Psyllid ID: psy1257

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-----
Protein Sequence
MSECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP
Secondary Structure (PSIPRED)
ccHHHHHccHHHHHcccccccccccHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHccccccHHHHHHccccccccccccccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
msecreniPTVLQTLCekctpsqtdKAVMVIRRLKKDYPEEWKILLEkwdpkgeyTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEdlkkesnpdVIEEKARFIYEDYIsilspkevtqdp
Flexible Loop (DISEMBL)
msecreniPTVLqtlcekctpsqtdkaVMVIRRlkkdypeewkillekwdpkgeyTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYIsilspkevtqdp
Low Complexity Region (SEG)
MSECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP
Disordered region (IsUnstruct)
*******IPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISIL*********
Disordered Region (DISOPRED)
**ECRENIP*******************************************GEYTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLK*************FIYEDYISILSPKEVTQD*
Disordered Region (DISEMBL)
MSECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP
Disordered Region (DISPRO)
*****ENIPTVLQTLCEKCTPSQ***********K*DYPEEWKILLEKWDPKGEYTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEV****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	125	2.2.26 [Sep-21-2011]
Q9UGC6	210	Regulator of G-protein si	yes	N/A	0.68	0.404	0.604	1e-21
Q9PWA0	210	Regulator of G-protein si	yes	N/A	0.456	0.271	0.842	2e-21
Q9QZB0	210	Regulator of G-protein si	yes	N/A	0.68	0.404	0.571	1e-20
Q9PWA1	218	Regulator of G-protein si	no	N/A	0.44	0.252	0.8	5e-20
Q08DC7	223	Regulator of G-protein si	no	N/A	0.448	0.251	0.75	3e-19
O76081	388	Regulator of G-protein si	no	N/A	0.44	0.141	0.781	4e-19
P79348	374	Regulator of G-protein si	no	N/A	0.44	0.147	0.781	5e-19
Q9QZB1	239	Regulator of G-protein si	no	N/A	0.44	0.230	0.763	5e-19
P49795	217	Regulator of G-protein si	no	N/A	0.448	0.258	0.732	8e-19
Q9CX84	216	Regulator of G-protein si	no	N/A	0.448	0.259	0.732	9e-19

>sp|Q9UGC6|RGS17_HUMAN Regulator of G-protein signaling 17 OS=Homo sapiens GN=RGS17 PE=1 SV=2

 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 62/91 (68%), Gaps = 6/91 (6%)

Query: 40  EEWKILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLK 93
           E  ++L E  +P  E    + + F    K      LFREFLR EYSEEN+LFWLACEDLK
Sbjct: 62  ESIQVLEECQNPTAEEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLK 121

Query: 94  KESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           KE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct: 122 KEQNKKVIEEKARMIYEDYISILSPKEVSLD 152

Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins.
Homo sapiens (taxid: 9606)

>sp|Q9PWA0|RGS17_CHICK Regulator of G-protein signaling 17 OS=Gallus gallus GN=RGS17 PE=2 SV=1

 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 50/57 (87%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
            LFREFLR EYSEEN+LFWLACEDLKKE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct: 96  NLFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARLIYEDYISILSPKEVSLD 152

Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins.

Gallus gallus (taxid: 9031)

>sp|Q9QZB0|RGS17_MOUSE Regulator of G-protein signaling 17 OS=Mus musculus GN=Rgs17 PE=1 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 61/91 (67%), Gaps = 6/91 (6%)

Query: 40  EEWKILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLK 93
           E  ++L E  +P  +    + + F    K      LFREFLR EYSEEN+LFWLACEDLK
Sbjct: 62  ESIQVLEECQNPTADEVLSWSQNFDKMMKTPAGRNLFREFLRTEYSEENLLFWLACEDLK 121

Query: 94  KESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           KE N   +EEKAR IYEDYISILSPKEV+ D
Sbjct: 122 KEQNKKAVEEKARMIYEDYISILSPKEVSLD 152

Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins.

Mus musculus (taxid: 10090)

>sp|Q9PWA1|RGS20_CHICK Regulator of G-protein signaling 20 OS=Gallus gallus GN=RGS20 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 50/55 (90%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           FREFLR E+SEEN+LFW+ACE+LK+ESN  VIEEKAR IYEDYISILSPKEV+ D
Sbjct: 106 FREFLRTEFSEENMLFWMACEELKQESNKSVIEEKARLIYEDYISILSPKEVSLD 160

Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins.

Gallus gallus (taxid: 9031)

>sp|Q08DC7|RGS19_BOVIN Regulator of G-protein signaling 19 OS=Bos taurus GN=RGS19 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/56 (75%), Positives = 50/56 (89%)

Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +FREFLR EYSEEN+LFWLACE+LK E+N  V++EKAR IYEDY+SILSPKEV+ D
Sbjct: 109 VFREFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLD 164

Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G-alpha subfamily 1 members, with the order G(i)a3 > G(i)a1 > G(o)a >> G(z)a/G(i)a2. Activity on G(z)-alpha is inhibited by phosphorylation and palmitoylation of the G-protein.

Bos taurus (taxid: 9913)

>sp|O76081|RGS20_HUMAN Regulator of G-protein signaling 20 OS=Homo sapiens GN=RGS20 PE=1 SV=4

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/55 (78%), Positives = 51/55 (92%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           FREFLR E+SEEN+LFW+ACE+LKKE+N ++IEEKAR IYEDYISILSPKEV+ D
Sbjct: 276 FREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSLD 330

Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins.

Homo sapiens (taxid: 9606)

>sp|P79348|RGS20_BOVIN Regulator of G-protein signaling 20 OS=Bos taurus GN=RGS20 PE=1 SV=2

 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           FREFLR E+SEEN+LFW+ACE+LKKE+N   IEEKAR IYEDYISILSPKEV+ D
Sbjct: 262 FREFLRTEFSEENMLFWMACEELKKEANKATIEEKARIIYEDYISILSPKEVSLD 316

Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins.

Bos taurus (taxid: 9913)

>sp|Q9QZB1|RGS20_MOUSE Regulator of G-protein signaling 20 OS=Mus musculus GN=Rgs20 PE=1 SV=1

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           FREFLR E+SEEN+LFW+ACE+LK+E+N   IEEKAR IYEDYISILSPKEV+ D
Sbjct: 127 FREFLRTEFSEENMLFWMACEELKREANKSTIEEKARIIYEDYISILSPKEVSLD 181

Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins.

Mus musculus (taxid: 10090)

>sp|P49795|RGS19_HUMAN Regulator of G-protein signaling 19 OS=Homo sapiens GN=RGS19 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/56 (73%), Positives = 49/56 (87%)

Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +FR FLR EYSEEN+LFWLACE+LK E+N  V++EKAR IYEDY+SILSPKEV+ D
Sbjct: 103 VFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLD 158

Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G-alpha subfamily 1 members, with the order G(i)a3 > G(i)a1 > G(o)a >> G(z)a/G(i)a2. Activity on G(z)-alpha is inhibited by phosphorylation and palmitoylation of the G-protein.

Homo sapiens (taxid: 9606)

>sp|Q9CX84|RGS19_MOUSE Regulator of G-protein signaling 19 OS=Mus musculus GN=Rgs19 PE=2 SV=1

 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/56 (73%), Positives = 49/56 (87%)

Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +FR FLR EYSEEN+LFWLACE+LK E+N  V++EKAR IYEDY+SILSPKEV+ D
Sbjct: 103 VFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLD 158

Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G-alpha subfamily 1 members, with the order G(i)a3 > G(i)a1 > G(o)a >> G(z)a/G(i)a2. Activity on G(z)-alpha is inhibited by phosphorylation and palmitoylation of the G-protein.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
158286230	237	AGAP007127-PA [Anopheles gambiae str. PE	0.456	0.240	0.877	7e-22
193631927	270	PREDICTED: regulator of G-protein signal	0.456	0.211	0.877	9e-22
189233787	284	PREDICTED: similar to AGAP007127-PA [Tri	0.456	0.200	0.842	1e-21
170036846	159	conserved hypothetical protein [Culex qu	0.456	0.358	0.877	2e-21
427792251	437	Putative termination of g-protein couple	0.456	0.130	0.859	4e-21
157115335	180	regulator of g protein signaling [Aedes	0.712	0.494	0.604	6e-21
270015072	167	hypothetical protein TcasGA2_TC014234 [T	0.456	0.341	0.842	7e-21
307209078	317	Regulator of G-protein signaling 20 [Har	0.456	0.179	0.824	2e-20
410960258	210	PREDICTED: LOW QUALITY PROTEIN: regulato	0.68	0.404	0.593	4e-20
351708515	210	Regulator of G-protein signaling 17 [Het	0.68	0.404	0.593	4e-20

>gi|158286230|ref|XP_308634.3| AGAP007127-PA [Anopheles gambiae str. PEST] gi|157020369|gb|EAA04115.3| AGAP007127-PA [Anopheles gambiae str. PEST]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 50/57 (87%), Positives = 54/57 (94%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           K FREFLRCEYSEENILFWLACE+LKKE+NP+ IEEKARFIYEDYISILSPKEV+ D
Sbjct: 115 KAFREFLRCEYSEENILFWLACEELKKETNPEAIEEKARFIYEDYISILSPKEVSLD 171

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193631927|ref|XP_001951409.1| PREDICTED: regulator of G-protein signaling 17-like [Acyrthosiphon pisum]

 Score =  107 bits (267), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 50/57 (87%), Positives = 55/57 (96%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           K+FR+FLRCEYSEENILFW+A E+LKKESNPDVIEEKARFIYEDYISILSPKEV+ D
Sbjct: 140 KIFRDFLRCEYSEENILFWMAVEELKKESNPDVIEEKARFIYEDYISILSPKEVSLD 196

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189233787|ref|XP_972835.2| PREDICTED: similar to AGAP007127-PA [Tribolium castaneum]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 54/57 (94%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           K+FR+FLRCEYSEENILFWLACEDLKKE+NP+ +EEKAR IYEDYISILSPKEV+ D
Sbjct: 145 KVFRDFLRCEYSEENILFWLACEDLKKENNPEAVEEKARIIYEDYISILSPKEVSLD 201

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170036846|ref|XP_001846272.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167879807|gb|EDS43190.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/57 (87%), Positives = 54/57 (94%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           K FREFLRCEYSEENILFWLACE+LKKE+NP+ IEEKARFIYEDYISILSPKEV+ D
Sbjct: 37  KAFREFLRCEYSEENILFWLACEELKKETNPEAIEEKARFIYEDYISILSPKEVSLD 93

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427792251|gb|JAA61577.1| Putative termination of g-protein coupled receptor signaling pathway, partial [Rhipicephalus pulchellus]

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/57 (85%), Positives = 55/57 (96%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           K+FR+FL+CEYSEENILFWLACEDLKKESNP++IEEKAR IYEDYISILSPKEV+ D
Sbjct: 321 KVFRDFLKCEYSEENILFWLACEDLKKESNPELIEEKARAIYEDYISILSPKEVSLD 377

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157115335|ref|XP_001658206.1| regulator of g protein signaling [Aedes aegypti] gi|108883529|gb|EAT47754.1| AAEL001193-PA [Aedes aegypti]

 Score =  104 bits (260), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 66/96 (68%), Gaps = 7/96 (7%)

Query: 35  KKDYPEEWKILLEKWDPKGEYTRKFQEKFG------DTYKLFREFLRCEYSEENILFWLA 88
           KKD P     L +   P  E  R + + F          K FR+FLRCEYSEENILFWLA
Sbjct: 49  KKD-PASSDTLFDGEQPSLEEIRSWGKSFDKLMRSPSGRKAFRDFLRCEYSEENILFWLA 107

Query: 89  CEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           CE+LKKE+NP+ IEEKARFIYEDYISILSPKEV+ D
Sbjct: 108 CEELKKETNPEAIEEKARFIYEDYISILSPKEVSLD 143

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270015072|gb|EFA11520.1| hypothetical protein TcasGA2_TC014234 [Tribolium castaneum]

 Score =  104 bits (259), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 54/57 (94%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           K+FR+FLRCEYSEENILFWLACEDLKKE+NP+ +EEKAR IYEDYISILSPKEV+ D
Sbjct: 28  KVFRDFLRCEYSEENILFWLACEDLKKENNPEAVEEKARIIYEDYISILSPKEVSLD 84

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307209078|gb|EFN86245.1| Regulator of G-protein signaling 20 [Harpegnathos saltator]

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 51/57 (89%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           KLFREFL  EYSEENI FWLACE LK+ESNP+ IEEKAR+IYEDYISILSPKEV+ D
Sbjct: 186 KLFREFLVSEYSEENIAFWLACEQLKRESNPETIEEKARYIYEDYISILSPKEVSLD 242

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|410960258|ref|XP_003986710.1| PREDICTED: LOW QUALITY PROTEIN: regulator of G-protein signaling 17 [Felis catus]

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 6/91 (6%)

Query: 40  EEWKILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLK 93
           E  ++L E  +P  +    + + F    K      LFREFLR EYSEEN+LFWLACEDLK
Sbjct: 62  ESIQVLEESQNPTSDEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLK 121

Query: 94  KESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           KE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct: 122 KEQNKKVIEEKARMIYEDYISILSPKEVSLD 152

Source: Felis catus

Species: Felis catus

Genus: Felis

Family: Felidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|351708515|gb|EHB11434.1| Regulator of G-protein signaling 17 [Heterocephalus glaber]

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/91 (59%), Positives = 61/91 (67%), Gaps = 6/91 (6%)

Query: 40  EEWKILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLK 93
           E  ++L E   P  +    + + F    K      LFREFLR EYSEEN+LFWLACEDLK
Sbjct: 62  ESIQVLEESQSPTADEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLK 121

Query: 94  KESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           KE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct: 122 KEQNKKVIEEKARMIYEDYISILSPKEVSLD 152

Source: Heterocephalus glaber

Species: Heterocephalus glaber

Genus: Heterocephalus

Family: Bathyergidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
UNIPROTKB|Q9UGC6	210	RGS17 "Regulator of G-protein	0.68	0.404	0.604	1.1e-21
UNIPROTKB|E2QTJ9	232	RGS17 "Uncharacterized protein	0.872	0.469	0.495	1.9e-21
UNIPROTKB|F6V7Y8	210	RGS17 "Uncharacterized protein	0.68	0.404	0.593	2.4e-21
UNIPROTKB|F1S7X6	206	RGS17 "Uncharacterized protein	0.68	0.412	0.593	3.9e-21
ZFIN|ZDB-GENE-040718-229	208	rgs17 "regulator of G-protein	0.448	0.269	0.785	3.9e-21
UNIPROTKB|Q9PWA0	210	RGS17 "Regulator of G-protein	0.448	0.266	0.857	4.9e-21
UNIPROTKB|A7MBG6	210	RGS17 "RGS17 protein" [Bos tau	0.68	0.404	0.582	8e-21
MGI|MGI:1927469	210	Rgs17 "regulator of G-protein	0.68	0.404	0.571	8e-21
RGD|1305515	215	Rgs17 "regulator of G-protein	0.68	0.395	0.571	8e-21
MGI|MGI:1915153	216	Rgs19 "regulator of G-protein	0.448	0.259	0.732	1.4e-20

UNIPROTKB|Q9UGC6 RGS17 "Regulator of G-protein signaling 17" [Homo sapiens (taxid:9606)]

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 55/91 (60%), Positives = 62/91 (68%)

Query:    40 EEWKILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLK 93
             E  ++L E  +P  E    + + F    K      LFREFLR EYSEEN+LFWLACEDLK
Sbjct:    62 ESIQVLEECQNPTAEEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLK 121

Query:    94 KESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             KE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct:   122 KEQNKKVIEEKARMIYEDYISILSPKEVSLD 152

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0005886 "plasma membrane" evidence=IBA

GO:0043547 "positive regulation of GTPase activity" evidence=IBA

UNIPROTKB|E2QTJ9 RGS17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 57/115 (49%), Positives = 68/115 (59%)

Query:    16 CEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEKFGDTYK------L 69
             C+  T    ++     R       E  ++L E  +P  +    + + F    K      L
Sbjct:    60 CKSLTVRNEERGENAGRPTHTTKMESIQVLEECQNPTSDEVLSWSQNFDKMMKAPAGRNL 119

Query:    70 FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             FREFLR EYSEEN+LFWLACEDLKKE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct:   120 FREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILSPKEVSLD 174

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

UNIPROTKB|F6V7Y8 RGS17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 54/91 (59%), Positives = 62/91 (68%)

Query:    40 EEWKILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLK 93
             E  ++L E  +P  +    + + F    K      LFREFLR EYSEEN+LFWLACEDLK
Sbjct:    62 ESIQVLEECQNPTSDEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLK 121

Query:    94 KESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             KE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct:   122 KEQNKKVIEEKARMIYEDYISILSPKEVSLD 152

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

UNIPROTKB|F1S7X6 RGS17 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 54/91 (59%), Positives = 62/91 (68%)

Query:    40 EEWKILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLK 93
             E  ++L E  +P  +    + + F    K      LFREFLR EYSEEN+LFWLACEDLK
Sbjct:    58 ESIQVLEECQNPTPDEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLK 117

Query:    94 KESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             KE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct:   118 KEQNKKVIEEKARMIYEDYISILSPKEVSLD 148

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

ZFIN|ZDB-GENE-040718-229 rgs17 "regulator of G-protein signaling 17" [Danio rerio (taxid:7955)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 44/56 (78%), Positives = 52/56 (92%)

Query:    69 LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             +FREFLR EYSEEN+LFW+ACED+KKE+NP V+EEKAR IYEDY+SILSPKEV+ D
Sbjct:    96 VFREFLRSEYSEENLLFWIACEDMKKETNPSVVEEKARIIYEDYVSILSPKEVSLD 151

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IBA

GO:0043547 "positive regulation of GTPase activity" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0005886 "plasma membrane" evidence=IBA

UNIPROTKB|Q9PWA0 RGS17 "Regulator of G-protein signaling 17" [Gallus gallus (taxid:9031)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 48/56 (85%), Positives = 50/56 (89%)

Query:    69 LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             LFREFLR EYSEEN+LFWLACEDLKKE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct:    97 LFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARLIYEDYISILSPKEVSLD 152

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0005886 "plasma membrane" evidence=IBA

GO:0005634 "nucleus" evidence=IEA

GO:0043547 "positive regulation of GTPase activity" evidence=IBA

UNIPROTKB|A7MBG6 RGS17 "RGS17 protein" [Bos taurus (taxid:9913)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 53/91 (58%), Positives = 61/91 (67%)

Query:    40 EEWKILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLK 93
             E  ++L E  +P       + + F    K      LFREFLR EYSEEN+LFWLACEDLK
Sbjct:    62 ESIQVLEECQNPTSNEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLK 121

Query:    94 KESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             KE N  VIEEKAR IY+DYISILSPKEV+ D
Sbjct:   122 KEQNKKVIEEKARMIYDDYISILSPKEVSLD 152

GO:0043547 "positive regulation of GTPase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005096 "GTPase activator activity" evidence=ISS

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

MGI|MGI:1927469 Rgs17 "regulator of G-protein signaling 17" [Mus musculus (taxid:10090)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 52/91 (57%), Positives = 61/91 (67%)

Query:    40 EEWKILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLK 93
             E  ++L E  +P  +    + + F    K      LFREFLR EYSEEN+LFWLACEDLK
Sbjct:    62 ESIQVLEECQNPTADEVLSWSQNFDKMMKTPAGRNLFREFLRTEYSEENLLFWLACEDLK 121

Query:    94 KESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             KE N   +EEKAR IYEDYISILSPKEV+ D
Sbjct:   122 KEQNKKAVEEKARMIYEDYISILSPKEVSLD 152

GO:0005096 "GTPase activator activity" evidence=IBA;TAS

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IBA

GO:0005886 "plasma membrane" evidence=IBA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=TAS

GO:0009968 "negative regulation of signal transduction" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

RGD|1305515 Rgs17 "regulator of G-protein signaling 17" [Rattus norvegicus (taxid:10116)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 52/91 (57%), Positives = 61/91 (67%)

Query:    40 EEWKILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLK 93
             E  ++L E  +P  +    + + F    K      LFREFLR EYSEEN+LFWLACEDLK
Sbjct:    67 ESIQVLEECQNPTADEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLK 126

Query:    94 KESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             KE N   +EEKAR IYEDYISILSPKEV+ D
Sbjct:   127 KEQNKKAVEEKARMIYEDYISILSPKEVSLD 157

GO:0005096 "GTPase activator activity" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0005886 "plasma membrane" evidence=IBA

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

GO:0043547 "positive regulation of GTPase activity" evidence=IBA

MGI|MGI:1915153 Rgs19 "regulator of G-protein signaling 19" [Mus musculus (taxid:10090)]

 Score = 223 (83.6 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
 Identities = 41/56 (73%), Positives = 49/56 (87%)

Query:    69 LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             +FR FLR EYSEEN+LFWLACE+LK E+N  V++EKAR IYEDY+SILSPKEV+ D
Sbjct:   103 VFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLD 158

GO:0001965 "G-protein alpha-subunit binding" evidence=ISO

GO:0005096 "GTPase activator activity" evidence=IBA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IBA

GO:0005886 "plasma membrane" evidence=IBA

GO:0005903 "brush border" evidence=ISO

GO:0009968 "negative regulation of signal transduction" evidence=IEA

GO:0016020 "membrane" evidence=ISO

GO:0030136 "clathrin-coated vesicle" evidence=ISO

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

GO:0044445 "cytosolic part" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9PWA0	RGS17_CHICK	No assigned EC number	0.8421	0.456	0.2714	yes	N/A
Q9QZB0	RGS17_MOUSE	No assigned EC number	0.5714	0.68	0.4047	yes	N/A
Q9UGC6	RGS17_HUMAN	No assigned EC number	0.6043	0.68	0.4047	yes	N/A
P49808	RGS2_CAEEL	No assigned EC number	0.7192	0.456	0.3372	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	125
cd08718	118	cd08718, RGS_RZ-like, Regulator of G protein signa	3e-32
cd08746	167	cd08746, RGS_RGS20, Regulator of G protein signali	3e-26
cd08744	118	cd08744, RGS_RGS17, Regulator of G protein signali	3e-25
cd08745	118	cd08745, RGS_RGS19, Regulator of G protein signali	3e-25
cd08714	114	cd08714, RGS_RGS4, Regulator of G protein signalin	1e-16
cd08713	114	cd08713, RGS_RGS3, Regulator of G protein signalin	1e-15
pfam03392	95	pfam03392, OS-D, Insect pheromone-binding family,	1e-15
pfam00615	117	pfam00615, RGS, Regulator of G protein signaling d	1e-15
cd08717	114	cd08717, RGS_RGS5, Regulator of G protein signalin	3e-15
smart00315	118	smart00315, RGS, Regulator of G protein signalling	4e-14
cd08706	113	cd08706, RGS_R12-like, Regulator of G protein sign	2e-13
cd08712	114	cd08712, RGS_RGS18, Regulator of G protein signali	2e-13
cd08709	114	cd08709, RGS_RGS2, Regulator of G protein signalin	2e-13
cd08723	111	cd08723, RGS_RGS21, Regulator of G protein signali	5e-13
cd07440	113	cd07440, RGS, Regulator of G protein signaling (RG	6e-12
cd08711	125	cd08711, RGS_RGS8, Regulator of G protein signalin	1e-11
cd08705	121	cd08705, RGS_R7-like, Regulator of G protein signa	8e-11
cd08741	113	cd08741, RGS_RGS10, Regulator of G protein signali	9e-11
cd08710	114	cd08710, RGS_RGS16, Regulator of G protein signali	9e-11
cd08715	114	cd08715, RGS_RGS1, Regulator of G protein signalin	1e-10
cd08743	129	cd08743, RGS_RGS14, Regulator of G protein signali	1e-08
cd08734	109	cd08734, RGS-like_1, Uncharacterized Regulator of	3e-07
cd08716	114	cd08716, RGS_RGS13, Regulator of G protein signali	1e-06
cd08739	121	cd08739, RGS_RGS9, Regulator of G protein signalin	2e-06
cd08742	115	cd08742, RGS_RGS12, Regulator of G protein signali	5e-06
cd08737	125	cd08737, RGS_RGS6, Regulator of G protein signalin	7e-05
cd08738	121	cd08738, RGS_RGS7, Regulator of G protein signalin	5e-04
cd08707	117	cd08707, RGS_Axin, Regulator of G protein signalin	6e-04
cd08728	179	cd08728, RGS-like_2, Uncharacterized Regulator of	0.001

>gnl|CDD|188673 cd08718, RGS_RZ-like, Regulator of G protein signaling (RGS) domain found in the RZ protein

 Score =  109 bits (275), Expect = 3e-32
 Identities = 46/57 (80%), Positives = 51/57 (89%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
            +FREFLR EYSEEN+LFWLACE+LKKE+N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct: 16  NVFREFLRTEYSEENMLFWLACEELKKEANKHVIEEKARLIYEDYISILSPKEVSLD 72

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RZ subfamily of the RGS protein family. They are a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. Deactivation of G-protein signaling is controlled by RGS domains, which accelerate GTPase activity of the alpha subunit by hydrolysis of GTP to GDP, which results in reassociation of the alpha-subunit with the beta-gamma-dimer and inhibition of downstream activity. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. The RZ subfamily of RGS proteins includes RGS17, RGS19 (former GAIP), RGS20, and its splice variant Ret-RGS. Length = 118

>gnl|CDD|188700 cd08746, RGS_RGS20, Regulator of G protein signaling (RGS) domain found in the RGS20 protein

 Score = 95.8 bits (238), Expect = 3e-26
 Identities = 44/55 (80%), Positives = 50/55 (90%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           FREFLR E+SEEN+LFW+ACE+LKKE+N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct: 67  FREFLRTEFSEENMLFWMACEELKKEANKSVIEEKARIIYEDYISILSPKEVSLD 121

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS20 protein (also known as RGSZ1), a member of the RZ subfamily of the RGS protein family. They are a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. Deactivation of G-protein signaling is controlled by the RGS domain, which accelerates GTPase activity of the alpha subunit by hydrolysis of GTP to GDP resulting in reassociation of the alpha-subunit with the beta-gamma-dimer and inhibition of downstream activity. As a major G-protein regulator, the RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. The RZ subfamily of RGS proteins include RGS17, RGS19 (former GAIP), and the splice variant of RGS20, Ret-RGS. RGS20 is expressed exclusively in brain, with the highest concentrations in the temporal lobe and the caudate nucleus and may play a role in signaling regulation in these brain regions. RGS20 acts as a GAP of both G-alpha-z and G-alpha-I and controls signaling in the mu opioid receptor pathway. Length = 167

>gnl|CDD|188698 cd08744, RGS_RGS17, Regulator of G protein signaling (RGS) domain found in the RGS17 protein

 Score = 92.1 bits (228), Expect = 3e-25
 Identities = 48/56 (85%), Positives = 50/56 (89%)

Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           LFREFLR EYSEEN+LFWLACEDLKKE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct: 17  LFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARLIYEDYISILSPKEVSLD 72

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS17 protein, a member of the RZ subfamily of the RGS protein family. They are a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, the RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. Deactivation of the G-protein signaling controlled by the RGS domain, which accelerates GTPase activity of the alpha subunit by hydrolysis of GTP to GDP, results in reassociation of the alpha-subunit with the beta-gamma-dimer and inhibition of downstream activity. The RZ subfamily of RGS proteins includes RGS19 (former GAIP), RGS20, and its splice variant Ret-RGS. RGS17 is a relatively non-selective GAP for G-alpha-z and other G-alpha-i/o proteins. RGS17 blocks dopamine receptor-mediated inhibition of cAMP accumulation; it also blocks thyrotropin releasing hormone-stimulated Ca++ mobilization. RGS17, like other members of RZ subfamily, can act either as a GAP or as G-protein effector antogonist. Length = 118

>gnl|CDD|188699 cd08745, RGS_RGS19, Regulator of G protein signaling (RGS) domain found in the RGS19 protein

 Score = 91.7 bits (227), Expect = 3e-25
 Identities = 44/56 (78%), Positives = 50/56 (89%)

Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +FREFLR EYSEEN+LFWLACE+LK E+N  VI+EKAR IYEDYISILSPKEV+ D
Sbjct: 17  VFREFLRTEYSEENMLFWLACEELKAEANKHVIDEKARLIYEDYISILSPKEVSLD 72

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS19 protein (also known as GAIP), a member of the RZ subfamily of the RGS protein family. They are a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. Deactivation of G-protein signaling is controlled by RGS domains, which accelerate GTPase activity of the alpha subunit by hydrolysis of GTP to GDP, resulting in a reassociation of the alpha-subunit with the beta-gamma-dimer and an inhibition of downstream activity. As a major G-protein regulator, the RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. The RZ subfamily of RGS proteins includes RGS17, RGS20, and its splice variant Ret-RGS. RGS19 participates in regulation of dopamine receptor D2R and D3R, as well as beta-adrenergic receptors . Length = 118

>gnl|CDD|188669 cd08714, RGS_RGS4, Regulator of G protein signaling (RGS) domain found in the RGS4 protein

 Score = 69.9 bits (171), Expect = 1e-16
 Identities = 30/57 (52%), Positives = 40/57 (70%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
             F+ FL+ EYSEENI FW++CED KK  +P  +  KAR IYE++IS+ + KEV  D
Sbjct: 12  AAFKAFLKSEYSEENIDFWVSCEDYKKTKSPSKLSPKARKIYEEFISVQATKEVNLD 68

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS4 protein. RGS4 is a member of the R4/RGS subfamily of the RGS family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha subunits. The RGS domain controls G-protein signaling by accelerating the GTPase activity of the G-alpha subunit which leads to G protein deactivation and promotes desensitization. RGS4 is expressed widely in brain including prefrontal cortex, striatum, locus coeruleus (LC), and hippocampus and has been implicated in regulation of opioid, cholinergic, and serotonergic signaling. Dysfunctions in RGS4 proteins are involved in etiology of Parkinson's disease, addiction, and schizophrenia. RGS4 also is up-regulated in the failing human heart. RGS4 interacts with many binding partners outside of GPCR pathways, including calmodulin, COP, Kir3, PIP, calcium/CaM, PA, ErbB3, and 14-3-3. Length = 114

>gnl|CDD|188668 cd08713, RGS_RGS3, Regulator of G protein signaling (RGS) domain found in the RGS3 protein

 Score = 67.2 bits (164), Expect = 1e-15
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +FR FL+ E+SEEN+ FWLACE+ KK  +   +  +A+ I+ +YI+I S KEV  D
Sbjct: 13  VFRAFLQTEFSEENLEFWLACEEYKKIKSQSKMASRAKKIFAEYIAIQSCKEVNLD 68

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS3 protein. RGS3 is a member of the R4/RGS subfamily of the RGS family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha subunits. The RGS domain controls G-protein signaling by accelerating the GTPase activity of the G-alpha subunit which leads to G protein deactivation and promotes desensitization. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes. RGS3 induces apoptosis when overexpressed and is involved in cell migration through interaction with the Ephrin receptor. RGS3 exits as several splice isoforms and interacts with neuroligin, estrogen receptor-alpha, and 14-3-3 outside of the GPCR pathways. Length = 114

>gnl|CDD|146171 pfam03392, OS-D, Insect pheromone-binding family, A10/OS-D

 Score = 66.4 bits (163), Expect = 1e-15
 Identities = 26/57 (45%), Positives = 39/57 (68%)

Query: 3  ECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKF 59
          E ++ +P  L+T C KCT  Q + A  VI+ L ++ PEEWK L+ K+DP+GEY +K+
Sbjct: 39 ELKKVLPDALETDCAKCTEKQKEGARKVIKFLIENKPEEWKELVAKYDPEGEYRKKY 95

Length = 95

>gnl|CDD|216023 pfam00615, RGS, Regulator of G protein signaling domain

 Score = 67.3 bits (165), Expect = 1e-15
 Identities = 27/54 (50%), Positives = 38/54 (70%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEV 121
           +LFREFL  E+SEEN+ FWLACE+ KK  + +   +KAR IY  +++  SP E+
Sbjct: 13  RLFREFLESEFSEENLEFWLACEEFKKAKSDEERLKKAREIYNKFLAPDSPSEI 66

RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits. Length = 117

>gnl|CDD|188672 cd08717, RGS_RGS5, Regulator of G protein signaling (RGS) domain found in the RGS5 protein

 Score = 66.2 bits (161), Expect = 3e-15
 Identities = 29/55 (52%), Positives = 38/55 (69%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F+ FL+ E+SEENI FW ACED KK  +P  +  KA+ IYE++I   +PKEV  D
Sbjct: 14  FKSFLKSEFSEENIEFWEACEDYKKTKSPLKMATKAKKIYEEFIQTEAPKEVNID 68

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS5 protein. RGS5 is member of the R4/RGS subfamily of the RGS family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha subunits. The RGS domain controls G-protein signaling by accelerating the GTPase activity of the G-alpha subunit which leads to G protein deactivation and promotes desensitization. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. Two splice isoforms of RGS5 has been found: RGS5L (long) which is expressed in smooth muscle cells (pericytes) and heart and RGS5S (short) which is highly expressed in the ciliary body of the eye, kidney, brain, spleen, skeletal muscle, and small intestine. Outside of the GPCR pathway, RGS5 interacts with the 14-3-3 protein. Length = 114

>gnl|CDD|214613 smart00315, RGS, Regulator of G protein signalling domain

 Score = 63.1 bits (154), Expect = 4e-14
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEV 121
               LFREFL  E+SEEN+ FWLA E+ KK  + +    KAR IY+ ++S  +PKEV
Sbjct: 10  IGRLLFREFLESEFSEENLEFWLAVEEFKKAEDDEERIAKAREIYDKFLSPNAPKEV 66

RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits. Length = 118

>gnl|CDD|188661 cd08706, RGS_R12-like, Regulator of G protein signaling (RGS) domain found in the R12 subfamily of proteins

 Score = 61.6 bits (150), Expect = 2e-13
 Identities = 25/55 (45%), Positives = 35/55 (63%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F EFL+ E+SEENILFW ACE  KK  +   + ++AR IY+ ++S  +   V  D
Sbjct: 14  FTEFLKKEFSEENILFWQACEKFKKIPDKKQLVQEAREIYDTFLSSKASSPVNID 68

The RGS (Regulator of G-protein Signaling) domain is an essential part of the R12 (Neuronal RGS) protein subfamily of the RGS protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play a critical regulatory role as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. Deactivation of G-protein signaling, controlled by RGS domain, accelerates GTPase activity of the alpha subunit by hydrolysis of GTP to GDP that results in reassociation of the alpha-subunit with the beta-gamma-dimer and thereby inhibition of downstream activity. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. The R12 RGS subfamily includes RGS10, RGS12 and RGS14 all of which are highly selective for G-alpha-i1 over G-alpha-q. Length = 113

>gnl|CDD|188667 cd08712, RGS_RGS18, Regulator of G protein signaling (RGS) domain found in the RGS18 protein

 Score = 61.5 bits (149), Expect = 2e-13
 Identities = 31/60 (51%), Positives = 38/60 (63%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           D  + F  FL+ E+SEENI FW+ACED KK   P  I  KA+ IYE +I   +PKEV  D
Sbjct: 9   DGLEAFTRFLKTEFSEENIEFWIACEDYKKSKTPQQIHLKAKAIYEKFIQTDAPKEVNLD 68

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS18 protein. RGS18 is a member of the RGS protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha subunits. The RGS domain controls G-protein signaling by accelerating the GTPase activity of the G-alpha subunit which leads to G protein deactivation and promotes desensitization. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS18 is a member of the R4/RGS subfamily and is expressed predominantly in osteoclasts where it acts as a negative regulator of the acidosis-induced osteoclastogenic OGR1/NFAT signaling pathway. RANKL (receptor activator of nuclear factor B ligand) stimulates osteoclastogenesis by inhibiting expression of RGS18. Length = 114

>gnl|CDD|188664 cd08709, RGS_RGS2, Regulator of G protein signaling (RGS) domain found in the RGS2 protein

 Score = 61.2 bits (148), Expect = 2e-13
 Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 59  FQEKFGDTYKL--FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISIL 116
           F E     Y +  FR FL+ E+SEENI FWLACED KK  +P  +  KA+ IY D+I   
Sbjct: 1   FDELLASKYGVAAFRAFLKSEFSEENIEFWLACEDFKKTKSPQKLTSKAKKIYTDFIEKE 60

Query: 117 SPKEVTQD 124
           +PKE+  D
Sbjct: 61  APKEINID 68

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS2 protein. RGS2 is a member of R4/RGS subfamily of RGS family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. The RGS domain controls G-protein signaling by accelerating the GTPase activity of the G- alpha subunit which leads to G protein deactivation and promotes desensitization. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS2 plays important roles in the regulation of blood pressure and the pathogenesis of human hypertension, as well as in bone formation in osteoblasts. Outside of the GPCR pathway RGS2 interacts with calmodulin, beta- COP, tubulin, PKG1-alpha, and TRPV6. Length = 114

>gnl|CDD|188678 cd08723, RGS_RGS21, Regulator of G protein signaling (RGS) domain found in the RGS21 protein

 Score = 60.1 bits (145), Expect = 5e-13
 Identities = 28/55 (50%), Positives = 37/55 (67%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           FR FL+ E+SEEN+ FWLACED KK  +   I  KA+ IY ++I   +PKE+  D
Sbjct: 11  FRTFLKSEFSEENVEFWLACEDFKKTKSSTEIALKAQMIYSEFIQADAPKEINID 65

The RGS (Regulator of G-protein Signaling) domain is an essential part RGS21 protein, a member of RGS protein family. They are a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, apoptosis, and cell proliferation, as well as modulation of cardiac development. RGS21 is a member of the R4/RGS subfamily and its mRNA was detected only in sensory taste cells that express sweet taste receptors and the taste G-alpha subunit, gustducin, suggesting a potential role in regulating taste transduction. Length = 111

>gnl|CDD|188659 cd07440, RGS, Regulator of G protein signaling (RGS) domain superfamily

 Score = 57.4 bits (139), Expect = 6e-12
 Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)

Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPD-VIEEKARFIYEDYISILSPKEV 121
            FR+FL+ E+ EEN+ FWLA E  KK ++ D  ++ KA+ IY+ YIS  +PKE+
Sbjct: 9   YFRQFLKSEHCEENLEFWLAVEKFKKTTSSDEELKSKAKEIYDKYISKDAPKEI 62

The RGS domain is an essential part of the Regulator of G-protein Signaling (RGS) protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. While inactive, G-alpha-subunits bind GDP, which is released and replaced by GTP upon agonist activation. GTP binding leads to dissociation of the alpha-subunit and the beta-gamma-dimer, allowing them to interact with effectors molecules and propagate signaling cascades associated with cellular growth, survival, migration, and invasion. Deactivation of the G-protein signaling controlled by the RGS domain accelerates GTPase activity of the alpha subunit by hydrolysis of GTP to GDP, which results in the reassociation of the alpha-subunit with the beta-gamma-dimer and thereby inhibition of downstream activity. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS proteins are also involved in apoptosis and cell proliferation, as well as modulation of cardiac development. Several RGS proteins can fine-tune immune responses, while others play important roles in neuronal signals modulation. Some RGS proteins are principal elements needed for proper vision. Length = 113

>gnl|CDD|188666 cd08711, RGS_RGS8, Regulator of G protein signaling (RGS) domain found in the RGS8 protein

 Score = 57.1 bits (137), Expect = 1e-11
 Identities = 25/55 (45%), Positives = 38/55 (69%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           FR FL+ E+SEEN+ FWLACE+ KK  +   +  KA  I+E+++ + +P+EV  D
Sbjct: 25  FRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNID 79

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS8 protein. RGS8 is a member of R4/RGS subfamily of RGS family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha subunits. The RGS domain controls G-protein signaling by accelerating the GTPase activity of the G-alpha subunit which leads to G protein deactivation and promotes desensitization. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS8 is involved in G-protein-gated potassium channels regulation and predominantly expressed in the brain. RGS8 also is selectively expressed in the hematopoietic system (NK cells). Length = 125

>gnl|CDD|188660 cd08705, RGS_R7-like, Regulator of G protein signaling (RGS) domain found in the R7 subfamily of proteins

 Score = 54.6 bits (132), Expect = 8e-11
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F +FL  E+S EN+ FW AC+DLK      V  EK + IY+++++  +P  +  D
Sbjct: 22  FLKFLEKEFSGENLRFWEACQDLKYGPQSQV-PEKVQEIYQEFLAPGAPSWINID 75

The RGS (Regulator of G-protein Signaling) domain is an essential part of the R7 (Neuronal RGS) protein subfamily of the RGS protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. The R7 subfamily includes RGS6, RGS7, RGS9, and RGS11, all of which, in humans, are expressed predominantly in the nervous system, form an obligatory complex with G-beta-5, and play important roles in the regulation of crucial neuronal processes. In addition, R7 proteins were found to bind many other proteins outside of the G protein signaling pathways including: m-opioid receptor, beta-arrestin, alpha-actinin-2, NMDAR, polycystin, spinophilin, guanylyl cyclase, among others. Length = 121

>gnl|CDD|188695 cd08741, RGS_RGS10, Regulator of G protein signaling (RGS) domain found in the RGS10 protein

 Score = 54.7 bits (131), Expect = 9e-11
 Identities = 28/54 (51%), Positives = 39/54 (72%)

Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEV 121
           K FREFL+ E+SEEN+LFWLACED KK  +   ++EKA+ IY  ++S  +  +V
Sbjct: 12  KRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQV 65

RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS10 protein. RGS10 is a member of the RA/RGS subfamily of RGS proteins family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS10 belong to the R12 RGS subfamily, which includes RGS12 and RGS14, all of which are highly selective for G-alpha-i1 over G-alpha-q. RGS10 exists in 2 splice isoforms. RGS10A is specifically expressed in osteoclasts and is a key component in the RANKL signaling mechanism for osteoclast differentiation, whereas RGS10B expressed in brain and in immune tissues and has been implicated in diverse processes including: promoting of dopaminergic neuron survival via regulation of the microglial inflammatory response, modulation of presynaptic and postsynaptic G-protein signalling, as well as a possible role in regulation of gene expression. Length = 113

>gnl|CDD|188665 cd08710, RGS_RGS16, Regulator of G protein signaling (RGS) domain found in the RGS16 protein

 Score = 54.7 bits (131), Expect = 9e-11
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F  FL+ E+SEEN+ FWLACE+ KK  +   +  +A  I+E++I   +PKEV  D
Sbjct: 14  FHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFEEFIRSEAPKEVNID 68

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS16 protein. RGS16 is a member of the RGS protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha subunits. The RGS domain controls G-protein signaling by accelerating the GTPase activity of the G-alpha subunit which leads to G protein deactivation and promotes desensitization. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS16 is a member of the R4/RGS subfamily and interacts with neuronal G-alpha0. RGS16 expression is upregulated by IL-17 of the NF-kappaB signaling pathway in autoimmune B cells. Length = 114

>gnl|CDD|188670 cd08715, RGS_RGS1, Regulator of G protein signaling (RGS) domain found in the RGS1 protein

 Score = 54.2 bits (130), Expect = 1e-10
 Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +FR FL+ E+SEENI FWLACED KK +  D++  KA  IY++++   + K++  D
Sbjct: 13  VFRSFLKSEFSEENIEFWLACEDYKK-TESDLLPCKAEEIYKEFVQSDAAKQINID 67

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS1 protein. RGS1 is a member of the R4/RGS subfamily of the RGS family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha subunits. The RGS domain controls G-protein signaling by accelerating the GTPase activity of the G-alpha subunit which leads to G protein deactivation and promotes desensitization. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS 1 is expressed predominantly in hematopoietic compartments, including T and B lymphocytes, and may play a major role in chemokine-mediated homing of lymphocytes to secondary lymphoid organs. In addition, RGS1 interacts with calmodulin and 14-3-3 protein outside of the GPCR pathway. Length = 114

>gnl|CDD|188697 cd08743, RGS_RGS14, Regulator of G protein signaling (RGS) domain found in the RGS14 protein

 Score = 49.3 bits (117), Expect = 1e-08
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 55  YTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDV--IEEKARFIYEDY 112
           + R  Q+  G  Y  F EFL+ E+S EN+ FW ACE  ++    D   + ++AR IY ++
Sbjct: 11  FERLLQDPLGVEY--FTEFLKKEFSAENVNFWKACERFQQIPASDTQQLAQEARKIYNEF 68

Query: 113 ISILSPKEVTQD 124
           +S  S   V  D
Sbjct: 69  LSSSSQSPVNID 80

RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS14 protein. RGS14 is a member of the RA/RGS subfamily of RGS proteins family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS14 belong to the R12 RGS subfamily, which includes RGS10 and RGS12, all of which are highly selective for G-alpha-i1 over G-alpha-q. RGS14 binds and regulates the subcellular localization and activities of H-Ras and Raf kinases in cells and thereby integrates G protein and Ras/Raf signaling pathways. Length = 129

>gnl|CDD|188688 cd08734, RGS-like_1, Uncharacterized Regulator of G protein Signaling (RGS) domain subfamily, child 1

 Score = 45.5 bits (108), Expect = 3e-07
 Identities = 18/58 (31%), Positives = 30/58 (51%)

Query: 64  GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEV 121
            +T  LF      ++S EN+ F    ++ K+ SNP      A  IY+++IS  SP ++
Sbjct: 2   PNTSPLFGFSAESDFSGENLSFLTLVKEYKRLSNPAEKFTLASKIYKEFISSESPFQI 59

These uncharacterized RGS-like domains consists largely of hypothetical proteins. The RGS domain is an essential part of the Regulator of G-protein Signaling (RGS) protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory role as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. As a major G-protein regulator, the RGS domain containing proteins that are involved in many crucial cellular processes. RGS proteins play critical regulatory role as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development. Several RGS proteins can fine-tune immune responses, while others play an important role in neuronal signal modulation. Some RGS proteins are the principal elements needed for proper vision. Length = 109

>gnl|CDD|188671 cd08716, RGS_RGS13, Regulator of G protein signaling (RGS) domain found in the RGS13 protein

 Score = 43.4 bits (102), Expect = 1e-06
 Identities = 21/56 (37%), Positives = 34/56 (60%)

Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           ++  +L+ E+S+ENI FWLACE  KK ++       AR ++  YI   +P+E+  D
Sbjct: 13  IYATYLKTEHSDENIEFWLACETYKKIASQRKRISMARKLFASYIQPQAPREINID 68

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS13 protein. RGS13 is member of the R4/RGS subfamily of the RGS family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha subunits. The RGS domain controls G-protein signaling by accelerating the GTPase activity of the G-alpha subunit which leads to G protein deactivation and promotes desensitization. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS13 is predominantly expressed in T and B lymphocytes and in mast cells, and plays a role in adaptive immune responses. RGS13 also found in Rgs13, which is also expressed in dendritic cells and in neuroendocrine cells of the thymus, gastrointestinal, and respiratory tracts. Outside of the GPCR pathway, RGS5 interacts with the PIP3 protein. Length = 114

>gnl|CDD|188693 cd08739, RGS_RGS9, Regulator of G protein signaling (RGS) domain found in the RGS9 protein

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F+ FL+ E+S EN+ FW ACEDLK   +   ++EKA  IY+ +++  + + +  D
Sbjct: 22  FQLFLKKEFSGENLGFWEACEDLKY-GDQSKVKEKAEEIYKLFLAPGARRWINID 75

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS9 protein, a member of R7 subfamily of the RGS protein family. RGS is a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. Other members of the R7 subfamily (Neuronal RGS) include: RGS6, RGS7, and RGS11, all of which are expressed predominantly in the nervous system, form an obligatory complex with G-beta-5, and play important roles in the regulation of crucial neuronal processes such as vision and motor control. Additionally they have been implicated in many neurological conditions such as anxiety, schizophrenia, and drug dependence. RGS9 forms constitutive complexes with G-beta-5 subunit and controls such fundamental functions as vision and behavior. RGS9 exists in two splice isoforms: RGS9-1 which regulates phototransduction in rods and cones and RGS9-2 which regulates dopamine and opioid signaling in the basal ganglia. In addition, RGS9 was found to bind many other proteins outside of G protein signaling pathways including: mu-opioid receptor, beta-arrestin, alpha-actinin-2, NMDAR, polycystin, spinophilin, and guanylyl cyclase, among others. Length = 121

>gnl|CDD|188696 cd08742, RGS_RGS12, Regulator of G protein signaling (RGS) domain found in the RGS12 protein

 Score = 42.0 bits (98), Expect = 5e-06
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)

Query: 55  YTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLKK--ESNPDVIEEKARFIYEDY 112
           + R  Q+  G  Y  F EFLR E+SEENILFW ACE        +   +  +AR I+  +
Sbjct: 1   FERLLQDPVGVRY--FSEFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKF 58

Query: 113 IS 114
           + 
Sbjct: 59  LC 60

RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS12 protein. RGS12 is a member of the RA/RGS subfamily of RGS proteins family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS12 belong to the R12 RGS subfamily, which includes RGS10 and RGS14, all of which are highly selective for G-alpha-i1 over G-alpha-q. RGS12 exist in multiple splice variants: RGS12s (short) contains the core RGS/RBD/GoLoco domains, while RGS12L (long) has additional N-terminal PDZ and PTB domains. RGS12 splice variants show distinct expression patterns, suggesting that they have discrete functions during mouse embryogenesis. RGS12 also may play a critical role in coordinating Ras-dependent signals that are required for promoting and maintaining neuronal differentiation. Length = 115

>gnl|CDD|188691 cd08737, RGS_RGS6, Regulator of G protein signaling (RGS) domain found in the RGS6 protein

 Score = 39.2 bits (91), Expect = 7e-05
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F  FL  E+S EN+ FWLA +DLKK+   DV  ++   I++++++  +P  +  D
Sbjct: 23  FLRFLESEFSSENLRFWLAVQDLKKQPLQDV-AKRVEEIWQEFLAPGAPSAINLD 76

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS6 protein, a member of R7 subfamily of the RGS protein family. RGS is a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). Other members of the R7 subfamily (Neuronal RGS) include: RGS7, RGS9, and RGS11, all of which are expressed predominantly in the nervous system, form an obligatory complex with G-beta-5, and play important roles in the regulation of crucial neuronal processes such as vision and motor control. Additionally they have been implicated in many neurological conditions such as anxiety, schizophrenia, and drug dependence. RGS6 exists in multiple splice isoforms with identical RGS domains, but possess complete or incomplete GGL domains and distinct N- and C-terminal domains. RGS6 interacts with SCG10, a neuronal growth-associated protein and therefore regulates neuronal differentiation. Another RGS6-binding protein is DMAP1, a component of the Dnmt1 complex involved in repression of newly replicated genes. Mutations of a critical residue required for interaction of RGS6 protein with G proteins did not affect the ability of RGS6 to interact with both SCG10 and DMAP1. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. Length = 125

>gnl|CDD|188692 cd08738, RGS_RGS7, Regulator of G protein signaling (RGS) domain found in the RGS7 protein

 Score = 37.0 bits (85), Expect = 5e-04
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F +FL  E+S EN+ FWLA EDLKK    +V   + + I++++++  +P  +  D
Sbjct: 22  FLKFLESEFSSENLRFWLAVEDLKKRPIREV-PSRVQEIWQEFLAPGAPSAINLD 75

The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS7 protein, a member of R7 subfamily of the RGS protein family. RGS is a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. Other members of the R7 subfamily (Neuronal RGS) include: RGS6, RGS9, and RGS11, all of which are expressed predominantly in the nervous system, form an obligatory complex with G-beta-5, and play important roles in the regulation of crucial neuronal processes such as vision and motor control. Additionally they have been implicated in many neurological conditions such as anxiety, schizophrenia, and drug dependence. R7 RGS proteins are key modulators of the pharmacological effects of drugs involved in the development of tolerance and addiction. In addition, RGS7 was found to bind a component of the synaptic fusion complex, snapin, and some other proteins outside of G protein signaling pathways. Length = 121

>gnl|CDD|188662 cd08707, RGS_Axin, Regulator of G protein signaling (RGS) domain found in the Axin protein

 Score = 36.7 bits (85), Expect = 6e-04
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKES-NPDVIEEKARFIYEDYI 113
           D  +LFR +L  E   + + FW AC   +K S + +   + A+ IY  YI
Sbjct: 9   DGIELFRTYLEQEGCADLLDFWFACNGFRKMSDSEEKRSKLAKAIYRRYI 58

The RGS (Regulator of G-protein Signaling) domain is an essential part of the Axin protein. Axin is a member of the RA/RGS subfamily of the RGS protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, and skeletal and muscle development. The RGS domain of Axin is specifically interacts with the heterotrimeric G-alpha12 protein, but not with closely related G-alpha13, and provides a unique tool to regulate G-alpha12-mediated signaling processes. The RGS domain of Axin also interacts with the tumor suppressor protein APC (Adenomatous Polyposis Coli) in order to control the cytoplasmic level of the proto-oncogene, beta-catenin. Length = 117

>gnl|CDD|188683 cd08728, RGS-like_2, Uncharacterized Regulator of G protein Signaling (RGS) domain subfamily, child 2

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 16/54 (29%), Positives = 25/54 (46%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQ 123
           F+ FL+   S+  +LFW+A E ++ E N    + K   I + Y     P  V  
Sbjct: 10  FKRFLKSRGSDGPLLFWIAVEKMRVEENEKEQKAKIELIVKRYFHGQDPPGVLL 63

These uncharacterized RGS-like domains consists largely of hypothetical proteins. The RGS domain is an essential part of the Regulator of G-protein Signaling (RGS) protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development. Several RGS proteins can fine-tune immune responses, while others play an important role in neuronal signal modulation. Some RGS proteins are the principal elements needed for proper vision. Length = 179

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	125
PF03392	95	OS-D: Insect pheromone-binding family, A10/OS-D; I	99.87
KOG3589|consensus	221		99.85
smart00315	118	RGS Regulator of G protein signalling domain. RGS	99.69
PF00615	118	RGS: Regulator of G protein signaling domain; Inte	99.6
PF09128	188	RGS-like: Regulator of G protein signalling-like d	97.9
KOG3590|consensus	602		97.09
KOG0986|consensus	591		97.03
KOG3590|consensus	602		96.0
PF04818	64	CTD_bind: RNA polymerase II-binding domain.; Inter	80.47

>PF03392 OS-D: Insect pheromone-binding family, A10/OS-D; InterPro: IPR005055 A class of small (14-20 Kd) water-soluble proteins, called odorant binding proteins (OBPs), first discovered in the insect sensillar lymph but also in the mucus of vertebrates, is postulated to mediate the solubilisation of hydrophobic odorant molecules, and thereby to facilitate their transport to the receptor neurons

Probab=99.87  E-value=2e-22  Score=134.14  Aligned_cols=58  Identities=48%  Similarity=0.978  Sum_probs=54.2

Q ss_pred             hhHHhhhhHHHHhcCccCCHHHHhHHHHHHHHHHhhChhHHHHHhhcCCCCchhhhhH
Q psy1257           2 SECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKF   59 (125)
Q Consensus         2 ~~~k~~lpea~~~~C~kCt~~Qk~~~~kvi~~l~~~~P~~W~~l~~k~dP~~~~v~kw   59 (125)
                      ++||++|||||+|+|+||||+||+++++|++||++++|+.|+.|..+|||+++|..+|
T Consensus        38 ~~lK~~ipeal~t~C~KCt~kQK~~~~kv~~~l~~~~P~~w~~l~~KyDp~~~y~~ky   95 (95)
T PF03392_consen   38 KELKKVIPEALKTNCAKCTPKQKENARKVIKFLKKNYPDEWEELVKKYDPEGKYRKKY   95 (95)
T ss_dssp             HHHHHHHHHHHHCTTTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TTHHHH
T ss_pred             HHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHCCCcchhhcC
Confidence            6899999999999999999999999999999999999999999999999999998875

The product of a gene expressed in the olfactory system of Drosophila melanogaster (Fruit fly), OS-D, shares features common to vertebrate odorant-binding proteins, but has a primary structure unlike odorant-binding proteins []. OS-D derivatives have subsequently been found in chemosensory organs of phylogenetically distinct insects, including cockroaches, phasmids and moths, suggesting that OS-D-like proteins seem to be conserved in the insect phylum.; PDB: 1KX9_A 1N8U_A 1KX8_A 1K19_A 1N8V_A 2GVS_A 2JNT_A.

>KOG3589|consensus

Probab=99.85  E-value=1.4e-21  Score=147.17  Aligned_cols=76  Identities=41%  Similarity=0.719  Sum_probs=72.6

Q ss_pred             CCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCH--HHHHHHHHHHHHHHcCCCCCCcc
Q psy1257          50 DPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNP--DVIEEKARFIYEDYISILSPKEV  121 (125)
Q Consensus        50 dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~--~~~~~~a~~Iy~~yi~~~sp~ev  121 (125)
                      .|..+++.+|+.||      +.|+..|..||++|||+|||+||+||++|++....  ..+...|+.||++||+++||.+|
T Consensus        68 ~~~~e~~~~w~~sf~~L~~~~~G~~~F~~fLk~e~Seeni~FW~ace~~k~~~~~~~~~~~~~a~~i~~~f~~~~ap~~v  147 (221)
T KOG3589|consen   68 LPSREEVESWAKSFEKLLADEAGRAVFAEFLKSEFSEENLEFWLACEEFKKRRSEKSTKMSEKAKEIYEEFSAPAAPKEV  147 (221)
T ss_pred             CCCHHHHHHHHHhHHHHhhChhhHHHHHHHHHHHhhHhHHHHHHHHHHHHhCcCchhhhhhHHHHHHHHHHhccCCCCCC
Confidence            78999999999999      99999999999999999999999999999998775  67899999999999999999999


Q ss_pred             CCCC
Q psy1257         122 TQDP  125 (125)
Q Consensus       122 Nid~  125 (125)
                      |||+
T Consensus       148 n~d~  151 (221)
T KOG3589|consen  148 NLDS  151 (221)
T ss_pred             CCch
Confidence            9996

>smart00315 RGS Regulator of G protein signalling domain

Probab=99.69  E-value=5.3e-17  Score=109.07  Aligned_cols=62  Identities=47%  Similarity=0.703  Sum_probs=59.3

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCCC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP  125 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid~  125 (125)
                      |.|+.+|++||++++|.|||.||.+|+.|+.......+...|+.||++||.++||.+|||++
T Consensus         9 ~~~~~~F~~fl~~~~~~e~l~F~~~v~~~~~~~~~~~~~~~a~~I~~~yi~~~s~~~~ni~~   70 (118)
T smart00315        9 PIGRLLFREFLESEFSEENLEFWLAVEEFKKAEDDEERIAKAREIYDKFLSPNAPKEVNLDS   70 (118)
T ss_pred             hHHHHHHHHHHHHhcchHhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCceeCCH
Confidence            88999999999999999999999999999999886788999999999999999999999974

RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits.

>PF00615 RGS: Regulator of G protein signaling domain; InterPro: IPR000342 RGS (Regulator of G Protein Signalling) proteins are multi-functional, GTPase-accelerating proteins that promote GTP hydrolysis by the alpha subunit of heterotrimeric G proteins, thereby inactivating the G protein and rapidly switching off G protein-coupled receptor signalling pathways []

Probab=99.60  E-value=2.7e-15  Score=99.92  Aligned_cols=62  Identities=35%  Similarity=0.599  Sum_probs=59.0

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCCC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP  125 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid~  125 (125)
                      |.|+.+|..||+++++.+||.||++|+.|++..+...+...|+.||++||+++||.+|||++
T Consensus         9 ~~~~~~F~~Fl~~~~~~~~l~F~~~v~~~~~~~~~~~~~~~a~~I~~~fi~~~s~~~l~i~~   70 (118)
T PF00615_consen    9 PEGLELFKEFLEKENCEENLQFWLEVEEFKSSESEEQRKKLAQQIYNKFISPGSPNELNIPS   70 (118)
T ss_dssp             HHHHHHHHHHHHHTTTTHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHHHTSTTSTTCCSSTH
T ss_pred             hHHHHHHHHHHhHCCCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHhcccccccccccH
Confidence            77999999999999999999999999999999777888999999999999999999999973

Upon activation by GPCRs, heterotrimeric G proteins exchange GDP for GTP, are released from the receptor, and dissociate into free, active GTP-bound alpha subunit and beta-gamma dimer, both of which activate downstream effectors. The response is terminated upon GTP hydrolysis by the alpha subunit (IPR001019 from INTERPRO), which can then bind the beta-gamma dimer (IPR001632 from INTERPRO, IPR001770 from INTERPRO) and the receptor. RGS proteins markedly reduce the lifespan of GTP-bound alpha subunits by stabilising the G protein transition state. All RGS proteins contain an 'RGS-box' (or RGS domain), which is required for activity. Some small RGS proteins such as RGS1 and RGS4 are comprised of little more than an RGS domain, while others also contain additional domains that confer further functionality []. RGS domains can be found in conjunction with a variety of domains, including: DEP for membrane targeting (IPR000591 from INTERPRO), PDZ for binding to GPCRs (IPR001478 from INTERPRO), PTB for phosphotyrosine-binding (IPR006020 from INTERPRO), RBD for Ras-binding (IPR003116 from INTERPRO), GoLoco for guanine nucleotide inhibitor activity (IPR003109 from INTERPRO), PX for phosphatidylinositol-binding (IPR001683 from INTERPRO), PXA that is associated with PX (IPR003114 from INTERPRO), PH for stimulating guanine nucleotide exchange (IPR001849 from INTERPRO), and GGL (G protein gamma subunit-like) for binding G protein beta subunits (IPR001770 from INTERPRO) []. Those RGS proteins that contain GGL domains can interact with G protein beta subunits to form novel dimers that prevent G protein gamma subunit binding and G protein alpha subunit association, thereby preventing heterotrimer formation.; GO: 0004871 signal transducer activity; PDB: 2BCJ_A 3PSC_A 3PVU_A 1YM7_B 3PVW_A 1OMW_A 2EBZ_A 2BV1_B 2GTP_D 1CMZ_A ....

>PF09128 RGS-like: Regulator of G protein signalling-like domain; InterPro: IPR015212 This entry represents a domain consisting of twelve helices that fold into a compact structure that contains the overall structural scaffold observed in other regulator of G protein signalling (RGS) proteins and three additional helical elements that pack closely to it

Probab=97.90  E-value=2.1e-05  Score=58.34  Aligned_cols=60  Identities=15%  Similarity=0.272  Sum_probs=48.4

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD  124 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid  124 (125)
                      |+-...|..|+-+.+.-.-|+|++-.+-|+.... +++++.|.+||.+||.++||..|+++
T Consensus        15 PaHlaVFl~yv~sq~dP~~LLfyL~~d~yk~~~~-Ke~rk~~~ei~stFL~~~ApL~v~v~   74 (188)
T PF09128_consen   15 PAHLAVFLNYVLSQFDPSPLLFYLIADLYKQGNA-KEMRKWAYEIHSTFLDPGAPLRVNVP   74 (188)
T ss_dssp             HHHHHHHHHHHHHHS-SHHHHHHHHHHHHTTS-T-TCHHHHHHHHHHHHTSTT-TT-----
T ss_pred             cHHHHHHHHHHHhcCCcchHHHHHHHHHHhccCH-HHHHHHHHHHHHHHcCCCCCceecCC
Confidence            7778999999999999999999999999999665 56899999999999999999999875

Helices 1-9 comprise the RGS fold, in which helices 4-7 form a classic antiparallel bundle adjacent to the other helices. Like other RGS structures, helices 7 and 8 span the length of the folded domain and form essentially one continuous helix with a kink in the middle. Helices 10-12 form an apparently stable C-terminal extension of the structural domain, and although other RGS proteins lack this structure, these elements are intimately associated with the rest of the structural framework by hydrophobic interactions. This domain binds to active G-alpha proteins, promoting GTP hydrolysis by the alpha subunit of heterotrimeric G proteins, thereby inactivating the G protein and rapidly switching off G protein-coupled receptor signalling pathways []. ; GO: 0005089 Rho guanyl-nucleotide exchange factor activity, 0005737 cytoplasm; PDB: 3CX6_B 3CX8_B 3CX7_B 1HTJ_F 1SHZ_C 3AB3_D 1IAP_A.

>KOG3590|consensus

Probab=97.09  E-value=0.00063  Score=56.07  Aligned_cols=61  Identities=20%  Similarity=0.450  Sum_probs=51.3

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCC-------CHHHHHHHHHHHHHHHcCCCCCCccCCC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKES-------NPDVIEEKARFIYEDYISILSPKEVTQD  124 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~-------~~~~~~~~a~~Iy~~yi~~~sp~evNid  124 (125)
                      ...+-+|.+||+++-..|-|.||++|..|++.-       +.++...-|-.||++|.+-.|.+.+.++
T Consensus       325 e~aLfyF~Ey~e~~~~~~~lqFwl~adnF~~~la~~E~~~d~~eAq~DAMilYdKYFSlQat~~l~~~  392 (602)
T KOG3590|consen  325 ESALFYFSEYMEKEDAVNILQFWLAADNFQSQLAAKEGQYDGQEAQNDAMILYDKYFSLQATHPLGFD  392 (602)
T ss_pred             hHHHHHHHHHHHHHhHHHHHHHHHHhhhHHHhhhhcccccchhhhhcchhHHHHHHhhhhccCccchh
Confidence            456779999999999999999999999999852       2235566788999999999999988765

>KOG0986|consensus

Probab=97.03  E-value=0.0012  Score=55.20  Aligned_cols=54  Identities=24%  Similarity=0.257  Sum_probs=44.2

Q ss_pred             cccHHHHHHHHHHh-hcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCC
Q psy1257          64 GDTYKLFREFLRCE-YSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSP  118 (125)
Q Consensus        64 ~~g~~~F~~FL~~e-~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp  118 (125)
                      |.|+.+|++||.+- --.--+.||.+|+.|-..++ +.+...|+.|++.||....+
T Consensus        61 pIGrlLFr~Fc~~~~~~~~~i~Fl~~v~eYE~~~~-~~r~~~~~~i~~~~l~~~~~  115 (591)
T KOG0986|consen   61 PIGRLLFRDFCENRPELRPAIEFLEEVKEYEKADD-DERKDKARQILDAYLMKELL  115 (591)
T ss_pred             cHHHHHHHHHHhcCchhhhHHHHHHHHHHHhcCCc-ccchhhHHHHHHHHhhcccc
Confidence            99999999999971 11224689999999999885 56789999999999996544

>KOG3590|consensus

Probab=96.00  E-value=0.012  Score=48.72  Aligned_cols=32  Identities=25%  Similarity=0.392  Sum_probs=30.0

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKE   95 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~   95 (125)
                      |..+.+|-+||...---.-|.||+++|.||+.
T Consensus       122 ~~~LSYFiQYLD~r~~L~LIKFwl~~E~FKs~  153 (602)
T KOG3590|consen  122 TIVLSYFIQYLDLRRMLHLIKFWLEAESFKST  153 (602)
T ss_pred             chHHHHHHHHHHHHhHHHHHHHHHhhhhhhHH
Confidence            88899999999999999999999999999985

>PF04818 CTD_bind: RNA polymerase II-binding domain

Probab=80.47  E-value=3.7  Score=24.54  Aligned_cols=36  Identities=8%  Similarity=0.183  Sum_probs=29.1

Q ss_pred             hhHHhhhhHHHHhcCccCCHHHHhHHHHHHHHHHhh
Q psy1257           2 SECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKD   37 (125)
Q Consensus         2 ~~~k~~lpea~~~~C~kCt~~Qk~~~~kvi~~l~~~   37 (125)
                      ..|...||+++...+....+..++.+.++++-..++
T Consensus        25 ~~F~~~l~~~~~~~~~~~~~~~~~kv~rll~iW~~r   60 (64)
T PF04818_consen   25 PAFSPVLPDAFAHAYKNVDPEVRKKVQRLLNIWEER   60 (64)
T ss_dssp             HHHHCCHHHHHHHHCCCS-HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhCC
Confidence            467889999999999888999999999998765543

; InterPro: IPR006903 This entry represents a conserved region found in a number of uncharacterised eukaryotic proteins.; PDB: 2L0I_A 2KM4_A 3D9I_B 3D9N_B 3D9O_A 3D9P_B 3D9K_A 3D9M_A 3D9J_A 3D9L_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	125
1zv4_X	158	Structure Of The Regulator Of G-Protein Signaling 1		4e-22
1cmz_A	152	Solution Structure Of Gaip (Galpha Interacting Prot		1e-19
2v4z_B	142	The Crystal Structure Of The Human G-Protein Subuni		2e-12
2af0_A	146	Structure Of The Regulator Of G-Protein Signaling D		1e-11
4ekc_B	137	Structure Of Human Regulator Of G Protein Signaling		1e-11
2dlv_A	140	Solution Structure Of The Rgs Domain Of Human Regul		1e-11
2jm5_A	151	Solution Structure Of The Rgs Domain From Human Rgs		1e-11
2crp_A	150	Solution Structure Of The Rgs Domain Of Regulator O		4e-11
2i59_A	138	Solution Structure Of Rgs10 Length = 138		4e-10
2dlr_A	149	Solution Structure Of The Rgs Domain Of Human Regul		5e-10
2ihb_B	153	Crystal Structure Of The Heterodimeric Complex Of H		5e-10
2oj4_A	127	Crystal Structure Of Rgs3 Rgs Domain Length = 127		7e-10
1agr_E	205	Complex Of Alf4-Activated Gi-Alpha-1 With Rgs4 Leng		7e-10
1ezt_A	166	High-Resolution Solution Structure Of Free Rgs4 By		1e-09
2ode_B	141	Crystal Structure Of The Heterodimeric Complex Of H		1e-09
2ihd_A	155	Crystal Structure Of Human Regulator Of G-Protein S		2e-09
3c7l_A	137	Molecular Architecture Of Galphao And The Structura		1e-08
3c7k_B	129	Molecular Architecture Of Galphao And The Structura		1e-08
2bt2_A	161	Structure Of The Regulator Of G-Protein Signaling 1		4e-08
2ik8_B	140	Crystal Structure Of The Heterodimeric Complex Of H		4e-08
2bv1_A	145	Regulator Of G-Protein Signalling 1 (Human) Length		1e-06
2jnu_A	154	Solution Structure Of The Rgs Domain Of Human Rgs14		7e-06
1kx8_A	112	Antennal Chemosensory Protein A6 From Mamestra Bras		3e-05
2gvs_A	109	Nmr Solution Structure Of Cspsg4 Length = 109		5e-05
1fqj_B	147	Crystal Structure Of The Heterotrimeric Complex Of		1e-04
2es0_A	148	Structure Of The Regulator Of G-Protein Signaling D		1e-04
1fqi_A	147	Rgs9 Rgs Domain Length = 147		1e-04
2jnt_A	108	Structure Of Bombyx Mori Chemosensory Protein 1 In		2e-04
2d9j_A	139	Solution Structure Of The Rgs Domain Of Regulator O		3e-04
2a72_A	146	Structure Of The Regulator Of G-Protein Signaling D		3e-04
2ebz_A	155	Solution Structure Of The Rgs Domain From Human Reg		3e-04
2pbi_A	424	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		7e-04

>pdb|1ZV4|X Chain X, Structure Of The Regulator Of G-Protein Signaling 17 (Rgsz2) Length = 158

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/88 (59%), Positives = 59/88 (67%), Gaps = 6/88 (6%)
Query: 43  KILLEKWDPKGEYTRKFQEKFGDTYK------LFREFLRCEYSEENILFWLACEDLKKES 96
            +  +  +P  E    + + F    K      LFREFLR EYSEEN+LFWLACEDLKKE 
Sbjct: 17  NLYFQSMNPTAEEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLKKEQ 76
Query: 97  NPDVIEEKARFIYEDYISILSPKEVTQD 124
           N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct: 77  NKKVIEEKARMIYEDYISILSPKEVSLD 104

>pdb|1CMZ|A Chain A, Solution Structure Of Gaip (Galpha Interacting Protein): A Regulator Of G Protein Signaling Length = 152

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 49/57 (85%)
Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
            +FR FLR EYSEEN+LFWLACE+LK E+N  V++EKAR IYEDY+SILSPKEV+ D
Sbjct: 35  SVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLD 91

>pdb|2V4Z|B Chain B, The Crystal Structure Of The Human G-Protein Subunit Alpha ( Gnai3) In Complex With An Engineered Regulator Of G- Protein Signaling Type 2 Domain (Rgs2) Length = 142

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 55  YTRKFQEKFGDTYKL--FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDY 112
           ++  F E     Y L  FR FL+ E+SEENI FWLACED KK  +P  +  KAR IY D+
Sbjct: 13  WSEAFDELLASKYGLAAFRAFLKSEFSEENIEFWLACEDFKKTKSPQKLSSKARKIYTDF 72
Query: 113 ISILSPKEVTQD 124
           I   +PKE+  D
Sbjct: 73  IEKEAPKEINID 84

>pdb|2AF0|A Chain A, Structure Of The Regulator Of G-Protein Signaling Domain Of Rgs2 Length = 146

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 55  YTRKFQEKFGDTYKL--FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDY 112
           ++  F E     Y L  FR FL+ E+ EENI FWLACED KK  +P  +  KAR IY D+
Sbjct: 23  WSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDF 82
Query: 113 ISILSPKEVTQD 124
           I   +PKE+  D
Sbjct: 83  IEKEAPKEINID 94

>pdb|4EKC|B Chain B, Structure Of Human Regulator Of G Protein Signaling 2 (rgs2) In Complex With Murine Galpha-q(r183c) Length = 137

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 55  YTRKFQEKFGDTYKL--FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDY 112
           ++  F E     Y L  FR FL+ E+ EENI FWLACED KK  +P  +  KAR IY D+
Sbjct: 14  WSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDF 73
Query: 113 ISILSPKEVTQD 124
           I   +PKE+  D
Sbjct: 74  IEKEAPKEINID 85

>pdb|2DLV|A Chain A, Solution Structure Of The Rgs Domain Of Human Regulator Of G-Protein Signaling 18 Length = 140

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%)
Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           D  + F  FL+ E+SEENI FW+ACED KK   P  I  KA+ IYE +I   +PKEV  D
Sbjct: 27  DGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLD 86

>pdb|2JM5|A Chain A, Solution Structure Of The Rgs Domain From Human Rgs18 Length = 151

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 38/60 (63%)
Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           D  + F  FL+ E+SEENI FW+ACED KK   P  I  KA+ IYE +I   +PKEV  D
Sbjct: 23  DGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLD 82

>pdb|2CRP|A Chain A, Solution Structure Of The Rgs Domain Of Regulator Of G- Protein Signalling 5 (Rgs 5) Length = 150

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F+ FL+ E+SEEN+ FW+ACED KK  +P  + EKA+ IYE++I   +PKEV  D
Sbjct: 42  FKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAPKEVNID 96

>pdb|2I59|A Chain A, Solution Structure Of Rgs10 Length = 138

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT 122
           K FREFL+ E+SEEN+LFWLACED KK  +   ++EKA+ IY  ++S  +  +V 
Sbjct: 26  KRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVN 80

>pdb|2DLR|A Chain A, Solution Structure Of The Rgs Domain Of Human Regulator Of G-Protein Signaling 10 Length = 149

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT 122
           K FREFL+ E+SEEN+LFWLACED KK  +   ++EKA+ IY  ++S  +  +V 
Sbjct: 30  KRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVN 84

>pdb|2IHB|B Chain B, Crystal Structure Of The Heterodimeric Complex Of Human Rgs10 And Activated Gi Alpha 3 Length = 153

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 68  KLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT 122
           K FREFL+ E+SEEN+LFWLACED KK  +   ++EKA+ IY  ++S  +  +V 
Sbjct: 46  KRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVN 100

>pdb|2OJ4|A Chain A, Crystal Structure Of Rgs3 Rgs Domain Length = 127

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP 125
           +F+ FLR E+SEEN+ FWLACED KK  +   +  KA+ I+ +YI+I + KEV  D 
Sbjct: 23  VFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDS 79

>pdb|1AGR|E Chain E, Complex Of Alf4-Activated Gi-Alpha-1 With Rgs4 Length = 205

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F+ FL+ EYSEENI FW++CE+ KK  +P  +  KA+ IY ++IS+ + KEV  D
Sbjct: 76  FKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLD 130

>pdb|1EZT|A Chain A, High-Resolution Solution Structure Of Free Rgs4 By Nmr Length = 166

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F+ FL+ EYSEENI FW++CE+ KK  +P  +  KA+ IY ++IS+ + KEV  D
Sbjct: 30  FKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLD 84

>pdb|2ODE|B Chain B, Crystal Structure Of The Heterodimeric Complex Of Human Rgs8 And Activated Gi Alpha 3 Length = 141

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           FR FL+ E+SEEN+ FWLACE+ KK  +   +  KA  I+E+++ + +P+EV  D
Sbjct: 31  FRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNID 85

>pdb|2IHD|A Chain A, Crystal Structure Of Human Regulator Of G-Protein Signaling 8, Rgs8 Length = 155

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           FR FL+ E+SEEN+ FWLACE+ KK  +   +  KA  I+E+++ + +P+EV  D
Sbjct: 52  FRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNID 106

>pdb|3C7L|A Chain A, Molecular Architecture Of Galphao And The Structural Basis For Rgs16-Mediated Deactivation Length = 137

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F  FL+ E+SEEN+ FWLACE+ KK  +   +  +A  I+++YI   +PKEV  D
Sbjct: 35  FHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFDEYIRSEAPKEVNID 89

>pdb|3C7K|B Chain B, Molecular Architecture Of Galphao And The Structural Basis For Rgs16-Mediated Deactivation Length = 129

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F  FL+ E+SEEN+ FWLACE+ KK  +   +  +A  I+++YI   +PKEV  D
Sbjct: 27  FHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFDEYIRSEAPKEVNID 81

>pdb|2BT2|A Chain A, Structure Of The Regulator Of G-Protein Signaling 16 Length = 161

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F  FL+ E+SEEN+ FWLACE+ KK  +   +  +A  I+E++I   +PKEV  D
Sbjct: 50  FHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEEFICSEAPKEVNID 104

>pdb|2IK8|B Chain B, Crystal Structure Of The Heterodimeric Complex Of Human Rgs16 And Activated Gi Alpha 1 Length = 140

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F  FL+ E+SEEN+ FWLACE+ KK  +   +  +A  I+E++I   +PKEV  D
Sbjct: 29  FHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEEFICSEAPKEVNID 83

>pdb|2BV1|A Chain A, Regulator Of G-Protein Signalling 1 (Human) Length = 145

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 69  LFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +F  FL+ E+SEENI FWLACED KK +  D++  KA  IY+ ++   + K++  D
Sbjct: 38  VFGSFLKSEFSEENIEFWLACEDYKK-TESDLLPCKAEEIYKAFVHSDAAKQINID 92

>pdb|2JNU|A Chain A, Solution Structure Of The Rgs Domain Of Human Rgs14 Length = 154

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 55  YTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLKK--ESNPDVIEEKARFIYEDY 112
           + R  Q+  G  Y  F EFL+ E+S EN+ FW ACE  ++   S+   + ++AR IY+++
Sbjct: 15  FERLLQDPLGLAY--FTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEF 72
Query: 113 IS--ILSPKEV 121
           +S   LSP  +
Sbjct: 73  LSSQALSPVNI 83

>pdb|1KX8|A Chain A, Antennal Chemosensory Protein A6 From Mamestra Brassicae, Tetragonal Form Length = 112

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 3   ECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEK 62
           E +E++   ++  C+KCT +Q   A  VI  L K+  E W+ L  K+DP G + +K++++
Sbjct: 42  ELKEHLQDAIENGCKKCTENQEKGAYRVIEHLIKNEIEIWRELTAKYDPTGNWRKKYEDR 101

>pdb|2GVS|A Chain A, Nmr Solution Structure Of Cspsg4 Length = 109

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 8   IPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEK 62
           IP  L   C KC   Q +    V++ L    P+ W  L  K+DP G Y++K++++
Sbjct: 49  IPDALSNECAKCNEKQKEGTKKVLKHLINHKPDVWAQLKAKYDPDGTYSKKYEDR 103

>pdb|1FQJ|B Chain B, Crystal Structure Of The Heterotrimeric Complex Of The Rgs Domain Of Rgs9, The Gamma Subunit Of Phosphodiesterase And The GtI1 CHIMERA ALPHA SUBUNIT [(RGS9)-(Pdegamma)- (GtI1ALPHA)-(Gdp)-(Alf4-)-(Mg2+)] Length = 147

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYIS 114
           F+ FLR E+S EN+ FW ACEDL K  +   ++EKA  IY+ +++
Sbjct: 38  FQHFLRKEFSGENLGFWEACEDL-KYGDQSKVKEKAEEIYKLFLA 81

>pdb|2ES0|A Chain A, Structure Of The Regulator Of G-Protein Signaling Domain Of Rgs6 Length = 148

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F  FL  E+S EN+ FWLA +DLKK+   DV  ++   I++++++  +P  +  D
Sbjct: 28  FLRFLESEFSSENLRFWLAVQDLKKQPLQDVA-KRVEEIWQEFLAPGAPSAINLD 81

>pdb|1FQI|A Chain A, Rgs9 Rgs Domain Length = 147

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYIS 114
           F+ FLR E+S EN+ FW ACEDL K  +   ++EKA  IY+ +++
Sbjct: 38  FQHFLRKEFSGENLGFWEACEDL-KYGDQSKVKEKAEEIYKLFLA 81

>pdb|2JNT|A Chain A, Structure Of Bombyx Mori Chemosensory Protein 1 In Solution Length = 108

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 3  ECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEK 62
          E ++++   L+T CEKCT +Q   A   I  L K+  E WK L   +DP G++ +K++++
Sbjct: 39 ELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKYEDR 98

>pdb|2D9J|A Chain A, Solution Structure Of The Rgs Domain Of Regulator Of G- Protein Signaling 7 Length = 139

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F +FL  E+S EN+ FWLA EDLKK    +V   + + I++++++  +P  +  D
Sbjct: 32  FLKFLESEFSSENLRFWLAVEDLKKRPIKEV-PSRVQEIWQEFLAPGAPSAINLD 85

>pdb|2A72|A Chain A, Structure Of The Regulator Of G-Protein Signaling Domain Of Rgs7 Length = 146

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           F +FL  E+S EN+ FWLA EDLKK    +V   + + I++++++  +P  +  D
Sbjct: 30  FLKFLESEFSSENLRFWLAVEDLKKRPIKEV-PSRVQEIWQEFLAPGAPSAINLD 83

>pdb|2EBZ|A Chain A, Solution Structure Of The Rgs Domain From Human Regulator Of G-Protein Signaling 12 (Rgs12) Length = 155

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 55 YTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACE 90
          + R  Q+  G  Y  F +FLR E+SEENILFW ACE
Sbjct: 19 FERLLQDPVGVRY--FSDFLRKEFSEENILFWQACE 52

>pdb|2PBI|A Chain A, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 424

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 23/81 (28%)
Query: 43  KILLEKW---------DPKGEYTRKFQEKFGDTYKLFREFLRCEYSEENILFWLACEDLK 93
           K+ +E+W         DPKG  +             F+ FL+ E+S EN+ FW ACEDL 
Sbjct: 292 KMRVERWAFNFSELIRDPKGRQS-------------FQYFLKKEFSGENLGFWEACEDL- 337
Query: 94  KESNPDVIEEKARFIYEDYIS 114
           K  +   ++EKA  IY+ +++
Sbjct: 338 KYGDQSKVKEKAEEIYKLFLA 358

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	125
2ihd_A	155	RGS8, regulator of G-protein signaling 8; signalin	2e-15
2dlr_A	149	RGS10, regulator of G-protein signaling 10; RGS do	2e-15
1cmz_A	152	Protein (GAIP (G-alpha interacting) protein); RGS,	4e-15
1zv4_X	158	RGS17, regulator of G-protein signaling 17; human	6e-15
1k19_A	112	Chemosensory protein CSP2; pheromone, lipid transp	1e-14
2ihb_B	153	Regulator of G-protein signalling 10, guanine nucl	2e-14
2gvs_A	109	Chemosensory protein CSP-SG4; alpha-coil, lipid bi	2e-14
2crp_A	150	RGS5, regulator of G-protein signaling 5; RGS doma	2e-14
3c7l_A	137	Regulator of G-protein signaling 16; RGS, RGS16, G	3e-14
2jnu_A	154	RGS14, regulator of G-protein signaling 14; regula	3e-14
2dlv_A	140	RGS18, regulator of G-protein signaling 18; RGS do	4e-14
2ebz_A	155	RGS12, regulator of G-protein signaling 12; RGS do	8e-14
2jm5_A	151	RGS18, regulator of G-protein signaling 18; signal	8e-14
2bv1_A	145	Regulator of G-protein signalling 1; RGS1, RGS, st	9e-14
2af0_A	146	Regulator of G-protein signaling 2; helix, structu	1e-13
2a72_A	146	Regulator of G-protein signalling 7; human RGS7, r	2e-13
2oj4_A	127	RGS3, regulator of G-protein signaling 3, RGP3; RG	2e-13
1agr_E	205	RGS4; GI-alpha-1, hydrolase, signal transduction,	5e-13
1fqi_A	147	RGS9, regulator of G-protein signaling 9; phototra	9e-13
2pbi_A	424	Regulator of G-protein signaling 9; helix WRAP, RG	1e-12
1dk8_A	147	Axin; alpha-helix, PI-helix, signaling protein; HE	2e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>2ihd_A RGS8, regulator of G-protein signaling 8; signaling protein, structural genomics, structura genomics consortium, SGC, signaling protein; 1.70A {Homo sapiens} PDB: 2ode_B* 2bt2_A Length = 155

 Score = 67.3 bits (164), Expect = 2e-15
 Identities = 25/61 (40%), Positives = 38/61 (62%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
                FR FL+ E+SEEN+ FWLACE+ KK  +   +  KA  I+E+++ + +P+EV  D
Sbjct: 47  YGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNID 106

Query: 125 P 125
            
Sbjct: 107 F 107

>2dlr_A RGS10, regulator of G-protein signaling 10; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 149

 Score = 66.9 bits (163), Expect = 2e-15
 Identities = 28/60 (46%), Positives = 41/60 (68%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +  K FREFL+ E+SEEN+LFWLACED KK  +   ++EKA+ IY  ++S  +  +V  +
Sbjct: 27  EGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVNVE 86

>1cmz_A Protein (GAIP (G-alpha interacting) protein); RGS, regulator of G protein, signaling protein regulation; NMR {Homo sapiens} SCOP: a.91.1.1 Length = 152

 Score = 66.2 bits (161), Expect = 4e-15
 Identities = 41/61 (67%), Positives = 49/61 (80%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
               +FR FLR EYSEEN+LFWLACE+LK E+N  V++EKAR IYEDY+SILSPKEV+ D
Sbjct: 32  AGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLD 91

Query: 125 P 125
            
Sbjct: 92  S 92

>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens} Length = 158

 Score = 65.8 bits (160), Expect = 6e-15
 Identities = 48/60 (80%), Positives = 50/60 (83%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
               LFREFLR EYSEEN+LFWLACEDLKKE N  VIEEKAR IYEDYISILSPKEV+ D
Sbjct: 45  AGRNLFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILSPKEVSLD 104

>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A Length = 112

 Score = 64.1 bits (156), Expect = 1e-14
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 1   MSECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQ 60
             E +E++   ++  C+KCT +Q   A  VI  L K+  E W+ L  K+DP G + +K++
Sbjct: 40  GKELKEHLQDAIENGCKKCTENQEKGAYRVIEHLIKNEIEIWRELTAKYDPTGNWRKKYE 99

Query: 61  EK 62
           ++
Sbjct: 100 DR 101

>2ihb_B Regulator of G-protein signalling 10, guanine nucleotide-binding protein G(K) subunit A; RGS, heterotrimeric G protein, signall complex; HET: GDP; 2.71A {Homo sapiens} PDB: 2i59_A Length = 153

 Score = 64.7 bits (157), Expect = 2e-14
 Identities = 28/60 (46%), Positives = 41/60 (68%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +  K FREFL+ E+SEEN+LFWLACED KK  +   ++EKA+ IY  ++S  +  +V  +
Sbjct: 43  EGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVNVE 102

>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria} Length = 109

 Score = 63.4 bits (154), Expect = 2e-14
 Identities = 19/62 (30%), Positives = 31/62 (50%)

Query: 1   MSECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQ 60
             E +  IP  L   C KC   Q +    V++ L    P+ W  L  K+DP G Y++K++
Sbjct: 42  GKELKSVIPDALSNECAKCNEKQKEGTKKVLKHLINHKPDVWAQLKAKYDPDGTYSKKYE 101

Query: 61  EK 62
           ++
Sbjct: 102 DR 103

>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 150

 Score = 64.3 bits (156), Expect = 2e-14
 Identities = 29/61 (47%), Positives = 40/61 (65%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
                F+ FL+ E+SEEN+ FW+ACED KK  +P  + EKA+ IYE++I   +PKEV  D
Sbjct: 37  YGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAPKEVNID 96

Query: 125 P 125
            
Sbjct: 97  H 97

>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B* Length = 137

 Score = 63.5 bits (154), Expect = 3e-14
 Identities = 25/61 (40%), Positives = 37/61 (60%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +    F  FL+ E+SEEN+ FWLACE+ KK  +   +  +A  I+++YI   +PKEV  D
Sbjct: 30  NGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFDEYIRSEAPKEVNID 89

Query: 125 P 125
            
Sbjct: 90  H 90

>2jnu_A RGS14, regulator of G-protein signaling 14; regulator of G-protein signalling domain, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} Length = 154

 Score = 63.9 bits (155), Expect = 3e-14
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKK--ESNPDVIEEKARFIYEDYISILSPKEVT 122
                F EFL+ E+S EN+ FW ACE  ++   S+   + ++AR IY++++S  +   V 
Sbjct: 23  LGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEFLSSQALSPVN 82

Query: 123 QD 124
            D
Sbjct: 83  ID 84

>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 140

 Score = 63.5 bits (154), Expect = 4e-14
 Identities = 31/61 (50%), Positives = 38/61 (62%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           D  + F  FL+ E+SEENI FW+ACED KK   P  I  KA+ IYE +I   +PKEV  D
Sbjct: 27  DGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLD 86

Query: 125 P 125
            
Sbjct: 87  F 87

>2ebz_A RGS12, regulator of G-protein signaling 12; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 155

 Score = 62.8 bits (152), Expect = 8e-14
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLK--KESNPDVIEEKARFIYEDYISILSPKEVT 122
              + F +FLR E+SEENILFW ACE        +   +  +AR I+  ++   +   V 
Sbjct: 27  VGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATTPVN 86

Query: 123 QD 124
            D
Sbjct: 87  ID 88

>2jm5_A RGS18, regulator of G-protein signaling 18; signaling protein, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} SCOP: a.91.1.1 PDB: 2owi_A Length = 151

 Score = 62.7 bits (152), Expect = 8e-14
 Identities = 31/61 (50%), Positives = 38/61 (62%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           D  + F  FL+ E+SEENI FW+ACED KK   P  I  KA+ IYE +I   +PKEV  D
Sbjct: 23  DGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLD 82

Query: 125 P 125
            
Sbjct: 83  F 83

>2bv1_A Regulator of G-protein signalling 1; RGS1, RGS, structural genomics, struct genomics consortium, B-cell activation, phosphorylation; 2.0A {Homo sapiens} PDB: 2gtp_C* Length = 145

 Score = 62.7 bits (152), Expect = 9e-14
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
               +F  FL+ E+SEENI FWLACED KK +  D++  KA  IY+ ++   + K++  D
Sbjct: 34  TGQNVFGSFLKSEFSEENIEFWLACEDYKK-TESDLLPCKAEEIYKAFVHSDAAKQINID 92

Query: 125 P 125
            
Sbjct: 93  F 93

>2af0_A Regulator of G-protein signaling 2; helix, structural genomics, structural genomics consortium, SGC, signaling protein; 2.30A {Homo sapiens} PDB: 2v4z_B* Length = 146

 Score = 62.3 bits (151), Expect = 1e-13
 Identities = 30/61 (49%), Positives = 37/61 (60%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
                FR FL+ E+ EENI FWLACED KK  +P  +  KAR IY D+I   +PKE+  D
Sbjct: 35  YGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINID 94

Query: 125 P 125
            
Sbjct: 95  F 95

>2a72_A Regulator of G-protein signalling 7; human RGS7, regulator of G-protein signaling 7, GTPase-activ proteins (GAP), structural genomics; 2.00A {Homo sapiens} PDB: 2d9j_A 2es0_A Length = 146

 Score = 61.9 bits (150), Expect = 2e-13
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
              + F +FL  E+S EN+ FWLA EDLKK      +  + + I++++++  +P  +  D
Sbjct: 25  VGREQFLKFLESEFSSENLRFWLAVEDLKKRPI-KEVPSRVQEIWQEFLAPGAPSAINLD 83

Query: 125 P 125
            
Sbjct: 84  S 84

>2oj4_A RGS3, regulator of G-protein signaling 3, RGP3; RGS domain, signaling protein inhibitor; 2.30A {Homo sapiens} Length = 127

 Score = 61.5 bits (149), Expect = 2e-13
 Identities = 28/61 (45%), Positives = 39/61 (63%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
               +F+ FLR E+SEEN+ FWLACED KK  +   +  KA+ I+ +YI+I + KEV  D
Sbjct: 19  YGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLD 78

Query: 125 P 125
            
Sbjct: 79  S 79

>1agr_E RGS4; GI-alpha-1, hydrolase, signal transduction, complex (signal transduction/regulator), GTP-binding, GTPase activating protein; HET: GDP CIT; 2.80A {Rattus norvegicus} SCOP: a.91.1.1 PDB: 1ezt_A 1ezy_A Length = 205

 Score = 61.7 bits (149), Expect = 5e-13
 Identities = 27/59 (45%), Positives = 39/59 (66%)

Query: 67  YKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP 125
              F+ FL+ EYSEENI FW++CE+ KK  +P  +  KA+ IY ++IS+ + KEV  D 
Sbjct: 73  LAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDS 131

>1fqi_A RGS9, regulator of G-protein signaling 9; phototransduction, ROD, GAP, signaling protein; 1.94A {Bos taurus} SCOP: a.91.1.1 PDB: 1fqj_B* 1fqk_B* Length = 147

 Score = 60.1 bits (145), Expect = 9e-13
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
              + F+ FLR E+S EN+ FW ACEDLK   +   ++EKA  IY+ +++  + + +  D
Sbjct: 33  KGRQSFQHFLRKEFSGENLGFWEACEDLKY-GDQSKVKEKAEEIYKLFLAPGARRWINID 91

Query: 125 P 125
            
Sbjct: 92  G 92

>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 424

 Score = 62.1 bits (150), Expect = 1e-12
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
              + F+ FL+ E+S EN+ FW ACEDLK   +   ++EKA  IY+ +++  + + +  D
Sbjct: 310 KGRQSFQYFLKKEFSGENLGFWEACEDLKY-GDQSKVKEKAEEIYKLFLAPGARRWINID 368

Query: 125 P 125
            
Sbjct: 369 G 369

>1dk8_A Axin; alpha-helix, PI-helix, signaling protein; HET: SO4; 1.57A {Homo sapiens} SCOP: a.91.1.1 PDB: 1emu_A Length = 147

 Score = 56.2 bits (135), Expect = 2e-11
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEK----ARFIYEDYISILSPKE 120
           D   LFR FL+ E   + + FW AC   +K    D  EEK    AR IY  YI   +   
Sbjct: 24  DGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKYILDNNGIV 83

Query: 121 VTQDP 125
             Q  
Sbjct: 84  SRQTK 88

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 36.8 bits (84), Expect = 9e-04
 Identities = 29/196 (14%), Positives = 50/196 (25%), Gaps = 84/196 (42%)

Query: 1   MSECR--ENIPTVLQTLCEKCTPS-------------QTDKAVMVIRRL--KKDYPEEWK 43
           +  C   E +  +LQ L  +  P+             +       +RRL   K Y     
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248

Query: 44  ILLEKWDPK--------------------------GEYTRKFQEKFGDTY------KLFR 71
           +LL   + K                             T    +    T        L  
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 72  EFLRCEYSEENILFWLACEDLKKES---NPDVI--------EEKARFIY----------- 109
           ++L C             +DL +E    NP  +        +  A +             
Sbjct: 309 KYLDCR-----------PQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 110 --EDYISILSPKEVTQ 123
             E  +++L P E  +
Sbjct: 358 IIESSLNVLEPAEYRK 373

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	125
2gvs_A	109	Chemosensory protein CSP-SG4; alpha-coil, lipid bi	99.89
1k19_A	112	Chemosensory protein CSP2; pheromone, lipid transp	99.88
2af0_A	146	Regulator of G-protein signaling 2; helix, structu	99.88
2oj4_A	127	RGS3, regulator of G-protein signaling 3, RGP3; RG	99.87
3c7l_A	137	Regulator of G-protein signaling 16; RGS, RGS16, G	99.87
2dlv_A	140	RGS18, regulator of G-protein signaling 18; RGS do	99.87
1fqi_A	147	RGS9, regulator of G-protein signaling 9; phototra	99.87
2crp_A	150	RGS5, regulator of G-protein signaling 5; RGS doma	99.87
1zv4_X	158	RGS17, regulator of G-protein signaling 17; human	99.87
2jnu_A	154	RGS14, regulator of G-protein signaling 14; regula	99.86
1cmz_A	152	Protein (GAIP (G-alpha interacting) protein); RGS,	99.86
2ihb_B	153	Regulator of G-protein signalling 10, guanine nucl	99.86
2ihd_A	155	RGS8, regulator of G-protein signaling 8; signalin	99.86
2jm5_A	151	RGS18, regulator of G-protein signaling 18; signal	99.86
2ebz_A	155	RGS12, regulator of G-protein signaling 12; RGS do	99.86
2dlr_A	149	RGS10, regulator of G-protein signaling 10; RGS do	99.86
2a72_A	146	Regulator of G-protein signalling 7; human RGS7, r	99.86
2bv1_A	145	Regulator of G-protein signalling 1; RGS1, RGS, st	99.85
1agr_E	205	RGS4; GI-alpha-1, hydrolase, signal transduction,	99.83
1dk8_A	147	Axin; alpha-helix, PI-helix, signaling protein; HE	99.83
2pbi_A	424	Regulator of G-protein signaling 9; helix WRAP, RG	99.81
3cx8_B	203	RHO guanine nucleotide exchange factor 11; signal	97.96
1iap_A	211	Guanine nucleotide exchange factor P115rhogef; RGS	97.77
3ab3_B	246	RHO guanine nucleotide exchange factor 1; signal t	97.4
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	96.53
4gou_A	518	EHRGS-rhogef; RGS domain, DH domain, PH domain, RH	96.51
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	96.18
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	86.06

>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}

Probab=99.89  E-value=1.7e-23  Score=141.08  Aligned_cols=62  Identities=31%  Similarity=0.686  Sum_probs=59.8

Q ss_pred             hhHHhhhhHHHHhcCccCCHHHHhHHHHHHHHHHhhChhHHHHHhhcCCCCchhhhhHHhhh
Q psy1257           2 SECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEKF   63 (125)
Q Consensus         2 ~~~k~~lpea~~~~C~kCt~~Qk~~~~kvi~~l~~~~P~~W~~l~~k~dP~~~~v~kw~~s~   63 (125)
                      ++||++|||||+|+|+||||+||+++++||+||++++|+.|+.|..+|||+++|..++...+
T Consensus        43 k~lK~~lpeAl~t~C~KCTekQK~~~~kvi~~l~~n~P~~W~~L~~KyDP~g~y~~ky~~~~  104 (109)
T 2gvs_A           43 KELKSVIPDALSNECAKCNEKQKEGTKKVLKHLINHKPDVWAQLKAKYDPDGTYSKKYEDRE  104 (109)
T ss_dssp             HHHHHHTTHHHHSTTTTSCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCTTCTTTHHHHTTT
T ss_pred             HHHHHHhHHHHhccCCCCCHHHHHHHHHHHHHHHHcChHHHHHHHHHHCCCchHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999998765

>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A

Probab=99.88  E-value=2.4e-23  Score=140.93  Aligned_cols=62  Identities=32%  Similarity=0.646  Sum_probs=59.7

Q ss_pred             hhHHhhhhHHHHhcCccCCHHHHhHHHHHHHHHHhhChhHHHHHhhcCCCCchhhhhHHhhh
Q psy1257           2 SECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEKF   63 (125)
Q Consensus         2 ~~~k~~lpea~~~~C~kCt~~Qk~~~~kvi~~l~~~~P~~W~~l~~k~dP~~~~v~kw~~s~   63 (125)
                      ++||++|||||+|+|+||||+||+++++|++||++++|+.|+.|..+|||+++|..++...+
T Consensus        41 k~lK~~lpeAl~t~C~KCTekQK~~~~kvi~~l~~n~P~~W~~L~~KyDP~g~y~~~y~~~~  102 (112)
T 1k19_A           41 KELKEHLQDAIENGCKKCTENQEKGAYRVIEHLIKNEIEIWRELTAKYDPTGNWRKKYEDRA  102 (112)
T ss_dssp             HHHHHHHHHHTTTTCTTSCSHHHHHHHHHHHHHHHHHSCHHHHHHHSSTTTCSSHHHHHHHH
T ss_pred             HHHHHHhHHHHhccCCCCCHHHHHHHHHHHHHHHHcChHHHHHHHHHHCCCchHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999887765

>2af0_A Regulator of G-protein signaling 2; helix, structural genomics, structural genomics consortium, SGC, signaling protein; 2.30A {Homo sapiens} PDB: 2v4z_B*

Probab=99.88  E-value=1.1e-22  Score=142.71  Aligned_cols=79  Identities=43%  Similarity=0.738  Sum_probs=74.2

Q ss_pred             hcCCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCc
Q psy1257          47 EKWDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKE  120 (125)
Q Consensus        47 ~k~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~e  120 (125)
                      ....|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|++..+..++...|+.||++||+++||.+
T Consensus        11 ~~~~~s~~~~~~w~~sl~~iL~~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~e   90 (146)
T 2af0_A           11 QSMKPSPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKE   90 (146)
T ss_dssp             HHTSCCHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSTTCTTC
T ss_pred             ccCCCCHHHHHHHHhHHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCcCCCCcc
Confidence            34579999999999999      999999999999999999999999999999998777889999999999999999999


Q ss_pred             cCCCC
Q psy1257         121 VTQDP  125 (125)
Q Consensus       121 vNid~  125 (125)
                      ||||+
T Consensus        91 vNi~~   95 (146)
T 2af0_A           91 INIDF   95 (146)
T ss_dssp             CCCCH
T ss_pred             cCcCH
Confidence            99984

>2oj4_A RGS3, regulator of G-protein signaling 3, RGP3; RGS domain, signaling protein inhibitor; 2.30A {Homo sapiens}

Probab=99.87  E-value=1.3e-22  Score=138.74  Aligned_cols=72  Identities=43%  Similarity=0.710  Sum_probs=67.8

Q ss_pred             hhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCCC
Q psy1257          54 EYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP  125 (125)
Q Consensus        54 ~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid~  125 (125)
                      +.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|++..+..++...|+.||++||+++||.+||||+
T Consensus         2 ~~~~~w~~sl~~iL~~~~g~~~F~~Fl~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~a~~I~~~yi~~~s~~evni~~   79 (127)
T 2oj4_A            2 EEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDS   79 (127)
T ss_dssp             THHHHHTTCHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCH
T ss_pred             HHHHHHHhHHHHHHCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHccCCCCcCccCCH
Confidence            4578999999      99999999999999999999999999999998777788999999999999999999999984

>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B*

Probab=99.87  E-value=1.5e-22  Score=140.81  Aligned_cols=77  Identities=36%  Similarity=0.657  Sum_probs=68.3

Q ss_pred             CCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccC
Q psy1257          49 WDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT  122 (125)
Q Consensus        49 ~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evN  122 (125)
                      ..|+...+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|+...+..++...|+.||++||+++||.+||
T Consensus         8 ~~~~~~~~~~w~~sl~~iL~~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evN   87 (137)
T 3c7l_A            8 HGSFSEDVLGWRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFDEYIRSEAPKEVN   87 (137)
T ss_dssp             ------CHHHHHHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCC
T ss_pred             CCCChHHHHHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCCccCC
Confidence            457788899999999      99999999999999999999999999999999887788999999999999999999999


Q ss_pred             CCC
Q psy1257         123 QDP  125 (125)
Q Consensus       123 id~  125 (125)
                      ||+
T Consensus        88 i~~   90 (137)
T 3c7l_A           88 IDH   90 (137)
T ss_dssp             CCH
T ss_pred             CCH
Confidence            984

>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=1.3e-22  Score=141.08  Aligned_cols=77  Identities=45%  Similarity=0.716  Sum_probs=72.6

Q ss_pred             CCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccC
Q psy1257          49 WDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT  122 (125)
Q Consensus        49 ~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evN  122 (125)
                      ..|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|+.|++..+..++...|+.||++||+++||.+||
T Consensus         5 ~~~~~~~~~~w~~sl~~iL~~~~~~~~F~~Fl~~e~s~enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evn   84 (140)
T 2dlv_A            5 SSGSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVN   84 (140)
T ss_dssp             CCCCHHHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSTTCCC
T ss_pred             CCCCHHHHHHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCccccC
Confidence            468889999999999      99999999999999999999999999999998876788999999999999999999999


Q ss_pred             CCC
Q psy1257         123 QDP  125 (125)
Q Consensus       123 id~  125 (125)
                      ||+
T Consensus        85 i~~   87 (140)
T 2dlv_A           85 LDF   87 (140)
T ss_dssp             CCH
T ss_pred             CcH
Confidence            984

>1fqi_A RGS9, regulator of G-protein signaling 9; phototransduction, ROD, GAP, signaling protein; 1.94A {Bos taurus} SCOP: a.91.1.1 PDB: 1fqj_B* 1fqk_B*

Probab=99.87  E-value=1.4e-22  Score=142.45  Aligned_cols=84  Identities=30%  Similarity=0.459  Sum_probs=72.5

Q ss_pred             HHHHHhh-cCCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHc
Q psy1257          41 EWKILLE-KWDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYI  113 (125)
Q Consensus        41 ~W~~l~~-k~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi  113 (125)
                      .|+.... ...|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|+..+. .++...|+.||++||
T Consensus         2 ~w~~~~~~~~~p~~~~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~enl~Fw~~ve~~k~~~~-~~~~~~a~~Iy~~yi   80 (147)
T 1fqi_A            2 FWDLNAKLVDIPTKMRVERWAFNFSELIRDPKGRQSFQHFLRKEFSGENLGFWEACEDLKYGDQ-SKVKEKAEEIYKLFL   80 (147)
T ss_dssp             ------CCCCCCCHHHHHHTTTCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTSCG-GGHHHHHHHHHHHHT
T ss_pred             ccccCCCCCCCCCHHHHHHHHhHHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHc
Confidence            5765554 4689999999999999      9999999999999999999999999999999764 568899999999999


Q ss_pred             CCCCCCccCCCC
Q psy1257         114 SILSPKEVTQDP  125 (125)
Q Consensus       114 ~~~sp~evNid~  125 (125)
                      +++||.+||||+
T Consensus        81 ~~~s~~evni~~   92 (147)
T 1fqi_A           81 APGARRWINIDG   92 (147)
T ss_dssp             STTCTTCCCCCH
T ss_pred             CCCCCcccCCCH
Confidence            999999999984

>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=2e-22  Score=141.98  Aligned_cols=77  Identities=38%  Similarity=0.677  Sum_probs=72.9

Q ss_pred             CCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccC
Q psy1257          49 WDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT  122 (125)
Q Consensus        49 ~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evN  122 (125)
                      .+|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|++..+..++...|+.||++||+++||.+||
T Consensus        15 ~~~s~~~~~~w~~sl~~iL~~~~g~~~F~~Fl~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evN   94 (150)
T 2crp_A           15 QKTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAPKEVN   94 (150)
T ss_dssp             CCCCHHHHTHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCCTTHHHHHHHHHHHHTSSTTCSSCCS
T ss_pred             CCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHccCCCCccCC
Confidence            478999999999999      99999999999999999999999999999998876678999999999999999999999


Q ss_pred             CCC
Q psy1257         123 QDP  125 (125)
Q Consensus       123 id~  125 (125)
                      ||+
T Consensus        95 i~~   97 (150)
T 2crp_A           95 IDH   97 (150)
T ss_dssp             CCH
T ss_pred             CCH
Confidence            984

>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens}

Probab=99.87  E-value=2.4e-22  Score=143.21  Aligned_cols=78  Identities=65%  Similarity=1.035  Sum_probs=72.7

Q ss_pred             cCCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCcc
Q psy1257          48 KWDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEV  121 (125)
Q Consensus        48 k~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~ev  121 (125)
                      ...|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|++..+...+...|+.||++||+++||.+|
T Consensus        22 ~~~~~~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~ev  101 (158)
T 1zv4_X           22 SMNPTAEEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILSPKEV  101 (158)
T ss_dssp             TSSCCHHHHHHHTTCHHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTCCC-CCCC
T ss_pred             CCCCCHHHHHHHHhhHHHHhCCHHHHHHHHHHHHHccCHhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHCCCCCCcee
Confidence            3578899999999999      9999999999999999999999999999999988778899999999999999999999


Q ss_pred             CCCC
Q psy1257         122 TQDP  125 (125)
Q Consensus       122 Nid~  125 (125)
                      |||+
T Consensus       102 Ni~~  105 (158)
T 1zv4_X          102 SLDS  105 (158)
T ss_dssp             CCCH
T ss_pred             ecCH
Confidence            9984

>2jnu_A RGS14, regulator of G-protein signaling 14; regulator of G-protein signalling domain, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}

Probab=99.86  E-value=2.1e-22  Score=142.53  Aligned_cols=76  Identities=28%  Similarity=0.495  Sum_probs=71.0

Q ss_pred             CCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCC--HHHHHHHHHHHHHHHcCCCCCCcc
Q psy1257          50 DPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESN--PDVIEEKARFIYEDYISILSPKEV  121 (125)
Q Consensus        50 dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~--~~~~~~~a~~Iy~~yi~~~sp~ev  121 (125)
                      -|+...+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|++..+  ...+...|+.||++||+++||.+|
T Consensus         2 ~p~~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~~~Enl~Fw~~ve~~k~~~~~~~~~~~~~a~~Iy~~yi~~~s~~ev   81 (154)
T 2jnu_A            2 MTEEQPVASWALSFERLLQDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEFLSSQALSPV   81 (154)
T ss_dssp             CSSCCSGGGGGTCHHHHHHSHHHHHHHHHHTTTSSCTHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHTSTTCSSCC
T ss_pred             CCchHhHHHHHHhHHHHHCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHcCCCCCccc
Confidence            48889999999999      9999999999999999999999999999999864  457889999999999999999999


Q ss_pred             CCCC
Q psy1257         122 TQDP  125 (125)
Q Consensus       122 Nid~  125 (125)
                      |||+
T Consensus        82 ni~~   85 (154)
T 2jnu_A           82 NIDR   85 (154)
T ss_dssp             CSCC
T ss_pred             CCcH
Confidence            9985

>1cmz_A Protein (GAIP (G-alpha interacting) protein); RGS, regulator of G protein, signaling protein regulation; NMR {Homo sapiens} SCOP: a.91.1.1

Probab=99.86  E-value=2.5e-22  Score=141.64  Aligned_cols=77  Identities=57%  Similarity=0.953  Sum_probs=71.5

Q ss_pred             CCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccC
Q psy1257          49 WDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT  122 (125)
Q Consensus        49 ~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evN  122 (125)
                      -.|+.+.+.+|..+|      |.|+.+|++||++|+|+|||.||++|+.|++..+...+...|+.||++||+++||.+||
T Consensus        10 ~~p~~~~~~~~~~sl~~iL~~p~~~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evn   89 (152)
T 1cmz_A           10 GIPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVS   89 (152)
T ss_dssp             --CCHHHHHHHTTCSHHHHSSHHHHHHHHHHHHHHTCCHHHHHHHHHHHGGGTCCSHHHHHHHHHHHHHTTTCSSSCCCS
T ss_pred             CCCCHHHHHHHHhhHHHHHCChHHHHHHHHHHHHhcChhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCceee
Confidence            368888999999999      99999999999999999999999999999998776788999999999999999999999


Q ss_pred             CCC
Q psy1257         123 QDP  125 (125)
Q Consensus       123 id~  125 (125)
                      ||+
T Consensus        90 i~~   92 (152)
T 1cmz_A           90 LDS   92 (152)
T ss_dssp             CCS
T ss_pred             CCH
Confidence            985

>2ihb_B Regulator of G-protein signalling 10, guanine nucleotide-binding protein G(K) subunit A; RGS, heterotrimeric G protein, signall complex; HET: GDP; 2.71A {Homo sapiens} PDB: 2i59_A

Probab=99.86  E-value=4.8e-22  Score=140.59  Aligned_cols=78  Identities=38%  Similarity=0.628  Sum_probs=70.5

Q ss_pred             cCCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCcc
Q psy1257          48 KWDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEV  121 (125)
Q Consensus        48 k~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~ev  121 (125)
                      .-.|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|+.|+...+...+...|+.||++||+++||.+|
T Consensus        20 ~~~~~~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~ev   99 (153)
T 2ihb_B           20 SSHQSLKSTAKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQV   99 (153)
T ss_dssp             -----CHHHHHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSTTCTTCC
T ss_pred             CCCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCCCCccC
Confidence            3478899999999999      9999999999999999999999999999999988778899999999999999999999


Q ss_pred             CCCC
Q psy1257         122 TQDP  125 (125)
Q Consensus       122 Nid~  125 (125)
                      |||+
T Consensus       100 Ni~~  103 (153)
T 2ihb_B          100 NVEG  103 (153)
T ss_dssp             CCCC
T ss_pred             CCCH
Confidence            9985

>2ihd_A RGS8, regulator of G-protein signaling 8; signaling protein, structural genomics, structura genomics consortium, SGC, signaling protein; 1.70A {Homo sapiens} PDB: 2ode_B* 2bt2_A

Probab=99.86  E-value=2.5e-22  Score=142.61  Aligned_cols=76  Identities=36%  Similarity=0.670  Sum_probs=71.1

Q ss_pred             CCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCC
Q psy1257          50 DPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQ  123 (125)
Q Consensus        50 dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNi  123 (125)
                      .|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|+...+..++...|+.||++||+++||.+|||
T Consensus        26 ~~s~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNI  105 (155)
T 2ihd_A           26 RLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNI  105 (155)
T ss_dssp             --CHHHHHHTTSCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCC
T ss_pred             CCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCcCCCccccCC
Confidence            78899999999999      999999999999999999999999999999998777889999999999999999999999


Q ss_pred             CC
Q psy1257         124 DP  125 (125)
Q Consensus       124 d~  125 (125)
                      |+
T Consensus       106 ~~  107 (155)
T 2ihd_A          106 DF  107 (155)
T ss_dssp             CH
T ss_pred             CH
Confidence            84

>2jm5_A RGS18, regulator of G-protein signaling 18; signaling protein, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} SCOP: a.91.1.1 PDB: 2owi_A

Probab=99.86  E-value=2.3e-22  Score=141.97  Aligned_cols=76  Identities=46%  Similarity=0.724  Sum_probs=72.1

Q ss_pred             CCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCC
Q psy1257          50 DPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQ  123 (125)
Q Consensus        50 dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNi  123 (125)
                      .|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|+...+..++...|+.||++||+++||.+|||
T Consensus         2 ~~~~~~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi   81 (151)
T 2jm5_A            2 MVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNL   81 (151)
T ss_dssp             CCCHHHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTTCSSSSSCCCC
T ss_pred             CCCHHHHHHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHccCcchhhcCC
Confidence            47888999999999      999999999999999999999999999999998877889999999999999999999999


Q ss_pred             CC
Q psy1257         124 DP  125 (125)
Q Consensus       124 d~  125 (125)
                      |+
T Consensus        82 ~~   83 (151)
T 2jm5_A           82 DF   83 (151)
T ss_dssp             CH
T ss_pred             CH
Confidence            84

>2ebz_A RGS12, regulator of G-protein signaling 12; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=4.5e-22  Score=140.99  Aligned_cols=76  Identities=29%  Similarity=0.528  Sum_probs=70.7

Q ss_pred             CCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHcCCCCCCcc
Q psy1257          50 DPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKES--NPDVIEEKARFIYEDYISILSPKEV  121 (125)
Q Consensus        50 dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~--~~~~~~~~a~~Iy~~yi~~~sp~ev  121 (125)
                      .|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|++..  +..++...|+.||++||+++||.+|
T Consensus         6 ~~~~~~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~~~a~~Iy~~yi~~~s~~ev   85 (155)
T 2ebz_A            6 SGRERRVASWAVSFERLLQDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATTPV   85 (155)
T ss_dssp             CSSCCCTTHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHSSSSCSSCC
T ss_pred             CCcHhHHHHHHHhHHHHHCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHcCCCCCCcc
Confidence            57889999999999      999999999999999999999999999999974  3457889999999999999999999


Q ss_pred             CCCC
Q psy1257         122 TQDP  125 (125)
Q Consensus       122 Nid~  125 (125)
                      |||+
T Consensus        86 ni~~   89 (155)
T 2ebz_A           86 NIDS   89 (155)
T ss_dssp             SSCG
T ss_pred             CCCH
Confidence            9985

>2dlr_A RGS10, regulator of G-protein signaling 10; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=2.5e-22  Score=141.33  Aligned_cols=77  Identities=39%  Similarity=0.630  Sum_probs=72.8

Q ss_pred             CCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccC
Q psy1257          49 WDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT  122 (125)
Q Consensus        49 ~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evN  122 (125)
                      -.|+.+.+.+|+.+|      |.|+.+|++||++|+|.|||.||++|+.|++..+..++...|+.||++||+++||.+||
T Consensus         5 ~~~~~~~~~~w~~sl~~iL~~~~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evN   84 (149)
T 2dlr_A            5 SSGSLKSTAKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVN   84 (149)
T ss_dssp             CCCSSCCHHHHHHCHHHHHHSHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTTSSTTCSSCCC
T ss_pred             CCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCCCcccc
Confidence            358888999999999      99999999999999999999999999999999887788999999999999999999999


Q ss_pred             CCC
Q psy1257         123 QDP  125 (125)
Q Consensus       123 id~  125 (125)
                      ||+
T Consensus        85 i~~   87 (149)
T 2dlr_A           85 VEG   87 (149)
T ss_dssp             CSC
T ss_pred             CCH
Confidence            985

>2a72_A Regulator of G-protein signalling 7; human RGS7, regulator of G-protein signaling 7, GTPase-activ proteins (GAP), structural genomics; 2.00A {Homo sapiens} PDB: 2d9j_A 2es0_A

Probab=99.86  E-value=4.1e-22  Score=139.86  Aligned_cols=76  Identities=26%  Similarity=0.508  Sum_probs=71.0

Q ss_pred             CCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccC
Q psy1257          49 WDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT  122 (125)
Q Consensus        49 ~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evN  122 (125)
                      -.|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|+.... .++...|+.||++||+++||.+||
T Consensus         3 ~~~~~~~~~~w~~sl~~iL~~p~g~~~F~~Fl~~e~~~Enl~Fw~~ve~~k~~~~-~~~~~~a~~Iy~~yi~~~s~~evN   81 (146)
T 2a72_A            3 KEPSQQRVKRWGFGMDEALKDPVGREQFLKFLESEFSSENLRFWLAVEDLKKRPI-KEVPSRVQEIWQEFLAPGAPSAIN   81 (146)
T ss_dssp             CCCCHHHHHHGGGCHHHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTSCG-GGHHHHHHHHHHHHTSTTCTTCCC
T ss_pred             CCCCHHHHHHHHhHHHHHhCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHcCCCCcccCC
Confidence            468999999999999      9999999999999999999999999999999865 467899999999999999999999


Q ss_pred             CCC
Q psy1257         123 QDP  125 (125)
Q Consensus       123 id~  125 (125)
                      ||+
T Consensus        82 i~~   84 (146)
T 2a72_A           82 LDS   84 (146)
T ss_dssp             CCH
T ss_pred             CCH
Confidence            984

>2bv1_A Regulator of G-protein signalling 1; RGS1, RGS, structural genomics, struct genomics consortium, B-cell activation, phosphorylation; 2.0A {Homo sapiens} PDB: 2gtp_C*

Probab=99.85  E-value=6.4e-22  Score=138.70  Aligned_cols=76  Identities=32%  Similarity=0.518  Sum_probs=70.8

Q ss_pred             CCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccC
Q psy1257          49 WDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT  122 (125)
Q Consensus        49 ~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evN  122 (125)
                      -.|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|++..+. ++...|+.||++||+++||.+||
T Consensus        12 ~~~~~~~~~~~~~sl~~iL~~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~-~~~~~a~~Iy~~yi~~~s~~evn   90 (145)
T 2bv1_A           12 DVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSEFSEENIEFWLACEDYKKTESD-LLPCKAEEIYKAFVHSDAAKQIN   90 (145)
T ss_dssp             EEEEHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTSCGG-GHHHHHHHHHHHHTSTTCTTCCC
T ss_pred             CCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCcH-HHHHHHHHHHHHHCCCCCCcccC
Confidence            358889999999999      99999999999999999999999999999998764 48899999999999999999999


Q ss_pred             CCC
Q psy1257         123 QDP  125 (125)
Q Consensus       123 id~  125 (125)
                      ||+
T Consensus        91 i~~   93 (145)
T 2bv1_A           91 IDF   93 (145)
T ss_dssp             CCH
T ss_pred             cCH
Confidence            984

>1agr_E RGS4; GI-alpha-1, hydrolase, signal transduction, complex (signal transduction/regulator), GTP-binding, GTPase activating protein; HET: GDP CIT; 2.80A {Rattus norvegicus} SCOP: a.91.1.1 PDB: 1ezt_A 1ezy_A

Probab=99.83  E-value=3.2e-21  Score=142.95  Aligned_cols=77  Identities=39%  Similarity=0.679  Sum_probs=71.2

Q ss_pred             CCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccC
Q psy1257          49 WDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVT  122 (125)
Q Consensus        49 ~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evN  122 (125)
                      ..|+.+.+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|+...+..++...|+.||++||+++||.+||
T Consensus        49 ~~~s~~~~~~w~~sle~IL~dp~g~~~F~~FL~~e~s~EnL~Fw~ave~yk~~~~~~~~~~~A~~Iy~~YI~~~Sp~evN  128 (205)
T 1agr_E           49 QRVSQEEVKKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVN  128 (205)
T ss_dssp             --CCHHHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHCCCTTTHHHHHHHHHHHHTSTTCTTCCC
T ss_pred             CCCCHHHHHHHHhhHHHHhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCchhhh
Confidence            478999999999999      99999999999999999999999999999998765678899999999999999999999


Q ss_pred             CCC
Q psy1257         123 QDP  125 (125)
Q Consensus       123 id~  125 (125)
                      ||+
T Consensus       129 I~~  131 (205)
T 1agr_E          129 LDS  131 (205)
T ss_dssp             CCH
T ss_pred             ccH
Confidence            984

>1dk8_A Axin; alpha-helix, PI-helix, signaling protein; HET: SO4; 1.57A {Homo sapiens} SCOP: a.91.1.1 PDB: 1emu_A

Probab=99.83  E-value=2.7e-21  Score=135.46  Aligned_cols=71  Identities=32%  Similarity=0.476  Sum_probs=66.2

Q ss_pred             hhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcC----CCHHHHHHHHHHHHHHHc-CCCCCCccCC
Q psy1257          55 YTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKE----SNPDVIEEKARFIYEDYI-SILSPKEVTQ  123 (125)
Q Consensus        55 ~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~----~~~~~~~~~a~~Iy~~yi-~~~sp~evNi  123 (125)
                      .+.+|+.+|      |.|+.+|++||++|+|+|||.||++|++|++.    .+...+...|+.||++|| .++||.+|||
T Consensus         8 ~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~~~~~a~~Iy~~yi~~~~s~~~vni   87 (147)
T 1dk8_A            8 PYLKWAESLHSLLDDQDGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKYILDNNGIVSRQT   87 (147)
T ss_dssp             HHHHHHHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHCCCCTTSHHHHHHHHHHHHHHHTSCTTSHHHHHS
T ss_pred             hHHHHHhCHHHHHCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHhCCccCCCCCCC
Confidence            478999999      99999999999999999999999999999998    455678999999999999 9999999999


Q ss_pred             CC
Q psy1257         124 DP  125 (125)
Q Consensus       124 d~  125 (125)
                      |+
T Consensus        88 ~~   89 (147)
T 1dk8_A           88 KP   89 (147)
T ss_dssp             CH
T ss_pred             CH
Confidence            84

>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.81  E-value=1.2e-20  Score=152.73  Aligned_cols=103  Identities=27%  Similarity=0.425  Sum_probs=85.2

Q ss_pred             HHHHhcCccCCHHHHhHHHHHHHHHHhhChhHHHHHhh-cCCCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHH
Q psy1257          10 TVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLE-KWDPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEEN   82 (125)
Q Consensus        10 ea~~~~C~kCt~~Qk~~~~kvi~~l~~~~P~~W~~l~~-k~dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~EN   82 (125)
                      |.+.++|..=+|++.+.            +..|..... .-.|+...+.+|+.+|      |.|+.+|++||++|||+||
T Consensus       260 DPll~g~~~sNPw~~~d------------~~~w~~~~~~~~~pt~~~v~~w~~sle~LL~dp~g~~~F~~FL~~e~s~En  327 (424)
T 2pbi_A          260 DAIMSGCLPSNPWITDD------------TQFWDLNAKLVEIPTKMRVERWAFNFSELIRDPKGRQSFQYFLKKEFSGEN  327 (424)
T ss_dssp             CHHHHCCSSCCHHHHCC------------THHHHHTCTTCSSCBHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTTH
T ss_pred             CCccccCCCCCCCCCCC------------ccceeccCCCCCCCCHHHHhhhhcCHHHHHCCHHHHHHHHHHHHHhCChHH
Confidence            34445555445554443            467875442 5688989999999999      9999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCCC
Q psy1257          83 ILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP  125 (125)
Q Consensus        83 l~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid~  125 (125)
                      |.||++|++|+..++ .++...|+.||++||+++||.+||||+
T Consensus       328 L~Fwlave~fk~~~~-~~~~~~A~~Iy~~YI~~~Sp~eVNId~  369 (424)
T 2pbi_A          328 LGFWEACEDLKYGDQ-SKVKEKAEEIYKLFLAPGARRWINIDG  369 (424)
T ss_dssp             HHHHHHHHHHHHSCS-SSHHHHHHHHHHHHTSTTCTTCCCCCH
T ss_pred             HHHHHHHHHHhcCCH-HHHHHHHHHHHHHHcCCCCccccCCCH
Confidence            999999999999754 467899999999999999999999984

>3cx8_B RHO guanine nucleotide exchange factor 11; signal transduction, protein complex, GTP-binding, lipoprotein, membrane, nucleotide-binding; HET: GSP; 2.00A {Rattus norvegicus} PDB: 3cx6_B* 3cx7_B* 1htj_F

Probab=97.96  E-value=1e-05  Score=59.31  Aligned_cols=60  Identities=13%  Similarity=0.226  Sum_probs=56.4

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD  124 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid  124 (125)
                      |.-...|..|+-..+.-.-|+|++-.+-|+.... +++++.|..||.+||.++||..|+++
T Consensus        33 PAHLavFL~yvlsq~dP~~LlfyL~~d~yk~~~~-Ke~rk~a~ei~stFL~~~ApL~v~vp   92 (203)
T 3cx8_B           33 PAYLVVFLRYILSQADPGPLLFYLCSEVYQQTNP-KDSRSLGKDIWNIFLEKNAPLRVKIP   92 (203)
T ss_dssp             HHHHHHHHHHHHHHSCSHHHHHHHHHHHHHTSCT-TTCHHHHHHHHHHHTSTTCTTCCCCC
T ss_pred             cHHHHHHHHHHHhcCCchHHHHHHHHHHHhccCh-HHHHHHHHHHHHHHhcCCCCccccCC
Confidence            8889999999999999999999999999999865 57899999999999999999999986

>1iap_A Guanine nucleotide exchange factor P115rhogef; RGS, RGRGS, signaling protein; 1.90A {Homo sapiens} SCOP: a.91.1.1

Probab=97.77  E-value=5.4e-05  Score=55.68  Aligned_cols=60  Identities=10%  Similarity=0.123  Sum_probs=56.0

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD  124 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid  124 (125)
                      |+-...|..|+-..+.---|+|++-.+-|+.+. ..++++.|.+||.+||-++||.-||+|
T Consensus        15 PAHLaVFL~yV~sq~DPspLLfYL~tdlYk~~~-~Ke~rk~~~Ei~stFL~~~ApL~v~v~   74 (211)
T 1iap_A           15 PAHLMALLQHVALQFEPGPLLCCLHADMLGSLG-PKEAKKAFLDFYHSFLEKTAVLRVPVP   74 (211)
T ss_dssp             HHHHHHHHHHHHHHSCSHHHHHHHHHHHHTTSC-HHHHHHHHHHHHHHHTSTTCTTCCCCC
T ss_pred             cHHHHHHHHHHHHcCCchhhHHHHHHHHHhccC-hHHHHHHHHHHHHHHhCCCCCccccCC
Confidence            777899999999999999999999999999886 468999999999999999999999986

>3ab3_B RHO guanine nucleotide exchange factor 1; signal transduction, protein complex, GTP-binding, membrane, transducer, lipoprotein, nucleotide-binding; HET: GDP; 2.40A {Homo sapiens} PDB: 1shz_C*

Probab=97.40  E-value=8.4e-05  Score=55.73  Aligned_cols=60  Identities=8%  Similarity=0.076  Sum_probs=51.3

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD  124 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid  124 (125)
                      |+-...|..|+-..+.---|+|++-.+-|+.... +++++.|.+||.+||-++||.-||+|
T Consensus        69 PAHLaVFL~yV~sq~DPspLLfYL~tdlYk~~~~-Ke~Rk~a~Ei~stFL~~~ApL~v~v~  128 (246)
T 3ab3_B           69 PAHLMALLQHVALQFEPGPLLCCLHADMLGSLGP-KEAKKAFLDFYHSFLEKTAVLRVPVP  128 (246)
T ss_dssp             HHHHHHHHHHHHHHSCSHHHHHHHHHHHHC--------CCTTHHHHHHTTSTTCTTCCCCC
T ss_pred             chHHHHHHHHHHhcCCchhhHHHHHHHHHhccCh-HHHHHHHHHHHHHHcCCCCCccccCC
Confidence            8889999999999999999999999999999875 57899999999999999999999987

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=96.53  E-value=0.0048  Score=51.33  Aligned_cols=56  Identities=18%  Similarity=0.212  Sum_probs=47.0

Q ss_pred             cccHHHHHHHHHHh-hcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCc
Q psy1257          64 GDTYKLFREFLRCE-YSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKE  120 (125)
Q Consensus        64 ~~g~~~F~~FL~~e-~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~e  120 (125)
                      |.|+.+|++||.+. --..-+.||.++++|....+ +++...|+.|+++|+.+.|+..
T Consensus        61 ~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  117 (576)
T 2acx_A           61 PIGRLLFREFCATRPELSRCVAFLDGVAEYEVTPD-DKRKACGRNLTQNFLSHTGPDL  117 (576)
T ss_dssp             HHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHTSCT-TTHHHHHHHHHHHHSCSSSCCS
T ss_pred             chhHHHHHHHHhcCcchhHHHHHHHHHHhhhcccc-hhHHHHHHHHHHHhcCcccccc
Confidence            99999999999966 23334589999999999766 4678999999999999998763

>4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica}

Probab=96.51  E-value=0.0058  Score=47.35  Aligned_cols=58  Identities=28%  Similarity=0.363  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHhhcHHHHHHHHHHHHhhcCCC---HHHHHHHHHHHHHHHcCCCCCCccCCC
Q psy1257          67 YKLFREFLRCEYSEENILFWLACEDLKKESN---PDVIEEKARFIYEDYISILSPKEVTQD  124 (125)
Q Consensus        67 ~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~---~~~~~~~a~~Iy~~yi~~~sp~evNid  124 (125)
                      ..+.+-||..|-|+|||+|...+--|...-+   ...+.+...-|-+.|+.-+|.++||++
T Consensus        26 krllrcylsderseenldflesvglyesqfdkltpkvrlealnfikdqfldrnserqvnls   86 (518)
T 4gou_A           26 KRLLRCYLSDERSEENLDFLESVGLYESQFDKLTPKVRLEALNFIKDQFLDRNSERQVNLS   86 (518)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSTTCTTCCCCC
T ss_pred             HHHHHHHcccccchhhhhHHHhccchHhhhhhcCchhhHHHHHhHHHHhhcccchhhcchh
Confidence            4677889999999999999999887765432   234456677899999999999999986

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=96.18  E-value=0.0046  Score=52.68  Aligned_cols=54  Identities=20%  Similarity=0.283  Sum_probs=45.6

Q ss_pred             cccHHHHHHHHHHhh--cHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCC
Q psy1257          64 GDTYKLFREFLRCEY--SEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILS  117 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~--s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~s  117 (125)
                      |.|+.+|+.||...-  --.=+.||.+++.|....+.+.+...++.||++||.+.+
T Consensus        62 ~ig~~~f~~f~~~~~~~~~~~~~~~~~v~~~~~~~~~~~r~~~~~~i~~~~~~~~~  117 (689)
T 3v5w_A           62 KLGYLLFRDFCLNHLEEARPLVEFYEEIKKYEKLETEEERVARSREIFDSYIMKEL  117 (689)
T ss_dssp             HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTSHHHHHH
T ss_pred             cHHHHHHHHHhcCcchhhhHHHHHHHHHHhhhccCchhhHHHHHHHHHHHhcchhh
Confidence            899999999976543  333589999999999888878889999999999998654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=86.06  E-value=2.6  Score=34.44  Aligned_cols=55  Identities=20%  Similarity=0.351  Sum_probs=44.6

Q ss_pred             cccHHHHHHHHHHhhcH-HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCC
Q psy1257          64 GDTYKLFREFLRCEYSE-ENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPK  119 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~-ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~  119 (125)
                      |.|..+|..||.+.+.- .-..||-.++.|....+ ......|+.|++.|+..++..
T Consensus        66 ~ig~~~~~~f~~t~~~~~~~~~~~~~i~e~~~~~~-~~~~~~~~~l~~~~~~~~~~d  121 (543)
T 3c4z_A           66 PIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADD-ALRPQKAQALRAAYLEPQAQL  121 (543)
T ss_dssp             HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTSCT-TTHHHHHHHHHHHHTSTTCTT
T ss_pred             cccHHHHHHHHhcCCchhHHHHHHhhhhhhccCch-hhHHHHHHHHHHHhhCchhhh
Confidence            67999999999988432 22479999999997654 456888999999999999865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	125
d1n8va_	101	a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage	2e-16
d2jm5a1	132	a.91.1.1 (A:3-134) Regulator of G-protein signalin	3e-14
d2ik8b1	116	a.91.1.1 (B:65-180) Regulator of G-protein signali	1e-13
d1agre_	128	a.91.1.1 (E:) Regulator of G-protein signaling 4,	2e-13
d1cmza_	128	a.91.1.1 (A:) Galpha interacting protein, GaIP {Hu	3e-13
d1dk8a_	147	a.91.1.1 (A:) Axin RGS-homologous domain {Human (H	5e-12
d1omwa1	157	a.91.1.1 (A:29-185) G-protein coupled receptor kin	6e-12
d1fqia_	138	a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [	4e-11
d1htjf_	182	a.91.1.1 (F:) Pdz-RhoGEF RGS-like domain {Human (H	2e-10

>d1n8va_ a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage moth (Mamestra brassicae) [TaxId: 55057]} Length = 101

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Chemosensory protein Csp2
family: Chemosensory protein Csp2
domain: Chemosensory protein Csp2
species: Cabbage moth (Mamestra brassicae) [TaxId: 55057]

 Score = 67.4 bits (165), Expect = 2e-16
 Identities = 20/60 (33%), Positives = 36/60 (60%)

Query: 3  ECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEK 62
          E +E++   ++  C+KCT +Q   A  VI  L K+  E W+ L  K+DP G + +K++++
Sbjct: 40 ELKEHLQDAIENGCKKCTENQEKGAYRVIEHLIKNEIEIWRELTAKYDPTGNWRKKYEDR 99

>d2jm5a1 a.91.1.1 (A:3-134) Regulator of G-protein signaling 18, RGS18 {Human (Homo sapiens) [TaxId: 9606]} Length = 132

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 18, RGS18
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 3e-14
 Identities = 31/61 (50%), Positives = 38/61 (62%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           D  + F  FL+ E+SEENI FW+ACED KK   P  I  KA+ IYE +I   +PKEV  D
Sbjct: 21  DGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLD 80

Query: 125 P 125
            
Sbjct: 81  F 81

>d2ik8b1 a.91.1.1 (B:65-180) Regulator of G-protein signaling 16, RGS16 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 16, RGS16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 1e-13
 Identities = 25/61 (40%), Positives = 37/61 (60%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
           +    F  FL+ E+SEEN+ FWLACE+ KK  +   +  +A  I+E++I   +PKEV  D
Sbjct: 10  NGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEEFICSEAPKEVNID 69

Query: 125 P 125
            
Sbjct: 70  H 70

>d1agre_ a.91.1.1 (E:) Regulator of G-protein signaling 4, RGS4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 128

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 4, RGS4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.4 bits (146), Expect = 2e-13
 Identities = 27/61 (44%), Positives = 39/61 (63%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
                F+ FL+ EYSEENI FW++CE+ KK  +P  +  KA+ IY ++IS+ + KEV  D
Sbjct: 21  CGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLD 80

Query: 125 P 125
            
Sbjct: 81  S 81

>d1cmza_ a.91.1.1 (A:) Galpha interacting protein, GaIP {Human (Homo sapiens) [TaxId: 9606]} Length = 128

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Galpha interacting protein, GaIP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 3e-13
 Identities = 41/61 (67%), Positives = 49/61 (80%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
               +FR FLR EYSEEN+LFWLACE+LK E+N  V++EKAR IYEDY+SILSPKEV+ D
Sbjct: 21  AGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLD 80

Query: 125 P 125
            
Sbjct: 81  S 81

>d1dk8a_ a.91.1.1 (A:) Axin RGS-homologous domain {Human (Homo sapiens) [TaxId: 9606]} Length = 147

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Axin RGS-homologous domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 5e-12
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEK----ARFIYEDYISILSPKE 120
           D   LFR FL+ E   + + FW AC   +K    D  EEK    AR IY  YI   +   
Sbjct: 24  DGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKYILDNNGIV 83

Query: 121 VTQ 123
             Q
Sbjct: 84  SRQ 86

>d1omwa1 a.91.1.1 (A:29-185) G-protein coupled receptor kinase 2, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 157

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: G-protein coupled receptor kinase 2, N-terminal domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.9 bits (137), Expect = 6e-12
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 43  KILLEKWDPKGEYTRKFQEKFGDTYKLFREFLRCEYSEE--NILFWLACEDLKKESNPDV 100
           K L ++ +    + + F +K G  Y LFR+F      E    + F+   +  +K    + 
Sbjct: 17  KYLEDRGE--VTFEKIFSQKLG--YLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEE 72

Query: 101 IEEKARFIYEDYISILSPKEVTQ 123
               +R I++ YI          
Sbjct: 73  RLVCSREIFDTYIMKELLACSHP 95

>d1fqia_ a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]} Length = 138

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: RGS9, RGS domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.6 bits (131), Expect = 4e-11
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 65  DTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD 124
              + F+ FLR E+S EN+ FW ACEDLK   +   ++EKA  IY+ +++  + + +  D
Sbjct: 26  KGRQSFQHFLRKEFSGENLGFWEACEDLKY-GDQSKVKEKAEEIYKLFLAPGARRWINID 84

Query: 125 P 125
            
Sbjct: 85  G 85

>d1htjf_ a.91.1.1 (F:) Pdz-RhoGEF RGS-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 182

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Pdz-RhoGEF RGS-like domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (128), Expect = 2e-10
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 70  FREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP 125
           F  ++  +     +LF+L  E  ++ ++P       + I+  ++   +P  V    
Sbjct: 22  FLRYIFSQADPSPLLFYLCAEVYQQ-ASPKDSRSLGKDIWNIFLEKNAPLRVKIPE 76

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	125
d1n8va_	101	Chemosensory protein Csp2 {Cabbage moth (Mamestra	99.89
d1cmza_	128	Galpha interacting protein, GaIP {Human (Homo sapi	99.84
d1agre_	128	Regulator of G-protein signaling 4, RGS4 {Rat (Rat	99.83
d1fqia_	138	RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]}	99.82
d1htjf_	182	Pdz-RhoGEF RGS-like domain {Human (Homo sapiens) [	99.8
d2jm5a1	132	Regulator of G-protein signaling 18, RGS18 {Human	99.78
d2ik8b1	116	Regulator of G-protein signaling 16, RGS16 {Human	99.77
d1omwa1	157	G-protein coupled receptor kinase 2, N-terminal do	99.74
d1dk8a_	147	Axin RGS-homologous domain {Human (Homo sapiens) [	99.69
d1iapa_	190	p115RhoGEF {Human (Homo sapiens) [TaxId: 9606]}	97.85

>d1n8va_ a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage moth (Mamestra brassicae) [TaxId: 55057]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Chemosensory protein Csp2
family: Chemosensory protein Csp2
domain: Chemosensory protein Csp2
species: Cabbage moth (Mamestra brassicae) [TaxId: 55057]

Probab=99.89  E-value=5.8e-24  Score=140.22  Aligned_cols=61  Identities=33%  Similarity=0.669  Sum_probs=58.7

Q ss_pred             hhHHhhhhHHHHhcCccCCHHHHhHHHHHHHHHHhhChhHHHHHhhcCCCCchhhhhHHhh
Q psy1257           2 SECRENIPTVLQTLCEKCTPSQTDKAVMVIRRLKKDYPEEWKILLEKWDPKGEYTRKFQEK   62 (125)
Q Consensus         2 ~~~k~~lpea~~~~C~kCt~~Qk~~~~kvi~~l~~~~P~~W~~l~~k~dP~~~~v~kw~~s   62 (125)
                      ++||++|||||+|+|++|||+||+++++||.||++++|+.|+.|..+|||+|+|+.+|+..
T Consensus        39 k~lK~~lPeal~t~C~kCT~kQK~~~~kvi~~l~~~~p~~w~~l~~KYDP~g~y~~k~~~~   99 (101)
T d1n8va_          39 KELKEHLQDAIENGCKKCTENQEKGAYRVIEHLIKNEIEIWRELTAKYDPTGNWRKKYEDR   99 (101)
T ss_dssp             HHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCTTCSSHHHHHHH
T ss_pred             HHHHHHhHHHHHccccCCCHHHHHHHHHHHHHHHHcCcHHHHHHHHHHCcCchHHHHHHHH
Confidence            6899999999999999999999999999999999999999999999999999999998753

>d1cmza_ a.91.1.1 (A:) Galpha interacting protein, GaIP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Galpha interacting protein, GaIP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.3e-21  Score=132.86  Aligned_cols=75  Identities=59%  Similarity=1.013  Sum_probs=71.1

Q ss_pred             CCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCC
Q psy1257          51 PKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD  124 (125)
Q Consensus        51 P~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid  124 (125)
                      |+.+++.+|+.||      |.|+.+|++||+.++|+|||.||++|++|++..+...+...|+.||++||+++||.+|||+
T Consensus         1 p~~~~~~~w~~sl~~iL~d~~~~~~F~~fL~~~~~~e~l~Fw~~ve~fk~~~~~~~~~~~a~~Iy~~yi~~~s~~~~~i~   80 (128)
T d1cmza_           1 PSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLD   80 (128)
T ss_dssp             CCHHHHHHHTTCSHHHHSSHHHHHHHHHHHHHHTCCHHHHHHHHHHHGGGTCCSHHHHHHHHHHHHHTTTCSSSCCCSCC
T ss_pred             CCHHHHHHHHhCHHHHHcChHHHHHHHHHHHHhcCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhccCCCccCCcC
Confidence            6777899999999      9999999999999999999999999999999888778889999999999999999999998


Q ss_pred             C
Q psy1257         125 P  125 (125)
Q Consensus       125 ~  125 (125)
                      +
T Consensus        81 ~   81 (128)
T d1cmza_          81 S   81 (128)
T ss_dssp             S
T ss_pred             H
Confidence            5

>d1agre_ a.91.1.1 (E:) Regulator of G-protein signaling 4, RGS4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 4, RGS4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=1.8e-21  Score=132.25  Aligned_cols=74  Identities=41%  Similarity=0.728  Sum_probs=69.7

Q ss_pred             CchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCCC
Q psy1257          52 KGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP  125 (125)
Q Consensus        52 ~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid~  125 (125)
                      +.+.+++|+.||      |.|+.+|++||++++|+|||.||++|+.|+...+..++...|+.||++||+++||.+||||+
T Consensus         2 ~~~~~~~W~~sl~~iL~d~~~~~~F~~FL~~~~~~e~l~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~~~~l~~   81 (128)
T d1agre_           2 SQEEVKKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDS   81 (128)
T ss_dssp             CHHHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHCCCTTTHHHHHHHHHHHHTSTTCTTCCCCCH
T ss_pred             CHHHHHHHHHCHHHHHCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhCCCCCcccCCCH
Confidence            467899999999      99999999999999999999999999999998777788999999999999999999999984

>d1fqia_ a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: RGS9, RGS domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.82  E-value=5.2e-21  Score=131.51  Aligned_cols=75  Identities=32%  Similarity=0.498  Sum_probs=70.0

Q ss_pred             CCCchhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCC
Q psy1257          50 DPKGEYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQ  123 (125)
Q Consensus        50 dP~~~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNi  123 (125)
                      -|+..++.+|+.||      |.|+.+|++||++++|+|||.||++|+.|+.... ..+...|..||++||+++||.+|||
T Consensus         5 ~p~~~r~~~w~~sl~~IL~d~~~~~~F~~FL~~~~~~e~l~Fw~~ve~~k~~~~-~~~~~~a~~Iy~~yi~~~s~~~vni   83 (138)
T d1fqia_           5 IPTKMRVERWAFNFSELIRDPKGRQSFQHFLRKEFSGENLGFWEACEDLKYGDQ-SKVKEKAEEIYKLFLAPGARRWINI   83 (138)
T ss_dssp             CCCHHHHHHTTTCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTSCG-GGHHHHHHHHHHHHTSTTCTTCCCC
T ss_pred             CCCHHHHHHHHhCHHHHHcChHHHHHHHHHHhHcCCHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHccccccccCC
Confidence            58999999999999      9999999999999999999999999999997654 5678999999999999999999999


Q ss_pred             CC
Q psy1257         124 DP  125 (125)
Q Consensus       124 d~  125 (125)
                      ++
T Consensus        84 ~~   85 (138)
T d1fqia_          84 DG   85 (138)
T ss_dssp             CH
T ss_pred             CH
Confidence            84

>d1htjf_ a.91.1.1 (F:) Pdz-RhoGEF RGS-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Pdz-RhoGEF RGS-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.7e-20  Score=134.14  Aligned_cols=61  Identities=15%  Similarity=0.241  Sum_probs=57.8

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCCC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP  125 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid~  125 (125)
                      |.|+..|.+||.+|||.|||+||++|+.||.++. .++++.|..||++||+++||.+||||+
T Consensus        16 p~~l~~F~~fL~sefs~enL~Fwl~~e~yk~~~~-k~~~~~a~~Iy~~FL~~~Ap~~Vnid~   76 (182)
T d1htjf_          16 PAHLGVFLRYIFSQADPSPLLFYLCAEVYQQASP-KDSRSLGKDIWNIFLEKNAPLRVKIPE   76 (182)
T ss_dssp             HHHHHHHHHHHHHHSCCHHHHHHHHHHHHTTSCT-THHHHHHHHHHHHHTSTTCTTCCCCCH
T ss_pred             hHHHHHHHHHHHHhCCchHHHHHHHHHHHhccCH-HHHHHHHHHHHHHHcCCCCCCcccCCH
Confidence            9999999999999999999999999999999775 578899999999999999999999984

>d2jm5a1 a.91.1.1 (A:3-134) Regulator of G-protein signaling 18, RGS18 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 18, RGS18
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=7.2e-20  Score=124.51  Aligned_cols=72  Identities=49%  Similarity=0.793  Sum_probs=67.9

Q ss_pred             hhhhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCCC
Q psy1257          54 EYTRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP  125 (125)
Q Consensus        54 ~~v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid~  125 (125)
                      +...+|+.||      |.|+.+|++||+.++|+|||.||++|++|++..+..++...|..||++||+++||.+|||++
T Consensus         4 ~~~~~w~~sl~~iL~d~~~~~~F~~fl~~~~~~e~l~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~~i~~~~   81 (132)
T d2jm5a1           4 EEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDF   81 (132)
T ss_dssp             HHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTTCSSSSSCCCCCH
T ss_pred             HHHHHHHHHHHHHHcChHHHHHHHHHHhHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhCCCCCCCCCCCH
Confidence            4567999999      99999999999999999999999999999999888888999999999999999999999973

>d2ik8b1 a.91.1.1 (B:65-180) Regulator of G-protein signaling 16, RGS16 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 16, RGS16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.1e-19  Score=119.45  Aligned_cols=62  Identities=40%  Similarity=0.740  Sum_probs=59.3

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCCC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQDP  125 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid~  125 (125)
                      |.|+.+|++||++++|+|||.||++|+.|+...+..++...|+.||++||+++||.+||+|+
T Consensus         9 ~~~~~~F~~FL~~~~~~e~L~Fw~~ve~~~~~~~~~~~~~~a~~Iy~~yi~~~s~~~~~~~~   70 (116)
T d2ik8b1           9 KNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEEFICSEAPKEVNIDH   70 (116)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCH
T ss_pred             hHHHHHHHHHHhHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCCCCCcCCCcH
Confidence            78999999999999999999999999999999888788999999999999999999999973

>d1omwa1 a.91.1.1 (A:29-185) G-protein coupled receptor kinase 2, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: G-protein coupled receptor kinase 2, N-terminal domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.74  E-value=1.5e-19  Score=126.91  Aligned_cols=68  Identities=19%  Similarity=0.218  Sum_probs=61.3

Q ss_pred             hhHHhhh------cccHHHHHHHHHHhhcHH--HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCC---CccCCC
Q psy1257          57 RKFQEKF------GDTYKLFREFLRCEYSEE--NILFWLACEDLKKESNPDVIEEKARFIYEDYISILSP---KEVTQD  124 (125)
Q Consensus        57 ~kw~~s~------~~g~~~F~~FL~~e~s~E--Nl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp---~evNid  124 (125)
                      ++|..+|      |.|+.+|++||++++|++  ||+||++|+.|++.++.+++...|+.||++||+++||   .+||+|
T Consensus        21 ~~~~~sf~~ll~~~iG~~lFr~FL~~e~se~~~~l~Fw~a~e~yk~~~~~~~~~~~A~~Iy~kyl~~~s~~~~~~v~~~   99 (157)
T d1omwa1          21 DRGEVTFEKIFSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKS   99 (157)
T ss_dssp             HTTCCSHHHHHTSHHHHHHHHHHHHHHCTTTHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHTHHHHHTTCCCSCHH
T ss_pred             hhccCCHHHHHcCHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcccCCcccCccCCHH
Confidence            5677777      999999999999999987  9999999999999888788999999999999999997   477764

>d1dk8a_ a.91.1.1 (A:) Axin RGS-homologous domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Axin RGS-homologous domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.2e-17  Score=115.21  Aligned_cols=67  Identities=31%  Similarity=0.451  Sum_probs=59.5

Q ss_pred             hhhHHhhh------cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCC----CHHHHHHHHHHHHHHHcCCCCCCccC
Q psy1257          56 TRKFQEKF------GDTYKLFREFLRCEYSEENILFWLACEDLKKES----NPDVIEEKARFIYEDYISILSPKEVT  122 (125)
Q Consensus        56 v~kw~~s~------~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~----~~~~~~~~a~~Iy~~yi~~~sp~evN  122 (125)
                      ..+|+.||      |.|+.+|++||++++|+|||.||++|++|++..    +..++...|+.||++||+++||..++
T Consensus         9 ~~~W~~sl~~iL~d~~~~~~F~~FL~~~~~~e~l~Fwl~ve~~k~~~~~~~~~~~~~~~A~~Iy~~yi~~~s~~~~~   85 (147)
T d1dk8a_           9 YLKWAESLHSLLDDQDGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKYILDNNGIVSR   85 (147)
T ss_dssp             HHHHHHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHCCCCTTSHHHHHHHHHHHHHHHTSCTTSHHHH
T ss_pred             hhhHHHhHHHHHcChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhccCCccccc
Confidence            33799999      999999999999999999999999999999863    34567889999999999999987543

>d1iapa_ a.91.1.1 (A:) p115RhoGEF {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: p115RhoGEF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=1.6e-05  Score=56.13  Aligned_cols=60  Identities=8%  Similarity=0.076  Sum_probs=55.0

Q ss_pred             cccHHHHHHHHHHhhcHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCCCCCCccCCC
Q psy1257          64 GDTYKLFREFLRCEYSEENILFWLACEDLKKESNPDVIEEKARFIYEDYISILSPKEVTQD  124 (125)
Q Consensus        64 ~~g~~~F~~FL~~e~s~ENl~Fw~a~e~~k~~~~~~~~~~~a~~Iy~~yi~~~sp~evNid  124 (125)
                      |+-...|..|+-..+.---|+||+-.+-|+.+.. +++++.|.+||.+||.++||.-|++|
T Consensus        13 PAHLaVFL~yv~sq~DPspLLfyL~td~yk~~~~-Kd~rk~~~Ei~stFL~~~ApL~v~v~   72 (190)
T d1iapa_          13 PAHLMALLQHVALQFEPGPLLCCLHADMLGSLGP-KEAKKAFLDFYHSFLEKTAVLRVPVP   72 (190)
T ss_dssp             HHHHHHHHHHHHHHSCSHHHHHHHHHHHHTTSCH-HHHHHHHHHHHHHHTSTTCTTCCCCC
T ss_pred             hHHHHHHHHHHHhcCCchhhHHHHHHHHHhccCh-HHHHHHHHHHHHHHcCCCCCccccCc
Confidence            7778999999999998899999999999998664 68899999999999999999999876