-EE
T ss_pred cccceeeecccccceEEeeecccc-ccccccccccccccccccccceeeeeeccccccccccccccee--------c-cc
Confidence 999999886 57999999999986 468888888632 23444 45788999999987543221 1 23
Q ss_pred cccceEEE-EEcCCCcEEeecccc--------------hhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 306 HTYHINSI-SVNSDQLTVEASPRG--------------IFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 306 ~~~~i~~i-~~s~dg~~~~~~~~~--------------~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
|...+..+ .++|++++++++... ....+|...|.+++|+|+. .++++ .|++++||-++
T Consensus 280 ~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~~-~~~~~s~dg~~~l~~~d 353 (355)
T d1nexb2 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEILD 353 (355)
T ss_dssp ECTTCCCCCEEEECSSEEEEEETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETTE-EEEEEESSSCEEEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEeCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCCe-EEEEEECCCcEEEEEEe
Confidence 44455444 456777777654321 1125899999999999974 56665 69987777654
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=6.7e-27 Score=221.47 Aligned_cols=226 Identities=10% Similarity=0.112 Sum_probs=167.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+|+|+|||++||+|+.||+|+|||+.... .+....+.+|.. .|..++|+|++.
T Consensus 98 ~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~------------~v~~~~~~~~~~-- 154 (337)
T d1gxra_ 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT---------PRIKAELTSSAP------------ACYALAISPDSK-- 154 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----------EEEEEEECSSS------------CEEEEEECTTSS--
T ss_pred CcEEEEEEcCCCCEEEEeecccccccccccccc---------cccccccccccc------------cccccccccccc--
Confidence 358999999999999999999999999987532 234456677764 388899999764
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|+.|++||+.++++ ..+...|++++|+|++ +.+++++.|++|++||+++++.+..+. . ...+
T Consensus 155 ~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~-~~~~~~~~d~~v~i~d~~~~~~~~~~~-----~-~~~i 227 (337)
T d1gxra_ 155 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQLQQHD-----F-TSQI 227 (337)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE-----C-SSCE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccceeecccc-----c-ccce
Confidence 666788999999999988763 3466789999999985 789999999999999999885432210 0 0111
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+. ..+++...++++.|+.+++||++.+.... ...|...|.+++|+|+|++|
T Consensus 228 ~~l~----------~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-----------------~~~~~~~i~~v~~s~~g~~l 280 (337)
T d1gxra_ 228 FSLG----------YCPTGEWLAVGMESSNVEVLHVNKPDKYQ-----------------LHLHESCVLSLKFAYCGKWF 280 (337)
T ss_dssp EEEE----------ECTTSSEEEEEETTSCEEEEETTSSCEEE-----------------ECCCSSCEEEEEECTTSSEE
T ss_pred EEEE----------Ecccccccceecccccccccccccccccc-----------------ccccccccceEEECCCCCEE
Confidence 1222 23555555666789999999998754321 12577899999999999999
Q ss_pred EEe-cCCeEEEEeCCCCCCceeeecCCC------cCCCCccc-CCCCCceeecCcc
Q psy12356 240 ISR-DYLCVKVWDLHMESRPVETYPTHT------KEENGQLR-DPSNITALRVPQI 287 (400)
Q Consensus 240 as~-~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~~-~~~~~~~i~l~~~ 287 (400)
+++ .|++|++||+.++. ++..+..+. ++++|+++ +++.+++|++|++
T Consensus 281 ~s~s~Dg~i~iwd~~~~~-~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 281 VSTGKDNLLNAWRTPYGA-SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEETTSEEEEEETTTCC-EEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCC-EEEEccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 974 68999999999864 566664332 45677754 4567777777753
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=5.1e-27 Score=221.84 Aligned_cols=214 Identities=13% Similarity=0.144 Sum_probs=144.2
Q ss_pred eeEEEEEECC--CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccC
Q psy12356 4 YMREASQRFS--DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKN 81 (400)
Q Consensus 4 ~~v~~v~fsp--dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~ 81 (400)
..|++|+|+| +|++||||+.||+|+|||+....... .........+..|. ..|.+++|+|++.
T Consensus 64 ~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~---~~~~~~~~~~~~~~------------~~v~~v~~s~~~~ 128 (325)
T d1pgua1 64 SVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESN---SVEVNVKSEFQVLA------------GPISDISWDFEGR 128 (325)
T ss_dssp SCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGT---EEEEEEEEEEECCS------------SCEEEEEECTTSS
T ss_pred CCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCccee---eeeccccccccccc------------CcEEEEEECCCCC
Confidence 4699999998 67899999999999999986532110 00001112233343 4599999999874
Q ss_pred CceEEEe--eCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc
Q psy12356 82 QAHFLLS--TNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT 155 (400)
Q Consensus 82 ~~~~l~s--s~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~ 155 (400)
.++++ +.|+.+++|+.++++ +..|...|++++|+|++..++++++.|+.+++||+...+.... .....
T Consensus 129 --~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~----~~~~~ 202 (325)
T d1pgua1 129 --RLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS----DRTHH 202 (325)
T ss_dssp --EEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEE----ECSSS
T ss_pred --ccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeeccccccccccccccccee----ccccc
Confidence 55554 357899999998876 3457788999999998777789999999999999887643211 11111
Q ss_pred c--cceeceeccCchhhhhhcccC-cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 156 N--CNCQGLIVPESKREERQSSQN-RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 156 ~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
. ..+..+.+ .|+ +...++++.|+.|++||++++... +.+ .+|...+.++.|
T Consensus 203 ~~~~~v~~v~~----------~pd~~~~l~s~~~d~~i~iwd~~~~~~~----~~l------------~~~~~~v~~~~~ 256 (325)
T d1pgua1 203 KQGSFVRDVEF----------SPDSGEFVITVGSDRKISCFDGKSGEFL----KYI------------EDDQEPVQGGIF 256 (325)
T ss_dssp CTTCCEEEEEE----------CSTTCCEEEEEETTCCEEEEETTTCCEE----EEC------------CBTTBCCCSCEE
T ss_pred CCCCccEEeee----------ccccceeccccccccceeeeeecccccc----ccc------------ccccccccccee
Confidence 0 11222222 343 345666678999999999876532 222 244444544444
Q ss_pred C---CCCcEEEE-ecCCeEEEEeCCCCCCceeeecCC
Q psy12356 233 S---NSGRYMIS-RDYLCVKVWDLHMESRPVETYPTH 265 (400)
Q Consensus 233 S---pdg~~las-~~D~tIklWD~~~~~~~l~~~~~h 265 (400)
+ |||++|++ +.|++|+|||++++ .+++.+..|
T Consensus 257 s~~~~dg~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~ 292 (325)
T d1pgua1 257 ALSWLDSQKFATVGADATIRVWDVTTS-KCVQKWTLD 292 (325)
T ss_dssp EEEESSSSEEEEEETTSEEEEEETTTT-EEEEEEECC
T ss_pred eeeccCCCEEEEEeCCCeEEEEECCCC-CEEEEEEec
Confidence 4 78888886 57999999999976 467766544
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=8.1e-27 Score=223.16 Aligned_cols=243 Identities=16% Similarity=0.220 Sum_probs=165.7
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|++|+|+|||++||+|+.||+|++||...+ +.+..+.+|.. .|.+++|++++. .
T Consensus 123 ~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~-----------~~~~~~~~h~~------------~v~~~~~~~~~~--~ 177 (388)
T d1erja_ 123 YIRSVCFSPDGKFLATGAEDRLIRIWDIENR-----------KIVMILQGHEQ------------DIYSLDYFPSGD--K 177 (388)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTT-----------EEEEEECCCSS------------CEEEEEECTTSS--E
T ss_pred CEEEEEECCCCCcceeccccccccccccccc-----------ccccccccccc------------cccccccccccc--c
Confidence 4899999999999999999999999998753 34556777873 489999998764 6
Q ss_pred EEEeeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc--ccce
Q psy12356 85 FLLSTNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT--NCNC 159 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~--~~~~ 159 (400)
+++++.++.|++||+.+.... .+......+.|+|.++++|++++.|+.|++||++++.............. ...+
T Consensus 178 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v 257 (388)
T d1erja_ 178 LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV 257 (388)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCE
T ss_pred ccccccceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCE
Confidence 777899999999999876531 23344566777776678999999999999999998754322111000000 0112
Q ss_pred eceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEE
Q psy12356 160 QGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM 239 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l 239 (400)
..+. ..+++...++++.||.|++||++.+..... ...+...........|...|.+++|+|+|++|
T Consensus 258 ~~l~----------~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 323 (388)
T d1erja_ 258 YSVV----------FTRDGQSVVSGSLDRSVKLWNLQNANNKSD----SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI 323 (388)
T ss_dssp EEEE----------ECTTSSEEEEEETTSEEEEEEC-------------------CEEEEEECCSSCEEEEEECGGGCEE
T ss_pred EEEE----------ECCCCCEEEEEECCCcEEEEeccCCccccc----cccccccceeeecccccceEEEEEECCCCCEE
Confidence 2222 235665666777899999999987643211 11111001111134677899999999999999
Q ss_pred EEe-cCCeEEEEeCCCCCCceeeecCCC-------------cCCCCccc-CCCCCceeecCcc
Q psy12356 240 ISR-DYLCVKVWDLHMESRPVETYPTHT-------------KEENGQLR-DPSNITALRVPQI 287 (400)
Q Consensus 240 as~-~D~tIklWD~~~~~~~l~~~~~h~-------------~~~~g~~~-~~~~~~~i~l~~~ 287 (400)
+++ .|++|++||++++ .++.++++|. +.|+|.++ +++.|++|++|++
T Consensus 324 ~sg~~dg~i~vwd~~~~-~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~ 385 (388)
T d1erja_ 324 LSGSKDRGVLFWDKKSG-NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385 (388)
T ss_dssp EEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred EEEeCCCEEEEEECCCC-cEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEee
Confidence 975 6899999999986 5788999885 24566654 4667777777765
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.95 E-value=2e-26 Score=221.46 Aligned_cols=247 Identities=10% Similarity=0.106 Sum_probs=168.6
Q ss_pred ceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC------cccccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 69 EKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN------MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 69 ~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~------~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
+.|++++|+|++. .+++++.|++|+|||+++++ +++|...|++++|+|++ ++|++++.|++|++||++++.
T Consensus 8 ~pIt~~~~s~dg~--~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~-~~l~s~s~D~~i~vWd~~~~~ 84 (371)
T d1k8kc_ 8 EPISCHAWNKDRT--QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRT 84 (371)
T ss_dssp SCCCEEEECTTSS--EEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTE
T ss_pred CCeEEEEECCCCC--EEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCC-CEEEEEECCCeEEEEeecccc
Confidence 4589999999874 67778899999999998775 34678899999999985 799999999999999998763
Q ss_pred ccccccceeccCc--ccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccc
Q psy12356 143 LCDRHSKCLIEGT--NCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFF 220 (400)
Q Consensus 143 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
... ..... ...+..+. ..|++...++++.|++|++|++........ . ....
T Consensus 85 ~~~-----~~~~~~~~~~v~~i~----------~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~----~--------~~~~ 137 (371)
T d1k8kc_ 85 WKP-----TLVILRINRAARCVR----------WAPNEKKFAVGSGSRVISICYFEQENDWWV----C--------KHIK 137 (371)
T ss_dssp EEE-----EEECCCCSSCEEEEE----------ECTTSSEEEEEETTSSEEEEEEETTTTEEE----E--------EEEC
T ss_pred ccc-----ccccccccccccccc----------cccccccceeecccCcceeeeeeccccccc----c--------cccc
Confidence 211 11110 01122222 235665566667899999999875432100 0 0112
Q ss_pred cccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCcc
Q psy12356 221 SEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPR 299 (400)
Q Consensus 221 ~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~ 299 (400)
..|...|.+++|+|+|++|+++ .|++|++||...... ..... . .+.+. + .. .+...
T Consensus 138 ~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~-~~~~~-~--~~~~~----------~---~~------~~~~~ 194 (371)
T d1k8kc_ 138 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEV-EERPA-P--TPWGS----------K---MP------FGELM 194 (371)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTT-SCCCC-C--BTTBS----------C---CC------TTCEE
T ss_pred cccccccccccccccccceeccccCcEEEEEeeccCcc-ccccc-c--ccccc----------c---cc------ceeee
Confidence 3577889999999999999975 699999999986431 11110 0 00000 0 00 00000
Q ss_pred ceeccccccceEEEEEcCCCcEEeecccc----hh----------hcccccceeEEEEccCCCEEEEecCCeEEEEeCcc
Q psy12356 300 RIFANAHTYHINSISVNSDQLTVEASPRG----IF----------ADAHTYHISSTSVNSDQETYLSADDLRINLWHLEI 365 (400)
Q Consensus 300 ~~~~~~~~~~i~~i~~s~dg~~~~~~~~~----~~----------~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~ 365 (400)
.. ..+|...|.+++|+|||+++++.+.. +| ..+|..+|.+++|+|||++||++.|+.+++|..+.
T Consensus 195 ~~-~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~ 273 (371)
T d1k8kc_ 195 FE-SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 273 (371)
T ss_dssp EE-CCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred ee-ccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeecccccceeeeecCCCCEEEEEcCCceEEEEeeC
Confidence 11 24688899999999999988754321 11 14789999999999999999998788888888765
Q ss_pred CCee
Q psy12356 366 TDQS 369 (400)
Q Consensus 366 ~~~~ 369 (400)
....
T Consensus 274 ~~~~ 277 (371)
T d1k8kc_ 274 AAGK 277 (371)
T ss_dssp TTTE
T ss_pred CCce
Confidence 5433
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=7e-26 Score=210.41 Aligned_cols=283 Identities=10% Similarity=0.118 Sum_probs=188.4
Q ss_pred ECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeC
Q psy12356 11 RFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTN 90 (400)
Q Consensus 11 fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~ 90 (400)
+++||++|||||.||+|+|||+.++ ++++++.+|+. .|.+++|+|+ .+++++.
T Consensus 23 ~~~~g~~l~sgs~Dg~i~vWd~~~~-----------~~~~~~~~h~~------------~V~~v~~~~~----~l~s~s~ 75 (342)
T d2ovrb2 23 LQFCGNRIVSGSDDNTLKVWSAVTG-----------KCLRTLVGHTG------------GVWSSQMRDN----IIISGST 75 (342)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTC-----------CEEEECCCCSS------------CEEEEEEETT----EEEEEET
T ss_pred EEECCCEEEEEeCCCeEEEEECCCC-----------CEEEEEeCCCC------------CEEEEEeCCC----cccccee
Confidence 6668999999999999999999754 35678889974 4999999863 6888899
Q ss_pred CCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccC
Q psy12356 91 DQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPE 166 (400)
Q Consensus 91 D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (400)
|+++++|+...... ......+....+.+ ..++.+..|+++.+||.+++....... ......
T Consensus 76 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~i~~~~~~~~~~~~~~~----~~~~~~-------- 140 (342)
T d2ovrb2 76 DRTLKVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLM----GHVAAV-------- 140 (342)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEE----CCSSCE--------
T ss_pred cccccccccccccceecccccceeEeeeeccc---ccccccccceeEEEeecccccceeeee----cccccc--------
Confidence 99999999876652 12233455544443 467889999999999998874321100 000000
Q ss_pred chhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-ecCC
Q psy12356 167 SKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-RDYL 245 (400)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~ 245 (400)
..........+.++.|+.|++||.+..... .. +.+|...+. .++++++++++ +.|+
T Consensus 141 -----~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~----~~------------~~~~~~~~~--~~~~~~~~l~s~~~dg 197 (342)
T d2ovrb2 141 -----RCVQYDGRRVVSGAYDFMVKVWDPETETCL----HT------------LQGHTNRVY--SLQFDGIHVVSGSLDT 197 (342)
T ss_dssp -----EEEEECSSCEEEEETTSCEEEEEGGGTEEE----EE------------ECCCSSCEE--EEEECSSEEEEEETTS
T ss_pred -----eeeccccceeeeecCCCeEEEeecccceee----EE------------EcCcccccc--cccCCCCEEEEEeCCC
Confidence 000011122334457999999999865432 11 224544554 45557888886 5799
Q ss_pred eEEEEeCCCCCCceeeecCCCc-----CCCCcc-cCCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCC
Q psy12356 246 CVKVWDLHMESRPVETYPTHTK-----EENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQ 319 (400)
Q Consensus 246 tIklWD~~~~~~~l~~~~~h~~-----~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg 319 (400)
+|++||++.+ .+++.+.+|.. .+++.+ ++++.++.+++|++...+....- .....|...+..+.++|
T Consensus 198 ~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~-- 270 (342)
T d2ovrb2 198 SIRVWDVETG-NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTL----QGPNKHQSAVTCLQFNK-- 270 (342)
T ss_dssp CEEEEETTTC-CEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEE----CSTTSCSSCEEEEEECS--
T ss_pred eEEEeecccc-eeeeEecccccceeEEecCCCEEEEEcCCCEEEEEecccccccccc----cccceeeeceeecccCC--
Confidence 9999999986 47888888852 234454 45778899999987654321100 00124566667666654
Q ss_pred cEEeeccc----chh---------------hcccccceeEEEEccCCCEEEEe-cCCe----EEEEeCcc
Q psy12356 320 LTVEASPR----GIF---------------ADAHTYHISSTSVNSDQETYLSA-DDLR----INLWHLEI 365 (400)
Q Consensus 320 ~~~~~~~~----~~~---------------~~gh~~~V~~i~fspDg~~las~-~D~~----i~lW~~~~ 365 (400)
+++++++. ++| ..+|...|++|+|+|||.+||++ .||+ |++||++.
T Consensus 271 ~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 271 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 45554321 111 13788999999999999999997 5775 99999874
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.5e-26 Score=206.46 Aligned_cols=267 Identities=12% Similarity=0.174 Sum_probs=169.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|+|++ +||++||||+.||+|+|||+.++ +++++|.+|+. .|.+|+|. + ..
T Consensus 17 ~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~-----------~~~~~l~~H~~------------~V~~v~~~--~--~~ 67 (293)
T d1p22a2 17 GVYCLQ--YDDQKIVSGLRDNTIKIWDKNTL-----------ECKRILTGHTG------------SVLCLQYD--E--RV 67 (293)
T ss_dssp CEEEEE--CCSSEEEEEESSSCEEEEESSSC-----------CEEEEECCCSS------------CEEEEECC--S--SE
T ss_pred CEEEEE--EcCCEEEEEeCCCeEEEEECCCC-----------cEEEEEecCCC------------CEeeeecc--c--ce
Confidence 467764 58999999999999999999753 35678999984 48888874 3 26
Q ss_pred EEEeeCCCeEEEEEccCCCccc--ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceece
Q psy12356 85 FLLSTNDQSFNIVDIKPTNMEE--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGL 162 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (400)
+++++.|++|++|++..+.... .........+.+. ...++++..++.+++||.......... ....... ..+...
T Consensus 68 l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~v~~~ 144 (293)
T d1p22a2 68 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPTDITLR-RVLVGHR-AAVNVV 144 (293)
T ss_dssp EEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC-TTEEEEEETTSCEEEEECSSSSCCEEE-EEECCCS-SCEEEE
T ss_pred eeccccccccccccccccccccccccccccccccccc-ccceeecccccceeEeecccccccccc-ccccccc-cccccc
Confidence 7788999999999998876321 1111112233343 357899999999999998876321100 0000000 000000
Q ss_pred eccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-
Q psy12356 163 IVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS- 241 (400)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las- 241 (400)
...... ....+.|+.|++||+++++.. .. +.+|...|..+.++ +.++++
T Consensus 145 ----------~~~~~~--~~~~s~d~~i~~~d~~~~~~~----~~------------~~~~~~~v~~~~~~--~~~l~~~ 194 (293)
T d1p22a2 145 ----------DFDDKY--IVSASGDRTIKVWNTSTCEFV----RT------------LNGHKRGIACLQYR--DRLVVSG 194 (293)
T ss_dssp ----------EEETTE--EEEEETTSEEEEEETTTCCEE----EE------------EECCSSCEEEEEEE--TTEEEEE
T ss_pred ----------eecccc--cccccCCCceeeecCCCCcEE----EE------------EcccccccccccCC--CCeEEEe
Confidence 001111 223346999999999876532 11 23455677777775 456775
Q ss_pred ecCCeEEEEeCCCCCCceeeecCCCc-----CCCCcc-cCCCCCceeecCcccccceeeccCccceeccccccceEEEEE
Q psy12356 242 RDYLCVKVWDLHMESRPVETYPTHTK-----EENGQL-RDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISV 315 (400)
Q Consensus 242 ~~D~tIklWD~~~~~~~l~~~~~h~~-----~~~g~~-~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 315 (400)
+.|++|+|||+++. .++..+.+|.. ..++.+ ++++.++.+++|++...... ... .....+.
T Consensus 195 ~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~------~~~--~~~~~~~---- 261 (293)
T d1p22a2 195 SSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDP------RAP--AGTLCLR---- 261 (293)
T ss_dssp ETTSCEEEEETTTC-CEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTST------TSC--TTTTEEE----
T ss_pred cCCCEEEEEecccc-eeeeeecccceeeeeccccceEEEEEcCCCEEEEEECCCCccc------ccc--CCceeeE----
Confidence 57999999999986 46777777752 244444 34667788888875321110 000 0000000
Q ss_pred cCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEe
Q psy12356 316 NSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWH 362 (400)
Q Consensus 316 s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~ 362 (400)
. ..+|.+.|++|+| |+++|||+ .|++|+|||
T Consensus 262 -------------~-~~~H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 262 -------------T-LVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp -------------E-ECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred -------------E-ecCCCCCEEEEEE--cCCEEEEEecCCEEEEeC
Confidence 0 1489999999998 56789997 699999997
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=6.6e-26 Score=219.45 Aligned_cols=285 Identities=13% Similarity=0.143 Sum_probs=165.6
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEecc-CC
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRK-NQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~-~~ 82 (400)
..|.+|++++ ++|+|||.|++|+|||........ ..........|... . ..+......+.. .+
T Consensus 15 ~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~-----~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~ 78 (393)
T d1sq9a_ 15 ADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNEN-----PKDKSYSHFVHKSG------L---HHVDVLQAIERDAFE 78 (393)
T ss_dssp SCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCC-----GGGGEEEEECCTTC------E---EEEEEEEEEETTTEE
T ss_pred CccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCc-----ccceeEeeeeccCC------c---eEeeeEeeeccCCCC
Confidence 4688898865 699999999999999976432111 01001111122210 0 001111222211 11
Q ss_pred ce-EEEeeCCCeEEEEEccCCCc----c----------cccccEEEEEEecCC----CCEEEEEeCCCeEEEEecccccc
Q psy12356 83 AH-FLLSTNDQSFNIVDIKPTNM----E----------ELNEVITAAEFHPID----CNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 83 ~~-~l~ss~D~tI~lWd~~~~~~----~----------~~~~~V~sv~f~p~~----~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
.. +++++.|++|++|++..... . .+...+.+++|.++. ..++++++.|+++++||+.....
T Consensus 79 ~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~ 158 (393)
T d1sq9a_ 79 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD 158 (393)
T ss_dssp EEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred CcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCc
Confidence 23 33567899999999865431 0 112357788887754 35789999999999999865421
Q ss_pred cc----cccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccc
Q psy12356 144 CD----RHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSF 219 (400)
Q Consensus 144 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
.. .+......+.. ..............+..++++ ..++++.||+|++||+++++.. ..+.. ...
T Consensus 159 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~----~~~~~------~~~ 226 (393)
T d1sq9a_ 159 ESNSLTLNWSPTLELQG-TVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL----YNFES------QHS 226 (393)
T ss_dssp HHHHTTTCCCCEEEEEE-EECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE----EEEEC------CC-
T ss_pred ccceeeeeeccceeccc-ceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccc----ccccc------ccc
Confidence 00 00000000000 000000000000112234555 3567788999999999876542 12211 112
Q ss_pred ccccccCeEEEEECCCCcEEEEe-cCC---eEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeec
Q psy12356 220 FSEIISSISDVKISNSGRYMISR-DYL---CVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVE 295 (400)
Q Consensus 220 ~~~h~~~V~~v~fSpdg~~las~-~D~---tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~ 295 (400)
+.+|..+|.+|+|||||++|+++ .|+ .|+|||++++. +++.+...... .
T Consensus 227 l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~-~~~~l~~~~~~-------------~------------- 279 (393)
T d1sq9a_ 227 MINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE-RIGSLSVPTHS-------------S------------- 279 (393)
T ss_dssp --CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC-EEEEECBC------------------------------
T ss_pred cccccceEEEcccccccceeeeecCCCCcceeeecccccce-eeeeecccccc-------------c-------------
Confidence 45788999999999999999975 565 59999999864 55555321100 0
Q ss_pred cCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCeeEEEEe
Q psy12356 296 ASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQSFNIVD 374 (400)
Q Consensus 296 ~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~~~~~~~ 374 (400)
. . . ....||...|++|+|||||++|||+ .|++|||||++++ ++..++.
T Consensus 280 -~---~--~------------------------~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g-~~~~~l~ 328 (393)
T d1sq9a_ 280 -Q---A--S------------------------LGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLN 328 (393)
T ss_dssp ----------------------------------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEE
T ss_pred -c---c--e------------------------eeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCC-CEEEEEC
Confidence 0 0 0 0014899999999999999999997 6999999999864 4666654
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=1.7e-25 Score=207.14 Aligned_cols=263 Identities=12% Similarity=0.037 Sum_probs=161.8
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|++|+|||||++||+||.||+|+|||+++... ... +....+|. ..|.+++|+|++. ..
T Consensus 13 ~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~-------~~~-~~~~~~h~------------~~V~~v~f~~~~~-~~ 71 (342)
T d1yfqa_ 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK-------NVD-LLQSLRYK------------HPLLCCNFIDNTD-LQ 71 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT-------EEE-EEEEEECS------------SCEEEEEEEESSS-EE
T ss_pred CEEEEEEeCCCCEEEEEECCCeEEEEEccCCCc-------ceE-EEEecCCC------------CCEEEEEEeCCCC-CE
Confidence 489999999999999999999999999875421 112 22333576 3599999999753 35
Q ss_pred EEEeeCCCeEEEEEccCCCcc----cc-cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCc-ccc
Q psy12356 85 FLLSTNDQSFNIVDIKPTNME----EL-NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGT-NCN 158 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~----~~-~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~-~~~ 158 (400)
+++++.|++|++|++..+... .+ ........+.++ ...+++++.|+++++||++.+.............. ...
T Consensus 72 l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T d1yfqa_ 72 IYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp EEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred EEEcccccceeeeecccccccccccccccccccccccccc-cccccccccccccceeeccccccceeeecccccccccce
Confidence 666889999999999876521 11 222334445554 57899999999999999987743211100000000 000
Q ss_pred eeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECC-CCc
Q psy12356 159 CQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISN-SGR 237 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSp-dg~ 237 (400)
.... ...+.....+.++.|+.|++||++......... . ...+...+.++.+.| ++.
T Consensus 151 ~~~~----------~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~--~-----------~~~~~~~~~~~~~~~~~~~ 207 (342)
T d1yfqa_ 151 NKIF----------TMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTI--E-----------ESGLKYQIRDVALLPKEQE 207 (342)
T ss_dssp CCEE----------EEEECSSEEEEEESTTEEEEEESSCCTTCCCEE--E-----------ECSCSSCEEEEEECSGGGC
T ss_pred eeee----------eeeccCCceeeecCCCcEEEEecccCcccceee--e-----------ecccccceeeeEeecCCCC
Confidence 0000 001222233445579999999998754321100 0 012223455666555 566
Q ss_pred EEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEEEc
Q psy12356 238 YMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVN 316 (400)
Q Consensus 238 ~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s 316 (400)
.+++ +.|+.+++|+........ ... ....... +.
T Consensus 208 ~~~~~s~dg~~~v~~~~~~~~~~-~~~--------------~~~~~~~---------------------~~--------- 242 (342)
T d1yfqa_ 208 GYACSSIDGRVAVEFFDDQGDDY-NSS--------------KRFAFRC---------------------HR--------- 242 (342)
T ss_dssp EEEEEETTSEEEEEECCTTCCST-TCT--------------TCEEEEC---------------------CC---------
T ss_pred EEEeecCCCeEEEEEecCCccee-ecc--------------ccceeee---------------------ee---------
Confidence 6665 579999999998643211 000 0000000 00
Q ss_pred CCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 317 SDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 317 ~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
......+|...|++|+|||++++|||+ .|++|+|||++..+
T Consensus 243 ----------~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~ 284 (342)
T d1yfqa_ 243 ----------LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp ----------CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred ----------eccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCc
Confidence 000113688899999999999999997 69999999998644
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.94 E-value=1.8e-26 Score=217.63 Aligned_cols=295 Identities=15% Similarity=0.069 Sum_probs=177.0
Q ss_pred EEEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 7 EASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 7 ~~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
.+-.||| ||+++|+++ +|.|+|||+.++. .++ + +|. ..|.+++|+||++ .+
T Consensus 6 ~~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~-----------~~~-~-~~~------------~~v~~~~~spDg~--~l 57 (360)
T d1k32a3 6 FAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY-----------VLK-V-PEP------------LRIRYVRRGGDTK--VA 57 (360)
T ss_dssp GEEEEEECGGGCEEEEE-TTEEEEECTTSSB-----------EEE-C-SCC------------SCEEEEEECSSSE--EE
T ss_pred hcccccCCCCCEEEEEE-CCeEEEEECCCCc-----------EEE-c-cCC------------CCEEEEEECCCCC--EE
Confidence 3567999 999999987 5799999997531 222 2 454 4599999999874 55
Q ss_pred EEeeCC--CeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 86 LLSTND--QSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 86 l~ss~D--~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
++++.| ..|++||.++++. ..+...|.+++|+|++ ++|++++.|+.+++|++.++....... .......
T Consensus 58 ~~~~~~~g~~v~v~d~~~~~~~~~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 131 (360)
T d1k32a3 58 FIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPTVIER-----SREAMIT 131 (360)
T ss_dssp EEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEE-----CSSSCCC
T ss_pred EEEEcCCCCEEEEEECCCCcEEEeeCCCceEEeeeecccc-cccceeccccccccccccccceeeeee-----ccccccc
Confidence 555543 4899999998874 4566789999999985 799999999999999998875322110 0001111
Q ss_pred ceeccCchhhhhhcccCccee----------ecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEE
Q psy12356 161 GLIVPESKREERQSSQNRREK----------EDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDV 230 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 230 (400)
.+.+ ++++... ..+..++.+++||+.++.... +..|...+..+
T Consensus 132 ~~~~----------spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-----------------~~~~~~~~~~~ 184 (360)
T d1k32a3 132 DFTI----------SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA-----------------ATTENSHDYAP 184 (360)
T ss_dssp CEEE----------CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEE-----------------CSCSSSBEEEE
T ss_pred chhh----------ccceeeeeeeccccccceeeccccceeeeccccCceee-----------------ecccccccccc
Confidence 2222 2333221 134567789999998754321 11344568889
Q ss_pred EECCCCcEEEE-ecCCeEEEEeCCCCCC------ceeeecCCC-------cCCCCcccCCCC----CceeecCcccccce
Q psy12356 231 KISNSGRYMIS-RDYLCVKVWDLHMESR------PVETYPTHT-------KEENGQLRDPSN----ITALRVPQIKPIEL 292 (400)
Q Consensus 231 ~fSpdg~~las-~~D~tIklWD~~~~~~------~l~~~~~h~-------~~~~g~~~~~~~----~~~i~l~~~~~~~~ 292 (400)
+|+|||++|+. +.|+.+++||...... ....+..|. +.+++..+.... ....++|.+...
T Consensus 185 ~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-- 262 (360)
T d1k32a3 185 AFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVD-- 262 (360)
T ss_dssp EECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCC--
T ss_pred cccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccC--
Confidence 99999999996 5789999999875421 011111221 122222211000 000111111000
Q ss_pred eeccCccceeccccccceEEEEEcCCCc---EEeeccc----chh------hcccccceeEEEEccCCCEEEEe-cCCeE
Q psy12356 293 TVEASPRRIFANAHTYHINSISVNSDQL---TVEASPR----GIF------ADAHTYHISSTSVNSDQETYLSA-DDLRI 358 (400)
Q Consensus 293 ~~~~~~~~~~~~~~~~~i~~i~~s~dg~---~~~~~~~----~~~------~~gh~~~V~~i~fspDg~~las~-~D~~i 358 (400)
.+....+ ..+...+..+.+.+++. +++.... ..+ ...|.+.|.+++|||||++|+++ .|++|
T Consensus 263 --~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~v~~~~~SpDG~~l~~~~~Dg~i 338 (360)
T d1k32a3 263 --PGDYRMI--IPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKI 338 (360)
T ss_dssp --CBCEEEE--EECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEEEEEEEEEECTTSCEEEEEETTSCE
T ss_pred --cCceeEe--eecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEEEecCCcCEEEECCCCCEEEEEECCCeE
Confidence 0000001 12223333333333322 1221111 011 13677789999999999999997 79999
Q ss_pred EEEeCccCCe
Q psy12356 359 NLWHLEITDQ 368 (400)
Q Consensus 359 ~lW~~~~~~~ 368 (400)
++||++.++.
T Consensus 339 ~v~d~~~~~~ 348 (360)
T d1k32a3 339 YTFPLEKPED 348 (360)
T ss_dssp EEEESSCTTS
T ss_pred EEEECCCCCc
Confidence 9999987664
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=5.1e-26 Score=209.39 Aligned_cols=252 Identities=12% Similarity=0.093 Sum_probs=161.2
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|++++|+| ||||+.||+|++||+.+ ..++|+. .|.+++|+++.
T Consensus 14 ~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~----------------~~~~h~~------------~V~~~~~~~~~--- 58 (287)
T d1pgua2 14 KGITALTVNP----LISGSYDGRIMEWSSSS----------------MHQDHSN------------LIVSLDNSKAQ--- 58 (287)
T ss_dssp SCEEEEETTT----TEEEETTSCEEETTTTE----------------EECCCCS------------CEEEEECCSTT---
T ss_pred CceEEEEECc----EEEEeCCCeEEEEECCC----------------CCCCCCC------------CEEEEEecCCC---
Confidence 3589999998 99999999999999863 2346763 48899987643
Q ss_pred eEEEeeCCCeEEEEEccCCCcccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceecee
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLI 163 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
.+++++.|++|++|++...++ ...+..+++++++ .+ +..+.++.+.+|+..++........ ... . .
T Consensus 59 ~~~s~s~D~~v~~w~~~~~~~---~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~--~- 124 (287)
T d1pgua2 59 EYSSISWDDTLKVNGITKHEF---GSQPKVASANNDG-FT-AVLTNDDDLLILQSFTGDIIKSVRL----NSP--G--S- 124 (287)
T ss_dssp CCEEEETTTEEEETTEEEEEC---SSCEEEEEECSSS-EE-EEEETTSEEEEEETTTCCEEEEEEC----SSC--E--E-
T ss_pred eEEEEeecccccccccccccc---ccceeeeeeccCC-ce-EEEeecccceeeeccceeeeeeccc----cce--e--e-
Confidence 688889999999999865432 3346678888864 44 4456677788999888743221100 000 0 0
Q ss_pred ccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe
Q psy12356 164 VPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR 242 (400)
Q Consensus 164 ~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~ 242 (400)
...++. ....++..++.+++|++....... .+ ...|...+.+++|+|+|++|+++
T Consensus 125 ---------~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~----~~-----------~~~~~~~v~~~~~s~~~~~l~~g 180 (287)
T d1pgua2 125 ---------AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF----DL-----------KTPLRAKPSYISISPSETYIAAG 180 (287)
T ss_dssp ---------EEEECSSEEEEEETTTSCEEEEETTEEEEEE----EC-----------SSCCSSCEEEEEECTTSSEEEEE
T ss_pred ---------eeeccCcceeeeccccceeeeeeccccceee----ee-----------eeccCCceeEEEeccCccccccc
Confidence 011222 222333345689999987654321 01 11355789999999999999875
Q ss_pred -cCCeEEEEeCCCCCCceeeecCCCc-------CCCC----------ccc-CCCCCceeecCcccccceeeccCccceec
Q psy12356 243 -DYLCVKVWDLHMESRPVETYPTHTK-------EENG----------QLR-DPSNITALRVPQIKPIELTVEASPRRIFA 303 (400)
Q Consensus 243 -~D~tIklWD~~~~~~~l~~~~~h~~-------~~~g----------~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~ 303 (400)
.|+.|++||+.++......+.+|.. .|++ .++ +++.++++++|++..
T Consensus 181 ~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~-------------- 246 (287)
T d1pgua2 181 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR-------------- 246 (287)
T ss_dssp ETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSC--------------
T ss_pred cccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCC--------------
Confidence 6899999999986433344666641 1211 111 122333333332210
Q ss_pred cccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeC
Q psy12356 304 NAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHL 363 (400)
Q Consensus 304 ~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~ 363 (400)
.++.+ ....||...|++|+|+||++ |+|+ .|++||+|++
T Consensus 247 --------------~~~~~------~~~~~h~~~V~~v~~~~~~~-l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 247 --------------PMKII------KALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286 (287)
T ss_dssp --------------TTCCE------EETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred --------------CCeEE------EEeCCCCCCeEEEEECCCCE-EEEEECCCeEEEEEE
Confidence 00000 11258999999999999986 6665 7999999985
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.94 E-value=5.5e-25 Score=203.38 Aligned_cols=225 Identities=11% Similarity=0.125 Sum_probs=157.1
Q ss_pred eeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCc-----ccccccEEEEEEecCCCC
Q psy12356 48 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNM-----EELNEVITAAEFHPIDCN 122 (400)
Q Consensus 48 ~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~-----~~~~~~V~sv~f~p~~~~ 122 (400)
+.++++||+. .|++|+|+|+++ .+++++.|++|+|||+++++. ..|...|++++|+|++ .
T Consensus 4 ~~~~~~GH~~------------~V~~l~~s~dg~--~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g-~ 68 (299)
T d1nr0a2 4 IDQVRYGHNK------------AITALSSSADGK--TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG-D 68 (299)
T ss_dssp EEEEECCCSS------------CEEEEEECTTSS--EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-C
T ss_pred cceEcCCCCC------------CcEEEEECCCCC--EEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccc-e
Confidence 4578899984 499999999874 677789999999999998772 3467789999999975 4
Q ss_pred EEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccC
Q psy12356 123 LFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCD 202 (400)
Q Consensus 123 ~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~ 202 (400)
+++++.|+++++|+......... .
T Consensus 69 -~~~~~~d~~v~~~~~~~~~~~~~-~------------------------------------------------------ 92 (299)
T d1nr0a2 69 -LFTVSWDDHLKVVPAGGSGVDSS-K------------------------------------------------------ 92 (299)
T ss_dssp -EEEEETTTEEEEECSSSSSSCTT-S------------------------------------------------------
T ss_pred -eecccceeeEEEeccCCcccccc-c------------------------------------------------------
Confidence 67788899999999865411000 0
Q ss_pred cccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeeecCCC-----cCCCCccc-CC
Q psy12356 203 RHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPTHT-----KEENGQLR-DP 276 (400)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~~h~-----~~~~g~~~-~~ 276 (400)
.....+...+.+++|+|+|++++++.++.+++|+.... ......|. +.++++++ .+
T Consensus 93 ---------------~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l~~g 154 (299)
T d1nr0a2 93 ---------------AVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL---TEVPISYNSSCVALSNDKQFVAVG 154 (299)
T ss_dssp ---------------CCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEE---EEEECSSCEEEEEECTTSCEEEEE
T ss_pred ---------------cccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccc
Confidence 00012334567777888887777766777888875431 22222221 34666654 35
Q ss_pred CCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeeccc----chh-------------hccccccee
Q psy12356 277 SNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR----GIF-------------ADAHTYHIS 339 (400)
Q Consensus 277 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~----~~~-------------~~gh~~~V~ 339 (400)
+.++.+++|++...+. .......|...|++++|+|+++++++... +.| ..+|...|+
T Consensus 155 ~~dg~i~~~d~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~ 228 (299)
T d1nr0a2 155 GQDSKVHVYKLSGASV------SEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA 228 (299)
T ss_dssp ETTSEEEEEEEETTEE------EEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred cccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6677777776643221 11122358888999999999998875332 111 147999999
Q ss_pred EEEEccCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 340 STSVNSDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 340 ~i~fspDg~~las~-~D~~i~lW~~~~~~ 367 (400)
+++|+|||++||++ .|++|+|||++...
T Consensus 229 ~l~~s~~~~~l~sgs~dg~i~iwd~~~~~ 257 (299)
T d1nr0a2 229 CVSWSPDNVRLATGSLDNSVIVWNMNKPS 257 (299)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred cccccccccceEEEcCCCEEEEEECCCCC
Confidence 99999999999997 69999999998654
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=6.2e-25 Score=207.32 Aligned_cols=256 Identities=9% Similarity=0.032 Sum_probs=167.3
Q ss_pred eEEEEEECCCCCeEEEecCCC-eEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELLATGDKGG-RVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg-~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+.+++|+|+|++||.++.+. .|+.|+..... ......+.+|.. ..|++++|+|+.++.
T Consensus 19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~---------~~~~~~~~gh~~-----------~~v~~v~fsP~~~g~ 78 (325)
T d1pgua1 19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSK---------VPPVVQFTGHGS-----------SVVTTVKFSPIKGSQ 78 (325)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEECCSSCCS---------SCSEEEECTTTT-----------SCEEEEEECSSTTCC
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCC---------ccceEEEeCCCC-----------CCEEEEEEeeCCCCC
Confidence 456899999999999887554 35556644321 223456777742 359999999976444
Q ss_pred eEEEeeCCCeEEEEEccCCCc------------ccccccEEEEEEecCCCCEEEEEeC--CCeEEEEecccccccccccc
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM------------EELNEVITAAEFHPIDCNLFVYSSS--KGTIRLCDMRAAALCDRHSK 149 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~------------~~~~~~V~sv~f~p~~~~~las~s~--Dg~i~lWD~~~~~~~~~~~~ 149 (400)
.+++++.|++|+|||+..+.. ..+...|.+++|+|++ .++++++. ++.+++|+..++..+.....
T Consensus 79 ~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (325)
T d1pgua1 79 YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWDSGNSLGEVSG 157 (325)
T ss_dssp EEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETTTCCEEEECCS
T ss_pred EEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCC-CccceeeccccceEEEEeecccccceeeee
Confidence 555688999999999976541 1244679999999986 66666654 77899999988743322111
Q ss_pred eeccCcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeE
Q psy12356 150 CLIEGTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSIS 228 (400)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 228 (400)
+ ...+..+.+ .+++ ...++++.|+.+++||++..+... .+.. ..+|...|.
T Consensus 158 h-----~~~v~~~~~----------~~~~~~~~~~~~~d~~v~~~d~~~~~~~~----~~~~---------~~~~~~~v~ 209 (325)
T d1pgua1 158 H-----SQRINACHL----------KQSRPMRSMTVGDDGSVVFYQGPPFKFSA----SDRT---------HHKQGSFVR 209 (325)
T ss_dssp C-----SSCEEEEEE----------CSSSSCEEEEEETTTEEEEEETTTBEEEE----EECS---------SSCTTCCEE
T ss_pred c-----ccccccccc----------cccccceEEEeecccccccccccccccce----eccc---------ccCCCCccE
Confidence 0 011112222 2333 234455679999999987654321 1110 235678899
Q ss_pred EEEECCC-CcEEEE-ecCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceecccc
Q psy12356 229 DVKISNS-GRYMIS-RDYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAH 306 (400)
Q Consensus 229 ~v~fSpd-g~~las-~~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~ 306 (400)
+++|+|| ++++++ +.|++|++||++++ .+++.+++|..
T Consensus 210 ~v~~~pd~~~~l~s~~~d~~i~iwd~~~~-~~~~~l~~~~~--------------------------------------- 249 (325)
T d1pgua1 210 DVEFSPDSGEFVITVGSDRKISCFDGKSG-EFLKYIEDDQE--------------------------------------- 249 (325)
T ss_dssp EEEECSTTCCEEEEEETTCCEEEEETTTC-CEEEECCBTTB---------------------------------------
T ss_pred Eeeeccccceeccccccccceeeeeeccc-ccccccccccc---------------------------------------
Confidence 9999997 678886 57999999999875 35666654421
Q ss_pred ccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCeeEEEEeecC
Q psy12356 307 TYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQSFNIVDIKP 377 (400)
Q Consensus 307 ~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~~~~~~~~~~ 377 (400)
. +...+.+++| |||++|+++ .|++|+|||++.+ ++.+.+.+..
T Consensus 250 --~------------------------v~~~~~s~~~-~dg~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~~ 293 (325)
T d1pgua1 250 --P------------------------VQGGIFALSW-LDSQKFATVGADATIRVWDVTTS-KCVQKWTLDK 293 (325)
T ss_dssp --C------------------------CCSCEEEEEE-SSSSEEEEEETTSEEEEEETTTT-EEEEEEECCT
T ss_pred --c------------------------cccceeeeec-cCCCEEEEEeCCCeEEEEECCCC-CEEEEEEecC
Confidence 0 1112233444 789999997 7999999999864 4666665544
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=2.3e-24 Score=208.51 Aligned_cols=193 Identities=14% Similarity=0.133 Sum_probs=128.1
Q ss_pred eEEEEEECCC-----CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 5 MREASQRFSD-----GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 5 ~v~~v~fspd-----G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
.+.+++|+++ +.++++++.||+|++|++...................+.... .........+++++|+|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~s~d 195 (393)
T d1sq9a_ 121 SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTV-----ESPMTPSQFATSVDISER 195 (393)
T ss_dssp CEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEE-----CCSSSSCCCCCEEEECTT
T ss_pred ceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccce-----ecccCCCCcEEEEEECCC
Confidence 3556777765 578999999999999998643211000000000000000000 001112244789999987
Q ss_pred cCCceEEEeeCCCeEEEEEccCCCc----------ccccccEEEEEEecCCCCEEEEEeCCCe---EEEEeccccccccc
Q psy12356 80 KNQAHFLLSTNDQSFNIVDIKPTNM----------EELNEVITAAEFHPIDCNLFVYSSSKGT---IRLCDMRAAALCDR 146 (400)
Q Consensus 80 ~~~~~~l~ss~D~tI~lWd~~~~~~----------~~~~~~V~sv~f~p~~~~~las~s~Dg~---i~lWD~~~~~~~~~ 146 (400)
+ .+++++.|++|+|||+++++. ..|...|++++|+|++ ++|++|+.|++ |++||++++....
T Consensus 196 g---~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg-~~l~sgs~D~t~~~i~lwd~~~g~~~~- 270 (393)
T d1sq9a_ 196 G---LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG-SLLAIAHDSNSFGCITLYETEFGERIG- 270 (393)
T ss_dssp S---EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST-TEEEEEEEETTEEEEEEEETTTCCEEE-
T ss_pred C---EEEEEeCCCcEEEEeecccccccccccccccccccceEEEccccccc-ceeeeecCCCCcceeeecccccceeee-
Confidence 5 778889999999999987652 3467789999999985 79999999874 8999999883221
Q ss_pred ccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccC
Q psy12356 147 HSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISS 226 (400)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 226 (400)
.+. .. ..... ....+.+|.+.
T Consensus 271 ------~l~--------~~---------------------------------~~~~~------------~~~~~~gH~~~ 291 (393)
T d1sq9a_ 271 ------SLS--------VP---------------------------------THSSQ------------ASLGEFAHSSW 291 (393)
T ss_dssp ------EEC--------BC-----------------------------------------------------CCBSBSSC
T ss_pred ------eec--------cc---------------------------------ccccc------------ceeeeecccCc
Confidence 100 00 00000 00113489999
Q ss_pred eEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCc
Q psy12356 227 ISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTK 267 (400)
Q Consensus 227 V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~ 267 (400)
|++|+|||||++|+|+ .|++|||||++++ .+++++++|..
T Consensus 292 V~~l~fspd~~~l~S~s~D~~v~vWd~~~g-~~~~~l~gH~~ 332 (393)
T d1sq9a_ 292 VMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLNMHCD 332 (393)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCGG
T ss_pred eeeeccCCCCCeeEEECCCCEEEEEECCCC-CEEEEECCcCC
Confidence 9999999999999975 6999999999986 58999999963
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=6.4e-23 Score=190.80 Aligned_cols=237 Identities=16% Similarity=0.226 Sum_probs=157.5
Q ss_pred ceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCC
Q psy12356 46 YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDC 121 (400)
Q Consensus 46 ~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~ 121 (400)
.+..++|+||+. .|++|+|+|+++ .+++++.|++|+|||+.+++ +..|...|++++|+|++
T Consensus 45 ~~~~~tL~GH~~------------~I~~l~~s~~~~--~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~- 109 (340)
T d1tbga_ 45 MRTRRTLRGHLA------------KIYAMHWGTDSR--LLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG- 109 (340)
T ss_dssp CCEEEEECCCSS------------CEEEEEECTTSS--EEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTS-
T ss_pred eeeeEEECCCCC------------CEEEEEECCCCC--EEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccc-
Confidence 456788999984 599999999874 77788999999999999886 34567889999999985
Q ss_pred CEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccccccc
Q psy12356 122 NLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALC 201 (400)
Q Consensus 122 ~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~ 201 (400)
.++++++.|+++++|+.............+........ . ..............|...+.|+.......
T Consensus 110 ~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (340)
T d1tbga_ 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS-C-----------CRFLDDNQIVTSSGDTTCALWDIETGQQT 177 (340)
T ss_dssp SEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEE-E-----------EEEEETTEEEEEETTTEEEEEETTTTEEE
T ss_pred eeeeeecccceeecccccccccccccceeccccccccc-c-----------ccccccccccccccccccccccccccccc
Confidence 79999999999999998776321110000100000000 0 00001111222235677777766543221
Q ss_pred CcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCc
Q psy12356 202 DRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNIT 280 (400)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~ 280 (400)
. ....+...+....+.|++.+++++ .|++|++||++++ .++.++.+|.
T Consensus 178 ~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~-~~~~~~~~h~-------------- 226 (340)
T d1tbga_ 178 T----------------TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-MCRQTFTGHE-------------- 226 (340)
T ss_dssp E----------------EEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTT-EEEEEECCCS--------------
T ss_pred c----------------cccccceeEeeeccccccceeEEeecCceEEEEECCCC-cEEEEEeCCC--------------
Confidence 0 012344678899999999998875 6899999999975 4666676653
Q ss_pred eeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccc---------------hh-hcccccceeEEEEc
Q psy12356 281 ALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRG---------------IF-ADAHTYHISSTSVN 344 (400)
Q Consensus 281 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~---------------~~-~~gh~~~V~~i~fs 344 (400)
..|++++|+|||+++++++.. .+ ...|...|.+++|+
T Consensus 227 ---------------------------~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 279 (340)
T d1tbga_ 227 ---------------------------SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp ---------------------------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred ---------------------------CCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEEC
Confidence 234444455555444432110 00 13567789999999
Q ss_pred cCCCEEEEe-cCCeEEEEeCccCC
Q psy12356 345 SDQETYLSA-DDLRINLWHLEITD 367 (400)
Q Consensus 345 pDg~~las~-~D~~i~lW~~~~~~ 367 (400)
|+|++|+++ .|++|++||+...+
T Consensus 280 ~~~~~l~~g~~dg~i~iwd~~~~~ 303 (340)
T d1tbga_ 280 KSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCC
T ss_pred CCCCEEEEEECCCEEEEEECCCCc
Confidence 999999997 69999999998644
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.92 E-value=7.3e-24 Score=194.10 Aligned_cols=235 Identities=12% Similarity=0.160 Sum_probs=165.7
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|+|+|.++++++.++++.+|+..... ....+.+|. ..+.++.|+|+++
T Consensus 60 ~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~------------~~~~~~~~~~~~~-- 114 (317)
T d1vyhc1 60 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-----------CIRTMHGHD------------HNVSSVSIMPNGD-- 114 (317)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSSC-----------EEECCCCCS------------SCEEEEEECSSSS--
T ss_pred CcEEEEeeecccccccccccccccccccccccc-----------ccccccccc------------ccceeeeccCCCc--
Confidence 458999999999999999999999999987532 233455665 3478899999864
Q ss_pred eEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++++.|+.+++||+++++. ..+...+.+++|+|++ ++|++++.|+.|++||++++........+. ..+
T Consensus 115 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~-----~~i 188 (317)
T d1vyhc1 115 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHR-----HVV 188 (317)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCS-----SCE
T ss_pred eEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCC-CEEEEEeCCCeEEEEeeccceeeEEEecCC-----CCc
Confidence 677889999999999988762 4466789999999985 799999999999999999875422111000 001
Q ss_pred eceeccCchhh----------hhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEE
Q psy12356 160 QGLIVPESKRE----------ERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISD 229 (400)
Q Consensus 160 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 229 (400)
..+.+.+.... .......+....+++.|+.|++||++++... .. +.+|...|.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~----~~------------~~~~~~~v~~ 252 (317)
T d1vyhc1 189 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL----MT------------LVGHDNWVRG 252 (317)
T ss_dssp EEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE----EE------------EECCSSCEEE
T ss_pred eEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEE----EE------------EeCCCCCEEE
Confidence 11111110000 0011122333455668999999999876532 11 3467789999
Q ss_pred EEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc-CCCCCceeecCc
Q psy12356 230 VKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR-DPSNITALRVPQ 286 (400)
Q Consensus 230 v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~-~~~~~~~i~l~~ 286 (400)
++|+|+|++|+++ .|++|+|||++++ .+++++.+|. +.++|+++ +++.|++|++|+
T Consensus 253 ~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 253 VLFHSGGKFILSCADDKTLRVWDYKNK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp EEECSSSSCEEEEETTTEEEEECCTTS-CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEECCCCCEEEEEECCCeEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 9999999999874 6899999999986 4789999985 45666653 456667777663
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=1e-22 Score=189.66 Aligned_cols=277 Identities=15% Similarity=0.227 Sum_probs=172.5
Q ss_pred eeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCCCEE
Q psy12356 49 YSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDCNLF 124 (400)
Q Consensus 49 ~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~~~l 124 (400)
..+|+||... -+++++| +++ .+++++.|++|+|||+.+++ ++.|...|++++|+|+ ++|
T Consensus 5 ~~tL~GH~~~-----------vitc~~~--~~~--~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~--~~l 67 (355)
T d1nexb2 5 RTTLRGHMTS-----------VITCLQF--EDN--YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG--GIL 67 (355)
T ss_dssp EEEEECCSSS-----------CEEEEEE--ETT--EEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT--TEE
T ss_pred cEEECCcCCC-----------cEEEEEE--CCC--EEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC--CEE
Confidence 3578999743 2466655 443 77788999999999999887 3567889999999995 489
Q ss_pred EEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcc
Q psy12356 125 VYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRH 204 (400)
Q Consensus 125 as~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~ 204 (400)
++++.|++|++|++........... ......... ....++....+.++.|+.|++||++........
T Consensus 68 ~s~s~D~~i~iw~~~~~~~~~~~~~---~~~~~~~~~----------~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~ 134 (355)
T d1nexb2 68 VSGSTDRTVRVWDIKKGCCTHVFEG---HNSTVRCLD----------IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDH 134 (355)
T ss_dssp EEEETTCCEEEEETTTTEEEEEECC---CSSCEEEEE----------EEEETTEEEEEEEETTSEEEEEECCC-------
T ss_pred EEEeccccccccccccccccccccc---ccccccccc----------cccccccceeeeecCCCcEEEEEccCCceeccc
Confidence 9999999999999988743211000 000000000 011234445566678999999999875432110
Q ss_pred ccc------ccCCC-CCCCcccccccccCeEEEEECCCCcEEEE-ecCCeEEEEeCCCCCCceeeecCCC-------cCC
Q psy12356 205 SKF------FEEPE-DPTNKSFFSEIISSISDVKISNSGRYMIS-RDYLCVKVWDLHMESRPVETYPTHT-------KEE 269 (400)
Q Consensus 205 ~~~------~~~~~-~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD~~~~~~~l~~~~~h~-------~~~ 269 (400)
... ...+. ..........|...+ ..+.+++++++. ..|+.|++||++++ ..+..+.++. +.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~ 211 (355)
T d1nexb2 135 GEEHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYDNTLIVWDVAQM-KCLYILSGHTDRIYSTIYDH 211 (355)
T ss_dssp ----CCCEEESCTTTCTTEEEEEECCSSCE--EEEEEETTEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEEET
T ss_pred cccceeccceeccccccceeeeeeeccccc--cccccccceeeeecccceeeeeecccc-cceeeeeccccccccccccc
Confidence 000 00000 000000112233344 456678888886 47899999999976 3566666653 345
Q ss_pred CCccc-CCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeeccc----chh--------hccccc
Q psy12356 270 NGQLR-DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR----GIF--------ADAHTY 336 (400)
Q Consensus 270 ~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~----~~~--------~~gh~~ 336 (400)
++.++ .++.++++++|++...... .. ..+|...|.+++++| +++++++. ++| ..+|..
T Consensus 212 ~~~~~~~~~~d~~i~i~d~~~~~~~------~~-~~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 282 (355)
T d1nexb2 212 ERKRCISASMDTTIRIWDLENGELM------YT-LQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKFSYHHT 282 (355)
T ss_dssp TTTEEEEEETTSCEEEEETTTCCEE------EE-ECCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTCCEEEEEECT
T ss_pred cceeeecccccceEEeeeccccccc------cc-ccccccccccccccc--ceeeeeecccccccccccccceecccccC
Confidence 66654 4677889999987543221 12 357888999999875 45554332 111 136666
Q ss_pred ceeEE-EEccCCCEEEEecCCeEEEEeCccCC
Q psy12356 337 HISST-SVNSDQETYLSADDLRINLWHLEITD 367 (400)
Q Consensus 337 ~V~~i-~fspDg~~las~~D~~i~lW~~~~~~ 367 (400)
.+.++ +|+|++++|+++.|++|+|||+++++
T Consensus 283 ~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg~ 314 (355)
T d1nexb2 283 NLSAITTFYVSDNILVSGSENQFNIYNLRSGK 314 (355)
T ss_dssp TCCCCCEEEECSSEEEEEETTEEEEEETTTCC
T ss_pred CceEEEEEcCCCCEEEEEeCCEEEEEECCCCC
Confidence 66665 56888888888889999999998644
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.90 E-value=4.7e-22 Score=194.46 Aligned_cols=320 Identities=9% Similarity=-0.016 Sum_probs=184.6
Q ss_pred EECCCCC--eEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE
Q psy12356 10 QRFSDGE--LLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL 87 (400)
Q Consensus 10 ~fspdG~--~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ 87 (400)
.+++|.+ ++++++.||+|+|||+.++ ++++++..|. .+..|+|+||++ ++++
T Consensus 25 ~~~~d~~~~~~V~~~~dg~v~vwD~~t~-----------~~~~~l~~g~-------------~~~~vafSPDGk--~l~~ 78 (426)
T d1hzua2 25 LNDLDLPNLFSVTLRDAGQIALVDGDSK-----------KIVKVIDTGY-------------AVHISRMSASGR--YLLV 78 (426)
T ss_dssp CSCCCGGGEEEEEETTTTEEEEEETTTC-----------SEEEEEECCS-------------SEEEEEECTTSC--EEEE
T ss_pred cccCCCCeEEEEEEcCCCEEEEEECCCC-----------cEEEEEeCCC-------------CeeEEEECCCCC--EEEE
Confidence 3555544 5688999999999999864 4567787764 278899999984 6667
Q ss_pred eeCCCeEEEEEccCCCcc---------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccc
Q psy12356 88 STNDQSFNIVDIKPTNME---------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCN 158 (400)
Q Consensus 88 ss~D~tI~lWd~~~~~~~---------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 158 (400)
++.|++|++||+++++.. .+...+.+++|+|||..+++++..++++++||..++............
T Consensus 79 ~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~----- 153 (426)
T d1hzua2 79 IGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT----- 153 (426)
T ss_dssp EETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC-----
T ss_pred EeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCC-----
Confidence 888999999999887621 234556788899997555566678999999999988543211110000
Q ss_pred eeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 159 CQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
.....+ .+++ ......+.|+...+|....... +..+.......+......+...+..++|+|+|+
T Consensus 154 ~~~~~~----------~~~~~~~~i~~s~d~~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (426)
T d1hzua2 154 VDTQTY----------HPEPRVAAIIASHEHPEFIVNVKETGK----VLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHR 219 (426)
T ss_dssp SSSCCE----------ESCCCEEEEEECSSSSEEEEEETTTTE----EEEEECSSSSSCEEEEEECCSSEEEEEECTTSC
T ss_pred ccceee----------cCCCceeEEEECCCCCEEEEecCCCCe----EEEEEeccccceeeEEeccCCccEeeeECCCCc
Confidence 000000 0111 1111122333333333221110 000000000001111124556788999999999
Q ss_pred EEEEe--cCCeEEEEeCCCCCCceeeecCCCcC-----------CCCccc--CCCCCceeecCcccccceee-ccCccce
Q psy12356 238 YMISR--DYLCVKVWDLHMESRPVETYPTHTKE-----------ENGQLR--DPSNITALRVPQIKPIELTV-EASPRRI 301 (400)
Q Consensus 238 ~las~--~D~tIklWD~~~~~~~l~~~~~h~~~-----------~~g~~~--~~~~~~~i~l~~~~~~~~~~-~~~~~~~ 301 (400)
++..+ .+..+.+||..++. .+..+...... ..+... ..+.++.+.+|......... ..+..+.
T Consensus 220 ~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~ 298 (426)
T d1hzua2 220 YFMTAANNSNKVAVIDSKDRR-LSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 298 (426)
T ss_dssp EEEEEETTCSEEEEEETTTTE-EEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEEeeeecccceeeeeccccc-EEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEE
Confidence 88753 46899999999863 34443321100 011111 23344555444332211100 0111122
Q ss_pred eccccccceEEEEEcCCCcEEeecc-----------cchh-------------------hcccccceeEEEEccCCCEE-
Q psy12356 302 FANAHTYHINSISVNSDQLTVEASP-----------RGIF-------------------ADAHTYHISSTSVNSDQETY- 350 (400)
Q Consensus 302 ~~~~~~~~i~~i~~s~dg~~~~~~~-----------~~~~-------------------~~gh~~~V~~i~fspDg~~l- 350 (400)
..+|...+++++|+|||++++... .+++ ...|...|.+++|||||+++
T Consensus 299 -l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~ 377 (426)
T d1hzua2 299 -LQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 377 (426)
T ss_dssp -EECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEE
T ss_pred -EecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEE
Confidence 247888899999999999987311 0111 01456679999999999976
Q ss_pred EEe-----cCCeEEEEeCccCCeeEEEEeecC
Q psy12356 351 LSA-----DDLRINLWHLEITDQSFNIVDIKP 377 (400)
Q Consensus 351 as~-----~D~~i~lW~~~~~~~~~~~~~~~~ 377 (400)
+|+ .|++|+|||..+.+ ..+++.-+|
T Consensus 378 vs~~~~~~~~~~i~v~D~~T~k-~~~~i~~~~ 408 (426)
T d1hzua2 378 FSVWNGKNDSSALVVVDDKTLK-LKAVVKDPR 408 (426)
T ss_dssp EEECCCTTSCCEEEEEETTTTE-EEEEECCTT
T ss_pred EEEecCCCCCCeEEEEECCCCe-EEEEECCCC
Confidence 342 37889999998754 455665554
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.87 E-value=8.1e-21 Score=186.62 Aligned_cols=197 Identities=14% Similarity=0.052 Sum_probs=127.9
Q ss_pred CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCe
Q psy12356 14 DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQS 93 (400)
Q Consensus 14 dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~t 93 (400)
+.-++++.+.||+|.|||..++ ++++++..|. .+..++||||++ .+++++.|++
T Consensus 31 ~~~~~v~~~d~g~v~v~D~~t~-----------~v~~~~~~g~-------------~~~~v~fSpDG~--~l~~~s~dg~ 84 (432)
T d1qksa2 31 ENLFSVTLRDAGQIALIDGSTY-----------EIKTVLDTGY-------------AVHISRLSASGR--YLFVIGRDGK 84 (432)
T ss_dssp GGEEEEEETTTTEEEEEETTTC-----------CEEEEEECSS-------------CEEEEEECTTSC--EEEEEETTSE
T ss_pred CcEEEEEEcCCCEEEEEECCCC-----------cEEEEEeCCC-------------CeeEEEECCCCC--EEEEEcCCCC
Confidence 3344689999999999999864 4567776653 378999999984 6667888999
Q ss_pred EEEEEccCCCcc---------cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceec
Q psy12356 94 FNIVDIKPTNME---------ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIV 164 (400)
Q Consensus 94 I~lWd~~~~~~~---------~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (400)
|++||+.+++.. .+.+.+.+..|+|||..++++++.+++|++||..++.........-....... ..
T Consensus 85 v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~----~~ 160 (432)
T d1qksa2 85 VNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQE----YH 160 (432)
T ss_dssp EEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCC----EE
T ss_pred EEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCcccccee----cc
Confidence 999999877521 23345677788898755668888999999999998854322111000000000 00
Q ss_pred cCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-e
Q psy12356 165 PESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-R 242 (400)
Q Consensus 165 ~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~ 242 (400)
+.+....+..++++ ....+...++.|.+||....... +... ..+......++|+|||++++. +
T Consensus 161 ~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~----~~~~-----------i~~g~~~~~~~~spdg~~~~va~ 225 (432)
T d1qksa2 161 PEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL----KTTE-----------ISAERFLHDGGLDGSHRYFITAA 225 (432)
T ss_dssp SCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE----EEEE-----------EECCSSEEEEEECTTSCEEEEEE
T ss_pred CCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcc----eEEE-----------EcccCccccceECCCCCEEEEec
Confidence 00111112233444 33445567899999998754321 1110 022345788999999998764 3
Q ss_pred -cCCeEEEEeCCCC
Q psy12356 243 -DYLCVKVWDLHME 255 (400)
Q Consensus 243 -~D~tIklWD~~~~ 255 (400)
.++.+.+||..+.
T Consensus 226 ~~~~~v~v~d~~~~ 239 (432)
T d1qksa2 226 NARNKLVVIDTKEG 239 (432)
T ss_dssp GGGTEEEEEETTTT
T ss_pred cccceEEEeecccc
Confidence 4689999999875
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=2e-20 Score=173.04 Aligned_cols=262 Identities=13% Similarity=0.193 Sum_probs=166.3
Q ss_pred ceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC----cccccccEEEEEEecCCC
Q psy12356 46 YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN----MEELNEVITAAEFHPIDC 121 (400)
Q Consensus 46 ~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~----~~~~~~~V~sv~f~p~~~ 121 (400)
+++.++++||+.. |.+ +++++++ .+++++.|++|+|||+.+++ +..|...|.+++|+|+
T Consensus 6 ~~~~~~l~GH~~~------------V~s-~~~~~g~--~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~-- 68 (342)
T d2ovrb2 6 LKSPKVLKGHDDH------------VIT-CLQFCGN--RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-- 68 (342)
T ss_dssp CCCCEEEECSTTS------------CEE-EEEEETT--EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--
T ss_pred CCcCEEECCcCCc------------eEE-EEEECCC--EEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--
Confidence 3456789999843 543 3556654 77888999999999999887 3567889999999973
Q ss_pred CEEEEEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeeccccccc
Q psy12356 122 NLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALC 201 (400)
Q Consensus 122 ~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~ 201 (400)
+|++++.|+++++|+............ ........ .........+..|+.+.+||.+++...
T Consensus 69 -~l~s~s~D~~~~~~~~~~~~~~~~~~~-----~~~~~~~~------------~~~~~~~~~~~~d~~i~~~~~~~~~~~ 130 (342)
T d2ovrb2 69 -IIISGSTDRTLKVWNAETGECIHTLYG-----HTSTVRCM------------HLHEKRVVSGSRDATLRVWDIETGQCL 130 (342)
T ss_dssp -EEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEE------------EEETTEEEEEETTSEEEEEESSSCCEE
T ss_pred -ccccceecccccccccccccceecccc-----cceeEeee------------ecccccccccccceeEEEeecccccce
Confidence 899999999999999887643211000 00000000 001111223346899999999876432
Q ss_pred CcccccccCCCCCCCcccccccccCeEEEEECCCCcEE-EEecCCeEEEEeCCCCCCceeeecCCCc-----CCCCcc-c
Q psy12356 202 DRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYM-ISRDYLCVKVWDLHMESRPVETYPTHTK-----EENGQL-R 274 (400)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~l-as~~D~tIklWD~~~~~~~l~~~~~h~~-----~~~g~~-~ 274 (400)
. .+. .+ .... ..+.+...++ .++.|++|++||.+.. .++..+.+|.. ..++.+ +
T Consensus 131 ~----~~~------------~~-~~~~-~~~~~~~~~~~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 191 (342)
T d2ovrb2 131 H----VLM------------GH-VAAV-RCVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQFDGIHVV 191 (342)
T ss_dssp E----EEE------------CC-SSCE-EEEEECSSCEEEEETTSCEEEEEGGGT-EEEEEECCCSSCEEEEEECSSEEE
T ss_pred e----eee------------cc-cccc-eeeccccceeeeecCCCeEEEeecccc-eeeEEEcCcccccccccCCCCEEE
Confidence 1 110 11 1122 2333444444 4578999999999975 46778888852 345665 4
Q ss_pred CCCCCceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeeccc----chh-------------hcccccc
Q psy12356 275 DPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR----GIF-------------ADAHTYH 337 (400)
Q Consensus 275 ~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~----~~~-------------~~gh~~~ 337 (400)
+++.++.+++|++...... +. ..+|...+.++++++ +++++.+. ++| ...|...
T Consensus 192 s~~~dg~i~~~d~~~~~~~------~~-~~~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 262 (342)
T d2ovrb2 192 SGSLDTSIRVWDVETGNCI------HT-LTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 262 (342)
T ss_dssp EEETTSCEEEEETTTCCEE------EE-ECCCCSCEEEEEEET--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSC
T ss_pred EEeCCCeEEEeecccceee------eE-ecccccceeEEecCC--CEEEEEcCCCEEEEEecccccccccccccceeeec
Confidence 5788999999987544321 22 246777788777654 46664332 111 1246667
Q ss_pred eeEEEEccCCCEEEEe-cCCeEEEEeCccCCeeEEEE
Q psy12356 338 ISSTSVNSDQETYLSA-DDLRINLWHLEITDQSFNIV 373 (400)
Q Consensus 338 V~~i~fspDg~~las~-~D~~i~lW~~~~~~~~~~~~ 373 (400)
+.+++|+ +++++++ .|++|+|||+++++ +.+.+
T Consensus 263 ~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~-~i~~~ 296 (342)
T d2ovrb2 263 VTCLQFN--KNFVITSSDDGTVKLWDLKTGE-FIRNL 296 (342)
T ss_dssp EEEEEEC--SSEEEEEETTSEEEEEETTTCC-EEEEE
T ss_pred eeecccC--CCeeEEEcCCCEEEEEECCCCC-EEEEE
Confidence 7666665 5688987 79999999998755 44433
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=2.3e-21 Score=177.77 Aligned_cols=222 Identities=9% Similarity=0.058 Sum_probs=146.4
Q ss_pred ceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCcccccccEEEEEEecCCCCEEE
Q psy12356 46 YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFV 125 (400)
Q Consensus 46 ~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~~~~~~V~sv~f~p~~~~~la 125 (400)
.+++++++||.. .|++|+|+| +++++.|++|++||+.++. +.|...|.+++|++. ..++
T Consensus 3 ~~~i~~l~gH~~------------~I~~l~~s~------l~sgs~Dg~v~~Wd~~~~~-~~h~~~V~~~~~~~~--~~~~ 61 (287)
T d1pgua2 3 DEVLKTISGHNK------------GITALTVNP------LISGSYDGRIMEWSSSSMH-QDHSNLIVSLDNSKA--QEYS 61 (287)
T ss_dssp EEEEEEECCCSS------------CEEEEETTT------TEEEETTSCEEETTTTEEE-CCCCSCEEEEECCST--TCCE
T ss_pred cceeEEECCCCC------------ceEEEEECc------EEEEeCCCeEEEEECCCCC-CCCCCCEEEEEecCC--CeEE
Confidence 467889999984 599999964 8899999999999987643 467788999999985 4689
Q ss_pred EEeCCCeEEEEecccccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCccc
Q psy12356 126 YSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHS 205 (400)
Q Consensus 126 s~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~ 205 (400)
+++.|+++++||+....... .. ..+ ...+++.....+ .++.+.+|+...+....
T Consensus 62 s~s~D~~v~~w~~~~~~~~~----~~--------~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--- 115 (287)
T d1pgua2 62 SISWDDTLKVNGITKHEFGS----QP--------KVA----------SANNDGFTAVLT-NDDDLLILQSFTGDIIK--- 115 (287)
T ss_dssp EEETTTEEEETTEEEEECSS----CE--------EEE----------EECSSSEEEEEE-TTSEEEEEETTTCCEEE---
T ss_pred EEeecccccccccccccccc----ce--------eee----------eeccCCceEEEe-ecccceeeeccceeeee---
Confidence 99999999999987763210 00 000 011222222222 35567777766543210
Q ss_pred ccccCCCCCCCcccccccccCeEEEEECCCCcEEEE-ec-CCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceee
Q psy12356 206 KFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS-RD-YLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALR 283 (400)
Q Consensus 206 ~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las-~~-D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~ 283 (400)
...+. ....+++|++..++. +. ++.|++|++.... ....+
T Consensus 116 --------------~~~~~--~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~-~~~~~--------------------- 157 (287)
T d1pgua2 116 --------------SVRLN--SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLE-VSFDL--------------------- 157 (287)
T ss_dssp --------------EEECS--SCEEEEEECSSEEEEEETTTSCEEEEETTEEE-EEEEC---------------------
T ss_pred --------------ecccc--ceeeeeeccCcceeeeccccceeeeeeccccc-eeeee---------------------
Confidence 01333 334567777777663 44 4688999886421 11111
Q ss_pred cCcccccceeeccCccceeccccccceEEEEEcCCCcEEeeccc----chh-----------hcccccceeEEEEccC--
Q psy12356 284 VPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPR----GIF-----------ADAHTYHISSTSVNSD-- 346 (400)
Q Consensus 284 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~----~~~-----------~~gh~~~V~~i~fspD-- 346 (400)
...|...+.+++|+|||++|++... ++| ..+|...|++++|+|+
T Consensus 158 -------------------~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 218 (287)
T d1pgua2 158 -------------------KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEK 218 (287)
T ss_dssp -------------------SSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC-
T ss_pred -------------------eeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeeccccc
Confidence 1234556788999999988875431 111 1489999999999875
Q ss_pred --------CCEEEEe-cCCeEEEEeCccCCeeEE
Q psy12356 347 --------QETYLSA-DDLRINLWHLEITDQSFN 371 (400)
Q Consensus 347 --------g~~las~-~D~~i~lW~~~~~~~~~~ 371 (400)
+++|||+ .|++|+||+++.+.+.+.
T Consensus 219 ~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~ 252 (287)
T d1pgua2 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK 252 (287)
T ss_dssp -----CCSCCEEEEEETTSCEEEEESSCTTCCEE
T ss_pred ccccccCCCCeeEeecCCCeEEEEECCCCCeEEE
Confidence 4689997 699999999976554443
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=3.6e-20 Score=170.66 Aligned_cols=221 Identities=5% Similarity=-0.002 Sum_probs=130.1
Q ss_pred eeEEEEEECCC-CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSD-GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspd-G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
..|.+|+|+|+ +.+|++|+.||+|++|+...... ......+... ......+.++.
T Consensus 57 ~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~-----------~~~~~~~~~~-----------~~~~~~~~~~~-- 112 (342)
T d1yfqa_ 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS-----------FQALTNNEAN-----------LGICRICKYGD-- 112 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS-----------EEECBSCCCC-----------SCEEEEEEETT--
T ss_pred CCEEEEEEeCCCCCEEEEcccccceeeeecccccc-----------cccccccccc-----------ccccccccccc--
Confidence 45899999986 56899999999999999875421 1122222211 12233444443
Q ss_pred ceEEEeeCCCeEEEEEccCCCcc--------c--ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceec
Q psy12356 83 AHFLLSTNDQSFNIVDIKPTNME--------E--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLI 152 (400)
Q Consensus 83 ~~~l~ss~D~tI~lWd~~~~~~~--------~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~ 152 (400)
..+++++.|+++++||++.+... . .........+.+. ...+++++.|+.|++||++.......... ..
T Consensus 113 ~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-~~ 190 (342)
T d1yfqa_ 113 DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN-SSRLIVGMNNSQVQWFRLPLCEDDNGTIE-ES 190 (342)
T ss_dssp TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC-SSEEEEEESTTEEEEEESSCCTTCCCEEE-EC
T ss_pred ccccccccccccceeeccccccceeeecccccccccceeeeeeeecc-CCceeeecCCCcEEEEecccCcccceeee-ec
Confidence 36777899999999998654311 0 1122344566665 46899999999999999987743211000 00
Q ss_pred cCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 153 EGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
.... ...... ....+....+.++.||.+.+|+.................... ......+|...|++|+|
T Consensus 191 ~~~~-~~~~~~---------~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~l~~ 259 (342)
T d1yfqa_ 191 GLKY-QIRDVA---------LLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR-LNLKDTNLAYPVNSIEF 259 (342)
T ss_dssp SCSS-CEEEEE---------ECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCC-CCTTCCSSCCCEEEEEE
T ss_pred cccc-ceeeeE---------eecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeee-eccCCCcccccceeEEe
Confidence 0000 000000 011233334555679999999987543221110100000000 00112356778999999
Q ss_pred CCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 233 SNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 233 Spdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
||++++||++ .|++|+|||++++. +++++
T Consensus 260 sp~~~~lasg~~Dg~v~vWD~~~~~-~l~~~ 289 (342)
T d1yfqa_ 260 SPRHKFLYTAGSDGIISCWNLQTRK-KIKNF 289 (342)
T ss_dssp CTTTCCEEEEETTSCEEEEETTTTE-EEEEC
T ss_pred cCCccEEEEECCCCEEEEEECCCCc-EEEEe
Confidence 9999999975 69999999999753 44443
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.81 E-value=9.9e-19 Score=162.65 Aligned_cols=274 Identities=5% Similarity=-0.020 Sum_probs=154.3
Q ss_pred EEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE-
Q psy12356 9 SQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL- 87 (400)
Q Consensus 9 v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~- 87 (400)
++|+++|++||+++.|++|.|||+.++ +++++++.+.. ..+..++|+||+. .+++
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~-----------~~~~t~~~~~~-----------~~p~~l~~spDG~--~l~v~ 57 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASD-----------TVYKSCVMPDK-----------FGPGTAMMAPDNR--TAYVL 57 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTT-----------EEEEEEECSSC-----------CSSCEEEECTTSS--EEEEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCC-----------CEEEEEEcCCC-----------CCcceEEECCCCC--EEEEE
Confidence 579999999999999999999999853 45666653211 2367899999874 4444
Q ss_pred eeCCCeEEEEEccCCCcc-c---------ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccc
Q psy12356 88 STNDQSFNIVDIKPTNME-E---------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNC 157 (400)
Q Consensus 88 ss~D~tI~lWd~~~~~~~-~---------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~ 157 (400)
++.+++|++||+.+++.. . +...+..++|+||| ++++.++.+.....|...
T Consensus 58 ~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG-~~l~v~~~~~~~~~~~~~------------------ 118 (346)
T d1jmxb_ 58 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYV------------------ 118 (346)
T ss_dssp ETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEE------------------
T ss_pred ECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCC-CEEEEEecCCcceeeeec------------------
Confidence 457999999999987621 0 11234578999986 455444322111110000
Q ss_pred ceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCc
Q psy12356 158 NCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGR 237 (400)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~ 237 (400)
..++.+++||..++..... +... .....+..+.++++++
T Consensus 119 ---------------------------~~~~~i~~~~~~~~~~~~~-~~~~-------------~~~~~~~~~~~~~~~~ 157 (346)
T d1jmxb_ 119 ---------------------------VKPPRLEVFSTADGLEAKP-VRTF-------------PMPRQVYLMRAADDGS 157 (346)
T ss_dssp ---------------------------ECCCEEEEEEGGGGGGBCC-SEEE-------------ECCSSCCCEEECTTSC
T ss_pred ---------------------------cCcceEEEEecccceeeeE-EEee-------------eccCceEEEEecCCCE
Confidence 0234555555554332110 0000 0012344456666776
Q ss_pred EEEEecCCeEEEEeCCCCCCceeeecCCC------cCCCCccc--CCCCCc-------------------------eeec
Q psy12356 238 YMISRDYLCVKVWDLHMESRPVETYPTHT------KEENGQLR--DPSNIT-------------------------ALRV 284 (400)
Q Consensus 238 ~las~~D~tIklWD~~~~~~~l~~~~~h~------~~~~g~~~--~~~~~~-------------------------~i~l 284 (400)
+++++ ..+.+||+.++. .+..+..|. +.+++..+ ...... .+.+
T Consensus 158 ~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (346)
T d1jmxb_ 158 LYVAG--PDIYKMDVKTGK-YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 234 (346)
T ss_dssp EEEES--SSEEEECTTTCC-EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred EEEeC--CcceEEEccCCC-EEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEE
Confidence 66543 346677776643 444444332 22333321 111111 2222
Q ss_pred CcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccc---hh---------hcccccceeEEEEccCCCEEEE
Q psy12356 285 PQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRG---IF---------ADAHTYHISSTSVNSDQETYLS 352 (400)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~---~~---------~~gh~~~V~~i~fspDg~~las 352 (400)
|+.... ........+|...+..+.++|++.+++..... .+ ...+...+.+++|||||++|++
T Consensus 235 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~va~s~DG~~l~v 308 (346)
T d1jmxb_ 235 VDLKTG------KTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYL 308 (346)
T ss_dssp EETTTC------CEEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEE
T ss_pred EECCCC------ceEEEEeecccceeEEEEEeCCCCEEEEecCCeEEEEECCCCcEEEEEcCCCCEEEEEEcCCCCEEEE
Confidence 222111 11111223466678888899887666532210 11 0123456889999999999999
Q ss_pred e-cCCeEEEEeCccCCeeEEEEeec
Q psy12356 353 A-DDLRINLWHLEITDQSFNIVDIK 376 (400)
Q Consensus 353 ~-~D~~i~lW~~~~~~~~~~~~~~~ 376 (400)
+ .|++|++||+++.+ ....+++.
T Consensus 309 ~~~d~~v~v~D~~t~~-~i~~i~~p 332 (346)
T d1jmxb_ 309 GGTFNDLAVFNPDTLE-KVKNIKLP 332 (346)
T ss_dssp ESBSSEEEEEETTTTE-EEEEEECS
T ss_pred EeCCCcEEEEECccCC-EEEEEECC
Confidence 7 69999999998644 56666654
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.2e-18 Score=157.31 Aligned_cols=213 Identities=13% Similarity=0.088 Sum_probs=125.3
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcce----------ee--------eeee--ccCcchhhcc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYN----------VY--------STFQ--SHEPEFDYLK 63 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~----------~~--------~~~~--~h~~~~~~~~ 63 (400)
..|.+|+| |+++||||+.||+|++|++..+............ .. ..+. ..........
T Consensus 56 ~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (293)
T d1p22a2 56 GSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRV 133 (293)
T ss_dssp SCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEE
T ss_pred CCEeeeec--ccceeecccccccccccccccccccccccccccccccccccccceeecccccceeEeecccccccccccc
Confidence 35777776 7889999999999999998765321100000000 00 0000 0000000000
Q ss_pred cccccceeeEEEEEeccCCceEEEeeCCCeEEEEEccCCCc----ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecc
Q psy12356 64 SLEIEEKINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNM----EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMR 139 (400)
Q Consensus 64 ~~~~~~~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~----~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~ 139 (400)
...+...|..+.+.+. .+++++.|++|++||+.+++. ..+...|..+.+++ ..+++++.|++|++||++
T Consensus 134 ~~~~~~~v~~~~~~~~----~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~ 206 (293)
T d1p22a2 134 LVGHRAAVNVVDFDDK----YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIE 206 (293)
T ss_dssp ECCCSSCEEEEEEETT----EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET---TEEEEEETTSCEEEEETT
T ss_pred ccccccccccceeccc----ccccccCCCceeeecCCCCcEEEEEcccccccccccCCC---CeEEEecCCCEEEEEecc
Confidence 0112233555555432 567788999999999988873 33455677777765 478999999999999999
Q ss_pred cccccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccc
Q psy12356 140 AAALCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSF 219 (400)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
+.........+. ..+. ....+....++++.||.|++||++........ ........
T Consensus 207 ~~~~~~~~~~~~-----~~v~------------~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-------~~~~~~~~ 262 (293)
T d1p22a2 207 CGACLRVLEGHE-----ELVR------------CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAP-------AGTLCLRT 262 (293)
T ss_dssp TCCEEEEECCCS-----SCEE------------EEECCSSEEEEEETTSCEEEEEHHHHTSTTSC-------TTTTEEEE
T ss_pred cceeeeeecccc-----eeee------------eccccceEEEEEcCCCEEEEEECCCCcccccc-------CCceeeEE
Confidence 884432111100 0000 01123334556678999999999865432110 00011122
Q ss_pred ccccccCeEEEEECCCCcEEEE-ecCCeEEEEe
Q psy12356 220 FSEIISSISDVKISNSGRYMIS-RDYLCVKVWD 251 (400)
Q Consensus 220 ~~~h~~~V~~v~fSpdg~~las-~~D~tIklWD 251 (400)
+.+|.+.|.+|+|+ +++|+| +.|++|+|||
T Consensus 263 ~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 263 LVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp ECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred ecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence 56899999999995 567886 4699999998
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.80 E-value=2.2e-17 Score=150.65 Aligned_cols=240 Identities=11% Similarity=0.131 Sum_probs=156.0
Q ss_pred eEEEEEECCCCCeE-EEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELL-ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~L-as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+..++|||||++| ++++.+++|++||+.+. +.++++..|. .+..++|++++.
T Consensus 33 ~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~-----------~~~~~~~~~~-------------~~~~~~~~~~~~-- 86 (301)
T d1l0qa2 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATN-----------NVIATVPAGS-------------SPQGVAVSPDGK-- 86 (301)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-----------EEEEEEECSS-------------SEEEEEECTTSS--
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCC-----------ceeeeeeccc-------------cccccccccccc--
Confidence 46789999999987 57778999999999753 3455666654 267789998763
Q ss_pred eEEE-eeCCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccce
Q psy12356 84 HFLL-STNDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNC 159 (400)
Q Consensus 84 ~~l~-ss~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
.+++ +..++.+++||..+++.. ........+.|+|++..+++++..++.+.+|+..+......... . ...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~ 160 (301)
T d1l0qa2 87 QVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV----G--RSP 160 (301)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC----C--SSE
T ss_pred cccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeeccc----C--CCc
Confidence 4444 567899999999887632 23345678999999766667777799999999988743221100 0 001
Q ss_pred eceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE
Q psy12356 160 QGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY 238 (400)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~ 238 (400)
..+. ..+++ ........++.+.+|+........ .. .+......++|+|+|+.
T Consensus 161 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------------~~~~~~~~~~~~~~g~~ 213 (301)
T d1l0qa2 161 KGIA----------VTPDGTKVYVANFDSMSISVIDTVTNSVID----TV-------------KVEAAPSGIAVNPEGTK 213 (301)
T ss_dssp EEEE----------ECTTSSEEEEEETTTTEEEEEETTTTEEEE----EE-------------ECSSEEEEEEECTTSSE
T ss_pred eEEE----------eeccccceeeecccccccccccccceeeee----cc-------------cccCCcceeeccccccc
Confidence 1111 12332 223333456677777766543211 00 12245678999999997
Q ss_pred EE-Ee---cCCeEEEEeCCCCCCceeeecCCCcCCCCcccCCCCCceeecCcccccceeeccCccceeccccccceEEEE
Q psy12356 239 MI-SR---DYLCVKVWDLHMESRPVETYPTHTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRIFANAHTYHINSIS 314 (400)
Q Consensus 239 la-s~---~D~tIklWD~~~~~~~l~~~~~h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 314 (400)
++ +. .+++|++||+.++. .+..+.
T Consensus 214 ~~v~~~~~~~~~v~v~D~~t~~-~~~~~~--------------------------------------------------- 241 (301)
T d1l0qa2 214 AYVTNVDKYFNTVSMIDTGTNK-ITARIP--------------------------------------------------- 241 (301)
T ss_dssp EEEEEECSSCCEEEEEETTTTE-EEEEEE---------------------------------------------------
T ss_pred cccccccceeeeeeeeecCCCe-EEEEEc---------------------------------------------------
Confidence 75 32 25789999998652 222221
Q ss_pred EcCCCcEEeecccchhhcccccceeEEEEccCCCEE-EEe-cCCeEEEEeCccCCeeEEEEee
Q psy12356 315 VNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETY-LSA-DDLRINLWHLEITDQSFNIVDI 375 (400)
Q Consensus 315 ~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~l-as~-~D~~i~lW~~~~~~~~~~~~~~ 375 (400)
+...+..++|||||++| +++ .|++|++||+++.+ ....+.+
T Consensus 242 -------------------~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~-~~~~~~v 284 (301)
T d1l0qa2 242 -------------------VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNT-ITATMAV 284 (301)
T ss_dssp -------------------CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEEC
T ss_pred -------------------CCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCe-EEEEEeC
Confidence 01125579999999976 565 68999999998654 5555554
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.80 E-value=2.7e-18 Score=159.08 Aligned_cols=270 Identities=12% Similarity=0.060 Sum_probs=159.4
Q ss_pred CeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE-EeeCCCeE
Q psy12356 16 ELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL-LSTNDQSF 94 (400)
Q Consensus 16 ~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l-~ss~D~tI 94 (400)
+|+++++.|++|+|||+.+. ++++++..+... ..+.+++|+||+. .++ +++.|+.|
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~-----------~~~~~i~~~~~~----------~~~~~i~~spDg~--~l~v~~~~~~~v 58 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKM-----------AVDKVITIADAG----------PTPMVPMVAPGGR--IAYATVNKSESL 58 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-----------EEEEEEECTTCT----------TCCCCEEECTTSS--EEEEEETTTTEE
T ss_pred eEEEEEcCCCEEEEEECCCC-----------eEEEEEECCCCC----------CCccEEEECCCCC--EEEEEECCCCeE
Confidence 48999999999999999853 345566544321 2367899999874 444 45679999
Q ss_pred EEEEccCCCccc----c-----cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceeceecc
Q psy12356 95 NIVDIKPTNMEE----L-----NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVP 165 (400)
Q Consensus 95 ~lWd~~~~~~~~----~-----~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (400)
++||+++++... + ...+..++|+|++ +.++.+..+.....|....
T Consensus 59 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~~l~~~~~~~~~~~~~~~~------------------------- 112 (337)
T d1pbyb_ 59 VKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEV------------------------- 112 (337)
T ss_dssp EEEETTTCCEEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEE-------------------------
T ss_pred EEEECCCCcEEEEEecCCCcccccceeeEEEcCCC-cEEEEeecCCcceeeeccc-------------------------
Confidence 999999987321 1 1234578999986 5666665544433333221
Q ss_pred CchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEecCC
Q psy12356 166 ESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISRDYL 245 (400)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~~D~ 245 (400)
.++.+.+||..++... +.+ .+...+..++|+|||+++++++ +
T Consensus 113 --------------------~~~~~~~~d~~~~~~~----~~~-------------~~~~~~~~~~~s~dg~~l~~~~-~ 154 (337)
T d1pbyb_ 113 --------------------QPTRVALYDAETLSRR----KAF-------------EAPRQITMLAWARDGSKLYGLG-R 154 (337)
T ss_dssp --------------------CCCEEEEEETTTTEEE----EEE-------------ECCSSCCCEEECTTSSCEEEES-S
T ss_pred --------------------cccceeeccccCCeEE----Eec-------------cccCCceEEEEcCCCCEEEEEc-C
Confidence 2456777877765431 111 1224567899999999998653 4
Q ss_pred eEEEEeCCCCCCceeeecCCC------cCCCCcccC--CCCCce------eecCcccccce-----ee------ccCccc
Q psy12356 246 CVKVWDLHMESRPVETYPTHT------KEENGQLRD--PSNITA------LRVPQIKPIEL-----TV------EASPRR 300 (400)
Q Consensus 246 tIklWD~~~~~~~l~~~~~h~------~~~~g~~~~--~~~~~~------i~l~~~~~~~~-----~~------~~~~~~ 300 (400)
.+.+||..++. ...++..+. ..+++.... ...... ...|....... .. .+....
T Consensus 155 ~~~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T d1pbyb_ 155 DLHVMDPEAGT-LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233 (337)
T ss_dssp SEEEEETTTTE-EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred CcceeeeecCc-EEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEE
Confidence 57889999863 455554332 223333211 111111 11111000000 00 011111
Q ss_pred eeccccccceEEEEEcCCCcEEeecccc--hh---------hcccccceeEEEEccCCCEEEEe-cCCeEEEEeCccCCe
Q psy12356 301 IFANAHTYHINSISVNSDQLTVEASPRG--IF---------ADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLEITDQ 368 (400)
Q Consensus 301 ~~~~~~~~~i~~i~~s~dg~~~~~~~~~--~~---------~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~~~~~ 368 (400)
....++........++|++.++...... .+ ...+...+.+++|||||++|+++ .|++|+|||.++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~- 312 (337)
T d1pbyb_ 234 REVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE- 312 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC-
T ss_pred EEecCCCcceEEEEecccceEEEEccccEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc-
Confidence 1122355567778888888876543211 11 12456678999999999999987 69999999998755
Q ss_pred eEEEEe
Q psy12356 369 SFNIVD 374 (400)
Q Consensus 369 ~~~~~~ 374 (400)
....++
T Consensus 313 ~v~~i~ 318 (337)
T d1pbyb_ 313 KKGQVD 318 (337)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 334443
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.79 E-value=3e-18 Score=160.50 Aligned_cols=212 Identities=11% Similarity=0.023 Sum_probs=137.4
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..|.+++|||||++|++++.++.+++|+..+.. ....+..|.. .+.+++|+|+++
T Consensus 86 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~------------~~~~~~~spdg~-- 140 (360)
T d1k32a3 86 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK-----------PTVIERSREA------------MITDFTISDNSR-- 140 (360)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCC-----------EEEEEECSSS------------CCCCEEECTTSC--
T ss_pred ceEEeeeecccccccceeccccccccccccccc-----------eeeeeecccc------------cccchhhcccee--
Confidence 468899999999999999999999999998642 3345566653 377899999874
Q ss_pred eEEEee----------CCCeEEEEEccCCCc---ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccce
Q psy12356 84 HFLLST----------NDQSFNIVDIKPTNM---EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKC 150 (400)
Q Consensus 84 ~~l~ss----------~D~tI~lWd~~~~~~---~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~ 150 (400)
.++.++ .++.+++||+.+++. ..+...+..++|+|++ +.|++++.|+.+++||.....+.......
T Consensus 141 ~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~s~~~~~~~~d~~~~~~~~~~~~~ 219 (360)
T d1k32a3 141 FIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADS-KNLYYLSYRSLDPSPDRVVLNFSFEVVSK 219 (360)
T ss_dssp EEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTS-CEEEEEESCCCCCEECSSSSCEECCSCBE
T ss_pred eeeeeccccccceeeccccceeeeccccCceeeecccccccccccccCCC-CEEEEEeCCCceEcccccccceeeccccc
Confidence 555332 355799999988763 2345567889999985 78999999999999997654321100000
Q ss_pred ec--cCc------------c--------------cceeceeccCchhhhhhcc-------------cCcceeecCCCCCe
Q psy12356 151 LI--EGT------------N--------------CNCQGLIVPESKREERQSS-------------QNRREKEDNRRKPA 189 (400)
Q Consensus 151 ~~--~~~------------~--------------~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~dg~ 189 (400)
.. ... . ...+.+.+..+....+... +.....++++.++.
T Consensus 220 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
T d1k32a3 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGV 299 (360)
T ss_dssp EEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEE
T ss_pred eEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCE
Confidence 00 000 0 0000000000000000000 01112345567889
Q ss_pred EEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 190 IRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 190 i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
+++||+.+++. ..|.+.|.+++|||||++|+++ .|++|++||+.++.. ..++
T Consensus 300 i~~~d~~~~~~--------------------~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~-~~~~ 352 (360)
T d1k32a3 300 LLKYDVKTRKV--------------------TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED-ERTV 352 (360)
T ss_dssp EEEEETTTCCE--------------------EEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTS-CEEC
T ss_pred EEEEECCCCeE--------------------EEecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCc-ceEE
Confidence 99999876432 1345679999999999999974 689999999998743 3444
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.78 E-value=2.6e-18 Score=168.51 Aligned_cols=311 Identities=9% Similarity=-0.033 Sum_probs=183.5
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
.|..++|||||++|++++.||+|++||+.+++.. ....+....+|. ..+.+..|+||++ +
T Consensus 63 ~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~------~~~~i~~~~~~~------------~~~~s~~~SpDG~--~ 122 (432)
T d1qksa2 63 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT------TVAEIKIGSEAR------------SIETSKMEGWEDK--Y 122 (432)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC------EEEEEECCSEEE------------EEEECCSTTCTTT--E
T ss_pred CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCce------EEEEEecCCCCC------------CeEEecccCCCCC--E
Confidence 5889999999999999999999999998764311 000111222232 2355566778874 4
Q ss_pred EE-EeeCCCeEEEEEccCCCcc----c-----------ccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccc
Q psy12356 85 FL-LSTNDQSFNIVDIKPTNME----E-----------LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHS 148 (400)
Q Consensus 85 ~l-~ss~D~tI~lWd~~~~~~~----~-----------~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~ 148 (400)
++ +++.|++|+|||.++++.. . ......++.++|++..++++.+.++.|.+||..+.......
T Consensus 123 l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~- 201 (432)
T d1qksa2 123 AIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT- 201 (432)
T ss_dssp EEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE-
T ss_pred EEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEE-
Confidence 44 4567999999999987631 1 12346788999987666677788999999998876321100
Q ss_pred ceeccCcccceeceeccCchhhhhhcccCcc-eeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 149 KCLIEGTNCNCQGLIVPESKREERQSSQNRR-EKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
.+.. +.....+ ...|++. ..+....++.+.++|.+...... .+.... ...|....
T Consensus 202 -~i~~--g~~~~~~----------~~spdg~~~~va~~~~~~v~v~d~~~~~~~~----~~~~g~-------~~~~~~~~ 257 (432)
T d1qksa2 202 -EISA--ERFLHDG----------GLDGSHRYFITAANARNKLVVIDTKEGKLVA----IEDTGG-------QTPHPGRG 257 (432)
T ss_dssp -EEEC--CSSEEEE----------EECTTSCEEEEEEGGGTEEEEEETTTTEEEE----EEECSS-------SSBCCTTC
T ss_pred -EEcc--cCccccc----------eECCCCCEEEEeccccceEEEeecccceEEE----EeccCc-------cccccCcc
Confidence 0000 0111122 2335553 34444567789999987654321 110000 01233444
Q ss_pred EEEEECCCCcEEEEe--cCCeEEEEeCCCCCCceee--ecCCCcCCCCccc-CCCCCceeecCcccccceeeccCcccee
Q psy12356 228 SDVKISNSGRYMISR--DYLCVKVWDLHMESRPVET--YPTHTKEENGQLR-DPSNITALRVPQIKPIELTVEASPRRIF 302 (400)
Q Consensus 228 ~~v~fSpdg~~las~--~D~tIklWD~~~~~~~l~~--~~~h~~~~~g~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~ 302 (400)
....+.+.+...++. ++++|.+|+......+-.. .....+.++|..+ ..+.+.+.++|.....
T Consensus 258 ~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~------------ 325 (432)
T d1qksa2 258 ANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATL------------ 325 (432)
T ss_dssp EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTT------------
T ss_pred cceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccC------------
Confidence 556666667766654 4788999987664321110 1111134455432 3445566777754221
Q ss_pred ccccccceEEEEEcCCCcEEeeccc----chh-------hcccccceeEEEEccCCCEEEEe------cCCeEEEEeCcc
Q psy12356 303 ANAHTYHINSISVNSDQLTVEASPR----GIF-------ADAHTYHISSTSVNSDQETYLSA------DDLRINLWHLEI 365 (400)
Q Consensus 303 ~~~~~~~i~~i~~s~dg~~~~~~~~----~~~-------~~gh~~~V~~i~fspDg~~las~------~D~~i~lW~~~~ 365 (400)
.+|.....++++ |||+.++..+. +++ ..+|...|.+++|||||++|+.+ .|+.|+|||..+
T Consensus 326 -~~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T 403 (432)
T d1qksa2 326 -NPEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKT 403 (432)
T ss_dssp -CSSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred -CCCCCeeeEEEE-EechhhcccccCCceEecccccccccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCC
Confidence 123333455665 78877765432 111 12567789999999999987542 267899999887
Q ss_pred CCeeEEEEee
Q psy12356 366 TDQSFNIVDI 375 (400)
Q Consensus 366 ~~~~~~~~~~ 375 (400)
.+ ..+++.-
T Consensus 404 ~k-~~~~i~~ 412 (432)
T d1qksa2 404 LE-LKHVIKD 412 (432)
T ss_dssp TE-EEEEECC
T ss_pred ce-EEeEecC
Confidence 54 3455443
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.73 E-value=1.1e-16 Score=155.84 Aligned_cols=272 Identities=9% Similarity=0.008 Sum_probs=158.5
Q ss_pred EEeeCCCeEEEEEccCCCc-cc--ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcccceece
Q psy12356 86 LLSTNDQSFNIVDIKPTNM-EE--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGL 162 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~~-~~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (400)
++.+.|++|+|||+.+++. .. ....+.+++|+||| +++++++.|++|++||+.+++.... ..+....+ ..+.
T Consensus 36 V~~~~dg~v~vwD~~t~~~~~~l~~g~~~~~vafSPDG-k~l~~~~~d~~v~vwd~~t~~~~~~--~~i~~~~~--~~~~ 110 (426)
T d1hzua2 36 VTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKV--AEIKIGIE--ARSV 110 (426)
T ss_dssp EEETTTTEEEEEETTTCSEEEEEECCSSEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEE--EEEECCSE--EEEE
T ss_pred EEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCC-CEEEEEeCCCCEEEEEccCCceeEE--EEEeCCCC--Ccce
Confidence 4467899999999999883 22 22458899999986 7889999999999999998842111 00111111 1111
Q ss_pred eccCchhhhhhcccCcce-eecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEE
Q psy12356 163 IVPESKREERQSSQNRRE-KEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMIS 241 (400)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~-~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las 241 (400)
.++ ..++|++.. .+++..++++++||...+... +.+..+... .......+.+....+.++++++.++.
T Consensus 111 ~~s------~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~i~~s~d~~~~~~ 179 (426)
T d1hzua2 111 ESS------KFKGYEDRYTIAGAYWPPQFAIMDGETLEPK----QIVSTRGMT-VDTQTYHPEPRVAAIIASHEHPEFIV 179 (426)
T ss_dssp EEC------CSTTCTTTEEEEEEEESSEEEEEETTTCCEE----EEEECCEEC-SSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred EEe------eeecCCCCEEEEeecCCCeEEEEcCCcccee----EEeeccCCC-ccceeecCCCceeEEEECCCCCEEEE
Confidence 111 123456643 444557899999999876432 111111000 00000123345677899999998774
Q ss_pred e--cCCeEEEEeCCCCCCceeeecCCC-------cCCCCccc--CCCCCceeecCcccccceeec---cC-----cccee
Q psy12356 242 R--DYLCVKVWDLHMESRPVETYPTHT-------KEENGQLR--DPSNITALRVPQIKPIELTVE---AS-----PRRIF 302 (400)
Q Consensus 242 ~--~D~tIklWD~~~~~~~l~~~~~h~-------~~~~g~~~--~~~~~~~i~l~~~~~~~~~~~---~~-----~~~~~ 302 (400)
+ +.+.+.+++............++. +.++|+++ +......+.+++......... +. ....+
T Consensus 180 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (426)
T d1hzua2 180 NVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF 259 (426)
T ss_dssp EETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEE
T ss_pred ecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeee
Confidence 3 457788887776532222221221 45677753 233344444444433322110 00 01112
Q ss_pred ccccccceEEEEEcCCCcEEeeccc-c---h-------hhcccccceeEEEEccCCCEEEE-------e-cCCeEEEEeC
Q psy12356 303 ANAHTYHINSISVNSDQLTVEASPR-G---I-------FADAHTYHISSTSVNSDQETYLS-------A-DDLRINLWHL 363 (400)
Q Consensus 303 ~~~~~~~i~~i~~s~dg~~~~~~~~-~---~-------~~~gh~~~V~~i~fspDg~~las-------~-~D~~i~lW~~ 363 (400)
...+.+.+.....++|+...+.... . . -..||...|.+++|||||++|+. + .|++|+|||+
T Consensus 260 ~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~ 339 (426)
T d1hzua2 260 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL 339 (426)
T ss_dssp EETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEET
T ss_pred ecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEEC
Confidence 2345566777788888876543221 0 0 02589999999999999999994 3 4789999999
Q ss_pred ccCCeeEEEE
Q psy12356 364 EITDQSFNIV 373 (400)
Q Consensus 364 ~~~~~~~~~~ 373 (400)
.+.+...+++
T Consensus 340 ~t~~~~~~~~ 349 (426)
T d1hzua2 340 KNLDAKYQVL 349 (426)
T ss_dssp TCTTSCCEEE
T ss_pred CCCCcCeEEe
Confidence 8766444443
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.71 E-value=2.2e-15 Score=139.31 Aligned_cols=192 Identities=9% Similarity=0.081 Sum_probs=111.6
Q ss_pred EEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEe-eCCCeEEE
Q psy12356 18 LATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLS-TNDQSFNI 96 (400)
Q Consensus 18 Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~s-s~D~tI~l 96 (400)
+++++.|++|+||+++.. +..+.++++. |. +.|..|+|+||++ .++++ ..|+.|++
T Consensus 7 ~v~~~~~~~I~v~~~~~~--------~~l~~~~~~~-~~------------~~v~~la~spDG~--~L~v~~~~d~~i~~ 63 (333)
T d1ri6a_ 7 YIASPESQQIHVWNLNHE--------GALTLTQVVD-VP------------GQVQPMVVSPDKR--YLYVGVRPEFRVLA 63 (333)
T ss_dssp EEEEGGGTEEEEEEECTT--------SCEEEEEEEE-CS------------SCCCCEEECTTSS--EEEEEETTTTEEEE
T ss_pred EEECCCCCcEEEEEEcCC--------CCeEEEEEEc-CC------------CCEeEEEEeCCCC--EEEEEECCCCeEEE
Confidence 467789999999999753 2333344333 32 3488999999974 45454 46999999
Q ss_pred EEccCCCc--c-----cccccEEEEEEecCCCCEEEEEe-CCCeEEEEecccccccccccceeccCcccceeceeccCch
Q psy12356 97 VDIKPTNM--E-----ELNEVITAAEFHPIDCNLFVYSS-SKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQGLIVPESK 168 (400)
Q Consensus 97 Wd~~~~~~--~-----~~~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (400)
|++..... . .+...+..++|+|++ +++++++ .+++|++|+........... .. . .......
T Consensus 64 ~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg-~~l~v~~~~~~~v~~~~~~~~~~~~~~~-~~-~-~~~~~~~------- 132 (333)
T d1ri6a_ 64 YRIAPDDGALTFAAESALPGSLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVGVVD-VV-E-GLDGCHS------- 132 (333)
T ss_dssp EEECTTTCCEEEEEEEECSSCCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEEEEE-EE-C-CCTTBCC-------
T ss_pred EEEeCCCCcEEEeeecccCCCceEEEEcCCC-CEEeecccCCCceeeeccccccceeccc-cc-C-CCccceE-------
Confidence 99976542 1 122346689999986 5555555 57899999987663211100 00 0 0000111
Q ss_pred hhhhhcccCc-ceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe--cCC
Q psy12356 169 REERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR--DYL 245 (400)
Q Consensus 169 ~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~--~D~ 245 (400)
+...+++ .....+..+..|++|+.............. ...........++|++++.++... ..+
T Consensus 133 ---v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~~~~g~~p~~i~~~~~~~~~~~~~~~~~ 199 (333)
T d1ri6a_ 133 ---ANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAE----------VTTVEGAGPRHMVFHPNEQYAYCVNELNS 199 (333)
T ss_dssp ---CEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE----------EECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ---EEeeecceeeeccccccceeeEEEeccCCcceeeecee----------eeeecCCCccEEEEeccceeEEeeccccC
Confidence 1122333 233333456789999876543211000000 000122346789999999988743 457
Q ss_pred eEEEEeCCCCC
Q psy12356 246 CVKVWDLHMES 256 (400)
Q Consensus 246 tIklWD~~~~~ 256 (400)
...+|+.....
T Consensus 200 ~~~v~~~~~~~ 210 (333)
T d1ri6a_ 200 SVDVWELKDPH 210 (333)
T ss_dssp EEEEEESSCTT
T ss_pred ceEEEeecccc
Confidence 88899877543
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.66 E-value=2.5e-14 Score=134.90 Aligned_cols=118 Identities=12% Similarity=0.056 Sum_probs=82.1
Q ss_pred EEEECCCCCeEEEec----------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEE
Q psy12356 8 ASQRFSDGELLATGD----------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 77 (400)
Q Consensus 8 ~v~fspdG~~Las~s----------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~s 77 (400)
.++|||||++|++++ .++.|+|||..+++ +...+..+...... .......+.|+
T Consensus 70 ~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~-----------~~~~~~~~~~~~~~-----~~~~~~~~~~s 133 (373)
T d2madh_ 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL-----------PIADIELPDAPRFD-----VGPYSWMNANT 133 (373)
T ss_pred cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCc-----------EEEEEecCCcceeE-----eccCCCcEEEE
Confidence 689999999999875 46889999998643 23333333211000 00113457899
Q ss_pred eccCCceEEEe--eCCCeEEEEEccCCCcccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 78 RRKNQAHFLLS--TNDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 78 p~~~~~~~l~s--s~D~tI~lWd~~~~~~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
|++. .+++. ..++.+.+|+....+...+.....++.|+|++...+++.+.|+++.+||...+..
T Consensus 134 ~dg~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~ 199 (373)
T d2madh_ 134 PNNA--DLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAA 199 (373)
T ss_pred eCCC--cEEEEEEcCCCceEEeeccCCeEEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCcee
Confidence 9874 33332 4578899999887765444455678899999877888999999999999988743
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.58 E-value=3.1e-14 Score=131.13 Aligned_cols=216 Identities=11% Similarity=0.029 Sum_probs=127.2
Q ss_pred eEEEEEECCCCCeE-EEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELL-ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~L-as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+.+++|||||++| ++++.+++|.+||+.+++ .+..+..+... .....+..++|+|++.
T Consensus 35 ~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~-----------~~~~~~~~~~~-------~~~~~~~~v~~s~dg~-- 94 (337)
T d1pbyb_ 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE-----------TLGRIDLSTPE-------ERVKSLFGAALSPDGK-- 94 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCC-----------EEEEEECCBTT-------EEEECTTCEEECTTSS--
T ss_pred CccEEEECCCCCEEEEEECCCCeEEEEECCCCc-----------EEEEEecCCCc-------ccccceeeEEEcCCCc--
Confidence 35789999999987 577889999999998643 34445444321 0112245788999874
Q ss_pred eEEEee------------CCCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccccccc
Q psy12356 84 HFLLST------------NDQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHS 148 (400)
Q Consensus 84 ~~l~ss------------~D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~ 148 (400)
.++++. .+..+.+||..++... .....+.+++|+|++ .++++++. .+.+||+.++.......
T Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~--~~~~~d~~~~~~~~~~~ 171 (337)
T d1pbyb_ 95 TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG-SKLYGLGR--DLHVMDPEAGTLVEDKP 171 (337)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTS-SCEEEESS--SEEEEETTTTEEEEEEC
T ss_pred EEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCC-CEEEEEcC--CcceeeeecCcEEEEee
Confidence 444443 3568899999887632 123456789999986 56666654 46789998875322100
Q ss_pred --ce----e---ccCc-------ccce-----------------------eceeccCchhhhh------------hcccC
Q psy12356 149 --KC----L---IEGT-------NCNC-----------------------QGLIVPESKREER------------QSSQN 177 (400)
Q Consensus 149 --~~----~---~~~~-------~~~~-----------------------~~~~~~~~~~~~~------------~~~~~ 177 (400)
.. . .... .... .......+..... ...++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (337)
T d1pbyb_ 172 IQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPA 251 (337)
T ss_dssp STTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTT
T ss_pred cCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEeccc
Confidence 00 0 0000 0000 0000000000000 00112
Q ss_pred cceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCC
Q psy12356 178 RREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMISR-DYLCVKVWDLHMES 256 (400)
Q Consensus 178 ~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~ 256 (400)
+..... .++.|++||+.+++... .. .+...+.+++|||||++|+.+ .|++|+|||+.+.
T Consensus 252 ~~~~~~--~~~~i~v~d~~~~~~~~----~~-------------~~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~- 311 (337)
T d1pbyb_ 252 KTRAFG--AYNVLESFDLEKNASIK----RV-------------PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL- 311 (337)
T ss_dssp SSEEEE--EESEEEEEETTTTEEEE----EE-------------ECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC-
T ss_pred ceEEEE--ccccEEEEECCCCcEEE----EE-------------cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC-
Confidence 211221 36899999999865431 11 233568899999999998764 6899999999986
Q ss_pred Cceeeec
Q psy12356 257 RPVETYP 263 (400)
Q Consensus 257 ~~l~~~~ 263 (400)
+.+++++
T Consensus 312 ~~v~~i~ 318 (337)
T d1pbyb_ 312 EKKGQVD 318 (337)
T ss_dssp CEEEEEE
T ss_pred cEEEEEE
Confidence 3566663
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.57 E-value=5.8e-14 Score=131.15 Aligned_cols=106 Identities=7% Similarity=0.016 Sum_probs=72.3
Q ss_pred EECCCCCeEEEe-----cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 10 QRFSDGELLATG-----DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 10 ~fspdG~~Las~-----s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+.+|||++++.. +.+.+|.|||..++ +++.++..+. +..++|+||+. .
T Consensus 8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg-----------~~~~~~~~g~--------------~~~~a~SpDg~--~ 60 (355)
T d2bbkh_ 8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAG-----------RVIGMIDGGF--------------LPNPVVADDGS--F 60 (355)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTT-----------EEEEEEEECS--------------SCEEEECTTSS--C
T ss_pred eeCCCCCEEEEEecccCCCcCeEEEEECCCC-----------cEEEEEECCC--------------CCceEEcCCCC--E
Confidence 568999999764 35668999998753 3455555443 33689999984 4
Q ss_pred EEEe----------eCCCeEEEEEccCCCccc----c-------cccEEEEEEecCCCCEEEEE--eCCCeEEEEecccc
Q psy12356 85 FLLS----------TNDQSFNIVDIKPTNMEE----L-------NEVITAAEFHPIDCNLFVYS--SSKGTIRLCDMRAA 141 (400)
Q Consensus 85 ~l~s----------s~D~tI~lWd~~~~~~~~----~-------~~~V~sv~f~p~~~~~las~--s~Dg~i~lWD~~~~ 141 (400)
++++ +.|+.|++||+.+++... + ......++|+|++. .++.+ +.+..+.+||..++
T Consensus 61 l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~~~v~~~~~~~~~~~~~~~~~ 139 (355)
T d2bbkh_ 61 IAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGK 139 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTT
T ss_pred EEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCC-eeEEecCCCCceeeeeecCCC
Confidence 5443 247899999999887311 0 11234578999874 44444 34778999999988
Q ss_pred cc
Q psy12356 142 AL 143 (400)
Q Consensus 142 ~~ 143 (400)
+.
T Consensus 140 ~~ 141 (355)
T d2bbkh_ 140 AF 141 (355)
T ss_dssp EE
T ss_pred cE
Confidence 54
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.56 E-value=1.6e-12 Score=117.63 Aligned_cols=97 Identities=9% Similarity=0.126 Sum_probs=71.5
Q ss_pred EEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEE-eeCCCeEEEE
Q psy12356 19 ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLL-STNDQSFNIV 97 (400)
Q Consensus 19 as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~-ss~D~tI~lW 97 (400)
++++.|++|.|||+.++ ++++++.... .+..++|+||+. ++++ ++.+++|++|
T Consensus 6 V~~~~~~~v~v~D~~t~-----------~~~~~i~~g~-------------~p~~va~spdG~--~l~v~~~~~~~i~v~ 59 (301)
T d1l0qa2 6 IANSESDNISVIDVTSN-----------KVTATIPVGS-------------NPMGAVISPDGT--KVYVANAHSNDVSII 59 (301)
T ss_dssp EEETTTTEEEEEETTTT-----------EEEEEEECSS-------------SEEEEEECTTSS--EEEEEEGGGTEEEEE
T ss_pred EEECCCCEEEEEECCCC-----------eEEEEEECCC-------------CceEEEEeCCCC--EEEEEECCCCEEEEE
Confidence 56778999999999853 3455554322 267899999874 5544 5679999999
Q ss_pred EccCCCcc-c--ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 98 DIKPTNME-E--LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 98 d~~~~~~~-~--~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
|+.+++.. . ....+..++|++++..+++++..++.+++||..++
T Consensus 60 d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (301)
T d1l0qa2 60 DTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN 106 (301)
T ss_dssp ETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred ECCCCceeeeeeccccccccccccccccccccccccceeeecccccc
Confidence 99887631 1 12346789999987666777777899999998776
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.51 E-value=1e-12 Score=121.01 Aligned_cols=213 Identities=11% Similarity=0.099 Sum_probs=119.3
Q ss_pred eeEEEEEECCCCCeEE-EecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 4 YMREASQRFSDGELLA-TGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 4 ~~v~~v~fspdG~~La-s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
+.|..|+|||||++|+ ++..|+.|++|++.... ... ++..|... ...+..++|+||+.
T Consensus 37 ~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~-------~~~----~~~~~~~~---------~~~p~~l~~spDg~- 95 (333)
T d1ri6a_ 37 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD-------GAL----TFAAESAL---------PGSLTHISTDHQGQ- 95 (333)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT-------CCE----EEEEEEEC---------SSCCSEEEECTTSS-
T ss_pred CCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCC-------CcE----EEeeeccc---------CCCceEEEEcCCCC-
Confidence 3478999999999994 55568999999987532 111 12222110 12366799999974
Q ss_pred ceEEEee-CCCeEEEEEccCCCc------ccccccEEEEEEecCCCCEEEEEe-CCCeEEEEeccccccccccc-ceecc
Q psy12356 83 AHFLLST-NDQSFNIVDIKPTNM------EELNEVITAAEFHPIDCNLFVYSS-SKGTIRLCDMRAAALCDRHS-KCLIE 153 (400)
Q Consensus 83 ~~~l~ss-~D~tI~lWd~~~~~~------~~~~~~V~sv~f~p~~~~~las~s-~Dg~i~lWD~~~~~~~~~~~-~~~~~ 153 (400)
.+++++ .+++|++|+...... ..+...+.++.|+|++ +.++.++ .+..|.+|+........... .....
T Consensus 96 -~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (333)
T d1ri6a_ 96 -FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 173 (333)
T ss_dssp -EEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC
T ss_pred -EEeecccCCCceeeeccccccceecccccCCCccceEEEeeecc-eeeeccccccceeeEEEeccCCcceeeeceeeee
Confidence 566665 588999999876542 1223456788999986 4555554 57789999987653211100 00111
Q ss_pred CcccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeecccccccCccccccc-CCCCCCCcccccccccCeEEEE
Q psy12356 154 GTNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALCDRHSKFFE-EPEDPTNKSFFSEIISSISDVK 231 (400)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~V~~v~ 231 (400)
..+.....+.++ +++ .........+...+|+............... .+. . .........++
T Consensus 174 ~~g~~p~~i~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~ 236 (333)
T d1ri6a_ 174 VEGAGPRHMVFH----------PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE-----N--FSDTRWAADIH 236 (333)
T ss_dssp STTCCEEEEEEC----------TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT-----T--CCSCCCEEEEE
T ss_pred ecCCCccEEEEe----------ccceeEEeeccccCceEEEeecccccceeeeeeeeeeec-----C--CCccccceeEE
Confidence 111111122222 222 2233333456677776543221110000000 000 0 01224567799
Q ss_pred ECCCCcEEEE-e-cCCeEEEEeCCCCC
Q psy12356 232 ISNSGRYMIS-R-DYLCVKVWDLHMES 256 (400)
Q Consensus 232 fSpdg~~las-~-~D~tIklWD~~~~~ 256 (400)
++||++++.. . .++++++|++....
T Consensus 237 ~s~d~~~~~~~~~~~~~~~~~~~~~~~ 263 (333)
T d1ri6a_ 237 ITPDGRHLYACDRTASLITVFSVSEDG 263 (333)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred EecccCceeeecccCCeEEEEEEcCCC
Confidence 9999998764 3 57899999987643
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.50 E-value=6.1e-13 Score=130.23 Aligned_cols=107 Identities=9% Similarity=0.088 Sum_probs=75.1
Q ss_pred eEEEEEECCCCCeEEEecC---------CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEE
Q psy12356 5 MREASQRFSDGELLATGDK---------GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 75 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~---------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~ 75 (400)
.|.++.|||||++||.++. ++.++|||+.+++ +..+..|. +.+..+.
T Consensus 63 ~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~------------~~~l~~~~------------~~~~~~~ 118 (470)
T d2bgra1 63 SINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ------------LITEERIP------------NNTQWVT 118 (470)
T ss_dssp CCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE------------ECCSSCCC------------TTEEEEE
T ss_pred ccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc------------ccccccCC------------ccccccc
Confidence 4789999999999998853 5788999998642 22344444 3478899
Q ss_pred EEeccCCceEEEeeCCCeEEEEEccCCCcccc----------------------cccEEEEEEecCCCCEEEEEeCCCe-
Q psy12356 76 WLRRKNQAHFLLSTNDQSFNIVDIKPTNMEEL----------------------NEVITAAEFHPIDCNLFVYSSSKGT- 132 (400)
Q Consensus 76 ~sp~~~~~~~l~ss~D~tI~lWd~~~~~~~~~----------------------~~~V~sv~f~p~~~~~las~s~Dg~- 132 (400)
||||+. .++. ..|+.+.+|+..++..... .+...++.|+||| +.||+...|.+
T Consensus 119 ~SPDG~--~ia~-~~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDG-k~ia~~~~d~~~ 194 (470)
T d2bgra1 119 WSPVGH--KLAY-VWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTE 194 (470)
T ss_dssp ECSSTT--CEEE-EETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTT
T ss_pred cccCcc--eeeE-eecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCC-CccceeEecCCc
Confidence 999984 4444 5678999999987762110 1124567899986 68888877644
Q ss_pred EEEEecc
Q psy12356 133 IRLCDMR 139 (400)
Q Consensus 133 i~lWD~~ 139 (400)
++.|++.
T Consensus 195 v~~~~~~ 201 (470)
T d2bgra1 195 VPLIEYS 201 (470)
T ss_dssp CCEEEEE
T ss_pred CceEEEE
Confidence 6666654
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.34 E-value=4.1e-12 Score=118.24 Aligned_cols=218 Identities=9% Similarity=0.072 Sum_probs=115.6
Q ss_pred EEEEEECCCCCeEEEec----------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEE
Q psy12356 6 REASQRFSDGELLATGD----------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 75 (400)
Q Consensus 6 v~~v~fspdG~~Las~s----------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~ 75 (400)
+..++|||||++|+.++ .|+.|++||..+++ +.+.+..+.... .........++
T Consensus 49 ~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~-----------~~~~~~~~~~~~-----~~~~~~~~~~~ 112 (355)
T d2bbkh_ 49 LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL-----------PTADIELPDAPR-----FLVGTYPWMTS 112 (355)
T ss_dssp SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-----------EEEEEEETTCCC-----CCBSCCGGGEE
T ss_pred CCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCC-----------EEEEEecCCcce-----eecCCCCceEE
Confidence 34789999999998653 47899999998643 233333332110 00011234577
Q ss_pred EEeccCCceEEEe--eCCCeEEEEEccCCCccc----c------------------------------------------
Q psy12356 76 WLRRKNQAHFLLS--TNDQSFNIVDIKPTNMEE----L------------------------------------------ 107 (400)
Q Consensus 76 ~sp~~~~~~~l~s--s~D~tI~lWd~~~~~~~~----~------------------------------------------ 107 (400)
|+|++. .++++ +.+..+++||..+++... .
T Consensus 113 ~s~dg~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~ 190 (355)
T d2bbkh_ 113 LTPDGK--TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH 190 (355)
T ss_dssp ECTTSS--EEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS
T ss_pred EecCCC--eeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEeccccc
Confidence 888764 44443 346778888877654110 0
Q ss_pred ---cccEEEEEEecCCCCEEEEEeCCCeEEEEeccccccc--ccccceeccCcccceeceeccCchhhhhhcccCcce--
Q psy12356 108 ---NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALC--DRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRRE-- 180 (400)
Q Consensus 108 ---~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 180 (400)
...+....+.+++ ..++.++.++.+.+|++..+... .......... ....+.+.....+...+++..
T Consensus 191 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~d~~~~~ 264 (355)
T d2bbkh_ 191 PEDEFLINHPAYSQKA-GRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAE-----RADGWRPGGWQQVAYHRALDRIY 264 (355)
T ss_dssp CTTSCBCSCCEEETTT-TEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHH-----HHTTEEECSSSCEEEETTTTEEE
T ss_pred ceecceeeeccccCCC-CeEEEecCCCeEEEEecCCCcEEEEeccCCcccce-----EeeeeeccceEEEEEeCCCCeEE
Confidence 0012223444443 45677777888888887776321 0000000000 000000000000111122211
Q ss_pred --------eecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcE-E-EEe-cCCeEEE
Q psy12356 181 --------KEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRY-M-ISR-DYLCVKV 249 (400)
Q Consensus 181 --------~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~-l-as~-~D~tIkl 249 (400)
.........|++||+.+++... .+ .+...+.+++|||||+. | +++ .|++|+|
T Consensus 265 ~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~----~~-------------~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v 327 (355)
T d2bbkh_ 265 LLVDQRDEWRHKTASRFVVVLDAKTGERLA----KF-------------EMGHEIDSINVSQDEKPLLYALSTGDKTLYI 327 (355)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEE----EE-------------EEEEEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred EEeccCCceeecCCCCeEEEEeCCCCcEEE----Ee-------------cCCCCEEEEEEcCCCCeEEEEEECCCCEEEE
Confidence 0111234578999988764321 11 12245789999999983 3 454 5899999
Q ss_pred EeCCCCCCceeeecCC
Q psy12356 250 WDLHMESRPVETYPTH 265 (400)
Q Consensus 250 WD~~~~~~~l~~~~~h 265 (400)
||++++. .++++.++
T Consensus 328 ~D~~tg~-~~~~i~~~ 342 (355)
T d2bbkh_ 328 HDAESGE-ELRSVNQL 342 (355)
T ss_dssp EETTTCC-EEEEECCC
T ss_pred EECCCCC-EEEEEeCc
Confidence 9999874 67888655
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.32 E-value=3.8e-10 Score=105.55 Aligned_cols=74 Identities=7% Similarity=-0.057 Sum_probs=52.2
Q ss_pred eeEEEEEECCCCCeEEEe-----cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 4 YMREASQRFSDGELLATG-----DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~-----s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
+.+.+++|||||++++.. +.++.|++||..++ +++.++..+. ...++|+|
T Consensus 21 ~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg-----------~~~~~~~~~~--------------~~~~a~Sp 75 (373)
T d2madh_ 21 GPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSG-----------SILGHVNGGF--------------LPNPVAAH 75 (373)
T ss_pred CCccccccCCCCCEEEEEcccccCCCceEEEEECCCC-----------CEEEEEeCCC--------------CccEEEcC
Confidence 346788999999998764 34567999997753 3455665554 23589999
Q ss_pred ccCCceEEEee----------CCCeEEEEEccCCCc
Q psy12356 79 RKNQAHFLLST----------NDQSFNIVDIKPTNM 104 (400)
Q Consensus 79 ~~~~~~~l~ss----------~D~tI~lWd~~~~~~ 104 (400)
|+. .+++++ .+++|++||..+++.
T Consensus 76 DG~--~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~ 109 (373)
T d2madh_ 76 SGS--EFALASTSFSRIAKGKRTDYVEVFDPVTFLP 109 (373)
T ss_pred CCC--EEEEEeecCCcccccccceEEEEEECCCCcE
Confidence 984 555543 357899999988773
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.31 E-value=6.2e-12 Score=118.83 Aligned_cols=117 Identities=11% Similarity=0.127 Sum_probs=72.0
Q ss_pred EEEEECCCCCeEEEec----------CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEE
Q psy12356 7 EASQRFSDGELLATGD----------KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 76 (400)
Q Consensus 7 ~~v~fspdG~~Las~s----------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~ 76 (400)
..++|||||++|+.++ .|++|++||..+.+ +...+..|.... .........++|
T Consensus 68 ~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~-----------~~~~i~~p~~~~-----~~~g~~p~~~a~ 131 (368)
T d1mdah_ 68 SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL-----------PIADIELPDAPR-----FSVGPRVHIIGN 131 (368)
T ss_dssp CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC-----------EEEEEEETTSCS-----CCBSCCTTSEEE
T ss_pred CcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCc-----------EeeeecCCccce-----ecccCCccceEE
Confidence 4689999999999754 47889999998643 233333332110 000011345899
Q ss_pred EeccCCceEEEee-CCCeEEEEEccCCCcccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 77 LRRKNQAHFLLST-NDQSFNIVDIKPTNMEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 77 sp~~~~~~~l~ss-~D~tI~lWd~~~~~~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+||+. +++++. .++++.+||+.+++.......-.+..+.|.+...++..+.||++.+|++...
T Consensus 132 SpDGk--~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~ 195 (368)
T d1mdah_ 132 CASSA--CLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAA 195 (368)
T ss_dssp CTTSS--CEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred CCCCC--EEEEEeCCCCeEEEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCC
Confidence 99984 566654 6899999999887631110000011123334556777788898888887765
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.26 E-value=1.1e-10 Score=107.18 Aligned_cols=247 Identities=9% Similarity=0.002 Sum_probs=133.4
Q ss_pred eEEEEEECCCCCeE-EEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 5 MREASQRFSDGELL-ATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 5 ~v~~v~fspdG~~L-as~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
.+.+++|+|||++| ++++.++.|++||+.+++ ....+...... ......+..++|+||+.
T Consensus 41 ~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~-----------~~~~~~~~~~~------~~~~~~~~~v~~s~DG~-- 101 (346)
T d1jmxb_ 41 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK-----------NTFHANLSSVP------GEVGRSMYSFAISPDGK-- 101 (346)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTE-----------EEEEEESCCST------TEEEECSSCEEECTTSS--
T ss_pred CcceEEECCCCCEEEEEECCCCcEEEEeCccCe-----------eeeeecccccc------cccCCceEEEEEecCCC--
Confidence 35689999999987 667789999999998642 23333222110 00112356789999874
Q ss_pred eEEEee------------CCCeEEEEEccCCCccc----c--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccc
Q psy12356 84 HFLLST------------NDQSFNIVDIKPTNMEE----L--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCD 145 (400)
Q Consensus 84 ~~l~ss------------~D~tI~lWd~~~~~~~~----~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~ 145 (400)
.+++++ .+..+++||..++.... + ...+..+.++++ +.++++ ++.+.+||+.++....
T Consensus 102 ~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~ 177 (346)
T d1jmxb_ 102 EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD-GSLYVA---GPDIYKMDVKTGKYTV 177 (346)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT-SCEEEE---SSSEEEECTTTCCEEE
T ss_pred EEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCC-CEEEEe---CCcceEEEccCCCEEE
Confidence 444432 47789999998765311 1 123444556664 344443 2458899998875432
Q ss_pred ccc--ceeccCcccceec-eeccCchhhhh-------hcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCC
Q psy12356 146 RHS--KCLIEGTNCNCQG-LIVPESKREER-------QSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPT 215 (400)
Q Consensus 146 ~~~--~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~ 215 (400)
... ............. +.........+ ..........++..++.+.+||+..+....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 244 (346)
T d1jmxb_ 178 ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT------------- 244 (346)
T ss_dssp EECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE-------------
T ss_pred EEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEE-------------
Confidence 110 0000000000000 00000000000 000011111222234566667766543210
Q ss_pred CcccccccccCeEEEEECCCCcEEEEecCCeEEEEeCCCCCCceeeecC-C-----CcCCCCccc-CCCCCceeecCccc
Q psy12356 216 NKSFFSEIISSISDVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPT-H-----TKEENGQLR-DPSNITALRVPQIK 288 (400)
Q Consensus 216 ~~~~~~~h~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~~-h-----~~~~~g~~~-~~~~~~~i~l~~~~ 288 (400)
..+..|...+..+.++|++.+++...++.|++||..++. .++.+.. | .+++||+++ .++.++.|++|+..
T Consensus 245 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~d~~~~~-~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~ 321 (346)
T d1jmxb_ 245 --QEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRK-LIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 321 (346)
T ss_dssp --EEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTE-EEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred --EEeecccceeEEEEEeCCCCEEEEecCCeEEEEECCCCc-EEEEEcCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECc
Confidence 112345567889999999998887667789999999863 5555542 2 257888864 45667888888765
Q ss_pred cc
Q psy12356 289 PI 290 (400)
Q Consensus 289 ~~ 290 (400)
..
T Consensus 322 t~ 323 (346)
T d1jmxb_ 322 TL 323 (346)
T ss_dssp TT
T ss_pred cC
Confidence 43
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.16 E-value=2.2e-11 Score=117.79 Aligned_cols=297 Identities=10% Similarity=0.063 Sum_probs=147.4
Q ss_pred EEEEEECCCCCeEEEe-cCCCeEEEEEcCCCCccccCCCCcceeeeeee-ccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 6 REASQRFSDGELLATG-DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 6 v~~v~fspdG~~Las~-s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+....++|||++|... ..+.+|.++|+.+.+ ..+.+. .+. ..+..++|+|+++ .
T Consensus 74 ~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k-----------~~~ii~iP~g------------~gphgi~~spdg~-t 129 (441)
T d1qnia2 74 ISMTDGRYDGKYLFINDKANTRVARIRLDIMK-----------TDKITHIPNV------------QAIHGLRLQKVPK-T 129 (441)
T ss_dssp EEEETTEEEEEEEEEEETTTTEEEEEETTTTE-----------EEEEEECTTC------------CCEEEEEECCSSB-C
T ss_pred cceecccCCCCEEEEEcCCCCEEEEEECCCCc-----------EeeEEecCCC------------CCccceEEeccCC-E
Confidence 3456678999999554 568899999998642 222222 111 2367799999874 2
Q ss_pred eEEEeeCCCe------------------EEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEeCCCeEEEEeccccc
Q psy12356 84 HFLLSTNDQS------------------FNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAA 142 (400)
Q Consensus 84 ~~l~ss~D~t------------------I~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~ 142 (400)
.++++..+.. +..+|..+.+.. ........++|+|+|+..++++...+.+..+|..+..
T Consensus 130 ~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~ 209 (441)
T d1qnia2 130 NYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRN 209 (441)
T ss_dssp CEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCS
T ss_pred EEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcc
Confidence 3444332222 344666554421 1123456789999975444444344444444544442
Q ss_pred ccccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccc
Q psy12356 143 LCDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSE 222 (400)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
.... +. +.. ........+++..... +.++.+.+++...... ++.. | .
T Consensus 210 ~~d~----i~-----------v~n-~p~~~~~~~dGk~~~v-~~~~v~vvd~~~~~~v----~~~I--P----------v 256 (441)
T d1qnia2 210 DRDW----VV-----------VFN-VERIAAAVKAGNFKTI-GDSKVPVVDGRGESEF----TRYI--P----------V 256 (441)
T ss_dssp SBCE----EE-----------EEE-HHHHHHHHHTTCCBCC-TTCCCCEEECSSSCSS----EEEE--C----------C
T ss_pred eEEE----EE-----------eCC-ccceEEEecCCCEEEe-CCCCcEEEEcccCCce----EEEE--e----------C
Confidence 1110 00 000 0111122344432222 2356677766543221 1111 1 1
Q ss_pred cccCeEEEEECCCCcEEEEe--cCCeEEEEeCCCCCCceeeecCCC--------------------cCCCCcc-cCCCCC
Q psy12356 223 IISSISDVKISNSGRYMISR--DYLCVKVWDLHMESRPVETYPTHT--------------------KEENGQL-RDPSNI 279 (400)
Q Consensus 223 h~~~V~~v~fSpdg~~las~--~D~tIklWD~~~~~~~l~~~~~h~--------------------~~~~g~~-~~~~~~ 279 (400)
. .....+.+||||++++.+ .+++|.|||+.+- .+.|+++. +.++|.. .+..-+
T Consensus 257 g-ksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~---~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~d 332 (441)
T d1qnia2 257 P-KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKL---DDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFID 332 (441)
T ss_dssp B-SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGH---HHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTT
T ss_pred C-CCccCceECCCCCEEEEeCCcCCcEEEEEeehh---hhHhhccCCcceEEEeecccccCcccceecCCceEEEccccc
Confidence 1 234569999999998754 4899999998752 12222221 1112211 111222
Q ss_pred ceeecCcccccceeeccCccceeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeE
Q psy12356 280 TALRVPQIKPIELTVEASPRRIFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRI 358 (400)
Q Consensus 280 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i 358 (400)
..+..|++...- +.+...-...|.. ...-.|+.||...+.+.+|+|||++|+|. --.+=
T Consensus 333 s~v~kw~~~~~~--------~~~~~~~~~~v~~------------~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~d 392 (441)
T d1qnia2 333 SQVCKWNIADAI--------KHYNGDRVNYIRQ------------KLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKD 392 (441)
T ss_dssp TEEEEEEHHHHH--------HHHTTCCCCCEEE------------EEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGG
T ss_pred ceEEEeccchhh--------hhhccCCCceeEe------------ccccccCCCCCccccccccCCCCcEEEecCccccc
Confidence 233333221000 0000000000000 00012457999999999999999999996 21122
Q ss_pred EEEeCccC-CeeEEEEeecCCcccch
Q psy12356 359 NLWHLEIT-DQSFNIVDIKPTNMEEL 383 (400)
Q Consensus 359 ~lW~~~~~-~~~~~~~~~~~~~~~~~ 383 (400)
|.+++.-- -+..+++||.=.||+=+
T Consensus 393 r~~~~g~~~~~~~q~~~i~~~~~~~~ 418 (441)
T d1qnia2 393 RFLPVGPLHPENDQLIDISGEEMKLV 418 (441)
T ss_dssp GSCCCSSSCCEEEEEEECSSSSCEEE
T ss_pred cCcCCCCCCCccceeEEecCCeEEEE
Confidence 34443211 24578889888787643
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.04 E-value=1.1e-09 Score=106.40 Aligned_cols=114 Identities=12% Similarity=0.131 Sum_probs=80.2
Q ss_pred EEEEEeccCCceEEEeeCCCeEEEEEccCCCc---------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccc
Q psy12356 73 KIRWLRRKNQAHFLLSTNDQSFNIVDIKPTNM---------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 73 ~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~~---------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~ 143 (400)
.+.|.+++ .++. ..|+.|.+||+.+++. ..+...|.+++|+||+ +.||+++. ..++|...
T Consensus 21 ~~~W~~d~---~~~~-~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg-~~i~~~~~--~~~~~r~s---- 89 (470)
T d2bgra1 21 SLRWISDH---EYLY-KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYN--YVKQWRHS---- 89 (470)
T ss_dssp CCEECSSS---EEEE-ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTS-SEEEEEEE--EEECSSSC----
T ss_pred CCEeCCCC---EEEE-EcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCC-CEEEEEEC--Ccceeeec----
Confidence 47898876 5554 4578899999998862 2233568999999986 67777653 22333311
Q ss_pred cccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccc
Q psy12356 144 CDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEI 223 (400)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 223 (400)
.++.+.|||+.++... . +..|
T Consensus 90 ------------------------------------------~~~~~~l~d~~~~~~~-----~------------l~~~ 110 (470)
T d2bgra1 90 ------------------------------------------YTASYDIYDLNKRQLI-----T------------EERI 110 (470)
T ss_dssp ------------------------------------------EEEEEEEEETTTTEEC-----C------------SSCC
T ss_pred ------------------------------------------cCceEEEEECCCCccc-----c------------cccC
Confidence 1346777777765421 0 2245
Q ss_pred ccCeEEEEECCCCcEEEEecCCeEEEEeCCCCC
Q psy12356 224 ISSISDVKISNSGRYMISRDYLCVKVWDLHMES 256 (400)
Q Consensus 224 ~~~V~~v~fSpdg~~las~~D~tIklWD~~~~~ 256 (400)
...+..+.|||||++||...++.+.+|+..++.
T Consensus 111 ~~~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~ 143 (470)
T d2bgra1 111 PNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLP 143 (470)
T ss_dssp CTTEEEEEECSSTTCEEEEETTEEEEESSTTSC
T ss_pred CccccccccccCcceeeEeecccceEEECCCCc
Confidence 567899999999999998888899999999764
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.74 E-value=5e-08 Score=91.26 Aligned_cols=204 Identities=9% Similarity=-0.103 Sum_probs=104.9
Q ss_pred EEEECCCCCeEEEec-CCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE
Q psy12356 8 ASQRFSDGELLATGD-KGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL 86 (400)
Q Consensus 8 ~v~fspdG~~Las~s-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l 86 (400)
.++|||||++|+.++ .++.|.+||+.+. ++.+.+..+... .+.|.++ ..++
T Consensus 128 ~~a~SpDGk~l~va~~~~~~v~~~d~~~~-----------~~~~~~~~~~~~----------------~~~~~~~-~~~v 179 (368)
T d1mdah_ 128 IIGNCASSACLLFFLFGSSAAAGLSVPGA-----------SDDQLTKSASCF----------------HIHPGAA-ATHY 179 (368)
T ss_dssp SEEECTTSSCEEEEECSSSCEEEEEETTT-----------EEEEEEECSSCC----------------CCEEEET-TEEE
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECCCC-----------cEeEEeeccCcc----------------eEccCCC-ceEE
Confidence 588999999999876 4799999999863 234444433211 1223332 2455
Q ss_pred EeeCCCeEEEEEccCCCc----------ccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCcc
Q psy12356 87 LSTNDQSFNIVDIKPTNM----------EELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTN 156 (400)
Q Consensus 87 ~ss~D~tI~lWd~~~~~~----------~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~ 156 (400)
+.+.|+++.+|++..... ..+...+..+.+++++ ..+. ..++.+.++++..+...............
T Consensus 180 ~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 256 (368)
T d1mdah_ 180 LGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPG-MLVW--AVASSILQGDIPAAGATMKAAIDGNESGR 256 (368)
T ss_dssp CCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTT-EEEE--CBSSCCEEEECCSSCCEEECCCCSSCTHH
T ss_pred EEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCc-EEEE--ecCCCEEEEeecCCceEEEeeccccccee
Confidence 567788888888754431 1112233456677753 3332 34556666666555321100000000000
Q ss_pred cceeceeccCchhhhhhcccCc-ce-ee-------cCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCe
Q psy12356 157 CNCQGLIVPESKREERQSSQNR-RE-KE-------DNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSI 227 (400)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~-------~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 227 (400)
. .....++....+...+++ .. .. .......|.+||..+++... .+ .+...+
T Consensus 257 --~-~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~----~~-------------~~~~~~ 316 (368)
T d1mdah_ 257 --K-ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG----PI-------------SNGHDS 316 (368)
T ss_dssp --H-HTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE----CC-------------EEEEEE
T ss_pred --e-eeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeE----Ee-------------cCCCce
Confidence 0 000000000000001111 11 10 01123468899988765321 11 123468
Q ss_pred EEEEECCCCc-EE-EE-ecCCeEEEEeCCCCCCceeeec
Q psy12356 228 SDVKISNSGR-YM-IS-RDYLCVKVWDLHMESRPVETYP 263 (400)
Q Consensus 228 ~~v~fSpdg~-~l-as-~~D~tIklWD~~~~~~~l~~~~ 263 (400)
.+++|||||+ +| ++ ..|++|++||..++. .+++++
T Consensus 317 ~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk-~~~~i~ 354 (368)
T d1mdah_ 317 DAIIAAQDGASDNYANSAGTEVLDIYDAASDQ-DQSSVE 354 (368)
T ss_dssp CEEEECCSSSCEEEEEETTTTEEEEEESSSCE-EEEECC
T ss_pred eEEEECCCCCEEEEEEeCCCCeEEEEECCCCC-EEEEEE
Confidence 8999999997 33 34 368999999999874 577764
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.71 E-value=4e-06 Score=78.51 Aligned_cols=31 Identities=10% Similarity=0.070 Sum_probs=24.9
Q ss_pred CeEEEEECCCCcEEEE-e-cCCeEEEEeCCCCC
Q psy12356 226 SISDVKISNSGRYMIS-R-DYLCVKVWDLHMES 256 (400)
Q Consensus 226 ~V~~v~fSpdg~~las-~-~D~tIklWD~~~~~ 256 (400)
....++|+|||+++.. . .+++|.+||+..+.
T Consensus 194 gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~ 226 (365)
T d1jofa_ 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ceEEEEECCCCceEEEeccCCCEEEEEEecCCC
Confidence 4678999999998864 4 47999999998653
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.58 E-value=7e-05 Score=66.77 Aligned_cols=113 Identities=17% Similarity=0.198 Sum_probs=64.5
Q ss_pred cCeEEEEECCCCcEEEEe-cCCeEEEEeCCCCCCceeeecC--CCcCCCCcccCCCCCceeecCcccccceeeccCccce
Q psy12356 225 SSISDVKISNSGRYMISR-DYLCVKVWDLHMESRPVETYPT--HTKEENGQLRDPSNITALRVPQIKPIELTVEASPRRI 301 (400)
Q Consensus 225 ~~V~~v~fSpdg~~las~-~D~tIklWD~~~~~~~l~~~~~--h~~~~~g~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~ 301 (400)
.....+++.++|+++++. ..+.|+++|... ..+.++.. +...|.| | .+.++ ..+
T Consensus 157 ~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G--~~~~~~g~~g~~~~P~g----------i---avD~~--------G~i 213 (279)
T d1q7fa_ 157 EFPNGVVVNDKQEIFISDNRAHCVKVFNYEG--QYLRQIGGEGITNYPIG----------V---GINSN--------GEI 213 (279)
T ss_dssp SSEEEEEECSSSEEEEEEGGGTEEEEEETTC--CEEEEESCTTTSCSEEE----------E---EECTT--------CCE
T ss_pred cccceeeeccceeEEeeeccccceeeeecCC--ceeeeecccccccCCcc----------c---ccccC--------CeE
Confidence 456789999999988764 568999999873 35666621 1111111 1 01111 112
Q ss_pred ecc-ccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEecCCeEEEEeCcc
Q psy12356 302 FAN-AHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSADDLRINLWHLEI 365 (400)
Q Consensus 302 ~~~-~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~~D~~i~lW~~~~ 365 (400)
+.. ..... .-..|.|+|+++..-.. .........|++.|||+++++..+++|++|+.+.
T Consensus 214 ~Vad~~~~~-~v~~f~~~G~~~~~~~~----~~~~~~p~~vav~~dG~l~V~~~n~~v~~fr~~~ 273 (279)
T d1q7fa_ 214 LIADNHNNF-NLTIFTQDGQLISALES----KVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 273 (279)
T ss_dssp EEEECSSSC-EEEEECTTSCEEEEEEE----SSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEEECCCCc-EEEEECCCCCEEEEEeC----CCCCCCEeEEEEeCCCcEEEEeCCCeEEEEEeee
Confidence 111 11111 11246788876532110 1122346789999999977776788999999764
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.54 E-value=4.2e-05 Score=69.11 Aligned_cols=108 Identities=17% Similarity=0.204 Sum_probs=76.4
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
+..++++|||+++++...+++|+.|+... ... .+.... ..++.++|.|+++ .+
T Consensus 30 ~e~iAv~pdG~l~vt~~~~~~I~~i~p~g----------~~~---~~~~~~------------~~~~gla~~~dG~--l~ 82 (302)
T d2p4oa1 30 LENLASAPDGTIFVTNHEVGEIVSITPDG----------NQQ---IHATVE------------GKVSGLAFTSNGD--LV 82 (302)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTC----------CEE---EEEECS------------SEEEEEEECTTSC--EE
T ss_pred cCCEEECCCCCEEEEeCCCCEEEEEeCCC----------CEE---EEEcCC------------CCcceEEEcCCCC--eE
Confidence 67899999999999999999998888653 111 222222 3488999999873 55
Q ss_pred EEeeCCCeEEEEEccCCC--ccc-----ccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 86 LLSTNDQSFNIVDIKPTN--MEE-----LNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 86 l~ss~D~tI~lWd~~~~~--~~~-----~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
++...++.+..|+..+.. ... .....+.+++.+++ +++++.+.++.+..+|..++
T Consensus 83 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g-~~~v~~~~~~~i~~~~~~~~ 144 (302)
T d2p4oa1 83 ATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQP 144 (302)
T ss_dssp EEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTT
T ss_pred EEecCCceEEEEEecccccceeeccccCCccccceeEEccCC-CEEeeccccccceeeeccCC
Confidence 555567778888775543 111 12457889999975 78888888888888887765
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.46 E-value=6.3e-06 Score=77.08 Aligned_cols=78 Identities=9% Similarity=0.058 Sum_probs=50.4
Q ss_pred EEEEEECCCCCeEEEecC-CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGELLATGDK-GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
+.++.|+|||++|++++. ..+|++|+..... .......+....+ ......++|+|+++ .
T Consensus 147 ~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g--------~~~~~~~~~~~~~----------g~gPr~i~f~pdg~--~ 206 (365)
T d1jofa_ 147 IHGMVFDPTETYLYSADLTANKLWTHRKLASG--------EVELVGSVDAPDP----------GDHPRWVAMHPTGN--Y 206 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTS--------CEEEEEEEECSST----------TCCEEEEEECTTSS--E
T ss_pred ceEEEECCCCCEEEEeeCCCCEEEEEEccCCC--------ceeeccceeecCC----------CCceEEEEECCCCc--e
Confidence 578999999998888764 4588998865421 1111111111111 13578899999874 4
Q ss_pred EEE-eeCCCeEEEEEccCCC
Q psy12356 85 FLL-STNDQSFNIVDIKPTN 103 (400)
Q Consensus 85 ~l~-ss~D~tI~lWd~~~~~ 103 (400)
+.+ .-.+++|.+||++++.
T Consensus 207 ~yv~~e~~~~V~v~~~~~~~ 226 (365)
T d1jofa_ 207 LYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp EEEEETTTTEEEEEEECTTT
T ss_pred EEEeccCCCEEEEEEecCCC
Confidence 434 4468999999997654
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.43 E-value=2.4e-07 Score=88.95 Aligned_cols=111 Identities=13% Similarity=0.121 Sum_probs=69.3
Q ss_pred EEEECCCCcEEEEecCCeEEEEeCCCCCCceeeecC----CC--cCCCCccc--CCCCCceeecCcccccceeeccCccc
Q psy12356 229 DVKISNSGRYMISRDYLCVKVWDLHMESRPVETYPT----HT--KEENGQLR--DPSNITALRVPQIKPIELTVEASPRR 300 (400)
Q Consensus 229 ~v~fSpdg~~las~~D~tIklWD~~~~~~~l~~~~~----h~--~~~~g~~~--~~~~~~~i~l~~~~~~~~~~~~~~~~ 300 (400)
.++++|||+++..++++.+.|++.... ..++.+.. |. ..|||+++ ++..+.++.+|++...+.++.+
T Consensus 222 ~~~~~~dGk~~~v~~~~v~vvd~~~~~-~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~---- 296 (441)
T d1qnia2 222 IAAAVKAGNFKTIGDSKVPVVDGRGES-EFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFED---- 296 (441)
T ss_dssp HHHHHHTTCCBCCTTCCCCEEECSSSC-SSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTT----
T ss_pred eEEEecCCCEEEeCCCCcEEEEcccCC-ceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhc----
Confidence 356789999887777788888887754 34555543 32 47899964 5677788888887533222211
Q ss_pred eeccccccceEEEEEcCCCcEEeecccchhhcccccceeEEEEccCCCEEEEe-cCCeEEEEeCc
Q psy12356 301 IFANAHTYHINSISVNSDQLTVEASPRGIFADAHTYHISSTSVNSDQETYLSA-DDLRINLWHLE 364 (400)
Q Consensus 301 ~~~~~~~~~i~~i~~s~dg~~~~~~~~~~~~~gh~~~V~~i~fspDg~~las~-~D~~i~lW~~~ 364 (400)
+.....++...|.. .-.....+|.++|..+.|. -|..|..|+++
T Consensus 297 -----~~~~~~~~~~~~~~---------------glgplh~~fd~~g~~yts~~~ds~v~kw~~~ 341 (441)
T d1qnia2 297 -----KIELRDTIVAEPEL---------------GLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA 341 (441)
T ss_dssp -----SSCGGGGEEECCBC---------------CSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred -----cCCcceEEEeeccc---------------ccCcccceecCCceEEEcccccceEEEeccc
Confidence 11111122222110 1123456899999988886 59999999985
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.37 E-value=3.2e-05 Score=74.69 Aligned_cols=108 Identities=8% Similarity=0.063 Sum_probs=62.3
Q ss_pred EEEEEECCCCCeEEEe---------cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEE
Q psy12356 6 REASQRFSDGELLATG---------DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 76 (400)
Q Consensus 6 v~~v~fspdG~~Las~---------s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~ 76 (400)
+....|||||++|+.. +..+.+.|+|+.++. .+.+...... ...+....|
T Consensus 63 ~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~---------~~~l~~~~~~------------~~~l~~~~w 121 (465)
T d1xfda1 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD---------PQSLDPPEVS------------NAKLQYAGW 121 (465)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC---------CEECCCTTCC------------SCCCSBCCB
T ss_pred cceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCc---------eeeccCccCC------------ccccceeee
Confidence 4567899999998876 345788899988643 1111111110 122445679
Q ss_pred EeccCCceEEEeeCCCeEEEEEccCCCcccc----------------------cccEEEEEEecCCCCEEEEEeC-CCeE
Q psy12356 77 LRRKNQAHFLLSTNDQSFNIVDIKPTNMEEL----------------------NEVITAAEFHPIDCNLFVYSSS-KGTI 133 (400)
Q Consensus 77 sp~~~~~~~l~ss~D~tI~lWd~~~~~~~~~----------------------~~~V~sv~f~p~~~~~las~s~-Dg~i 133 (400)
|||+. .++.. .++.+.+.+..++....+ .+.-.++-||||| +.||.... +..+
T Consensus 122 SPDG~--~iafv-~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDg-k~iaf~~~D~s~V 197 (465)
T d1xfda1 122 GPKGQ--QLIFI-FENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRV 197 (465)
T ss_dssp CSSTT--CEEEE-ETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTS
T ss_pred ccCCc--eEEEE-ecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCC-CeEEEEEeccccc
Confidence 99985 44443 356677777655431100 0112467799986 67777654 4445
Q ss_pred EEEec
Q psy12356 134 RLCDM 138 (400)
Q Consensus 134 ~lWD~ 138 (400)
..+.+
T Consensus 198 ~~~~~ 202 (465)
T d1xfda1 198 PIMEL 202 (465)
T ss_dssp CEEEE
T ss_pred ceeec
Confidence 55544
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.36 E-value=9.3e-05 Score=64.66 Aligned_cols=29 Identities=24% Similarity=0.086 Sum_probs=19.3
Q ss_pred eEEEEEECCCCCeEEEecCC-C--eEEEEEcC
Q psy12356 5 MREASQRFSDGELLATGDKG-G--RVVIFQRD 33 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D-g--~I~iwd~~ 33 (400)
.+.+-+|||||++||-.+.. + .+.+.+..
T Consensus 40 ~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~ 71 (269)
T d2hqsa1 40 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLA 71 (269)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred ceeeeEECCCCCEEEEEEeeccCcceeeeecc
Confidence 35678999999999965433 3 34444544
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.11 E-value=0.00051 Score=59.70 Aligned_cols=55 Identities=11% Similarity=0.164 Sum_probs=34.2
Q ss_pred eeEEEEEeccCCceEEEeeC---CCeEEEEEccCCCcc---cccccEEEEEEecCCCCEEEEEe
Q psy12356 71 INKIRWLRRKNQAHFLLSTN---DQSFNIVDIKPTNME---ELNEVITAAEFHPIDCNLFVYSS 128 (400)
Q Consensus 71 V~~v~~sp~~~~~~~l~ss~---D~tI~lWd~~~~~~~---~~~~~V~sv~f~p~~~~~las~s 128 (400)
+.+-+|||||+ +++..+. ...+.+.+..++... ..........|+|++. .++..+
T Consensus 41 ~~sP~wSPDGk--~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~i~~~~ 101 (269)
T d2hqsa1 41 LMSPAWSPDGS--KLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGS-KLAFAL 101 (269)
T ss_dssp EEEEEECTTSS--EEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSS-EEEEEE
T ss_pred eeeeEECCCCC--EEEEEEeeccCcceeeeecccCceeEEeeeecccccceecCCCC-eeeEee
Confidence 66789999985 6665432 234555666655522 2345667889999864 555443
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.08 E-value=0.00061 Score=59.66 Aligned_cols=105 Identities=10% Similarity=0.043 Sum_probs=55.6
Q ss_pred EEEEEECCCCCeEEE-ecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 6 REASQRFSDGELLAT-GDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 6 v~~v~fspdG~~Las-~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
...|++++||++.++ .+..+.|..++..+.. .....+.+.. ....|++.+++ .
T Consensus 16 P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~-------------~p~gvav~~~g---~ 69 (260)
T d1rwia_ 16 PSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG----------TTVLPFNGLY-------------QPQGLAVDGAG---T 69 (260)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEEC----C----------EEECCCCSCC-------------SCCCEEECTTC---C
T ss_pred CCEEEEcCCCCEEEEEcCCCCEEEEEcCCCce----------EEEeccCCcc-------------CceEEEEcCCC---C
Confidence 578999999996554 4566788887765421 1111111111 13457787765 3
Q ss_pred EEEe-eCCCeEEEEEccCCCc-ccc--cccEEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy12356 85 FLLS-TNDQSFNIVDIKPTNM-EEL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCD 137 (400)
Q Consensus 85 ~l~s-s~D~tI~lWd~~~~~~-~~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD 137 (400)
+.++ ...+.+++++-.++.. ... .....++++++++ +++++-..+..+...+
T Consensus 70 i~v~d~~~~~i~~~~~~~~~~~~~~~~~~~p~~iavd~~g-~i~v~d~~~~~~~~~~ 125 (260)
T d1rwia_ 70 VYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLA 125 (260)
T ss_dssp EEEEETTTEEEEECTTCSCCEECCCCSCCSEEEEEECTTC-CEEEEEGGGTEEEEEC
T ss_pred EEEeeeeeceeeeeeeccceeeeeeeeeeecccccccccc-eeEeeccccccccccc
Confidence 4444 4556666665443331 111 2346788888864 5655544444444444
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.04 E-value=0.00023 Score=63.99 Aligned_cols=69 Identities=6% Similarity=0.077 Sum_probs=49.1
Q ss_pred eeeEEEEEeccCCceEEEeeCCCeEEEEEccCCC--cccccccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 70 KINKIRWLRRKNQAHFLLSTNDQSFNIVDIKPTN--MEELNEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 70 ~V~~v~~sp~~~~~~~l~ss~D~tI~lWd~~~~~--~~~~~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+..+++.||+. .+++...+++|..||..... +......+.+++|+|++ +++++...++.+..|+....
T Consensus 29 ~~e~iAv~pdG~--l~vt~~~~~~I~~i~p~g~~~~~~~~~~~~~gla~~~dG-~l~v~~~~~~~~~~~~~~~~ 99 (302)
T d2p4oa1 29 FLENLASAPDGT--IFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKS 99 (302)
T ss_dssp CEEEEEECTTSC--EEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTS-CEEEEEECTTSCEEEEEECT
T ss_pred CcCCEEECCCCC--EEEEeCCCCEEEEEeCCCCEEEEEcCCCCcceEEEcCCC-CeEEEecCCceEEEEEeccc
Confidence 367899999873 44455668888888755332 22334678999999985 78888888888888876554
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.99 E-value=0.0028 Score=57.08 Aligned_cols=100 Identities=12% Similarity=0.110 Sum_probs=58.2
Q ss_pred EEEEEECCCCCeEEEecC-------CCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEe
Q psy12356 6 REASQRFSDGELLATGDK-------GGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLR 78 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~-------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp 78 (400)
....+|.|||++.++... +|+|..||..++. .. .+...... ........++|.|
T Consensus 20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~---------~~---~~~~~~~~-------~~~g~P~Gl~~~~ 80 (314)
T d1pjxa_ 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK---------KT---VICKPEVN-------GYGGIPAGCQCDR 80 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC---------EE---EEECCEET-------TEECCEEEEEECS
T ss_pred CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCc---------EE---EEECCccc-------cCCCcceeEEEeC
Confidence 356789999998876433 4678888876532 11 11110000 0001245788988
Q ss_pred ccCCceEEEeeCCCeEEEEEccCCCcc----ccc----ccEEEEEEecCCCCEEEEE
Q psy12356 79 RKNQAHFLLSTNDQSFNIVDIKPTNME----ELN----EVITAAEFHPIDCNLFVYS 127 (400)
Q Consensus 79 ~~~~~~~l~ss~D~tI~lWd~~~~~~~----~~~----~~V~sv~f~p~~~~~las~ 127 (400)
+++ .+.++.....|...|.+++... ... ...+.++|+|+| +++++-
T Consensus 81 dg~--~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G-~lyvtd 134 (314)
T d1pjxa_ 81 DAN--QLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITA 134 (314)
T ss_dssp SSS--EEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEE
T ss_pred CCC--EEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCC-CEEEec
Confidence 763 5666655566888887655311 111 125778999985 677764
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=97.84 E-value=0.0065 Score=54.62 Aligned_cols=95 Identities=14% Similarity=0.159 Sum_probs=55.1
Q ss_pred EEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceE
Q psy12356 6 REASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHF 85 (400)
Q Consensus 6 v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~ 85 (400)
+..++|+++|++.++-..+++|..|+.++.. ....+.... .....+++.|++. .+
T Consensus 42 lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~-----------~~~~~~~~~------------~~p~gla~~~dG~--l~ 96 (319)
T d2dg1a1 42 LEGLNFDRQGQLFLLDVFEGNIFKINPETKE-----------IKRPFVSHK------------ANPAAIKIHKDGR--LF 96 (319)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCC-----------EEEEEECSS------------SSEEEEEECTTSC--EE
T ss_pred cEeCEECCCCCEEEEECCCCEEEEEECCCCe-----------EEEEEeCCC------------CCeeEEEECCCCC--EE
Confidence 3578999999988888789999888876431 111222111 2367889988763 44
Q ss_pred EEeeC--CCeEEEEEc--cCCCccc---c---cccEEEEEEecCCCCEEEE
Q psy12356 86 LLSTN--DQSFNIVDI--KPTNMEE---L---NEVITAAEFHPIDCNLFVY 126 (400)
Q Consensus 86 l~ss~--D~tI~lWd~--~~~~~~~---~---~~~V~sv~f~p~~~~~las 126 (400)
++... .....++.+ .++.+.. . ....+.+.+.|+| +++++
T Consensus 97 va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G-~l~vt 146 (319)
T d2dg1a1 97 VCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKG-GFYFT 146 (319)
T ss_dssp EEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTS-CEEEE
T ss_pred EEecCCCccceeEEEEcCCCceeeeeccCCCcccCCcceeEEecc-ceeec
Confidence 44322 234444444 3333211 1 1236778888875 55555
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.69 E-value=0.003 Score=56.90 Aligned_cols=208 Identities=10% Similarity=0.065 Sum_probs=107.4
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
....++|+|||++|..++....|...+.++.. . .+.....+...+ ...+.+++.|++. .
T Consensus 72 ~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~----------~---~~~~~~~~g~~~------~~pndl~~d~~G~--l 130 (314)
T d1pjxa_ 72 IPAGCQCDRDANQLFVADMRLGLLVVQTDGTF----------E---EIAKKDSEGRRM------QGCNDCAFDYEGN--L 130 (314)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEETTSCE----------E---ECCSBCTTSCBC------BCCCEEEECTTSC--E
T ss_pred cceeEEEeCCCCEEEEEECCCeEEEEeCCCcE----------E---EEEecccccccc------CCCcEEEECCCCC--E
Confidence 45679999999988888877888888876421 0 111111000000 1256788887763 4
Q ss_pred EEEeeC-------------CCeEEEEEccC-CCcccc---cccEEEEEEecCCC----CEEEEEeCCCeEEEEecccccc
Q psy12356 85 FLLSTN-------------DQSFNIVDIKP-TNMEEL---NEVITAAEFHPIDC----NLFVYSSSKGTIRLCDMRAAAL 143 (400)
Q Consensus 85 ~l~ss~-------------D~tI~lWd~~~-~~~~~~---~~~V~sv~f~p~~~----~~las~s~Dg~i~lWD~~~~~~ 143 (400)
+++-.. ...=+||.++. ++.... ...-+.++|+|++. .++++-+..+.|..+|+.....
T Consensus 131 yvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~ 210 (314)
T d1pjxa_ 131 WITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAK 210 (314)
T ss_dssp EEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTE
T ss_pred EEecCccCcccccccceeccCCceEEEEeecCceeEeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccc
Confidence 444211 11234555432 332111 11236889999753 2566667788898888765422
Q ss_pred cccccceeccCcccceeceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCccccccc
Q psy12356 144 CDRHSKCLIEGTNCNCQGLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEI 223 (400)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 223 (400)
+... ........... ...+++..-.++....+....+.|..||...+... ..+. ..
T Consensus 211 ~~~~-~~~~~~~~~~~-------~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~----~~i~------------~p 266 (314)
T d1pjxa_ 211 IENK-KVWGHIPGTHE-------GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPK----MRIR------------CP 266 (314)
T ss_dssp EEEE-EEEEECCCCSS-------CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCS----EEEE------------CS
T ss_pred ccee-eEEEEcccccc-------ccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEE----EEEE------------CC
Confidence 1100 00000000000 00011111123333333334678888887654321 1111 11
Q ss_pred ccCeEEEEECCCCcEE-EE-ecCCeEEEEeCCCCCC
Q psy12356 224 ISSISDVKISNSGRYM-IS-RDYLCVKVWDLHMESR 257 (400)
Q Consensus 224 ~~~V~~v~fSpdg~~l-as-~~D~tIklWD~~~~~~ 257 (400)
.....+|+|.||++.| ++ +..++|.-.|+...+.
T Consensus 267 ~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G~ 302 (314)
T d1pjxa_ 267 FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNGK 302 (314)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCBC
T ss_pred CCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCCCh
Confidence 2457899999999855 45 4568888888776553
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.68 E-value=0.0023 Score=56.39 Aligned_cols=110 Identities=11% Similarity=0.171 Sum_probs=68.4
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
+....+++.++|+++++....+.+.+++.+. +++.++..... -.....+++.++++
T Consensus 114 ~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g------------~~~~~~g~~~~----------~~~~~~i~~d~~g~-- 169 (279)
T d1q7fa_ 114 QHPRGVTVDNKGRIIVVECKVMRVIIFDQNG------------NVLHKFGCSKH----------LEFPNGVVVNDKQE-- 169 (279)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTS------------CEEEEEECTTT----------CSSEEEEEECSSSE--
T ss_pred cccceeccccCCcEEEEeeccceeeEeccCC------------ceeeccccccc----------ccccceeeecccee--
Confidence 4467788888998888777777888887652 22334422111 12356677766542
Q ss_pred eEEEeeCCCeEEEEEccCCCccc-----ccccEEEEEEecCCCCEEEEEeC-CCeEEEEec
Q psy12356 84 HFLLSTNDQSFNIVDIKPTNMEE-----LNEVITAAEFHPIDCNLFVYSSS-KGTIRLCDM 138 (400)
Q Consensus 84 ~~l~ss~D~tI~lWd~~~~~~~~-----~~~~V~sv~f~p~~~~~las~s~-Dg~i~lWD~ 138 (400)
.+++....+.|+++|.+...+.. ......++++.|+| +++++-.. ++.|.+++.
T Consensus 170 i~v~d~~~~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G-~i~Vad~~~~~~v~~f~~ 229 (279)
T d1q7fa_ 170 IFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQ 229 (279)
T ss_dssp EEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECT
T ss_pred EEeeeccccceeeeecCCceeeeecccccccCCcccccccCC-eEEEEECCCCcEEEEECC
Confidence 44445667899999975443221 12345788999986 67776544 456888874
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.48 E-value=0.0047 Score=53.70 Aligned_cols=191 Identities=6% Similarity=-0.034 Sum_probs=103.0
Q ss_pred eEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCce
Q psy12356 5 MREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAH 84 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~ 84 (400)
....|+++++|++.++....+.|++++-.+.. ....+.+. ..+..|++.++++ .
T Consensus 58 ~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~-----------~~~~~~~~-------------~~p~~iavd~~g~--i 111 (260)
T d1rwia_ 58 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ-----------TVLPFDGL-------------NYPEGLAVDTQGA--V 111 (260)
T ss_dssp SCCCEEECTTCCEEEEETTTEEEEECTTCSCC-----------EECCCCSC-------------CSEEEEEECTTCC--E
T ss_pred CceEEEEcCCCCEEEeeeeeceeeeeeeccce-----------eeeeeeee-------------eecccccccccce--e
Confidence 45678999999988888777777766543221 11111111 2256788877652 3
Q ss_pred EEEeeCCCeEEEEEccCCCcc--cc--cccEEEEEEecCCCCEEEEEeCCCeEEEEecccccccccccceeccCccccee
Q psy12356 85 FLLSTNDQSFNIVDIKPTNME--EL--NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAAALCDRHSKCLIEGTNCNCQ 160 (400)
Q Consensus 85 ~l~ss~D~tI~lWd~~~~~~~--~~--~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
+++-.....+...+....... .. .....+++++|++ +++++...++.|..+|........ ..........
T Consensus 112 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g-~~~v~~~~~~~i~~~d~~~~~~~~-----~~~~~~~~p~ 185 (260)
T d1rwia_ 112 YVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQVV-----LPFTDITAPW 185 (260)
T ss_dssp EEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTC-CEEEEEGGGTEEEEECTTTCCEEE-----CCCSSCCSEE
T ss_pred EeeccccccccccccccceeeeeeecccCCcceeeecCCC-CEeeeccccccccccccccceeee-----eeccccCCCc
Confidence 333334555666665443321 11 1234688999975 788888888899999987652210 0000001112
Q ss_pred ceeccCchhhhhhcccCcceeecCCCCCeEEEeecccccccCcccccccCCCCCCCcccccccccCeEEEEECCCCcEEE
Q psy12356 161 GLIVPESKREERQSSQNRREKEDNRRKPAIRLCDMRAAALCDRHSKFFEEPEDPTNKSFFSEIISSISDVKISNSGRYMI 240 (400)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fSpdg~~la 240 (400)
++.+. +++....+....+.|..++...... ..+. .........|+++++|++++
T Consensus 186 gi~~d----------~~g~l~vsd~~~~~i~~~~~~~~~~-----~~~~-----------~~~~~~P~~i~~d~~g~l~v 239 (260)
T d1rwia_ 186 GIAVD----------EAGTVYVTEHNTNQVVKLLAGSTTS-----TVLP-----------FTGLNTPLAVAVDSDRTVYV 239 (260)
T ss_dssp EEEEC----------TTCCEEEEETTTTEEEEECTTCSCC-----EECC-----------CCSCCCEEEEEECTTCCEEE
T ss_pred cceee----------eeeeeeeeecCCCEEEEEeCCCCeE-----EEEc-----------cCCCCCeEEEEEeCCCCEEE
Confidence 22221 2333344444556666665432211 1110 01113457899999999887
Q ss_pred E-ecCCeEEEEeCC
Q psy12356 241 S-RDYLCVKVWDLH 253 (400)
Q Consensus 241 s-~~D~tIklWD~~ 253 (400)
+ ..++.|+..+..
T Consensus 240 ad~~~~rI~~i~~~ 253 (260)
T d1rwia_ 240 ADRGNDRVVKLTSL 253 (260)
T ss_dssp EEGGGTEEEEECCC
T ss_pred EECCCCEEEEEeCC
Confidence 7 455666655554
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.47 E-value=0.0077 Score=51.81 Aligned_cols=90 Identities=13% Similarity=0.124 Sum_probs=55.7
Q ss_pred ECCC--CCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEe
Q psy12356 11 RFSD--GELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLS 88 (400)
Q Consensus 11 fspd--G~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~s 88 (400)
.||| |++||-.+ +|.|++.|+.++. .+.+..+. ..+...+||||+. .++..
T Consensus 6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g~------------~~~Lt~~~------------~~~~~p~~SPDG~--~iaf~ 58 (281)
T d1k32a2 6 LNPDIHGDRIIFVC-CDDLWEHDLKSGS------------TRKIVSNL------------GVINNARFFPDGR--KIAIR 58 (281)
T ss_dssp EEEEEETTEEEEEE-TTEEEEEETTTCC------------EEEEECSS------------SEEEEEEECTTSS--EEEEE
T ss_pred cCCCCCCCEEEEEe-CCcEEEEECCCCC------------EEEEecCC------------CcccCEEECCCCC--EEEEE
Confidence 5799 99999765 4578888988643 12233332 2366789999985 56643
Q ss_pred e----CCC--eEEEEEccCCCccccc----------ccEEEEEEecCCCCEEEEEe
Q psy12356 89 T----NDQ--SFNIVDIKPTNMEELN----------EVITAAEFHPIDCNLFVYSS 128 (400)
Q Consensus 89 s----~D~--tI~lWd~~~~~~~~~~----------~~V~sv~f~p~~~~~las~s 128 (400)
+ .+. .|.+.+..+++...++ ......+|+|++ +.++...
T Consensus 59 ~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg-~~l~~~~ 113 (281)
T d1k32a2 59 VMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDG-NLIISTD 113 (281)
T ss_dssp EEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTC-CEEEEEC
T ss_pred EeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCC-CEEEEEE
Confidence 2 222 4666677776533221 234678899986 5666653
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.0035 Score=59.85 Aligned_cols=108 Identities=14% Similarity=0.243 Sum_probs=67.5
Q ss_pred EEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEEEe
Q psy12356 9 SQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFLLS 88 (400)
Q Consensus 9 v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l~s 88 (400)
..|.+|+.++.. ..+|.|.+||+.++.. +.+ +..++- . ...+....||||+. .++.+
T Consensus 22 ~~W~~~~~~~~~-~~~g~i~~~~~~~~~~---------~~l--~~~~~~-----~----~~~~~~~~~SpD~~--~vl~~ 78 (465)
T d1xfda1 22 AKWISDTEFIYR-EQKGTVRLWNVETNTS---------TVL--IEGKKI-----E----SLRAIRYEISPDRE--YALFS 78 (465)
T ss_dssp CCBSSSSCBCCC-CSSSCEEEBCGGGCCC---------EEE--ECTTTT-----T----TTTCSEEEECTTSS--EEEEE
T ss_pred CEEeCCCcEEEE-eCCCcEEEEECCCCCE---------EEE--EcCccc-----c----ccccceeEECCCCC--eEEEE
Confidence 468888887754 4578999999876431 111 111110 0 01255678999874 45544
Q ss_pred ---------eCCCeEEEEEccCCCcccc------cccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 89 ---------TNDQSFNIVDIKPTNMEEL------NEVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 89 ---------s~D~tI~lWd~~~~~~~~~------~~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
+..+.+.|+|+.++..+.+ ...+....|+|+| +.+|... ++.|.+.+..++
T Consensus 79 ~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG-~~iafv~-~~nl~~~~~~~~ 144 (465)
T d1xfda1 79 YNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG-QQLIFIF-ENNIYYCAHVGK 144 (465)
T ss_dssp ESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST-TCEEEEE-TTEEEEESSSSS
T ss_pred EcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCC-ceEEEEe-cceEEEEecCCC
Confidence 2356889999998875332 2234557899986 5677765 566777776655
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=97.16 E-value=0.015 Score=52.08 Aligned_cols=116 Identities=9% Similarity=0.070 Sum_probs=63.4
Q ss_pred eEEEEEECCCCCeEEEecCC--CeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCC
Q psy12356 5 MREASQRFSDGELLATGDKG--GRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQ 82 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~s~D--g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~ 82 (400)
....++|+|||+++++...+ ....++...... +. +..+..+... ...++.+.+.|++.
T Consensus 83 ~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~-------~~---~~~~~~~~~~---------~~~~nd~~~d~~G~- 142 (319)
T d2dg1a1 83 NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG-------DN---LQDIIEDLST---------AYCIDDMVFDSKGG- 142 (319)
T ss_dssp SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS-------CS---CEEEECSSSS---------CCCEEEEEECTTSC-
T ss_pred CeeEEEECCCCCEEEEecCCCccceeEEEEcCCC-------ce---eeeeccCCCc---------ccCCcceeEEeccc-
Confidence 46789999999988765432 334444443211 01 1111111110 12367788888763
Q ss_pred ceEEEeeC----C--CeEEEEEccCCCccccc---ccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 83 AHFLLSTN----D--QSFNIVDIKPTNMEELN---EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 83 ~~~l~ss~----D--~tI~lWd~~~~~~~~~~---~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
.+++... + +.+..++.+.+...... ..-+.++|+|++..++++-+..+.|..+|+...
T Consensus 143 -l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~ 209 (319)
T d2dg1a1 143 -FYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDD 209 (319)
T ss_dssp -EEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred -eeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCC
Confidence 3443211 1 23444444433332221 234789999987556677777899999998654
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.64 E-value=0.019 Score=49.11 Aligned_cols=27 Identities=11% Similarity=0.229 Sum_probs=22.0
Q ss_pred EEECCCCcEEEEecCCeEEEEeCCCCC
Q psy12356 230 VKISNSGRYMISRDYLCVKVWDLHMES 256 (400)
Q Consensus 230 v~fSpdg~~las~~D~tIklWD~~~~~ 256 (400)
-.|||||+.|+-..++.|.++|+.++.
T Consensus 238 ~~~SpDG~~I~f~~~~~l~~~d~~~g~ 264 (281)
T d1k32a2 238 RHLNTDGRRILFSKGGSIYIFNPDTEK 264 (281)
T ss_dssp EEEEESSSCEEEEETTEEEEECTTTCC
T ss_pred ccCcCCCCEEEEEeCCEEEEEECCCCC
Confidence 468999999986666789999998763
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.02 E-value=0.25 Score=43.16 Aligned_cols=115 Identities=12% Similarity=0.148 Sum_probs=70.1
Q ss_pred eeEEEEEECCCCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCc
Q psy12356 4 YMREASQRFSDGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQA 83 (400)
Q Consensus 4 ~~v~~v~fspdG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~ 83 (400)
..+.++++.+||++++++ .+ -+.++|..+++ .+.+.......+ ...++.+...|++.
T Consensus 59 ~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg~---------~~~l~~~~~~~~----------~~~~nd~~vd~~G~-- 115 (295)
T d2ghsa1 59 FMGSALAKISDSKQLIAS-DD-GLFLRDTATGV---------LTLHAELESDLP----------GNRSNDGRMHPSGA-- 115 (295)
T ss_dssp SCEEEEEEEETTEEEEEE-TT-EEEEEETTTCC---------EEEEECSSTTCT----------TEEEEEEEECTTSC--
T ss_pred CCcEEEEEecCCCEEEEE-eC-ccEEeecccce---------eeEEeeeecCCC----------cccceeeEECCCCC--
Confidence 457889999999888764 34 58889987642 122211111111 12477888877662
Q ss_pred eEEEee----CCCeEEEEEccCCCccccc---ccEEEEEEecCCCCEEEEEeCCCeEEEEecccc
Q psy12356 84 HFLLST----NDQSFNIVDIKPTNMEELN---EVITAAEFHPIDCNLFVYSSSKGTIRLCDMRAA 141 (400)
Q Consensus 84 ~~l~ss----~D~tI~lWd~~~~~~~~~~---~~V~sv~f~p~~~~~las~s~Dg~i~lWD~~~~ 141 (400)
..++.. ..+.-.+|.+..++..... ..-+.++|+|++..++++-+..+.|..+++...
T Consensus 116 iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~ 180 (295)
T d2ghsa1 116 LWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDAR 180 (295)
T ss_dssp EEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTT
T ss_pred EEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEeeeccc
Confidence 333332 1234567777776532221 234789999987666777777888988887543
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=93.75 E-value=1.3 Score=40.72 Aligned_cols=28 Identities=11% Similarity=0.084 Sum_probs=23.3
Q ss_pred eEEEEECCCCcEEEEec--CCeEEEEeCCC
Q psy12356 227 ISDVKISNSGRYMISRD--YLCVKVWDLHM 254 (400)
Q Consensus 227 V~~v~fSpdg~~las~~--D~tIklWD~~~ 254 (400)
...|.+||||++++.++ +.++-|.|++.
T Consensus 277 PHGV~vSPDGKyi~VaGKLs~tVSViD~~K 306 (459)
T d1fwxa2 277 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTR 306 (459)
T ss_dssp CCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred CCceEECCCCCEEEEeCCcCCcEEEEEehh
Confidence 45689999999998654 89999999973
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=90.93 E-value=4.2 Score=34.71 Aligned_cols=198 Identities=9% Similarity=0.043 Sum_probs=105.1
Q ss_pred EEEECC-CCCeEEEecCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEeccCCceEE
Q psy12356 8 ASQRFS-DGELLATGDKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRRKNQAHFL 86 (400)
Q Consensus 8 ~v~fsp-dG~~Las~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~~~~~~~l 86 (400)
...|++ +|++..+=-..++|.-||..++. ...+.- ...+.++++.+++ .++
T Consensus 22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~------------~~~~~~-------------~~~~~~i~~~~dg---~l~ 73 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILERELHELHLASGR------------KTVHAL-------------PFMGSALAKISDS---KQL 73 (295)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTE------------EEEEEC-------------SSCEEEEEEEETT---EEE
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCe------------EEEEEC-------------CCCcEEEEEecCC---CEE
Confidence 455776 44444444456788888876532 112211 1236778887765 677
Q ss_pred EeeCCCeEEEEEccCCCcccc--------cccEEEEEEecCCCCEEEEEeCC----CeEEEEecccccccccccceeccC
Q psy12356 87 LSTNDQSFNIVDIKPTNMEEL--------NEVITAAEFHPIDCNLFVYSSSK----GTIRLCDMRAAALCDRHSKCLIEG 154 (400)
Q Consensus 87 ~ss~D~tI~lWd~~~~~~~~~--------~~~V~sv~f~p~~~~~las~s~D----g~i~lWD~~~~~~~~~~~~~~~~~ 154 (400)
+++.+ -+.++|.++++...+ ...++.+.+.|+| ++.++...+ +.-.+|.+..++.... ...+
T Consensus 74 va~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G-~iw~~~~~~~~~~~~g~l~~~~~g~~~~~----~~~~ 147 (295)
T d2ghsa1 74 IASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVAKGKVTKL----FADI 147 (295)
T ss_dssp EEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEETTEEEEE----EEEE
T ss_pred EEEeC-ccEEeecccceeeEEeeeecCCCcccceeeEECCCC-CEEEEeccccccccceeEeeecCCcEEEE----eecc
Confidence 76655 488899988874321 1247889999985 666654332 2345666655532110 0000
Q ss_pred cccceeceeccCchhhhhhcccCc-ceeecCCCCCeEEEeeccccccc-CcccccccCCCCCCCcccccccccCeEEEEE
Q psy12356 155 TNCNCQGLIVPESKREERQSSQNR-REKEDNRRKPAIRLCDMRAAALC-DRHSKFFEEPEDPTNKSFFSEIISSISDVKI 232 (400)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~i~lWD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~f 232 (400)
. ...++ ..++++ ....+.+..+.|..+++...... ......+.. +.+-.+....+++
T Consensus 148 ~--~~Ng~----------~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~---------~~~~~g~pdG~~v 206 (295)
T d2ghsa1 148 S--IPNSI----------CFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFID---------STGIKGGMDGSVC 206 (295)
T ss_dssp S--SEEEE----------EECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEE---------CTTSSSEEEEEEE
T ss_pred C--Cccee----------eecCCCceEEEeecccceeeEeeecccccccccceEEEec---------cCcccccccceEE
Confidence 0 00111 122333 23344456778888776432111 010011100 0112245678999
Q ss_pred CCCCcEEEEe-cCCeEEEEeCCCCCCceeee
Q psy12356 233 SNSGRYMISR-DYLCVKVWDLHMESRPVETY 262 (400)
Q Consensus 233 Spdg~~las~-~D~tIklWD~~~~~~~l~~~ 262 (400)
.++|++-++. ..+.|..+|-. + ..+..+
T Consensus 207 D~~GnlWva~~~~g~V~~~dp~-G-~~~~~i 235 (295)
T d2ghsa1 207 DAEGHIWNARWGEGAVDRYDTD-G-NHIARY 235 (295)
T ss_dssp CTTSCEEEEEETTTEEEEECTT-C-CEEEEE
T ss_pred cCCCCEEeeeeCCCceEEecCC-C-cEeeEe
Confidence 9999987765 56788888865 3 345444
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=84.54 E-value=5 Score=36.22 Aligned_cols=109 Identities=13% Similarity=0.089 Sum_probs=59.4
Q ss_pred eEEEEEECCCCCeEEEe-----cCCCeEEEEEcCCCCccccCCCCcceeeeeeeccCcchhhcccccccceeeEEEEEec
Q psy12356 5 MREASQRFSDGELLATG-----DKGGRVVIFQRDPLSKTSIPKRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLRR 79 (400)
Q Consensus 5 ~v~~v~fspdG~~Las~-----s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~v~~sp~ 79 (400)
.+..+++||||++||-+ +.-.+++++|+.+++ . +-..+..- +...++|.+|
T Consensus 126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~---------~-~~~~i~~~--------------~~~~~~W~~D 181 (430)
T d1qfma1 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK---------E-LPDVLERV--------------KFSCMAWTHD 181 (430)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE---------E-EEEEEEEE--------------CSCCEEECTT
T ss_pred eecceEecCCCCEEEEEeccccCchheeEEeccCcce---------e-cccccccc--------------cccceEEcCC
Confidence 34567889999999932 233579999998752 1 00111110 1235789887
Q ss_pred cCCceEEEeeC----------------CCeEEEEEccCCCc------ccc--cccEEEEEEecCCCCEEEEEeC--CCeE
Q psy12356 80 KNQAHFLLSTN----------------DQSFNIVDIKPTNM------EEL--NEVITAAEFHPIDCNLFVYSSS--KGTI 133 (400)
Q Consensus 80 ~~~~~~l~ss~----------------D~tI~lWd~~~~~~------~~~--~~~V~sv~f~p~~~~~las~s~--Dg~i 133 (400)
+. .++-... ...|.+|.+.+..- ... ...+..+..++++..++++.+. +...
T Consensus 182 ~~--~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~ 259 (430)
T d1qfma1 182 GK--GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVN 259 (430)
T ss_dssp SS--EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCC
T ss_pred CC--EEEEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccE
Confidence 64 3433221 12577777765531 111 1245677788876544444433 4455
Q ss_pred EEEecc
Q psy12356 134 RLCDMR 139 (400)
Q Consensus 134 ~lWD~~ 139 (400)
.+|-+.
T Consensus 260 ~~~~~d 265 (430)
T d1qfma1 260 RLWYCD 265 (430)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 555443
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=80.58 E-value=12 Score=32.67 Aligned_cols=32 Identities=9% Similarity=0.061 Sum_probs=25.0
Q ss_pred cceeEEEEccCCCEEEEe--cCCeEEEEeCccCC
Q psy12356 336 YHISSTSVNSDQETYLSA--DDLRINLWHLEITD 367 (400)
Q Consensus 336 ~~V~~i~fspDg~~las~--~D~~i~lW~~~~~~ 367 (400)
...|-|++|||+++|.-+ ..++|+.++++...
T Consensus 206 ~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~ 239 (340)
T d1v04a_ 206 DFANGINISPDGKYVYIAELLAHKIHVYEKHANW 239 (340)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence 467889999999977665 47789999887543
|